BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016231
(393 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224138160|ref|XP_002326533.1| predicted protein [Populus trichocarpa]
gi|222833855|gb|EEE72332.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/391 (53%), Positives = 254/391 (64%), Gaps = 71/391 (18%)
Query: 3 DKKKSEDNNISAPSSIFTTLFGGIPNESTVASSLFSDSNPFKRQHRESQSAENESIFNPM 62
D ++++ SA S +F TLF G +++ SSLFSDSNPFKR+ + +S EN S
Sbjct: 10 DTSTAQNHTASALSDVFQTLFSGA-DQTASTSSLFSDSNPFKRKPEDPKSNENPST---- 64
Query: 63 NSDSLDSNNSE-LKKIKKTRQEKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGFEPN 121
+ D+ N E +K+KK + E PN LGFEP
Sbjct: 65 DVDTQKPNFYETTEKLKKVKTENPN-----------------------------LGFEP- 94
Query: 122 GTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEKKY 181
KE + G KKRKRDD+E++Y KKY
Sbjct: 95 --------KEEETLRGR--------------------------KKRKRDDLEREYEAKKY 120
Query: 182 GVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKT 241
G + EE V VG KRK D + D+LV ++ EGFDDE KLLRT+FVGNLPLKVKKKT
Sbjct: 121 GPVVDNEENASVVVGAKRKNTD-DAADVLVSKESEGFDDESKLLRTVFVGNLPLKVKKKT 179
Query: 242 LIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL 301
LIKEF KFG+++SVRIRSVPI ++KIPRKGAIL K+ N+N DSVHAY+VFK+EQS EA+L
Sbjct: 180 LIKEFSKFGDVESVRIRSVPIAESKIPRKGAILLKKFNDNVDSVHAYVVFKNEQSAEASL 239
Query: 302 AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN 361
+ NMAV+GGNHIR+DRACPPRKKLKG DAPLYD K+TVFVGNLPFDVKDEE+YQLF G+
Sbjct: 240 SHNMAVVGGNHIRVDRACPPRKKLKGSDAPLYDNKRTVFVGNLPFDVKDEELYQLFTGIK 299
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
DL SS+EAVRVIR PH+ +GKGIAYVLFKTR
Sbjct: 300 DLASSIEAVRVIRDPHVGLGKGIAYVLFKTR 330
>gi|224071371|ref|XP_002303427.1| predicted protein [Populus trichocarpa]
gi|222840859|gb|EEE78406.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 212/387 (54%), Positives = 253/387 (65%), Gaps = 67/387 (17%)
Query: 7 SEDNNISAPSSIFTTLFGGIPNESTVASSLFSDSNPFKRQHRESQSAENESIFNPMNSDS 66
++ N +SA S IF LF G N++ SLF+DSNPFKR+ + +S EN S N+D
Sbjct: 14 TQKNIVSASSDIFKFLFSGA-NQTAATFSLFTDSNPFKRKPDDPKSNENPS----ANADI 68
Query: 67 LDSN-NSELKKIKKTRQEKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGFEPNGTIE 125
D N N K+KK + + NP+ LG EP
Sbjct: 69 QDPNFNGTAMKLKKVKTQ--NPN---------------------------LGLEPK---- 95
Query: 126 NEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIA 185
E LN +K KKRKRDD+E +Y KKYG +
Sbjct: 96 ------------EEKTLN---------------ESGRKRKKRKRDDLESEYEAKKYGPVV 128
Query: 186 KEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKE 245
EE +V VG KRKKAD + D+LV ++ EGFDDE KLLRT+FVGNLPLKVKKK LIKE
Sbjct: 129 NNEENVRVVVGAKRKKAD-DAADVLVSKEGEGFDDERKLLRTVFVGNLPLKVKKKALIKE 187
Query: 246 FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNM 305
F KFGE++S+RIRS+PI ++KIPRKGAIL K+ N+NADSVHAYIVF +EQS EA+L NM
Sbjct: 188 FSKFGEVESLRIRSMPITESKIPRKGAILLKKFNDNADSVHAYIVFNTEQSAEASLTHNM 247
Query: 306 AVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
AV+GGNHIR+DRACPPRKKLKG DAPLYD K+TVFVGNLPFDVKDEEIYQLF G+ DL S
Sbjct: 248 AVVGGNHIRVDRACPPRKKLKGSDAPLYDNKRTVFVGNLPFDVKDEEIYQLFTGIKDLAS 307
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTR 392
S+EAVRVIRHPH+ +GKGIAYVLFKTR
Sbjct: 308 SIEAVRVIRHPHIGLGKGIAYVLFKTR 334
>gi|255573457|ref|XP_002527654.1| RNA binding protein, putative [Ricinus communis]
gi|223532959|gb|EEF34725.1| RNA binding protein, putative [Ricinus communis]
Length = 830
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 166/224 (74%), Positives = 192/224 (85%), Gaps = 1/224 (0%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKE-EGFDDEGKLLRTI 228
DD+E +Y KKYG V VGEKRKKA+N EDMLV ++ EGFDDE KLLRT+
Sbjct: 106 DDIESEYEAKKYGSPEVSRNAVVVAVGEKRKKAENAEEDMLVSKEGGEGFDDESKLLRTV 165
Query: 229 FVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAY 288
FVGNLPLK+KKKTL+KEF +FGEIDSVRIRSVPI+DTKIPRKGA++ K+IN++ADSVHAY
Sbjct: 166 FVGNLPLKMKKKTLVKEFSQFGEIDSVRIRSVPIVDTKIPRKGAVILKKINDSADSVHAY 225
Query: 289 IVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDV 348
IVFK+EQS EA+LA NMAVIGGNHIR+DRACPPRKKLKGE PLYD K+T+FVGNLPFDV
Sbjct: 226 IVFKTEQSAEASLANNMAVIGGNHIRVDRACPPRKKLKGEATPLYDNKRTLFVGNLPFDV 285
Query: 349 KDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
KDEEIYQLF G+ DLESS+EAVRVIR ++ +G+GIAYVLFKTR
Sbjct: 286 KDEEIYQLFSGIKDLESSIEAVRVIRDSYVGLGRGIAYVLFKTR 329
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 12 ISAPSSIFTTLFGGIPNESTVASSLFSDSNPFKRQHRE 49
+S PS+IF TLFG + + + A ++FSDSNPFKR+ E
Sbjct: 22 VSIPSNIFKTLFGDVVEQKS-ALAIFSDSNPFKRKSNE 58
>gi|356529724|ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
Length = 519
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 204/395 (51%), Positives = 263/395 (66%), Gaps = 51/395 (12%)
Query: 4 KKKSEDNNISAPSSIFTTLFGGIPNESTV--ASSLFSDSNPFKRQHRESQSAENESIFNP 61
++ S+ + +S PSSIF+ LF P +T A+SLFSD NPF+R+ + N + NP
Sbjct: 10 QQSSQTDTVSTPSSIFSKLFAIAPERTTATTAASLFSDDNPFRRKPTPLSDSTNRTQ-NP 68
Query: 62 MNSD---SLDSNNSELKKIKKTRQEK-PNPDLPDAEGAATKTLSLSNKSTKLIYPRSILG 117
+ D + DS + +K K + +K P P A + S+KS K
Sbjct: 69 NDGDHPVNTDSGEEKKRKRNKEKTDKTPAP----AIDTVVSVIEASDKSEK--------- 115
Query: 118 FEPNGTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYV 177
K++ S+ G + + +E +KRKR +VEKD+
Sbjct: 116 -----------KRKRDSDEGKDLIVG---------------AEASGKRKRKRGEVEKDWE 149
Query: 178 EKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKV 237
EKKYG++ + E K VG+ KRK D+ DM+V + EGFDDE KLLRT+FVGNLPLKV
Sbjct: 150 EKKYGIVEEGLENKTVGI--KRKTLDDPA-DMMVSK--EGFDDEDKLLRTVFVGNLPLKV 204
Query: 238 KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQST 297
KKKTL+KEF KFGE++SVRIRSVPI DTK PRKGAIL K+IN+ ADSVHAYIVFK+EQS
Sbjct: 205 KKKTLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILAKKINDAADSVHAYIVFKTEQSA 264
Query: 298 EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF 357
+A+L+ NM+++ GNHIR+DRACPPRKK KGE PLYD K+TVFVGNLPFDVKDEE+YQLF
Sbjct: 265 QASLSHNMSLVEGNHIRVDRACPPRKKHKGESTPLYDDKRTVFVGNLPFDVKDEELYQLF 324
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
CG+++LESS+EAVRV+R PH+ VGKGIAYVLFKT+
Sbjct: 325 CGISNLESSIEAVRVVRDPHLNVGKGIAYVLFKTK 359
>gi|225427165|ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266124 [Vitis vinifera]
Length = 541
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 212/403 (52%), Positives = 274/403 (67%), Gaps = 36/403 (8%)
Query: 2 MDKKKSEDNNISAPSS--IFTTLFGGIPNESTVASSLFSDSNPFKRQHRESQSAENESIF 59
M KKK +D P S +F TLFG +P + + SLFSDSNPF+R + S S++
Sbjct: 1 MGKKKPKD-----PESGDVFKTLFGYLPKDDASSRSLFSDSNPFRR--KPSLSSQTLPFE 53
Query: 60 NPMNSDSLDSNNSELKKIKKTRQ-EKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGF 118
NP DS E+KK K+T + ++ + L DA A +K+ KL P LG
Sbjct: 54 NPSIPDS------EVKKRKRTEETDETSQTLEDAPKAQHLVEPKKSKNDKLRNPN--LGS 105
Query: 119 EPNGTIENEIKKEHSS---NVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKR-----D 170
E N + N + + + + N G L + N N E K+ +++K K++K+ D
Sbjct: 106 ESNEELLNSVSESNKTLKKNKGKYIILGSE-GNPNSGSEVKEMVDSEKGKEKKKKKRKRD 164
Query: 171 DVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFV 230
++E++Y + YG +AK E GVGEKRK N E MLV + EGFDDE KLLRT+FV
Sbjct: 165 EIEEEYEAQHYGTVAKVE-----GVGEKRKSVVNPAE-MLVSK--EGFDDESKLLRTVFV 216
Query: 231 GNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIV 290
GNLPLK+KKK L+KEF FGE+ SVRIRSVPI+D+K PRKGAI+ K+IN++ DSVHAYIV
Sbjct: 217 GNLPLKIKKKALLKEFSVFGEVQSVRIRSVPILDSKKPRKGAIISKKINDSVDSVHAYIV 276
Query: 291 FKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE-DAPLYDIKKTVFVGNLPFDVK 349
FK+E+S + +L+ NM+VIGGNHIR+DRACPPRKKLKGE DA LYD K+TVFVGNLPFDVK
Sbjct: 277 FKTEESAQTSLSHNMSVIGGNHIRVDRACPPRKKLKGENDASLYDNKRTVFVGNLPFDVK 336
Query: 350 DEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
EEIYQLFCG++ LESS+EAVRV+R+PH VGKGIAY+LFKT+
Sbjct: 337 AEEIYQLFCGIDSLESSIEAVRVVRNPHTSVGKGIAYILFKTK 379
>gi|356496350|ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
Length = 515
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/394 (51%), Positives = 262/394 (66%), Gaps = 53/394 (13%)
Query: 4 KKKSEDNNISAPSSIFTTLFGGIPNESTV--ASSLFSDSNPFKRQHRESQSAENESIFNP 61
++ SE + +S PSSIF+ LF P ++T A+SLFSD NPF+R+ + N + NP
Sbjct: 10 QQSSETDAVSTPSSIFSKLFANAPEQTTATAAASLFSDDNPFRRKSAPLSYSTNRTQ-NP 68
Query: 62 MNSD---SLDSNNSELKKIKKTRQEKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGF 118
N D + DS+ + +K K + P PD + +I P
Sbjct: 69 NNGDHPVNTDSSEEKKRKRTKDKTSAPAPD-----------------TVSVIEPLE---- 107
Query: 119 EPNGTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVE 178
EP + + + +VG+E+ R KRKRD+VEK++ E
Sbjct: 108 EPGKKRKRDSDEGKDLSVGAEAIGKR---------------------KRKRDEVEKEWEE 146
Query: 179 KKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVK 238
KKYG + + E K VG+ KRK D+ DM+V + EGFD+E KLLRT+FVGNLPLKVK
Sbjct: 147 KKYGAVEEGIENKTVGI--KRKTLDDPA-DMMVSK--EGFDNEDKLLRTVFVGNLPLKVK 201
Query: 239 KKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTE 298
KKTL+KEF KFGE++SVRIRSVPI DTK PRKGAIL K+IN+ ADSVHAYIVFK+EQS +
Sbjct: 202 KKTLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILAKKINDAADSVHAYIVFKTEQSAQ 261
Query: 299 AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC 358
A+LA NM+++ GNHIR+DRACPPRKK KGE PLYD K+TVFVGNLPFDVKDEE+Y+LFC
Sbjct: 262 ASLAHNMSLVEGNHIRVDRACPPRKKHKGESTPLYDNKRTVFVGNLPFDVKDEELYKLFC 321
Query: 359 GLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
G+++LESS+EA+RV+R PH+ VGKGIAYVLFKT+
Sbjct: 322 GISNLESSIEAIRVVRDPHLNVGKGIAYVLFKTK 355
>gi|449462029|ref|XP_004148744.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101206555 [Cucumis sativus]
Length = 559
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 197/413 (47%), Positives = 264/413 (63%), Gaps = 50/413 (12%)
Query: 1 MMDKKKSEDNNISAPSSIFTTLFG--GIPNESTVASSLFSDSNPFKRQHRESQSAENESI 58
M + K ++ +++ S+F TLFG G+ N S+FS NPF+R+
Sbjct: 1 MGNNKITDXPTVASTFSVFDTLFGSAGVENPPV---SIFSTDNPFRRKA----------- 46
Query: 59 FNPMNSDSLDSNNSELKKIKKTRQEKPNPDLPDAEGAATKTLSLS----------NKSTK 108
SDS+ +E+ + KK + ++ DL EG T + ++
Sbjct: 47 -----SDSVPPPPAEISR-KKGKDKRVGIDLDSTEGVKTSSEIKKSKKKEKKKSLDRELD 100
Query: 109 LIYPRSILGFEPNGTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSEN----KKT 164
+ GFE G +++ KK+ + +GSE+ + EG K EN K+
Sbjct: 101 NVDDDGERGFESQGGLKDSSKKK-GTVLGSET------SEKSHGFEGSKLGENVKLMKER 153
Query: 165 KKRKRDDVEKDYVEKKYGV--IAKEE-EGKKVGVGEKRKKADNETEDMLVHRKEEGFDDE 221
KKRKRD++E++Y KKYGV +A++E EG V K++KA ++ +MLV + EGFDDE
Sbjct: 154 KKRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTK--EGFDDE 211
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTKIPRKGAILQKQIN 279
KLLRT+FVGNLPLKVKKK L KEF +FGEIDSVRIRSVPI ++K PRKGAI+ K++N
Sbjct: 212 SKLLRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLN 271
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
E ADS HAY+VFK+E+S +A+L+ NMAV GNHIR+DRACPP KKLK + P+YD K+TV
Sbjct: 272 EAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTV 331
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
FVGNLPFDVKDEE+YQLFCG++++ SSVEAVRVIR P + VGKG AYV FKTR
Sbjct: 332 FVGNLPFDVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTR 384
>gi|169219255|gb|ACA50448.1| putative RNA recognition motif-containing protein [Cucumis sativus]
Length = 566
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 259/406 (63%), Gaps = 50/406 (12%)
Query: 8 EDNNISAPSSIFTTLFG--GIPNESTVASSLFSDSNPFKRQHRESQSAENESIFNPMNSD 65
E +++ S+F TLFG G+ N S+FS NPF+R+ SD
Sbjct: 15 ETPTVASTFSVFDTLFGSAGVENPPV---SIFSTDNPFRRKA----------------SD 55
Query: 66 SLDSNNSELKKIKKTRQEKPNPDLPDAEGAATKTLSLS----------NKSTKLIYPRSI 115
S+ +E+ + KK + ++ DL EG T + ++ +
Sbjct: 56 SVPPPPAEISR-KKGKDKRVGIDLDSTEGVKTSSEIKKSKKKEKKKSLDRELDNVDDDGE 114
Query: 116 LGFEPNGTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSEN----KKTKKRKRDD 171
GFE G +++ KK+ + +GSE+ + EG K EN K+ KKRKRD+
Sbjct: 115 RGFESQGGLKDSSKKK-GTVLGSET------SEKSHGFEGSKLGENVKLMKERKKRKRDE 167
Query: 172 VEKDYVEKKYGV--IAKEE-EGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTI 228
+E++Y KKYGV +A++E EG V K++KA ++ +MLV + EGFDDE KLLRT+
Sbjct: 168 LEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTK--EGFDDESKLLRTV 225
Query: 229 FVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTKIPRKGAILQKQINENADSVH 286
FVGNLPLKVKKK L KEF +FGEIDSVRIRSVPI ++K PRKGAI+ K++NE ADS H
Sbjct: 226 FVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAADSSH 285
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+VFK+E+S A+L+ NMAV GNHIR+DRACPP KKLK + P+YD K+TVFVGNLPF
Sbjct: 286 AYVVFKTEESAWASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGNLPF 345
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
DVKDEE+YQLFCG++++ SSVEAVRVIR P + VGKG AYV FKTR
Sbjct: 346 DVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTR 391
>gi|15237960|ref|NP_199496.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|8809667|dbj|BAA97218.1| unnamed protein product [Arabidopsis thaliana]
gi|32441262|gb|AAP81806.1| At5g46840 [Arabidopsis thaliana]
gi|110736326|dbj|BAF00133.1| hypothetical protein [Arabidopsis thaliana]
gi|332008049|gb|AED95432.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 501
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/231 (68%), Positives = 191/231 (82%), Gaps = 8/231 (3%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEG 222
K KKRKRD++E +Y KKYG + E K+ VGEKRKKAD E D +V + EGFDDE
Sbjct: 115 KRKKRKRDEIENEYETKKYGSV----EMKEKKVGEKRKKAD-EVADTMVSK--EGFDDES 167
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
KLLRT+FVGNLPLKVKKK ++KEF KFGE++SVRIRSVPI+D+K RKGAI+ KQINE A
Sbjct: 168 KLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAIMLKQINEKA 227
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKG-EDAPLYDIKKTVFV 341
SVHAY+VF++EQS A+LA NM++I GNH+R+DRACPPRKK KG +D LYD K+TVF+
Sbjct: 228 SSVHAYVVFETEQSAAASLAHNMSLIDGNHVRVDRACPPRKKQKGHDDTHLYDPKRTVFM 287
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
GNLPFDVKDEE+YQLF G ++LE+S+EAVRVIR PH+ +GKGIAYVLFKTR
Sbjct: 288 GNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLNIGKGIAYVLFKTR 338
>gi|21554835|gb|AAM63703.1| unknown [Arabidopsis thaliana]
Length = 501
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/231 (67%), Positives = 190/231 (82%), Gaps = 8/231 (3%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEG 222
K KKRKRD++E +Y KYG + E K+ VGEKRKKAD E D +V + EGFDDE
Sbjct: 115 KRKKRKRDEIENEYETXKYGSV----EMKEKKVGEKRKKAD-EVADTMVSK--EGFDDES 167
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
KLLRT+FVGNLPLKVKKK ++KEF KFGE++SVRIRSVPI+D+K RKGAI+ KQINE A
Sbjct: 168 KLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAIMLKQINEKA 227
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKG-EDAPLYDIKKTVFV 341
SVHAY+VF++EQS A+LA NM++I GNH+R+DRACPPRKK KG +D LYD K+TVF+
Sbjct: 228 SSVHAYVVFETEQSAAASLAHNMSLIDGNHVRVDRACPPRKKQKGHDDTHLYDPKRTVFM 287
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
GNLPFDVKDEE+YQLF G ++LE+S+EAVRVIR PH+ +GKGIAYVLFKTR
Sbjct: 288 GNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLNIGKGIAYVLFKTR 338
>gi|326529257|dbj|BAK01022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 466
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/229 (62%), Positives = 173/229 (75%), Gaps = 2/229 (0%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKE-EGFDDEGK 223
+KRKRD+VE Y + G EEE + V ++KA ++ E + +E E FDDEGK
Sbjct: 90 RKRKRDEVEAGYERRTLGAAPAEEEVRSRPVVGAKRKATHDVEAVASGGEEDEAFDDEGK 149
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
LLRT+FVGNLPL+ KKK L KEF FG +DSVRIRSVP+ DTKIPRKGA+++ +IN++ D
Sbjct: 150 LLRTVFVGNLPLRTKKKALTKEFATFGVVDSVRIRSVPLGDTKIPRKGAVIKGKINDSVD 209
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+VHAYIVFK EQ AL+ NMA+ GNHIR+D ACPPRKKLKG D PLYD K+TVFVGN
Sbjct: 210 NVHAYIVFKDEQCARTALSHNMALFNGNHIRVDMACPPRKKLKG-DGPLYDRKRTVFVGN 268
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
LPFDVKDEE+YQLFCG + + VEA+RV+R P +GKGIAYVLFKTR
Sbjct: 269 LPFDVKDEELYQLFCGPSGPQGDVEAIRVVRDPDSSLGKGIAYVLFKTR 317
>gi|449516037|ref|XP_004165054.1| PREDICTED: RNA-binding protein 34-like [Cucumis sativus]
Length = 410
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/236 (65%), Positives = 192/236 (81%), Gaps = 7/236 (2%)
Query: 162 KKTKKRKRDDVEKDYVEKKYGV--IAKEE-EGKKVGVGEKRKKADNETEDMLVHRKEEGF 218
K+ KKRKRD++E++Y KKYGV +A++E EG V K++KA ++ +MLV + EGF
Sbjct: 2 KERKKRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTK--EGF 59
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTKIPRKGAILQK 276
DDE KLLRT+FVGNLPLKVKKK L KEF +FGEIDSVRIRSVPI ++K PRKGAI+ K
Sbjct: 60 DDESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISK 119
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
++NE ADS HAY+VFK+E+S +A+L+ NMAV GNHIR+DRACPP +KLK + P+YD K
Sbjct: 120 KLNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHEKLKVGNGPIYDPK 179
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+TVFVGNLPFDVKDEE+YQLFCG++++ SSVEAVRVIR P + VGKG AYV FKTR
Sbjct: 180 RTVFVGNLPFDVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTR 235
>gi|297794545|ref|XP_002865157.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310992|gb|EFH41416.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 509
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/231 (64%), Positives = 187/231 (80%), Gaps = 10/231 (4%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEG 222
K KKRKRD++E +Y KKYG + K++ G+K +E D +V + EGFDDE
Sbjct: 123 KRKKRKRDEIENEYETKKYGSVEKKKVGEKRKKA-------DEVADTMVSK--EGFDDES 173
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
KLLRT+FVGNLPLKVKKK ++KEF KFGE++SVRIRSVPI+D+K RKGAI+ KQINE A
Sbjct: 174 KLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAIMLKQINEKA 233
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE-DAPLYDIKKTVFV 341
SVHAY+VF++E+S EA+LA NM++I GNH+R+DRACPPRKK KG+ D LYD K+TVF+
Sbjct: 234 SSVHAYVVFETEKSAEASLAHNMSLIDGNHVRVDRACPPRKKQKGQDDTHLYDPKRTVFM 293
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
GNLPFDVKDEE+YQLF G ++LE+S+EAVRVIR PH+ +GKGIAYVLFKTR
Sbjct: 294 GNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLNIGKGIAYVLFKTR 344
>gi|145334753|ref|NP_001078722.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|222424348|dbj|BAH20130.1| AT5G46840 [Arabidopsis thaliana]
gi|332008050|gb|AED95433.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 364
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/199 (71%), Positives = 171/199 (85%), Gaps = 4/199 (2%)
Query: 195 VGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDS 254
VGEKRKKAD E D +V + EGFDDE KLLRT+FVGNLPLKVKKK ++KEF KFGE++S
Sbjct: 6 VGEKRKKAD-EVADTMVSK--EGFDDESKLLRTVFVGNLPLKVKKKVILKEFSKFGEVES 62
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
VRIRSVPI+D+K RKGAI+ KQINE A SVHAY+VF++EQS A+LA NM++I GNH+R
Sbjct: 63 VRIRSVPIVDSKRTRKGAIMLKQINEKASSVHAYVVFETEQSAAASLAHNMSLIDGNHVR 122
Query: 315 LDRACPPRKKLKG-EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
+DRACPPRKK KG +D LYD K+TVF+GNLPFDVKDEE+YQLF G ++LE+S+EAVRVI
Sbjct: 123 VDRACPPRKKQKGHDDTHLYDPKRTVFMGNLPFDVKDEEVYQLFTGKSNLENSIEAVRVI 182
Query: 374 RHPHMRVGKGIAYVLFKTR 392
R PH+ +GKGIAYVLFKTR
Sbjct: 183 RDPHLNIGKGIAYVLFKTR 201
>gi|297742077|emb|CBI33864.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/199 (71%), Positives = 170/199 (85%), Gaps = 4/199 (2%)
Query: 195 VGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDS 254
+ KRK N E MLV + EGFDDE KLLRT+FVGNLPLK+KKK L+KEF FGE+ S
Sbjct: 112 LNSKRKSVVNPAE-MLVSK--EGFDDESKLLRTVFVGNLPLKIKKKALLKEFSVFGEVQS 168
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
VRIRSVPI+D+K PRKGAI+ K+IN++ DSVHAYIVFK+E+S + +L+ NM+VIGGNHIR
Sbjct: 169 VRIRSVPILDSKKPRKGAIISKKINDSVDSVHAYIVFKTEESAQTSLSHNMSVIGGNHIR 228
Query: 315 LDRACPPRKKLKGE-DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
+DRACPPRKKLKGE DA LYD K+TVFVGNLPFDVK EEIYQLFCG++ LESS+EAVRV+
Sbjct: 229 VDRACPPRKKLKGENDASLYDNKRTVFVGNLPFDVKAEEIYQLFCGIDSLESSIEAVRVV 288
Query: 374 RHPHMRVGKGIAYVLFKTR 392
R+PH VGKGIAY+LFKT+
Sbjct: 289 RNPHTSVGKGIAYILFKTK 307
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 2 MDKKKSEDNNISAPSS--IFTTLFGGIPNESTVASSLFSDSNPFKRQHRESQSAENESIF 59
M KKK +D P S +F TLFG +P + + SLFSDSNPF+R + S S++
Sbjct: 1 MGKKKPKD-----PESGDVFKTLFGYLPKDDASSRSLFSDSNPFRR--KPSLSSQTLPFE 53
Query: 60 NPMNSDSLDSNNSELKKIKKTRQ-EKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGF 118
NP D SE+KK K+T + ++ + L DA A +K+ KL P LG
Sbjct: 54 NPSIPD------SEVKKRKRTEETDETSQTLEDAPKAQHLVEPKKSKNDKLRNPN--LGS 105
Query: 119 EPNGTIENEIKK 130
E N + N +K
Sbjct: 106 ESNEELLNSKRK 117
>gi|115456673|ref|NP_001051937.1| Os03g0854300 [Oryza sativa Japonica Group]
gi|29126350|gb|AAO66542.1| expressed protein [Oryza sativa Japonica Group]
gi|108712166|gb|ABF99961.1| RNA recognition motif, putative, expressed [Oryza sativa Japonica
Group]
gi|113550408|dbj|BAF13851.1| Os03g0854300 [Oryza sativa Japonica Group]
gi|125588687|gb|EAZ29351.1| hypothetical protein OsJ_13417 [Oryza sativa Japonica Group]
gi|215706962|dbj|BAG93422.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/229 (60%), Positives = 168/229 (73%), Gaps = 5/229 (2%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK-KADNETEDMLVHRKEEGFDDEGK 223
+KRKRD+VE + ++ G VGEKRK + +EE FDDE K
Sbjct: 68 RKRKRDEVEAGHERRRLGGAPAPPL---PVVGEKRKVPEEVAAAAGAGQEEEEAFDDESK 124
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
LLRT+FVGNLPLK K+K L KEF FGEI+SVRIRSVP+ DTKIPRKGA+++ +IN++ D
Sbjct: 125 LLRTVFVGNLPLKTKRKALTKEFAAFGEIESVRIRSVPLTDTKIPRKGAVIKGKINDSVD 184
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+VHAYIVFK EQ AAL+ NMA+ GNH+R+D ACPPRKKLKGE PLYD K+TVFVGN
Sbjct: 185 NVHAYIVFKDEQGARAALSHNMALFDGNHVRVDMACPPRKKLKGE-GPLYDRKRTVFVGN 243
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
LPFD+KDEE+YQ FCG + E VEA+RV+R P +GKGIAYVLFKTR
Sbjct: 244 LPFDIKDEEVYQKFCGSSGSEGDVEAIRVVRDPDTSLGKGIAYVLFKTR 292
>gi|125546498|gb|EAY92637.1| hypothetical protein OsI_14381 [Oryza sativa Indica Group]
Length = 441
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/229 (60%), Positives = 168/229 (73%), Gaps = 5/229 (2%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK-KADNETEDMLVHRKEEGFDDEGK 223
+KRKRD+VE + ++ G VGEKRK + +EE FDDE K
Sbjct: 68 RKRKRDEVEAGHERRRLGGAPAPPL---PVVGEKRKVPEEVAAAAGAGQEEEEAFDDESK 124
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
LLRT+FVGNLPLK K+K L KEF FGEI+SVRIRSVP+ DTKIPRKGA+++ +IN++ D
Sbjct: 125 LLRTVFVGNLPLKTKRKALTKEFAAFGEIESVRIRSVPLTDTKIPRKGAVIKGKINDSVD 184
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+VHAYIVFK EQ AAL+ NMA+ GNH+R+D ACPPRKKLKGE PLYD K+TVFVGN
Sbjct: 185 NVHAYIVFKDEQGARAALSHNMALFDGNHVRVDMACPPRKKLKGE-GPLYDRKRTVFVGN 243
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
LPFD+KDEE+YQ FCG + E VEA+RV+R P +GKGIAYVLFKTR
Sbjct: 244 LPFDIKDEEVYQKFCGSSGSEGDVEAIRVVRDPDTSLGKGIAYVLFKTR 292
>gi|242037365|ref|XP_002466077.1| hypothetical protein SORBIDRAFT_01g000750 [Sorghum bicolor]
gi|241919931|gb|EER93075.1| hypothetical protein SORBIDRAFT_01g000750 [Sorghum bicolor]
Length = 440
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/227 (63%), Positives = 172/227 (75%), Gaps = 6/227 (2%)
Query: 166 KRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLL 225
KRKRD++E E++ G A+ K VGEKRK D+ +EE FDDE KLL
Sbjct: 75 KRKRDELEAGR-ERRRGAGAE----KPPRVGEKRKAPDDAAAGAGAGEEEEEFDDESKLL 129
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLPL+ K+K L KEF FGEI+SVRIRSVP++DTK+ RKGA+LQ ++NE D+V
Sbjct: 130 RTVFVGNLPLRTKRKVLTKEFAAFGEIESVRIRSVPLVDTKLSRKGAVLQGKVNELVDNV 189
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
HAYIVFK EQS AL+ NMA+ GGNHIR+D ACPPRKKL+GE PLYD K+TVFVGNLP
Sbjct: 190 HAYIVFKDEQSARTALSHNMALFGGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVGNLP 248
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
FDVKDEE+YQ+FCG + E VEA+RVIR P +GKGIAYVLFKTR
Sbjct: 249 FDVKDEEVYQVFCGSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTR 295
>gi|226500848|ref|NP_001140275.1| uncharacterized protein LOC100272319 [Zea mays]
gi|194698806|gb|ACF83487.1| unknown [Zea mays]
gi|413932387|gb|AFW66938.1| hypothetical protein ZEAMMB73_491336 [Zea mays]
Length = 443
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/228 (61%), Positives = 171/228 (75%), Gaps = 9/228 (3%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKL 224
+KRKRD++E E++ G E + VGEKRK D+ + +E FDDE KL
Sbjct: 80 RKRKRDELEAGR-ERRRGA---ENPSR---VGEKRKAPDDAAQGAGEDEEEA-FDDESKL 131
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
LRT+FVGNLPL+ K+K LIKEF FGEI+SVRIRSVP++DTK+ R+GA+LQ ++N D+
Sbjct: 132 LRTVFVGNLPLRTKRKVLIKEFAAFGEIESVRIRSVPLVDTKLSRRGAVLQGKVNGLVDN 191
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
VHAYIVFK EQS AAL+ NMA+ GGNHIR+D ACPPRKKL+GE PLYD K+TVFVGNL
Sbjct: 192 VHAYIVFKDEQSARAALSHNMALFGGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVGNL 250
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
PFDVKDEE+YQ FC + E VEA+RVIR P +GKGIAYVLFKTR
Sbjct: 251 PFDVKDEEVYQAFCSSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTR 298
>gi|413932388|gb|AFW66939.1| hypothetical protein ZEAMMB73_491336 [Zea mays]
Length = 441
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 169/228 (74%), Gaps = 11/228 (4%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKL 224
+KRKRD++E E++ G E + VGEKRK D+ + +E FDDE KL
Sbjct: 80 RKRKRDELEAGR-ERRRGA---ENPSR---VGEKRKAPDDAAQGAGEDEEEA-FDDESKL 131
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
LRT+FVGNLPL+ K+K LIKEF FGEI+SVRIRSVP+ TK+ R+GA+LQ ++N D+
Sbjct: 132 LRTVFVGNLPLRTKRKVLIKEFAAFGEIESVRIRSVPL--TKLSRRGAVLQGKVNGLVDN 189
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
VHAYIVFK EQS AAL+ NMA+ GGNHIR+D ACPPRKKL+GE PLYD K+TVFVGNL
Sbjct: 190 VHAYIVFKDEQSARAALSHNMALFGGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVGNL 248
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
PFDVKDEE+YQ FC + E VEA+RVIR P +GKGIAYVLFKTR
Sbjct: 249 PFDVKDEEVYQAFCSSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTR 296
>gi|224033657|gb|ACN35904.1| unknown [Zea mays]
Length = 441
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 169/228 (74%), Gaps = 11/228 (4%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKL 224
+KRKRD++E E++ G E + VGEKRK D+ + +E FDDE KL
Sbjct: 80 RKRKRDELEAGR-ERRRGA---ENPSR---VGEKRKAPDDAAQGAGEDEEEA-FDDESKL 131
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
LRT+FVGNLPL+ K+K LIKEF FGEI+SVRIRSVP+ TK+ R+GA+LQ ++N D+
Sbjct: 132 LRTVFVGNLPLRTKRKVLIKEFAAFGEIESVRIRSVPL--TKLSRRGAVLQGKVNGLVDN 189
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
VHAYIVFK EQS AAL+ NMA+ GGNHIR+D ACPPRKKL+GE PLYD K+TVFVGNL
Sbjct: 190 VHAYIVFKDEQSARAALSHNMALFGGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVGNL 248
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
PFDVKDEE+YQ FC + E VEA+RVIR P +GKGIAYVLFKTR
Sbjct: 249 PFDVKDEEVYQAFCSSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTR 296
>gi|357117195|ref|XP_003560359.1| PREDICTED: RNA-binding protein 34-like [Brachypodium distachyon]
Length = 461
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 117/170 (68%), Positives = 141/170 (82%), Gaps = 1/170 (0%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
KLLRT+FVGNLPL+ KKK L KEF FGE++SVRIRSVP+ DTKIPRKGA+++ +IN+
Sbjct: 143 KLLRTVFVGNLPLRTKKKALTKEFAAFGEVESVRIRSVPLGDTKIPRKGAVIKGKINDLV 202
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+VHAYIVFK EQ AAL+ NMA+ GNHIR+D ACPPRKKL+GE PLYD K+TVFVG
Sbjct: 203 DNVHAYIVFKDEQCARAALSHNMALFNGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVG 261
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
NLPFDVKDEE+Y++FCG + + VEA+RV+R P +GKGIAYVLFKTR
Sbjct: 262 NLPFDVKDEELYKMFCGPSGPQGDVEAIRVVRDPDSSLGKGIAYVLFKTR 311
>gi|384249082|gb|EIE22564.1| hypothetical protein COCSUDRAFT_63712 [Coccomyxa subellipsoidea
C-169]
Length = 557
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII-DTKIPRKGAILQKQINEN 281
+L RT+FVGNLP+KVK K + + F ++G ++SVR+RS+P+ DTK+PR A+ ++E+
Sbjct: 236 RLRRTVFVGNLPVKVKVKLIKQTFSQYGTVESVRLRSLPLKEDTKLPRHAAVAAGAVDES 295
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIKKTVF 340
S +AY+VF S S ALA NM G HIR+DRA K G LY+ ++VF
Sbjct: 296 RGSANAYVVFSSGGSASHALAHNMREFEGRHIRVDRAAAVSKGTAGGGTQVLYESARSVF 355
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
VGNLPFD +DEE+ +LF +V AVR++R P VGKGIA+V F R
Sbjct: 356 VGNLPFDTQDEELIELFGDGKGGPGNVTAVRIVRDPKTSVGKGIAFVEFSGR 407
>gi|255074609|ref|XP_002500979.1| predicted protein [Micromonas sp. RCC299]
gi|226516242|gb|ACO62237.1| predicted protein [Micromonas sp. RCC299]
Length = 543
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 116/182 (63%), Gaps = 15/182 (8%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQINENA 282
L RT+FVGNLP+ +K K L F +FG +DSVR+R+VP+ + K+PR G ++ ++ EN
Sbjct: 216 LPRTVFVGNLPVTIKPKKLKTLFSEFGAVDSVRLRNVPVDPEGKMPRGGKVITGKLVENR 275
Query: 283 DSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKL-------KGEDAP--- 331
S +AY+VFK E+S EAA NM + G H+R+DRA P K KG +A
Sbjct: 276 KSTNAYVVFKEEKSVEAACKGMNMREVDGRHVRVDRAVAPSAKANETIAKEKGANAGGEV 335
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCG---LNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
YD +++F+GNLP+DV +E++ +LF +L +VEAVRV+R +GKGIA+VL
Sbjct: 336 AYDHTRSLFLGNLPYDVDEEDVIRLFHRSKEYPELNGAVEAVRVVRDRKTNLGKGIAFVL 395
Query: 389 FK 390
F+
Sbjct: 396 FR 397
>gi|303274408|ref|XP_003056525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462609|gb|EEH59901.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 481
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQINENADSV 285
T+FVGNLPL K K L F KFG + SVRIRSVP+ ++ K+PR I+ +++ S
Sbjct: 167 TVFVGNLPLTTKPKLLKSVFSKFGPVVSVRIRSVPVDLEGKMPRGRKIITGKLHTERKST 226
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL-YDIKKTVFVGNL 344
+AYIVFK+ S AA NM G HIR+DRA PP K + L YD + +F+GNL
Sbjct: 227 NAYIVFKNASSVMAATELNMQEFNGRHIRVDRATPPTSKGNRHGSDLAYDHSRCLFLGNL 286
Query: 345 PFDVKDEEIYQLFCG---LNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P+ V +EEI + F +L +S+EAVR++R VGKGIA VLFK
Sbjct: 287 PYAVDEEEIIRFFHRSKEYPELSNSIEAVRIVRDRKTSVGKGIALVLFK 335
>gi|449681386|ref|XP_002157256.2| PREDICTED: RNA-binding protein 34-like [Hydra magnipapillata]
Length = 360
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 108/173 (62%), Gaps = 18/173 (10%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D +L RTIFVGN+ LKV +K + K F KFG I+++RIRSVP+ ++K+P+K A+LQK+ +
Sbjct: 97 DPERLSRTIFVGNVSLKVTRKDIKKLFAKFGNIETIRIRSVPVAESKLPKKVALLQKKFH 156
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+ DS++AY+VFK + S E AL N ++ G H+R+D+A D D K +
Sbjct: 157 KERDSMNAYVVFKEKSSAEKALESNGYLLEGLHLRVDKA----------DFQKVDQKLCL 206
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
FVGNLPF + DEE+ F CG +E +R+IR +GKG YV FK
Sbjct: 207 FVGNLPFSLSDEELRSHFKDCGW------IEDIRIIRDKATGLGKGFGYVRFK 253
>gi|452824970|gb|EME31969.1| nucleolar RNA-binding protein [Galdieria sulphuraria]
Length = 254
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 107/168 (63%), Gaps = 14/168 (8%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
+L RTIFVGN+PL+ +++ LIK F G I+SVR RS+P+ + K+P++ A+L +
Sbjct: 21 RLARTIFVGNVPLQTRREKLIKFFKNCGPIESVRFRSIPVKNVKLPKRAAVLSGERLPER 80
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
DS++AY+VF+++ + + AL+ N +V H+++DR ++ P + +FVG
Sbjct: 81 DSMNAYVVFENKVAVDIALSLNGSVFQNKHLKIDR----------DERPTVSVGYCIFVG 130
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
NLPFDV+DE++Y++F + SV+ VR++R H GKG YV FK
Sbjct: 131 NLPFDVEDEQVYEVFSKI----GSVKYVRIVRDKHTGFGKGFGYVCFK 174
>gi|405973847|gb|EKC38537.1| Serine/threonine-protein kinase PAK 6 [Crassostrea gigas]
Length = 1486
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 17/175 (9%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D K +TIFVGNLP+ KK L K F KFG I++VR+R VP DTK+P++ A++ K +
Sbjct: 268 DTSKDCKTIFVGNLPVNTDKKELHKLFRKFGSIETVRLRCVPRSDTKLPKRAAVILKDFH 327
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
D++ AY+ FK E+S + AL N ++ HIR+D + D P D K+++
Sbjct: 328 PERDNICAYVCFKEEESAQKALKMNGKLVKSFHIRVD--------MSNHD-PKTDFKRSI 378
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
FVGNLP D+K+E++ F CG + VRVIR VGKGI YV FK++
Sbjct: 379 FVGNLPLDIKEEDVRSHFESCG------KIRNVRVIRDSKSGVGKGICYVTFKSK 427
>gi|302846041|ref|XP_002954558.1| hypothetical protein VOLCADRAFT_118759 [Volvox carteri f.
nagariensis]
gi|300260230|gb|EFJ44451.1| hypothetical protein VOLCADRAFT_118759 [Volvox carteri f.
nagariensis]
Length = 1010
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 106/210 (50%), Gaps = 40/210 (19%)
Query: 223 KLLRTIFVGNLP--LKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQIN 279
+L RT+FVGNLP K + + F FG ++SVRIR VP+ +D +PR+ AIL +++
Sbjct: 722 RLSRTVFVGNLPSSFATTPKLVRRLFEGFGAVESVRIRGVPVKMDANMPRRAAILSGKVD 781
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP------------------- 320
A++VFK + +AAL NM ++ G+HIR+D A P
Sbjct: 782 FERGPCTAFVVFKQPEVAQAALGANMQLVEGHHIRVDLAAPRSAAAAAAAAAAAAVGSGK 841
Query: 321 --------------PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN----D 362
G +YD ++VFVGNL F V DEE+ +L G +
Sbjct: 842 VKAKAAAAAAAAAAAAAAAAGSSGGMYDPSRSVFVGNLHFQVTDEELIELVLGQAAMHPE 901
Query: 363 LESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
L +VEAVRV+R VGKG A+VL KT+
Sbjct: 902 LTDAVEAVRVVRDRENTVGKGFAFVLLKTK 931
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 128/228 (56%), Gaps = 23/228 (10%)
Query: 172 VEKDYVEKKYGVIAKEEEGKKVGVGEKRKKAD---NETEDMLVHRKEEGFDDEG--KLLR 226
EK +++ + +EEG+ KRK+AD +E E H+K F+ E K+ R
Sbjct: 90 AEKKLQDRESALQNADEEGQASAKKVKRKRADGGEDEEERPTKHKKTVKFNAEERLKMKR 149
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP KKK L+ F K G I+SVR RSV D + RK A +Q++++ +++
Sbjct: 150 TVFVGNLPSSCKKKDLLSVFKKSGVIESVRFRSVIREDPTMSRKVAAIQRKVHPKKQNIN 209
Query: 287 AYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AYIVFK E+S AL +N I G +IR+DR K +D K+++FVGNLP
Sbjct: 210 AYIVFKEEESATDALKWNGHEIQAGFYIRVDRVSQHSK---------HDHKRSIFVGNLP 260
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+D+ + + F CG ++EAVR++R +GKG YVLF++
Sbjct: 261 YDISELPLQNHFQECG------NIEAVRLVRDRDSGMGKGFGYVLFES 302
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 25/111 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R+IFVGNLP + + L F + G I++VR L + +
Sbjct: 252 RSIFVGNLPYDISELPLQNHFQECGNIEAVR-----------------LVRDRDSGMGKG 294
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--------PPRKKLKGE 328
Y++F+S S AL N + + IR+ R+ PP +K +G+
Sbjct: 295 FGYVLFESPDSVMLALKLNGSTLQQRKIRVKRSVKKEKEKKTPPGRKAEGQ 345
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 127/228 (55%), Gaps = 23/228 (10%)
Query: 172 VEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADN---ETEDMLVHRKEEGFDDEG--KLLR 226
EK +++ + +EEG+ KRK+AD E E H+K F+ E K+ R
Sbjct: 89 AEKKLQDRESALQNADEEGQASAKKVKRKRADGGEEEEERPTKHKKTVKFNAEERLKMKR 148
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP KKK L+ F K G I+SVR RSV D + RK A +Q++++ +++
Sbjct: 149 TVFVGNLPSSCKKKDLLSVFKKSGVIESVRFRSVIREDPTMSRKVAAIQRKVHPKKQNIN 208
Query: 287 AYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AYIVFK E+S AL +N I G +IR+DR K +D K+++FVGNLP
Sbjct: 209 AYIVFKEEESATDALKWNGHEIQAGFYIRVDRVSQHSK---------HDHKRSIFVGNLP 259
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+D+ + + F CG ++EAVR++R +GKG YVLF++
Sbjct: 260 YDISELPLQNHFQECG------NIEAVRLVRDRDSGMGKGFGYVLFES 301
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R+IFVGNLP + + L F + G I++VR L + +
Sbjct: 251 RSIFVGNLPYDISELPLQNHFQECGNIEAVR-----------------LVRDRDSGMGKG 293
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--------PPRKKLKG 327
Y++F+S S AL N + + IR+ R+ PP +K +G
Sbjct: 294 FGYVLFESPDSVMLALKLNGSTLQQRKIRVKRSVKKEKEKKTPPGRKAEG 343
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 213 RKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
+K+E D K RT+FVGNLP K+TL + F ++G I+SVR RS+ + +K A
Sbjct: 221 KKKEHPDTPDKNERTLFVGNLPGTATKRTLRQMFCQYGPIESVRFRSIVPAREGLSKKVA 280
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
L K ++ +V+AY+V++ ++ + ALA N V+ G HIR+D + G+ P
Sbjct: 281 FLTKSLHSTKQTVNAYVVYREREAVKKALALNGTVVLGKHIRVD--------VVGDTKPQ 332
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
TVFVGNLP +V+DEE++ F D V +VR+IR +GKG +V FK R
Sbjct: 333 ASESHTVFVGNLPHEVQDEELWTFFADCGD----VTSVRLIRDKGTGMGKGFGFVTFKNR 388
>gi|147898640|ref|NP_001085272.1| RNA binding motif protein 34 [Xenopus laevis]
gi|62185676|gb|AAH92323.1| LOC443584 protein [Xenopus laevis]
Length = 414
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 18/182 (9%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+R EE ++ RT+FVGNLP K+TL F +FG I+S+R RSV + + RK
Sbjct: 159 VNRAEERIKNK----RTVFVGNLPADCTKQTLTSLFKEFGPIESLRFRSVARAEANLSRK 214
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A +Q++++ ++++AY+VFK E S AL N A +G G HIR+D A
Sbjct: 215 VATIQRKVHPKRNNINAYVVFKDESSASKALMRNGAEVGSGFHIRVDMA---------SK 265
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ +D K++ FVGNLP+D+++E I + F D V+ VR+IR +GKG YVLF
Sbjct: 266 SSSHDNKRSAFVGNLPYDIEEESIRKHFSQCGD----VQGVRIIRDQKTGIGKGFGYVLF 321
Query: 390 KT 391
++
Sbjct: 322 ES 323
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 19/94 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIP-RKGAILQKQINENADS 284
R+ FVGNLP ++++++ K F + G++ VRI I D K KG
Sbjct: 273 RSAFVGNLPYDIEEESIRKHFSQCGDVQGVRI----IRDQKTGIGKG------------- 315
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
Y++F+S + + AL N + + G IR+ R+
Sbjct: 316 -FGYVLFESADAVQLALKLNNSQLSGRRIRVKRS 348
>gi|242022697|ref|XP_002431775.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212517100|gb|EEB19037.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 292
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 98/165 (59%), Gaps = 17/165 (10%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K + K F +FG++ S RIR +PI + +K A ++K+ N +SV
Sbjct: 31 TVFVGNLPITYDKTKVTKLFSRFGKVVSARIRCIPIASINMKKKVAAIKKEFNPRRNSVV 90
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+ F SE S +AA+ N ++ G+H+R++ A E + D K +FVG LPF
Sbjct: 91 AYVKFASEDSVKAAVDANGMIVDGHHLRINLA---------ETSTEIDTNKAIFVGGLPF 141
Query: 347 DVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
D++D+E+++ F CG + +VR+IR H +GKGI YV F
Sbjct: 142 DIEDDELWEFFENCG------KINSVRIIRDSHTSMGKGIGYVNF 180
>gi|49114983|gb|AAH72838.1| LOC443584 protein, partial [Xenopus laevis]
Length = 403
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 18/182 (9%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+R EE ++ RT+FVGNLP K+TL F +FG I+S+R RSV + + RK
Sbjct: 159 VNRAEERIKNK----RTVFVGNLPADCTKQTLTSLFKEFGPIESLRFRSVARAEANLSRK 214
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A +Q++++ ++++AY+VFK E S AL N A +G G HIR+D A
Sbjct: 215 VATIQRKVHPKRNNINAYVVFKDESSASKALMRNGAEVGSGFHIRVDMA---------SK 265
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ +D K++ FVGNLP+D+++E I + F D V+ VR+IR +GKG YVLF
Sbjct: 266 SSSHDNKRSAFVGNLPYDIEEESIRKHFSQCGD----VQGVRIIRDQKTGIGKGFGYVLF 321
Query: 390 KT 391
++
Sbjct: 322 ES 323
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 19/94 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIP-RKGAILQKQINENADS 284
R+ FVGNLP ++++++ K F + G++ VRI I D K KG
Sbjct: 273 RSAFVGNLPYDIEEESIRKHFSQCGDVQGVRI----IRDQKTGIGKG------------- 315
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
Y++F+S + + AL N + + G IR+ R+
Sbjct: 316 -FGYVLFESADAVQLALKLNNSQLSGRRIRVKRS 348
>gi|308798913|ref|XP_003074236.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116000408|emb|CAL50088.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 366
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 105/174 (60%), Gaps = 8/174 (4%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQINENA 282
L RT+FVGN+P K L + F G++ S R+R+VP+ D PRK +L+ ++N
Sbjct: 143 LARTVFVGNVPATTTTKALRRFFGAAGKVKSARLRNVPVEADGHEPRKVKVLKGKLNAER 202
Query: 283 DSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
+ A++VF K+E + +AA NM G H+R+D A P + E +YD ++VF+
Sbjct: 203 GNATAFVVFEKAESAQKAAETLNMKAFEGRHVRVDLAAKP-SIVSSE--VVYDHTRSVFL 259
Query: 342 GNLPFDVKDEEIYQLFCG---LNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
G+LPF+V DE++ +LF +L SVEAVRV+R +GKGI +VLFKT+
Sbjct: 260 GHLPFNVDDEDVIRLFNKNEEYPELRKSVEAVRVVRDRKTTMGKGIGFVLFKTK 313
>gi|326428919|gb|EGD74489.1| hypothetical protein PTSG_05853 [Salpingoeca sp. ATCC 50818]
Length = 481
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI-LQKQINENADS 284
RTIFVGNLP+ K K L K F +FG+I+S R R+ ++ K K A+ L++++ +S
Sbjct: 121 RTIFVGNLPINTKPKALKKLFSQFGKIESCRFRTTNLMAHKGGAKAAVLLRRKVGGEENS 180
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
V+AY+VF + AAL N V H+R+D + G + L KTVFVGNL
Sbjct: 181 VNAYVVFAEDAMARAALKCNGMVFNERHLRVD--------MAGSNTRLPPT-KTVFVGNL 231
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
PFDV +EE+Y F D +V VRVIR +RVGKG AYV F
Sbjct: 232 PFDVTEEELYAAF----DEAGTVAGVRVIRDKVLRVGKGFAYVSF 272
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 99/165 (60%), Gaps = 12/165 (7%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFVGNLP +K + F K+G I+S+R RS+ + +K A + K ++ N +V
Sbjct: 239 RTIFVGNLPGTATQKAVRHVFSKYGTIESIRFRSIVPAKESLSKKVAFISKALHSNKQTV 298
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+VFK++++ AL+ N V+ GNHIR+D P+ ++ K+TVFVGNL
Sbjct: 299 NAYVVFKAKEAVNKALSLNGGVLFGNHIRVDCVGAPKSQVSE--------KQTVFVGNLA 350
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+V+DEE+++LF D V AVR++R +GKG +V FK
Sbjct: 351 HEVQDEELWKLFAECGD----VVAVRLVRDKVTGMGKGFGFVTFK 391
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 101/168 (60%), Gaps = 16/168 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFVGNLP V KK L K F +FG+ID++R+R IP++ A + +++ SV
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNELHPKMKSV 401
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYI F+SE+ST+ AL+ N GN+IR+D + +K D Y+ KK+VF+GNL
Sbjct: 402 YAYIRFESEESTKKALSVNGRKFEGNYIRVDMS------MKSNDR--YETKKSVFIGNLH 453
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
F+V D+ + F CG +++VR+IR VGKG YV FK+
Sbjct: 454 FNVDDDSVRNHFKRCG------EIQSVRIIRDNQTGVGKGFGYVNFKS 495
>gi|390363636|ref|XP_781943.2| PREDICTED: uncharacterized protein LOC576551 [Strongylocentrotus
purpuratus]
Length = 394
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 13/166 (7%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
L RT+FVGNLP+ + KK L F +G I+S+R RS+ D + +K A +++++N
Sbjct: 150 LARTVFVGNLPVNITKKELKGLFKIYGAIESMRFRSMGAADPSMSKKVAAIKQELNPKKT 209
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
S +AYIVF+ EQ AALA N ++ +H+R+D A +K +D+K+++FVGN
Sbjct: 210 SFNAYIVFEEEQCARAALASNGKIVNKHHMRVDIAGNNKK---------HDMKRSLFVGN 260
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
L F++ DE + F +VE VR+IR VGKG YVLF
Sbjct: 261 LAFNIDDEAVRNHFEEF----GTVEGVRLIRDKATGVGKGFGYVLF 302
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 98/168 (58%), Gaps = 16/168 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFVGNLP V KK L K F +FG+ID++R+R IP++ A + ++ SV
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNDLHPKMKSV 401
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYI F+SE+ST+ AL+ N GN++R+D + K Y+ KK+VF+GNL
Sbjct: 402 YAYIRFESEESTKKALSINGTKFEGNYVRVDMSTKSNDK--------YETKKSVFIGNLH 453
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
F+V D+ + F CG +++VR+IR VGKG YV FK+
Sbjct: 454 FNVDDDSVRNHFKRCG------EIQSVRIIRDNQTGVGKGFGYVNFKS 495
>gi|299470988|emb|CBN78849.2| white-brown-complex ABC transporter family (Partial) [Ectocarpus
siliculosus]
Length = 777
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 110/205 (53%), Gaps = 26/205 (12%)
Query: 199 RKKADNETEDMLVHR--KEEGF----DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
R KA+ E D KEEG DDE K RT+FVGNLP K + F ++G +
Sbjct: 297 RGKAEAEAGDTAKASAPKEEGGNNNKDDEEKESRTVFVGNLPTSFTPKKVKAAFKEYGAV 356
Query: 253 DSVRIRSVPII--------DTKIPRKGAILQKQINENA-DSVHAYIVFKSEQSTEAALAF 303
+SVR+RSV + D ++ RK + + ++E SV+AY+V+K S E ALA
Sbjct: 357 ESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDCASVEKALAA 416
Query: 304 NMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG-LND 362
N +GG H+R+DRA GE YD ++VF+GNLP D +EE+ +LF L
Sbjct: 417 NGTDVGGKHVRVDRA------KSGE----YDHTRSVFLGNLPMDAGEEEVRELFASKLEG 466
Query: 363 LESSVEAVRVIRHPHMRVGKGIAYV 387
SVE VR++R VGKG YV
Sbjct: 467 GPKSVEGVRLVRDKATLVGKGFGYV 491
>gi|430813955|emb|CCJ28747.1| unnamed protein product [Pneumocystis jirovecii]
Length = 364
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 109/181 (60%), Gaps = 23/181 (12%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIK----EFIKFGEIDSVRIRSVPIIDTKIPRKGAI 273
DD K L TIFVGNLP+ V K++ K +F++FG+I S+R RS+ T +P+K A
Sbjct: 108 DDFEKALCTIFVGNLPISVVSSKSVYKNFKTKFLEFGKIKSIRFRSIAF-STFLPKKIAY 166
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
+QK+ + D ++AYIV+++++S++ ALA N V H+R+D P AP +
Sbjct: 167 IQKKFHTKRDLLNAYIVYETQESSKNALALNGVVFLDRHLRVDSVAYP--------AP-H 217
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
K+++F+GNL FD ++E+++ F CG +E VR++R +GKG AYV FK
Sbjct: 218 VPKRSIFIGNLSFDAQEEQLWSYFAHCG------EIEFVRIVRDNKTNLGKGFAYVQFKD 271
Query: 392 R 392
R
Sbjct: 272 R 272
>gi|406608094|emb|CCH40528.1| Nucleolar protein 12 [Wickerhamomyces ciferrii]
Length = 458
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 23/175 (13%)
Query: 223 KLLRTIFVGNLPLKVKK-----KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ 277
K RTIF+GNL V K K L K F +FG I+S+R RS+ + IPRK A +Q++
Sbjct: 168 KAQRTIFIGNLSAIVIKNKKDYKELKKYFTQFGLIESIRFRSISF-NEPIPRKAAFVQQK 226
Query: 278 INENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK 337
++E+ DS++AYIVFK + + +L N V+ H+R+D P K D K+
Sbjct: 227 LHESRDSINAYIVFKEKDAARKSLEANGKVLFDLHLRVDSVSHPSK---------IDNKR 277
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
T+FVGNL F+ K+EE++ +F CG +E+VR++R +GKG YV FK
Sbjct: 278 TIFVGNLDFEEKEEELWNIFSECG------EIESVRIVRDSTTNMGKGFGYVQFK 326
>gi|432843238|ref|XP_004065582.1| PREDICTED: RNA-binding protein 34-like [Oryzias latipes]
Length = 421
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 18/172 (10%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
K RT+FVGNLP+ KKT++ F G I+S+R RS+ D + RK A +++Q++
Sbjct: 158 KTKRTVFVGNLPVTCTKKTVLNLFKDKGSIESIRFRSLVREDPAMSRKLAAIRRQVHPQR 217
Query: 283 DSVHAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
S++AY+VFK E AL N M V +IR+DRA D +D K++VFV
Sbjct: 218 KSMNAYVVFKEEAGAIRALESNGMEVETNYNIRVDRAT---------DGSSHDHKRSVFV 268
Query: 342 GNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
GNLPFD+ ++ + F CG +VEAVR++R +GKG YVLF++
Sbjct: 269 GNLPFDIHEQAFRKHFETCG------TVEAVRLVRDKDSGLGKGFGYVLFES 314
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R++FVGNLP + ++ K F G +++VR+ + K + L K
Sbjct: 264 RSVFVGNLPFDIHEQAFRKHFETCGTVEAVRL---------VRDKDSGLGKGF------- 307
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKK 324
Y++F+S S + AL N + + G IR+ R+ K+
Sbjct: 308 -GYVLFESADSVQLALELNASKLEGRSIRVKRSVKKEKQ 345
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 101/171 (59%), Gaps = 16/171 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKE----FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
RTIFVGNLP+ V +K +++ F +FG I+ +R RS+ ++K+PRK A KQ ++
Sbjct: 173 RTIFVGNLPICVTEKAALQQLKTLFSQFGTIECIRFRSIAF-NSKLPRKLAYSAKQFHDK 231
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
DS++AYIV++ +S AL + + H+R+DR+ ++K YD KK++F+
Sbjct: 232 RDSLNAYIVYELPESVSKALELHGTLFLEKHLRVDRSETTQQK-------KYDHKKSIFI 284
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
GNL FD+ +E ++ F D+ + VRVIR + VGKG YV F R
Sbjct: 285 GNLLFDISEEALWSFFSDCGDITN----VRVIRDRNTNVGKGFGYVQFAER 331
>gi|118398866|ref|XP_001031760.1| RNA binding protein [Tetrahymena thermophila]
gi|89286093|gb|EAR84097.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 451
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 20/187 (10%)
Query: 207 EDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK 266
E+M +K+E D RT+FVGN+ L+ + KEF ++G+I+ + IRSVP+ ++K
Sbjct: 69 ENMTAKQKKEKDD------RTVFVGNISLEATGSQIAKEFKQYGKIEKIWIRSVPVENSK 122
Query: 267 IPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK 326
+P++ +++ K+ + AD +AYI+F +++ E +L N V H+R+D+A
Sbjct: 123 MPKRASVILKKFKDGADRKNAYILFSTQEEAEKSLEANGKVFLEKHLRVDKA-------- 174
Query: 327 GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
+ + D +T+FVGNL F + +E++ F D+ + VRVIR P GKG Y
Sbjct: 175 --NEKILDYTRTIFVGNLHFKISEEQLRHHFESCGDILN----VRVIRDPKTHEGKGFGY 228
Query: 387 VLFKTRV 393
V FK +
Sbjct: 229 VFFKEKT 235
>gi|255724660|ref|XP_002547259.1| nucleolar protein 12 [Candida tropicalis MYA-3404]
gi|240135150|gb|EER34704.1| nucleolar protein 12 [Candida tropicalis MYA-3404]
Length = 476
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 131/240 (54%), Gaps = 25/240 (10%)
Query: 162 KKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEG---- 217
K KK +D+E Y +K + +++ +K G E + D +TED R +
Sbjct: 105 KSKKKDDNEDLESKYFDK--LMTENKQQDEKEGEEESKDSGDEKTEDEKSKRAKAAKTID 162
Query: 218 FDDEG--KLLRTIFVGNLPL-----KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
F + K RT+FVGN+P K +++ K F +G+I+S+R RS+ D +PRK
Sbjct: 163 FKEAELEKADRTVFVGNVPSEIINSKAIERSFKKLFKHYGKIESIRYRSISF-DENLPRK 221
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA 330
A +K ++++ DSV+AYIV+K + ++ AA N V +H+R+D P A
Sbjct: 222 VAFAKKNLHKSRDSVNAYIVYKEKPASLAAKELNATVFEDHHLRVDHVAHP--------A 273
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P D KKT+FVGNL F+ K+E +++ F L++ VE+VR+IR +GKG A V FK
Sbjct: 274 P-KDNKKTIFVGNLDFEEKEESLWKYFNS--KLDNDVESVRIIRDSKTNLGKGFALVQFK 330
>gi|241951268|ref|XP_002418356.1| nucleolar protein, putative [Candida dubliniensis CD36]
gi|223641695|emb|CAX43656.1| nucleolar protein, putative [Candida dubliniensis CD36]
Length = 451
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 100/170 (58%), Gaps = 17/170 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKE-----FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V +I + F +G+IDS+R RS+ D +PRK A +K +++
Sbjct: 156 RTVFVGNVPADVITSKIIAKNFKNLFKHYGKIDSIRYRSISF-DENLPRKVAFAKKNLHK 214
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AYIV+K + ++ AA N AV +H+R+D P AP D K+T+F
Sbjct: 215 SRDSVNAYIVYKEKPASIAAKELNAAVFEDHHLRVDHVSHP--------AP-KDNKRTIF 265
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VGNL F+ K+E +++ F + VE+VR+IR +GKG A V FK
Sbjct: 266 VGNLDFEEKEETLWKYFNS--KFDEDVESVRIIRDSKTNLGKGFALVQFK 313
>gi|68469607|ref|XP_721055.1| hypothetical protein CaO19.8429 [Candida albicans SC5314]
gi|68469846|ref|XP_720933.1| hypothetical protein CaO19.809 [Candida albicans SC5314]
gi|74680276|sp|Q5AHI7.1|NOP12_CANAL RecName: Full=Nucleolar protein 12
gi|46442827|gb|EAL02113.1| hypothetical protein CaO19.809 [Candida albicans SC5314]
gi|46442956|gb|EAL02241.1| hypothetical protein CaO19.8429 [Candida albicans SC5314]
Length = 454
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 100/170 (58%), Gaps = 17/170 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKE-----FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V +I + F +G+IDS+R RS+ D +PRK A +K +++
Sbjct: 159 RTVFVGNVPADVITSKIIAKNFKNLFKHYGKIDSIRYRSISF-DEHLPRKVAFAKKNLHK 217
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AYIV+K + ++ AA N V +H+R+D P AP D K+T+F
Sbjct: 218 SRDSVNAYIVYKEKPASIAAKELNATVFEDHHLRVDHVSHP--------AP-KDNKRTIF 268
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VGNL F+ K+E +++ F L+ VE+VR+IR +GKG A V FK
Sbjct: 269 VGNLDFEEKEETLWKYFNS--KLDQDVESVRIIRDSKTNLGKGFALVQFK 316
>gi|238882194|gb|EEQ45832.1| nucleolar protein 12 [Candida albicans WO-1]
Length = 455
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 23/201 (11%)
Query: 195 VGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKE-----FIKF 249
V E+R KA T L ++ E D RT+FVGN+P V +I + F +
Sbjct: 135 VAEERTKAKVATTVDLKEKELEKAD------RTVFVGNVPADVITSKIIAKNFKNLFKHY 188
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+IDS+R RS+ D +PRK A +K ++++ DSV+AYIV+K + ++ AA N V
Sbjct: 189 GKIDSIRYRSISF-DEHLPRKVAFAKKNLHKSRDSVNAYIVYKEKPASIAAKELNATVFE 247
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
+H+R+D P AP D K+T+FVGNL F+ K+E +++ F L+ VE+
Sbjct: 248 DHHLRVDHVSHP--------AP-KDNKRTIFVGNLDFEEKEETLWKYFNS--KLDQDVES 296
Query: 370 VRVIRHPHMRVGKGIAYVLFK 390
VR+IR +GKG A V FK
Sbjct: 297 VRIIRDSKTNLGKGFALVQFK 317
>gi|354546721|emb|CCE43453.1| hypothetical protein CPAR2_210970 [Candida parapsilosis]
Length = 473
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 17/169 (10%)
Query: 226 RTIFVGNLPLKV-KKKTLIKEFIK----FGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT FVGN+P V KT+ K F K FG+IDS+R RS+ D +PRK + +K ++
Sbjct: 172 RTAFVGNVPSDVITSKTVAKNFKKLFKQFGKIDSIRFRSISF-DENLPRKVSFAKKSLHN 230
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AY+VF + S+ AA N V +H+R+D P AP D K+T+F
Sbjct: 231 SRDSVNAYVVFVEKSSSLAAKKLNAIVFENHHLRVDHVAHP--------AP-KDNKRTIF 281
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
VGNL F+ K+E ++ F N L++ VE+VR+IR +GKG A V F
Sbjct: 282 VGNLDFEEKEESLWNYFN--NKLDNDVESVRIIRDSKTNMGKGFALVQF 328
>gi|52345686|ref|NP_001004890.1| RNA binding motif protein 34 [Xenopus (Silurana) tropicalis]
gi|49523226|gb|AAH75294.1| MGC88935 protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 22/184 (11%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+R EE ++ RT+FVGNLP K+ L F +FG I+S+R RSV + + RK
Sbjct: 157 VNRAEERIKNK----RTVFVGNLPADYTKQMLKSLFKEFGHIESMRFRSVARAEANLSRK 212
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A +Q++++ +++AYIVFK E S AL N A +G G HIR+D A
Sbjct: 213 VAAIQRKVHPKRKNINAYIVFKDESSASQALKRNGAEVGSGFHIRVDIASKRSS------ 266
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
+D K++ F+GNLP+++++E + F CG V+ VR+IR +GKG YV
Sbjct: 267 ---HDNKRSAFIGNLPYEIEEEAVRDHFSECG------KVQGVRIIRDQKTGIGKGFGYV 317
Query: 388 LFKT 391
LF++
Sbjct: 318 LFES 321
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 19/94 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIP-RKGAILQKQINENADS 284
R+ F+GNLP +++++ + F + G++ VRI I D K KG
Sbjct: 271 RSAFIGNLPYEIEEEAVRDHFSECGKVQGVRI----IRDQKTGIGKG------------- 313
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
Y++F+S + + AL N + + G IR+ R+
Sbjct: 314 -FGYVLFESADAVQLALKLNNSELSGRKIRVKRS 346
>gi|448512989|ref|XP_003866856.1| Nop12 protein [Candida orthopsilosis Co 90-125]
gi|380351194|emb|CCG21417.1| Nop12 protein [Candida orthopsilosis Co 90-125]
Length = 466
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 19/170 (11%)
Query: 226 RTIFVGNLPLKV-KKKTLIKEFIK----FGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V KT K F K FG+IDS+R RS+ ++ +PRK + +K ++E
Sbjct: 166 RTVFVGNVPSDVITSKTTAKNFKKLFKEFGKIDSIRFRSISFGES-LPRKVSFAKKSLHE 224
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AYIVF + ++ A N V +H+R+D P AP D K+T+F
Sbjct: 225 SRDSVNAYIVFAEKSASLTAKKLNATVFENHHLRVDHVAHP--------AP-KDNKRTIF 275
Query: 341 VGNLPFDVKDEEIYQLFCGLND-LESSVEAVRVIRHPHMRVGKGIAYVLF 389
VGNL F+ K+E ++ F ND L++ VE+VR+IR +GKG A V F
Sbjct: 276 VGNLDFEEKEESLWTYF---NDKLDNDVESVRIIRDSKTNMGKGFALVQF 322
>gi|89266850|emb|CAJ83915.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 406
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 22/184 (11%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+R EE ++ RT+FVGNLP K+ L F +FG I+S+R RSV + + RK
Sbjct: 157 VNRAEERIKNK----RTVFVGNLPADYTKQMLKSLFKEFGHIESMRFRSVARAEANLSRK 212
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A +Q++++ +++AYIVFK E S AL N A +G G HIR+D A
Sbjct: 213 VAAIQRKVHPKRKNINAYIVFKDESSASQALKRNGAEVGSGFHIRVDIASKRSS------ 266
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
+D K++ F+GNLP+++++E + F CG V+ VR+IR +GKG YV
Sbjct: 267 ---HDNKRSAFIGNLPYEIEEEAVRDHFSECG------KVQGVRIIRDQKTGIGKGFGYV 317
Query: 388 LFKT 391
LF++
Sbjct: 318 LFES 321
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 19/94 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIP-RKGAILQKQINENADS 284
R+ F+GNLP +++++ + F + G++ VRI I D K KG
Sbjct: 271 RSAFIGNLPYEIEEEAVRDHFSECGKVQGVRI----IRDQKTGIGKG------------- 313
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
Y++F+S + + AL N + + G IR+ R+
Sbjct: 314 -FGYVLFESADAVQLALKLNNSELSGRKIRVKRS 346
>gi|291220976|ref|XP_002730499.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 458
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 102/167 (61%), Gaps = 17/167 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+F+GNLP+ + KK L K F K+G+I+SVR+RS +P+K ++++ + + ++
Sbjct: 181 RTVFIGNLPVDISKKELTKLFKKYGDIESVRLRSAAPSTLALPKKVVMIKEDFHPDRKNL 240
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+V+K E S +L N V+ G+HIR+D + +A +D +++VF+GNLP
Sbjct: 241 NAYVVYKEEISALKSLKKNGKVVRGHHIRVDVSS---------NASKHDHQRSVFIGNLP 291
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ + +E + Q F CG +V +VR++R +GKG YVLFK
Sbjct: 292 YKIDEEIVRQHFMQCG------NVISVRLVRDGKTGIGKGFGYVLFK 332
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R++F+GNLP K+ ++ + + F++ G + SVR+ + D K
Sbjct: 283 RSVFIGNLPYKIDEEIVRQHFMQCGNVISVRL----VRDGKT-------------GIGKG 325
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
Y++FK S E AL FN + G +R+ R+
Sbjct: 326 FGYVLFKDISSVEFALKFNDKPLFGRKVRIKRS 358
>gi|149248228|ref|XP_001528501.1| hypothetical protein LELG_01021 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448455|gb|EDK42843.1| hypothetical protein LELG_01021 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 452
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 111/178 (62%), Gaps = 18/178 (10%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKF----GEIDSVRIRSVPIIDTKIPRKGAI 273
+D+G+ RT+FVGN+P +V K++ K F + G+IDS+R RS+ D ++P+K +
Sbjct: 166 EDDGRNDRTVFVGNVPNQVITSKSVAKSFKRLFKEHGKIDSIRFRSIAFSD-QLPKKVSY 224
Query: 274 LQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
++K ++E+ DSV+AY+VF + + S +AA A N V +H+R+D GE AP
Sbjct: 225 VKKNLHESRDSVNAYVVFVEPKDSLKAAKALNATVFEDHHLRVDHV--------GEPAP- 275
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
D K+T+FVGNL F+ K+E +++ F L+ VE+VR++R +GKG A V FK
Sbjct: 276 KDNKRTIFVGNLDFEEKEENLWKFFN--EKLDGDVESVRIVRDSVTNMGKGFALVQFK 331
>gi|326915530|ref|XP_003204069.1| PREDICTED: RNA-binding protein 34-like [Meleagris gallopavo]
Length = 475
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 26/208 (12%)
Query: 183 VIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTL 242
+AK + G K++K NE E+M+ ++ RT+FVGNLP+ + L
Sbjct: 123 AVAKSDVNSGTGRTVKQEKKKNEAEEMIKNK------------RTVFVGNLPVNYTAQML 170
Query: 243 IKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA 302
F ++G+I+S+R RSV + + RK A ++++I+ N ++AY+VFK E + AL
Sbjct: 171 KSLFKEYGQIESIRFRSVVPAEVALSRKLATIKRKIHPNVKYINAYVVFKEEHAAVKALK 230
Query: 303 FN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN 361
N V G HIR+D A L+D K++VF+GNL +D+ D + + F
Sbjct: 231 KNGTEVASGFHIRVDSA---------SKNSLHDNKRSVFLGNLAYDISDSAVREHFADCG 281
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLF 389
D V AVR++R +GKG YVLF
Sbjct: 282 D----VVAVRIVRDRQSGMGKGFGYVLF 305
>gi|443722303|gb|ELU11225.1| hypothetical protein CAPTEDRAFT_227550 [Capitella teleta]
Length = 565
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 15/167 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+F+GN+ LK +KK ++K F G I S+R RSV + K+P++ A++ K +E+ S
Sbjct: 306 RTVFIGNISLKAEKKDILKLFKGCGSIASIRFRSVTPSNPKLPKRAALITKDFHESMASF 365
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYIVFK ++S AL N H+R+D P KK +D K++VF+GNLP
Sbjct: 366 NAYIVFKEQESATKALKLNGEKFLNFHLRVDSLHPGVKK-------CHDDKRSVFLGNLP 418
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+V+++E+ F CG VE VR++R +GKG +VLFK
Sbjct: 419 LEVQEDEVRLHFQECG------EVENVRLVRDRGTGIGKGFGFVLFK 459
>gi|213402043|ref|XP_002171794.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|211999841|gb|EEB05501.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 437
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 23/173 (13%)
Query: 226 RTIFVGNLPLKV---KK--KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FV NLP K+ KK K+L K F ++G++ SVR RS+ + IPRK A ++K+ ++
Sbjct: 178 RTVFVNNLPAKIVTDKKLTKSLKKHFSQYGKVQSVRFRSIAFSEV-IPRKAAFIEKKFHD 236
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
DSV+AY+VF++ ++ A+ N + H+R+D P AP + K+ VF
Sbjct: 237 ERDSVNAYVVFETSKAAREAVKLNGTMFLNRHLRVDHISHP--------APQVN-KRCVF 287
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
VGNL F+ ++E ++ F CG VE VR+IR P +GKG AYV F++
Sbjct: 288 VGNLAFEAEEEPLWCYFEPCG------PVEYVRIIRDPKTNLGKGFAYVQFQS 334
>gi|253683404|ref|NP_001156572.1| RNA binding motif protein 34 [Acyrthosiphon pisum]
gi|239792368|dbj|BAH72536.1| ACYPI010185 [Acyrthosiphon pisum]
Length = 418
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGN+P+ VK + K F +FGE+++ R+RSV + + ++P++ +I++ + D+
Sbjct: 178 RTVFVGNVPVSVKMSAVKKLFKQFGEVETTRLRSVAVKNLEVPKRVSIMKGDFHPQRDTA 237
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ Y+ FK+ + + AL N G+ IR+D A K ++KK +F+GNLP
Sbjct: 238 NVYVRFKTIEEAQKALVLNATQFEGHTIRVDMALNSNHK--------QNMKKGIFIGNLP 289
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+ ++++EI+ F CG ++ AVR++R V KG YV F+T+
Sbjct: 290 YSIQEDEIWDYFKDCG------TISAVRIVRDNATGVSKGFGYVDFETK 332
>gi|324507077|gb|ADY43007.1| RNA-binding protein 34 [Ascaris suum]
Length = 376
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 19/197 (9%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G +RK A ET+ + +KE+ +E + RTIFVGN P +K++ K F K+G I+SV
Sbjct: 99 GTQRKHASRETQRLNRVKKEKMTAEEKE--RTIFVGNAPTSATRKSIKKLFSKYGTIESV 156
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL 315
R+RSV + K+ +K A+L+ ++ S+H Y+ F + S +AAL N + + +R+
Sbjct: 157 RLRSVVSDNAKLSKKIAVLKNDLSPKMHSLHFYVKFINADSVKAALDMNGEKLDDHRLRV 216
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVI 373
D +C ++ YD +KTVF+GN+PF +++++ F CG V+ VR++
Sbjct: 217 D-SCASKRN--------YDSQKTVFIGNVPFGTQEDDLCAHFEKCG------DVDFVRIV 261
Query: 374 RHPHMRVGKGIAYVLFK 390
R +GKGIA+V FK
Sbjct: 262 RDRATGIGKGIAFVAFK 278
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 17/104 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+F+GN+P ++ L F K G++D VRI + + + K I
Sbjct: 229 KTVFIGNVPFGTQEDDLCAHFEKCGDVDFVRI---------VRDRATGIGKGI------- 272
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED 329
A++ FK AL + + GG +R+ R K+L G++
Sbjct: 273 -AFVAFKETAVIPIALKMDGSDFGGRQLRVTRIQKKNKRLLGKE 315
>gi|348538194|ref|XP_003456577.1| PREDICTED: RNA-binding protein 34-like [Oreochromis niloticus]
Length = 425
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 21/195 (10%)
Query: 203 DNETEDMLVHR---KEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS 259
+N+TE ++ R K + K RT+FVGNLP+ KKTL F G I+S+R RS
Sbjct: 134 ENDTEYWVMKRQRLKASKAQETLKKKRTVFVGNLPISCTKKTLRSLFRDKGSIESIRFRS 193
Query: 260 VPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRA 318
V D + RK A ++++++ S++AY+VFK E AL N M + HIR+DR
Sbjct: 194 VVREDPSMSRKVAAIKRKVHPKKQSINAYVVFKDEDGVTKALERNGMEMEKDFHIRVDRV 253
Query: 319 CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHP 376
D+ +D K++VFVGNL FD+ + + F CG +VEAVR++R
Sbjct: 254 T---------DSSSHDHKRSVFVGNLSFDINELTFRRHFEECG------TVEAVRLVRDK 298
Query: 377 HMRVGKGIAYVLFKT 391
+ +GKG YVLF++
Sbjct: 299 NSGLGKGFGYVLFES 313
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 17/93 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R++FVGNL + + T + F + G +++VR L + N
Sbjct: 263 RSVFVGNLSFDINELTFRRHFEECGTVEAVR-----------------LVRDKNSGLGKG 305
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
Y++F+S S + AL + + + G IR+ R+
Sbjct: 306 FGYVLFESTDSVQLALKLDGSKLEGRSIRVKRS 338
>gi|363731894|ref|XP_423974.3| PREDICTED: RNA-binding protein 34 [Gallus gallus]
Length = 405
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 28/215 (13%)
Query: 178 EKKYGVIAKEEEGKKVGVGE--KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPL 235
+KK A + G G G K++K NE E+M+ ++ RT+FVGNLP+
Sbjct: 124 QKKRASHAVTKSGGNSGAGRAVKQEKKKNEAEEMIKNK------------RTVFVGNLPV 171
Query: 236 KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQ 295
+ L F ++G+I+S+R RSV + + RK A ++++I+ N ++AY+VFK E+
Sbjct: 172 DCTAQMLKSLFKEYGQIESIRFRSVVPAEDTLSRKLAAIKRKIHPNVKYINAYVVFKEER 231
Query: 296 STEAALAFN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIY 354
AL N V G HIR+D A L+D K++VF+GNL +D+ D +
Sbjct: 232 DAVKALKKNGTEVASGFHIRVDSA---------SKNSLHDNKRSVFLGNLAYDISDSAVR 282
Query: 355 QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ F D V AVR++R +GKG YVLF
Sbjct: 283 EHFADCGD----VVAVRIVRDRQSGMGKGFGYVLF 313
>gi|345566286|gb|EGX49229.1| hypothetical protein AOL_s00078g262 [Arthrobotrys oligospora ATCC
24927]
Length = 574
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 29/193 (15%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIKFGEIDSVRIR 258
+ETE L +R+ E K T+FVGNLP K + KTL F G + S+R R
Sbjct: 269 HETEGDLQNRELE------KANCTVFVGNLPSSIISDKAQYKTLQSAFKVHGVVSSIRFR 322
Query: 259 SVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
S+ D +IPRK A + K ++ + ++V+AYIVFK+ ++ ++L N ++ +HIR+D
Sbjct: 323 SIAFSD-QIPRKAAFITKALHVDQNNVNAYIVFKTPEAARSSLQLNGTIVLNHHIRVDSV 381
Query: 319 CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHP 376
P K D +K VFVGNL F+ +E +++ F CG VE VR++R
Sbjct: 382 AHPAKN---------DSRKCVFVGNLDFEAAEESLWKHFSTCG------KVENVRLVRDA 426
Query: 377 HMRVGKGIAYVLF 389
VGKG AYV F
Sbjct: 427 KTNVGKGFAYVQF 439
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 100/166 (60%), Gaps = 17/166 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTI+VGN+P ++ KT+ K F FGEIDS+R+R V D+++ K A + K+++ +V
Sbjct: 332 RTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSRMSAKVATITKKMHPKVSTV 391
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ Y+ FK EQS + AL N +G N +R+D + K +D +D K+ VF+GN+P
Sbjct: 392 YVYVAFKEEQSAKDALKLNGHKLGENTLRVDLST------KNKD---HDQKRAVFLGNIP 442
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
FD+ ++E+ + F CG +E+VR+++ + +GI YV F
Sbjct: 443 FDITEDEVRKHFDSCG------KIESVRIVKDRKSGLSRGIGYVNF 482
>gi|412993493|emb|CCO14004.1| predicted protein [Bathycoccus prasinos]
Length = 447
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 111/215 (51%), Gaps = 47/215 (21%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKF-------------------GEIDSVRIRSVPII- 263
L RT+FVGN+P K K K L+ F + E+ S RIRSVP+
Sbjct: 90 LKRTMFVGNVPTKTKAKELVSFFKEMLLSSSSSSSKSEKKTKKTKAEVVSARIRSVPLKK 149
Query: 264 -----DTKIPRKGAIL-----QKQINENADSVH--------AYIVFKSEQSTEAALA-FN 304
D K+P + IL +K+ EN+ S++ AY+V+K E+ E A+ N
Sbjct: 150 SADEKDAKVPVRAKILGSLGKRKKDTENSGSINEASKSGCTAYVVWKREKDCERAVKKGN 209
Query: 305 MAVIGGNHIRLDRACPPRKKLKGEDAP-----LYDIKKTVFVGNLPFDVKDEEIYQLFCG 359
M G+ +R+D A + KG YD K+VF+GNLPFDV DEE+ ++F
Sbjct: 210 MQKFNGHTLRVDFAAKSSQTTKGGKGDDGSGVTYDRTKSVFIGNLPFDVSDEEVIEIFTK 269
Query: 360 ---LNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+L++ +EAVRV+R R GKGIA+VLFK+
Sbjct: 270 NKEYKELKTELEAVRVVRDKATRTGKGIAFVLFKS 304
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 115/203 (56%), Gaps = 23/203 (11%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 1219 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 1278
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 1279 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAAMQALKRNGAHIA 1338
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+DRA + K++VFVGNLP+ V++ I + F CG S
Sbjct: 1339 DGFRIRVDRASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 1382
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
+ AVR++R +GKG YVLF
Sbjct: 1383 IMAVRIVRDKMTGIGKGFGYVLF 1405
>gi|19115130|ref|NP_594218.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe
972h-]
gi|17367899|sp|O13741.1|NOP12_SCHPO RecName: Full=Nucleolar protein 12
gi|2462671|emb|CAB11047.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe]
Length = 438
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 23/172 (13%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
+T+FV NLP +V K L K F +FG +DS+R RS+ + IPRK A +K+ +
Sbjct: 164 KTVFVNNLPARVVTNKGDYKDLTKHFRQFGAVDSIRFRSLAFSEA-IPRKVAFFEKKFHS 222
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
D+V+AYIVF+ S +AL+ N + H+R+D P + D K+ VF
Sbjct: 223 ERDTVNAYIVFRDSSSARSALSLNGTMFMDRHLRVDSVSHPMPQ---------DTKRCVF 273
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VGNL F+ ++E +++ F CG S++ VR++R P +GKG AY+ FK
Sbjct: 274 VGNLAFEAEEEPLWRYFGDCG------SIDYVRIVRDPKTNLGKGFAYIQFK 319
>gi|241622203|ref|XP_002408913.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215503069|gb|EEC12563.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 266
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 105/195 (53%), Gaps = 36/195 (18%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEG--KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
R+ A ++ D + ++ F E K RTIFVGNLP+ +K L + F ++G I+SVR
Sbjct: 37 REVAPDDVADAEAPKPQKNFPPESPDKEARTIFVGNLPVTASEKPLRRFFNQYGAIESVR 96
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD 316
RS ++ + +V+AY+VFK ++S + AL N +++ GNHIR+D
Sbjct: 97 FRS-----------------SLHSSKQNVNAYVVFKQKESVDKALVANGSLLLGNHIRVD 139
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIR 374
R KK P D +K+VFVGNLP +V+DEE++ F CG V VRVIR
Sbjct: 140 RVG---KK------PQVDDRKSVFVGNLPHEVQDEELWNCFSECG------QVTGVRVIR 184
Query: 375 HPHMRVGKGIAYVLF 389
+GKG +V F
Sbjct: 185 DRETGMGKGFGFVTF 199
>gi|42794007|ref|NP_766350.2| RNA-binding protein 34 [Mus musculus]
gi|148679875|gb|EDL11822.1| RNA binding motif protein 34, isoform CRA_a [Mus musculus]
gi|187954471|gb|AAI41279.1| RNA binding motif protein 34 [Mus musculus]
Length = 442
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 19/167 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+++SVR RSV + + +K A ++++ + + S+
Sbjct: 189 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 248
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D L E A K++VFVGNL
Sbjct: 249 NAYVVFKDESAAAKALQRNGAQIAEGFRIRVD--------LASETAS--RDKRSVFVGNL 298
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P+ ++D + + F CG S+ AVR++R+P VG+G YVLF
Sbjct: 299 PYKIEDSALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLF 339
>gi|354468817|ref|XP_003496847.1| PREDICTED: RNA-binding protein 34-like [Cricetulus griseus]
Length = 425
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 19/167 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+I+SVR RSV + + +K A ++++ + + S+
Sbjct: 183 RTVFVGNLPVTCNKKKLKSLFKEYGQIESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 242
Query: 286 HAYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D A + K++VFVGNL
Sbjct: 243 NAYVVFKDESAATKALQRNGAQIEEGFRIRVDLASETTSR----------DKRSVFVGNL 292
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P+ V++ + + F CG S+ AVR++R+P VG+G YVLF
Sbjct: 293 PYKVEEAALEEHFLDCG------SIVAVRILRNPQTGVGRGFGYVLF 333
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 22/197 (11%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
RK D+ + ++ RK+ + E + L RT+FVGNLP+ KK L F ++G+I+SV
Sbjct: 155 RKILDDIDDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTFNKKKLKSFFKEYGQIESV 214
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I G IR
Sbjct: 215 RFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIR 274
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D AC + K++VFVGNLP+ V++ + + F CG S+ AVR+
Sbjct: 275 VDLACETSSR----------DKRSVFVGNLPYKVEESAVEKHFLDCG------SILAVRI 318
Query: 373 IRHPHMRVGKGIAYVLF 389
+R +GKG YVLF
Sbjct: 319 VRDKMTGIGKGFGYVLF 335
>gi|190347472|gb|EDK39744.2| hypothetical protein PGUG_03842 [Meyerozyma guilliermondii ATCC
6260]
Length = 442
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 118/231 (51%), Gaps = 22/231 (9%)
Query: 167 RKRDDVEKDYVEKKY-GVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLL 225
R R E D +E KY + K+ K + R + V KE+ FD K
Sbjct: 108 RPRKSEEDDDIEGKYFQALNKDTHPKNTDEKKDRTRTPKVATATKVDLKEDEFD---KAE 164
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V +K K F + G ++SVR RS+ + +PRK A QK+++
Sbjct: 165 RTVFVGNVPATVVTSKSTQKQFKKLFSEVGPVESVRFRSIAFGEA-LPRKAAFAQKKLHG 223
Query: 281 NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
DSV+AY+V+K + + A++ N +H+R+D P K D K+T+
Sbjct: 224 ARDSVNAYVVYKEKTPSRNAVSRLNAREFDHHHLRVDHVAHPVAK---------DNKRTI 274
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
FVGNL F+ +EE+++ F D + VE+VRV+R +GKG A V FK
Sbjct: 275 FVGNLDFEASEEELWRYFNSHTD--NDVESVRVVRDSKTNLGKGFALVQFK 323
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 114/203 (56%), Gaps = 23/203 (11%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 144 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 203
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 204 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 263
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ I + F CG S
Sbjct: 264 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 307
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
+ AVR++R +GKG YVLF
Sbjct: 308 IMAVRIVRDKMTGIGKGFGYVLF 330
>gi|76363311|sp|Q8C5L7.1|RBM34_MOUSE RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|26346951|dbj|BAC37124.1| unnamed protein product [Mus musculus]
Length = 375
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 19/167 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+++SVR RSV + + +K A ++++ + + S+
Sbjct: 189 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 248
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D L E A K++VFVGNL
Sbjct: 249 NAYVVFKDESAAAKALQRNGAQIAEGFRIRVD--------LASETAS--RDKRSVFVGNL 298
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P+ ++D + + F CG S+ AVR++R+P VG+G YVLF
Sbjct: 299 PYKIEDSALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLF 339
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 114/203 (56%), Gaps = 23/203 (11%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 144 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 203
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 204 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 263
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ I + F CG S
Sbjct: 264 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 307
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
+ AVR++R +GKG YVLF
Sbjct: 308 IMAVRIVRDKMTGIGKGFGYVLF 330
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 114/203 (56%), Gaps = 23/203 (11%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 149 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 208
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 209 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 268
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ I + F CG S
Sbjct: 269 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 312
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
+ AVR++R +GKG YVLF
Sbjct: 313 IMAVRIVRDKMTGIGKGFGYVLF 335
>gi|62078761|ref|NP_001014037.1| RNA-binding protein 34 [Rattus norvegicus]
gi|76363312|sp|Q5M9F1.1|RBM34_RAT RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|56541178|gb|AAH87155.1| RNA binding motif protein 34 [Rattus norvegicus]
gi|149043245|gb|EDL96777.1| RNA binding motif protein 34 [Rattus norvegicus]
Length = 428
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 19/167 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+++SVR RSV + + +K A ++++ + + S+
Sbjct: 183 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSI 242
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E++ AL N A I G IR+D L E A K++VFVGNL
Sbjct: 243 NAYVVFKEERAAAKALQRNGAQIAEGFRIRVD--------LASETA--SRDKRSVFVGNL 292
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P+ V + + + F CG S+ AVR++R+P VG+G YVLF
Sbjct: 293 PYRVDESALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLF 333
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 114/203 (56%), Gaps = 23/203 (11%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 178 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 237
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 238 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 297
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ I + F CG S
Sbjct: 298 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 341
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
+ AVR++R +GKG YVLF
Sbjct: 342 IMAVRIVRDKMTGIGKGFGYVLF 364
>gi|351694564|gb|EHA97482.1| RNA-binding protein 34 [Heterocephalus glaber]
Length = 428
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 23/182 (12%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+ + + +K
Sbjct: 172 VNQEEERLKNE----RTLFVGNLPITCNKKKLKSFFKEYGQIESVRFRSLIPAEGTVSKK 227
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK E + AL N A I G IR+D A +
Sbjct: 228 LAAIKRKIHPDQKNINAYVVFKEESAATKALKRNGAQIADGFRIRVDLASETSSR----- 282
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VF+GNLP+ V++ + + F CG S+ AVR++R P VGKG YV
Sbjct: 283 -----DKRSVFIGNLPYKVEETAVEEHFLDCG------SIVAVRIVRDPVTGVGKGFGYV 331
Query: 388 LF 389
LF
Sbjct: 332 LF 333
>gi|327262180|ref|XP_003215903.1| PREDICTED: RNA-binding protein 34-like [Anolis carolinensis]
Length = 377
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 20/170 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS-VPIIDTKIPRKGAILQKQINENADS 284
RT+FVGNLP+ ++ L F ++G+I+S+R RS +P DT + +K A ++++ + N
Sbjct: 133 RTVFVGNLPVSCTEQMLKAFFREYGQIESIRFRSLIPSEDT-LSKKLAAIKRKFHPNRKY 191
Query: 285 VHAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
++AYIVFK E + AL N G HIR+D A + +D K++VFVGN
Sbjct: 192 INAYIVFKEEHAANDALKCNGTEFCSGFHIRVDLA---------SKSTCHDNKRSVFVGN 242
Query: 344 LPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
LP+ + D+ + F CG +V VR++R +GKG YVLF+T
Sbjct: 243 LPYAIDDDTVRTHFSQCG------NVMGVRIVRDQRTGIGKGFGYVLFET 286
>gi|50555293|ref|XP_505055.1| YALI0F05918p [Yarrowia lipolytica]
gi|74689345|sp|Q6C2Q7.1|NOP12_YARLI RecName: Full=Nucleolar protein 12
gi|49650925|emb|CAG77862.1| YALI0F05918p [Yarrowia lipolytica CLIB122]
Length = 509
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 19/169 (11%)
Query: 227 TIFVGNLPLKV-KKKTLIKEF----IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
TIFVGN+ +V KT+ F G + SVR RS+ +PRK A + +Q +
Sbjct: 169 TIFVGNVSSEVITDKTVYNNFKALFAAIGTVASVRFRSISFSKL-LPRKVAFISQQFHSK 227
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
D+V+AYIVFK+ +S + AL N +V G H+R+D P D K+ VFV
Sbjct: 228 RDTVNAYIVFKNVKSVKGALTLNGSVFKGFHMRVDSVAHP---------GAQDHKRCVFV 278
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
G L F+ ++E +++ F D VE VR++R P VGKG AYV FK
Sbjct: 279 GALDFEEQEESLWEAFSSCGD----VEYVRIVRDPKTNVGKGFAYVQFK 323
>gi|344303112|gb|EGW33386.1| hypothetical protein SPAPADRAFT_50271 [Spathaspora passalidarum
NRRL Y-27907]
Length = 463
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 99/170 (58%), Gaps = 17/170 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKE-----FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V LI + F +G++DS+R RS+ + +PRK + +K +++
Sbjct: 167 RTVFVGNVPASVITSKLIAKQFKNLFKAYGKVDSMRFRSISF-EENLPRKISFAKKNLHK 225
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AY+VFK + ++ + N V +H+R+D P K D K+++F
Sbjct: 226 SRDSVNAYVVFKEKGASMDSRKLNGTVFEDHHLRVDHVAHPAAK---------DTKRSIF 276
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VGNL F+ K++ +++ F L++ VE+VR+IR +GKG A V FK
Sbjct: 277 VGNLDFEEKEDNLWKYFN--KKLDNDVESVRIIRDSKTNLGKGFALVQFK 324
>gi|380026003|ref|XP_003696751.1| PREDICTED: uncharacterized protein LOC100864850 [Apis florea]
Length = 632
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 96/167 (57%), Gaps = 16/167 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFVGNLP V KK L K F +FG+ID++R+R + ++ A ++ +++ SV
Sbjct: 348 RTIFVGNLPKDVTKKKLRKLFKQFGKIDTIRLRGKIAKSVNVSKRVAAIKNELHPKLKSV 407
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYI F S++S + +L+ N GN++R++ + K +D KK++F+GNL
Sbjct: 408 YAYIKFVSKESVKESLSINGTEFEGNYLRVNASNKSENK--------FDSKKSIFLGNLH 459
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+++ D I + F CG +E+VRV+R VGKG YV FK
Sbjct: 460 YNIDDNTIIKHFKQCG------EIESVRVVRDNKTGVGKGFGYVNFK 500
>gi|194042563|ref|XP_001925470.1| PREDICTED: RNA-binding protein 34 [Sus scrofa]
Length = 424
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 23/189 (12%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N + +++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 163 NPRRKIQTNKEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 218
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N A I G IR+D A
Sbjct: 219 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAAAKALERNGAQIADGFRIRVDLASETS 278
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ V++ + + F CG SV AVR++R P V
Sbjct: 279 SR----------DKRSVFVGNLPYKVEESAVEKHFLDCG------SVVAVRIVRDPVTGV 322
Query: 381 GKGIAYVLF 389
G+G YVLF
Sbjct: 323 GRGFGYVLF 331
>gi|145482073|ref|XP_001427059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394138|emb|CAK59661.1| unnamed protein product [Paramecium tetraurelia]
Length = 347
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 19/176 (10%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII------DTKIPRKGAI 273
D ++ RT+FVGN+ + KK + K F ++GEI+ V RS+P+ + K+P + A+
Sbjct: 60 DADRIKRTLFVGNVSINAKKNDMRKLFTQYGEIEKVWFRSIPVDRKTKKENVKLPVRAAV 119
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
L +I E A S + YI+FK +S ++A + + H+R C L+G+
Sbjct: 120 LMGKIQEGAQSQNCYILFKDVKSAKSATQQDGQLFMNLHLR----CT----LEGQKKK-- 169
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
D KT FVGNLPFD+++EE+ + F + + VRVI+ P VGKG YV F
Sbjct: 170 DHIKTAFVGNLPFDIEEEEVRKAF---EEAFGEINYVRVIKDPQRHVGKGFGYVCF 222
>gi|254581390|ref|XP_002496680.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
gi|238939572|emb|CAR27747.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
Length = 441
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 133/243 (54%), Gaps = 35/243 (14%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF---- 218
K++ +KR E + +E++Y ++E + G+ K+A+ +D R +EG
Sbjct: 96 KSQSKKRHSDEDEGLEERYFAKLMDQEPAE-DAGDADKQAEKPQQD---ERPQEGAKKID 151
Query: 219 ---DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKFGE----IDSVRIRSVPIIDTKIPRK 270
D+ K RT+FVGN+P V K+L ++F K + ++S+R RS+ + +PRK
Sbjct: 152 LKEDELEKAERTVFVGNVPADVIPNKSLHRQFKKLFQDEKGLESIRFRSISF-EVPLPRK 210
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGED 329
A +Q++++++ SV+AY+V+K++ S + + N V H+R+D P K
Sbjct: 211 VAFVQQKLHKSRGSVNAYVVYKNKNSVSSVCSRLNGQVFVDRHLRVDSVTHPAK------ 264
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
+D K++VFVGNL F+ +E +++ F CG +E VR+IR P +GKG AYV
Sbjct: 265 ---HDNKRSVFVGNLDFEEDEESLWRHFGSCG------EIEYVRIIRDPKTNMGKGFAYV 315
Query: 388 LFK 390
FK
Sbjct: 316 QFK 318
>gi|417410496|gb|JAA51720.1| Putative splicing factor, partial [Desmodus rotundus]
Length = 412
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 126/252 (50%), Gaps = 44/252 (17%)
Query: 162 KKTKKRKRDDVEKD--YVEKKYGVIAKEEEGKKVGVGEKRK------------------- 200
KK K +K D EK Y E EEE G+KRK
Sbjct: 88 KKVKVKKLSDAEKQLAYRENALASADLEEEETHQKQGQKRKMSQPGVKAADKQVLDDVDY 147
Query: 201 KADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV 260
A N+ + + ++ +EE +E RT+FVGNLP+ KK L F ++G I+SVR RSV
Sbjct: 148 PAVNQRKKIQINPEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGPIESVRFRSV 203
Query: 261 PIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRAC 319
+ + +K A+++++I+ + +++AY+VFK E++ AL N A I G +R+D A
Sbjct: 204 IPAEGTMSKKLAVIKRKIHPDQKNINAYVVFKDERAATKALNRNGAQIADGFRVRVDLAS 263
Query: 320 PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPH 377
+ K++VFVGNLP+ V + + F CG ++ AVR++R P
Sbjct: 264 ETSSR----------DKRSVFVGNLPYKVGESAVEHHFLDCG------NIVAVRIVRDPL 307
Query: 378 MRVGKGIAYVLF 389
VG+G YVLF
Sbjct: 308 TGVGRGFGYVLF 319
>gi|448091708|ref|XP_004197396.1| Piso0_004648 [Millerozyma farinosa CBS 7064]
gi|448096281|ref|XP_004198427.1| Piso0_004648 [Millerozyma farinosa CBS 7064]
gi|359378818|emb|CCE85077.1| Piso0_004648 [Millerozyma farinosa CBS 7064]
gi|359379849|emb|CCE84046.1| Piso0_004648 [Millerozyma farinosa CBS 7064]
Length = 450
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 18/174 (10%)
Query: 223 KLLRTIFVGNLPLKV--KKKTLIK---EFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ 277
K+ RT+FVGN+ KV KK L K F +FG+++S+R+RS+ D K+PRK A ++K
Sbjct: 163 KVSRTVFVGNVTSKVITDKKVLRKFKKLFSQFGKVESIRLRSISFAD-KVPRKVAFVKKT 221
Query: 278 INENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
++E + +AY+VF + S + N V H+R+D P K D K
Sbjct: 222 LDETRATANAYVVFAEKPASLKCVPELNATVFEDFHLRVDHLAHPSK---------TDNK 272
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+TVF+GNL F+ +E +++ F +++ + VEAVR++R P GKG A+V FK
Sbjct: 273 RTVFIGNLSFEESEETLWRYFNEVSN--NDVEAVRIVRDPKTNFGKGFAFVQFK 324
>gi|167531199|ref|XP_001748165.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773285|gb|EDQ86926.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 36/187 (19%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA----ILQKQI 278
+ RTIFVGNLP VK K L + F GEI+S+R+R+V + A L+K++
Sbjct: 100 RTARTIFVGNLPATVKAKALKELFADCGEIESIRLRTVVRCCCPLAVSPAYADPALRKRL 159
Query: 279 NENADSVHAYIVFKSEQSTEAALAF--------------NMAVIGGNHIRLDRACPPRKK 324
S++AY+VF ++ + AL N G+H+R+ RA
Sbjct: 160 ASEQSSMNAYVVFTADAAVTQALTLFSPGMPLADIWTFSNGVEFQGHHLRVTRA------ 213
Query: 325 LKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGK 382
+ +D+ +++FVGNLPFD +EE++ F CG +VE VR++R +GK
Sbjct: 214 ----ETKTFDLHRSIFVGNLPFDASEEELHGAFDSCG------TVEGVRIVRDKKYAIGK 263
Query: 383 GIAYVLF 389
G AYVLF
Sbjct: 264 GFAYVLF 270
>gi|402858632|ref|XP_003893797.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 4B, partial [Papio anubis]
Length = 1816
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 22/197 (11%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
RK D+ + ++ RK+ ++E + L RT+FVGNLP+ KK L F ++G+I+SV
Sbjct: 1542 RKILDDVDDTVVSQRKKIQINEEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESV 1601
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I G IR
Sbjct: 1602 RFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIR 1661
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D A + K++VFVGNLP+ V + + + F CG SV AVR+
Sbjct: 1662 VDLASETSSR----------DKRSVFVGNLPYKVAESAVEKHFLDCG------SVMAVRI 1705
Query: 373 IRHPHMRVGKGIAYVLF 389
+R +GKG YVLF
Sbjct: 1706 VRDQVTGIGKGFGYVLF 1722
>gi|345798762|ref|XP_536341.3| PREDICTED: RNA-binding protein 34 [Canis lupus familiaris]
Length = 428
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 23/189 (12%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+IDSVR RS+
Sbjct: 166 NQRKKIEINQEEEKLKNE----RTVFVGNLPVTCNKKKLKSFFREYGQIDSVRFRSLIPA 221
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + ++AY+VFK E S AL N A I G IR+D A
Sbjct: 222 EGTLSKKLAAIKRKIHPDQKYINAYVVFKDESSATKALKRNGAQIADGFRIRVDLASETS 281
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ V++ + + F CG S+ AVR++R V
Sbjct: 282 SR----------DKRSVFVGNLPYKVEESAVEEHFLDCG------SIVAVRIVRDRVTGV 325
Query: 381 GKGIAYVLF 389
G+G YVLF
Sbjct: 326 GRGFGYVLF 334
>gi|301111538|ref|XP_002904848.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
gi|262095178|gb|EEY53230.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
Length = 382
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 26/185 (14%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG-------A 272
DE K RT+FVGN+ L +K + K F G+++SVR+R +PI + G
Sbjct: 68 DELKERRTVFVGNVSLDATQKDIKKHFSVCGQVESVRLRHLPIAGCAVGDAGNQKLMMKV 127
Query: 273 ILQKQINENA-DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
K+I A D+ +AY+ F E S EAA+ N + IR+DR P
Sbjct: 128 CANKKILTTAKDNCNAYVTFVEESSAEAAIKLNGTTLVQMKIRVDRC-----------EP 176
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS-----VEAVRVIRHPHMRVGKGIAY 386
+ D +++VF+GN+PF DE+I+Q F L L+S +E VR+IR +GKG Y
Sbjct: 177 VIDARRSVFIGNVPFKCTDEQIFQFF--LKRLKSDDEPEPIENVRLIRDRESGLGKGFGY 234
Query: 387 VLFKT 391
+L KT
Sbjct: 235 LLLKT 239
>gi|312075541|ref|XP_003140463.1| RNA recognition domain-containing protein [Loa loa]
gi|307764379|gb|EFO23613.1| RNA recognition domain-containing protein [Loa loa]
Length = 359
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 18/165 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGN PL +K + K F +FG ++SVR+ + KI +K + I S+
Sbjct: 133 RTVFVGNAPLSSSRKGIKKLFSQFGAVESVRLHCFIAANEKITKK-----RDIPSGVRSL 187
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ +S EAALA N GN +R+D C RK Y+ + TVFVGNLP
Sbjct: 188 TFYVKFKNAKSKEAALALNGEKYDGNLLRVDSCCAKRK---------YNCRTTVFVGNLP 238
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+DV + E+ F ++ +V VR++R KG A+V FK
Sbjct: 239 YDVSENELIAHF----EMSGNVSFVRIVRDSRTGNSKGFAFVAFK 279
>gi|383872573|ref|NP_001244577.1| RNA-binding protein 34 [Macaca mulatta]
gi|380810788|gb|AFE77269.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
gi|383416755|gb|AFH31591.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
Length = 427
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 22/197 (11%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
RK D+ + ++ RK+ ++E + L RT+FVGNLP+ KK L F ++G+I+SV
Sbjct: 155 RKILDDVDDTVISQRKKIQINEEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESV 214
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I G IR
Sbjct: 215 RFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIR 274
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D A + K++VFVGNLP+ V + + + F CG SV AVR+
Sbjct: 275 VDLASETSSR----------DKRSVFVGNLPYKVAESAVEKHFLDCG------SVMAVRI 318
Query: 373 IRHPHMRVGKGIAYVLF 389
+R +GKG YVLF
Sbjct: 319 VRDQVTGIGKGFGYVLF 335
>gi|410917640|ref|XP_003972294.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 399
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 151/310 (48%), Gaps = 41/310 (13%)
Query: 91 DAEGAATKTLSLSNKSTKLIYPRSILGFEP----NGTIENEIKKEHSSNVGSESYLNRQK 146
D+ +AT +L + P ++L F P + + E+KK+ + V + L ++
Sbjct: 23 DSAASATPLSALFGSAA----PATMLVFHPPAEVSASTSPEVKKKKPAEVSGQPGLTCKR 78
Query: 147 QNSNFSVEGKKRSENKKTKKR--KRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADN 204
+N + +KR E ++ D+ +K KK EE+G + V EKR++
Sbjct: 79 KN-KIQSKAEKRLEGREMGLHIADEDERQKKTSVKKTRKHDAEEKGVEHWV-EKRQRKRA 136
Query: 205 ETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIID 264
E+ RK RT+FVGNLP KKTL F G I+S+R RSV D
Sbjct: 137 RKEEEAQKRK-----------RTVFVGNLPSSCSKKTLQNLFRDEGSIESIRFRSVVRED 185
Query: 265 TKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGN-HIRLDRACPPRK 323
+ RK A+++++I+ S++AY+VFK E AL N I + +IR+D+
Sbjct: 186 PSMSRKVAVIKRKIHPKKQSMNAYVVFKDEGGVTRALERNGLEIEKDFYIRVDKVV---- 241
Query: 324 KLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVG 381
+D K++VFVGNL FD+ + F CG SVEAVR++R + +G
Sbjct: 242 -----KNSSHDHKRSVFVGNLSFDINELAFRHHFEDCG------SVEAVRLVRDQNSGLG 290
Query: 382 KGIAYVLFKT 391
KG Y+LFK+
Sbjct: 291 KGFGYILFKS 300
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 23/203 (11%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++ ED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 149 GVKVADRKILDDIEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 208
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 209 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 268
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ + + F CG S
Sbjct: 269 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAVEKHFLDCG------S 312
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
+ AVR++R +GKG YVLF
Sbjct: 313 IMAVRIVRDKMTGIGKGFGYVLF 335
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 23/189 (12%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 172 NQRKKIEINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 227
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N G +R+D A
Sbjct: 228 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALKRNGTQFADGFRVRVDLASETS 287
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ V++ I + F CG S+ AVR++R P V
Sbjct: 288 SR----------DKRSVFVGNLPYKVEESAIEEHFLDCG------SIVAVRIVRDPATGV 331
Query: 381 GKGIAYVLF 389
G+G YVLF
Sbjct: 332 GRGFGYVLF 340
>gi|150865243|ref|XP_001384380.2| hypothetical protein PICST_59522 [Scheffersomyces stipitis CBS
6054]
gi|149386499|gb|ABN66351.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 447
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 95/171 (55%), Gaps = 19/171 (11%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RTIFVGN+ K+K K K F FG IDSVR RS+ +PRK AI K +++
Sbjct: 146 RTIFVGNVTAEVITSKIKTKNFKKFFSDFGAIDSVRFRSISF--EGLPRKVAIATKNLHK 203
Query: 281 NADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+ + +AY+VFK E S +A N V H+R+D P AP D ++T+
Sbjct: 204 SRGTCNAYVVFKEKEASLKAVSGANAKVFENFHLRVDHVAHP--------AP-KDNRRTI 254
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
FVGNL F+ ++E +++ F L++ VE+VRV+R VGKG A V FK
Sbjct: 255 FVGNLDFEEEEENLWRYFN--TKLDNDVESVRVVRDSKTNVGKGFALVQFK 303
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 104/182 (57%), Gaps = 23/182 (12%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+ + + +K
Sbjct: 1559 INQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKK 1614
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK E + AL N A I G IR+D A +
Sbjct: 1615 LAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR----- 1669
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VFVGNLP+ V++ + + F CG S+ AVR++R +GKG YV
Sbjct: 1670 -----DKRSVFVGNLPYKVEESAVEKHFLDCG------SIMAVRIVRDKMTGIGKGFGYV 1718
Query: 388 LF 389
LF
Sbjct: 1719 LF 1720
>gi|395531593|ref|XP_003767862.1| PREDICTED: RNA-binding protein 34 [Sarcophilus harrisii]
Length = 438
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 19/167 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KKK L F ++G+I+ VR RS+ + + +K A ++++++ S+
Sbjct: 192 RTVFVGNLPVTCKKKELKSFFKEYGQIECVRFRSLIPAKSNLSKKIAAIKREVHPEQKSI 251
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ Y+VFK E + E AL N A I G IR++ D PL K++VFVGNL
Sbjct: 252 NGYVVFKEESAAEKALKRNGAQIAEGFPIRVELI---------SDTPLRS-KRSVFVGNL 301
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P+ +++ I + F CG SV AV+++R+ +GKG YVLF
Sbjct: 302 PYKIEETAIQEHFSDCG------SVLAVKLVRNKVTGIGKGCGYVLF 342
>gi|66804529|ref|XP_635997.1| hypothetical protein DDB_G0289941 [Dictyostelium discoideum AX4]
gi|60464334|gb|EAL62483.1| hypothetical protein DDB_G0289941 [Dictyostelium discoideum AX4]
Length = 481
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 13/168 (7%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIK-FGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
RT+FV N+ L K +K+ K FG+I+S+R RS+P+ RK ++K+ +E ++
Sbjct: 257 RTVFVSNINLNHAKDNELKQLFKPFGQIESIRFRSIPLSSIDGNRKETFIKKEFHEKRET 316
Query: 285 VHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+AYIVFK + +AA N G H+R+D A K K DA KT+F+GN
Sbjct: 317 CNAYIVFKQIADAKKAAKQMNGKEAFGKHLRVDMA--DHKPTKASDA------KTIFIGN 368
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+P++ ++EE++ +F + V +VR+IR H +GKG YV F T
Sbjct: 369 IPYETEEEELFLIF---DKTFGDVVSVRIIRDSHTNIGKGFGYVNFST 413
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 114/203 (56%), Gaps = 23/203 (11%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++ ED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 178 GVKVADRKILDDIEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 237
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 238 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 297
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + D K++VFVGNLP+ V++ + + F CG S
Sbjct: 298 DGFRIRVDLAS----ETSSRD------KRSVFVGNLPYKVEESAVEKHFLDCG------S 341
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
+ AVR++R +GKG YVLF
Sbjct: 342 IMAVRIVRDKMTGIGKGFGYVLF 364
>gi|146416983|ref|XP_001484461.1| hypothetical protein PGUG_03842 [Meyerozyma guilliermondii ATCC
6260]
Length = 442
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 25/227 (11%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIF 229
DD+E Y + + K+ K + R + V KE+ FD K RT+F
Sbjct: 116 DDIEGKY----FQALNKDTHPKNTDEKKDRTRTPKVATATKVDLKEDEFD---KAERTVF 168
Query: 230 VGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
VGN+P V +K K F + G ++SVR RS+ + +PRK A QK+++ DS
Sbjct: 169 VGNVPATVVTSKSTQKQFKKLFSEVGPVESVRFRSIAFGEA-LPRKAAFAQKKLHGARDS 227
Query: 285 VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
V+AY+V+K + + A++ N +H+R+D P K D K+T+FVGN
Sbjct: 228 VNAYVVYKEKTPSRNAVSRLNAREFDHHHLRVDHVAHPVAK---------DNKRTIFVGN 278
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
L F+ +EE+++ F D + VE+VRV+R +GKG A V FK
Sbjct: 279 LDFEALEEELWRYFNLHTD--NDVESVRVVRDSKTNLGKGFALVQFK 323
>gi|432106224|gb|ELK32110.1| AT-rich interactive domain-containing protein 4B [Myotis davidii]
Length = 1743
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
RK +E + + RK+ + E + L RT+FVGNLP+ KK L F ++G I+SV
Sbjct: 1470 RKTLGDEDDTAVSQRKKTQMNPEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGPIESV 1529
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RSV + + +K A ++++I+ + +++AY+VFK E + AL N I G +R
Sbjct: 1530 RFRSVIPAEGTMSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALNRNGTQIADGFRVR 1589
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D A + K++VFVGNLP+ ++D + F CG ++ AVR+
Sbjct: 1590 VDLASETSSR----------DKRSVFVGNLPYKIEDAVVEDHFLDCG------NIVAVRI 1633
Query: 373 IRHPHMRVGKGIAYVLF 389
+R P VG+G YVLF
Sbjct: 1634 VRDPLTGVGRGFGYVLF 1650
>gi|281341646|gb|EFB17230.1| hypothetical protein PANDA_016323 [Ailuropoda melanoleuca]
Length = 428
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 23/189 (12%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE ++ RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 167 NQRKKIEINQEEERLKNQ----RTVFVGNLPVTCNKKKLKSFFREYGQIESVRFRSLIPA 222
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N A I G IR+D A
Sbjct: 223 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALKRNGAQIADGFRIRVDLAS--- 279
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
D D K++VFVGNLP+ V++ + + F CG S+ AVR++R V
Sbjct: 280 ------DTSSRD-KRSVFVGNLPYKVEESAVEEHFLDCG------SIVAVRIVRDRVTGV 326
Query: 381 GKGIAYVLF 389
G+G YVLF
Sbjct: 327 GRGFGYVLF 335
>gi|334322146|ref|XP_001378610.2| PREDICTED: RNA-binding protein 34-like [Monodelphis domestica]
Length = 510
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 19/167 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KKK L F ++G+I+ VR RS+ + + +K A ++++++ S+
Sbjct: 173 RTVFVGNLPVTCKKKELKSFFKEYGQIECVRFRSLIPAKSTLSKKIAAIKREVHPEQKSI 232
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ Y+VFK E + E AL N A I G +R++ D PL K++VFVGNL
Sbjct: 233 NGYVVFKEESAAEKALKRNGAQIAEGFPVRVELI---------SDTPLRG-KRSVFVGNL 282
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P+ +++ I + F CG SV AV+++R+ VGKG YVLF
Sbjct: 283 PYKIEEAAIQEHFSDCG------SVLAVKIVRNKVTGVGKGCGYVLF 323
>gi|301782455|ref|XP_002926642.1| PREDICTED: RNA-binding protein 34-like [Ailuropoda melanoleuca]
Length = 430
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 23/189 (12%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE ++ RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 169 NQRKKIEINQEEERLKNQ----RTVFVGNLPVTCNKKKLKSFFREYGQIESVRFRSLIPA 224
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N A I G IR+D A
Sbjct: 225 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALKRNGAQIADGFRIRVDLAS--- 281
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
D D K++VFVGNLP+ V++ + + F CG S+ AVR++R V
Sbjct: 282 ------DTSSRD-KRSVFVGNLPYKVEESAVEEHFLDCG------SIVAVRIVRDRVTGV 328
Query: 381 GKGIAYVLF 389
G+G YVLF
Sbjct: 329 GRGFGYVLF 337
>gi|344278331|ref|XP_003410948.1| PREDICTED: RNA-binding protein 34 [Loxodonta africana]
Length = 433
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 107/189 (56%), Gaps = 23/189 (12%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + V+++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 170 NQRKKIQVNQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 225
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N I G IR+D A
Sbjct: 226 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALKRNGTQIADGFRIRVDLASETS 285
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ +++ + + F CG SV AVR++R V
Sbjct: 286 SR----------DKRSVFVGNLPYKIEESMVEKHFLDCG------SVVAVRIVRDQVTGV 329
Query: 381 GKGIAYVLF 389
GKG YVLF
Sbjct: 330 GKGFGYVLF 338
>gi|403347285|gb|EJY73063.1| RNA-binding protein 34 [Oxytricha trifallax]
Length = 412
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 21/171 (12%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQINENADS 284
RT FVGN+PL+ + K L+K F +G + + RS+ ++KI KG I++K+ DS
Sbjct: 127 RTTFVGNVPLETESKDLMKLFKPYGNVVKIWFRSIACDHESKITHKGKIIKKEYGLQKDS 186
Query: 285 VHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+AY++FK+++S +AA N +G H+R+D D T+F+GN
Sbjct: 187 KNAYVLFKTKESAIKAAENLNQIQLGNKHLRVDTENQEN-----------DYDTTIFIGN 235
Query: 344 LPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
LP+ + DE++ F CG + VRV+R +GKGIAYV FKT+
Sbjct: 236 LPWVLNDEDLRAHFEDCG------KILNVRVVRDKDNFIGKGIAYVQFKTK 280
>gi|374106883|gb|AEY95792.1| FACR274Wp [Ashbya gossypii FDAG1]
Length = 426
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 39/191 (20%)
Query: 222 GKLLRTIFVGNLPLK-VKKKTLIKEFIKF--------------------GEIDSVRIRSV 260
K RT+FVGN+P + + K + KEF + ++S+R RS+
Sbjct: 133 AKAERTVFVGNVPHEAITDKKVYKEFKQLVAQRKLSKEDEDDEEQKAEKYAVESIRFRSI 192
Query: 261 PIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
+ +PRK A +Q++++ DSV+AY+V+ +++ AA N +V +H+R D
Sbjct: 193 -AFEEALPRKVAFVQQKLHHTRDSVNAYVVYAEKEAVTAACKLNGSVFHDHHLRFDSVAH 251
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHM 378
P AP +D K++VFVGNL F+ +E +++ F CG +E VR++R P
Sbjct: 252 P--------AP-HDRKRSVFVGNLDFEESEESLWKHFMSCG------PIEYVRIVRDPKT 296
Query: 379 RVGKGIAYVLF 389
VGKG AYV F
Sbjct: 297 NVGKGFAYVQF 307
>gi|45185960|ref|NP_983676.1| ACR274Wp [Ashbya gossypii ATCC 10895]
gi|74694749|sp|Q75BJ7.1|NOP12_ASHGO RecName: Full=Nucleolar protein 12
gi|44981750|gb|AAS51500.1| ACR274Wp [Ashbya gossypii ATCC 10895]
Length = 426
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 39/191 (20%)
Query: 222 GKLLRTIFVGNLPLK-VKKKTLIKEFIKF--------------------GEIDSVRIRSV 260
K RT+FVGN+P + + K + KEF + ++S+R RS+
Sbjct: 133 AKAERTVFVGNVPHEAITDKKVYKEFKQLVAQRKLSKEDEDDEEQKAEKYAVESIRFRSI 192
Query: 261 PIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
+ +PRK A +Q++++ DSV+AY+V+ +++ AA N +V +H+R D
Sbjct: 193 -AFEEALPRKVAFVQQKLHHTRDSVNAYVVYAEKEAVTAACKLNGSVFHDHHLRFDSVAH 251
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHM 378
P AP +D K++VFVGNL F+ +E +++ F CG +E VR++R P
Sbjct: 252 P--------AP-HDRKRSVFVGNLDFEESEESLWKHFMSCG------PIEYVRIVRDPKT 296
Query: 379 RVGKGIAYVLF 389
VGKG AYV F
Sbjct: 297 NVGKGFAYVQF 307
>gi|403218189|emb|CCK72680.1| hypothetical protein KNAG_0L00570 [Kazachstania naganishii CBS
8797]
Length = 431
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 114/219 (52%), Gaps = 38/219 (17%)
Query: 194 GVGEKRKKADNETEDMLVHRKEEGF-----DDE-GKLLRTIFVGNLPLK-VKKKTLIKEF 246
G E K D E + V R E+ DDE K RT+FVGNL + + KTL KEF
Sbjct: 101 GETENSLKDDGYVETVKVARAEQAKVLDLKDDELAKAERTVFVGNLANELISSKTLYKEF 160
Query: 247 IKF-------GE-----IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSE 294
K G+ IDS+R RS+ D +PRK A +Q++++++ DS++AYIV+K++
Sbjct: 161 KKLFSTNPKEGQDKALAIDSIRFRSISF-DEPLPRKVAFVQQKLHKSRDSINAYIVYKTK 219
Query: 295 QSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEI 353
+ + N H+R+D P K +D +++VF+GNL F+ +E +
Sbjct: 220 DAVKLVCQKLNGVEFHNRHLRVDSVSHPTK---------HDKQRSVFIGNLDFEEDEETL 270
Query: 354 YQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
++ F CG +E VR++R VGKG AYV FK
Sbjct: 271 WKHFATCG------PIEYVRIVRDSKTNVGKGFAYVQFK 303
>gi|348575610|ref|XP_003473581.1| PREDICTED: RNA-binding protein 34-like [Cavia porcellus]
Length = 430
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 30/197 (15%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G +RKK + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SV
Sbjct: 165 GSQRKK-------IPINQEEERLKNE----RTVFVGNLPVTYNKKKLKSFFKEYGQIESV 213
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RS+ + + +K A ++++I+ + +++AY+VFK+E + AL N A I G HIR
Sbjct: 214 RFRSLIPAEGTVSKKLAAIKRKIHPDQKNINAYVVFKNESAATKALKSNGAEIADGFHIR 273
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D A K++VFVGNLP+ V++ + + F CG S+ AVR+
Sbjct: 274 VDLA----------SKSSSRDKRSVFVGNLPYKVEETAVKEHFLDCG------SIVAVRL 317
Query: 373 IRHPHMRVGKGIAYVLF 389
+R VGKG YVLF
Sbjct: 318 VRDRVTGVGKGFGYVLF 334
>gi|224047848|ref|XP_002191823.1| PREDICTED: RNA-binding protein 34 [Taeniopygia guttata]
Length = 428
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 96/168 (57%), Gaps = 20/168 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS-VPIIDTKIPRKGAILQKQINENADS 284
RT+FVGNLP+ + L F K+G I S+R RS +P DT + +K A ++ +++ NA S
Sbjct: 173 RTVFVGNLPVSCTIQVLTSLFKKYGRIQSIRFRSLIPAEDT-VSKKVAAIKHKVHPNAKS 231
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
V+AY+VFK E + AL N I G HIR+D A L+D K++VFVGN
Sbjct: 232 VNAYVVFKEECDAQNALKENGTEIASGFHIRVDTAS---------KTSLHDNKRSVFVGN 282
Query: 344 LPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
L +D++D+ + + F CG + VRV+R +GKG YVLF
Sbjct: 283 LSYDIRDDAVREHFQVCG------DIVGVRVVRDRRTGLGKGFGYVLF 324
>gi|296230931|ref|XP_002760846.1| PREDICTED: RNA-binding protein 34 [Callithrix jacchus]
Length = 429
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 23/182 (12%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+ + + +K
Sbjct: 174 INQEEERLKNE----RTVFVGNLPVTCDKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKK 229
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK + AL N A I G IR+D A
Sbjct: 230 LAAIKRKIHPDQKNINAYVVFKDGSAATQALKRNGAQIADGFRIRVDLA----------S 279
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
A K++VFVGNLP+ V++ + + F CG S+ AVR++R +GKG YV
Sbjct: 280 ATSSRDKRSVFVGNLPYKVEESAVEKHFLDCG------SIMAVRIVRDQVTGIGKGFGYV 333
Query: 388 LF 389
LF
Sbjct: 334 LF 335
>gi|355715678|gb|AES05401.1| RNA binding motif protein 34 [Mustela putorius furo]
Length = 398
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 108/189 (57%), Gaps = 23/189 (12%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 137 NQRKKIEINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFREYGQIESVRFRSLIPA 192
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK + + AL N +I G IR+D A
Sbjct: 193 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDKSAATKALKRNGTLIADGFRIRVDLASETS 252
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ +++ + + F CG S+ AVR++R V
Sbjct: 253 SR----------DKRSVFVGNLPYKIEESAVEEHFLDCG------SIVAVRIVRDRVTGV 296
Query: 381 GKGIAYVLF 389
G+G YVLF
Sbjct: 297 GRGFGYVLF 305
>gi|440901028|gb|ELR52037.1| RNA-binding protein 34 [Bos grunniens mutus]
Length = 428
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 23/189 (12%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 167 NQRKKIQINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 222
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N A G +R+D A
Sbjct: 223 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALERNGAQFEEGFRVRVDLATETS 282
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ V++ + + F CG +V AVR++R V
Sbjct: 283 SR----------DKRSVFVGNLPYKVEESAVEKHFLACG------NVVAVRIVRDQVTGV 326
Query: 381 GKGIAYVLF 389
G+G YVLF
Sbjct: 327 GRGFGYVLF 335
>gi|294656141|ref|XP_458390.2| DEHA2C16170p [Debaryomyces hansenii CBS767]
gi|218511717|sp|Q6BTS9.2|NOP12_DEBHA RecName: Full=Nucleolar protein 12
gi|199430891|emb|CAG86472.2| DEHA2C16170p [Debaryomyces hansenii CBS767]
Length = 462
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 18/171 (10%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+ V K K F ++G+I S+R RS+ D +PRK A +K+++
Sbjct: 159 RTVFVGNVNASVVGSKPMYKKFKKLFSQYGKIQSIRFRSISFDDA-VPRKVAFAKKKLHS 217
Query: 281 NADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+ D+++AY+VF + E S + N H+R+D P AP D K+T+
Sbjct: 218 SRDTLNAYVVFAEKEPSLKCVPKLNATEFEHAHLRVDHVAHP--------AP-KDNKRTI 268
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
FVGNL F+ K+E +++ F D + VE+VRVIR VGKG A V FK
Sbjct: 269 FVGNLDFEEKEETLWRYFNSKTD--NDVESVRVIRDAKTNVGKGFALVQFK 317
>gi|348685768|gb|EGZ25583.1| hypothetical protein PHYSODRAFT_479368 [Phytophthora sojae]
Length = 379
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 27/191 (14%)
Query: 214 KEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG-- 271
KE +DE K RT+FVGN+ L +K + F G+++SVR+R +PI + G
Sbjct: 63 KEPTIEDE-KASRTVFVGNVSLDATQKDIKTHFSVCGKVESVRLRHMPIAGCAVGEAGNQ 121
Query: 272 -----AILQKQINENA-DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKL 325
K+I A D+ +AY++F E S E AL N ++ IR+DR+
Sbjct: 122 KLMMKVCANKKILTTAKDNCNAYVIFAEESSVEDALKLNGTILVQKKIRVDRS------- 174
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS-----VEAVRVIRHPHMRV 380
P+ D ++VFVGN+PF DE++ Q F L S +E VR+IR +
Sbjct: 175 ----TPVIDAHRSVFVGNVPFKCTDEQMQQFFA--KHLRSEEEPEPIENVRLIRDRESGL 228
Query: 381 GKGIAYVLFKT 391
GKG Y+L KT
Sbjct: 229 GKGFGYLLLKT 239
>gi|330801407|ref|XP_003288719.1| hypothetical protein DICPUDRAFT_79507 [Dictyostelium purpureum]
gi|325081234|gb|EGC34757.1| hypothetical protein DICPUDRAFT_79507 [Dictyostelium purpureum]
Length = 475
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 13/168 (7%)
Query: 226 RTIFVGNLPLK-VKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
RT+FV N+ L+ +K + +FI+FG+I+SVR RS+PI RK ++KQ +E D+
Sbjct: 265 RTVFVSNIKLENANEKDIKSKFIEFGKIESVRFRSIPISSIDANRKETFIKKQFHEKRDT 324
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+AYIVF +E S + A+ + N + G HIR+D A K K DA K VFVGN
Sbjct: 325 CNAYIVFDTEASAKKAVDSMNGKELFGKHIRVDLAS--HKPSKDSDA------KCVFVGN 376
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+P+++++EE++ N V +VR++R H +GKG YV F T
Sbjct: 377 VPYEIEEEELFL---LFNTTFGEVLSVRIVRDQHSNIGKGFGYVNFNT 421
>gi|308477111|ref|XP_003100770.1| hypothetical protein CRE_15490 [Caenorhabditis remanei]
gi|308264582|gb|EFP08535.1| hypothetical protein CRE_15490 [Caenorhabditis remanei]
Length = 393
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 97/165 (58%), Gaps = 11/165 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+F+GN+PL + +K++ K F FG I SVR+R++ ++ K+ ++ L ++N+ +S+
Sbjct: 142 KTVFIGNMPLTMNEKSVRKIFSDFGAISSVRMRNLIPVNEKLTKRVTHLSGKLNDKQNSL 201
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ + E+S E +L +N + + +R+D+ +K+ G+D +FVGNLP
Sbjct: 202 IFYVKYNDEESVEKSLKYNGTKLEDHIVRVDKVGSKKKEF-GKDL-------AIFVGNLP 253
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
FD+ ++ + F + VEAVR++R VGKG A+V FK
Sbjct: 254 FDITEDALITFFT---EQIGQVEAVRIVRDKATGVGKGFAFVNFK 295
>gi|328874715|gb|EGG23080.1| hypothetical protein DFA_05210 [Dictyostelium fasciculatum]
Length = 450
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 106/188 (56%), Gaps = 17/188 (9%)
Query: 206 TEDMLVHRKEE---GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI 262
TE+ RKE+ ++EGK RTIF+ N+ L + L + F K+G+++S R+RS+
Sbjct: 214 TEEDKTKRKEQDTKAREEEGK--RTIFLSNVELHTNPRELKQFFSKYGKVESARLRSIST 271
Query: 263 IDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPP 321
RK + + K+ NE ++ +AY+VF+ E+S + +A N + H+ +D A
Sbjct: 272 ESKDSNRKDSYINKKFNEKRETCNAYVVFEKEESAQKVVAECNGIIFKERHLYVDLAS-- 329
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG 381
K KG +++TVF+GN+PF+ ++EEI+ LF + VE+VR++R G
Sbjct: 330 HKHEKG------SVEETVFIGNVPFESENEEIFTLF---DHAFGGVESVRLVRDGQTGQG 380
Query: 382 KGIAYVLF 389
KG YVLF
Sbjct: 381 KGFGYVLF 388
>gi|260951259|ref|XP_002619926.1| hypothetical protein CLUG_01085 [Clavispora lusitaniae ATCC 42720]
gi|238847498|gb|EEQ36962.1| hypothetical protein CLUG_01085 [Clavispora lusitaniae ATCC 42720]
Length = 512
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 20/172 (11%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
+T+FVGN+ V K K F G++ S+R RS+ D +PRK A ++K ++
Sbjct: 189 KTVFVGNVSNNVITSRQTYKQFKKLFKSIGKVSSIRFRSIAF-DEAVPRKVAFVKKALHS 247
Query: 281 NADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
D+V+AY+VF + E S +AA N + +HIR+D P AP D K+T+
Sbjct: 248 TRDTVNAYVVFAEKEASMKAASRLNATIFDHHHIRVDHVAHP--------AP-KDNKRTI 298
Query: 340 FVGNLPFDVKDEEIYQLF-CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
FVGNL F+ ++E +++ F ND VE+VR++R +GKG A V FK
Sbjct: 299 FVGNLDFEEQEERLWRYFNSKTND---DVESVRIVRDSKTNLGKGFALVQFK 347
>gi|194206109|ref|XP_001915106.1| PREDICTED: RNA-binding protein 34 [Equus caballus]
Length = 428
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 19/167 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+I+SVR RS+ + +K A +++ I+ N ++
Sbjct: 185 RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTRSKKLAAIKRTIHPNQKNI 244
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK + + AL N A I G IR+D A + K++VFVGNL
Sbjct: 245 NAYVVFKDDSAAAKALKRNGAQIADGFRIRVDLASETSSR----------DKRSVFVGNL 294
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P+ V++ + + F CG + AVR++R VG+G YVLF
Sbjct: 295 PYKVEESAVEEHFLDCG------HIVAVRIVRDQVTGVGRGFGYVLF 335
>gi|328785951|ref|XP_003250682.1| PREDICTED: hypothetical protein LOC411091 [Apis mellifera]
Length = 642
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 96/167 (57%), Gaps = 16/167 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIFVGNLP V KK L K F +FG+ID++R+R + ++ A ++ +++ SV
Sbjct: 358 KTIFVGNLPKDVTKKKLKKIFKQFGKIDTIRLRGKIAKSANVSKRVAAIKNELHPKLKSV 417
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYI F S++S + +L+ N GN++R++ + K +D KK++F+GNL
Sbjct: 418 YAYIKFVSKESVKESLSMNGTEFEGNYLRVNASNKSENK--------FDSKKSIFLGNLH 469
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+++ D I + F CG +E+VRVIR VGKG YV FK
Sbjct: 470 YNIDDNTIIKHFKQCG------EIESVRVIRDNKTGVGKGFGYVNFK 510
>gi|189237665|ref|XP_001812360.1| PREDICTED: similar to RNA binding motif protein 34 [Tribolium
castaneum]
gi|270007816|gb|EFA04264.1| hypothetical protein TcasGA2_TC014554 [Tribolium castaneum]
Length = 369
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 95/169 (56%), Gaps = 17/169 (10%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
L RT+F+GNLP+ K + + F K+G ++SVRIR VP+ D K+P+K A+++++ + +
Sbjct: 109 LSRTVFIGNLPISSNTKQIKQFFKKYGNVESVRIRGVPVADPKLPKKVAMIKREFHPDRK 168
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
H YI F+S + + + +H+R+ C +++P D K +FVGN
Sbjct: 169 GFHGYIRFESRDDAIKSTEADGVLFQEHHLRV---C----MCDAKESP--DEDKAIFVGN 219
Query: 344 LPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
L F +++++++ F CG + +VR++R +GKG +V FK
Sbjct: 220 LSFYAEEDDLWKTFESCG------PIASVRIVRDGKTGIGKGFGFVNFK 262
>gi|281202984|gb|EFA77185.1| hypothetical protein PPL_12393 [Polysphondylium pallidum PN500]
Length = 487
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 92/165 (55%), Gaps = 12/165 (7%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIF+ N+ LK K L F +FG I + R RS+P+ RK + K+ +E ++ +
Sbjct: 266 TIFISNIDLKTTKNELKAFFGRFGTIKTARFRSLPVSKEGANRKATYINKEFHEKRETCN 325
Query: 287 AYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AY+V+ K E++ +AA N + HIR+D A K K E+ TVFVG +P
Sbjct: 326 AYVVYSKEEEAQKAADETNGTLFKERHIRVDLASNKHNKGKDEN--------TVFVGGIP 377
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+++++E++++LF D V +VR++R +GKG AYV FK
Sbjct: 378 YELENEDLFKLF---EDNIGDVMSVRIVRDKLTGLGKGFAYVEFK 419
>gi|291402150|ref|XP_002717371.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 430
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 104/185 (56%), Gaps = 23/185 (12%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK L F ++G I+SVR RS+ + + +K
Sbjct: 173 INQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGPIESVRFRSLIPAEGTLSKK 228
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK + + AL N I G IR+D A +
Sbjct: 229 LAAIKRKIHPDQKNINAYVVFKDQSAATKALERNGTHIADGFRIRVDLASETSSR----- 283
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VFVGNLP+ V++ + + F CG ++ AVR++R +GKG YV
Sbjct: 284 -----DKRSVFVGNLPYKVEETAVEEHFLDCG------NIVAVRIVRDQITGIGKGFGYV 332
Query: 388 LFKTR 392
LF+ +
Sbjct: 333 LFENK 337
>gi|410078654|ref|XP_003956908.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
gi|372463493|emb|CCF57773.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
Length = 443
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 44/257 (17%)
Query: 161 NKKTKKRKRDDVEKDYVEKKY-GVIAKEEEGKKVGVGEKRKKADNET---EDMLVHRKEE 216
+KK K+K + E D++E+KY + KE+ K + K ++ +T ++ + +
Sbjct: 77 SKKRHKKKSTNDESDHLEEKYFAKLLKEDSEDKEETADLNKSSNEKTVKSQETKAKKIDL 136
Query: 217 GFDDEGKLLRTIFVGNLPLK-VKKKTLIKEFIK--------------------FGEIDSV 255
DD K RT+FVGNL + + K++ KEF F I+S+
Sbjct: 137 REDDLEKAERTLFVGNLTSEAIISKSIYKEFKNLFATIPKISEDDVETTNDEDFLVIESI 196
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIR 314
R RS+ D +PRK A ++++++++ SV+AYIV+K+++S + + A N V H++
Sbjct: 197 RFRSISF-DEALPRKVAFVRQKLHKSRQSVNAYIVYKNKKSIKPIISALNGKVFHNRHLK 255
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D P AP +D K+++FVGNL F+ +E ++ F CG +E VR+
Sbjct: 256 VDSVTHP--------AP-HDKKRSIFVGNLDFEEDEESLWNHFSKCG------EIEYVRI 300
Query: 373 IRHPHMRVGKGIAYVLF 389
IR +GKG AYV F
Sbjct: 301 IRDSKTNLGKGFAYVQF 317
>gi|300176269|emb|CBK23580.2| unnamed protein product [Blastocystis hominis]
Length = 276
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 101/185 (54%), Gaps = 26/185 (14%)
Query: 227 TIFVGNLPLKVKKKTLI-KEFIKFGEIDSVRIRSVPI-------IDTKIPRKGAILQKQI 278
TIFV ++ V+K + + K F KFG I S+R RS+ + D K+ +K ++++ ++
Sbjct: 72 TIFVASV---VQKPSQVHKVFSKFGSIRSLRFRSISVESTPISHFDKKLLKKASVIKNKL 128
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+E+ V+AYIV++ ++S EAAL N ++ HI +DR +K E +T
Sbjct: 129 SEDKKCVNAYIVYEQKESVEAALVLNNTLLFDRHIVVDRVSKKKKPFDKERN-----HRT 183
Query: 339 VFVGNLPFDVKDEEIYQLF-CGL---------NDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+F+GNLPFD +EE+ F G+ E VE+VR+IR ++ GKG YV
Sbjct: 184 LFIGNLPFDADEEELRSFFESGMLKQKTHLEEGSHEEFVESVRLIRSKDLQKGKGFGYVT 243
Query: 389 FKTRV 393
K+ V
Sbjct: 244 LKSAV 248
>gi|440803738|gb|ELR24621.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 411
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 21/182 (11%)
Query: 218 FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIP---RKGAIL 274
D E K TIFVGN+P+ V KK L + F +G+I S+R RSV K +K A L
Sbjct: 133 MDAEKKKECTIFVGNVPVTVTKKELRRIFAPYGKIQSIRFRSVAFAFPKRKNGDKKAAFL 192
Query: 275 QKQINENADSVHAYIVFKSEQSTEAALAFNMAVI----GGNHIRLDRACPPRKKLKGEDA 330
K + + D+ + Y+VF + S ALA N I G H+ +D A A
Sbjct: 193 GKHFHPDRDTCNVYVVFAEKDSALKALAANNTKIELSDGVAHLSVDLAY----------A 242
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P +++ + FVGNLPF ++DEE+ F + +V+ VR++R +GKG +V F+
Sbjct: 243 PTWNMARAAFVGNLPFSIRDEELRSHF----ESAGTVKRVRIVRDSATFMGKGFGFVEFE 298
Query: 391 TR 392
+
Sbjct: 299 NK 300
>gi|391336574|ref|XP_003742654.1| PREDICTED: nucleolar protein 12-like [Metaseiulus occidentalis]
Length = 411
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD + +TIFV NLP K ++K + + F K G+I VR + IP + AI ++ +
Sbjct: 151 DDPAFIPQTIFVKNLPPKSQRKHVKRLFEKCGDILFVRFANAIPAKAGIPVEAAIKKRSL 210
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+ ++ A++VFK S + A+ N G+H+R+DR +A K++
Sbjct: 211 IKEGTTISAFVVFKDASSVQTAIDLNGIEYEGHHLRVDR----------REASNIPQKRS 260
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VF GN+PFD D+ ++ F + +++ VRV+R +GKGIA+V+FK
Sbjct: 261 VFCGNIPFDTTDDALWDFF----EEAGAIDYVRVVRDNETGIGKGIAFVVFK 308
>gi|296412075|ref|XP_002835753.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629543|emb|CAZ79910.1| unnamed protein product [Tuber melanosporum]
Length = 453
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 28/166 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+F+GN+P +I S+R RSV + +IPRK A + +++E +V
Sbjct: 184 RTVFLGNVPSAAISSKII----------SIRFRSVAFSE-QIPRKAAFVTHKLHEKQQTV 232
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+V+ + AL N V+ HIR+D P + D K+ VF+GNL
Sbjct: 233 NAYVVYSTPVEAREALKLNGKVVLDRHIRVDSVAHPSPQ---------DPKRCVFIGNLD 283
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+ ++E +++ F CG VE+VRV+R VGKG AYV F
Sbjct: 284 FEAQEENLWRHFGTCG------KVESVRVVRDAKTNVGKGFAYVQF 323
>gi|17539754|ref|NP_502291.1| Protein F11A10.7 [Caenorhabditis elegans]
gi|15718191|emb|CAC70081.1| Protein F11A10.7 [Caenorhabditis elegans]
Length = 394
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 11/164 (6%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGN+PL + +K++ + F FG I SVR+R++ + K+ ++ L ++N+ S+
Sbjct: 144 TVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHLTGKLNDKQSSLT 203
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F +E+S E AL +N + + IR+D+ +K+ G+D +FVGNLPF
Sbjct: 204 FYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEF-GKDM-------AIFVGNLPF 255
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
++ ++ + F VEAVR++R GKG A+V FK
Sbjct: 256 EITEDALITFFSAQI---GPVEAVRIVRDKDTGKGKGFAFVNFK 296
>gi|268536642|ref|XP_002633456.1| Hypothetical protein CBG06224 [Caenorhabditis briggsae]
Length = 393
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 94/165 (56%), Gaps = 12/165 (7%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVGN+PL + +K++ + F FG++ SVR+R + + K+ R+ L ++++ S+
Sbjct: 144 KTVFVGNMPLTMNEKSVSRIFSDFGKVSSVRMRCLIPTNEKLTRRVTHLSGKLSDKQTSL 203
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F+ E+S E AL +N + + IR+D KK G+D +FVGNLP
Sbjct: 204 TFYVKFEEEESVEKALKYNGTKLEDHLIRVDTVGT--KKGFGKDMA-------IFVGNLP 254
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
FD+ ++ + F + ++EAVR+IR GKG A+V FK
Sbjct: 255 FDITEDTLSNFFT---EKVGAIEAVRIIRDKDSGKGKGFAFVNFK 296
>gi|365758459|gb|EHN00299.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 460
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 50/256 (19%)
Query: 169 RDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF--DDEGKLLR 226
RDD ++ Y + KE G E +KAD + K+ F D+ K R
Sbjct: 90 RDDENENLEAHYYAKLLKEGPEGDDGKSEATRKADGPSSSTTSAAKKVDFKEDELEKAER 149
Query: 227 TIFVGN-LPLKVKKKTLIKEFIK-FG---------------------------EIDSVRI 257
T+F+GN L + K + KEF K FG I+S+R
Sbjct: 150 TVFIGNILSTVITSKKVYKEFKKLFGTNPVTKTEESDNDEEKEDAKKDNSNAFAIESIRF 209
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
RS+ D +PRK A +Q++ +++ D+V+AY+V+K+ + + N V +H+R+D
Sbjct: 210 RSISF-DEALPRKVAFVQQKFHKSRDTVNAYVVYKNRSAVRQICSNLNATVFQNHHLRVD 268
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIR 374
P AP +D K+++FVGNL F+ +E +++ F CG +E VR++R
Sbjct: 269 AVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFESCG------GIEYVRIVR 313
Query: 375 HPHMRVGKGIAYVLFK 390
+GKG AYV FK
Sbjct: 314 DSKTNMGKGFAYVQFK 329
>gi|401840528|gb|EJT43313.1| NOP12-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 460
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 50/256 (19%)
Query: 169 RDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF--DDEGKLLR 226
RDD ++ Y + KE G E +KAD + K+ F D+ K R
Sbjct: 90 RDDENENLEAHYYAKLLKEGPEGDDGKSEATRKADGPSSSTTSAAKKVDFKEDELEKAER 149
Query: 227 TIFVGN-LPLKVKKKTLIKEFIK-FG---------------------------EIDSVRI 257
T+F+GN L + K + KEF K FG I+S+R
Sbjct: 150 TVFIGNILSTVITSKKVYKEFKKLFGTNPVTKTEESDNDEEKEDAKKDNSNAFAIESIRF 209
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
RS+ D +PRK A +Q++ +++ D+V+AY+V+K+ + + N V +H+R+D
Sbjct: 210 RSISF-DEALPRKVAFVQQKFHKSRDTVNAYVVYKNRSAVRQICSNLNATVFQNHHLRVD 268
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIR 374
P AP +D K+++FVGNL F+ +E +++ F CG +E VR++R
Sbjct: 269 AVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFESCG------GIEYVRIVR 313
Query: 375 HPHMRVGKGIAYVLFK 390
+GKG AYV FK
Sbjct: 314 DSKTNMGKGFAYVQFK 329
>gi|341893358|gb|EGT49293.1| hypothetical protein CAEBREN_16941 [Caenorhabditis brenneri]
Length = 401
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 95/165 (57%), Gaps = 11/165 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVGN+PL + +K++ + F FG + SVR+R++ I+ K+ ++ L ++N+ S+
Sbjct: 150 KTVFVGNMPLTMNEKSVRRIFSDFGTVSSVRMRNLIPINEKLSKRVTHLSGKLNDKQSSL 209
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F++E+S E AL +N + + +R+D+ +K G+D +FVGNLP
Sbjct: 210 TFYVKFENEESVENALKYNGTKLEDHVVRVDKVGNKKKDF-GKDLA-------IFVGNLP 261
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
F++ ++ + F + VE VR++R GKG A+V FK
Sbjct: 262 FEITEDALITFFS---EQIGPVEGVRIVRDKDTGKGKGFAFVNFK 303
>gi|426255548|ref|XP_004021410.1| PREDICTED: RNA-binding protein 34 [Ovis aries]
Length = 427
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 22/193 (11%)
Query: 203 DNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS 259
D+ E ++ RK+ + E + L RT+FVGNLP+ KKK L F ++G+I+SVR RS
Sbjct: 158 DDVEETVVNQRKKIQINQEAERLKNERTVFVGNLPVTCKKKKLKSFFKEYGQIESVRFRS 217
Query: 260 VPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRA 318
+ + + +K A ++++I+ + +++AY+VFK E + AL N A G +R+D A
Sbjct: 218 LIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKDENAATKALERNGAQFAEGFRVRVDLA 277
Query: 319 CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHP 376
+ K++VFVGNLP+ V++ + + F CG +V AVR++R
Sbjct: 278 TETSSR----------DKRSVFVGNLPYKVEESAVEKHFLACG------NVVAVRIVRDQ 321
Query: 377 HMRVGKGIAYVLF 389
VG+G YVLF
Sbjct: 322 VTGVGRGFGYVLF 334
>gi|341884119|gb|EGT40054.1| hypothetical protein CAEBREN_26109 [Caenorhabditis brenneri]
Length = 401
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 95/165 (57%), Gaps = 11/165 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVGN+PL + +K++ + F FG + SVR+R++ I+ K+ ++ L ++N+ S+
Sbjct: 150 KTVFVGNMPLTMNEKSVRRIFSDFGTVSSVRMRNLIPINEKLSKRVTHLSGKLNDKQSSL 209
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F++E+S E AL +N + + +R+D+ +K G+D +FVGNLP
Sbjct: 210 TFYVKFENEESVEKALKYNGTKLEDHVVRVDKVGNKKKDF-GKDLA-------IFVGNLP 261
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
F+ ++ + F ++ VE VR++R GKG A+V FK
Sbjct: 262 FETTEDALITFF---SEQIGPVEGVRIVRDKDTGKGKGFAFVNFK 303
>gi|320580392|gb|EFW94615.1| hypothetical protein HPODL_4115 [Ogataea parapolymorpha DL-1]
Length = 345
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 40/251 (15%)
Query: 158 RSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEG 217
R +NK+ RKR VE + EEE + + G++ K D RKEE
Sbjct: 14 RIDNKELVARKRTLVE---------LPKTEEEERALEAGQQPNKRTKRAADFAKSRKEES 64
Query: 218 --------FD---DEGKLLRTIFVGNLPLKV---KKKT--LIKEFIKFGEIDSVRIRSVP 261
+D ++ K RTIF+GNLP + KK T L F FG+I+S+R RS
Sbjct: 65 SATTSAPKYDPVAEKEKNKRTIFIGNLPTAIMASKKSTKELKALFKPFGKIESMRFRSF- 123
Query: 262 IIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
+ + +PRK A + + ++ D+ + Y+VF+ E+ + A+ N V +H+R+D P
Sbjct: 124 AVQSNLPRKAAYILHNVKDD-DTTNCYMVFEKEEDSLKAVELNGTVFMDHHLRVDHVAQP 182
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHPHM 378
K +D K +VFVGNL F+ +E +++ F C D + + VR++R
Sbjct: 183 LK---------HDNKLSVFVGNLDFEETEESLWRFFNETCS-PDKSNVIANVRLVRDSKT 232
Query: 379 RVGKGIAYVLF 389
GKG A V F
Sbjct: 233 NYGKGFAIVQF 243
>gi|367017858|ref|XP_003683427.1| hypothetical protein TDEL_0H03570 [Torulaspora delbrueckii]
gi|359751091|emb|CCE94216.1| hypothetical protein TDEL_0H03570 [Torulaspora delbrueckii]
Length = 419
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 28/184 (15%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPR 269
D+ K RT+FVGNL +V K + KEF + I+S+R RS+ D +PR
Sbjct: 130 DELKKAERTVFVGNLSSEVITSKKVAKEFKRLFSGLEDEASVIESIRFRSISF-DEALPR 188
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGE 328
K A +Q++++++ +SV+AY+V+K + + + A A N V H+R+D P
Sbjct: 189 KVAFVQQKLHKSRESVNAYVVYKDKGAVKKACAKLNGHVFLQRHLRVDSVTHP------- 241
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
+++ K+++FVGNL F+ DE ++ F CG +E VR++R +GKG AY
Sbjct: 242 --AVHENKRSIFVGNLDFEEDDESLWLHFKDCG------EIEYVRLVRDAKTNMGKGFAY 293
Query: 387 VLFK 390
+ FK
Sbjct: 294 IQFK 297
>gi|321463774|gb|EFX74787.1| hypothetical protein DAPPUDRAFT_306960 [Daphnia pulex]
Length = 432
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R + V NLP+K+K++T+ F K G+I++V +R + D +P+K A+++++ + N S+
Sbjct: 146 RVVLVKNLPIKIKRRTVHHFFAKCGKINAVWLRCAALADPAMPKKVAVIKQEFHPNRQSI 205
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A++ F++ ++ +AA+A NHI + L + + +FVGNL
Sbjct: 206 SAFVRFETNEAAQAAVAMTGCEFQENHIAVS--------LLSDSNIKKQLSLGIFVGNLT 257
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
FDV DE ++ F CG + VR+IR +GKG YV F++
Sbjct: 258 FDVTDEALWLHFGECG------KISDVRIIRDRVNGMGKGFGYVNFES 299
>gi|50287177|ref|XP_446018.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691041|sp|Q6FUS6.1|NOP12_CANGA RecName: Full=Nucleolar protein 12
gi|49525325|emb|CAG58942.1| unnamed protein product [Candida glabrata]
Length = 396
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 33/188 (17%)
Query: 219 DDEGKLLRTIFVGNLPLKVK-KKTLIKEFIK-FGEID-----------SVRIRSVPIIDT 265
D+ K RTIFVGNL +V K+ K F K F ID S+R RSV D
Sbjct: 105 DEIEKASRTIFVGNLSNEVIISKSTYKLFQKLFNNIDDDDENKKLPIQSIRFRSVSFEDA 164
Query: 266 KIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA--FNMAVIGGNHIRLDRACPPRK 323
+PRK A +Q++++++ SV+AYIV+K + L N V H+R+D P
Sbjct: 165 -LPRKVAFVQQKLHKSRASVNAYIVYKEQSPLLNKLIKRLNGQVFSNRHLRVDSITHP-- 221
Query: 324 KLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVG 381
AP +D +++VFVGNL F+ +E +++ F CG S+E VR++R P +G
Sbjct: 222 ------AP-HDKQRSVFVGNLDFEEDEESLWKHFGACG------SIEYVRIVRDPKTNMG 268
Query: 382 KGIAYVLF 389
KG AYV F
Sbjct: 269 KGFAYVQF 276
>gi|344228239|gb|EGV60125.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 430
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
+T+FVGN+P+ V K F G + S+R RS+ D +PRK A QK +
Sbjct: 138 KTVFVGNVPISVVTSKPTYKRFKHLFANVGPVQSIRFRSISF-DQALPRKIAFAQKSFHA 196
Query: 281 NADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
N ++++Y+VF++ E S +A N V H+++D P K D K+TV
Sbjct: 197 NRQNINSYVVFETKEASLKAVDLLNATVFDQFHLKVDHVTHPTAK---------DNKRTV 247
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
FVGNL FD ++E +++ F + VE+VR++R +GKG A V F
Sbjct: 248 FVGNLDFDEQEETLWKYFNA--HTANDVESVRIVRDAKTNLGKGFALVQF 295
>gi|428181217|gb|EKX50082.1| hypothetical protein GUITHDRAFT_104476 [Guillardia theta CCMP2712]
Length = 358
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 86/136 (63%), Gaps = 10/136 (7%)
Query: 213 RKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
R+ +G ++E L RT+FVG +PL +K++ K F +FG I+SVR+RS+PI + K+P+K +
Sbjct: 104 RESDGNEEEA-LERTLFVGGVPLASTRKSIKKFFQEFGFIESVRMRSIPISNPKLPKKTS 162
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
I +N ++ +AY+ FK + S AL+ N +++ G+ I++D A +
Sbjct: 163 IALGMVNSERETCNAYVRFKEKGSVAKALSKNGSLMEGHRIKVDHANISKN--------- 213
Query: 333 YDIKKTVFVGNLPFDV 348
Y+++ +VFVGNLPF+
Sbjct: 214 YNVRLSVFVGNLPFNA 229
>gi|156839965|ref|XP_001643668.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156114288|gb|EDO15810.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 467
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 28/184 (15%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIK-FGEID-------SVRIRSVPIIDTKIPR 269
D+ K RT+F+GN+P V + + K+F K F ID ++R RS+ D +PR
Sbjct: 177 DELEKAKRTVFIGNVPNTVITSRNIYKQFKKLFSLIDEKKFSIETIRFRSISF-DEALPR 235
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
K A +Q++++++ +S++AYIV+K + S N V NH+R+D P
Sbjct: 236 KVAFVQQKLHKSRNSINAYIVYKEKSSVNPICTKLNGTVFQKNHLRVDSVSNP------- 288
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
++ K+++FVGN+ F+ +E ++ F CG +E VR+IR +GKG AY
Sbjct: 289 --AAHENKRSIFVGNMDFEQDEETLWSHFESCG------EIEYVRIIRDSKTNLGKGFAY 340
Query: 387 VLFK 390
+ FK
Sbjct: 341 IQFK 344
>gi|401623704|gb|EJS41793.1| nop12p [Saccharomyces arboricola H-6]
Length = 470
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 60/275 (21%)
Query: 160 ENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF- 218
E KK KK KRDD +D + Y + E+ +K + K D + K+ F
Sbjct: 81 EPKKAKKVKRDDENEDLEARYYAKLLNEDSKEKDEKTTAKTKNDESVAPVTSAAKKVDFK 140
Query: 219 -DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FG------------------------- 250
D+ K RT+F+GN L + K + K+F K FG
Sbjct: 141 EDELEKAERTVFIGNILSTVITSKKIYKDFKKLFGTSPVTKAEESENENENENENENENE 200
Query: 251 ------------EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQST- 297
I+S+R RS+ D +PRK A +Q++ +++ D+V+AYIV+K++ +
Sbjct: 201 REVAKKDNSNPFAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTVNAYIVYKNKSAVR 259
Query: 298 EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF 357
+ N + +H+R+D P AP +D K+++FVGNL F+ +E +++ F
Sbjct: 260 QICSTLNSTLFQDHHLRVDAVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHF 310
Query: 358 --CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
CG +E VR+IR +GKG AYV FK
Sbjct: 311 ESCG------DIEYVRIIRDSKTNMGKGFAYVQFK 339
>gi|258575621|ref|XP_002541992.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902258|gb|EEP76659.1| predicted protein [Uncinocarpus reesii 1704]
Length = 565
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 131/300 (43%), Gaps = 85/300 (28%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEE--GKKVGVGE--KRKKA------DNETEDML-- 210
K++KRKR + E+ + + KEEE KK G+ KR+KA D E ED
Sbjct: 139 KSRKRKRGEREEALEDSYMRKLVKEEEKDSKKRAAGKETKRQKATSDATNDPEDEDSASG 198
Query: 211 ------------------VHRKEEG-FDDEG--KLLRTIFVGNLPL-----KVKKKTLIK 244
VH G D EG K RT+F+GN+ K KKTL+
Sbjct: 199 EETDEGDGIDGPDSNPPPVHESLSGSLDPEGLQKSARTVFLGNVSTEAIKSKAAKKTLLA 258
Query: 245 EFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKS 293
F +I+S+R RS +P++ A +K++ + S +AY+V+ +
Sbjct: 259 HLSAFFPSLPESSTPHKIESIRFRSTAFATAAVPKRAAFAKKELMDSTTQSTNAYVVYTT 318
Query: 294 EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL--------- 344
+ A++ N ++ H+R+D P AP+ D K+ VFVGNL
Sbjct: 319 AAAARKAISLNGTIVLERHLRVDSIAHP--------API-DNKRCVFVGNLGFVDEETAL 369
Query: 345 --------------PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P DV +E +++ F N VE+VRV+R P RVGKG AYV F+
Sbjct: 370 ADGDAEKKRKKYTPPADV-EEGLWRTF---NQHAGPVESVRVVRDPSTRVGKGFAYVQFR 425
>gi|363749889|ref|XP_003645162.1| hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888795|gb|AET38345.1| Hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
Length = 430
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 83/142 (58%), Gaps = 19/142 (13%)
Query: 251 EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIG 309
+++S+R RS+ + +PRK A +Q++++++ DSV+AY+V+K S A N V
Sbjct: 186 KVESIRFRSIAF-EEPLPRKVAFVQQKLHKSRDSVNAYVVYKERSSIPVVCKALNGVVFH 244
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSV 367
G+H+R D P AP +D K++VFVGNL F+ +E +++ F CG +
Sbjct: 245 GHHLRFDSVAHP--------AP-HDKKRSVFVGNLDFEEIEENLWKHFESCG------DI 289
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
E VR+IR P VGKG AYV F
Sbjct: 290 EYVRIIRDPKSNVGKGFAYVQF 311
>gi|219119333|ref|XP_002180429.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407902|gb|EEC47837.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 393
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 21/178 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK--------- 276
RT+FVGNLP + +K+L K F G+++S RIRS+ + K+P++ A QK
Sbjct: 92 RTVFVGNLPTQYNRKSLAKLFKDCGKVESSRIRSLAVTGVKLPQENAGNQKLVKKVCANT 151
Query: 277 -QINENA-DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
Q++ A SV Y+VF ++ + E AL N ++ +R R+ YD
Sbjct: 152 SQVDTKAKSSVQGYVVFVNKDAIEKALVLN-----NTEVKDERTGTTRRIRVDHANAEYD 206
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++FVGNLP+ ++ + + F CGLN ++ VR++R KG YVLF
Sbjct: 207 AARSIFVGNLPYTADEDSLAEHFCEGCGLN--VDDIQGVRIVRDKETFQCKGFGYVLF 262
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 96/168 (57%), Gaps = 15/168 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIF+ N+P + K TL K F ++G ID++R R++ + KI +K A +++ I+ +V
Sbjct: 267 KTIFIDNIPKETKITTLKKVFGQYGPIDNLRFRNIVPKNPKISKKVAAIKQDIHPKIVTV 326
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AYI +KSE+S + AL+ N GN++ + KL E ++IKK++F+GNL
Sbjct: 327 VAYIKYKSEESAKKALSMNGKKFEGNYVNVKIVA----KLGQEK---HNIKKSIFIGNLK 379
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
F + +I++ F CG +E+VR+IR +G YV FK+
Sbjct: 380 FGMNTNDIWENFSKCG------EIESVRLIRDKKTGQTRGFGYVNFKS 421
>gi|255713116|ref|XP_002552840.1| KLTH0D02640p [Lachancea thermotolerans]
gi|238934220|emb|CAR22402.1| KLTH0D02640p [Lachancea thermotolerans CBS 6340]
Length = 462
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 132/262 (50%), Gaps = 49/262 (18%)
Query: 163 KTKKRKRDDVEKDYVEKKY--GVIAKEE-EGKKVGVGEKRKKADNETEDML------VHR 213
K +KRK D + + +E +Y ++ KE+ E ++ E K D E E + R
Sbjct: 100 KRQKRKALDADNENLESEYYSKLLEKEQGEAEETSAAEPESK-DGEAEASVQATAASASR 158
Query: 214 KEEGFDDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKF---------GE------------ 251
K+ ++ K RT+FVGN+P+ V K L K+F K G+
Sbjct: 159 KDLKEEELQKAERTVFVGNVPVDVVTSKPLKKQFKKLFAVAKKHSGGDDSDEDKATGPDT 218
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVI 308
++S+R RS+ + +PRK A +Q++++++ DS +AY+V+ + + +AA N V
Sbjct: 219 FAVESIRFRSISF-EEALPRKVAFVQQKLHKSRDSANAYVVYAEKAAVKAACQTLNGTVF 277
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVE 368
+H+R+D P + +D K++VFVGNL F+ +E +++ F + +E
Sbjct: 278 YDHHLRVDSVAHPAQ---------HDNKRSVFVGNLDFEEAEENLWKHF----EKSGEIE 324
Query: 369 AVRVIRHPHMRVGKGIAYVLFK 390
VRV+R +GKG AYV F+
Sbjct: 325 YVRVVRDSKTNMGKGFAYVQFR 346
>gi|323303035|gb|EGA56838.1| Nop12p [Saccharomyces cerevisiae FostersB]
Length = 459
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 48/204 (23%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FG-------------------------- 250
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFK 328
>gi|449278094|gb|EMC86061.1| RNA-binding protein 34, partial [Columba livia]
Length = 184
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 18/167 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ + L F ++G+I S+R RS+ + + +K A ++ +++ N V
Sbjct: 1 RTVFVGNLPVNCTAQELKSLFKEYGQIKSIRFRSLVPAEETLSKKLAAIKHKVHPNVKFV 60
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E AL N I G HIR+D A +D K++VF+GNL
Sbjct: 61 NAYVVFKEECDAIKALNENGTEIARGFHIRVDIA---------SKTSSHDNKRSVFLGNL 111
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+D+ ++ + + F CG V AVR++R +GKG YVLF
Sbjct: 112 SYDISNDAVREHFAVCG------EVVAVRIVRDRKTGLGKGFGYVLF 152
>gi|6324532|ref|NP_014601.1| Nop12p [Saccharomyces cerevisiae S288c]
gi|74676462|sp|Q08208.1|NOP12_YEAST RecName: Full=Nucleolar protein 12
gi|1419839|emb|CAA99043.1| unnamed protein product [Saccharomyces cerevisiae]
gi|207341353|gb|EDZ69435.1| YOL041Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273915|gb|EEU08834.1| Nop12p [Saccharomyces cerevisiae JAY291]
gi|259149444|emb|CAY86248.1| Nop12p [Saccharomyces cerevisiae EC1118]
gi|285814848|tpg|DAA10741.1| TPA: Nop12p [Saccharomyces cerevisiae S288c]
gi|323346597|gb|EGA80883.1| Nop12p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581127|dbj|GAA26285.1| K7_Nop12p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763209|gb|EHN04739.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 459
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 48/204 (23%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FG-------------------------- 250
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFK 328
>gi|151945592|gb|EDN63833.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
Length = 459
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 48/204 (23%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FG-------------------------- 250
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 IAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFK 328
>gi|190407303|gb|EDV10570.1| nucleolar protein 12 [Saccharomyces cerevisiae RM11-1a]
Length = 459
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 48/204 (23%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FG-------------------------- 250
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFK 328
>gi|449018258|dbj|BAM81660.1| similar to nucleolar RNA-binding protein [Cyanidioschyzon merolae
strain 10D]
Length = 406
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 37/197 (18%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
L RT+FVGN+P ++++ L F G+I S R+RS +PRK A+ Q I+
Sbjct: 42 LRRTVFVGNVPATIRRRKLEALFRSCGKIVSSRLRSFTPAKPNLPRKAAMNQGAIHPTRR 101
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGN-----HIRLDRACPPRKKLKGE---------- 328
+ +A++VF+ + + E AL N + + H+R+DR +K++ +
Sbjct: 102 TCNAFLVFEDDVAVERALLLNGTPLETDDGSQVHMRVDRCYLAPQKMREQRTTRADTGTG 161
Query: 329 --DAPLY------------DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
AP Y D + ++F+GN+PF +EEI +F CG ++ VR+
Sbjct: 162 DAAAPSYTSPDALSAKIAWDHRHSIFIGNVPFTANEEEIRSVFSDCG------AILNVRI 215
Query: 373 IRHPHMRVGKGIAYVLF 389
+R +GKG AYV F
Sbjct: 216 VRDAQTGMGKGFAYVTF 232
>gi|340383699|ref|XP_003390354.1| PREDICTED: RNA-binding protein 34-like [Amphimedon queenslandica]
Length = 305
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 22/166 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI-LQKQINENADSVH 286
+F+GN+PL KKK ++K FG ++S+R RSV + K+P + A L KQ+ + +
Sbjct: 61 VFIGNVPLSTKKKDILKLVSPFGPVESLRQRSVVVSPGKLPVEVARKLGKQL--TGTTTN 118
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+V ++E+S A L N + G HIR+D A P D +VFVGN+PF
Sbjct: 119 FYVVMETEESASACLELNGREVDGRHIRVDLATPTN-----------DTHCSVFVGNVPF 167
Query: 347 DVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+E++ ++F CG ++ +R+I+ + KG AYV FK
Sbjct: 168 GTDEEKLRKVFESCG------PIDGIRIIKDTRTGINKGFAYVKFK 207
>gi|365982827|ref|XP_003668247.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
gi|343767013|emb|CCD23004.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 51/204 (25%)
Query: 222 GKLLRTIFVGNLPLKV-KKKTLIKEFIKFGE----------------------------- 251
K RT+F+GN+P V KT+ K F K
Sbjct: 161 AKAERTVFIGNIPNDVITSKTVYKTFKKLFNTNPKPKKSEDEDDDEEKQEDIESKIKENP 220
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++++++ DSV+AYIV+K++ + + N V
Sbjct: 221 FTIESIRFRSISF-DEALPRKVAFVQQKLHKSRDSVNAYIVYKNKNIVKTICSELNGTVF 279
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P + D K+++FVGNL F+ +E ++ F CG
Sbjct: 280 HNHHLRVDSVAHPSAQ---------DKKRSIFVGNLDFEEAEESLWNHFKSCG------E 324
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 325 IEYVRIIRDAKTNMGKGFAYVQFK 348
>gi|323335669|gb|EGA76952.1| Nop12p [Saccharomyces cerevisiae Vin13]
Length = 358
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 48/204 (23%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FG-------------------------- 250
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFK 328
>gi|323352349|gb|EGA84884.1| Nop12p [Saccharomyces cerevisiae VL3]
Length = 346
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 48/204 (23%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FG-------------------------- 250
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 129 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 188
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 189 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 247
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 248 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 292
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 293 IEYVRIIRDSKTNMGKGFAYVQFK 316
>gi|254567033|ref|XP_002490627.1| Nucleolar protein, required for pre-25S rRNA processing
[Komagataella pastoris GS115]
gi|238030423|emb|CAY68347.1| Nucleolar protein, required for pre-25S rRNA processing
[Komagataella pastoris GS115]
gi|328351015|emb|CCA37415.1| Nucleolar protein 12 [Komagataella pastoris CBS 7435]
Length = 445
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGNLP+ V +K+ + K G ++S+R RS+ +PR+ A L K +E
Sbjct: 155 RTVFVGNLPVIVAIEREEKEEFKEYMAKIGPVESIRFRSIAF-KLPMPRRDAFLSKAFDE 213
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+++AY+V++++ ++ A N V +H+R+D P +P D KK++F
Sbjct: 214 TRSALNAYVVYENKNDSKKAKELNGKVFKDHHLRVDHVAHP--------SP-QDNKKSIF 264
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+GNL F+ ++E +++ F + VE VR+IR GKG A V FK
Sbjct: 265 IGNLDFEEEEESLWKYFTEKVG-QDKVENVRIIRDTKTNFGKGFAMVQFK 313
>gi|345326998|ref|XP_001512144.2| PREDICTED: RNA-binding protein 34-like [Ornithorhynchus anatinus]
Length = 416
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 19/167 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G I+SVR RSV + +K A ++++ + ++
Sbjct: 173 RTVFVGNLPVTCNKKKLKSIFKEYGPIESVRFRSVIPAEGISTKKLAAIKRKFHPEQKNI 232
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E S AL N I G IR+D A + D K++VFVGNL
Sbjct: 233 NAYVVFKKESSAAKALKRNGTQISDGFRIRVDLAS----ETSSRD------KRSVFVGNL 282
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ +++ + + F CG V AVR++R GKG YVLF
Sbjct: 283 AYKIEEASVQEHFSDCG------QVVAVRIVRDGVTGAGKGFGYVLF 323
>gi|407929215|gb|EKG22050.1| Nucleotide-binding alpha-beta plait [Macrophomina phaseolina MS6]
Length = 436
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 129/293 (44%), Gaps = 77/293 (26%)
Query: 158 RSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKA--------------- 202
+S+ K+ +K DD+E Y+ K AKEE ++ KR+K
Sbjct: 28 KSQRKRKRKGDEDDLEDVYMRKLAREEAKEEARRQAERSTKRQKKEDGEAAEDSEEALSD 87
Query: 203 -----DNETEDMLVHRKEEGFDDEG-----KLLRTIFVGNLPLKV-----KKKTLIKEFI 247
D E+E + + + + +G K RT+FVGN+ +K KKTL+K
Sbjct: 88 DDGDLDTESESEVPQHEIKASEQKGDPELEKASRTVFVGNVSVKAVSDKSAKKTLVKHMS 147
Query: 248 KF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQS 296
F + +S+R RS P T +P+K A +K+I E S +AY+V+ ++Q+
Sbjct: 148 SFLPELPEHKPPHKFESIRFRSTPF-STYVPKKAAFAKKEILEETTHSTNAYVVYSTQQA 206
Query: 297 T-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ 355
EAA N ++ HIR+D P K D ++ VFVGNL F V DE + Q
Sbjct: 207 AREAARRLNGTIVLERHIRVDEVAHPAK---------TDHRRCVFVGNLGF-VDDESMIQ 256
Query: 356 -----------------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIA 385
L+ + +VE+VRV+R P RVGKG A
Sbjct: 257 EAESKRIGKEIRKRKEPGDVEEGLWRTFGKV-GTVESVRVVRDPKTRVGKGFA 308
>gi|444314259|ref|XP_004177787.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
gi|387510826|emb|CCH58268.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
Length = 473
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 44/202 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKFG--------------------------- 250
D+ K RTIF+GNLP V K + KEF K
Sbjct: 161 DELEKAERTIFIGNLPNSVITSKDIYKEFKKLFMRNPNPEDKQDNKKKNAKEEEKEKENP 220
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQST-EAALAFNMAVI 308
I+S+R RS+ D +PRK A +Q++ ++ DSV+AYIV+K ++ + A N
Sbjct: 221 FAIESIRFRSISF-DEALPRKVAFVQQKFHKLRDSVNAYIVYKRRKAVKQIAKHLNGMEF 279
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVE 368
H+R+D P +++ K+++FVGNL F+ +E +++ F D +E
Sbjct: 280 HDRHLRVDSVAHP---------SVHENKRSIFVGNLDFEEDEENLWKHFLSCGD----IE 326
Query: 369 AVRVIRHPHMRVGKGIAYVLFK 390
VR++R +GKG AYV FK
Sbjct: 327 YVRIVRDSKTNLGKGFAYVQFK 348
>gi|392296290|gb|EIW07392.1| Nop12p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 459
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 48/204 (23%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FG-------------------------- 250
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++ YIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINTYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFK 328
>gi|401407368|ref|XP_003883133.1| hypothetical protein NCLIV_028890 [Neospora caninum Liverpool]
gi|325117549|emb|CBZ53101.1| hypothetical protein NCLIV_028890 [Neospora caninum Liverpool]
Length = 687
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 207 EDMLVHRKEEGF--DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFG--EIDSVRIRSVPI 262
ED E G+ D+ K RT+FVGNLPL K + + + G +++S+R+RS+P+
Sbjct: 429 EDSGAGEAEAGWRETDKEKERRTVFVGNLPLSGWKPPALYKHLGIGRKDVESIRLRSIPV 488
Query: 263 IDT-KIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
R G I+Q Q + D +AYIV K + A L + + +R+D A
Sbjct: 489 HPKFNKCRLGGIVQGQFTDLKDFQNAYIVLKDRKLVRAVLQHDGSTFQDRRLRVDEAGE- 547
Query: 322 RKKLKGEDA-PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV 380
+G++ +D KKTVFVGNLP +E++ + + +V+AVR+IR
Sbjct: 548 ----RGQNVFSRFDRKKTVFVGNLPARCSEEDLRKAL----ECNGAVKAVRIIRDKVTTE 599
Query: 381 GKGIAYVLFKTRV 393
KG +V F+ RV
Sbjct: 600 SKGFGFVCFEDRV 612
>gi|119195671|ref|XP_001248439.1| hypothetical protein CIMG_02210 [Coccidioides immitis RS]
gi|392862354|gb|EAS37006.2| nucleolar protein 12 [Coccidioides immitis RS]
Length = 556
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 123/296 (41%), Gaps = 78/296 (26%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEG----KKVGVGEKRKKADN----ETEDMLVHRK 214
K++KRKR + E D E IAKEEE + EKR++ D ++E
Sbjct: 130 KSQKRKRHEAEDDLEESYMRKIAKEEEKDRKKRAAAKNEKRQRTDESPAVDSEAGSSGPD 189
Query: 215 EEGFDDEG--------------------------KLLRTIFVGNLPL-----KVKKKTLI 243
E+ D+E K RT+F+GN+ K KK L+
Sbjct: 190 EQKDDEESESDQEDKGPPPVHESLANTAEAAALEKSNRTVFLGNVSSEAIKSKSSKKALL 249
Query: 244 KEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFK 292
F +I+S+R RS +P++ A +K + + S +AY+V+
Sbjct: 250 AHLSSFFPSLPESSTPHKIESIRFRSTAFATAAVPKRAAFAKKDLMDSTTRSTNAYVVYT 309
Query: 293 SEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF------ 346
+ + AL+ N + H+R+D P AP+ D K+ VFVGNL F
Sbjct: 310 TAAAARKALSLNGTTVLDRHLRVDSIAHP--------API-DHKRCVFVGNLGFVDEEAA 360
Query: 347 -DVKDEEIYQ------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
D+E + L+ N+ VE+VRV+R P RVGKG AYV F
Sbjct: 361 ASTDDQEKKRKKSATPSDVEEGLWRTFNENAGRVESVRVVRDPSTRVGKGFAYVQF 416
>gi|194740804|ref|XP_001952880.1| GF17498 [Drosophila ananassae]
gi|190625939|gb|EDV41463.1| GF17498 [Drosophila ananassae]
Length = 325
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 28/197 (14%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIR 258
RK+ ++M + K + DE T+FVGNLP+ K+ L++ F +G + S+R+R
Sbjct: 34 RKQQPGPADNMGMEYKRDPATDEA----TVFVGNLPINTKRVQLVRLFQPYGVVQSIRLR 89
Query: 259 SVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
+ K KQ E A S++AY+V ++ Q E+ALA N NH+R+
Sbjct: 90 TA-------GGKQLFKHKQRKE-AGSLNAYVVLQTPQIAESALALNGFEFKDNHLRV--- 138
Query: 319 CPPRKKLK---GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVI 373
P KK+K E+ D K TVFVGNL + ++ ++ +F CG+ ++ +R +
Sbjct: 139 -TPAKKVKRDGSEEVNEGDSKNTVFVGNLKYSTNEKMLHDIFSSCGV------IDYIRCL 191
Query: 374 RHPHMRVGKGIAYVLFK 390
R + KG+AYV FK
Sbjct: 192 RDGE-KGCKGVAYVCFK 207
>gi|320040233|gb|EFW22166.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 465
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 121/297 (40%), Gaps = 80/297 (26%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEG----KKVGVGEKRKKADNETEDMLVHRKEEGF 218
K++KRKR + E D E IAKEEE + EKR++ D E+ G
Sbjct: 132 KSRKRKRHEAEDDLEESYMRKIAKEEEKDRKKRAAAKNEKRQRTD-ESPAADSEAGSSGP 190
Query: 219 DD---------------------------EGKLL----RTIFVGNLPL-----KVKKKTL 242
D+ E L RT+F+GN+ K KK L
Sbjct: 191 DEQKDDEESESDQEDEGPPPVHESLANTAEAAALEKSNRTVFLGNVSSEAIKSKSSKKAL 250
Query: 243 IKEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVF 291
+ F +I+S+R RS +P++ A +K + + S +AY+V+
Sbjct: 251 LAHLSSFFPSLPESSTPHKIESIRFRSTAFATAAVPKRAAFAKKDLMDSTTRSTNAYVVY 310
Query: 292 KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF----- 346
+ + AL+ N + H+R+D P AP+ D K+ VFVGNL F
Sbjct: 311 TTAAAARKALSLNGTTVLDRHLRVDSIAHP--------API-DHKRCVFVGNLGFVDEEA 361
Query: 347 --DVKDEEIYQ------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
D+E + L+ N+ VE+VRV+R P RVGKG AY+ F
Sbjct: 362 AASTDDQEKKRKKSATPSDVEEGLWRTFNENAGRVESVRVVRDPSTRVGKGFAYIQF 418
>gi|398410594|ref|XP_003856645.1| hypothetical protein MYCGRDRAFT_30158, partial [Zymoseptoria
tritici IPO323]
gi|339476530|gb|EGP91621.1| hypothetical protein MYCGRDRAFT_30158 [Zymoseptoria tritici IPO323]
Length = 298
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 40/202 (19%)
Query: 212 HRKEEGFDDE-GKLLRTIFVGNLPL-----KVKKKTLIKEFIKF-------------GEI 252
H E DDE K RT+F+GN+ KV +K L+ F ++
Sbjct: 17 HETETAADDELQKANRTVFLGNVSTSAIISKVARKALLSHLASFFTDLPETKKGDAKPKV 76
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQ-STEAALAFNMAVIGG 310
+S+R RS P + IP+K A +K++ + S +AY V+ + + EA N +
Sbjct: 77 ESLRFRSTPFA-SAIPKKAAFAKKELMDATTKSTNAYAVYSTPALAREACTRLNGTSVLA 135
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEE-IYQLF--CGLNDLESSV 367
H+R+D P K D + +F+GNL F EE +++ F CG +V
Sbjct: 136 RHMRVDSVAHPAK---------VDNHRCIFIGNLGFPADVEEGLWRTFSKCG------TV 180
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
E+VRVIR RVGKGIAYV F
Sbjct: 181 ESVRVIRDSTTRVGKGIAYVQF 202
>gi|367004328|ref|XP_003686897.1| hypothetical protein TPHA_0H02600 [Tetrapisispora phaffii CBS 4417]
gi|357525199|emb|CCE64463.1| hypothetical protein TPHA_0H02600 [Tetrapisispora phaffii CBS 4417]
Length = 458
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 65/260 (25%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKAD-NETED-----------MLVHRKEEG 217
DD+E Y Y + KE++ + +KR K+D ++ ED ++ KEE
Sbjct: 92 DDLESKY----YAKLIKEDDTE-----DKRNKSDLSDKEDDAPKEKTAAAAKILDLKEEE 142
Query: 218 FDDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKFG-------------------------E 251
+ K +TIF+GN+P V K + KEF K E
Sbjct: 143 LE---KARKTIFIGNVPNTVIGNKNIYKEFKKLFSTNPKKDEEAKEEEEKTDEKKVNKFE 199
Query: 252 IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGG 310
I+S+R RS+ + +PRK A +++++++ DSV+AYI++K+++ + N +
Sbjct: 200 IESIRFRSISF-EEMLPRKIAYVKQKLHKTRDSVNAYIIYKNKKVIKTITKNLNGYIFHD 258
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV 370
+H+R+D P +D K+++FVGNL F+ +E +++ F + +E V
Sbjct: 259 HHLRVDSVSHP---------TAHDNKRSLFVGNLDFEEAEETLWRHFAKAGE----IEYV 305
Query: 371 RVIRHPHMRVGKGIAYVLFK 390
RV+R VGKG AYV FK
Sbjct: 306 RVVRDSKTNVGKGFAYVQFK 325
>gi|303321530|ref|XP_003070759.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110456|gb|EER28614.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 557
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 122/300 (40%), Gaps = 86/300 (28%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNE----TEDMLVHRKEEGF 218
K++KRKR + E D E IAKEEE + +KR A NE T++ E G
Sbjct: 132 KSRKRKRHEAEDDLEESYMRKIAKEEEKDR----KKRAAAKNEKRQRTDESPAADSEAGS 187
Query: 219 D--DEGKLL--------------------------------RTIFVGNLPL-----KVKK 239
DE K RT+F+GN+ K K
Sbjct: 188 SGPDEQKDDEESESDQEDEGPPPVHESLANTAEAAALEKSNRTVFLGNVSSEAIKSKSSK 247
Query: 240 KTLIKEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAY 288
K L+ F +I+S+R RS +P++ A +K + + S +AY
Sbjct: 248 KALLAHLSSFFPSLPESSTPHKIESIRFRSTAFATAAVPKRAAFAKKDLMDSTTRSTNAY 307
Query: 289 IVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF-- 346
+V+ + + AL+ N + H+R+D P AP+ D K+ VFVGNL F
Sbjct: 308 VVYTTAAAARKALSLNGTTVLDRHLRVDSIAHP--------API-DHKRCVFVGNLGFVD 358
Query: 347 -----DVKDEEIYQ------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
D+E + L+ N+ VE+VRV+R P RVGKG AY+ F
Sbjct: 359 EEAAASTDDQEKKRKKSATPSDVEEGLWRTFNENAGRVESVRVVRDPSTRVGKGFAYIQF 418
>gi|307190796|gb|EFN74665.1| RNA-binding protein 34 [Camponotus floridanus]
Length = 433
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIR 258
+K+ E + L ++E D +TIF+ N+P K+ + K F KFG I+++R R
Sbjct: 129 QKQVKEEIKYQLTVERQEDIDK-----KTIFIDNIPKDTKEAEIKKVFSKFGPINNLRFR 183
Query: 259 SVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
++ + K+ +K A + KQI+ +V YI +KS++S + AL+ N + GN+I +
Sbjct: 184 NIVPQNLKMSKKVAAITKQIHPKVTTVVVYINYKSKESAQKALSMNGKIFQGNYIHVQIV 243
Query: 319 CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHP 376
K +K E ++ KK VF+ NL + + I++ F CG +E+V ++R
Sbjct: 244 SD--KSMKKE----WNNKKAVFIANLRYGTDNNTIWKHFGICG------DIESVHLVRDK 291
Query: 377 HMRVGKGIAYVLF 389
KG Y+ F
Sbjct: 292 ETGQTKGFGYINF 304
>gi|431895672|gb|ELK05098.1| RNA-binding protein 34 [Pteropus alecto]
Length = 448
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 20/151 (13%)
Query: 243 IKEFIK-FGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL 301
+K F K +G+I+SVR RSV + + +K A ++++++ + +++AY+VFK E S AL
Sbjct: 221 LKSFFKEYGQIESVRFRSVIPAEGTLSKKLAAIKRKVHPDQKNINAYVVFKDENSAARAL 280
Query: 302 AFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--C 358
+ N A I G IR+D A + D K++VFVGNLP+ ++ + + F C
Sbjct: 281 SRNGAQIADGFRIRVDLAS----ETSSRD------KRSVFVGNLPYKAEEPAVEEHFLDC 330
Query: 359 GLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
G SV AVR++R P VG+G +VLF
Sbjct: 331 G------SVVAVRIVRDPRTGVGRGFGFVLF 355
>gi|340897413|gb|EGS17003.1| hypothetical protein CTHT_0073280 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 623
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 50/204 (24%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KK L+K +I+S+R RS P TKIPR+ A
Sbjct: 237 RTVFLSNVSVEAIKDRKAKKILLKHLASPLDKKADPPQKIESIRFRSTPFGTTKIPRRVA 296
Query: 273 ILQKQINENAD-SVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K+I E S +AY+V+ + + A+ N ++ H+R D P A
Sbjct: 297 YIKKEIMEGTTKSTNAYVVYSTAAAARLAVQHLNGTIVLDRHLRADSVAHP--------A 348
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ-------------------------LFCGLNDLES 365
P+ D ++ VFVGNL F V DE +Y+ L+ +
Sbjct: 349 PI-DNRRCVFVGNLGF-VDDESVYRTKVEDGKLVTEKKKKGKEPSDVEEGLWRVFGEHAG 406
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLF 389
VE+VRV+R P RVGKG AYV F
Sbjct: 407 KVESVRVVRDPATRVGKGFAYVQF 430
>gi|302310751|ref|XP_455433.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|223590101|sp|Q6CKV6.2|NOP12_KLULA RecName: Full=Nucleolar protein 12
gi|199425080|emb|CAG98141.2| KLLA0F07799p [Kluyveromyces lactis]
Length = 462
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 52/204 (25%)
Query: 222 GKLLRTIFVGNLPLKV-KKKTLIKEF-------------------------------IKF 249
K RTIF+GN+P +V K + KEF +KF
Sbjct: 160 AKAERTIFIGNVPNEVITSKKVYKEFKKLLSKDPRSENDDHDDGEEDEEEEESKTKDVKF 219
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAF-NMAVI 308
++S+R RS+ + +PRK A + ++++++ DS++AY V+ S + + N V
Sbjct: 220 N-VESIRFRSIAF-EEALPRKVAFVHQKLHKSRDSINAYAVYGSSNPVKIMCQYLNGKVF 277
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P +P +D +++VFVGNL F+ +E +++ F CG
Sbjct: 278 NDHHLRVDSVTHP--------SP-HDKRRSVFVGNLDFEEVEESLWKHFEPCG------D 322
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+E VR+IR +GKG AYV FK
Sbjct: 323 IEYVRIIRDSKTNMGKGFAYVQFK 346
>gi|449297210|gb|EMC93228.1| hypothetical protein BAUCODRAFT_46871, partial [Baudoinia
compniacensis UAMH 10762]
Length = 479
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 102/228 (44%), Gaps = 67/228 (29%)
Query: 212 HRKEEGFDDE-GKLLRTIFVGNLPL-----KVKKKTLIKEFIKF--------------GE 251
H +E D E K RTIF+GN+ K +KTLIK F +
Sbjct: 127 HETQESADVELQKANRTIFLGNVSTTAISSKSARKTLIKHLTSFFDSLPPPKDTNPPAPK 186
Query: 252 IDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQ-STEAALAFNMAVIG 309
++S+R RS P T IPRK A +K + + S +AY V+ S EAA N ++I
Sbjct: 187 LESLRFRSTPYA-TSIPRKAAFARKDLMDATTKSTNAYAVYSSPHLCREAAKRLNGSIIL 245
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL------------------------- 344
H+R+D P AP D ++ VFVGNL
Sbjct: 246 DRHLRVDVVAHP--------APT-DHRRCVFVGNLGFVDDESNIQDANEADGYEKRKRGK 296
Query: 345 -PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P DV +E +++ F CG +VE+VRVIR RVGKG+AYV F
Sbjct: 297 EPADV-EEGLWRTFSKCG------TVESVRVIRDSTTRVGKGVAYVQF 337
>gi|195144442|ref|XP_002013205.1| GL23520 [Drosophila persimilis]
gi|194102148|gb|EDW24191.1| GL23520 [Drosophila persimilis]
Length = 434
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 26/171 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADS 284
T+FVGNLP+ K+ L++ +G + S+R+R+ G + + + + A S
Sbjct: 158 TVFVGNLPINTKRVQLVRLLKPYGNVKSIRLRTA----------GGKQLFKHKQRKGAGS 207
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED-APL-YDIKKTVFVG 342
++AY+V S + E ALA N NH+R+ P K G+D P D K+T+FVG
Sbjct: 208 LNAYVVLDSAEIAERALALNGTEFKENHLRV---TPAAKSESGDDKGPKDADAKRTIFVG 264
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+L + +E++ ++F CG +E +R ++ + KG+AYV FKT
Sbjct: 265 SLKYSATEEKLREIFSSCG------EIEYIRCLQEGE-KGCKGVAYVCFKT 308
>gi|367018418|ref|XP_003658494.1| hypothetical protein MYCTH_2294324 [Myceliophthora thermophila ATCC
42464]
gi|347005761|gb|AEO53249.1| hypothetical protein MYCTH_2294324 [Myceliophthora thermophila ATCC
42464]
Length = 608
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 51/205 (24%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KKTL++ +++S+R RS P IP++ A
Sbjct: 231 RTVFLSNVSVEAIKSRKAKKTLLRHLSSVLDKNADPPQKVESIRFRSTPFQSAGIPKRAA 290
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K++ E S +AY+V+ + ++ A+A N ++ H+R+D P A
Sbjct: 291 YIKKEVLEATTKSTNAYVVYSTTAASRLAVAQLNGTIVLDRHLRVDSVAHP--------A 342
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLNDLE 364
P+ D ++ VFVGNL F V DE +Y L+ +
Sbjct: 343 PI-DHRRCVFVGNLGF-VDDETVYNTKIDEEGKEVVVKRKRTKTPMDVEEGLWRVFGEEA 400
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF 389
VE+VRV+R P RVGKG AYV F
Sbjct: 401 GKVESVRVVRDPVTRVGKGFAYVQF 425
>gi|198452886|ref|XP_002137558.1| GA27287 [Drosophila pseudoobscura pseudoobscura]
gi|198132120|gb|EDY68116.1| GA27287 [Drosophila pseudoobscura pseudoobscura]
Length = 429
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 26/171 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADS 284
T+FVGNLP+ K+ L++ +G + S+R+R+ G + + + + A S
Sbjct: 153 TVFVGNLPINTKRVQLVRLLKPYGNVKSIRLRTA----------GGKQLFKHKQRKGAGS 202
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED-APL-YDIKKTVFVG 342
++AY+V S + E ALA N NH+R+ P K G+D P D K+T+FVG
Sbjct: 203 LNAYVVLDSAEIAERALALNGTEFKENHLRV---TPAAKSESGDDKGPKDADAKRTIFVG 259
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+L + +E++ ++F CG +E +R ++ + KG+AYV FKT
Sbjct: 260 SLKYSATEEKLREIFSSCG------EIEYIRCLQEGE-KGCKGVAYVCFKT 303
>gi|221484519|gb|EEE22813.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
Length = 802
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 19/178 (10%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFG--EIDSVRIRSVPIIDT-KIPRKGAILQKQIN 279
K RT+FVGNLPL K + + G +++S+R+RS+P+ R G +++ Q
Sbjct: 553 KDCRTVFVGNLPLSGWKPPALYRHLGIGRKDVESIRLRSIPVHPKFNKCRLGGLVKGQFT 612
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA----PLYDI 335
+ D +AYIV K + + L + G +R+D A GE +D
Sbjct: 613 DLKDFQNAYIVLKDRRLFRSILQHDGTSFQGRRLRVDEA--------GERGRNVFSRFDR 664
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
KKTVFVGNLP +E++ + + +V+AVR+IR KG +V F+ RV
Sbjct: 665 KKTVFVGNLPSRCSEEDLRRAL----ESNGTVKAVRIIRDKVTTESKGFGFVCFEDRV 718
>gi|66359446|ref|XP_626901.1| Nop12p nucleolar protein, RRM domain [Cryptosporidium parvum Iowa
II]
gi|46228092|gb|EAK88991.1| Nop12p nucleolar protein, RRM domain [Cryptosporidium parvum Iowa
II]
gi|323508733|dbj|BAJ77260.1| cgd3_3500 [Cryptosporidium parvum]
gi|323509799|dbj|BAJ77792.1| cgd3_3500 [Cryptosporidium parvum]
Length = 349
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRK--GAILQ 275
+++ ++ T+FVGN+ L + +K L+ + IK GE++S+R RS+PI +K GA L+
Sbjct: 75 NNDPRIENTLFVGNVALHISEKELLSKLEIKQGEVESMRFRSLPIHPKFASKKKVGAALE 134
Query: 276 KQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
+ N+ + +AYIV K ++ + + F+ V+ GN +RL A KG +D
Sbjct: 135 -CFSGNSSTKNAYIVLKEKERMKPIIDKFSGIVLAGNILRLTPAS------KGNQFSTFD 187
Query: 335 IKKTVFVGNLP-FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
K+TVF+G LP F +DE + F ++ E V +VR+I+ KG +VLF R
Sbjct: 188 RKRTVFIGGLPKFCTEDE--LRRFVTMSLNEDCVHSVRIIKSATTGKPKGFGFVLFNDR 244
>gi|237839677|ref|XP_002369136.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211966800|gb|EEB01996.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 802
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 19/178 (10%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFG--EIDSVRIRSVPIIDT-KIPRKGAILQKQIN 279
K RT+FVGNLPL K + + G +++S+R+RS+P+ R G +++ Q
Sbjct: 553 KDCRTVFVGNLPLSGWKPPALYRHLGIGRKDVESIRLRSIPVHPKFNKCRLGGLVKGQFT 612
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA----PLYDI 335
+ D +AYIV K + + L + G +R+D A GE +D
Sbjct: 613 DLKDFQNAYIVLKDRRLFRSILQHDGTSFQGRRLRVDEA--------GERGRNVFSRFDR 664
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
KKTVFVGNLP +E++ + + +V+AVR+IR KG +V F+ RV
Sbjct: 665 KKTVFVGNLPSRCSEEDLRRAL----ESNGTVKAVRIIRDKVTTESKGFGFVCFEDRV 718
>gi|221504716|gb|EEE30381.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
VEG]
Length = 802
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 19/178 (10%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFG--EIDSVRIRSVPIIDT-KIPRKGAILQKQIN 279
K RT+FVGNLPL K + + G +++S+R+RS+P+ R G +++ Q
Sbjct: 553 KDCRTVFVGNLPLSGWKPPALYRHLGIGRKDVESIRLRSIPVHPKFNKCRLGGLVKGQFT 612
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA----PLYDI 335
+ D +AYIV K + + L + G +R+D A GE +D
Sbjct: 613 DLKDFQNAYIVLKDRRLFRSILQHDGTSFQGRRLRVDEA--------GERGRNVFSRFDR 664
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
KKTVFVGNLP +E++ + + +V+AVR+IR KG +V F+ RV
Sbjct: 665 KKTVFVGNLPSRCSEEDLRRAL----ESNGTVKAVRIIRDKVTTESKGFGFVCFEDRV 718
>gi|148679876|gb|EDL11823.1| RNA binding motif protein 34, isoform CRA_b [Mus musculus]
Length = 432
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 86/167 (51%), Gaps = 39/167 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK +P T + +K A ++++ + + S+
Sbjct: 199 RTVFVGNLPVTCNKK-------------------MPAEGT-LTKKLAAIKRKFHPDQKSI 238
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D L E A K++VFVGNL
Sbjct: 239 NAYVVFKDESAAAKALQRNGAQIAEGFRIRVD--------LASETA--SRDKRSVFVGNL 288
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P+ ++D + + F CG S+ AVR++R+P VG+G YVLF
Sbjct: 289 PYKIEDSALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLF 329
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R++FVGNLP K++ L + F+ G I +VRI P+ T + R
Sbjct: 281 RSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPL--TGVGRG--------------- 323
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC 319
Y++F++ + AL N + + G +R+ R+
Sbjct: 324 FGYVLFENTDAVHLALKLNNSELMGRKLRVMRSV 357
>gi|440463708|gb|ELQ33262.1| nucleolar protein 12 [Magnaporthe oryzae Y34]
gi|440483702|gb|ELQ64051.1| nucleolar protein 12 [Magnaporthe oryzae P131]
Length = 551
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 122/285 (42%), Gaps = 68/285 (23%)
Query: 159 SENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNET------------ 206
SEN + +KRK+ D D K + +A EE+ +K ++ KK NE+
Sbjct: 112 SENNRKRKRKQADAHDDLETKYFQKVAAEEDEEK-NRSKRSKKERNESTKDSADAPGGLI 170
Query: 207 -EDMLVHRKEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLI--------KEFIKFGEI 252
E +L ++ D G RT+F+ N+ K KK L+ KE I
Sbjct: 171 HESLLPDNEKTELDKAG---RTVFLSNVSTEAITSKSAKKQLMAHLASVLDKEAKPPQTI 227
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGG 310
+S+R RSVP+ +P++ A++ + + + S +AY+V+ AA+ N ++
Sbjct: 228 ESLRFRSVPVATAAMPKRAAVITEAVMDATTKSANAYVVYSDAAGARAAVTKLNGTMVLD 287
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ--------------- 355
H+R D P AP+ D ++ VFVGNL F V DE +
Sbjct: 288 RHLRTDSVAHP--------APV-DHRRCVFVGNLGF-VDDETVVNVTVDEDGKQKEEKRK 337
Query: 356 -----------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
L+ VE VRV+R RVGKGIAYV F
Sbjct: 338 RTKVPMDVEEGLWRTFGKSAGKVENVRVVRDGVTRVGKGIAYVQF 382
>gi|389631593|ref|XP_003713449.1| nucleolar protein 12 [Magnaporthe oryzae 70-15]
gi|351645782|gb|EHA53642.1| nucleolar protein 12 [Magnaporthe oryzae 70-15]
Length = 551
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 122/285 (42%), Gaps = 68/285 (23%)
Query: 159 SENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNET------------ 206
SEN + +KRK+ D D K + +A EE+ +K ++ KK NE+
Sbjct: 112 SENNRKRKRKQADAHDDLETKYFQKVAAEEDEEK-NRSKRSKKERNESTKDSADAPGGLI 170
Query: 207 -EDMLVHRKEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLI--------KEFIKFGEI 252
E +L ++ D G RT+F+ N+ K KK L+ KE I
Sbjct: 171 HESLLPDNEKTELDKAG---RTVFLSNVSTEAITSKSAKKQLMAHLASVLDKEAKPPQTI 227
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGG 310
+S+R RSVP+ +P++ A++ + + + S +AY+V+ AA+ N ++
Sbjct: 228 ESLRFRSVPVATAAMPKRAAVITEAVMDATTKSANAYVVYSDAAGARAAVTKLNGTMVLD 287
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ--------------- 355
H+R D P AP+ D ++ VFVGNL F V DE +
Sbjct: 288 RHLRTDSVAHP--------APV-DHRRCVFVGNLGF-VDDETVVNVTVDEDGKQKEEKRK 337
Query: 356 -----------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
L+ VE VRV+R RVGKGIAYV F
Sbjct: 338 RTKVPMDVEEGLWRTFGKSAGKVENVRVVRDGVTRVGKGIAYVQF 382
>gi|67602925|ref|XP_666511.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657520|gb|EAL36281.1| hypothetical protein Chro.30395 [Cryptosporidium hominis]
Length = 349
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRK--GAILQ 275
+++ ++ T+FVGN+ L + +K L+ + IK GE++S+R RS+PI +K GA L+
Sbjct: 75 NNDPRIENTLFVGNVALHISEKELLSKLEIKQGEVESMRFRSLPIHPKFASKKKVGAALE 134
Query: 276 KQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
+ N+ + +AYIV K ++ + + F+ ++ GN +RL A KG +D
Sbjct: 135 -CFSGNSSTKNAYIVLKEKERMKPIIDKFSGIILAGNILRLTPAS------KGNQFSTFD 187
Query: 335 IKKTVFVGNLP-FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
K+TVF+G LP F +DE + F ++ E V +VR+I+ KG +VLF R
Sbjct: 188 RKRTVFIGGLPKFCTEDE--LRRFVTMSLNEDCVHSVRIIKSATTGKPKGFGFVLFNDR 244
>gi|119484168|ref|XP_001261987.1| RNA binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119410143|gb|EAW20090.1| RNA binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 537
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 137/308 (44%), Gaps = 92/308 (29%)
Query: 164 TKKRKR---DDVEKDYVEKKYGVIAKEEEG---KKVGVGEKRKKADNETED--------- 208
+KKRKR +D+E+ Y+ + IAKEE+ K+ KR+K + E +D
Sbjct: 113 SKKRKRAPAEDLEETYMRR----IAKEEQNEQEKRRAEKAKRQKVEEEGKDSDSVSDKSK 168
Query: 209 --------------MLVHRKEEGFDDEGKLL----RTIFVGNLPLKV-----KKKTLIKE 245
+ H + G D E K L RT+F+GN+ +V KKTL+K
Sbjct: 169 DEDDESSEEEDEITVPKHETQSG-DPESKELEKSNRTVFLGNVSSQVIRSKSAKKTLLKH 227
Query: 246 FIKF----------GEIDSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKS 293
F +++S+R RSV K+P++ A +++I ++ S +AY V+ +
Sbjct: 228 LASFLSTLPESTGPHKVESIRFRSVAFASGGKVPKRAAFARREILDDTTPSTNAYAVYST 287
Query: 294 EQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF------ 346
Q+ +A A N V+ H+R+D P + D K+ VFVGNL F
Sbjct: 288 VQAARKAPAALNGTVVLDRHLRVDSVAHPSQ---------IDHKRCVFVGNLDFVDNETD 338
Query: 347 DVKDEEIYQLFCGLNDLE---------------------SSVEAVRVIRHPHMRVGKGIA 385
+DE+ + G D+E +VE+VRV+R RVGKG A
Sbjct: 339 PEEDEKKKKKKSGPADVEEGLWRTFNAHTKGSKERTSTKGNVESVRVVRDRTTRVGKGFA 398
Query: 386 YVLFKTRV 393
YV F +V
Sbjct: 399 YVQFYDQV 406
>gi|402078123|gb|EJT73472.1| nucleolar protein 12 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 532
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 51/208 (24%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLI--------KEFIKFGEIDSVRIRSVPIIDTKIPR 269
K RT+F+ N+ K KK L+ K+ IDS+R RSVP+ +P+
Sbjct: 168 KAARTVFLSNVSTEAITSKAAKKQLLAHLSSVFKKDASPPQSIDSLRFRSVPVATAAMPK 227
Query: 270 KGAILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKG 327
+ A++ + + E S +AY+V+ + A+A N ++ H+R+D P
Sbjct: 228 RAAVITQAVMEATTKSANAYVVYSDTAAARVAVASLNGTIVLERHLRVDSVAHP------ 281
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLN 361
AP+ D K+ VFVGNL F V DE + L+
Sbjct: 282 --APV-DHKRCVFVGNLGF-VDDETVMNTTVDDDGKEKTEKRKRTKVPMDVEEGLWRTFG 337
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLF 389
VE+VRV+R RVGKGIAYV F
Sbjct: 338 KSAGKVESVRVVRDQTTRVGKGIAYVQF 365
>gi|453089190|gb|EMF17230.1| hypothetical protein SEPMUDRAFT_146322 [Mycosphaerella populorum
SO2202]
Length = 565
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 102/226 (45%), Gaps = 65/226 (28%)
Query: 212 HRKEEGFDDE-GKLLRTIFVGNLPL-----KVKKKTLIKEFIKF------------GEID 253
H EE D E K RT+FVGN+ K +K L+ F +++
Sbjct: 196 HETEEAKDIELDKANRTVFVGNVSTTAISSKPARKALLVHLASFFPTQSSVKAGPKPKVE 255
Query: 254 SVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQ-STEAALAFNMAVIGGN 311
S+R RS P + IP+K A +K++ + + S +AY+V+ + + EA + N V+
Sbjct: 256 SIRFRSTPYA-SAIPKKAAFAKKELMDATSKSTNAYVVYSTPSLAREACKSLNGTVVLDR 314
Query: 312 HIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL--------------------------P 345
H+R+D P K D ++ VFVGNL P
Sbjct: 315 HLRVDSVAHPAK---------VDNRRCVFVGNLGFVDDESNIQDANEDDGREKRKRGKEP 365
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
DV +E +++ F CG +VE+VRVIR RVGKGIAYV F
Sbjct: 366 ADV-EEGLWRCFAKCG------TVESVRVIRDNTTRVGKGIAYVQF 404
>gi|340503205|gb|EGR29817.1| RNA binding motif protein 34, putative [Ichthyophthirius
multifiliis]
Length = 330
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 23/166 (13%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGN+ + K K + K F ++G+I+ + RS+P+ +KI +K AI+ KQ+ +
Sbjct: 64 RTVFVGNIHINAKSKDIQKIFKQYGKIEKIWFRSIPVEKSKIGKKAAIMLKQVKYDQQQN 123
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ + K Q ++ + + I N KKL D KT+F+GNLP
Sbjct: 124 QQFFI-KKVQRRQSWIKNSKKNIYIN------LFLNLKKL--------DYTKTIFIGNLP 168
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F + +E + F CG +++ +R+IR P+ GKG Y+ F
Sbjct: 169 FQITEEALRNHFIDCG------NIQNLRIIRDPYTHNGKGFGYIYF 208
>gi|167377342|ref|XP_001734363.1| nucleolar protein [Entamoeba dispar SAW760]
gi|165904154|gb|EDR29480.1| nucleolar protein, putative [Entamoeba dispar SAW760]
Length = 422
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA-DS 284
RT+F+ N+ +KVK + K +FG+++S R R I + +K L+K+ + +
Sbjct: 185 RTVFIANINIKVKPAQMKKFLKQFGKLESYRFRGGAFIQDEKSKKVHFLKKEYDTKVRKT 244
Query: 285 VHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ Y V+ + E++ +AA N G H+R D K +I+KT+FVGN
Sbjct: 245 QNCYAVYSTPEEAEKAAKEINGKEFLGYHLRADWEVNKGMKR--------NIRKTIFVGN 296
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
LPF +++E++ F + ++ES V+++R +G+GI +V F
Sbjct: 297 LPFKMEEEQLRHFFSKVGEIES----VKIVRESKSGMGRGIGFVTF 338
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+ +TIFVGNLP K++++ L F K GEI+SV+I
Sbjct: 288 IRKTIFVGNLPFKMEEEQLRHFFSKVGEIESVKI 321
>gi|223998584|ref|XP_002288965.1| rna-binding protein [Thalassiosira pseudonana CCMP1335]
gi|220976073|gb|EED94401.1| rna-binding protein [Thalassiosira pseudonana CCMP1335]
Length = 198
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII-----DTKIPRK-GAILQKQIN 279
RTIFVGNLP + ++ L F G + S R+RS+ + + + RK A K ++
Sbjct: 5 RTIFVGNLPPDISRRALAGIFKPCGTVTSARLRSMALPPDQAGNQNLMRKVCANTGKLLS 64
Query: 280 ENA-DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+N S Y+VFKS S E AL N + IR+D A + + + + ++
Sbjct: 65 DNPKKSAQGYVVFKSVDSVEEALKLNNTTYETHTIRVDHA-----TVSSWNDEMIEPSRS 119
Query: 339 VFVGNLPFDVKDEEIYQLFC------GLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VF+GNLP+ ++E + LF G +D + V VR++R + KG AYV F+
Sbjct: 120 VFIGNLPYGAEEETLRDLFLKGVGADGDDDEDPVVSGVRIVRDKETQKCKGFAYVTFR 177
>gi|336261210|ref|XP_003345396.1| hypothetical protein SMAC_04627 [Sordaria macrospora k-hell]
gi|380090650|emb|CCC11645.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 591
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 51/205 (24%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ + + KKTL+K +++S+R RS IP++ A
Sbjct: 200 RTVFLSNVAVEAVTDRAAKKTLMKHMASVLDKEAKPAQKVESIRFRSTAFATAAIPKRAA 259
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K + E S +AY+VF + + A + N ++ H+R+D P A
Sbjct: 260 YIKKSVMEATTKSTNAYVVFSTPAAARLACSKLNGTIVLDRHVRVDSVAHP--------A 311
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLNDLE 364
P+ D K+ VFVGNL F V DE + Q L+
Sbjct: 312 PV-DHKRCVFVGNLGF-VDDESVLQTKVNEEGKEVTEKKKRTKQPMDVEEGLWRVFGKEG 369
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF 389
VE+VRV+R P RVGKG AYV F
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQF 394
>gi|452846765|gb|EME48697.1| hypothetical protein DOTSEDRAFT_141994 [Dothistroma septosporum
NZE10]
Length = 562
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 63/223 (28%)
Query: 214 KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIKF---------GEI----DSV 255
+++ DD K RTIF+ N+ K ++TL+K F GEI +S+
Sbjct: 198 QQQADDDLSKANRTIFLSNVSTDAISSKASRRTLLKHLGSFFDKLTVPKPGEIKHKVESI 257
Query: 256 RIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHI 313
R RS P + IP+K A +K++ + S +AY V+ S + EA+ N + HI
Sbjct: 258 RFRSTPYA-SAIPKKAAFAKKELMDATTKSTNAYAVYSSPILAREASKRLNGTTVLDRHI 316
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF-----DVKD------------------ 350
R+D P K D ++ VFVGNL F +++D
Sbjct: 317 RVDEVAHPAK---------VDNRRCVFVGNLGFVDDESNIQDANEEDGREKRKRGKEPAD 367
Query: 351 --EEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
E +++ F CG VE+VRVIR RVGKGIAYV F
Sbjct: 368 IEEGLWRTFGKCG------KVESVRVIRDSTTRVGKGIAYVQF 404
>gi|116182340|ref|XP_001221019.1| hypothetical protein CHGG_01798 [Chaetomium globosum CBS 148.51]
gi|88186095|gb|EAQ93563.1| hypothetical protein CHGG_01798 [Chaetomium globosum CBS 148.51]
Length = 641
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 129/304 (42%), Gaps = 85/304 (27%)
Query: 152 SVEGKKRSENKKTKKRKRDD---VEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETED 208
+ G + E +K K+++RDD +E +Y+E+ +A EEE KR KAD+ +D
Sbjct: 181 ATRGPSQDEARKRKRKQRDDDEDLEANYLER----LANEEEPSG-----KRHKADSTEKD 231
Query: 209 ML--VHRKEEGFDDE--------------------GKLLRTIFVGNLPLKV-----KKKT 241
++ + E+ DDE K RT+F+ N+ + KKT
Sbjct: 232 VVPTASKVEKEDDDELGGDVPVHESVAARPAVSELEKANRTVFLSNVAAEAITSRKAKKT 291
Query: 242 LIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGAILQKQINE-NADSVHAYIVFK 292
L+K +++S+R RS IP++ A ++K++ E S +AY V+
Sbjct: 292 LLKHLSSILDKKADPPQKVESIRFRSTAFESAGIPKRAAFIKKEVLEATTKSTNAYAVYS 351
Query: 293 SEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE 351
+ + A+A N V+ H+R+D P D ++ VFVGNL F V DE
Sbjct: 352 TTAAARLAVAQLNGTVVLDRHLRVDSVAHPA---------AVDHRRCVFVGNLGF-VDDE 401
Query: 352 EIYQ--------------------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIA 385
+Y L+ VE+VRV+R RVGKG A
Sbjct: 402 SVYNVKVNEEGKEVGERRKRTKTPMDVEEGLWRVFGKEGGKVESVRVVRDAATRVGKGFA 461
Query: 386 YVLF 389
YV F
Sbjct: 462 YVQF 465
>gi|346978411|gb|EGY21863.1| nucleolar protein [Verticillium dahliae VdLs.17]
Length = 550
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 43/197 (21%)
Query: 226 RTIFVGNLP-----LKVKKKTLIKEF---IKFGE-IDSVRIRSVPIIDTKIPRKGAILQK 276
RT+F+ N+ KV KKTL+ ++ GE I+S+R RS+ +P++ A +
Sbjct: 192 RTVFLANVAAEASTTKVAKKTLMTHLSTVLEKGEKIESIRFRSLAFSAGSMPKRAAYITH 251
Query: 277 QINE-NADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
+ E S +AY+V+ + + +A N +V+ HIR+D P AP D
Sbjct: 252 SLMEATTKSANAYVVYSTPAAARKACTTLNGSVVLDRHIRVDSVAHP--------APT-D 302
Query: 335 IKKTVFVGNLPFDVKDEEIYQ----------------------LFCGLNDLESSVEAVRV 372
++ VFVGNL F V DE + L+ + VE+VRV
Sbjct: 303 HRRCVFVGNLGF-VDDETVLNTDASGETKERKRNKVPSDIEEGLWRVFGKEDGKVESVRV 361
Query: 373 IRHPHMRVGKGIAYVLF 389
IR P RVGKG AYV F
Sbjct: 362 IRDPKTRVGKGFAYVQF 378
>gi|302411744|ref|XP_003003705.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
gi|261357610|gb|EEY20038.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
Length = 550
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 110/253 (43%), Gaps = 66/253 (26%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIF 229
DDVEK+ + ++AK+ K D T+D V K RT+F
Sbjct: 159 DDVEKEVLPVHESLVAKD-------------KNDANTKDTDVE----------KASRTVF 195
Query: 230 VGNLP-----LKVKKKTLIKEF---IKFGE-IDSVRIRSVPIIDTKIPRKGAILQKQINE 280
+ N+ K KKTL+ ++ GE I+S+R RS+ +P++ A + + E
Sbjct: 196 LANVAAEASTTKAAKKTLMTHLSTVLEKGEKIESIRFRSLAFSAGSMPKRAAYITHSLME 255
Query: 281 -NADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
S +AY+V+ + + +A N +V+ HIR+D P AP D ++
Sbjct: 256 ATTKSANAYVVYSTPAAARKACTTLNGSVVLDRHIRVDSVAHP--------APT-DHRRC 306
Query: 339 VFVGNLPFDVKDEEIYQ----------------------LFCGLNDLESSVEAVRVIRHP 376
VFVGNL F V DE + L+ + VE+VRVIR P
Sbjct: 307 VFVGNLGF-VDDETVLNTDASGETKERKRNKVPSDIEEGLWRVFGKEDGKVESVRVIRDP 365
Query: 377 HMRVGKGIAYVLF 389
RVGKG AYV F
Sbjct: 366 KTRVGKGFAYVQF 378
>gi|195390115|ref|XP_002053714.1| GJ23196 [Drosophila virilis]
gi|194151800|gb|EDW67234.1| GJ23196 [Drosophila virilis]
Length = 439
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 21/170 (12%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVGNLP+ K+ L++ FG + S+R+R+ + + + + A S++
Sbjct: 160 TIFVGNLPINTKRVQLVRLLQPFGTVHSIRLRTAG--------GKQLFKHKQRKGAGSLN 211
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKL--KGEDAPL--YDIKKTVFVG 342
AY+V S E ALA N NH+R+ A R + G D D+K+TVFVG
Sbjct: 212 AYVVLDSAVIAEKALALNGTEFKENHLRVTPAAQVRGAVGAAGNDQASNDADVKRTVFVG 271
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
NL + ++++ ++F CG ++ +R ++ + KG+AYV F+
Sbjct: 272 NLKYTASEQKLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQ 314
>gi|195054168|ref|XP_001993998.1| GH17992 [Drosophila grimshawi]
gi|193895868|gb|EDV94734.1| GH17992 [Drosophila grimshawi]
Length = 444
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIF+GNLP+ K+ L++ FG ++S+R+R+ K KQ E A S++
Sbjct: 166 TIFIGNLPINTKRVQLVRLLQPFGTVNSIRLRTA-------GGKHLFKHKQRKE-AGSLN 217
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP------RKKLKGEDAPLYDIKKTVF 340
AY+V S Q E ALA N NH+R+ A D K+T+F
Sbjct: 218 AYVVLNSAQVAEKALALNGTEFKENHLRVTPAAKAGTTAGNDLSSASSAPSDADNKRTIF 277
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VGNL + +E++ ++F CG ++ +R + H R KG+AYV F+
Sbjct: 278 VGNLKYSANEEKLREIFSSCG------EIDYIRCL-HDGERGCKGVAYVCFQ 322
>gi|195069101|ref|XP_001996948.1| GH22238 [Drosophila grimshawi]
gi|193891982|gb|EDV90848.1| GH22238 [Drosophila grimshawi]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIF+GNLP+ K+ L++ FG ++S+R+R+ K KQ E A S++
Sbjct: 166 TIFIGNLPINTKRVQLVRLLQPFGTVNSIRLRTA-------GGKHLFKHKQRKE-AGSLN 217
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP------RKKLKGEDAPLYDIKKTVF 340
AY+V S Q E ALA N NH+R+ A D K+T+F
Sbjct: 218 AYVVLNSAQVAEKALALNGTEFKENHLRVTPAAKAGTTAGNDLSSASSAPSDADNKRTIF 277
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VGNL + +E++ ++F CG ++ +R + H R KG+AYV F+
Sbjct: 278 VGNLKYSANEEKLREIFSSCG------EIDYIRCL-HDGERGCKGVAYVCFQ 322
>gi|194880593|ref|XP_001974476.1| GG21761 [Drosophila erecta]
gi|190657663|gb|EDV54876.1| GG21761 [Drosophila erecta]
Length = 455
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 172 VEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVG 231
++K+ +E K ++ K + KV K+ KA+N+ E+ + ++E DE T+FVG
Sbjct: 129 IKKEKLEDKPTIVPKAKAKGKV---TKKAKANNKNEEGV--KRERNPADEA---STVFVG 180
Query: 232 NLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVF 291
NLP+ K+ L+K F +G + S+R+R+ + + + + A S++AY+V
Sbjct: 181 NLPINTKRVQLVKLFQPYGLVQSIRLRTA--------GGKQLFKHKQRKGAGSLNAYVVL 232
Query: 292 KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL--YDIKKTVFVGNLPFDVK 349
++ + ALA N NH+R+ A +G+D D K+T+FVG+L +
Sbjct: 233 QNPDIAKQALAMNGTEFKENHLRVTPAAKAEGFGQGKDEQPNDKDAKRTIFVGSLKYSAN 292
Query: 350 DEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+E++ ++F CG ++ +R ++ KG+AYV F+
Sbjct: 293 EEQLREIFSSCG------EIDYIRCLQDGDKGC-KGVAYVCFQ 328
>gi|358379161|gb|EHK16842.1| hypothetical protein TRIVIDRAFT_115017, partial [Trichoderma virens
Gv29-8]
Length = 538
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 52/285 (18%)
Query: 147 QNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKV--GVGEKRKKA-D 203
+NSN + K + + K+ +K+ DD+E Y+ K E GK++ G G+ + A +
Sbjct: 106 ENSNDVEQAKTQRDRKRKRKQDNDDLEGRYLAKLADDDEPEPSGKRLKGGEGDAQDSAKE 165
Query: 204 NETEDMLVHR---KEEGFDDEGKLLRTIFVGNLPLK-VKKKTLIKEFIKF---------- 249
+ ++ VH +E + K RT+F+GN+ + + KT KE +K
Sbjct: 166 GDDDEAPVHESLTQESKQSEVEKAARTVFLGNVATEAISSKTAKKELMKHLSSVLDKDAS 225
Query: 250 --GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNM 305
+I+S+R RSV +P++ A + K + + S +AY VF + + + N
Sbjct: 226 PPQKIESLRFRSVAFSTGSMPKRAAYITKALMDATTKSTNAYAVFSTPAAARKVVTELNG 285
Query: 306 AVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE-------------- 351
I G HIR+D P +P+ + + VFVGNL F V DE
Sbjct: 286 TEILGRHIRVDSVAHP--------SPM-NHRNCVFVGNLGF-VDDETVLNRKADGETVEK 335
Query: 352 -------EIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+I + + VE VRV+R RVGKG AYV F
Sbjct: 336 KRNKVPSDIEEGLWRTFGTQGKVENVRVVRDSKTRVGKGFAYVQF 380
>gi|407036329|gb|EKE38119.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 413
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA-DS 284
RT+F+ N+ +KVK + K +FG+++S R R I + +K L+K+ + +
Sbjct: 176 RTVFIANINIKVKPAQMKKFLKQFGKLESYRFRGGAFIQDEKSKKVHFLKKEYDTKVRKT 235
Query: 285 VHAYIVFK-SEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ Y V+ SE + +AA + G H+R D KK +I++T+FVGN
Sbjct: 236 QNCYAVYATSEDAEKAAKEIDGKEFLGYHLRADWEVNKGKK--------RNIRQTIFVGN 287
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
LPF +++E++ +LF + +E V+++R +G+GI +V F
Sbjct: 288 LPFKMEEEQLRKLFSKAGE----IERVKIVRESKSGMGRGIGFVTF 329
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+ +TIFVGNLP K++++ L K F K GEI+ V+I
Sbjct: 279 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKI 312
>gi|452987409|gb|EME87164.1| hypothetical protein MYCFIDRAFT_22137, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 261
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 17/142 (11%)
Query: 251 EIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQ-STEAALAFNMAVI 308
+++S+R RS P T IP+K A +K++ + S +AY+V+ +E+ + EA N ++
Sbjct: 51 KVESIRFRSTPYA-TAIPKKAAFAKKELMDATTKSTNAYVVYSTEKLAREAVRHLNGTIV 109
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEE-IYQLFCGLNDLESSV 367
H+R+D P K D ++ VFVGNL F EE +++ F V
Sbjct: 110 LERHLRVDSVAHPAK---------IDNRRCVFVGNLGFPADIEEGLWRTFSK----SGKV 156
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
E+VRVIR RVGKGIAYV F
Sbjct: 157 ESVRVIRDSTTRVGKGIAYVQF 178
>gi|336464220|gb|EGO52460.1| nucleolar protein 12 [Neurospora tetrasperma FGSC 2508]
Length = 594
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 51/205 (24%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KKTL+K +++S+R RS IP++ A
Sbjct: 200 RTVFLSNVAVEAVTSRSAKKTLMKHLASVLDKEAKPAQKVESIRFRSTAFATAAIPKRAA 259
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K + E S +AY+V+ + + A + N ++ HIR+D P A
Sbjct: 260 YIKKSVMEATTKSTNAYVVYSTPAAARLACSKLNGTIVLDRHIRVDSVAHP--------A 311
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLNDLE 364
P+ D K+ VFVGNL F V DE + Q L+
Sbjct: 312 PV-DHKRCVFVGNLGF-VDDETVLQVKVDEDGKEVTEKKKRTKQPMDVEEGLWRVFGKEG 369
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF 389
VE+VRV+R P RVGKG AYV F
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQF 394
>gi|429329920|gb|AFZ81679.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 321
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 16/170 (9%)
Query: 228 IFVGNLPLKVKKKT-LIKEF-IKFGEIDSVRIRSVPIIDTKIP--RKGAILQKQINENAD 283
+F+GN+PL +K K+ LIK+ + + SV RS+P+ D K +K I++++ + D
Sbjct: 104 VFIGNVPLSIKTKSDLIKKLNLDPKIVKSVHFRSLPV-DPKFASNKKVGIIKQKFTDAKD 162
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ +AY+ SE+ L N + G H+ ++ P + KKTVFVG
Sbjct: 163 TQNAYVKLVSEEYLCDILNKNTIEVDGKHLFINATSP-------NSFSKFSRKKTVFVGR 215
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
LP ++E++ LF + S V++VR+IR P KG +V F TR+
Sbjct: 216 LPPSTNEDELFNLFSNV----SPVKSVRIIRDPKTLKSKGFGFVEFDTRI 261
>gi|195344626|ref|XP_002038882.1| GM17146 [Drosophila sechellia]
gi|194134012|gb|EDW55528.1| GM17146 [Drosophila sechellia]
Length = 436
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 19/168 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K+ L+K F +G + S+R+R+ + + + + A S++
Sbjct: 157 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA--------GGKQLFKHKQRKVAGSLN 208
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY--DIKKTVFVGNL 344
AY+V ++ + + ALA N NH+R+ A K +G+D D K+T+FVG+L
Sbjct: 209 AYVVLQNPEIAQQALALNGTEFKENHLRVTPASMAEKFGQGKDQQPSDKDAKRTIFVGSL 268
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E++ ++F CG ++ +R ++ + KG+AYV F+
Sbjct: 269 KYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQ 309
>gi|302923245|ref|XP_003053634.1| hypothetical protein NECHADRAFT_74992 [Nectria haematococca mpVI
77-13-4]
gi|256734575|gb|EEU47921.1| hypothetical protein NECHADRAFT_74992 [Nectria haematococca mpVI
77-13-4]
Length = 569
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 113/269 (42%), Gaps = 59/269 (21%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVG------VGEKRKKADNETE----DMLVHR---KEE 216
DD+E +Y+ K E GK+ GEK + D+E D+ VH KE+
Sbjct: 147 DDLEGNYLSKVAAEEEAERAGKRQKNDGSKEDGEKVEGEDDEASGDESDIPVHETLAKED 206
Query: 217 GFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIKFGE--------IDSVRIRSVPII 263
D K RT+F+ N+ K KKTL+ E I+S+R RSV
Sbjct: 207 KSSDLEKAARTVFLANVSTEAISSKTAKKTLMAHLSSILEKDASPPQTIESIRFRSVAFA 266
Query: 264 DTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPP 321
+P++ A + K + + S +AY+V+ + + A+A N + H+R+D P
Sbjct: 267 GGSLPKRAAYITKSLMDATTKSANAYVVYSTIAAAREAVAKLNGTQVLDRHLRVDSVAHP 326
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC------------------GLN-- 361
D ++ VFVGNL F V DE I GL
Sbjct: 327 SP---------TDHRRCVFVGNLGF-VDDETILATNADGDTTQKKRNKTPSDIEEGLWRT 376
Query: 362 -DLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ VE VRV+R RVGKGIAYV F
Sbjct: 377 FSTQGKVENVRVVRDSKTRVGKGIAYVQF 405
>gi|115491023|ref|XP_001210139.1| nucleolar protein 12 [Aspergillus terreus NIH2624]
gi|114196999|gb|EAU38699.1| nucleolar protein 12 [Aspergillus terreus NIH2624]
Length = 532
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 55/209 (26%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDT-KIPR 269
RT+F+GN+ K KKTL++ +++S+R RS KIP+
Sbjct: 201 RTVFLGNVSSEAIKSKSAKKTLLRHLASVLSTLPESTGPHKVESIRFRSTAFASGGKIPK 260
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
+ A ++++ +E S +AY V+ + Q AL+ N V+ H+R+D P K
Sbjct: 261 RAAFAKRELLDETTPSTNAYAVYSTIQGARKALSLNGTVVLDRHLRVDSVAHPAK----- 315
Query: 329 DAPLYDIKKTVFVGNL--------------------PFDVKDEEIYQLFC--------GL 360
D K+ VFVGNL P DV +E +++ F G
Sbjct: 316 ----IDNKRCVFVGNLDFVDQEGEMEGEEKKKKKRAPADV-EEGLWRTFNAHTGGSKKGD 370
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ + SVE+VRV+R RVGKG AYV F
Sbjct: 371 DAKKGSVESVRVVRDRATRVGKGFAYVQF 399
>gi|449704866|gb|EMD45026.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 414
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA-DS 284
RT+F+ N+ +KVK + K +FG+++S R R I + +K L+K+ + +
Sbjct: 177 RTVFIANVNIKVKPAQMKKFLKQFGKLESYRFRGGAFIQDEKSKKVHFLKKEYDTKVRKT 236
Query: 285 VHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ Y V+ + E + +AA + G H+R D KK +I++T+FVGN
Sbjct: 237 QNCYAVYTTPEDAEKAAKEIDGKEFLGYHLRADWEVNKGKK--------RNIRQTIFVGN 288
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
LPF +++E++ +LF + +E V+++R +G+GI +V F
Sbjct: 289 LPFKMEEEQLRKLFSKAGE----IERVKIVRESKSGMGRGIGFVTF 330
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+ +TIFVGNLP K++++ L K F K GEI+ V+I
Sbjct: 280 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKI 313
>gi|171695272|ref|XP_001912560.1| hypothetical protein [Podospora anserina S mat+]
gi|170947878|emb|CAP60042.1| unnamed protein product [Podospora anserina S mat+]
Length = 516
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 131/304 (43%), Gaps = 79/304 (25%)
Query: 152 SVEGKKRSENKKTKKRKR------DDVEKDYVEK--------KYGVIAKEEEGKKVGVGE 197
S K ++E + +KRKR +D+E Y E+ + G K+ GK V +
Sbjct: 45 SAAAKSKAEEEDGRKRKRKQRNDDEDLEAKYFERLQEDDEEERSGKRRKDANGKAAAVEK 104
Query: 198 KRKKADNETE---DMLVHRKE-----EGFDDEGKLLRTIFVGNLPL-----KVKKKTLIK 244
K D +++ D V + E + + K RT+F+ N+ L + KKTL+K
Sbjct: 105 TEKTGDKDSDLDSDAEVPKHESLTANDAASELEKANRTVFLSNVSLEATTSRTAKKTLLK 164
Query: 245 EFIKF--------GEIDSVRIRSVPIIDTKIPRKGAILQKQINE-NADSVHAYIVFKSEQ 295
+++S+R RS IP++ A ++K++ E +AY V+ + +
Sbjct: 165 HLASILDPKADPPQKVESIRFRSTAFATAAIPKRAAFIKKEVMEATTKCTNAYAVYSTPE 224
Query: 296 STEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL---------- 344
+ A+ N V+ H+R+D P AP+ D K+ VFVGNL
Sbjct: 225 AVRLAVQKLNGTVVLDRHLRVDSVAHP--------APV-DHKRCVFVGNLGFVDDETVLN 275
Query: 345 -------------------PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIA 385
P DV +E ++++F VE+VRV+R RVGKGIA
Sbjct: 276 VKVDDEGNQTTTKKKRTKQPMDV-EEGLWRVF---GKEAGKVESVRVVRDNVTRVGKGIA 331
Query: 386 YVLF 389
YV F
Sbjct: 332 YVQF 335
>gi|67477043|ref|XP_654040.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471058|gb|EAL48654.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 414
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA-DS 284
RT+F+ N+ +KVK + K +FG+++S R R I + +K L+K+ + +
Sbjct: 177 RTVFIANVNIKVKPAQMKKFLKQFGKLESYRFRGGAFIQDEKSKKVHFLKKEYDTKVRKT 236
Query: 285 VHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ Y V+ + E + +AA + G H+R D KK +I++T+FVGN
Sbjct: 237 QNCYAVYTTPEDAEKAAKEIDGKEFLGYHLRADWEVNKGKK--------RNIRQTIFVGN 288
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
LPF +++E++ +LF + +E V+++R +G+GI +V F
Sbjct: 289 LPFKMEEEQLRKLFSKAGE----IERVKIVRESKSGMGRGIGFVTF 330
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+ +TIFVGNLP K++++ L K F K GEI+ V+I
Sbjct: 280 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKI 313
>gi|158291352|ref|XP_001237501.2| AGAP003171-PA [Anopheles gambiae str. PEST]
gi|157017734|gb|EAU77012.2| AGAP003171-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 27/167 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVGNLP +K+K L F K+G I ++R+R+ +T + + K++ S++
Sbjct: 111 TIFVGNLPKTIKQKDLRVMFSKYGTIQTIRLRT----NTGLK----MFNKKVLSKVPSLN 162
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+V+ S++ E A + ++ N IR+ CP KK G D K TVFVGN+
Sbjct: 163 AYVVYNSKEEMEQACQLDGEMVSNNRIRV---CPADKKQIG------DAKATVFVGNIAR 213
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
D ++++ F + +E VR I + +AYV FK V
Sbjct: 214 GTTDNDLHEFFSRV----GPIEYVRQIGDKY------VAYVCFKKGV 250
>gi|70983440|ref|XP_747247.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|74667235|sp|Q4WCH5.1|NOP12_ASPFU RecName: Full=Nucleolar protein 12
gi|66844873|gb|EAL85209.1| RNA binding protein, putative [Aspergillus fumigatus Af293]
Length = 538
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 139/309 (44%), Gaps = 93/309 (30%)
Query: 164 TKKRKR---DDVEKDYVEKKYGVIAKEEEG---KKVGVGEKRKKADNETED--------- 208
+KKRKR +D+E+ Y+ + IAKEE+ K+ KR+K + +D
Sbjct: 113 SKKRKRAPAEDLEETYMRR----IAKEEQKEQEKRRAEKAKRQKVEEGGKDSDPVSDKSK 168
Query: 209 ------------MLVHRKE-EGFDDEGKLL----RTIFVGN-----LPLKVKKKTLIKEF 246
+ V R E + D E K L RT+F+GN + K KKTL+K
Sbjct: 169 DGRDESSEEEDEITVPRHETQSGDPESKELEKSNRTVFLGNVSSQAIKSKSAKKTLLKHL 228
Query: 247 IKF----------GEIDSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKSE 294
F +++S+R RSV K+P++ A +++I ++ S +AY+V+ +
Sbjct: 229 ASFLSTLPESTGPHKVESIRFRSVAFASGGKVPKRAAFARREILDDTTPSTNAYVVYSTV 288
Query: 295 QST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL--------- 344
Q+ +A A N V+ H+R+D P + D K+ VFVGNL
Sbjct: 289 QAARKAPAALNGTVVLDRHLRVDSVAHPSQ---------IDHKRCVFVGNLDFVDNETDP 339
Query: 345 -------------PFDVKDEEIYQLFC----GLNDLESS---VEAVRVIRHPHMRVGKGI 384
P DV +E +++ F G + S+ VE+VRV+R RVGKG
Sbjct: 340 EEDDKKKKKKKSGPADV-EEGLWRTFNAHTKGSKERASTRGNVESVRVVRDRTTRVGKGF 398
Query: 385 AYVLFKTRV 393
AYV F +V
Sbjct: 399 AYVQFYDQV 407
>gi|346324418|gb|EGX94015.1| nucleolar protein 12 [Cordyceps militaris CM01]
Length = 552
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 57/230 (24%)
Query: 203 DNETEDMLVHR---KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLI--------KEF 246
D + ED+ H K+ + K RT+F+ N+ K KK L+ KE
Sbjct: 177 DADKEDLPTHESLSKDSAAAETNKAARTVFLANVSAEAVSSKAAKKQLLAHLATALDKEA 236
Query: 247 IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE-NADSVHAYIVFKSEQSTE-AALAFN 304
+++S+R RSV +P++ A + K + E S +AY+VF ++ + N
Sbjct: 237 QPLQKVESIRFRSVAFSTGSMPKRAAYITKSVMEATTHSTNAYVVFSTDAAARRVCQQLN 296
Query: 305 MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL-------------------- 344
I G H+R+D P ++ VFVGNL
Sbjct: 297 GTEILGRHLRVDSVAHPSPTAH---------RRCVFVGNLGFVDDETVLNTNKDGDKGTK 347
Query: 345 -----PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P DV +E +++LF VE VRV+R P RVGKG AYV F
Sbjct: 348 KRNKVPSDV-EEGLWRLFSK----NGKVENVRVVRDPKTRVGKGFAYVQF 392
>gi|408400703|gb|EKJ79780.1| hypothetical protein FPSE_00060 [Fusarium pseudograminearum CS3096]
Length = 555
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 71/292 (24%)
Query: 152 SVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETE---- 207
+ E K E K+ +K DD+E Y++K +A EEE + G KR+K D T+
Sbjct: 122 ATEDKSNKERKRKRKNDNDDLEGKYLDK----VAAEEEADRAG---KRQKNDALTKTEKP 174
Query: 208 -----------DMLVHR---KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIK 248
D+ VH K+ D K RT+F+ N+ K KKTL+
Sbjct: 175 AVDEEDAGNESDIPVHETLVKDSKASDLDKAARTVFLANVSTEAISSKSAKKTLMTHLSS 234
Query: 249 FGE--------IDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEA 299
E I+S+R RSV +P++ A + K + + S +AY+V+ + +
Sbjct: 235 VLEKDATPPQTIESLRFRSVAFAGGSLPKRAAYITKSLMDSTTKSANAYVVYSTTAAART 294
Query: 300 ALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE------- 351
A N + H+R+D P +P D ++ VFVGNL F V DE
Sbjct: 295 AATKLNGTQVLDRHLRVDSVAHP--------SPT-DHRRCVFVGNLGF-VDDETVLNTNA 344
Query: 352 --------------EIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+I + + VE VRV+R RVGKG AYV F
Sbjct: 345 EGDTTEKKKNKTPSDIEEGLWRTFSTQGKVENVRVVRDSKTRVGKGFAYVQF 396
>gi|46105869|ref|XP_380574.1| hypothetical protein FG00398.1 [Gibberella zeae PH-1]
gi|83288330|sp|Q4IQW0.1|NOP12_GIBZE RecName: Full=Nucleolar protein 12
Length = 559
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 71/292 (24%)
Query: 152 SVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETE---- 207
+ E K E K+ +K DD+E Y++K +A EEE + G KR+K D T+
Sbjct: 126 ATEDKSNKERKRKRKNDNDDLEGKYLDK----VAAEEEADRAG---KRQKNDALTKTEKP 178
Query: 208 -----------DMLVHR---KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIK 248
D+ VH K+ D K RT+F+ N+ K KKTL+
Sbjct: 179 AVDEEDAGNESDIPVHETLVKDSKASDLDKAARTVFLANVSTEAISSKSAKKTLMAHLSS 238
Query: 249 FGE--------IDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEA 299
E I+S+R RSV +P++ A + K + + S +AY+V+ + +
Sbjct: 239 VLEKDATPPQTIESLRFRSVAFAGGSLPKRAAYITKSLMDSTTKSANAYVVYSTTAAART 298
Query: 300 ALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE------- 351
A N + H+R+D P +P D ++ VFVGNL F V DE
Sbjct: 299 AATKLNGTQVLDRHLRVDSVAHP--------SPT-DHRRCVFVGNLGF-VDDETVLNTNA 348
Query: 352 --------------EIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+I + + VE VRV+R RVGKG AYV F
Sbjct: 349 EGDTTEKKKNKTPSDIEEGLWRTFSTQGKVENVRVVRDSKTRVGKGFAYVQF 400
>gi|159123747|gb|EDP48866.1| RNA binding protein, putative [Aspergillus fumigatus A1163]
Length = 538
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 139/309 (44%), Gaps = 93/309 (30%)
Query: 164 TKKRKR---DDVEKDYVEKKYGVIAKEEEG---KKVGVGEKRKKADNETED--------- 208
+KKRKR +D+E+ Y+ + IAKEE+ K+ KR+K + +D
Sbjct: 113 SKKRKRAPAEDLEETYMRR----IAKEEQKEQEKRRAEKAKRQKVEEGGKDSDPVSDKSK 168
Query: 209 ------------MLVHRKE-EGFDDEGKLL----RTIFVGN-----LPLKVKKKTLIKEF 246
+ V R E + D E K L RT+F+GN + K KKTL+K
Sbjct: 169 DGRDESSEEEDEITVPRHETQSGDPESKELEKSNRTVFLGNVSSQAIKSKSAKKTLLKHL 228
Query: 247 IKF----------GEIDSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKSE 294
F +++S+R RSV K+P++ A +++I ++ S +AY+V+ +
Sbjct: 229 ASFLSTLPESTGPHKVESIRFRSVAFASGGKVPKRAAFARREILDDTTPSTNAYVVYSTV 288
Query: 295 QST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL--------- 344
Q+ +A A N V+ H+R+D P + D K+ VFVGNL
Sbjct: 289 QAARKAPAALNGTVVLDRHLRVDSVAHPSQ---------IDHKRCVFVGNLDFVDNETDP 339
Query: 345 -------------PFDVKDEEIYQLFC----GLNDLESS---VEAVRVIRHPHMRVGKGI 384
P DV +E +++ F G + S+ VE+VRV+R RVGKG
Sbjct: 340 EEDDKKKKKKKSGPADV-EEGLWRTFNAHTKGSKERASTRGNVESVRVVRDRTTRVGKGF 398
Query: 385 AYVLFKTRV 393
AYV F +V
Sbjct: 399 AYVQFYDQV 407
>gi|195579698|ref|XP_002079698.1| GD21886 [Drosophila simulans]
gi|194191707|gb|EDX05283.1| GD21886 [Drosophila simulans]
Length = 436
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 19/168 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K+ L+K F +G + S+R+R+ + + + + A S++
Sbjct: 157 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA--------GGKQLFKHKQRKVAGSLN 208
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY--DIKKTVFVGNL 344
AY+V ++ + + AL+ N NH+R+ A K +G+D D K+T+FVG+L
Sbjct: 209 AYVVLQNPEIAQQALSLNGTEFKENHLRVTPASMAEKFSQGKDQQPSDKDAKRTIFVGSL 268
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E++ ++F CG ++ +R ++ + KG+AYV F+
Sbjct: 269 KYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQ 309
>gi|195112762|ref|XP_002000941.1| GI10515 [Drosophila mojavensis]
gi|193917535|gb|EDW16402.1| GI10515 [Drosophila mojavensis]
Length = 433
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 26/172 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV---PIIDTKIPRKGAILQKQINENAD 283
TIFVGNLP+ K+ +++ FG + S+R+R+ + K RK A+
Sbjct: 158 TIFVGNLPINTKRVQIVRLLKPFGAVHSIRLRTAGGKKLFKLK-QRKAAV---------- 206
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA--CPPRKKL-KGEDAPLYDIKKTVF 340
S++AY+V + + + ALA N NH+R+ A C K + G+ + D+K+TVF
Sbjct: 207 SLNAYVVLDNPEIAQKALALNGTQFKENHLRVTPAAKCGEVKDVGNGQASSEADVKRTVF 266
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+GNL + +E++ ++F CG ++ +R ++ + KG+AYV F+
Sbjct: 267 IGNLKYSASEEKLREIFSSCG------EIDYIRCLQDGE-KGCKGVAYVCFQ 311
>gi|347969404|ref|XP_312862.4| AGAP003173-PA [Anopheles gambiae str. PEST]
gi|333468509|gb|EAA44783.4| AGAP003173-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 27/167 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVGNLP +K+K L F K+G I ++R+R+ +T + + K+ S++
Sbjct: 111 TIFVGNLPKTIKQKDLRVMFSKYGTIQTIRLRT----NTGLK----LFNKKALSKVPSLN 162
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+V+ S++ E A + ++ N IR+ CP KK G D K TVFVGN+
Sbjct: 163 AYVVYNSQEEMEQACQLDGEMVSNNRIRV---CPADKKQIG------DAKATVFVGNIAR 213
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
D ++++ F + +E VR I + +AYV FK V
Sbjct: 214 GTTDNDLHEFFSRV----GPIEYVRQIGDKY------VAYVCFKKGV 250
>gi|209882052|ref|XP_002142463.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558069|gb|EEA08114.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 308
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 14/177 (7%)
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIP---RKGAILQK 276
+ K+ RT+FVGN+ L V +K L+K+ + +I+S+R RS+P + K + GAIL+
Sbjct: 83 DSKIDRTVFVGNIGLNVVEKDLLKKLELTRADIESIRFRSLP-VHPKFSHNRKLGAILEG 141
Query: 277 QINENADSVHAYIVFK-SEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI 335
+ +DS +AYIV K S + E F ++ G+ +RL A ++ ++D
Sbjct: 142 -FSCKSDSKNAYIVLKDSSKVPELVKKFTGIILAGHTMRLSPAYIV------DNFNIFDR 194
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
K+T+FVGNLP ++E+ Q F N + V+AVR++R KG ++LF R
Sbjct: 195 KRTIFVGNLPSLCSEDELRQ-FVMQNIGTNCVDAVRIVRSKITGKTKGFGFILFNDR 250
>gi|350296302|gb|EGZ77279.1| nucleolar protein 12 [Neurospora tetrasperma FGSC 2509]
Length = 594
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 51/205 (24%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KK L+K +++S+R RS IP++ A
Sbjct: 200 RTVFLSNVAVEAVTSRSAKKALMKHMASVLDKEAKPAQKVESIRFRSTAFATAAIPKRAA 259
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K + E S +AY+V+ + + A + N ++ HIR+D P A
Sbjct: 260 YIKKSVMEATTKSTNAYVVYSTPAAARLACSKLNGTIVLDRHIRVDSVAHP--------A 311
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLNDLE 364
P+ D K+ VFVGNL F V DE + Q L+
Sbjct: 312 PV-DHKRCVFVGNLGF-VDDETVLQVKVDEDGKEVTEKKKRTKQPMDVEEGLWRVFGKEG 369
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF 389
VE+VRV+R P RVGKG AYV F
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQF 394
>gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster]
Length = 435
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 19/168 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K+ L+K F +G + S+R+R+ + + + + A S++
Sbjct: 156 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA--------GGKQLFKHKQRKVAGSLN 207
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK--KLKGEDAPLYDIKKTVFVGNL 344
AY+V + + + ALA N + NH+R+ A K + K + D K+T+FVG+L
Sbjct: 208 AYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDQQPSDKDAKRTIFVGSL 267
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E++ ++F CG ++ +R ++ + KG+AYV F+
Sbjct: 268 KYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQ 308
>gi|255953657|ref|XP_002567581.1| Pc21g05350 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589292|emb|CAP95432.1| Pc21g05350 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 521
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 56/210 (26%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKFG----------EIDSVRIRSVPIIDTK-IPR 269
RT+F+GN+ K KKTL++ F +I+S+R RSV IP+
Sbjct: 191 RTVFLGNVSTEAIKSKTAKKTLLRHLTSFCSTLPESTGPHKIESIRFRSVAFASGGGIPK 250
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ + +++I +E S +AY V+ S Q+ +A A N ++ H+R+D P +
Sbjct: 251 RASFAKREILDETTPSTNAYAVYTSLQAARKAPAALNGTIVLDRHLRVDSLAHPAE---- 306
Query: 328 EDAPLYDIKKTVFVGNL----------------------PFDVKDEEIYQLF---CGLND 362
D K+ VFVGNL P D+ +E ++++F G D
Sbjct: 307 -----IDHKRCVFVGNLSFIDSETPEEDEKTGKKKKVRAPADI-EEGLWRIFNAHTGGKD 360
Query: 363 ---LESSVEAVRVIRHPHMRVGKGIAYVLF 389
++ +VE VRVIR RVGKG AYV F
Sbjct: 361 KKAVKKNVEFVRVIRDSTTRVGKGFAYVQF 390
>gi|340384626|ref|XP_003390812.1| PREDICTED: nucleolar protein 12-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 22/154 (14%)
Query: 240 KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI-LQKQINENADSVHAYIVFKSEQSTE 298
K ++K FG ++S+R RSV + K+P + A L KQ+ + + Y+V ++E+S
Sbjct: 1 KDILKLVSPFGPVESLRQRSVAVSPGKLPVEVARKLGKQLT--GTTTNFYVVMETEESAS 58
Query: 299 AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF- 357
A L N + G HIR+D A P D +VFVGN+PF +E++ ++F
Sbjct: 59 ACLELNGREVDGRHIRVDLA-----------TPTNDTHCSVFVGNVPFGADEEKLRKVFE 107
Query: 358 -CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
CG ++ +R+I+ + KG AYV FK
Sbjct: 108 SCG------PIDGIRIIKDTRTGINKGFAYVKFK 135
>gi|121719695|ref|XP_001276546.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119404758|gb|EAW15120.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 536
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 56/210 (26%)
Query: 226 RTIFVGNLP-----LKVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDT-KIPR 269
RT+F+GN+ K KKTL+K F +++S+R RSV K+P+
Sbjct: 197 RTVFLGNVSNEAIKSKSGKKTLLKHLASFLSTLPESTGPHKVESIRFRSVAFASGGKVPK 256
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ ++ + ++ S +AY V+ + Q+ +A A N V+ H+R+D P
Sbjct: 257 RADFARRDVLDDTTPSTNAYAVYSTIQAARKAPAALNGTVVLDRHLRVDSIAHP------ 310
Query: 328 EDAPLYDIKKTVFVGNL---------------------PFDVKDEEIYQLFC----GLND 362
+P+ D K+ VFVGNL P DV +E +++ F G D
Sbjct: 311 --SPV-DNKRCVFVGNLDFVDNETNPDDDEKKKKKRSVPADV-EEGLWRTFNVQTKGSKD 366
Query: 363 LESS---VEAVRVIRHPHMRVGKGIAYVLF 389
SS VE+VRV+R P RVGKG AYV F
Sbjct: 367 KSSSRGNVESVRVVRDPITRVGKGFAYVQF 396
>gi|342874417|gb|EGU76431.1| hypothetical protein FOXB_13109 [Fusarium oxysporum Fo5176]
Length = 560
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 129/296 (43%), Gaps = 79/296 (26%)
Query: 152 SVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKAD--NETEDM 209
+ + K + K+ +K + DD+E Y++K + EEE ++ G KR+K D N+TE
Sbjct: 125 ATQDKSNKDRKRKRKNENDDLEGRYLDK----LVAEEEAERAG---KRQKNDALNKTEKA 177
Query: 210 LVHRKEEGFD----------------DEGKLLRTIFVGNLPL-----KVKKKTLI----- 243
+ ++ G D D K RT+F+ N+ K KKTL+
Sbjct: 178 VAEDEDAGNDSDIPVHETLAKDSKSSDLEKAARTVFLANVSTEAINSKAAKKTLMAHLSS 237
Query: 244 ---KEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFK-SEQSTE 298
K+ I+S+R RSV +P++ A + K + + S +AY+V+ S + +
Sbjct: 238 ILDKDATPPQTIESLRFRSVAFAGGSLPKRAAYITKSLMDATTKSANAYVVYSTSAAARK 297
Query: 299 AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL-------------- 344
AA N + H+R+D P +P D ++ VFVGNL
Sbjct: 298 AAAELNGTQVLERHLRVDSVAHP--------SPT-DHRRCVFVGNLGFVDDETVLNTNAD 348
Query: 345 -----------PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P DV +E +++ F + VE VRV+R RVGKG AYV F
Sbjct: 349 GDTTEKKKNKTPSDV-EEGLWRTFS----TQGKVENVRVVRDSKTRVGKGFAYVQF 399
>gi|238508431|ref|XP_002385409.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
gi|317157950|ref|XP_001826678.2| nucleolar protein 12 [Aspergillus oryzae RIB40]
gi|220688928|gb|EED45280.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
Length = 527
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 129/303 (42%), Gaps = 90/303 (29%)
Query: 164 TKKRKR---DDVEKDYVEKKYGVIAKEE---EGKKVGVGEKRKKADNETEDMLV------ 211
++KRKR +D+E+ Y+ + IAKEE E K+ KR+K + E ED
Sbjct: 104 SRKRKRAAGEDLEESYMRR----IAKEEQKEEQKRRAEKAKRQKGEGEEEDEATSTDKSD 159
Query: 212 ------------------HRKEEG---FDDEGKLLRTIFVGNLP-----LKVKKKTLIKE 245
H G D K RT+F+ N+ K KKTL+K
Sbjct: 160 DENEDESSDEDEEVAIPKHETVTGDAQSSDIDKSNRTVFLSNVSNEAIKSKSAKKTLLKH 219
Query: 246 FIKF----------GEIDSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKS 293
F F +++S+R RS KIP++ A ++++ +E S +AYIV+ +
Sbjct: 220 FESFLSTLPESTGPHKVESIRFRSTAFASGGKIPKRAAFAKREVLDETTPSTNAYIVYST 279
Query: 294 EQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF------ 346
Q+ +A +A N V+ H+R+D P AP+ D K+ VFVGNL F
Sbjct: 280 VQAARKAPVALNGTVVLDRHVRVDSVAHP--------APV-DNKRCVFVGNLNFVDQEGN 330
Query: 347 -------------DVKDEEIYQLFCGLND-------LESSVEAVRVIRHPHMRVGKGIAY 386
+E +++ F +VE+VRV+R RV KG AY
Sbjct: 331 ADDEEKPKKKKAPADVEEGLWRTFNAHTSKPKDQATRRGNVESVRVVRDSVTRVSKGFAY 390
Query: 387 VLF 389
V F
Sbjct: 391 VQF 393
>gi|85091441|ref|XP_958903.1| nucleolar protein 12 [Neurospora crassa OR74A]
gi|74696324|sp|Q7S2L7.1|NOP12_NEUCR RecName: Full=Nucleolar protein 12
gi|28920294|gb|EAA29667.1| nucleolar protein 12 [Neurospora crassa OR74A]
Length = 594
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 51/205 (24%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KK L+K +++S+R RS IP++ A
Sbjct: 200 RTVFLSNVAVEAVTSRSAKKALMKHMASVLDKEAKPAQKVESIRFRSTAFATAAIPKRAA 259
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K + E S +AY+V+ + + A + N ++ HIR+D P A
Sbjct: 260 YIKKSVMEATTKSTNAYVVYSTPAAARLACSKLNGTIVLDRHIRVDSVAHP--------A 311
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLNDLE 364
P+ D K+ VFVGNL F V DE + Q L+
Sbjct: 312 PV-DHKRCVFVGNLGF-VDDETVLQVKVDEDGKEVTEKKKRTKQPMDVEEGLWRVFGKEG 369
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF 389
VE+VRV+R P RVGKG AYV F
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQF 394
>gi|195453715|ref|XP_002073909.1| GK12898 [Drosophila willistoni]
gi|194169994|gb|EDW84895.1| GK12898 [Drosophila willistoni]
Length = 421
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 19/167 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK-QINENADSV 285
T+FVGNLP+ K+ LI+ F +G ++S+R+R+ G +L K + ++A S+
Sbjct: 149 TVFVGNLPINTKRVQLIRLFEPYGTVNSIRLRTAG---------GKLLFKHKQRKSAGSL 199
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+V +S + + AL N NH+R+ A + + D K+ VFVGNL
Sbjct: 200 NAYVVLQSPEVAQKALTLNGTEFKENHLRVTLATQTGAGDGDKASSDADAKRCVFVGNLK 259
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +++++ +F CG ++ +R ++ + G+AYV FK
Sbjct: 260 YSATEKKLHDVFSSCG------EIDNIRCLQD-GTKGCSGVAYVNFK 299
>gi|83775425|dbj|BAE65545.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864245|gb|EIT73541.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 561
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 129/303 (42%), Gaps = 90/303 (29%)
Query: 164 TKKRKR---DDVEKDYVEKKYGVIAKEE---EGKKVGVGEKRKKADNETEDMLV------ 211
++KRKR +D+E+ Y+ + IAKEE E K+ KR+K + E ED
Sbjct: 138 SRKRKRAAGEDLEESYMRR----IAKEEQKEEQKRRAEKAKRQKGEGEEEDEATSTDKSD 193
Query: 212 ------------------HRKEEG---FDDEGKLLRTIFVGNLP-----LKVKKKTLIKE 245
H G D K RT+F+ N+ K KKTL+K
Sbjct: 194 DENEDESSDEDEEVAIPKHETVTGDAQSSDIDKSNRTVFLSNVSNEAIKSKSAKKTLLKH 253
Query: 246 FIKF----------GEIDSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKS 293
F F +++S+R RS KIP++ A ++++ +E S +AYIV+ +
Sbjct: 254 FESFLSTLPESTGPHKVESIRFRSTAFASGGKIPKRAAFAKREVLDETTPSTNAYIVYST 313
Query: 294 EQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF------ 346
Q+ +A +A N V+ H+R+D P AP+ D K+ VFVGNL F
Sbjct: 314 VQAARKAPVALNGTVVLDRHVRVDSVAHP--------APV-DNKRCVFVGNLNFVDQEGN 364
Query: 347 -------------DVKDEEIYQLFCGLND-------LESSVEAVRVIRHPHMRVGKGIAY 386
+E +++ F +VE+VRV+R RV KG AY
Sbjct: 365 ADDEEKPKKKKAPADVEEGLWRTFNAHTSKPKDQATRRGNVESVRVVRDSVTRVSKGFAY 424
Query: 387 VLF 389
V F
Sbjct: 425 VQF 427
>gi|240275476|gb|EER38990.1| nucleolar protein [Ajellomyces capsulatus H143]
gi|325091313|gb|EGC44623.1| nucleolar protein 12 [Ajellomyces capsulatus H88]
Length = 613
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 138/330 (41%), Gaps = 111/330 (33%)
Query: 162 KKTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK--------------KADN 204
+K +KRKR +D+E+ Y+ + AKE+E ++ +++K + DN
Sbjct: 131 EKRRKRKRGGAEDIEESYMRRMAKEEAKEDEKRRSEKAKRQKIVESVGRESDSSDSERDN 190
Query: 205 ETEDMLVHRKEEGFDD------------EGKLL----RTIFVGNLPL-----KVKKKTLI 243
E + E+G D+ + LL RTIF+ N+ K KKTL+
Sbjct: 191 EEGEDGTSDDEDGIDNPPIVHESNSNKPDAALLDKSARTIFLSNVSTEAIKSKSAKKTLL 250
Query: 244 KEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFK 292
K F +I+S+R RS +P++ A ++++ + S +AY+V+
Sbjct: 251 KHLCSFFPSIPESATPHKIESIRFRSTAFSTQSMPKRAAYAKRELMDSTTRSTNAYVVYS 310
Query: 293 SEQSTEAA-LAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL------- 344
+ + A A N ++I H+R+D P AP+ D K+ +FVGNL
Sbjct: 311 TTAAARGAPRALNGSIILDRHLRVDSVAHP--------API-DYKRCIFVGNLGFVDEET 361
Query: 345 ----------------------PFDVKDEEIYQLF-----CGLNDLESS----------- 366
P DV +E +++ F G + SS
Sbjct: 362 PTDEQVAGQQKEKKKRKQKHAPPADV-EEGLWRTFNEHTAAGKSADPSSNKISKDTGPYP 420
Query: 367 ------VEAVRVIRHPHMRVGKGIAYVLFK 390
VE+VRVIR P R+GKG+AYV F+
Sbjct: 421 NLGGGPVESVRVIRDPATRIGKGVAYVQFR 450
>gi|320168946|gb|EFW45845.1| hypothetical protein CAOG_03829 [Capsaspora owczarzaki ATCC 30864]
Length = 617
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D + RT+F GN+ + V K L + FG + SVR RSV I K+ RK A + ++
Sbjct: 313 NDPQRAERTLFFGNVDVNVTDKVLRRLCAPFGVVVSVRFRSVAFISPKLDRKVAFARGKL 372
Query: 279 NENADSVHAYIVFK-SEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK 337
+ ++AY+V + + + AALA N V+ G H+R+D A K +D +K
Sbjct: 373 HPERHVMNAYVVMREAAVARRAALALNGTVLEGKHLRVDIASNSNKP--------HDHRK 424
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+VFVGNLP + ++E +++ F D+ + VR++R VGKG +V FK
Sbjct: 425 SVFVGNLPMNAEEEALWEAFGKCGDIAT----VRLVRDAETNVGKGFGFVSFK 473
>gi|24584762|ref|NP_609822.1| CG12288 [Drosophila melanogaster]
gi|7298360|gb|AAF53587.1| CG12288 [Drosophila melanogaster]
Length = 435
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 19/168 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K+ L+K F +G + S+R+R+ + + + + A S++
Sbjct: 156 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA--------GGKQLFKHKQRKVAGSLN 207
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK--KLKGEDAPLYDIKKTVFVGNL 344
AY+V + + + ALA N + NH+R+ A K + K + D K+T+FVG+L
Sbjct: 208 AYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSL 267
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E++ ++F CG ++ +R ++ + KG+AYV F+
Sbjct: 268 KYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQ 308
>gi|358336551|dbj|GAA55028.1| nucleolar protein 12 [Clonorchis sinensis]
Length = 459
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 43/216 (19%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKF-----------GEI 252
N D R +E L RT+FVGNLP +KK L K F +
Sbjct: 112 NAVRDRSAQRSNRHLRNE-HLKRTLFVGNLPPGLKKTELRKLFDSVIKQDSASVQSNCRV 170
Query: 253 DSVRIRSV-PIIDT--KIPRKGAILQKQINEN-ADSVHAYIVFKSEQSTEAALAFNMAVI 308
+SVR R V P+ K+ RK A++Q + + + ++ AY+V S A L+ N +
Sbjct: 171 ESVRFRGVVPVTGGTGKLARKRAVIQGEFSAGVSQNMIAYVVLTSTAGIPAGLSLNGHWL 230
Query: 309 ---------------GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEI 353
G HIR+DRA R P+ K++VF+GNLPFDV++EE+
Sbjct: 231 QTKPISTDTPTDYQSSGKHIRVDRALRHR--------PVEQFKQSVFLGNLPFDVQEEEV 282
Query: 354 YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ + VR+IR KG +V +
Sbjct: 283 RSAMSKFGPIAN----VRLIRDKETGAVKGFGFVQY 314
>gi|302667361|ref|XP_003025267.1| RNA binding protein, putative [Trichophyton verrucosum HKI 0517]
gi|291189365|gb|EFE44656.1| RNA binding protein, putative [Trichophyton verrucosum HKI 0517]
Length = 551
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 55/213 (25%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFG---------------EIDSVRIRSVPI 262
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 194 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPSSSSTTTPSTTHKIESLRFRSTAF 253
Query: 263 IDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
T +PR+ A +K++ + +AY+V+ + + + AL N ++ HIR+D P
Sbjct: 254 SSTALPRRAAYAKKELMDSTTKGTNAYVVYSTAVAAKKALKLNGTIVLDRHIRVDSVSKP 313
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQLF 357
AP+ D + VFVGNL F DV +E +++ F
Sbjct: 314 --------APV-DHTRCVFVGNLGFVDEEAQPADQDGEVKKKKKAAAAADV-EEGLWRTF 363
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
E VE+VRV+R RVGKG AYV FK
Sbjct: 364 NDQCGGEGVVESVRVVRDRLTRVGKGFAYVQFK 396
>gi|157133021|ref|XP_001662743.1| hypothetical protein AaeL_AAEL012618 [Aedes aegypti]
gi|108870976|gb|EAT35201.1| AAEL012618-PA [Aedes aegypti]
Length = 557
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 27/167 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IF+GNLP VKK T+ F ++G+I ++R RS I + +K+ + A +++
Sbjct: 305 SIFIGNLPNTVKKSTMKSLFNQYGKILTIRFRSNDGI--------TLFKKKDRKEAKALN 356
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
YI F+++ +AA A N ++ GN IR+ + + TVFVGN+
Sbjct: 357 CYIRFETKPEAQAACAMNGQLVEGNRIRVTMHMQKQ---------MGHASSTVFVGNINR 407
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
D E+Y F + + +E VR I KGI YV FK V
Sbjct: 408 KTTDNELYDFFSRVGE----IEYVRQI------ADKGIGYVCFKKGV 444
>gi|195483935|ref|XP_002090493.1| GE13151 [Drosophila yakuba]
gi|194176594|gb|EDW90205.1| GE13151 [Drosophila yakuba]
Length = 433
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 19/168 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K+ L+K F +G + S+R+R+ + + + + A S++
Sbjct: 154 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA--------GGKQLFKHKQRKVAGSLN 205
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY--DIKKTVFVGNL 344
AY+V ++ + + AL+ N NH+R+ A +G D D K+T+FVG+L
Sbjct: 206 AYVVLQNPEIAQQALSLNGTEFKENHLRVTPAAKAEGFGQGADQQPSDKDAKRTIFVGSL 265
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E++ ++F CG ++ +R ++ + KG+AYV F+
Sbjct: 266 KYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQ 306
>gi|425771836|gb|EKV10269.1| Nucleolar protein 12 [Penicillium digitatum Pd1]
gi|425777183|gb|EKV15367.1| Nucleolar protein 12 [Penicillium digitatum PHI26]
Length = 526
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 56/210 (26%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKFG----------EIDSVRIRSVPIIDTK-IPR 269
RT+F+GN+ K KKTL++ F +I+S+R RSV IP+
Sbjct: 196 RTVFLGNVSTEAIRSKTAKKTLLRHLTSFCSSLPESTGPHKIESIRFRSVAFASGGGIPK 255
Query: 270 KGAILQKQI-NENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ + ++++ +E S +AY V+ + + +A A N ++ H+R+D P +
Sbjct: 256 RASFAKRELLDETTPSTNAYAVYTTLHAARKAPAALNGTIVLDRHLRVDSLAHPSE---- 311
Query: 328 EDAPLYDIKKTVFVGNL----------------------PFDVKDEEIYQLF---CGLND 362
D K+ VFVGNL P DV +E ++++F G D
Sbjct: 312 -----IDHKRCVFVGNLSFIDSETPEEDEKTGKKKKARAPADV-EEGLWRIFNAHTGGKD 365
Query: 363 ---LESSVEAVRVIRHPHMRVGKGIAYVLF 389
++ +VE VRVIR RVGKG AYV F
Sbjct: 366 KKAIKKNVEFVRVIRDSTTRVGKGFAYVQF 395
>gi|290990600|ref|XP_002677924.1| NOP12_SCHPO nucleolar protein 12-like protein [Naegleria gruberi]
gi|284091534|gb|EFC45180.1| NOP12_SCHPO nucleolar protein 12-like protein [Naegleria gruberi]
Length = 377
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 19/174 (10%)
Query: 227 TIFVGNLP-------LKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIP-RKGAILQKQI 278
TIF+ N P LK KK + K F +GEI+S+R RS+ +KIP RKG +
Sbjct: 165 TIFISNFPIPLEDKNLKKSKKLVTKLFSVYGEIESIRFRSLGFEKSKIPTRKGHLAAGLR 224
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
++ +V+ + + + ++ N V+ G H+ +D A D+ +
Sbjct: 225 TKDYGTVYVHFSEMTAEMSKIISDLNGKVLHGRHLNVDTASHKETSKDENDS-------S 277
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+F+ NLPF++ DEE+++ E + VR++R P KG YV K +
Sbjct: 278 IFIQNLPFEIDDEEVWETIGS----EHEIVRVRIVRDPISGKCKGFGYVQLKDK 327
>gi|400599227|gb|EJP66931.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 561
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 54/208 (25%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+FV N+ K K+ L+ F +++S+R RSV +P++ A
Sbjct: 188 RTVFVSNVSSEAVSSKAAKRQLLAHFATVLDKDASPSQKVESIRFRSVAFSGGSMPKRAA 247
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
+ K + E S +AYIVF + + N + + G HIR+D P +
Sbjct: 248 YITKSVMEATTHSTNAYIVFSTTAAARRVCKELNGSEVLGRHIRVDSVAHP--------S 299
Query: 331 PLYDIKKTVFVGNL-------------------------PFDVKDEEIYQLFCGLNDLES 365
P D ++ +FVGNL P DV +E +++ F +
Sbjct: 300 PT-DHRRCIFVGNLGFVDDETMLNTNKDGEAESKKRNKVPSDV-EEGLWRTFSKIG---- 353
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
VE VRV+R P RVGKG AYV F R+
Sbjct: 354 KVENVRVVRDPKTRVGKGFAYVQFYVRI 381
>gi|156089293|ref|XP_001612053.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154799307|gb|EDO08485.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 344
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 15/169 (8%)
Query: 227 TIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPR--KGAILQKQINENAD 283
+F+GN+PL + K LIK+ I + S+ RS+P+ ++K R + I++ + ++
Sbjct: 117 VVFIGNVPLSLDKSQLIKKLGIDPKIVQSIYFRSLPV-ESKFARNKRVGIIRGKFSDAKS 175
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ +AY+ E+ + LA N I G+++ +++ P ++ KKT+FVG
Sbjct: 176 TQNAYVKLVDEKYVDTLLAKNTMEIDGHYLFINKNSP-------SSFSKFNRKKTIFVGR 228
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
LP + E++ +F + S+V+ VR+IR P KG +V F R
Sbjct: 229 LPKSTTENELFDVFSNV----SAVKGVRIIRDPQTHESKGFGFVAFDER 273
>gi|67521990|ref|XP_659056.1| hypothetical protein AN1452.2 [Aspergillus nidulans FGSC A4]
gi|74598186|sp|Q5BDC8.1|NOP12_EMENI RecName: Full=Nucleolar protein 12
gi|40745426|gb|EAA64582.1| hypothetical protein AN1452.2 [Aspergillus nidulans FGSC A4]
gi|259486763|tpe|CBF84884.1| TPA: Nucleolar protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q5BDC8]
[Aspergillus nidulans FGSC A4]
Length = 520
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 156/357 (43%), Gaps = 102/357 (28%)
Query: 116 LGFEPNGTIEN-EIKKEHSSNVGSES-----YLNRQKQNSNFSVEGKKRSENKKTKKRKR 169
LG P I + E +E SS+ G++S ++ ++ + + E + ++KRKR
Sbjct: 52 LGAAPKTKITDVEKDEEESSSAGNDSASEDQFMEDAPESPDAAEEAVQAVPEPPSRKRKR 111
Query: 170 ---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKA---------------------DNE 205
+D+E+ Y+ + +AKEE+ + +K+++A D E
Sbjct: 112 AAGEDLEESYMRR----LAKEEQKE-----QKKRRAERSSSLEEESEDGEKESPQSEDGE 162
Query: 206 TED----MLVHRKEEGF---DDE-GKLLRTIFVGNLPLKV-----KKKTLIKEFIKF--- 249
+ED + H G DDE K RT+F+GN+ K KK L+K F
Sbjct: 163 SEDEGADIPKHEALAGAANDDDELSKSNRTVFLGNVSTKAITSKSAKKELMKHLSSFLST 222
Query: 250 -------GEIDSVRIRSVPIIDT-KIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEAA 300
+IDS+R RS KIP++ A +++I+++ S +AY V+ + Q+ + A
Sbjct: 223 LPESTGPHKIDSIRFRSTAFASGGKIPKRAAFAKQEIHDDTTPSTNAYAVYSTAQAAKKA 282
Query: 301 LA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL--------------- 344
A N V+ H+R+D P K D K+ VFVGNL
Sbjct: 283 PAALNGTVVLDRHLRVDNVAHPAK---------VDHKRCVFVGNLDFIDNETGTEEGEKK 333
Query: 345 -----PFDVKDEEIYQLFCGLNDLESS-------VEAVRVIRHPHMRVGKGIAYVLF 389
P DV +E +++ F S VE+VRV+R RVGKG AYV F
Sbjct: 334 KKNRPPADV-EEGLWRTFNAHTKASQSGPAGRGNVESVRVVRDRSTRVGKGFAYVQF 389
>gi|380492766|emb|CCF34363.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 470
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 47/204 (23%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPR 269
K RT+F+ N+ K K+TL + +I+S+R RS+ +P+
Sbjct: 185 KASRTVFLSNVASDAIDSKSAKRTLEAHLVSVLDKDATPPQKIESIRFRSIAFSGGALPK 244
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKG 327
+ A + K + NE S +AY+VF + + A N ++ H+R+D P
Sbjct: 245 RAAYITKSLMNETTKSANAYVVFSTPAAARKVCAELNGTIVLDRHLRVDSVAHP------ 298
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQ----------------------LFCGLNDLES 365
AP D ++ VFVGNL F + DE I L+
Sbjct: 299 --APT-DHRRCVFVGNLGF-IDDETILTTNEEGETVQKKRTKVPADIEEGLWRTFGKHAG 354
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLF 389
VE VRV+R P RVGKG AYV F
Sbjct: 355 KVENVRVVRDPKTRVGKGFAYVQF 378
>gi|146331996|gb|ABQ22504.1| RNA-binding protein 34-like protein [Callithrix jacchus]
Length = 220
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 251 EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG- 309
+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK + AL N A I
Sbjct: 1 QIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKDGSAATQALKRNGAQIAD 60
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSV 367
G IR+D A + K++VFVGNLP+ V++ + + F CG S+
Sbjct: 61 GFRIRVDLASATSSR----------DKRSVFVGNLPYKVEESAVEKHFLDCG------SI 104
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
AVR++R +GKG YVLF
Sbjct: 105 MAVRIVRDQVTGIGKGFGYVLF 126
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R++FVGNLP KV++ + K F+ G I +VR I+ ++ G + EN DSV
Sbjct: 78 RSVFVGNLPYKVEESAVEKHFLDCGSIMAVR-----IVRDQVTGIGKGFGYVLFENTDSV 132
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
H AL N + + G +R+ R+ ++KLK P
Sbjct: 133 H------------LALKLNNSELMGRKLRVMRSV-NKEKLKQNSNP 165
>gi|342183672|emb|CCC93152.1| putative RNA binding protein [Trypanosoma congolense IL3000]
Length = 423
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 24/181 (13%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIID-------------TKIPRKGA 272
RT+FVGNL VK++T+ K F G I+S+RIR ++D K+ R
Sbjct: 127 RTVFVGNLVNDVKRRTVEKIFKSCGTIESLRIRGQAVVDEGGVDENGTNARQRKVGRAIH 186
Query: 273 ILQKQINENAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
+L+ + + S AY++FK + S + AL N V+ G HI + P ++
Sbjct: 187 VLRGDVKKGEHYSAVAYVLFKDKSSIQEALKKNGIVVEGRHIVVTTMDPESRE------- 239
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
Y + +VF+GN+ +D +E + F L+ V+ +R++R KG YV F++
Sbjct: 240 -YAPETSVFIGNIAYDTNEEAVRNFFVERGILD--VKRIRLVRDRSTGDCKGFGYVEFES 296
Query: 392 R 392
+
Sbjct: 297 K 297
>gi|429860604|gb|ELA35334.1| nucleolar protein 12 [Colletotrichum gloeosporioides Nara gc5]
Length = 540
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 90/208 (43%), Gaps = 47/208 (22%)
Query: 219 DDEGKLLRTIFVGNLPL-----KVKKKTL--------IKEFIKFGEIDSVRIRSVPIIDT 265
D+ K RT+F+ N+ K K+TL K+ +I+S+R RSV
Sbjct: 175 DEIDKANRTVFLSNVASEAVSNKAAKRTLEAHLTSVLDKDATPAQKIESIRFRSVAFSGG 234
Query: 266 KIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRK 323
+P++ A + K + E S +AY+VF + + +A N V+ H+R+D P
Sbjct: 235 ALPKRAAYITKAVMQETTKSANAYVVFSTPAAARKVVAELNGTVVLERHLRVDSVAHP-- 292
Query: 324 KLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ----------------------LFCGLN 361
+P D ++ VFVGNL F V DE I L+
Sbjct: 293 ------SPT-DHRRCVFVGNLGF-VDDETITTVDEAGETVQRKRTKVPADIEEGLWRTFG 344
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLF 389
VE VRVIR P RVGKG AYV F
Sbjct: 345 KQAGKVENVRVIRDPKTRVGKGFAYVQF 372
>gi|340520494|gb|EGR50730.1| predicted protein [Trichoderma reesei QM6a]
Length = 557
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 52/260 (20%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETED-MLVHR---KEEGFDDEGKLL 225
DD+E+ Y+ K E GK++ E+ AD +++D VH +E + K
Sbjct: 144 DDLEEKYLAKLADDDEPEPSGKRLKGQEE--DADKDSDDEQPVHESLTQESKQSEMEKAA 201
Query: 226 RTIFVGNLPLK-VKKKTLIKEFIKF------------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+GN+ + + K+ KE +K +I+S+R RSV +P++ A
Sbjct: 202 RTVFLGNVATEAISSKSAKKELMKHLASVLDKDASPPEKIESLRFRSVAFSTGSMPKRAA 261
Query: 273 ILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
+ K + + S +AY VF + + +A N + G HIR+D P +
Sbjct: 262 YITKSLMDATTKSTNAYAVFSTPAAVRKVVAELNGTEVLGRHIRVDSVAHP--------S 313
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE---------------------SSVEA 369
P+ + + VFVGNL F V DE + G +E VE
Sbjct: 314 PM-NHRACVFVGNLGF-VDDETVISQKAGGETVEKKRNKVPSDIEEGLWRTFGTQGKVEN 371
Query: 370 VRVIRHPHMRVGKGIAYVLF 389
VRV+R RVGKG AYV F
Sbjct: 372 VRVVRDSKTRVGKGFAYVQF 391
>gi|330906317|ref|XP_003295431.1| hypothetical protein PTT_00922 [Pyrenophora teres f. teres 0-1]
gi|311333292|gb|EFQ96474.1| hypothetical protein PTT_00922 [Pyrenophora teres f. teres 0-1]
Length = 561
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 46/202 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+GN+ + K +K L K F +I+S+R RS + +
Sbjct: 235 KASRTVFLGNVSIECINSKAAEKALKKHLESFIPDLADNTPPHKIESIRFRST-AFGSSL 293
Query: 268 PRKGAILQKQINE-NADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K+I E S +AY V+ ++ + EA N +V+ H+ +D P K
Sbjct: 294 PKRAAFAKKEIMEATTKSTNAYAVYTTKVAAREAVKRLNGSVLLNRHLHVDSVAHPTK-- 351
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG--------LNDLESS----------V 367
D ++ VFVGNLPF V DE G +D+E V
Sbjct: 352 -------VDHRRCVFVGNLPF-VDDESQTPTVEGEKPKSKKPASDIEEGLWLQFAKCGKV 403
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
E+VRV+R RVGKG AYV F
Sbjct: 404 ESVRVVRDAKTRVGKGFAYVQF 425
>gi|261331756|emb|CBH14750.1| DRBD9 [Trypanosoma brucei gambiense DAL972]
Length = 429
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 28/183 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK-------------IPRKGA 272
RT+FVGNL VK++ L K F G I+SVRIR+ + K + R
Sbjct: 132 RTVFVGNLVNDVKRRVLEKVFKTCGPIESVRIRAQALEGEKDLNGGEATVQPKGVGRAIR 191
Query: 273 ILQKQINENAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
+L+ + + S AY++FK + S + AL N V+ G HI + P ++
Sbjct: 192 VLRGDVKKGEQYSAVAYVLFKDKSSIKEALDKNGVVVEGRHIVVTTLDPEGRE------- 244
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFC--GLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
Y + +VFVGN+ +D +E ++ F G+ D V+ VR++R + KG YV F
Sbjct: 245 -YAPETSVFVGNVAYDSNEEALWNFFVEKGIRD----VKRVRLVRDRESGMCKGFGYVEF 299
Query: 390 KTR 392
+++
Sbjct: 300 QSK 302
>gi|71745848|ref|XP_827554.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831719|gb|EAN77224.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 429
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 28/183 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK-------------IPRKGA 272
RT+FVGNL VK++ L K F G I+SVRIR+ + K + R
Sbjct: 132 RTVFVGNLVNDVKRRVLEKVFKTCGPIESVRIRAQALEGEKDLNGGEATVQPRGVGRAIR 191
Query: 273 ILQKQINENAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
+L+ + + S AY++FK + S + AL N V+ G HI + P ++
Sbjct: 192 VLRGDVKKGEQYSAVAYVLFKDKSSIKEALDKNGVVVEGRHIVVTTLDPEGRE------- 244
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFC--GLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
Y + +VFVGN+ +D +E ++ F G+ D V+ VR++R + KG YV F
Sbjct: 245 -YAPETSVFVGNVAYDSNEEALWNFFVEKGIRD----VKRVRLVRDRESGMCKGFGYVEF 299
Query: 390 KTR 392
+++
Sbjct: 300 QSK 302
>gi|189204099|ref|XP_001938385.1| nucleolar protein 12 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985484|gb|EDU50972.1| nucleolar protein 12 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 562
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 46/202 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+GN+ + K +K L K F +I+S+R RS + +
Sbjct: 238 KASRTVFLGNVSIECINSKPAEKALKKHLESFIPDLADNTPPHKIESIRFRST-AFGSSL 296
Query: 268 PRKGAILQKQINE-NADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K+I E S +AY V+ ++ + EA N +V+ H+ +D P K
Sbjct: 297 PKRAAFAKKEIMEATTKSTNAYAVYTTKVAAREAVKRLNGSVLLNRHLHVDSVAHPTK-- 354
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG--------LNDLESS----------V 367
D ++ VFVGNLPF V DE G +D+E V
Sbjct: 355 -------VDHRRCVFVGNLPF-VDDESQTPTVEGDKPKSKKPASDIEEGLWVQFAKCGKV 406
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
E+VRV+R RVGKG AYV F
Sbjct: 407 ESVRVVRDAKTRVGKGFAYVQF 428
>gi|322699077|gb|EFY90842.1| nucleolar protein 12 [Metarhizium acridum CQMa 102]
Length = 548
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 46/203 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEF--------IKFGEIDSVRIRSVPIIDTKIPR 269
K RT+F+ N+ K KK L+ + +++S+R RSV +P+
Sbjct: 203 KASRTVFLANVSTEAISSKAAKKALLTHLSSVLDPQGMPAQKLESIRFRSVAFSTGSMPK 262
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ A + K + S +AY VF + + A N I G HIR+D P
Sbjct: 263 RAAYITKSLMGATTKSANAYAVFSTPAAARLVASKLNGTEILGRHIRVDSVAHP------ 316
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE---------------------SS 366
+P D ++ +FVGNL F V DE + G ++E
Sbjct: 317 --SPT-DHRRCIFVGNLGF-VDDETVVNTNEGGENVEKKRTKVPSDIEEGLWRTFSKTGK 372
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
VE VRV+R P RVGKG AYV F
Sbjct: 373 VENVRVVRDPKTRVGKGFAYVQF 395
>gi|310793454|gb|EFQ28915.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 570
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 47/201 (23%)
Query: 226 RTIFVGNLPL-----KVKKKTL--------IKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ K K+TL K+ +I+S+R RSV +P++ A
Sbjct: 203 RTVFLSNVAADAIDNKSAKRTLEAHLSSVLDKDATPPQKIESIRFRSVAFSGGGLPKRAA 262
Query: 273 ILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
+ K + E S +AY+VF + + A N V+ H+R+D P A
Sbjct: 263 YITKSLMKETTKSANAYVVFSTPAAARKVCAELNGTVVLDRHLRVDSVAHP--------A 314
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ----------------------LFCGLNDLESSVE 368
P D ++ VFVGNL F + DE I L+ VE
Sbjct: 315 PT-DHRRCVFVGNLGF-IDDETIVSTNDEGETVQKKRTKVPADIEEGLWRTFGKHAGKVE 372
Query: 369 AVRVIRHPHMRVGKGIAYVLF 389
VRV+R P RVGKG AYV F
Sbjct: 373 NVRVVRDPKTRVGKGFAYVQF 393
>gi|395849832|ref|XP_003797517.1| PREDICTED: RNA-binding protein 34, partial [Otolemur garnettii]
Length = 406
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 43/182 (23%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK +P T + +K
Sbjct: 174 INQEEERLKNE----RTVFVGNLPITCNKK-------------------IPAEGT-LSKK 209
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK + + AL N I G IR+D A +
Sbjct: 210 LAAIKRKIHPDQKNINAYVVFKDKSAAVKALKRNGTQIADGFRIRVDLASETSSR----- 264
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VFVGNLP+ V++ + + F CG ++ AVR++R +GKG YV
Sbjct: 265 -----DKRSVFVGNLPYKVEESVVEKHFLDCG------NIVAVRIVRDQATGLGKGFGYV 313
Query: 388 LF 389
LF
Sbjct: 314 LF 315
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 24/104 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R++FVGNLP KV++ + K F+ G I +VRI + + A +
Sbjct: 267 RSVFVGNLPYKVEESVVEKHFLDCGNIVAVRI--------------------VRDQATGL 306
Query: 286 ---HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK 326
Y++F++ + AL N + + G +R+ R C ++KLK
Sbjct: 307 GKGFGYVLFENTDAVHLALKLNNSELMGRKLRVMR-CVNKEKLK 349
>gi|154344829|ref|XP_001568356.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065693|emb|CAM43465.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 458
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTK---IPRKGAILQKQINE 280
RTIFVGNLP + K+ + K F G I +VRIR + +D K + R +L+ +I +
Sbjct: 164 RTIFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEKHQNMGRAVRVLRGEIKK 223
Query: 281 NAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+A S AY++F S +S +AL N V HI + ++ Y + ++
Sbjct: 224 DAKYSSTAYVLFDSAESIASALEKNGLVFHNRHIVV--------TTMDVESCAYPPETSI 275
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+GN+ +D +E+++ F G+ D V+ VR++R KG YV F
Sbjct: 276 FLGNVAYDTTEEDVWNFFQEHGIRD----VKRVRLVRDRETGDCKGFGYVEF 323
>gi|169623947|ref|XP_001805380.1| hypothetical protein SNOG_15221 [Phaeosphaeria nodorum SN15]
gi|160705083|gb|EAT77446.2| hypothetical protein SNOG_15221 [Phaeosphaeria nodorum SN15]
Length = 504
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 49/200 (24%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKIPRK 270
RT+F+GN+ K +K L K F +++S+R RS+ + T P++
Sbjct: 188 RTVFLGNVSSECINSKSTEKALKKHLESFIADLADNNPPHKVESIRYRSIRLSITACPKR 247
Query: 271 GAILQKQINENAD-SVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
A +K+I ++ S +AY V+ + + EA N +V H+ +D P K
Sbjct: 248 AAFAKKEIKDSTTRSTNAYAVYTTTTAAREAVKRLNGSVFLKRHMHVDSVAHPTK----- 302
Query: 329 DAPLYDIKKTVFVGNLPF------------DVK-------DEEIYQLFCGLNDLESSVEA 369
D ++ VFVGNLPF +VK +E ++ F +ES
Sbjct: 303 ----IDHRRCVFVGNLPFVDDRSQVPTAEGEVKKKPSSDVEEGLWTHFASAGKIES---- 354
Query: 370 VRVIRHPHMRVGKGIAYVLF 389
VRV+R RVGKG AYV F
Sbjct: 355 VRVVRDAATRVGKGFAYVQF 374
>gi|145340686|ref|XP_001415451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575674|gb|ABO93743.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 225
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 310 GNHIRLDRACPP---RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG---LNDL 363
G HIR+D A P R ++ +YD ++VF+G+LPF+V DE++ +LF DL
Sbjct: 6 GRHIRVDLASKPSIIRSEV------VYDHTRSVFLGHLPFNVDDEDVIRLFNKNKEYPDL 59
Query: 364 ESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
SVEAVRV+R +GKGI +VLFKT
Sbjct: 60 RKSVEAVRVVRDRKTTMGKGIGFVLFKT 87
>gi|323454063|gb|EGB09934.1| hypothetical protein AURANDRAFT_71254 [Aureococcus anophagefferens]
Length = 446
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 41/198 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG-------AILQKQI 278
RT+FVGN+P + KK L F FG + +VR RS+P K+ G QK +
Sbjct: 119 RTVFVGNVPTEATKKQLRTFFKTFGAVATVRTRSLPTAGVKVDDAGNDALVKRVCAQKHL 178
Query: 279 NENAD-SVHAYIVFKSEQSTEAALAFNMAVIGGN----------------------HIRL 315
+A ++HAY+VF++ + A + H+R+
Sbjct: 179 LSDAKRTMHAYVVFETADAAAEAARAANGAVWPGPAAGAAGAEAAAYVAGEAPEVFHLRV 238
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG-LNDL--ESSVEAVRV 372
D A R +DA L +T FVGN P D+ +E + LF L +L +++ VRV
Sbjct: 239 DLASGARD----DDAHL----RTAFVGNAPRDLTEEGLRSLFAAHLAELGGHGAIDNVRV 290
Query: 373 IRHPHMRVGKGIAYVLFK 390
+R + G+AYV+ +
Sbjct: 291 VRRKEDHLCIGVAYVMLR 308
>gi|452001527|gb|EMD93986.1| hypothetical protein COCHEDRAFT_1201816 [Cochliobolus
heterostrophus C5]
Length = 560
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 46/202 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K +KTL K F +I+S+R RS + +
Sbjct: 235 KAARTVFLSNVSTECINSKSAEKTLKKHLESFIADLADNNPPHKIESIRFRST-AFGSSL 293
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K I + S +AY V+ ++ + EA N +V+ H+ +D P K
Sbjct: 294 PKRAAFAKKDIMDATTKSTNAYAVYTTKVAAREAVKRLNGSVLLNRHLHVDSVAHPAK-- 351
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG--------LNDLE----------SSV 367
D ++ VFVGNLPF V DE + G +D+E ++
Sbjct: 352 -------VDHRRCVFVGNLPF-VDDESQMPVAEGEKPKKNKPSSDVEEGLWVHLSKCGTI 403
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
E+VRV+R RVGKG AYV F
Sbjct: 404 ESVRVVRDAKTRVGKGFAYVQF 425
>gi|358391644|gb|EHK41048.1| hypothetical protein TRIATDRAFT_130480 [Trichoderma atroviride IMI
206040]
Length = 546
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 114/263 (43%), Gaps = 53/263 (20%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKV-GVGEKRKKADNET---EDMLVHR---KEEGFDDEG 222
DD+E+ Y+ K E GK+ G GE K+ +E + + VH +E +
Sbjct: 134 DDLEEKYLAKLADDDESEPSGKRQKGEGEDAKEGASEEEEEDAVPVHESLTQESKQSETE 193
Query: 223 KLLRTIFVGNLPLK-VKKKTLIKEFIKF------------GEIDSVRIRSVPIIDTKIPR 269
K RT+F+GN+ + + K+ KE +K +I+S+R RSV +P+
Sbjct: 194 KATRTVFLGNVATEAISSKSAKKELMKHLASVLDKDASPPQKIESLRFRSVAFSAGSMPK 253
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKG 327
+ A + K + + S +AY VF + +A N I G HIR+D P
Sbjct: 254 RAAYITKALMDATTKSTNAYAVFSDPAAARKVVAELNGTEILGRHIRVDSVAHP------ 307
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE---------------------SS 366
+P+ + + VFVGNL F V DE + + +E
Sbjct: 308 --SPM-NHRSCVFVGNLGF-VDDETVLNRQADGDTVEKKRNKVPSDIEEGLWRTFGTKGK 363
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
VE VRVIR RVGKG AYV F
Sbjct: 364 VENVRVIRDSKTRVGKGFAYVQF 386
>gi|322708946|gb|EFZ00523.1| nucleolar protein 12 [Metarhizium anisopliae ARSEF 23]
Length = 548
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 88/203 (43%), Gaps = 46/203 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEF--------IKFGEIDSVRIRSVPIIDTKIPR 269
K RT+F+ N+ K KKTL+ + +++S+R RSV +P+
Sbjct: 203 KASRTVFLANVSTEAISSKAAKKTLLTHLSSVLDPHGMPVQKLESIRFRSVAFSTGSMPK 262
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ A + K + S +AY VF + + A N + G HIR+D P
Sbjct: 263 RAAYITKSLMGATTKSTNAYAVFSTPAAARLVASKLNGTEVLGRHIRVDSVAHP------ 316
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC-GLN----------DLESS---------- 366
+P D ++ +FVGNL F V DE + G N D+E
Sbjct: 317 --SPT-DHRRCIFVGNLGF-VDDETVVNTTKEGENVEKKRTKVPSDIEEGLWRTFSKTGK 372
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
VE VRV+R P RVGKG AYV F
Sbjct: 373 VENVRVVRDPTTRVGKGFAYVQF 395
>gi|406859534|gb|EKD12598.1| nucleolar protein 12 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 593
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 91/205 (44%), Gaps = 49/205 (23%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF------------GEIDSVRIRSVPIIDT 265
K RT+F+ N+ K KKTL+ F +I+S+R RS T
Sbjct: 234 KASRTVFLANVSTLAMTDKAAKKTLLGHMGSFLSSLAPLAGKPEHKIESLRFRSTAYAGT 293
Query: 266 KIPRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRK 323
+P+K A +K + S +AY+V+ + + EA N ++ H+R+D P K
Sbjct: 294 ALPKKAAFAKKDLMAATTKSTNAYVVYSTAFAAREAVKKLNGTMVLDRHLRVDGVAHPAK 353
Query: 324 KLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN---------DLE---------- 364
D ++ VFVGNL F V DE + + G N D+E
Sbjct: 354 ---------TDHRRCVFVGNLGF-VDDESMMEQ-GGDNERKRSKIPSDIEEGLWRQFGKV 402
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF 389
+VE+VRV+R RVGKG AYV F
Sbjct: 403 GTVESVRVVRDEKTRVGKGFAYVQF 427
>gi|358372752|dbj|GAA89354.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 519
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 59/226 (26%)
Query: 212 HRKEEGFDDEGKLL----RTIFVGNLPL-----KVKKKTLIKEFIKF----------GEI 252
H + G D E K L RT+F+GN+ K KKTL+K F ++
Sbjct: 173 HESQTG-DAESKELDKSNRTVFLGNVSSEAIKSKSAKKTLLKHLGSFLSTLPESTGPHKV 231
Query: 253 DSVRIRSVPIIDTK-IPRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIG 309
+S+R RS +P++ + ++++ ++ +AY V+ + Q+ +A A N VI
Sbjct: 232 ESIRFRSTAFASGGGVPKRASFAKQEVLDDTTPCTNAYAVYSTVQAARKAPAALNGTVIL 291
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL-------------------PFDVKD 350
H+R+D P AP+ D K+ VFVGNL P DV +
Sbjct: 292 DRHLRVDSVAHP--------API-DHKRCVFVGNLDFVDNEVKPDDEQKKKKRAPADV-E 341
Query: 351 EEIYQLF---CGLNDLE----SSVEAVRVIRHPHMRVGKGIAYVLF 389
E +++ F G ++ + +VE+VRV+R RVGKG AYV F
Sbjct: 342 EGLWRTFNAHTGRSNKDKPKNGNVESVRVVRDSLTRVGKGFAYVQF 387
>gi|154308958|ref|XP_001553814.1| hypothetical protein BC1G_08007 [Botryotinia fuckeliana B05.10]
gi|347838569|emb|CCD53141.1| hypothetical protein [Botryotinia fuckeliana]
Length = 614
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 88/206 (42%), Gaps = 50/206 (24%)
Query: 223 KLLRTIFVGN-----LPLKVKKKTLIKEFIKF-------------GEIDSVRIRSVPIID 264
K RTIF+GN + K KK L+ F +++S+R RS
Sbjct: 253 KASRTIFLGNVASSTISSKADKKILMSHLSSFIDDLPPPPAGKPSHKLESLRFRSTAYAT 312
Query: 265 TKIPRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPR 322
+P+K A +K I S +AY V+ + + EA N ++ H+R+D P
Sbjct: 313 AALPKKAAFAKKDIMTATTKSTNAYAVYSTAFAAREAVKKLNGTIVLDRHLRVDGVAHPA 372
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN---------DLESS------- 366
K D ++ VFVGNL F V DE + + G N D+E
Sbjct: 373 K---------TDHRRCVFVGNLGF-VDDESLLEQ-DGENSRKRSKIPSDIEEGLWRQFGK 421
Query: 367 ---VEAVRVIRHPHMRVGKGIAYVLF 389
VE+VRVIR RVGKG AYV F
Sbjct: 422 AGEVESVRVIRDEKTRVGKGFAYVQF 447
>gi|302506797|ref|XP_003015355.1| RNA binding protein, putative [Arthroderma benhamiae CBS 112371]
gi|291178927|gb|EFE34715.1| RNA binding protein, putative [Arthroderma benhamiae CBS 112371]
Length = 552
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 55/213 (25%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFG---------------EIDSVRIRSVPI 262
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 195 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPSSSSPTTPSTTHKIESLRFRSTAF 254
Query: 263 IDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
T +PR+ A +K++ + +AY+V+ + + + AL N ++ HIR+D P
Sbjct: 255 SSTALPRRAAYAKKELMDSTTKGTNAYVVYSTALAAKKALKLNGTIVLDRHIRVDSVSKP 314
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQLF 357
AP+ D + VFVGNL F DV +E +++ F
Sbjct: 315 --------APV-DHTRCVFVGNLGFVDEEAQPADQDGEVKKKKKAAAAADV-EEGLWRTF 364
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
E VE+VRV+R RVGKG AYV FK
Sbjct: 365 NDQCGGEGVVESVRVVRDRLTRVGKGFAYVQFK 397
>gi|212541320|ref|XP_002150815.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210068114|gb|EEA22206.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 540
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 56/211 (26%)
Query: 226 RTIFVGN-----LPLKVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTK-IPR 269
RT+F+GN + K KK L+ F +I+S+R RS K +PR
Sbjct: 207 RTVFLGNVSNSAITSKSDKKALLAHLSSFLSKLPKSDTAHKIESIRFRSTAYGTEKGVPR 266
Query: 270 KGAILQKQ-INENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ A K+ ++ S +AY+V+ + + + A A N V+ G H+R+D P
Sbjct: 267 RAAFAHKETMDSTTLSTNAYVVYSTPIAAQKAPGALNGTVVLGRHLRVDNVAHP------ 320
Query: 328 EDAPLYDIKKTVFVGNLPF-----DVKDEE-----------------IYQLF---CGL-- 360
D K+ VFVGNL F D D+E +++ F G+
Sbjct: 321 ---AAIDNKRCVFVGNLDFVGQEKDENDDEETPKKKKNSPPADVEEGLWRTFNANTGVAG 377
Query: 361 --NDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
N +VE+VRV+R RVGKG AYV F
Sbjct: 378 KKNAGGGNVESVRVVRDQATRVGKGFAYVQF 408
>gi|451849708|gb|EMD63011.1| hypothetical protein COCSADRAFT_119937 [Cochliobolus sativus
ND90Pr]
Length = 555
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 46/202 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K +KTL K F +I+S+R RS + +
Sbjct: 230 KAARTVFLSNVSTECINSKSAEKTLKKHLESFIADLADNNPPHKIESIRFRST-AFGSSL 288
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K I + S +AY V+ ++ + EA N +V+ H+ +D P K
Sbjct: 289 PKRAAFAKKDIMDATTKSTNAYAVYTTKVAAREAVKRLNGSVLLNRHLHVDSVAHPAK-- 346
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG--------LNDLE----------SSV 367
D ++ VFVGNLPF V DE + G +D+E ++
Sbjct: 347 -------VDHRRCVFVGNLPF-VDDESQMPVAEGEKPKKNKPSSDVEEGLWVHLSKCGTI 398
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
E+VRV+R RVGKG AYV F
Sbjct: 399 ESVRVVRDAKTRVGKGFAYVQF 420
>gi|401429538|ref|XP_003879251.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495501|emb|CBZ30806.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 455
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 32/178 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTK---IPRKGAILQKQINE 280
RT+FVGNLP + K+ + K F G I +VRIR + +D K + R +L+ +I +
Sbjct: 161 RTVFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEKHQNMGRAVRVLRGEIKK 220
Query: 281 NAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL------DRACPPRKKLKGEDAPLY 333
+A S AY++F S +S +AL N V H+ + RA PP
Sbjct: 221 DAKYSATAYVLFDSAKSIASALEKNGLVFHSRHLVVTTMDVESRAYPP------------ 268
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ ++F+GN+ ++ +E+++ F G+ D V+ VR++R KG YV F
Sbjct: 269 --ETSIFLGNVAYNTTEEDVWSFFQEHGIAD----VKRVRLVRDRETGDCKGFGYVEF 320
>gi|170034332|ref|XP_001845028.1| RNA-binding protein 34 [Culex quinquefasciatus]
gi|167875661|gb|EDS39044.1| RNA-binding protein 34 [Culex quinquefasciatus]
Length = 468
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 27/167 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IFVGNLP +KK + K F+ +G I ++R R+ + ++ +K+ + A S+
Sbjct: 215 SIFVGNLPTAIKKGAIKKLFMPYGRILTIRFRTSDGV--------SLFKKKDRKEAKSLI 266
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F +++ + AA A N ++ N IR+ L I TVFVGN+
Sbjct: 267 CYVRFTTKEESIAACAMNGQMVEENRIRVSLQTQKH---------LGHIASTVFVGNISR 317
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
D E+Y F + + +E VR I KGI YV FK V
Sbjct: 318 KTTDNELYDFFGQVGE----IEYVRQISD------KGIGYVCFKKGV 354
>gi|327305109|ref|XP_003237246.1| nucleolar protein 12 [Trichophyton rubrum CBS 118892]
gi|326460244|gb|EGD85697.1| nucleolar protein 12 [Trichophyton rubrum CBS 118892]
Length = 538
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 95/216 (43%), Gaps = 61/216 (28%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFG---------------EIDSVRIRSVPI 262
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 182 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPSSSSTTTLSTTHKIESLRFRSTAF 241
Query: 263 IDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
T +PR+ A +K++ + +AY+V+ + + + AL N ++ HIR+D P
Sbjct: 242 SSTALPRRAAYAKKELMDSTTKGTNAYVVYSTALAAKKALKLNGTMVLDRHIRVDSVSKP 301
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQLF 357
AP+ D + VFVGNL F DV +E +++ F
Sbjct: 302 --------APV-DHTRCVFVGNLGFVDEETQPAEQDGEVKKKKKAAAAADV-EEGLWRTF 351
Query: 358 ---CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
CG E VE+VRV+R RVGKG AYV FK
Sbjct: 352 NDHCGG---EGVVESVRVVRDRLTRVGKGFAYVQFK 384
>gi|367052169|ref|XP_003656463.1| hypothetical protein THITE_2121111 [Thielavia terrestris NRRL 8126]
gi|347003728|gb|AEO70127.1| hypothetical protein THITE_2121111 [Thielavia terrestris NRRL 8126]
Length = 609
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 57/269 (21%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNET---EDMLVHRKEEGFDDE 221
K+RK D EK + G +++E + +++ E+ + + E E + E +
Sbjct: 166 KRRKADATEKTAAAEDAGGVSREGDDERMAGMEEDESSVGEVPVHESLTTGPVETELE-- 223
Query: 222 GKLLRTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIP 268
K RT+F+ N+ ++ KK L+ ++ S+R RS+ T IP
Sbjct: 224 -KANRTVFLSNVSIEAITSRKAKKILLHHLSSVLDKKADPPQKVQSIRFRSIAFATTGIP 282
Query: 269 RKGAILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLK 326
++ A ++K + E S +AY+V+ + + A+A N V+ H+R+D P
Sbjct: 283 KRVAYIKKSLLEATTKSTNAYVVYSTAAAARLAVAQLNGTVVLDRHLRVDSVAHP----- 337
Query: 327 GEDAPLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGL 360
AP+ D ++ VFVGNL F V DE +Y L+
Sbjct: 338 ---APV-DHRRCVFVGNLGF-VDDETVYSTKIDKEGKEITEKRKRTKTPMDVEEGLWRVF 392
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ VE+VRV+R RVGKG AYV F
Sbjct: 393 GEEAGKVESVRVVRDAATRVGKGFAYVQF 421
>gi|242799056|ref|XP_002483297.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218716642|gb|EED16063.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 536
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 58/212 (27%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF----------GEIDSVRIRSVPI-IDTKIPR 269
RT+F+GN+ K KK L+ F +I+S+R RS +PR
Sbjct: 204 RTVFLGNVSNKAITSKSDKKALLAHISSFLPSLPKSHTPHKIESIRFRSTAYGTQQGVPR 263
Query: 270 KGAILQKQ-INENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ A K+ ++ S +AY+VF + + + A A N V+ G H+R+D P
Sbjct: 264 RAAYAHKETMDSTTLSTNAYVVFSTSIAAQKAPGALNGTVVLGRHLRVDNIAHPA----- 318
Query: 328 EDAPLYDIKKTVFVGNL-----------------------PFDVKDEEIYQLF---CGL- 360
D K+ VFVGNL P DV +E +++ F G+
Sbjct: 319 ----AIDNKRCVFVGNLDFVGQENDAEGDEENPKKKKNTPPADV-EEGLWRTFNANTGVA 373
Query: 361 ---NDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
N +VE+VRV+R RVGKG AYV F
Sbjct: 374 EKKNAAGGNVESVRVVRDQATRVGKGFAYVQF 405
>gi|315046214|ref|XP_003172482.1| nucleolar protein 12 [Arthroderma gypseum CBS 118893]
gi|311342868|gb|EFR02071.1| nucleolar protein 12 [Arthroderma gypseum CBS 118893]
Length = 540
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 60/213 (28%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF-------------GEIDSVRIRSVPIIDTKI 267
RT+F+ N+ K KKTL+ +I+S+R RS T +
Sbjct: 190 RTLFLSNVSTEAIKSKSAKKTLLNHLSSLLPKPSSTDTPSPIHKIESLRFRSTAFSSTAL 249
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK 326
PR+ A +K++ + + Y+V+ + + + AL N ++ HIR+D P
Sbjct: 250 PRRAAYAKKELMDSTTKGTNVYVVYSTVLAAKKALKLNGTMVLDRHIRVDSVSKP----- 304
Query: 327 GEDAPLYDIKKTVFVGNLPF--------------DVK------------DEEIYQLF--- 357
+P D + VFVGNL F +VK +E +++ F
Sbjct: 305 ---SPT-DHTRCVFVGNLGFVDEETQPAPDEGDGEVKKKAKKGSEAGDVEEGLWRTFNER 360
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
CG E VE+VRV+R RVGKG AYV FK
Sbjct: 361 CGG---EGVVESVRVVRDRLTRVGKGFAYVQFK 390
>gi|344247222|gb|EGW03326.1| RNA-binding protein 34 [Cricetulus griseus]
Length = 285
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+I+SVR RSV + + +K A ++++ + + S+
Sbjct: 183 RTVFVGNLPVTCNKKKLKSLFKEYGQIESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 242
Query: 286 HAYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRAC 319
+AY+VFK E + AL N A I G IR+D A
Sbjct: 243 NAYVVFKDESAATKALQRNGAQIEEGFRIRVDLAS 277
>gi|226290935|gb|EEH46363.1| nucleolar protein [Paracoccidioides brasiliensis Pb18]
Length = 611
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 74/231 (32%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K KK L+K F +I+S+R RS +
Sbjct: 223 KTARTVFLSNVSTEAIKSKTAKKALLKHLSSFFPSLPDSTTPHKIESIRFRSTAFSTNAM 282
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A ++++ + S +AY+V+ + + A A N + + H+R+D P
Sbjct: 283 PKRAAYAKRELMDSTTRSTNAYVVYTTTAAARRAPKALNGSFVLDRHLRVDSVAHP---- 338
Query: 326 KGEDAPLYDIKKTVFVGNL-----------------------PFDVKDEEIYQLF----- 357
+P+ D K+ +FVGNL P DV +E +++ F
Sbjct: 339 ----SPI-DYKRCIFVGNLGFVDEETPTDEKVEQQTKKKNTQPADV-EEGLWRTFNEHTR 392
Query: 358 CGLNDLESS-------------------VEAVRVIRHPHMRVGKGIAYVLF 389
+ L S VE+VRVIR P R+GKGIAYV F
Sbjct: 393 SAIAKLSKSPAKSKGSDASNTNNPAIGTVESVRVIRDPATRIGKGIAYVQF 443
>gi|326477104|gb|EGE01114.1| nucleolar protein 12 [Trichophyton equinum CBS 127.97]
Length = 516
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 56/214 (26%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------------GEIDSVRIRSVP 261
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 157 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPTSSSSTTTPSTTHKIESLRFRSTA 216
Query: 262 IIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
T +PR+ A +K + + +AY+V+ + + + AL N ++ HIR+D
Sbjct: 217 FSSTAVPRRAAYAKKDLMDSTTKGTNAYVVYSTALAAKKALKLNGTMVLDRHIRVDSVSK 276
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQL 356
P AP+ D + VFVGNL F DV +E +++
Sbjct: 277 P--------APV-DHTRCVFVGNLGFVDEETQPAEQDGEVKKKKKAAAAADV-EEGLWRT 326
Query: 357 FCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
F E VE+VRV+R RVGKG AYV FK
Sbjct: 327 FNDQCGGEGVVESVRVVRDRLTRVGKGFAYVQFK 360
>gi|145253298|ref|XP_001398162.1| nucleolar protein 12 [Aspergillus niger CBS 513.88]
gi|134083724|emb|CAK42963.1| unnamed protein product [Aspergillus niger]
Length = 521
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 60/227 (26%)
Query: 212 HRKEEGFDDEGKLL----RTIFVGNLPL-----KVKKKTLIKEFIKF----------GEI 252
H + G D E K L RT+F+GN+ K KKTL+K F ++
Sbjct: 174 HESQTG-DAESKELDKSNRTVFLGNVSSEAIKSKSAKKTLLKHLASFLSTLPESTGPHKV 232
Query: 253 DSVRIRSVPIIDTK-IPRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIG 309
+S+R RS +P++ + ++++ ++ +AY V+ + Q+ +A A N V+
Sbjct: 233 ESIRFRSTAFASGGGVPKRASFAKQEVLDDTTPCTNAYAVYSTVQAARKAPAALNGTVVL 292
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL--------------------PFDVK 349
H+R+D P +P+ D K+ VFVGNL P DV
Sbjct: 293 DRHLRVDSVAHP--------SPI-DHKRCVFVGNLDFVDNEVKPDDEQKKKKKRAPADV- 342
Query: 350 DEEIYQLF---CGLNDLE----SSVEAVRVIRHPHMRVGKGIAYVLF 389
+E +++ F G ++ + +VE+VRV+R RVGKG AYV F
Sbjct: 343 EEGLWRTFNAHTGRSNKDKPKNGNVESVRVVRDSLTRVGKGFAYVQF 389
>gi|389594851|ref|XP_003722648.1| putative RNA binding protein [Leishmania major strain Friedlin]
gi|323363876|emb|CBZ12882.1| putative RNA binding protein [Leishmania major strain Friedlin]
Length = 455
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 32/178 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTK---IPRKGAILQKQINE 280
RT+FVGNLP + K+ + K F G I +VRIR + +D + + R +L+ +I +
Sbjct: 161 RTVFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEQHQNMGRAVRVLRGEIKK 220
Query: 281 NAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL------DRACPPRKKLKGEDAPLY 333
+A S AY++F S +S +AL N + HI + RA PP
Sbjct: 221 DAKYSATAYVLFDSAKSIASALEKNGLIFHNRHIVVTTMDVESRAYPP------------ 268
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ ++F+GN+ ++ +E+++ F G+ D V+ VR++R KG YV F
Sbjct: 269 --ETSIFLGNVAYNTTEEDVWSFFQEHGIAD----VKRVRLVRDRETGDCKGFGYVEF 320
>gi|225679223|gb|EEH17507.1| nucleolar protein [Paracoccidioides brasiliensis Pb03]
Length = 611
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 74/231 (32%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K KK L+K F +I+S+R RS +
Sbjct: 223 KTARTVFLSNVSTEAIKSKTAKKALLKHLSSFFPSLPDSTTPHKIESIRFRSTAFSTNAM 282
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A ++++ + S +AY+V+ + + A A N + + H+R+D P
Sbjct: 283 PKRAAYAKRELMDSTTRSTNAYVVYTTTAAARRAPKALNGSFVLDRHLRVDSVAHP---- 338
Query: 326 KGEDAPLYDIKKTVFVGNL-----------------------PFDVKDEEIYQLF----- 357
+P+ D K+ +FVGNL P DV +E +++ F
Sbjct: 339 ----SPI-DYKRCIFVGNLGFVDEETPTDEKVEQQTKKKNTQPADV-EEGLWRTFNEHTR 392
Query: 358 CGLNDLESS-------------------VEAVRVIRHPHMRVGKGIAYVLF 389
+ L S VE+VRVIR P R+GKGIAYV F
Sbjct: 393 SAIAKLSKSPAKSKGSDASNTNNPAIGTVESVRVIRDPATRIGKGIAYVQF 443
>gi|326472030|gb|EGD96039.1| nucleolar protein 12 [Trichophyton tonsurans CBS 112818]
Length = 553
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 56/214 (26%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFG----------------EIDSVRIRSVP 261
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 194 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPSSSSSTTTPSTTHKIESLRFRSTA 253
Query: 262 IIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
T +PR+ A +K + + +AY+V+ + + + AL N ++ HIR+D
Sbjct: 254 FSSTAVPRRAAYAKKDLMDSTTKGTNAYVVYSTALAAKKALKLNGTMVLDRHIRVDSVSK 313
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQL 356
P AP+ D + VFVGNL F DV +E +++
Sbjct: 314 P--------APV-DHTRCVFVGNLGFVDEETQPAEQDGEVKKKKKAAAAADV-EEGLWRT 363
Query: 357 FCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
F E VE+VRV+R RVGKG AYV FK
Sbjct: 364 FNDQCGGEGVVESVRVVRDRLTRVGKGFAYVQFK 397
>gi|378733246|gb|EHY59705.1| hypothetical protein HMPREF1120_07688 [Exophiala dermatitidis
NIH/UT8656]
Length = 392
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 54/207 (26%)
Query: 226 RTIFVGN-----LPLKVKKKTLIKEF----------IKFGEIDSVRIRSVPIIDTKIPRK 270
RT+F+GN + LK KK L + + G+++S+R RS P+K
Sbjct: 85 RTVFLGNVSTDAIKLKRAKKILSRHLRSALKTPAQGPRLGKLESLRFRSTAYHSDAGPKK 144
Query: 271 GAILQKQI-NENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
+K++ +E S +AY VF +E++ + A N +V+ H+R+D P +
Sbjct: 145 ATFAKKELMDETTPSTNAYAVFTTEEAAKHVAKKLNGSVVLDRHLRVDYMGKPAE----- 199
Query: 329 DAPLYDIKKTVFVGNLPFDVKD------------------------EEIYQLFCGLNDLE 364
D ++ +FVGNL F K+ E +++ F +
Sbjct: 200 ----IDHRRCIFVGNLSFVSKETAGNDEDDEAKRRRAAAKEPADPEEGLWRTFSKVG--- 252
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLFKT 391
VE+VRV+R RV KGIAYV F++
Sbjct: 253 -KVESVRVVRDQETRVSKGIAYVQFES 278
>gi|84997495|ref|XP_953469.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304465|emb|CAI76844.1| hypothetical protein, conserved [Theileria annulata]
Length = 346
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 225 LRTIFVGNLPLKVKKKT-LIKEF-IKFGEIDSVRIRSVPIIDTKIPR--KGAILQKQINE 280
L +F+GN+PL +K K+ L+K+ I I SV RS+PI D K R K +++++ ++
Sbjct: 105 LGFVFIGNVPLTIKDKSDLVKKLKINPKIIQSVHFRSLPI-DPKYARNKKVGVIKEKFSD 163
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
D+ +AYI + L N + G+H+ ++ + + + KKTVF
Sbjct: 164 AKDNQNAYIKLSDPKYLNELLEKNTLEVDGHHLFINTS-------DKDSFSKFSRKKTVF 216
Query: 341 VGNLPFDVKDEEIYQLFCGLNDL------ESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
VG LP ++++Y +F ++ + E AVR++R P KG +V F R
Sbjct: 217 VGRLPPTATEDDLYNIFMNISPVKGKQSNEFKFSAVRIVRDPVTMKSKGFGFVEFDNR 274
>gi|320586227|gb|EFW98906.1| nucleolar protein 12 [Grosmannia clavigera kw1407]
Length = 530
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 43/174 (24%)
Query: 249 FGEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMA 306
++S+R RSVP +P++ A + K + A + +AY V+ + + A+ N
Sbjct: 203 LATVESLRFRSVPFATAAMPKRAAFITKAVMGATAQATNAYAVYSTAAAARQAVRQLNGT 262
Query: 307 VIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIY------------ 354
V+ G H+R D P D ++ VFVGNL F + DEE+
Sbjct: 263 VVLGRHLRADSVAHPAA---------VDHRRCVFVGNLGF-MDDEEVMVTPDEAKTDEDG 312
Query: 355 -------------------QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
L+ +VE+VRV+R P RVGKG AYV F
Sbjct: 313 QPAEPTKRKRFKVPMDVEEGLWRTFGKHAGAVESVRVVRDPATRVGKGFAYVQF 366
>gi|357617310|gb|EHJ70713.1| hypothetical protein KGM_00562 [Danaus plexippus]
Length = 514
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 219 DDEGKLLRTIFVGNLPLKVK-KKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ 277
D E ++ RTIFVGN+P K KK L K F ++G+I++VRIR+VP+ D ++ K A+++ +
Sbjct: 431 DTEDEIQRTIFVGNVPFSTKCKKELKKIFNQYGQIETVRIRTVPVKDARVTPKMAVIKNE 490
Query: 278 INENADSVHAYIVF 291
++ + +V+AYI F
Sbjct: 491 LHPDRTTVNAYIKF 504
>gi|440632842|gb|ELR02761.1| hypothetical protein GMDG_05705 [Geomyces destructans 20631-21]
Length = 590
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 90/205 (43%), Gaps = 47/205 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF-------------GEIDSVRIRSVPIID 264
K RT+F+ N+ K KKTL+ F +++S+R RS +
Sbjct: 226 KAARTVFLANVSTNAITDKKAKKTLMDHMGSFIDDLPPPLDGSPKPKVESIRFRST-AYE 284
Query: 265 TKIPRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPR 322
+ +P+K + K + S +AY+V+ S + EAA N V+ H+R+D P
Sbjct: 285 STLPKKASFATKALMAATTKSTNAYVVYTSSFAAREAAKRLNSTVVLDRHLRVDGVAHPA 344
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPF-------DVKDEEIYQLFCGLNDLESS--------- 366
K D ++ VFVGNL F D DE + +D+E
Sbjct: 345 K---------TDHRRCVFVGNLGFVDDESMMDEGDETQRKRSKIPSDIEEGLWRQFGKAG 395
Query: 367 -VEAVRVIRHPHMRVGKGIAYVLFK 390
VE+VRV+R RVGKG AYV FK
Sbjct: 396 EVESVRVVRDEKTRVGKGFAYVQFK 420
>gi|350633199|gb|EHA21565.1| hypothetical protein ASPNIDRAFT_214483 [Aspergillus niger ATCC
1015]
Length = 515
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 82/300 (27%)
Query: 161 NKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLV--------- 211
++K K+ +DVE Y+ + KE+E ++ +++K D E E+
Sbjct: 95 SRKRKRTTAEDVEDTYMRRIAKEQKKEDEKRREEKAKRQKTVDGEQEEDAEQSEEEDDDE 154
Query: 212 --------------HRKEEGFDDEGKLL----RTIFVGNLP-----LKVKKKTLIKEFIK 248
H + G D E K L RT+F+GN+ K KKTL+K
Sbjct: 155 ESSEEDEEKKAVPKHESQTG-DAESKELDKSNRTVFLGNVSSEAIKSKSAKKTLLKHLAS 213
Query: 249 F----------GEIDSVRIRSVPIID-TKIPRKGAILQKQI-NENADSVHAYIVFKSEQS 296
F +++S+R RS +P++ + ++++ ++ +AY V+ + Q+
Sbjct: 214 FLSTLPESTGPHKVESIRFRSTAFASGGGVPKRASFAKQEVLDDTTPCTNAYAVYSTVQA 273
Query: 297 T-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL----------- 344
+A A N V+ H+R+D P +P+ D K+ VFVGNL
Sbjct: 274 ARKAPAALNGTVVLDRHLRVDSVAHP--------SPI-DHKRCVFVGNLDFVDNEVKPDD 324
Query: 345 --------PFDVKDEEIYQLF---CGLNDLE----SSVEAVRVIRHPHMRVGKGIAYVLF 389
P DV +E +++ F G ++ E +VE+VRV+R RVGKG AYV F
Sbjct: 325 EQKKKKRAPADV-EEGLWRTFNAHTGRSNKEKPKNGNVESVRVVRDSLTRVGKGFAYVQF 383
>gi|221053933|ref|XP_002261714.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808174|emb|CAQ38877.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 399
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 18/184 (9%)
Query: 213 RKEEGFDDEGKLLRTIFVGNLPLK--VKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
R ++ E K RT+FVGNLPLK K K L +K ++SVR RS P+ + RK
Sbjct: 135 RHKDRVSQEDKDKRTVFVGNLPLKDMHKGKLLKLLDLKNSAVESVRFRSQPMEEAYAGRK 194
Query: 271 --GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
G IL K+ + D+ +A I K E+S L N V G +R++ + GE
Sbjct: 195 RLGVIL-KKFTDVKDNQNAMITLKKEESLPGLLKKNGMVYEGYVLRIN--------MFGE 245
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
P ++ KK+V + NL + + ++Y L L D++ ++ +R++R V G+++VL
Sbjct: 246 -KPNFNRKKSVCIKNLDRKINESDLYNL---LKDVD-QIKGIRILRDERTSVSTGVSFVL 300
Query: 389 FKTR 392
F+ R
Sbjct: 301 FENR 304
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G+ ++K D TED + + DD ++ +FVG L V L KEF KFGE+ S
Sbjct: 375 GKNKRKGD--TEDGSAKKAKT--DDASGDIKNLFVGGLSWNVDDDWLKKEFEKFGEVISA 430
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIR 314
R+ I +G K Y+ F S E + +A A I G I
Sbjct: 431 RV---------ITERGTERSKGFG--------YVDFASPEDARKAVEAMAGTEIDGRTIN 473
Query: 315 LDRACP-----PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
+D + P P++K L T+F+GNLPF + +Y+ F D+ S
Sbjct: 474 VDFSAPKPERPPQEKRSFGQEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINS---- 529
Query: 370 VRVIRHPHMRVGKGIAYVLFKTR 392
VR+ P KG YV F T+
Sbjct: 530 VRLPTDPETERIKGFGYVEFATQ 552
>gi|340056502|emb|CCC50835.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 429
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
VH + ++E + RT+FVGNL +K++ + K F G I+SVRIR+ + K
Sbjct: 111 VHLRHSLQENEEENCRTVFVGNLVNCIKRRVVEKVFKDCGPIESVRIRAQALETVGARAK 170
Query: 271 GA------ILQKQINENAD------------SVHAYIVFKSEQSTEAALAFNMAVIGGNH 312
G ++ K + S AY++FKS S AL N V+ G H
Sbjct: 171 GGDDSGKKVVPKHVGRAIRVLRGDLKTGEQYSAVAYVLFKSASSVPEALKHNGVVVEGRH 230
Query: 313 IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC--GLNDLESSVEAV 370
I + ++ K E +VF+GN+ + +E + F GL+D V V
Sbjct: 231 IVVTAMDMESREYKPE--------LSVFIGNIDYGTNEESVRNFFVEKGLDD----VRRV 278
Query: 371 RVIRHPHMRVGKGIAYVLF 389
R+IR V KG YV F
Sbjct: 279 RLIRDRETGVCKGFGYVEF 297
>gi|296472242|tpg|DAA14357.1| TPA: RNA binding motif protein 34 [Bos taurus]
Length = 273
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 167 NQRKKIQINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 222
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMA 306
+ + +K A ++++I+ + +++AY+VFK E + AL N A
Sbjct: 223 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALERNGA 265
>gi|295665262|ref|XP_002793182.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278096|gb|EEH33662.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 611
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 131/322 (40%), Gaps = 102/322 (31%)
Query: 160 ENKKTKKRK-RDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK---KADNETEDMLVHRKE 215
EN + +KR DD+E Y+++ AKEEE +++ ++RK +N++E + E
Sbjct: 132 ENGRKRKRAGADDLEGAYMQRIVKEEAKEEEKRRIEKAKRRKVENAVENDSEPLASESDE 191
Query: 216 EGFDDE------------------------GKLLRTIFVGNLPL-----KVKKKTLIKEF 246
EG + K RT+F+ N+ K KK L+K
Sbjct: 192 EGNSESESDCISSPPPVHESLTDTVDSAVLDKSARTVFLSNVSTEAIKSKTAKKALLKHL 251
Query: 247 IKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSE- 294
F +I+S+R RS +P++ A ++++ + S +AY+V+ +
Sbjct: 252 SSFFPSLPDSTTPHKIESIRFRSTAFSTNAMPKRAAYAKRELMDSTTRSTNAYVVYTTTV 311
Query: 295 QSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL---------- 344
+ A A N + + H+R+D P +P+ D K+ +FVGNL
Sbjct: 312 AARRAPKALNGSFVLDRHLRVDSVSHP--------SPI-DYKRCIFVGNLGFVDEETPTE 362
Query: 345 -------------PFDVKDEEIYQLF-----CGLNDLESS-------------------V 367
P DV +E +++ F + L S V
Sbjct: 363 EKAVQQTKKKNTPPADV-EEGLWRTFNEHTHSAIAKLSKSLAKSKGSDASNINNPAIGPV 421
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
E VRVIR P R+GKGIAYV F
Sbjct: 422 EFVRVIRDPATRIGKGIAYVQF 443
>gi|312385885|gb|EFR30277.1| hypothetical protein AND_00214 [Anopheles darlingi]
Length = 399
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
IF+GNLP + + + F +G I +VR R+ KIPR+ + + S+
Sbjct: 192 AIFIGNLPPTINQNKVKSLFKPYGTILTVRFRTNE--GGKIPRRKDM------KKLKSLI 243
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
YI F S+ E A A + ++ N IR+ CP ++K G K TVFVGN+
Sbjct: 244 CYIRFSSKSEMEQACAMDGQLVEENRIRV---CPQKQKQIGA------TKSTVFVGNI-- 292
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
D E+Y F G+ ++E VR I + KG+A+V FK V
Sbjct: 293 TTTDNELYDFFSGV----GAIEYVRQIAN------KGVAFVCFKKGV 329
>gi|156093389|ref|XP_001612734.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148801608|gb|EDL43007.1| RNA binding protein, putative [Plasmodium vivax]
Length = 491
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 18/176 (10%)
Query: 221 EGKLLRTIFVGNLPLK--VKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK--GAILQK 276
E K R++F+GNLPLK K K L +K ++SVR RS P+ + RK G IL K
Sbjct: 227 EDKAKRSVFIGNLPLKDMHKAKLLKLLDLKKSAVESVRFRSQPMEEAYAARKKLGVIL-K 285
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
+ + D+ +A I K E+S L N V G +R++ + GE P ++ K
Sbjct: 286 KFTDAKDNQNAIITLKKEESLPDLLKKNGLVHEGYVLRIN--------MLGE-KPTFNRK 336
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
K+V + NL + + ++Y+L +++ + +R++R V G+++VLF+ R
Sbjct: 337 KSVCIKNLDRKLNESDLYRLLKDVDE----IRGIRILRDERTSVSTGVSFVLFQNR 388
>gi|407408078|gb|EKF31640.1| RNA binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 381
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+GVG+ +K ++ L H E ++E RT+FVGNL VK++ + K F G I
Sbjct: 98 LGVGKAAEKKGIKSNKHLRHALHENREEES---RTVFVGNLVNDVKRRVVEKVFKNCGAI 154
Query: 253 DSVRIRSVPI------------IDTKIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEA 299
+ VRIR+ + + R +L+ +I + S AY++FK E S
Sbjct: 155 ECVRIRAQALEGGGEESRGNEKRHKSVGRAIRVLRGEIKKGDQYSAVAYVLFKDEGSVTK 214
Query: 300 ALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF 357
AL N V+ G HI + D+ Y + +VF+GN+ +D +E ++ F
Sbjct: 215 ALEMNGVVVDGRHIVVT--------TMDADSREYAPETSVFIGNIAYDTNEEMVWNFF 264
>gi|156375625|ref|XP_001630180.1| predicted protein [Nematostella vectensis]
gi|156217196|gb|EDO38117.1| predicted protein [Nematostella vectensis]
Length = 962
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 30/124 (24%)
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+++ Y+V+K+ ++ A+A N I G HIR+D A + +D +++VF+GN
Sbjct: 727 TLNGYVVYKTAENANQAIASNGEEIDGFHIRVDLAS---------NDKAHDHQRSVFIGN 777
Query: 344 LPF-------------DVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
LPF ++++E + +LF CG +VE+VR+IR +GKG YVL
Sbjct: 778 LPFVLIQNPKSFVFVPNIEEEPLRELFTTCG------NVESVRLIRDRKTGIGKGFGYVL 831
Query: 389 FKTR 392
F+++
Sbjct: 832 FESK 835
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
R+ + + RK + +K+ + +++ Y+V+K+ ++ A+A N I G HIR+D
Sbjct: 522 RTKALAKPNLSRKVGMKRKEFHSERHTLNGYVVYKAAENANQAIASNGEEIDGFHIRVDL 581
Query: 318 ACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSV 367
A + +D +++VF+GNLPF K +I L GL + S++
Sbjct: 582 AS---------NDKAHDHQRSVFIGNLPFGNK-LKILPLELGLLNSLSAI 621
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 159 SENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF 218
S+NK K+RK DD++ V E+ R N T
Sbjct: 73 SQNKTAKRRKDDDIDSKNETGDLPVELSEKPSSNREAAMNRINKKNPTPTP--------- 123
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIK-FGEI 252
+D +L RT+FVGNLPL +KKKT + I FG +
Sbjct: 124 EDPERLDRTVFVGNLPLTLKKKTFYQWVISLFGNL 158
>gi|260830184|ref|XP_002610041.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
gi|229295404|gb|EEN66051.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
Length = 542
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 8/61 (13%)
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
++D K ++FVGNLPFDV+D+ +Y+ F CG VE VR+IR +GKG YVLF
Sbjct: 383 IFDHKLSIFVGNLPFDVEDDSVYEHFSQCG------EVEGVRIIRDSKSGLGKGFGYVLF 436
Query: 390 K 390
+
Sbjct: 437 Q 437
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV-----PIIDTKIP------------ 268
RT+FVGNLP+ KK L K F KFGEI+SVR RS+ I +P
Sbjct: 349 RTVFVGNLPVSTTKKELKKMFRKFGEIESVRFRSIFDHKLSIFVGNLPFDVEDDSVYEHF 408
Query: 269 -RKGAILQKQINENADS----VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC 319
+ G + +I ++ S Y++F+ S A+ N G IR+ RA
Sbjct: 409 SQCGEVEGVRIIRDSKSGLGKGFGYVLFQDSASVGLAIRLNEKTFSGRKIRVKRAV 464
>gi|70943753|ref|XP_741886.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520546|emb|CAH84921.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 239
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 16/170 (9%)
Query: 226 RTIFVGNLPLK-VKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIP-RKGAILQKQINENA 282
RT+FVGN+PL V L+K I ++SVR RS+P+ + +K ++ K+ +
Sbjct: 61 RTVFVGNIPLNDVSNLKLLKILGINKSLVESVRFRSLPLEEKYANNKKLGVMLKKFTDVK 120
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+ +A I K ++ L N V G +R++ K D + KK+V V
Sbjct: 121 DNKNALIRMKRKEDVSLLLKKNGTVYNGYVLRVN---------KFGDQSNFSRKKSVCVK 171
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
NL + ++++Y+LF G+++ ++ VR++R +G+A++LF+ R
Sbjct: 172 NLDRSLSEKDLYELFKGVDE----IKGVRILRDLENSQSRGVAFILFENR 217
>gi|71657336|ref|XP_817185.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882360|gb|EAN95334.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 421
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+GVG+ +K ++ L H E ++E RT+FVGNL VK++ + K F G I
Sbjct: 98 LGVGKAAEKKGIKSNKHLRHALHENKEEES---RTVFVGNLVNDVKRRIVEKVFKNCGAI 154
Query: 253 DSVRIRSVPI------------IDTKIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEA 299
+ VRIR+ + + R +L+ +I + S AY++FK E S
Sbjct: 155 ECVRIRAQALEGGGEEGRRNENRHKSVGRAIRVLRGEIKKGDQYSAVAYVLFKDEGSVTK 214
Query: 300 ALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF 357
AL N V+ G HI + ++ Y + +VF+GN+ +D +E ++ F
Sbjct: 215 ALEMNGVVVDGRHIVVTTMDAKSRE--------YAPETSVFIGNIAYDTNEEMVWNFF 264
>gi|396472606|ref|XP_003839165.1| similar to nucleolar protein 12 [Leptosphaeria maculans JN3]
gi|312215734|emb|CBX95686.1| similar to nucleolar protein 12 [Leptosphaeria maculans JN3]
Length = 555
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 52/204 (25%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K +K L K F +I+S+R RS + +
Sbjct: 234 KASRTVFLSNVSSECINSKAAEKALRKHLESFLVDLADNNPPHKIESIRFRSTAFASS-L 292
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K+I + S +AY V+ ++ + EA N ++ H+ +D P K
Sbjct: 293 PKRAAFAKKEIMDSTTKSTNAYAVYTTKVAAREAVKRLNGTLLLDRHLHVDSVAHPAK-- 350
Query: 326 KGEDAPLYDIKKTVFVGNLPF--------------------DVKDEEIYQLFCGLNDLES 365
D ++ VFVGNLPF DV +E ++ F +ES
Sbjct: 351 -------VDHRRCVFVGNLPFVDDREPASTDEKPKKPRPSSDV-EEGLWVHFAKAGKIES 402
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLF 389
VRV+R R+GKG AYV F
Sbjct: 403 ----VRVVRDAQTRIGKGFAYVQF 422
>gi|407860762|gb|EKG07479.1| RNA binding protein, putative [Trypanosoma cruzi]
Length = 421
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+GVG+ +K ++ L H E ++E RT+FVGNL VK++ + K F G I
Sbjct: 98 LGVGKAAEKKGIKSNKHLRHALHENKEEES---RTVFVGNLVNDVKRRIVEKVFKNCGAI 154
Query: 253 DSVRIRSVPI------------IDTKIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEA 299
+ VRIR+ + + R +L+ +I + S AY++FK E S
Sbjct: 155 ECVRIRAQALEGGGEEGNRNENRHKSVGRAIRVLRGEIKKGDQYSAVAYVLFKDEGSVTK 214
Query: 300 ALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF 357
AL N V+ G HI + ++ Y + +VF+GN+ +D +E ++ F
Sbjct: 215 ALEMNGVVVDGRHIVVTTMDAESRE--------YAPETSVFIGNIAYDTNEEMVWNFF 264
>gi|307103265|gb|EFN51527.1| hypothetical protein CHLNCDRAFT_140240 [Chlorella variabilis]
Length = 142
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI---IDTKIPRKGAILQKQIN 279
+L RT+FVGNLP VK+K+L + F G ++SVR+RS+P+ +KIPR+GAI I+
Sbjct: 76 RLPRTVFVGNLPAHVKRKSLAQLFAGCGRVESVRLRSLPLQRDPTSKIPRRGAIASGAID 135
Query: 280 ENADSVHA 287
+ S HA
Sbjct: 136 AD-QSAHA 142
>gi|158519849|ref|NP_001103552.1| RNA-binding protein 34 [Bos taurus]
gi|158455018|gb|AAI09867.1| RBM34 protein [Bos taurus]
Length = 272
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 167 NQRKKIQINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 222
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA 300
+ + +K A ++++I+ + +++AY+VFK E + A
Sbjct: 223 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKA 259
>gi|71653118|ref|XP_815201.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70880241|gb|EAN93350.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 421
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+GVG+ +K ++ L H E ++E RT+FVGNL VK++ + K F G I
Sbjct: 98 LGVGKAAEKRGIKSNKHLRHALHENKEEES---RTVFVGNLVNDVKRRIVEKIFNNCGAI 154
Query: 253 DSVRIRSVPI------------IDTKIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEA 299
+ VRIR+ + + R +L+ +I + S AY++FK E S
Sbjct: 155 ECVRIRAQALEGGGEEGRRNENRHKSVGRAIRVLRGEIKKGDQYSAVAYVLFKDEGSVTK 214
Query: 300 ALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF 357
AL N V+ G HI + ++ Y + +VF+GN+ +D +E ++ F
Sbjct: 215 ALEMNGVVVDGRHIVVTTMDAESRE--------YAPETSVFIGNIAYDTNEEMVWNFF 264
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 33/171 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSV 285
T+FVGNL V ++ L F G ++S RI I D + R KG
Sbjct: 184 TVFVGNLSWNVDEEMLAATFADCGTVESARI----ITDKETGRAKG-------------- 225
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPR--KKLKGEDAPLYDIKKTVFV 341
Y+ F+S + AA+A + G IR+D + PPR + ++AP T+F+
Sbjct: 226 FGYVTFESADALTAAMALTGTELDGREIRVDVSTPKPPRDGNRQGRKEAPQSAPTTTLFL 285
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR---VGKGIAYVLF 389
GNL F+V ++EI + F L S +R P R KG YV +
Sbjct: 286 GNLSFNVTEDEIRESFSQYGQLVS-------VRFPTDRDTGAFKGFGYVEY 329
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHM 378
P KK K E+ + TVFVGNL ++V +E + F CG +VE+ R+I
Sbjct: 171 PTKKPKTEE----PVNSTVFVGNLSWNVDEEMLAATFADCG------TVESARIITDKET 220
Query: 379 RVGKGIAYVLFKT 391
KG YV F++
Sbjct: 221 GRAKGFGYVTFES 233
>gi|239607831|gb|EEQ84818.1| nucleolar protein 12 [Ajellomyces dermatitidis ER-3]
Length = 532
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 64/233 (27%)
Query: 163 KTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFD 219
K +KRKR DD+E+ Y+ + AKE+E ++ ++RK + V R+ + D
Sbjct: 36 KGRKRKRGGADDLEESYMRRMAKEDAKEDEKRRSEKAKRRKVVET------VGRESDSSD 89
Query: 220 DEG-----------------------------KLLRTIFVGNLPL-----KVKKKTLIKE 245
EG K RT+F+ N+ K KKTL++
Sbjct: 90 SEGNDEGNEDSIASPPPLHESLSNNPDAALLDKSARTVFLSNVSTEAIKSKSAKKTLLRH 149
Query: 246 FIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSE 294
F +I+S+R RS +P++ A ++++ + S +AY+V+ +
Sbjct: 150 LSSFIPSLPESATPHKIESIRFRSTAFATRSMPKRAAYAKRELMDSTTRSTNAYVVYTTT 209
Query: 295 QST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+ A A N +VI H+R+D P AP+ D K+ +FVGNL F
Sbjct: 210 AAARRAPQALNGSVILDRHLRVDSVAHP--------APV-DYKRCIFVGNLGF 253
>gi|123468140|ref|XP_001317333.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121900064|gb|EAY05110.1| hypothetical protein TVAG_108440 [Trichomonas vaginalis G3]
Length = 332
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII-DTKIPRKGAILQKQIN--ENA 282
RT+F+GN+P K + + +FG I+SVRIR++ D K+ +K A+ + + +NA
Sbjct: 62 RTLFIGNIPAKFDNDDVKRLCKEFGPIESVRIRNLQFKEDRKVNKKVAVRRGDFDKTQNA 121
Query: 283 DSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPR--KKLKGEDAPLYDIKKTV 339
D AY+VFK+ E +A + + G +R D+A P +K+ E++ +TV
Sbjct: 122 D---AYVVFKNVEDRDKAIVGLKNKEVEGFTLRTDKATPKNVSEKISNEES-----NRTV 173
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+G L V ++ + +LF + ++ V++ R + +AYV F
Sbjct: 174 FIGQLKPTVTEDMLRKLFSNAGE----IDHVKIPRDRETGKSRYVAYVTF 219
>gi|68062875|ref|XP_673446.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491300|emb|CAI01718.1| conserved hypothetical protein [Plasmodium berghei]
Length = 196
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 16/170 (9%)
Query: 226 RTIFVGNLPLK-VKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRKG-AILQKQINENA 282
RT+FVGN+PL V L+K I ++S+R RS+P+ + +K I+ K+ +
Sbjct: 5 RTVFVGNIPLNDVSNLKLLKILGINKSLVESIRFRSLPLEEKYANKKKLGIMLKKFTDVK 64
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+ +A I K ++ L N V G+ +R++ K D + KK+V +
Sbjct: 65 DNKNALIRMKRKEDISLLLDKNGTVYNGHVLRIN---------KCGDQNYFSRKKSVCLK 115
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
NL + ++++Y+LF +++ ++ VR++R +G+A++LFK R
Sbjct: 116 NLDRSLSEKDLYELFKDIDE----IKGVRILRDVENSQSRGVAFILFKNR 161
>gi|327358075|gb|EGE86932.1| nucleolar protein 12 [Ajellomyces dermatitidis ATCC 18188]
Length = 617
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 64/233 (27%)
Query: 163 KTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFD 219
K +KRKR DD+E+ Y+ + AKE+E ++ ++RK + V R+ + D
Sbjct: 121 KGRKRKRGGADDLEESYMRRMAKEDAKEDEKRRSEKAKRRKVVET------VGRESDSSD 174
Query: 220 DEG-----------------------------KLLRTIFVGNLPL-----KVKKKTLIKE 245
EG K RT+F+ N+ K KKTL++
Sbjct: 175 SEGNDEGNEDSIASPPPLHESLSNNPDAALLDKSARTVFLSNVSTEAIKSKSAKKTLLRH 234
Query: 246 FIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSE 294
F +I+S+R RS +P++ A ++++ + S +AY+V+ +
Sbjct: 235 LSSFIPSLPESATPHKIESIRFRSTAFATRSMPKRAAYAKRELMDSTTRSTNAYVVYTTT 294
Query: 295 QST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+ A A N +VI H+R+D P AP+ D K+ +FVGNL F
Sbjct: 295 AAARRAPQALNGSVILDRHLRVDSVAHP--------APV-DYKRCIFVGNLGF 338
>gi|388582627|gb|EIM22931.1| hypothetical protein WALSEDRAFT_6282, partial [Wallemia sebi CBS
633.66]
Length = 370
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 61/223 (27%)
Query: 226 RTIFVGNLPLKVKK-----KTLIKEFIKFGEI------DSVRIRSVPI-IDT-------- 265
RT+FVGN+P + K K L++ ++ ++ DS+R RSV + T
Sbjct: 10 RTVFVGNIPAEAAKSKPLSKKLVRHLMEISDLPPTAKYDSIRFRSVAFSVPTSASAKSNA 69
Query: 266 --------KIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL---------------- 301
K RK A +++ ++ +A SV+AY+VF +S + L
Sbjct: 70 DNKRYQTPKQKRKVAFIKQDLHPDAASVNAYVVFGYRRSNDVVLLNNKDKDIPPSEVAQK 129
Query: 302 ---AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC 358
A N + G +R+DR K K+T++VG L F KD E+ +
Sbjct: 130 VVDAANGSTFEGRILRVDRVLNVDKTGTRWHIDKDMAKRTLYVGRLDFGQKDNELGEFIE 189
Query: 359 GL--------------NDLESSVEAVRVIRHPHMRVGKGIAYV 387
L + +S V VR++R P ++GKG YV
Sbjct: 190 KLLNEEKGTYKSKDADDKAKSWVRGVRIVRDPDTQLGKGFGYV 232
>gi|256073259|ref|XP_002572949.1| RNA binding protein [Schistosoma mansoni]
gi|353230968|emb|CCD77385.1| putative rna binding protein [Schistosoma mansoni]
Length = 547
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 70/177 (39%), Gaps = 53/177 (29%)
Query: 223 KLLRTIFVGNLPLKVKKK---TLIKEFIKFGEI-------DSVRIRSVPIIDTKIPRKGA 272
+L RTIFVGNLPL + KK L +K +I +SVR R V IP G
Sbjct: 299 RLSRTIFVGNLPLNITKKRIEALFNNVLKNNKISSSDCCVESVRFRGV------IPVTGG 352
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
+ LA A I G +D+A D
Sbjct: 353 T-------------------------SRLARKRAAITG-EFSVDKA-------TDNDKTH 379
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ VFVGNLPFD +EEIY L S+++VR+IR +G YV +
Sbjct: 380 CKLDNCVFVGNLPFDCTEEEIYSTLSTL----GSIKSVRLIRDSQTGAVRGFGYVAY 432
>gi|71029664|ref|XP_764475.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351429|gb|EAN32192.1| hypothetical protein, conserved [Theileria parva]
Length = 324
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 38/183 (20%)
Query: 214 KEEGFDDEGKLLRTIFVGNLPLKVKKKT-LIKEF-IKFGEIDSVRIRSVPIIDTKIPR-- 269
KE +D + L +F+GN+PL +K K+ L+K+ I I SV RS+PI K R
Sbjct: 106 KENLYDPKDSAL--VFIGNVPLTIKTKSDLVKKLQIDPKIIQSVHFRSLPI-HPKYARNK 162
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED 329
K A+++++ ++ D+ +AY+ + L N
Sbjct: 163 KVAVIKQKFSDAKDNQNAYVKLSDPKYLNELLEKNK------------------------ 198
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ KKTVFVG LP ++++Y +F + S V+AVR++R P KG +V F
Sbjct: 199 ---FSRKKTVFVGRLPPTANEDDLYNIFMNI----SPVKAVRIVRDPVTMKSKGFGFVAF 251
Query: 390 KTR 392
R
Sbjct: 252 DNR 254
>gi|124802467|ref|XP_001347479.1| NOP12-like protein [Plasmodium falciparum 3D7]
gi|23495060|gb|AAN35392.1| NOP12-like protein [Plasmodium falciparum 3D7]
Length = 322
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 91/170 (53%), Gaps = 16/170 (9%)
Query: 226 RTIFVGNLPLK-VKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRKG-AILQKQINENA 282
RTIFVGN+P+K V L+K I+ +++VR RS+P+ + +K +++K+ +
Sbjct: 78 RTIFVGNIPIKDVSISKLLKILNIEKSIVETVRFRSLPLEEKYADKKRLGVMRKKFTDVK 137
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+ +A + K E+ L N V G +R++ K D+ + KK++ +
Sbjct: 138 DNKNALVTLKEEKDVPLLLERNGTVYEGYVLRVN---------KFGDSKSFSRKKSICIK 188
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
NL + ++++Y++ ++ +++ VR++R + G A++LF++R
Sbjct: 189 NLCKKLNEKDLYEIMKDVD----TIKGVRILRDTATSMSTGTAFILFESR 234
>gi|405123004|gb|AFR97769.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 597
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 98/271 (36%), Gaps = 95/271 (35%)
Query: 215 EEGFDDEGKLLRTIFVGNLPL-KVKKKTLIKE-------FIKFGEIDSVRIRSVPI---- 262
EE D+ + RT F+GNLP+ K K+++K+ F+ +I+S+R RSV
Sbjct: 168 EESVQDKNR--RTAFIGNLPIDAAKSKSILKQLRAHIMSFVPSAKIESLRFRSVAFATPT 225
Query: 263 ---------------------------------------------IDTKIPRKGAILQKQ 277
ID K RK A ++K
Sbjct: 226 AALPTEDPEKDANQRAKREKERAAAWKAKQNTDGEDAELDKAKVFIDAKGKRKVAFIKKD 285
Query: 278 INENADSVHAYIVFKSEQST------------EAALAF----NMAVIGGNHIRLDRA-CP 320
+ DS +AY+VF EAA F N + G IR+D P
Sbjct: 286 FHSEIDSCNAYVVFAYPHPDRAANVAPILDPFEAAAKFIASANSSTFSGRTIRVDSVRLP 345
Query: 321 PRKKLKGEDAPL----------YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS---- 366
L G L D KK++FVG L + K+E++ F L E
Sbjct: 346 SSVALAGASTSLSKRDAWLPSNTDPKKSLFVGGLDYAAKEEDVRVFFEELVKAERGANKE 405
Query: 367 -----VEAVRVIRHPHMRVGKGIAYVLFKTR 392
V VR++R ++GKG YV F R
Sbjct: 406 GSGKWVTGVRIVRDKETQLGKGFGYVHFADR 436
>gi|159479546|ref|XP_001697851.1| hypothetical protein CHLREDRAFT_193055 [Chlamydomonas reinhardtii]
gi|158273949|gb|EDO99734.1| predicted protein [Chlamydomonas reinhardtii]
Length = 561
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 60/145 (41%), Gaps = 47/145 (32%)
Query: 246 FIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQIN-ENADSVHAYIVFKSEQSTEAALAF 303
F FG I+SVR+R+VP+ +D +PR+ AIL ++ E AY+VFK E S AAL
Sbjct: 396 FASFGTIESVRMRAVPVKVDAAMPRRSAILSGAVDTERGLPCTAYVVFKEEVSARAALTA 455
Query: 304 NMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN-- 361
NM DE++ G
Sbjct: 456 NM-----------------------------------------QTSDEDLIGFVLGKAAD 474
Query: 362 --DLESSVEAVRVIRHPHMRVGKGI 384
+L SVEAVRV+R VGKGI
Sbjct: 475 HPELADSVEAVRVVRDRATNVGKGI 499
>gi|321252996|ref|XP_003192590.1| RNA-binding protein [Cryptococcus gattii WM276]
gi|317459059|gb|ADV20803.1| RNA-binding protein, putative [Cryptococcus gattii WM276]
Length = 593
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 97/272 (35%), Gaps = 96/272 (35%)
Query: 215 EEGFDDEGKLLRTIFVGNLPL-KVKKKTLIKE-------FIKFGEIDSVRIRSVPI---- 262
EE D+ + RT F+GNLP+ K K+ +K+ F+ +I+S+R RSV
Sbjct: 165 EESVQDKNR--RTAFIGNLPIDAAKSKSTLKQLRAHIMSFVPSAKIESLRFRSVAFATPT 222
Query: 263 ---------------------------------------------IDTKIPRKGAILQKQ 277
ID K RK A ++K
Sbjct: 223 AALPTEDPEKDANQRAKREKERAAAWKAKQNADGEDAELDKAKVFIDAKGKRKVAFIKKD 282
Query: 278 INENADSVHAYIVFKSEQSTEAA----------------LAFNMAVIGGNHIRLDRACPP 321
+ DS +AY+VF AA A N + G IR+D P
Sbjct: 283 FHSEIDSCNAYVVFAYPHPERAANVAPILDPFEAAAKFISAANSSTFCGRTIRVDSVRLP 342
Query: 322 RK---------KLKGEDAPL---YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS--- 366
L DA L D KK++FVG L + K+E++ F L E
Sbjct: 343 SSASLPAGASTSLSKRDAWLPSNTDPKKSLFVGGLDYAAKEEDVRVFFEELVKAERGANK 402
Query: 367 ------VEAVRVIRHPHMRVGKGIAYVLFKTR 392
V VR++R ++GKG YV F R
Sbjct: 403 EGSGKWVTGVRIVRDKETQLGKGFGYVHFADR 434
>gi|58264448|ref|XP_569380.1| RNA-binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134110097|ref|XP_776259.1| hypothetical protein CNBC6480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258931|gb|EAL21612.1| hypothetical protein CNBC6480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225612|gb|AAW42073.1| RNA-binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 584
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 98/271 (36%), Gaps = 95/271 (35%)
Query: 215 EEGFDDEGKLLRTIFVGNLPL-KVKKKTLIKE-------FIKFGEIDSVRIRSVPI---- 262
EE D+ + RT F+GNLP+ K K+ +K+ F+ +I+S+R RSV
Sbjct: 161 EESVQDKNR--RTAFIGNLPIDAAKSKSTLKQLRAHIMSFVPSAKIESLRFRSVAFATPT 218
Query: 263 ---------------------------------------------IDTKIPRKGAILQKQ 277
ID K RK A ++K
Sbjct: 219 AALPTEDPEKDANQRAKREKERAAAWKAKQNADGEDAELDKAKVFIDAKGKRKVAFIKKD 278
Query: 278 INENADSVHAYIVFKSEQST------------EAALAF----NMAVIGGNHIRLDRACPP 321
+ DS +AY+VF EAA F N + G IR+D P
Sbjct: 279 FHSEIDSCNAYVVFAYPHPDRAANVAPILDPFEAAAKFIASANSSTFSGRTIRVDSVRLP 338
Query: 322 RK--------KLKGEDAPL---YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS---- 366
L DA L D KK++FVG L + K+E++ F L E
Sbjct: 339 SSVGLAGASTSLSKRDAWLPSNTDPKKSLFVGGLDYAAKEEDVRVFFEELVKAERGANKE 398
Query: 367 -----VEAVRVIRHPHMRVGKGIAYVLFKTR 392
V VR++R ++GKG YV F R
Sbjct: 399 GSGKWVTGVRIVRDKETQLGKGFGYVHFADR 429
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 27/170 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIFVG L V L +EF + GE+ S R+ Q N
Sbjct: 44 KTIFVGKLSWNVDNDWLAQEFAECGEVVSARV-----------------QMDRNTGKSRG 86
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYDIKKT-----V 339
Y+ F + ++ +AA+A N I G + +D++ K ++ + A Y K + +
Sbjct: 87 FGYVTFATVEAVDAAIAQNGKEIDGRAVNIDKSIEKDKGAVRQKRAEAYGDKASEPSSVL 146
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
FVGNL +D ++ +++ F D++S VRV KG AYV F
Sbjct: 147 FVGNLSWDATEDTLWETFNEYGDIKS----VRVPTDRETGKPKGFAYVEF 192
>gi|225561960|gb|EEH10240.1| nucleic acid-binding protein [Ajellomyces capsulatus G186AR]
Length = 325
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 34/168 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL +V + L ++ KFG I SVRI + D++ +G
Sbjct: 118 TIYVGNLFFEVTAEDLKRDMAKFGTIYSVRI----VYDSRGMSRG--------------F 159
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD----RACPPRKKLKGEDAPLYDIKKTVFV 341
AY+ F S ++ EAA++ NM++ G I ++ + PR + + KT+F+
Sbjct: 160 AYVQFDSVEAAEAAISEMNMSIYEGRRIVVNYSTRNSAAPRTRAS-------EPTKTLFI 212
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
GNL F++ D E+ LF + + V+ VRV +G A+ F
Sbjct: 213 GNLSFEMTDRELNDLFRDIPN----VDDVRVSVDKRTGRPRGFAHADF 256
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IFVG L V L +EF + GE+ S A +Q N
Sbjct: 309 SIFVGQLSWSVDNDRLAQEFSECGEVSS-----------------ATVQLDRNTGRSRGF 351
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYD-----IKKTVF 340
Y+ F + + E AL N I G I++D + PP +++ A +++ T+F
Sbjct: 352 GYVHFSTADAVEKALKMNGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEISPPSSTLF 411
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYV 387
+GNLPF + ++ ++ F G +V+ IR P R G KG YV
Sbjct: 412 IGNLPFSITEDGLWSYFDG--------HSVKTIRLPTDRETGQLKGFGYV 453
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IFVG L V L +EF + GE+ S A +Q N
Sbjct: 309 SIFVGQLSWSVDNDRLAQEFSECGEVSS-----------------ATVQLDRNTGRSRGF 351
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYD-----IKKTVF 340
Y+ F + + E AL N I G I++D + PP +++ A +++ T+F
Sbjct: 352 GYVHFSTADAVEKALKMNGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEISPPSSTLF 411
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYV 387
+GNLPF + ++ ++ F G +V+ IR P R G KG YV
Sbjct: 412 IGNLPFSITEDGLWSYFDG--------HSVKTIRLPTDRETGQLKGFGYV 453
>gi|154283501|ref|XP_001542546.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410726|gb|EDN06114.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 641
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 59/234 (25%)
Query: 163 KTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK------------------- 200
K +KRKR +D+E+ Y+ + AKE+E ++ +++K
Sbjct: 132 KRRKRKRGGAEDIEESYMRRIAKEEAKEDEKRRSEKAKRQKIVESVGRESDSSDSESDNE 191
Query: 201 KADNETED--------MLVHRKEEGFDDEG---KLLRTIFVGNLPL-----KVKKKTLIK 244
+ ++ T D +VH D K RTIF+ N+ K KKTL+K
Sbjct: 192 EGEDGTSDNVDGIDNPPIVHESNSSKPDAALLDKSARTIFLSNVSTEAIKSKSAKKTLLK 251
Query: 245 EFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKS 293
F +I+S+R RS +P++ A ++++ + S +AY+V+ +
Sbjct: 252 HLCSFFPSLPESATPHKIESIRFRSTAFSTQSMPKRAAYAKRELMDSTTRSTNAYVVYST 311
Query: 294 EQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+ A A N +VI H+R+D P AP+ D K+ VFVGNL F
Sbjct: 312 TAAARGAPKALNGSVILDRHLRVDSVAHP--------API-DYKRCVFVGNLGF 356
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 188 EEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFI 247
EE K V K++KA+ E K + D E +FVGN+ V ++ L +EF
Sbjct: 205 EEEKPKAVESKKRKAEAEPAHATKKNKTDAVD-ESAPTGNLFVGNISWNVDEEWLTREFE 263
Query: 248 KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMA 306
+FGE+ VRI I D R Y+ F Q+ + AL A N A
Sbjct: 264 EFGELAGVRI----ITDRDSGRSKGF-------------GYVEFSDPQNAKKALEAKNGA 306
Query: 307 VIGGNHIRLDRACP-----PRKKLKGED--APLYDI----KKTVFVGNLPFDVKDEEIYQ 355
+ G +RLD + P P K D A D T+FVGN+ FD + I +
Sbjct: 307 ELDGRELRLDFSTPRTNDGPGAGNKSNDRAARFGDTTNAPAATLFVGNISFDADENAITE 366
Query: 356 LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
F +++AVR+ KG YV
Sbjct: 367 YF----QEHGTIKAVRLPTDRETGAPKGFGYV 394
>gi|301090291|ref|XP_002895366.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099037|gb|EEY57089.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 263
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG-------A 272
DE K RT+FVGN+ L +K + K F G+++SVR+R +PI + G
Sbjct: 154 DELKERRTVFVGNVSLDATQKDIKKHFSVCGQVESVRLRHLPIAGCAVGDAGNQKLMMKV 213
Query: 273 ILQKQINENA-DSVHAYIVFKSEQSTEAALAFNMAV 307
K+I A D+ +AY+ F E S EAA+ N V
Sbjct: 214 CANKKILTTAKDNCNAYVTFVEESSAEAAIKLNGTV 249
>gi|225561868|gb|EEH10148.1| nucleolar protein [Ajellomyces capsulatus G186AR]
Length = 617
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 52/227 (22%)
Query: 163 KTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDM---------- 209
K +KRKR +D+E+ Y+ + AKE+E ++ +++K ++ +
Sbjct: 132 KRRKRKRGGAEDIEESYMRRIAKEEAKEDEKRRSEKAKRQKIVESVGRESDSSDSESDNE 191
Query: 210 ----------LVHRKEEGFDDEGKL---LRTIFVGNLPL-----KVKKKTLIKEFIKF-- 249
+VH D L RTIF+ N+ K KKTL+K F
Sbjct: 192 EDEDGIDNPPIVHESNSSKPDAALLDKSARTIFLSNVSTEAIKSKSAKKTLLKHLCSFFP 251
Query: 250 --------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAA 300
+I+S+R RS +P++ A ++++ + S +AY+V+ + + A
Sbjct: 252 SLPESATPHKIESIRFRSTAFSTQSMPKRAAYAKRELMDSTTRSTNAYVVYSTTAAARGA 311
Query: 301 L-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
A N +VI H+R+D P AP+ D K+ +FVGNL F
Sbjct: 312 PKALNGSVILDRHLRVDSVAHP--------API-DYKRCIFVGNLGF 349
>gi|240275573|gb|EER39087.1| nucleic acid-binding protein [Ajellomyces capsulatus H143]
Length = 332
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 30/136 (22%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL +V + L ++ KFG I SVRI + D++ +G
Sbjct: 125 TIYVGNLFFEVTAEDLKRDMAKFGTIYSVRI----VYDSRGMSRG--------------F 166
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD----RACPPRKKLKGEDAPLYDIKKTVFV 341
AY+ F S ++ EAA++ NM++ G I ++ + PR + + KT+F+
Sbjct: 167 AYVQFDSVEAAEAAISEMNMSIYEGRRIVVNYSTRNSAAPRTRAS-------EPTKTLFI 219
Query: 342 GNLPFDVKDEEIYQLF 357
GNL F++ D E+ LF
Sbjct: 220 GNLSFEMTDRELNDLF 235
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E E+ K E D + +F+GNL V ++ L +EF +FGE+ VRI
Sbjct: 215 KKRKADSEPEETSKKAKTESNPD---AVANLFIGNLSWNVDEEWLTREFEEFGELAGVRI 271
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
I D R Y+ F + + AL A N +++ +IR+D
Sbjct: 272 ----ITDRDSGRSKGF-------------GYVEFTNAEDAAKALEAKNESLLDNRNIRVD 314
Query: 317 RACPPRKKLKGE------------DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
+ P K G DAP + T++ GNL FD ++ + + F
Sbjct: 315 FSTPRDKSNAGPQQRSNDRQQKFGDAP-GEPTATIWCGNLSFDATEDVVREYFA----EH 369
Query: 365 SSVEAVRVIRHPHMRVGKGIAYV 387
+V ++R+ KG YV
Sbjct: 370 GNVNSIRLPTDRDTGAPKGFGYV 392
>gi|157133023|ref|XP_001662744.1| hypothetical protein AaeL_AAEL012618 [Aedes aegypti]
gi|108870977|gb|EAT35202.1| AAEL012618-PB [Aedes aegypti]
Length = 433
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 17/118 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IF+GNLP VKK T+ F ++G+I ++R RS I + +K+ + A +++
Sbjct: 305 SIFIGNLPNTVKKSTMKSLFNQYGKILTIRFRSNDGI--------TLFKKKDRKEAKALN 356
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
YI F+++ +AA A N ++ GN IR+ + + TVFVGN+
Sbjct: 357 CYIRFETKPEAQAACAMNGQLVEGNRIRVTMHMQKQ---------MGHASSTVFVGNI 405
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L V L +EF GEI+S A +Q N
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIES-----------------ATVQMDRNTGKSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP--------PRKKLKGED--APLYDIKK 337
Y+ F + + E AL N I G I++DR+ P R + G++ AP
Sbjct: 44 YVHFTTPDAVEKALQMNGQEIDGRAIKVDRSLPRDKSQVREKRAQAFGDEVSAP----SS 99
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
T+FVGNL F V ++ ++ F ND V++VR+ KG YV F+
Sbjct: 100 TLFVGNLSFGVTEDTVWSFF---NDY--GVKSVRLPTDRETGRPKGFGYVEFE 147
>gi|325091401|gb|EGC44711.1| nucleic acid-binding protein [Ajellomyces capsulatus H88]
Length = 359
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 30/136 (22%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL +V + L ++ KFG I SVRI + D++ +G
Sbjct: 152 TIYVGNLFFEVTAEDLKRDMAKFGTIYSVRI----VYDSRGMSRG--------------F 193
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD----RACPPRKKLKGEDAPLYDIKKTVFV 341
AY+ F S ++ EAA++ NM++ G I ++ + PR + + KT+F+
Sbjct: 194 AYVQFDSVEAAEAAISEMNMSIYEGRRIVVNYSTRNSAAPRTRAS-------EPTKTLFI 246
Query: 342 GNLPFDVKDEEIYQLF 357
GNL F++ D E+ LF
Sbjct: 247 GNLSFEMTDRELNDLF 262
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 27/168 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + L EF GE+ S RI ++D R
Sbjct: 205 TVFVGGLSWNIDNDWLASEFASCGEVVSARI----VLDRDTQRSRGF------------- 247
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK-----TVFV 341
Y+ F S A+ F + G +R++ A RK + A +++ K+ T+++
Sbjct: 248 GYVEFADVDSAIKAIEFEGKELDGRAVRVNFAN-ARKPDADKRAKVFNDKRSPPADTLWI 306
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
G+LPFD ++ IY+ F D++S VR+ KG YV F
Sbjct: 307 GSLPFDTTEDHIYETFGEYGDVQS----VRLPTDRETGAAKGFGYVTF 350
>gi|390603406|gb|EIN12798.1| hypothetical protein PUNSTDRAFT_131036 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 640
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 42/166 (25%)
Query: 269 RKGAILQKQINENADSVHAYIVFKSEQSTEAAL---------------AFNMAVIGGN-- 311
+K A ++ +++ N DS+ AYIVF + + A A AV+ G+
Sbjct: 315 KKVAFIKGELHPNVDSIVAYIVFAHPKPVQEASDAPTSQQHKIMNPFEAAQQAVLNGDGT 374
Query: 312 -----HIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE-- 364
+R+D A P D + D K +VFVGNL F K+E++ F L E
Sbjct: 375 VFMEHTLRVDHARPSEASKVAGDIAMGDPKLSVFVGNLDFATKEEDLRVFFEALLSTERG 434
Query: 365 ------------------SSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
S V VRV+R ++GKG AYV F R
Sbjct: 435 PPPAPGPDTIENIPAKRISWVTKVRVVRDRDTQMGKGFAYVQFLDR 480
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 70/171 (40%), Gaps = 27/171 (15%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+ TIFVG L V L EF + GE+ S R+ Q N
Sbjct: 299 VTTIFVGRLSWNVDNDWLKSEFEECGEVVSARV-----------------QMDRNTGKSR 341
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYDIKK-----T 338
Y+ F S + EAAL I G I +D++ K K++ A + +K T
Sbjct: 342 GFGYVEFTSPDAVEAALKLTGKEIDGRPINVDKSTGVSKDKVRDSRAKAFGDQKSEPSST 401
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+FVGNL F ++ +++ F D V+ VR+ KG AYV F
Sbjct: 402 LFVGNLSFSASEDVLWEAFASYGD----VKGVRMPTDRETGQPKGFAYVDF 448
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 40/206 (19%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E K E EG + +F+GNL V ++ L +EF +FGE+ VRI
Sbjct: 255 KKRKADEEPAATAKKSKTEEVP-EGAVA-NLFIGNLSWNVDEEWLQREFSEFGELSGVRI 312
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ D + R Y+ + S A+ + G I LD
Sbjct: 313 ----VTDRETGRSRGF-------------GYVEYNSAADAAKAMEAKKGTDLDGRTINLD 355
Query: 317 RACPPRKKLKGED-------------APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDL 363
A P + +G D +P D T+FVGNLPF ++ ++++F
Sbjct: 356 YAAPRQANTQGADRSQDRARSYGDQTSPESD---TLFVGNLPFSATEDALHEVFGA---- 408
Query: 364 ESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ SV +R+ KG YV F
Sbjct: 409 QGSVLGIRLPTEQETGRPKGFGYVQF 434
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ ET K E D +FVGNL V + L EF FGE+ VRI
Sbjct: 261 KKRKAEEETSATPKKSKTE--DPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRI 318
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ DT R + E ++V A F++++ E I G I LD
Sbjct: 319 MTE--RDTGRSRGFGYV-----EYTNAVDAAKAFEAKKGAE---------IDGRVINLDY 362
Query: 318 AC--PPRKKLKG---------------EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGL 360
A P K +G + +P D T+FVGNLPFD ++ + +LF
Sbjct: 363 ATGRPANKDQQGGFKDRANARARSFGDQASPESD---TLFVGNLPFDANEDSVGELFG-- 417
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ S+ +R+ P KG YV + +
Sbjct: 418 --EKGSILGIRLPTDPDSGRPKGFGYVQYSS 446
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ ET K E D +FVGNL V + L EF FGE+ VRI
Sbjct: 269 KKRKAEEETSATPKKSKTE--DPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRI 326
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ DT R + E ++V A F++++ E I G I LD
Sbjct: 327 MTE--RDTGRSRGFGYV-----EYTNAVDAAKAFEAKKGAE---------IDGRVINLDY 370
Query: 318 AC--PPRKKLKG---------------EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGL 360
A P K +G + +P D T+FVGNLPFD ++ + +LF
Sbjct: 371 ATGRPANKDQQGGFKDRANARARSFGDQASPESD---TLFVGNLPFDANEDSVGELFG-- 425
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ S+ +R+ P KG YV + +
Sbjct: 426 --EKGSILGIRLPTDPDSGRPKGFGYVQYSS 454
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E K E D+ L FVGNL V ++ L +EF FGE+ VRI
Sbjct: 201 KKRKAEEEPATNAKKSKTESADNSPNL----FVGNLSWNVDEEWLRREFESFGELSGVRI 256
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ + + R E AD+ A +++++ TE + G I LD
Sbjct: 257 ----MTERETGRSRGF---GYVEYADASSAKAAYEAKKDTE---------LDGRTINLDY 300
Query: 318 ACP-------PRKKLKGEDAPLYDI----KKTVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
A P PR+K + D T+FVGNL F V + + ++F G +
Sbjct: 301 AKPRDANSQAPREKAQTRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEG----QGQ 356
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKT 391
++ VR+ KG YV F +
Sbjct: 357 IQGVRLPTDAETGRPKGYGYVEFSS 381
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 70/176 (39%), Gaps = 32/176 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F G+L V L + F FG I S R+ + D R
Sbjct: 204 TLFAGSLSWGVDDNALYEAFKSFGNIVSARV----VTDKNTGRSRGF------------- 246
Query: 287 AYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK-------- 337
Y+ F SE +T+A A I G + LD A + K +D K+
Sbjct: 247 GYVDFGDSESATKAYEAMQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKRHGDTLSAE 306
Query: 338 --TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+FVGNLPFD + + + Q F + + V +VR+ P KG YV F +
Sbjct: 307 SDTLFVGNLPFDTEQDTVRQFFSEV----AEVASVRLPTDPDSGNLKGFGYVTFNS 358
>gi|392591832|gb|EIW81159.1| hypothetical protein CONPUDRAFT_55890 [Coniophora puteana
RWD-64-598 SS2]
Length = 461
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 99/271 (36%), Gaps = 103/271 (38%)
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKE--------FIKFGEIDSVRIRSVP--IIDTKIP-- 268
E + RTIFVGNLP V +K +++ + +I+S R RSV + +K+P
Sbjct: 46 EQRSSRTIFVGNLPKDVAQKRPLQKQLHKHILSLVPTAKIESSRFRSVAFQVPTSKLPDD 105
Query: 269 ------------------------------------------RKGAILQKQINENADSVH 286
+K A + +Q + ADSV+
Sbjct: 106 SAKPTPTKARQHDKDRAASWRTSSGKDDEKADEKKFLTPAQKKKIAFINQQFHPIADSVN 165
Query: 287 AYIVFKS---------------------EQSTEAALAFNMAVIGGNHIRLDRACPPRKKL 325
AYIVF + + A N + IR+D A P
Sbjct: 166 AYIVFAHPIPASSRPSNLPPLPPVLEPYKAARVAVEKCNGTIFMERMIRVDAAAP----- 220
Query: 326 KGEDAPL--------YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS----------- 366
DA L D + T+FVGNL F+ K++++ F GL E
Sbjct: 221 LSSDASLDKSHATGAGDPRLTIFVGNLDFESKEDDLRVFFEGLVSSERGPPPSETAADSN 280
Query: 367 ----VEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V VR++R ++GKG AYV F RV
Sbjct: 281 AGQWVNRVRIVRDGQTQLGKGFAYVQFADRV 311
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 195 VGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDS 254
V ++KA+ E + K + D+ +TIFVG L V L EF + GE+ S
Sbjct: 278 VANGKRKAEGEAAKPVKKVKVDEAADDSASTKTIFVGKLSWNVDNDWLESEFAECGEVVS 337
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
R+ Q N ++ F S ++ + AL N I G I
Sbjct: 338 ARV-----------------QMDRNTGKSRGFGFVTFASPEAVDKALELNGKEIDGRPIN 380
Query: 315 LDRACPP--------RKKLKGE--DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
+D++ R K G+ AP +FVGNL FD +++++++F
Sbjct: 381 IDKSVEKDQNQVRERRAKAFGDATSAP----SSVLFVGNLSFDATEDQLWEVFSDYG--- 433
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF 389
SV++VR+ KG YV F
Sbjct: 434 -SVKSVRMPTDRESGRPKGFGYVEF 457
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 40/208 (19%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E K E EG + +F+GNL V ++ + +EF +FGE+ VRI
Sbjct: 185 KKRKADEEPAATAKKSKTEEVP-EGAVA-NLFIGNLSWNVDEEWVQREFSEFGELSGVRI 242
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ D + R Y+ + S A+ + G I LD
Sbjct: 243 ----VTDRETGRSRGF-------------GYVEYNSAADAAKAMEAKKGTDLDGRTINLD 285
Query: 317 RACPPRKKLKGED-------------APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDL 363
A P + +G D +P D T+FVGNLPF ++ ++++F
Sbjct: 286 YAAPRQANTQGADRSQDRARSYGDQTSPESD---TLFVGNLPFSATEDALHEVFGA---- 338
Query: 364 ESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ SV +R+ KG YV F +
Sbjct: 339 QGSVLGIRLPTEQETGRPKGFGYVQFSS 366
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 40/205 (19%)
Query: 200 KKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS 259
+KAD+E+E+ + ++ E T+FVG L V + L KEF ++G + + R+
Sbjct: 183 RKADDESEE---QKPQKAAKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARV-- 237
Query: 260 VPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRA 318
I+D + R Y+ F S ++ +AA+A N I G + LD +
Sbjct: 238 --IMDGQSGRSKGF-------------GYVDFDSPEAAKAAVAVNGQKEIDGRMVNLDIS 282
Query: 319 CP-PRKKLKG---EDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
P P + G + A + K+ TVF+GNL F+ ++++ F SS
Sbjct: 283 TPRPAQNNNGFAQQRASNFGDKQSPPSDTVFIGNLSFNATEDDVRNAF-------SSCGE 335
Query: 370 VRVIRHP-HMRVG--KGIAYVLFKT 391
++ +R P M G KG YV F +
Sbjct: 336 IQSVRLPTDMNSGRPKGFGYVTFDS 360
>gi|449296413|gb|EMC92433.1| hypothetical protein BAUCODRAFT_151826 [Baudoinia compniacensis
UAMH 10762]
Length = 465
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 19/174 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I++GNLP K++L +EF+K E + R + + P A + + A
Sbjct: 106 IWIGNLPWSATKESL-REFLK--EQGGIEGREITRVHMPAPNAPAAGDVGVARAKNKGFA 162
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRA--------CPPRKKLKGE---DAPLYDIK 336
Y+ F SE S AL + ++ G + + A P K+++GE D + +
Sbjct: 163 YVDFLSEGSLSKALGASEKLMAGRRVLVKNAKSFEGRPDSKP-KQVEGEGARDGKVKEPA 221
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ VFVGNL FDV E++ + F L VE + + KG A+V FK
Sbjct: 222 RRVFVGNLGFDVTKEDLAEHFS----LAGEVEDIHMATFEDSGKCKGFAWVRFK 271
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 15/194 (7%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA++E E+++ +K EG L F+GNL V ++ L EF +FGE+ VRI
Sbjct: 207 QKRKAEDE-EEVVAPKKTRVEPTEGGNL---FIGNLSWNVDEEWLRSEFEEFGELAGVRI 262
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ D R + D+V A+ K + L + A N DR
Sbjct: 263 ----VTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDR 318
Query: 318 ACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPH 377
A + + +P D T+F+GN+ F + I + F S+ VR+ P
Sbjct: 319 AQSRAQNFGDQKSPESD---TLFIGNIAFSADESMISETFAEYG----SILGVRLPTDPE 371
Query: 378 MRVGKGIAYVLFKT 391
KG YV F +
Sbjct: 372 SGRPKGFGYVQFSS 385
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++IFVG L V L KEF + GE+ S A +Q +
Sbjct: 332 IKSIFVGRLSWNVDNDWLAKEFAECGEVVS-----------------ATVQMDRSTGRSR 374
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP------RKKLKGEDAPLYDIKKT 338
Y+ F + ++ E A+ N I G + +D++ PP K+ K T
Sbjct: 375 GFGYVHFSTSEAVEKAIELNGKEIDGRAVNVDKSNPPNKDASREKRAKTFGDTTSPPSAT 434
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLF 389
+FVGNL F + D+ +++ F S V+ +R P R KG YV F
Sbjct: 435 LFVGNLSFGMNDDALWEAF-------SEHGEVKNVRLPTDRESGRPKGFGYVEF 481
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG L + L EF + G + + R++ L +Q +
Sbjct: 207 IFVGQLSWNIDDDWLKSEFEQLGPVKTARVQ---------------LDRQSGRS--RGFG 249
Query: 288 YIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACP----PRKKLKGEDAPLYDIKKTVFVG 342
Y+ F+S E + +A F I G +R+D + P P K+ K D T+F+G
Sbjct: 250 YVEFESHELAVKAMDQFAGKEIDGRPVRVDLSVPRAPNPEKRAKSFGDQRSDPSNTLFIG 309
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
NL F+ ++ +++ F SVE+VRV KG YV F
Sbjct: 310 NLSFNTNEDRVWEFFGEFG----SVESVRVPTDRETGAPKGFGYVSF 352
>gi|339248069|ref|XP_003375668.1| RNA-binding protein 34 [Trichinella spiralis]
gi|316970928|gb|EFV54781.1| RNA-binding protein 34 [Trichinella spiralis]
Length = 217
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 8/56 (14%)
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
YD K+ VF+GNL FD+ +EEIY F CG ++ +RV+R PH +GKG +
Sbjct: 80 YDKKRAVFLGNLAFDIGEEEIYTHFTDCG------EIDRIRVVRDPHNYIGKGFGF 129
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 15/194 (7%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA++E E+++ +K + EG L F+GNL V ++ L EF +FGE+ VRI
Sbjct: 223 QKRKAEDE-EEVVAPKKTKVEPTEGGNL---FIGNLSWNVDEEWLRSEFEEFGELAGVRI 278
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ D R + D+V A+ K + L + A N DR
Sbjct: 279 ----VTDRDTGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDR 334
Query: 318 ACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPH 377
A + + +P D T+F+GN+ F + I + F S+ VR+ P
Sbjct: 335 AQSRAQNFGDQRSPESD---TLFIGNIAFSADENMISETFAEYG----SILGVRLPTDPE 387
Query: 378 MRVGKGIAYVLFKT 391
KG YV F +
Sbjct: 388 SGRPKGFGYVQFSS 401
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 31/172 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
++IFVG L V L +EF + GE+ S R+ Q N
Sbjct: 297 KSIFVGRLSWNVDNDWLAQEFAECGEVISARV-----------------QMDRNTGKSRG 339
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR--------ACPPRKKLKGEDAPLYDIKK 337
Y+ F + ++ EAAL N I G + +D+ A R + G+ A +
Sbjct: 340 FGYVEFATTEAVEAALLLNGKEIDGRPVNIDKSEQKDKGAAREKRAEKFGDSA--SEPSA 397
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+FVGNL +D +++++++F D++S VR+ KG YV F
Sbjct: 398 VLFVGNLSWDCTEDQVWEVFGEHGDVKS----VRLPTDRETGRPKGFGYVEF 445
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 38/179 (21%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++ ++VG L V + L EF G PI+D ++ I + ++
Sbjct: 357 IKNVYVGGLSWNVDSEWLKSEFESCG----------PIVDARV-----ITDRDTQKSKG- 400
Query: 285 VHAYIVFKSEQSTEAALAF-NMAVIGGNHIRLDRACPPRKKLKGEDAPL---YDIKK--- 337
YI F++ + + A+ N + G +++D + P + E AP D K
Sbjct: 401 -FGYIDFETCEGAQKAIETKNGTELDGRTLKVDLSAP-----RAERAPAENKRDFSKEEL 454
Query: 338 -----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+FVGNLPF + ++++F D+ S VR+ P + KG YV F T
Sbjct: 455 SAESTTLFVGNLPFSATQDSVWEIFAEYGDVNS----VRLPTDPETQRVKGFGYVEFAT 509
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 35/182 (19%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD +TIFVG L V L EF + GEI S + Q
Sbjct: 32 DDGSAPTKTIFVGMLSWNVDNAWLESEFAQCGEIVSAHV-----------------QTDR 74
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP-------PRKKLKGEDAP 331
N ++ F S ++ + AL N I G I +D++ R+ DAP
Sbjct: 75 NTGRSRGFGFVTFASPEAVDKALELNGKEIDGRSINVDKSVEKDQNQVRERRARTFGDAP 134
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVL 388
+ +FVGNL FD +E+++++F S +++ + P R KG YV
Sbjct: 135 -SEPSSRLFVGNLSFDATEEQLWEVF-------SDYGSIKSVHMPTSRDSGRPKGFGYVE 186
Query: 389 FK 390
F+
Sbjct: 187 FE 188
>gi|349806125|gb|AEQ18535.1| putative protein containing rna recognition ( or rnp domain)
[Hymenochirus curtipes]
Length = 110
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+FVGNLP K+ L F +FG I+SVR RSV + + RK A + ++++ +++
Sbjct: 40 VVFVGNLPADFTKQMLKSLFKEFGPIESVRFRSVARAEASLSRKVATIHRKVHPKRKNIN 99
Query: 287 AYIVFKSEQST 297
AY+V+K E S
Sbjct: 100 AYVVYKDEDSA 110
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E K E D+ L FVGNL V ++ L +EF +FGE+ VRI
Sbjct: 207 KKRKAEEEPATNAKKSKTESADNSPNL----FVGNLSWNVDEEWLRREFEEFGELSGVRI 262
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
+ +++ + Y+ + S +AA A A I G I LD
Sbjct: 263 ---------------MTERESGRSRG--FGYVEYADASSAKAAYEAKKDAEIDGRTINLD 305
Query: 317 RACP-------PRKKLKGEDAPLYDI----KKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
A P PR+K + D T+FVGNL F V + + ++F G +
Sbjct: 306 YAKPRDANNQAPREKAQNRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEG----QG 361
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ +R+ KG YV F +
Sbjct: 362 QIQGIRLPTDAETGRPKGYGYVEFSS 387
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 40/181 (22%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF FGE+ VRI + DT R + E ++V A
Sbjct: 287 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 339
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG---------------EDA 330
F++++ E I G I LD A P K +G + +
Sbjct: 340 AKAFEAKKGAE---------IDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQAS 390
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P D T+FVGNLPFD ++ + +LF + S+ +R+ P KG YV +
Sbjct: 391 PESD---TLFVGNLPFDANEDSVGELFG----EKGSILGIRLPTDPDSGRPKGFGYVQYS 443
Query: 391 T 391
+
Sbjct: 444 S 444
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 40/181 (22%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF FGE+ VRI + DT R + E ++V A
Sbjct: 290 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 342
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG---------------EDA 330
F++++ E I G I LD A P K +G + +
Sbjct: 343 AKAFEAKKGAE---------IDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQAS 393
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P D T+FVGNLPFD ++ + +LF + S+ +R+ P KG YV +
Sbjct: 394 PESD---TLFVGNLPFDANEDSVGELFG----EKGSILGIRLPTDPDSGRPKGFGYVQYS 446
Query: 391 T 391
+
Sbjct: 447 S 447
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 39/180 (21%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF +FGE+ VRI + DT R + E ++V A
Sbjct: 197 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 249
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG--------------EDAP 331
F++++ TE I G I LD A P ++ G + +P
Sbjct: 250 AKAFEAKRDTE---------IDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASP 300
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D T+FVGN+PF ++ ++++F + S+ +R+ P KG YV F +
Sbjct: 301 ESD---TLFVGNIPFSANEDSLHEVFG----QKGSILGIRLPTDPESGRPKGFGYVQFSS 353
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 39/180 (21%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF +FGE+ VRI + DT R + E ++V A
Sbjct: 282 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 334
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG--------------EDAP 331
F++++ TE I G I LD A P ++ G + +P
Sbjct: 335 AKAFEAKRDTE---------IDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASP 385
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D T+FVGN+PF ++ ++++F + S+ +R+ P KG YV F +
Sbjct: 386 ESD---TLFVGNIPFSANEDSLHEVFG----QKGSILGIRLPTDPESGRPKGFGYVQFSS 438
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 15/194 (7%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA++E E+++ +K + EG L F+GNL V ++ L EF +FGE+ VRI
Sbjct: 223 QKRKAEDE-EEVVAPKKTKVEPTEGGNL---FIGNLSWNVDEEWLRSEFEEFGELAGVRI 278
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ D R + D+V A+ K + L + A N DR
Sbjct: 279 ----VTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDR 334
Query: 318 ACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPH 377
A + + +P D T+F+GN+ F + I + F S+ VR+ P
Sbjct: 335 AQSRAQNFGDQRSPESD---TLFIGNIAFSADENMISETFAEYG----SILGVRLPTDPE 387
Query: 378 MRVGKGIAYVLFKT 391
KG YV F +
Sbjct: 388 SGRPKGFGYVQFSS 401
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E E K E + G L F+GNL V ++ L +EF +FGE+ VRI
Sbjct: 221 KKRKADEEPEQSPKKAKTEDPNVTGNL----FIGNLSWNVDEEWLTREFEEFGELKGVRI 276
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
I D R Y+ F++ + AL A N A + IRLD
Sbjct: 277 ----ITDRDSGRSKGF-------------GYVEFENAEDAAKALEAKNGAELDNRAIRLD 319
Query: 317 RACPPRKKLK-------------GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDL 363
+ P + + G+ A + +T+FVGNL FD ++ + + F +
Sbjct: 320 FSVPRQNNAQNPQQRGQERRQQYGDKA--SEPSQTLFVGNLSFDATEDMVREYF----EE 373
Query: 364 ESSVEAVRVIRHPHMRVGKGIAYV 387
S+ +R+ KG YV
Sbjct: 374 HGSINGIRLPTDRESGAPKGFGYV 397
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 12/195 (6%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K +K E++++ V +K + DE +FVGNL V ++ L EF FGE+ VRI
Sbjct: 237 KSQKRKAESDEVPVTKKAKKDSDESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRI 296
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL-D 316
+ D R + D+ A+ K + L + A N D
Sbjct: 297 ----VTDRDSGRSRGFGYVEFTNAEDAAKAFEAKKGAELDGRPLNLDYANARQNAGGAKD 352
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHP 376
R+ K + +P D T+F+GN+ F + I + F ++ +R+ P
Sbjct: 353 RSQARAKSFGDQTSPESD---TLFIGNISFGADENAIQETFSSYG----TISGIRLPTDP 405
Query: 377 HMRVGKGIAYVLFKT 391
KG Y+ F +
Sbjct: 406 ESGRPKGFGYIQFSS 420
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 27/174 (15%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G+ +++IFVG L V + L EF + GE+ S R++ + +Q ++
Sbjct: 268 GEEVKSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQ---------------MDRQTGKS 312
Query: 282 ADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-----PRKKLKGEDAPLYDI 335
Y+ F S + A+ N I G + LD A P P ++ K +
Sbjct: 313 KG--FGYVEFADAASAKKAVETMNGREIDGRPVNLDLATPRGPPNPERRAKAFGDSRSEP 370
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
T+FVGNL F + +Y+LF + ++ + VR+ KG YV F
Sbjct: 371 SATLFVGNLAFSATQDAVYELFGAVGEVVN----VRLPTDRDSGQPKGFGYVEF 420
>gi|357485153|ref|XP_003612864.1| RNA-binding protein [Medicago truncatula]
gi|355514199|gb|AES95822.1| RNA-binding protein [Medicago truncatula]
Length = 518
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 8 EDNNISAPSSIFTTLFGGIPNESTVAS---SLFSDSNPFKRQHRESQSAEN 55
+++ +SAPSSIF TLF P ++T A+ SLFSD NP+KR+ ++ S EN
Sbjct: 14 QNDTVSAPSSIFNTLFANAPEQTTAAADTVSLFSDDNPYKRKPNQTLSPEN 64
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E E+ K E G L FVGNL V ++ L +EF +FG I +VR+
Sbjct: 229 KKRKAEAEPEETSKKTKTEDPAATGNL----FVGNLSWNVDEEWLTREFEEFGAIKAVRV 284
Query: 258 RSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL 315
I D R KG + Y+ F+S AL A + + +R+
Sbjct: 285 ----ITDRDSGRSKG--------------YGYVEFESADDAAKALEARHGYTLDNRELRV 326
Query: 316 DRACPPRKKLKGE--------------DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN 361
D P ++ G+ D P T+FVGN+ FD + + ++F
Sbjct: 327 DLGTPRAQRNDGQTPQQRSNDRQKQYGDTP-SQPSATLFVGNISFDATQDMVTEVFQEYG 385
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
S+ AVR+ KG YV F +
Sbjct: 386 ----SINAVRLPTDRETGAPKGFGYVEFSS 411
>gi|226291029|gb|EEH46457.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 38/182 (20%)
Query: 190 GKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLR---------TIFVGNLPLKVKKK 240
G+ V +++ T ++ +GF D +LR TI++GNL +V
Sbjct: 38 GQVTNVAFQQRWNSQYTPSIVRRTGIQGFRDNTSILRSNPEVKPNETIYIGNLFFEVTAD 97
Query: 241 TLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA 300
L ++ KFG I +VRI + D++ +G AY+ F S + EAA
Sbjct: 98 DLKRDLSKFGNILAVRI----VYDSRGMSRG--------------FAYVQFDSIDAAEAA 139
Query: 301 L-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPL----YDIKKTVFVGNLPFDVKDEEIYQ 355
+ NM + G + ++ + +G P + +T+F+GNL F++ D E+ +
Sbjct: 140 INEMNMTIYEGRRVVVNYSS------RGSANPTPTRSNEPTRTLFIGNLSFEMSDRELNE 193
Query: 356 LF 357
LF
Sbjct: 194 LF 195
>gi|219115479|ref|XP_002178535.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410270|gb|EEC50200.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 269
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
+L RT+FV +P + + K F + G D V R +P+ +G
Sbjct: 61 QLDRTVFVEGIPYTCTPQEVKKFFTENGVEDIVECR-LPVWQDTGRLRG----------- 108
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKK------LKGEDAPLYDIK 336
+ ++VF +++S + AL N + ++ + A P+ L +D+
Sbjct: 109 ---YGHVVFDTKESQQTALQLNGKYLQNRYLTIQAANAPKTSQAQVPSLNSDDSKP---S 162
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
KTV + NL +D + +I ++ + + VRV+RH + KG AYV F++
Sbjct: 163 KTVMLNNLSYDASESDIQRVMEAYGAIATG--GVRVVRHSQSQRSKGFAYVEFES 215
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E K E D +F+GNL V ++ L +EF +FGE+ VRI
Sbjct: 226 KKRKADEEPAAAAKKSKTE--DAPEGASANLFIGNLSWNVDEEWLQREFSEFGELSGVRI 283
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ D + R Y+ + S A+ + G I LD
Sbjct: 284 ----VTDRESGRSRGF-------------GYVEYTSAADAAKAMEAKKGTDLDGRTINLD 326
Query: 317 RACP----PRKKLKGEDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSV 367
A P P++ + A Y + T+FVGNLPF ++ ++++F SV
Sbjct: 327 YAAPRQANPQQDRTQDRARSYGDQTSPESDTLFVGNLPFSATEDALHEVFGA----HGSV 382
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKT 391
+R+ KG YV F +
Sbjct: 383 LGIRLPTEQETGRPKGFGYVQFSS 406
>gi|291224886|ref|XP_002732430.1| PREDICTED: splicing factor 3b, subunit 4-like [Saccoglossus
kowalevskii]
Length = 388
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEALLWELFLQSG----------PVVNTHMPKDRVTQQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM I G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKIYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPESGNSKGYAFINFAS 151
>gi|156055150|ref|XP_001593499.1| hypothetical protein SS1G_04926 [Sclerotinia sclerotiorum 1980]
gi|154702711|gb|EDO02450.1| hypothetical protein SS1G_04926 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH- 286
++VGNLP V K+ L K F++F +++ I I P G K + VH
Sbjct: 175 VWVGNLPWSVSKEELRKWFVEFSDLEEENITR---IHMPGPNDGKPANKVEKKFGKPVHN 231
Query: 287 ---AYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKLKGEDAPLYDIKKT 338
AY+ F +E+ + A+ + ++ G + + P +K+ E P K
Sbjct: 232 KGFAYVDFATEEQVKMAVELSEQLLTGRRLLIKDNKSFEGRPEKKEAVIEGKPP---SKK 288
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+FVGNL FD +E + + F CG ++E + V KG A+++F
Sbjct: 289 IFVGNLRFDATEEILKEHFEKCG------AIEKIHVATFEDSGKCKGYAWIVF 335
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 40/181 (22%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF FGE+ VRI + DT R + E ++V A
Sbjct: 3 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 55
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG---------------EDA 330
F++++ E I G I LD A P K +G + +
Sbjct: 56 AKAFEAKKGAE---------IDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQAS 106
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P D T+FVGNLPFD ++ + +LF + S+ +R+ P KG YV +
Sbjct: 107 PESD---TLFVGNLPFDANEDSVGELFG----EKGSILGIRLPTDPDSGRPKGFGYVQYS 159
Query: 391 T 391
+
Sbjct: 160 S 160
>gi|156600447|gb|ABU86408.1| cleavage stimulation factor, partial [Clonorchis sinensis]
Length = 260
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 287 AYIVFKSEQSTEAALAFNMAVI---------------GGNHIRLDRACPPRKKLKGEDAP 331
AY+V S A L+ N + G HIR+DRA R P
Sbjct: 10 AYVVLTSTAGIPAGLSLNGHWLQTKPISTDTPTDYQSSGKHIRVDRALRHR--------P 61
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ K++VF+GNLPFDV++EE+ + + VR+IR KG +V +
Sbjct: 62 VEQFKQSVFLGNLPFDVQEEEVRSAMSKFGPIAN----VRLIRDKETGAVKGFGFVQY 115
>gi|452846802|gb|EME48734.1| hypothetical protein DOTSEDRAFT_67685 [Dothistroma septosporum
NZE10]
Length = 386
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 29/137 (21%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNL +V L EF +FGE+ + R+ + D + KG
Sbjct: 205 LYVGNLFFEVTTPQLEAEFSRFGEVANARV----VQDGRGLSKG--------------FG 246
Query: 288 YIVFKSEQSTEAALAFNMAVIGGN------HIRLDRACPPRKKLK-GEDAPLYDIKKTVF 340
YI F ++ + ALA + V G H+R D P R+ + +AP KT+F
Sbjct: 247 YIEFTRQEDADNALALDQKVFQGRRMAVQYHVRRDNTQPRRQDFRTSTNAP----SKTLF 302
Query: 341 VGNLPFDVKDEEIYQLF 357
+GN+ + + D ++ LF
Sbjct: 303 IGNMSYQMSDRDLNDLF 319
>gi|302498397|ref|XP_003011196.1| RNA binding protein Rnp24, putative [Arthroderma benhamiae CBS
112371]
gi|291174745|gb|EFE30556.1| RNA binding protein Rnp24, putative [Arthroderma benhamiae CBS
112371]
Length = 398
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 219 DDEGKLLRT---IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAI 273
+D K RT +++GNLP ++TL + F+ K G +DS +I V I D+ RKG
Sbjct: 79 NDSNKKQRTGFGVWIGNLPFTATRETL-RTFLMSKSGILDS-QITRVHIPDSGTKRKGVK 136
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
K AY+ F S++ E A+A + ++GG + + A ++ E A
Sbjct: 137 QNKGF--------AYVDFTSQEIVERAIALSEELVGGRRVLIKDATNFDGRVVKE-ADGD 187
Query: 334 DIKKT--------VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKG 383
D+K +FVGNL FD E + + F CG S+ + V KG
Sbjct: 188 DLKAAGGNPPSTKIFVGNLSFDTTKEHLEEHFSPCG------SISNIHVATFEDSGKCKG 241
Query: 384 IAYVLFKT 391
A+V F++
Sbjct: 242 YAWVEFES 249
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+I+VGNL + ++ + +EF FG I SV I S D + KG
Sbjct: 232 SIYVGNLLFDITQEDIQREFESFGPIKSVTIAS----DNRGLSKG--------------F 273
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F+S EQ+T A N AV+ G + ++ ++ G + P+ + KT+F+GNL
Sbjct: 274 GYVEFESIEQATAAIEGKNQAVLEGRRLVVNYMNKSQRSPAGAE-PVNEPSKTLFIGNLA 332
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F++ D ++ +LF D+ + ++ VRV +G A+ F
Sbjct: 333 FEMSDADLNKLF---RDIRNVID-VRVAIDRRTGQPRGFAHADF 372
>gi|196007894|ref|XP_002113813.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
gi|190584217|gb|EDV24287.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
Length = 291
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL KV + L + F++ G P+++ +P K I Q A +
Sbjct: 14 TIYVGNLDEKVSETLLWELFLQAG----------PVVNVHMP-KDRITQ------AHQGY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F E + A+ NM + G IR+++A K L D+ VF+GNL
Sbjct: 57 GFIEFLGEDDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++++Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKQLYDTFSAFGVI---LQTPKIMRDPETGQSKGFAFINFAS 151
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 83/208 (39%), Gaps = 46/208 (22%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E K E +EG+ T+FVGNL V L EF F + R+
Sbjct: 141 KKRKADDEEPAAAKKAKTE---EEGETSSTLFVGNLSWNVDDSVLYDEFKGFDGLTGARV 197
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
I D + R Y+ F S + +AA + G +++D
Sbjct: 198 ----ITDRETQRSRGF-------------GYVEFDSVEHAQAAFDKMTGYFLDGRELKID 240
Query: 317 ----RA-------CPPRKKLKGE-DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
RA R K G+ +P D T+FVGNL FD +E + F
Sbjct: 241 FSTGRAKSNDANPAASRAKKYGDVTSPESD---TLFVGNLSFDADEETVSAFF------- 290
Query: 365 SSVEAVRVIRHP-HMRVG--KGIAYVLF 389
S V V+ +R P M G KG YV F
Sbjct: 291 SEVANVKSLRLPTDMESGRPKGFGYVSF 318
>gi|378729012|gb|EHY55471.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 392
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I++GNL K+ L+K F E IR+ I +P+ K N+ A
Sbjct: 107 IWIGNLAFSTTKEDLLKFFT---ENSKNVIRNDQITRIHLPQGQPKFGKPTNKG----FA 159
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRA-----CPPRKKL-KGEDAPLYDIKKTVFV 341
YI F E + + AL F+ ++GG + + A P KK GE P K +FV
Sbjct: 160 YIDFSDEATLQTALEFSEGLLGGRRVLIKNAKDFEGRPESKKADAGEARP---PSKRIFV 216
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV------GKGIAYVLF 389
GNL FD + DLE A I H HM KG A++ F
Sbjct: 217 GNLDFDTT----------VEDLEEHFGACGPIVHTHMATFEDTGKCKGFAWIDF 260
>gi|302653686|ref|XP_003018666.1| RNA binding protein Rnp24, putative [Trichophyton verrucosum HKI
0517]
gi|291182325|gb|EFE38021.1| RNA binding protein Rnp24, putative [Trichophyton verrucosum HKI
0517]
Length = 398
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 219 DDEGKLLRT---IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAI 273
+D K RT +++GNLP ++TL + F+ K G +DS +I V I D+ RKG
Sbjct: 79 NDSNKKQRTGFGVWIGNLPFTATRETL-RTFLTSKSGILDS-QITRVHIPDSGTKRKGVK 136
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
K AY+ F S++ E A+A + ++GG + + A ++ E A
Sbjct: 137 QNKGF--------AYVDFTSQEIVERAIALSEELVGGRRVLIKDATNFDGRVVKE-ADGD 187
Query: 334 DIKKT--------VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKG 383
D+K +FVGNL FD E + + F CG S+ + V KG
Sbjct: 188 DLKTAGGNPPSTKIFVGNLSFDTTKEHLEEHFSPCG------SISNIHVATFEDSGKCKG 241
Query: 384 IAYVLFKT 391
A+V F++
Sbjct: 242 YAWVEFES 249
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 30/166 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V L + F++ G + +V SVP + ++ N +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPVRTV---SVP-------------RDKLTGNHQG-Y 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E + AL NM + G +RL+++ R+ +D+ VF+GNL
Sbjct: 73 GFVEFRNEVDADYALKLMNMVKLYGKALRLNKSAQDRRN--------FDVGANVFLGNLD 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ IY F ++ S+ +++R P + +G +V F T
Sbjct: 125 PDVDEKTIYDTFSAFGNIISA----KIMRDPETGLSRGFGFVSFDT 166
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 86/203 (42%), Gaps = 35/203 (17%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E K E +D G + +FVGNL V + L++EF +FGEI R+
Sbjct: 270 KKRKADDEVAAPAKKTKTETAEDTGS--KNLFVGNLSWNVDDEWLMREFEEFGEISGARV 327
Query: 258 RSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFKSEQSTEAALAFNM-AVIGGNHIRL 315
I D + R KG Y+ F S S AAL ++I G +
Sbjct: 328 ----ISDRESGRSKG--------------FGYVEFTSSASAAAALKAKKGSLIDGREANV 369
Query: 316 DRA-----CPPRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D + PP+ + +G A D T+F+GNL FD + + + F +
Sbjct: 370 DFSTPRSDAPPKDRAQGRAAAFGDSTNPPSDTLFLGNLSFDADENTVGEAFG----EHGT 425
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
V VR+ KG YV F
Sbjct: 426 VVNVRLPTDQETGNPKGFGYVTF 448
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 30/166 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V L + F++ G + +V SVP + ++ N +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPVRTV---SVP-------------RDKLTGNHQG-Y 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E + AL NM + G +RL+++ R+ +D+ VF+GNL
Sbjct: 73 GFVEFRNEVDADYALKLMNMVKLYGKALRLNKSAQDRRN--------FDVGANVFLGNLD 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ IY F ++ S+ +++R P + +G +V F T
Sbjct: 125 PDVDEKTIYDTFSAFGNIISA----KIMRDPETGLSRGFGFVSFDT 166
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 30/166 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V L + F++ G + +V SVP + ++ N +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPVRTV---SVP-------------RDKLTGNHQG-Y 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E + AL NM + G +RL+++ R+ +D+ VF+GNL
Sbjct: 73 GFVEFRNEVDADYALKLMNMVKLYGKALRLNKSAQDRRN--------FDVGANVFLGNLD 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ IY F ++ S+ +++R P + +G +V F T
Sbjct: 125 PDVDEKTIYDTFSAFGNIISA----KIMRDPETGLSRGFGFVSFDT 166
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 32/202 (15%)
Query: 198 KRKKADNETEDMLVHRKEEG----FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEID 253
KRK AD++ + E G + + + +FVG L V L EF GEI+
Sbjct: 295 KRKAADDDEPSTKKVKLENGSAAPAGGDAQQSKAVFVGQLSWNVDNDWLASEFASCGEIE 354
Query: 254 SVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHI 313
S A +Q N Y+ F + ++ + AL N I I
Sbjct: 355 S-----------------ATVQMDRNTGKSRGFGYVHFTTVEAAQKALELNGKEIDNRPI 397
Query: 314 RLDRACP--PRKKLKGEDAPLYDI----KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSV 367
++D + P P + D+ T+FVGNL F+ ++ ++ LF ND V
Sbjct: 398 KVDISTPRNPDAARQKRAQTFGDVTSPPSNTLFVGNLSFNTSEDSVWSLF---NDY--GV 452
Query: 368 EAVRVIRHPHMRVGKGIAYVLF 389
++VR+ KG YV F
Sbjct: 453 KSVRLPTDRESGRPKGFGYVEF 474
>gi|297816826|ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322134|gb|EFH52555.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 31/183 (16%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKI-PRKGAILQKQ 277
+++G + + ++VG +P + + + F G I V D K+ P GA
Sbjct: 156 EEDGVVPKKLYVGGIPYQSTEDEIRSYFRSCGVITKV--------DCKMRPEDGAF---- 203
Query: 278 INENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR----ACP--PRKKLKGEDAP 331
S A+I F++E + ALAF+ A +G + + + P PR+K AP
Sbjct: 204 ------SGIAFITFETEDGAKRALAFDRAAMGDRFLTIQQYVKTTTPFVPRRKTSSGFAP 257
Query: 332 -LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ D V++GNL +D + +I +LF + + +VR+ ++ KG A+V FK
Sbjct: 258 EMVDGYNRVYIGNLAWDTTERDIRKLF-----SDCVINSVRLGKNKETGEFKGYAHVDFK 312
Query: 391 TRV 393
V
Sbjct: 313 DSV 315
>gi|239613287|gb|EEQ90274.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis ER-3]
Length = 419
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP VKK + F G + + I T+I I Q +N A
Sbjct: 83 VWIGNLPFNVKKDDVRVFFTSSGSLKNEEI-------TRIHLPEGIKQNGKPQNKG--FA 133
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKG---EDAPLYDIKK 337
Y+ F ++++ EAA+A + +I G + R P+ + G ++ ++ K
Sbjct: 134 YVDFTTQKAMEAAIAMSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSK 193
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
VFVGNL FDV E + + F CG+ +E+++V KG A+V F++
Sbjct: 194 RVFVGNLGFDVTKEILEEHFKPCGV------IESIQVATFQDTGKCKGYAWVEFES 243
>gi|290999559|ref|XP_002682347.1| predicted protein [Naegleria gruberi]
gi|284095974|gb|EFC49603.1| predicted protein [Naegleria gruberi]
Length = 204
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 28/166 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVGNL +V ++ L + F++ G P++D KIPR N S +
Sbjct: 7 TIFVGNLDQQVDEELLWELFVQMG----------PVVDAKIPRDRIT-------NTHSGY 49
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL- 344
A++ FK E A+ N + G ++L+R + + A D+ ++VGNL
Sbjct: 50 AFVEFKHEHDANYAIQVMNQIKLFGRPMKLNRYD------QDKSAKNLDVGANLWVGNLD 103
Query: 345 PFDVKDEEIY-QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
P V DE I +LF + + R+ R P KG A+V +
Sbjct: 104 PVGVSDEGILRELFGQFGVMIQNTP--RIQRDPETMESKGFAFVSY 147
>gi|261188487|ref|XP_002620658.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis SLH14081]
gi|239593142|gb|EEQ75723.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis SLH14081]
Length = 419
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP VKK + F G + + I T+I I Q +N A
Sbjct: 83 VWIGNLPFNVKKDDVRVFFTSSGSLKNEEI-------TRIHLPEGIKQNGKPQNKG--FA 133
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKG---EDAPLYDIKK 337
Y+ F ++++ EAA+A + +I G + R P+ + G ++ ++ K
Sbjct: 134 YVDFTTQKAMEAAIAMSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSK 193
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
VFVGNL FDV E + + F CG+ +E+++V KG A+V F++
Sbjct: 194 RVFVGNLGFDVTKEILEEHFKPCGV------IESIQVATFQDTGKCKGYAWVEFES 243
>gi|326478575|gb|EGE02585.1| RNA binding protein Rnp24 [Trichophyton equinum CBS 127.97]
Length = 390
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 219 DDEGKLLRT---IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAI 273
+D K RT +++GNLP ++ +++ F+ K G +DS +I V I D+ RKG
Sbjct: 81 NDSNKKQRTGFGVWIGNLPFTATRE-MLRTFLTSKSGILDS-QITRVHIPDSGTKRKGVK 138
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
K AY+ F S++ E A+A + ++GG + + A ++ E A
Sbjct: 139 QNKGF--------AYVDFTSQEIVERAIALSEELVGGRRVLIKDATNFEGRVVKE-ADRD 189
Query: 334 DIKKT--------VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKG 383
D+K +FVGNL FD E + + F CG S+ + V KG
Sbjct: 190 DLKTAGGNPPSTKIFVGNLSFDTTKEHLEEHFSPCG------SISNIHVATFEDSGKCKG 243
Query: 384 IAYVLFKT 391
A+V F++
Sbjct: 244 YAWVEFES 251
>gi|384250449|gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 358
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +++ ++ + + F++ G P+++ +P+ Q Q +
Sbjct: 30 TVYVGNLDVQLSEELVWELFVQSG----------PVVNVYLPKDRVTSQHQ-------GY 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FKSE + A+ NM + G IR+++A +D D+ +F+GN+
Sbjct: 73 GFVEFKSEDDADYAIKILNMIKVYGKPIRVNKAS--------QDKKTQDVGANLFIGNID 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ +Y F + ++ +++R P KG +V + +
Sbjct: 125 PDVDEKLLYDTFSAFGMI---IQTPKIMRDPETGATKGFGFVSYDS 167
>gi|56755563|gb|AAW25960.1| SJCHGC01449 protein [Schistosoma japonicum]
Length = 152
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ +Q Q +
Sbjct: 14 TIYVGGLDEKVNESILWELFLQAG----------PVVNVHMPKDRINMQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G IR+++A +K L DI +F+GNL
Sbjct: 57 GFVEFMTEEDADYAMRIMNMIKLYGKPIRVNKASANQKNL--------DIGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+V ++ +Y F + ++ +++R P KG A++ F R
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGYAFINFAFR 152
>gi|324505664|gb|ADY42430.1| Cytoplasmic polyadenylation element-binding protein 1 [Ascaris
suum]
Length = 358
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 28/211 (13%)
Query: 195 VGEKRKKADNETEDMLVHRKEEG--FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+G + D + E VH G E R IF+G +P V + T+ F KFGE+
Sbjct: 125 MGMTNETGDRDAEGEKVHSSPFGCYMQPEEIYSRKIFIGGVPTDVTQDTVRATFSKFGEL 184
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNH 312
ID P G+ L++ + + +I++ E+S + ++ + G +
Sbjct: 185 ---------FIDWPKPSNGSTLKR--GGDCPLGYLFIIYMEERSVQKLMSSCYQMDGKAY 233
Query: 313 IRLDRACPPRKKLKGEDAPLYDIK------------KTVFVGNLPFDVKDEEIYQLFCGL 360
+ + +K ++ L DIK +TVF+G +P + EE+ + GL
Sbjct: 234 LLMSSQTVKQKPVEVRPWRLSDIKYEPYSDLQIDTLRTVFIGAMPRPTRAEELADVLSGL 293
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V + P +R KG A V F T
Sbjct: 294 F---GPVCYACIHVDPELRYPKGAARVTFAT 321
>gi|225679309|gb|EEH17593.1| nucleic acid-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 960
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 38/182 (20%)
Query: 190 GKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLR---------TIFVGNLPLKVKKK 240
G+ V +++ T ++ +GF D +LR TI++GNL +V
Sbjct: 725 GQVTNVAFQQRWNSQYTPSIVRRTGIQGFRDNTSILRSNPEVKPNETIYIGNLFFEVTAD 784
Query: 241 TLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA 300
L ++ KFG I +VRI + D++ +G AY+ F S + EAA
Sbjct: 785 DLKRDLSKFGNILAVRI----VYDSRGMSRG--------------FAYVQFDSIDAAEAA 826
Query: 301 L-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPL----YDIKKTVFVGNLPFDVKDEEIYQ 355
+ NM + G + ++ + +G P + +T+F+GNL F++ D E+ +
Sbjct: 827 INEMNMTIYEGRRVVVNYSS------RGSANPTPTRSNEPTRTLFIGNLSFEMSDRELNE 880
Query: 356 LF 357
LF
Sbjct: 881 LF 882
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 26/169 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVG L V L +EF GE+ S R+ Q N
Sbjct: 321 KTVFVGRLSWNVDNDWLAQEFADCGEVVSARV-----------------QMDRNTGKSRG 363
Query: 286 HAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACP----PRKKLKGEDAPLYDIKKTVF 340
++ F + + AA+A N I G + LD+ P ++ K +F
Sbjct: 364 FGFVEFATAEGANAAVALNGQKEIDGRAVNLDKTSAKPADPERRAKAFGDSTSAPSSVLF 423
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
VGN+ FD+ ++ ++++F +++S VR+ + KG YV F
Sbjct: 424 VGNVSFDMTEDGLWEVFAEYGEVKS----VRLPTDRDTQRLKGYGYVEF 468
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 27/167 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +F+ NL + + L +F K GE+ VRI + + KG
Sbjct: 601 RKVFISNLLFSITEDHLRDKFSKLGEVLDVRI----VKNMAGRSKG-------------- 642
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+ F +E + +AALA + + G + + K P K T+FV NLP
Sbjct: 643 YAYVEFNNESTVQAALAMDREKMEGRPMFISPCVDKAKNPTTFKFPTSLDKHTLFVSNLP 702
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFK 390
FD K+ EI +LF S V+ +R R G KG YV ++
Sbjct: 703 FDAKESEIEELF-------SKHGVVKQVRLVTNRAGKPKGYGYVEYE 742
>gi|348684961|gb|EGZ24776.1| hypothetical protein PHYSODRAFT_484926 [Phytophthora sojae]
Length = 209
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ L + ++ G + +V +PR Q +
Sbjct: 13 TVYVGNLDDRVTEELLWELMLQAGSVCNVH----------MPRDKVTGSHQ-------NY 55
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E+ E A+ NM + G IR+ +A RK L D+ +F+GNL
Sbjct: 56 GFVEFRTEECAEYAVKVLNMVQLFGKAIRVKKASSDRKNL--------DVGANLFLGNLD 107
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+V ++ +Y F + +E +++R P + +G +V F
Sbjct: 108 PEVDEKLLYDTFSAFGGI---IETPKIMRDPDTKASRGFGFVSF 148
>gi|302688687|ref|XP_003034023.1| hypothetical protein SCHCODRAFT_52873 [Schizophyllum commune H4-8]
gi|300107718|gb|EFI99120.1| hypothetical protein SCHCODRAFT_52873 [Schizophyllum commune H4-8]
Length = 626
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 93/267 (34%), Gaps = 99/267 (37%)
Query: 226 RTIFVGNLPLKVK-KKTLIKEF-------IKFGEIDSVRIRSVPIIDTKIPRKGA----- 272
RT+FVGN+P++V KK LIK + +S+R RSVP+ I + A
Sbjct: 177 RTLFVGNVPVEVMGKKPLIKSLQRHLLSAVPNARAESIRFRSVPVPRDAIAKAAAKGRQD 236
Query: 273 ------------------------------------------ILQKQINENADSVHAYIV 290
+ + E A+SV AY+V
Sbjct: 237 VRSSTNHANTRTSAWRANQNDDDDATALAKTYLTPAEKKRIAAITGDLGEKANSVTAYLV 296
Query: 291 F-------------KSEQSTEAALAFNMAVIG----GNHIRLDRACPPRKKLKGED---- 329
+ +AA+ + G G +R+D A E
Sbjct: 297 LAHPAPRPANLPPLPTADPYQAAIQIAAKMDGVEWEGRALRVDLARRDPATTIAETPVDL 356
Query: 330 -APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA------------------- 369
A L D K+T+FVGNL + K++++ F ND E EA
Sbjct: 357 TALLPDPKRTLFVGNLDYGAKEDDVRAFFEAENDEEEGSEAGSDAEETETPAKPSSTTHH 416
Query: 370 ---VRVIRHPHMRVGKGIAYVLFKTRV 393
VR++R VGKG AYV F R
Sbjct: 417 VSRVRIVRDSSTGVGKGFAYVQFVDRT 443
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR---KGAILQKQINE 280
L R++FV LP + + F G I+++ K+PR G I+
Sbjct: 22 LKRSVFVSGLPYSADTDAIKEYFQNCGTIENI----------KLPRYQDTGKIIG----- 66
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ ++VF + + + A+ N V+ G ++ + A +K D + T+F
Sbjct: 67 -----YCHLVFSTPEEAQEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAPEDCTTIF 121
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
V NL FD ++E+ + F CG V VR + H + KG A++ FK
Sbjct: 122 VKNLAFDCTEDEVGEFFEKCG------KVVNVRFVYHYSQKHFKGFAFIEFK 167
>gi|407921246|gb|EKG14398.1| hypothetical protein MPH_08387 [Macrophomina phaseolina MS6]
Length = 1116
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + ++ + K F GEI SVR S+ + N
Sbjct: 720 TLFVTNYPPEADEEYIRKLFKAHGEIISVRFPSLKL------------------NTHRRF 761
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F + Q EAA A + +G N + P K + P+Y+ + VFVGN+
Sbjct: 762 CYVTFGNAQQAEAASKAMHGKSVGRNLMLTAEISDPSIKDR-RHGPIYE-GREVFVGNVD 819
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V D+E+ L L+ + VRV R+ R GKG+A+V F T
Sbjct: 820 MSVTDQEVQDLVSSLDGFVN----VRVPRNLGGR-GKGVAFVEFDT 860
>gi|427776813|gb|JAA53858.1| Putative rna-binding protein sart3 rrm superfamily [Rhipicephalus
pulchellus]
Length = 936
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 31/172 (18%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D K +RT+F+ NL V++ + + F + GEI+ +R+ + D K KG
Sbjct: 660 DPLKEIRTVFLSNLAYDVEESQIEEAFKEVGEIEELRL----VRDYKGRSKG-------- 707
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
Y+VF QS EAAL + + G + + + C R + + K +
Sbjct: 708 ------FGYLVFTHMQSVEAALKRDRTPVNGRPVFVSK-CNERNQFRFRTGM---EKNKL 757
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI--RHPHMRVGKGIAYVLF 389
FV +PF V ++E+ +LF +L + VR++ R+ H KGIAYV +
Sbjct: 758 FVKGIPFSVTEKELEELFGKYGEL----KGVRLVTYRNGH---SKGIAYVEY 802
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
gi|297332018|gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL ++ ++ L + F++ G P+++ +P+ N +
Sbjct: 26 TVYVGNLDAQLSEELLWELFVQAG----------PVVNVYVPKDRVT-------NLHQNY 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I ++SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 69 GFIEYRSEEDADYAIKVLNMIKVHGKPIRVNKASQDKKSL--------DVGANLFIGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ +Y F + S+ +++R P +G ++ + +
Sbjct: 121 PDVDEKLLYDTFSAFGVIASN---PKIMRDPDTGNSRGFGFISYDS 163
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F K G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGKMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK--TVFVG 342
+A+I + + Q+ AL A N V I+++ A P + P DI +FVG
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRVFLDKEIKVNWATSPG------NTPKTDISSHHHIFVG 100
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+L +++ E + + F ++ + R++R PH KG A+V F
Sbjct: 101 DLSPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 30/166 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V L + F++ G VR SVP + ++ N +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGP---VRTVSVP-------------RDKLTGNHQG-Y 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E + AL NM + G +RL+++ R+ +D+ +F+GNL
Sbjct: 73 GFVEFTNEVDADYALKLMNMVKLYGKSLRLNKSAQDRRN--------FDVGANIFLGNLD 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ IY F ++ ++ +++R P + +G +V F T
Sbjct: 125 PDVDEKTIYDTFSTFGNILTA----KIMRDPETGISRGFGFVSFDT 166
>gi|428161292|gb|EKX30760.1| hypothetical protein GUITHDRAFT_123023 [Guillardia theta CCMP2712]
Length = 209
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 33/165 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGN+ K ++ L + F++ G P+++ IPR + +VH
Sbjct: 16 TIYVGNITEKCTEEILWELFLQAG----------PVVNVHIPR----------DKVTTVH 55
Query: 287 A---YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
+ ++ F+SE+ E A+ NM + G +RL+ KK GE L D+ +F+G
Sbjct: 56 SGFGFVEFRSEEDAEYAIKIMNMIKLHGQPLRLN------KKASGEIKVL-DVGANLFIG 108
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
NL +V ++ +Y F + + + +R P KG A+V
Sbjct: 109 NLEPEVDEKLLYDTFSAFGVIVGNTP--KCMRDPETGQSKGFAFV 151
>gi|225685148|gb|EEH23432.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226294474|gb|EEH49894.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 441
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 34/183 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP KK + K G + + I + + D GA KQ + + A
Sbjct: 97 VWVGNLPFTAKKSDIRKFLTGSGTLSNEDITRIHLPD------GA---KQNGKAQNKGFA 147
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKKLKGEDA------------- 330
Y+ F + ++ E A+A + +I G + A P + GE A
Sbjct: 148 YVDFSTSKAMETAIAMSEQLINGRRALIKNAKSYAGRPERTKGGESAAGGRGVNNSSMAA 207
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
P + + +FVGNL FDV E + + F CG S+E+V V KG A+V
Sbjct: 208 PGKEPSQRIFVGNLGFDVTKEILEEHFKPCG------SIESVHVATFEDSGKCKGYAWVE 261
Query: 389 FKT 391
F++
Sbjct: 262 FES 264
>gi|324509900|gb|ADY44148.1| Cytoplasmic polyadenylation element-binding protein 1 [Ascaris
suum]
Length = 443
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 28/211 (13%)
Query: 195 VGEKRKKADNETEDMLVHRKEEG--FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+G + D + E VH G E R IF+G +P V + T+ F KFGE+
Sbjct: 122 MGMTNETGDRDAEGEKVHSSPFGCYMQPEEIYSRKIFIGGVPTDVTQDTVRATFSKFGEL 181
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNH 312
ID P G+ L++ + + +I++ E+S + ++ + G +
Sbjct: 182 ---------FIDWPKPSNGSTLKR--GGDCPLGYLFIIYMEERSVQKLMSSCYQMDGKAY 230
Query: 313 IRLDRACPPRKKLKGEDAPLYDIK------------KTVFVGNLPFDVKDEEIYQLFCGL 360
+ + +K ++ L DIK +TVF+G +P + EE+ + GL
Sbjct: 231 LLMSSQTVKQKPVEVRPWRLSDIKYEPYSDLQIDTLRTVFIGAMPRPTRAEELADVLSGL 290
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V + P +R KG A V F T
Sbjct: 291 F---GPVCYACIHVDPELRYPKGAARVTFAT 318
>gi|392573442|gb|EIW66582.1| hypothetical protein TREMEDRAFT_70147 [Tremella mesenterica DSM
1558]
Length = 591
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 40/166 (24%)
Query: 263 IDTKIPRKGAILQKQINENADSVHAYIVFKSE---------------QSTEAALAFNMAV 307
ID K RK A ++K ++ A + +AYIVF+ ++ AL + +
Sbjct: 279 IDAKGKRKVAFIKKDFHDQAATCNAYIVFEHPPPDRSKNLPPLMNPYEAANLALKADGSE 338
Query: 308 IGGNHIRLD--RACPPRKKLKGEDA------------PLYDIKKTVFVGNLPFDVKDEEI 353
+ G IR+D RA KG+DA D K+++FVG L + K+E++
Sbjct: 339 VMGRSIRVDVVRAS----GRKGDDADGTSKKRDGWLPSGTDPKRSLFVGGLDYAAKEEDV 394
Query: 354 YQLFCGLNDLESS-------VEAVRVIRHPHMRVGKGIAYVLFKTR 392
F L E V VR++R ++GKG YV F R
Sbjct: 395 RVFFEELVKKERGDSPDGRWVTGVRIVRDKETQLGKGFGYVHFTDR 440
>gi|256083494|ref|XP_002577978.1| splicing factor 3b subunit 4 (fragment) [Schistosoma mansoni]
gi|350645079|emb|CCD60205.1| splicing factor 3b, subunit 4 (fragment),putative [Schistosoma
mansoni]
Length = 344
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ +Q Q +
Sbjct: 14 TIYVGGLDEKVNESILWELFLQAG----------PVVNVHMPKDRINMQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G IR+++A +K L DI +F+GNL
Sbjct: 57 GFVEFMTEEDADYAMRIMNMIKLYGKPIRVNKASANQKNL--------DIGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGYAFINFAS 151
>gi|296412166|ref|XP_002835797.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629590|emb|CAZ79954.1| unnamed protein product [Tuber melanosporum]
Length = 418
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 30/159 (18%)
Query: 217 GFDDEGKLLRT--IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAIL 274
GF D KL T +++GNL VK++ L EF FG I SV+I I D + KG
Sbjct: 155 GFGDR-KLTPTKVVYIGNLQFDVKEEALRDEFKTFGPILSVKI----IYDARNMSKG--- 206
Query: 275 QKQINENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
Y+ F++ EQ+T A + AV+ G + + P G + P
Sbjct: 207 -----------FGYVEFETVEQATSAIENAHNAVLMGRRMNVQYVHRPTTGANGFNEP-- 253
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRV 372
KT+F+GNL FD+ D + +LF +D+ V+ VR+
Sbjct: 254 --SKTLFIGNLSFDMTDADFDRLF---SDIPGCVD-VRI 286
>gi|340381668|ref|XP_003389343.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Amphimedon queenslandica]
Length = 402
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 28/165 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFV NL + L K F + G++ VR+ I + G +V+
Sbjct: 170 TIFVSNLASDTDEDQLHKLFSQCGQVADVRL---------IKKFGGKF-------GTNVY 213
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+ F + + T AL + V+ I + +C ++ K Y+ K TVFV N+
Sbjct: 214 AYVEFTTSEPTVEALKLDHTVLNSRAIYVS-SCNADRQNK------YNNKATVFVTNVAH 266
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D+ + ++ +F ++ V+AVR++R+ R KG AY+ + T
Sbjct: 267 DLSERDLEDIFKEVD----QVKAVRLVRNKKGR-SKGFAYIEYDT 306
>gi|146166103|ref|XP_001015927.2| hypothetical protein TTHERM_00267920 [Tetrahymena thermophila]
gi|146145323|gb|EAR95682.2| hypothetical protein TTHERM_00267920 [Tetrahymena thermophila
SB210]
Length = 2074
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 31/165 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+ NLP + ++ + F I ++RI + K + K
Sbjct: 629 TVFIKNLPSNCTEASISQLFENRDHIKAIRI---------VKSKHGGMNKGF-------- 671
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AYI F S E++ A L N A++ G + + + PP+K+ ED+ T ++ NLP
Sbjct: 672 AYIDFSSMEEANNACLMMNDALVEGQKLYVAISAPPKKQTGQEDS-------TAYLSNLP 724
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
F + +EEI Q F + + VR+IR + +G AYV FK
Sbjct: 725 FKITEEEIRQAFP-----DHEINQVRMIRDGNGDF-RGFAYVEFK 763
>gi|52694662|ref|NP_705947.3| splicing factor 3B subunit 4 [Danio rerio]
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|94733748|emb|CAK11461.1| splicing factor 3b, subunit 4 [Danio rerio]
Length = 400
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 27/176 (15%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
DE + TIFVG L + + L EF G + S R+ I +K +
Sbjct: 155 DESEEPATIFVGRLSWSIDDEWLKTEFEPIGGVLSARV---------------IYEKGTD 199
Query: 280 ENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY----- 333
+ + Y+ FK++ E A+ I G I D + G+ A +
Sbjct: 200 RSRG--YGYVDFKNKTFAEKAIKEMQGKEIDGRPINCDMSTSKPASNGGDRAKKFGDTPS 257
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ +T+F+GNL FD + IY++F ++ S VR+ HP KG YV +
Sbjct: 258 EPSETLFLGNLSFDADRDNIYEVFSKYGEIIS----VRIPTHPETEQPKGFGYVQY 309
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 33/167 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V ++ L+ F + G++ +I I+E +
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKI--------------------IHEPGNDP 52
Query: 286 HAYIVFKSEQSTEAA-LAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK--TVFVG 342
+ ++ F QS +A LA N + G ++++ A P + P D K +FVG
Sbjct: 53 YCFVEFSDHQSAASALLAMNKRLCFGKEMKVNWATSPG------NTPKLDTSKHHHIFVG 106
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+L +++ ++ F D+ RV+R P KG +V F
Sbjct: 107 DLSPEIETTQLRDAFAPFGDISD----CRVVRDPQTLKSKGYGFVSF 149
>gi|301789695|ref|XP_002930273.1| PREDICTED: splicing factor 3B subunit 4-like, partial [Ailuropoda
melanoleuca]
Length = 252
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|327357349|gb|EGE86206.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis ATCC 18188]
Length = 419
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 27/176 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP KK + F G + + I T+I I Q +N A
Sbjct: 83 VWIGNLPFNAKKDDVRVFFTSSGSLKNEEI-------TRIHLPEGIKQNGKPQNKG--FA 133
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKG---EDAPLYDIKK 337
Y+ F ++++ EAA+A + +I G + R P+ + G ++ ++ K
Sbjct: 134 YVDFTTQKAMEAAIAMSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSK 193
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
VFVGNL FDV E + + F CG+ +E+++V KG A+V F++
Sbjct: 194 RVFVGNLGFDVTKEILEEHFKPCGV------IESIQVATFQDTGKCKGYAWVEFES 243
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA+++ + K+E D+ +FVGNL V ++ L EF FGE+ VRI
Sbjct: 234 QKRKAESDETPVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRI 293
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTE-----AALAFNMAVIGGNH 312
+ D R + D+ A FK+++ E L F A
Sbjct: 294 ----VTDRDSGRSRGFGYVEFTNAEDASKA---FKAKKDAEIDGRTINLDFANARQNAGG 346
Query: 313 IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRV 372
R DRA K + +P D T+F+GN+ F+ + + + F S+ +R+
Sbjct: 347 AR-DRAQSRAKSFGDQTSPESD---TLFIGNISFNADENAVQETFSS----HGSILGIRL 398
Query: 373 IRHPHMRVGKGIAYVLFKT 391
P KG YV F +
Sbjct: 399 PTDPESGRPKGFGYVQFSS 417
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA+++ + K+E D+ +FVGNL V ++ L EF FGE+ VRI
Sbjct: 236 QKRKAESDETPVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRI 295
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTE-----AALAFNMAVIGGNH 312
+ D R + D+ A FK+++ E L F A
Sbjct: 296 ----VTDRDSGRSRGFGYVEFTNAEDASKA---FKAKKDAEIDGRTINLDFANARQNAGG 348
Query: 313 IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRV 372
R DRA K + +P D T+F+GN+ F+ + + + F S+ +R+
Sbjct: 349 AR-DRAQSRAKSFGDQTSPESD---TLFIGNISFNADENAVQETFSS----HGSILGIRL 400
Query: 373 IRHPHMRVGKGIAYVLFKT 391
P KG YV F +
Sbjct: 401 PTDPESGRPKGFGYVQFSS 419
>gi|295665468|ref|XP_002793285.1| nucleic acid-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278199|gb|EEH33765.1| nucleic acid-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 273
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 29/136 (21%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI++GNL +V L ++ KFG I +VRI + D + +G
Sbjct: 84 TIYIGNLFFEVTADDLKRDMSKFGNILAVRI----VYDNRGMSRG--------------F 125
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPL----YDIKKTVFV 341
AY+ F S + EAA+A NM + G + ++ + +G P + +T+F+
Sbjct: 126 AYVQFDSVDAAEAAIAEMNMTIYEGRRVVVNYSS------RGSANPTPTRSNEPTRTLFI 179
Query: 342 GNLPFDVKDEEIYQLF 357
GNL F++ D E+ +LF
Sbjct: 180 GNLSFEMTDRELNELF 195
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 198 KRKKADNETEDMLVHRK-EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA++E E K EE +D G + +FVGNL + + L +EF +FGEI R
Sbjct: 239 KKRKAEDEPEASTKKSKTEETAEDNGS--KNLFVGNLSWNIDDEWLYREFEEFGEISGAR 296
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRL 315
+ I D R Y+ F KS + A A A+I G +
Sbjct: 297 V----ISDKATGRSKGF-------------GYVEFVKSSDAAAALAAKKGALIDGREANV 339
Query: 316 DRACP-----PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D + P PR++ A D K T+F+GNL FD + + + F +
Sbjct: 340 DFSTPRDTTAPRERANNRAAQFGDAKNPPSDTLFLGNLSFDADENVVGEAFG----EHGT 395
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
V VR+ KG YV F
Sbjct: 396 VVNVRLPTDQETGNPKGFGYVTF 418
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
gi|229299222|gb|EEN69841.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
Length = 365
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P K + Q A +
Sbjct: 14 TVYVGGLDEKVSEALLWELFLQAG----------PVVNTHMP-KDRVTQ------AHQGY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFMSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGYAFINFAS 151
>gi|169626491|ref|XP_001806645.1| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
gi|160706106|gb|EAT76075.2| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
Length = 321
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V + L K F +FGE+ SV+I + D + +G
Sbjct: 130 TLYIGNLYYEVTTEQLQKVFSRFGEVASVKI----VYDNRGMSRG--------------F 171
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNH--IRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
Y+ FKS + A+ +M V G + ++ RA + K E P KT+F+GN
Sbjct: 172 GYVEFKSIDDAQTAIDNLDMQVFEGRNLVVQYHRAKSDSDRPKREFPPANLPSKTLFIGN 231
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ F++ D+++ LF + + V VRV +G A+ F
Sbjct: 232 MSFEMSDKDLNDLFRDIRN----VNDVRVAIDRRTGQPRGFAHADF 273
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 198 KRKKADNETEDMLVHRK-EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA++E E K EE +D G + +FVGNL + + L +EF +FGEI R
Sbjct: 213 KKRKAEDEPEASTKKSKTEETAEDNGS--KNLFVGNLSWNIDDEWLYREFEEFGEISGAR 270
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRL 315
+ I D R Y+ F KS + A A A+I G +
Sbjct: 271 V----ISDKATGRSKGF-------------GYVEFVKSSDAAAALAAKKGALIDGREANV 313
Query: 316 DRACP-----PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D + P PR++ A D K T+F+GNL FD + + + F +
Sbjct: 314 DFSTPRDTTAPRERANNRAAQFGDAKNPPSDTLFLGNLSFDADENVVGEAFG----EHGT 369
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
V VR+ KG YV F
Sbjct: 370 VVNVRLPTDQETGNPKGFGYVTF 392
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 32/174 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++V +P K + ++ F G + VR+ D+ PR +
Sbjct: 63 TVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQ--DSGKPRG---------------Y 105
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-----KLKGEDAPLYDIK--KTV 339
A++VF E + E AL + + ++ + RA PR K K ++A +K +TV
Sbjct: 106 AHVVFDDEAALEKALELDGQYLFNRYLSIRRAEAPRAVEMALKEKTQNATKKAVKGCRTV 165
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ LP++V+++ I Q CG ++ +VR+ H + KG YV F +
Sbjct: 166 YIKQLPYEVEEDTIRQALASCG------TITSVRLPIWNHTKKLKGFGYVEFSS 213
>gi|301097256|ref|XP_002897723.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
gi|262106744|gb|EEY64796.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
Length = 188
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ L + ++ G + +V + PR A +
Sbjct: 13 TVYVGNLDDRVTEELLWELMLQSGSVCNVHM----------PRDKV-------TGAHQNY 55
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E E A+ NM + G IR+ +A RK L D+ +F+GNL
Sbjct: 56 GFVEFRTEDCAEYAVKVLNMIQLYGRVIRVKKASNDRKNL--------DVGANLFIGNLD 107
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + VE +++R P + KG +V F +
Sbjct: 108 PEVDEKLLYDTFSAFGGI---VETPKIMRDPDTKASKGFGFVSFDS 150
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTETLLWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKSL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 LEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F GNL V ++ L EF +FGE+ RI + D + R + D+V A
Sbjct: 235 LFAGNLSWNVDEEWLRSEFEEFGELVGARI----VTDRESGRSRGFGYVEFANVEDAVKA 290
Query: 288 YIVFKSEQSTEAALAFNMAVI----GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ K + L + A GGN +RA K + +P D T+F+GN
Sbjct: 291 HAAKKDAELDGRKLNLDFANARTNAGGNP--RERADSRAKSFGDQTSPESD---TLFLGN 345
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
LPF + + +LF S+ +R+ P KG YV F +
Sbjct: 346 LPFSADENAVQELFS----KHGSILGIRLPTDPDSGRPKGFGYVQFSS 389
>gi|406696396|gb|EKC99686.1| RNA-binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 621
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 33/173 (19%)
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA------------ 300
D V +S +D K RK A ++K +E+A + +AY+VF+ + A
Sbjct: 302 DDVVDKSKSFLDAKGKRKVAFIKKDFHESAAACNAYLVFEHARPDRPANLPPLMNPFDAA 361
Query: 301 ---LAFNMAVIGGNHIRLDRACPPRKKLKG--------EDAPL---YDIKKTVFVGNLPF 346
LA N GN +R+D P DA L D K VFVG L +
Sbjct: 362 AAALAANGTEFMGNTLRVDTMRSPAAAALSSASTSLSKRDAWLPSGTDPKSCVFVGGLDY 421
Query: 347 DVKDEEIYQLFCGLNDLE-------SSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
K+E++ F L E + V +VR+IR ++GKG YV F R
Sbjct: 422 AAKEEDVRAFFEALVVSERGAPSEGTYVTSVRLIRDRDTQLGKGFGYVHFVDR 474
>gi|427791903|gb|JAA61403.1| Putative rna-binding protein sart3 rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 598
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D K +RT+F+ NL V++ + + F + GEI+ +R+ + D K KG
Sbjct: 428 DPLKEIRTVFLSNLAYDVEESQIEEAFKEVGEIEELRL----VRDYKGRSKG-------- 475
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
Y+VF QS EAAL + + G + + + C R + + K +
Sbjct: 476 ------FGYLVFTHMQSVEAALKRDRTPVNGRPVFVSK-CNERNQFRFRTGM---EKNKL 525
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI--RHPHMRVGKGIAYV 387
FV +PF V ++E+ +LF +L + VR++ R+ H KGIAYV
Sbjct: 526 FVKGIPFSVTEKELEELFGKYGEL----KGVRLVTYRNGH---SKGIAYV 568
>gi|449281849|gb|EMC88820.1| Splicing factor 3B subunit 4, partial [Columba livia]
Length = 177
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 3 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 45
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 46 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 97
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 98 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 140
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T +VGNL +V ++ L + F++ G P+++ +P+ N +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAG----------PVVNVYVPKDRVT-------NLHQGY 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F+SE+ + A+ NM + G IR+++A +K L D+ +FVGNL
Sbjct: 69 GFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL--------DVGANLFVGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ +Y F + V +++R P +G +V + +
Sbjct: 121 PDVDEKLLYDTFSAFGVI---VTNPKIMRDPDTGNSRGFGFVSYDS 163
>gi|401888380|gb|EJT52338.1| RNA-binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 621
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 33/173 (19%)
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA------------ 300
D V +S +D K RK A ++K +E+A + +AY+VF+ + A
Sbjct: 302 DDVVDKSKSFLDAKGKRKVAFIKKDFHESAAACNAYLVFEHARPDRPANLPPLMNPYDAA 361
Query: 301 ---LAFNMAVIGGNHIRLDRACPPRKKLKG--------EDAPL---YDIKKTVFVGNLPF 346
LA N GN +R+D P DA L D K VFVG L +
Sbjct: 362 AAALAANGTEFMGNTLRVDTMRSPAAAALSSASTSLSKRDAWLPSGTDPKSCVFVGGLDY 421
Query: 347 DVKDEEIYQLFCGLNDLE-------SSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
K+E++ F L E + V +VR+IR ++GKG YV F R
Sbjct: 422 AAKEEDVRAFFEALVVSERGAPSEGTYVTSVRLIRDRDTQLGKGFGYVHFVDR 474
>gi|432882405|ref|XP_004074014.1| PREDICTED: splicing factor 3B subunit 4-like [Oryzias latipes]
Length = 344
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|388857361|emb|CCF49035.1| uncharacterized protein [Ustilago hordei]
Length = 547
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
R DR+ PPR++L D P + T FVGNL FDV + ++ + F + + + +VR++
Sbjct: 65 RSDRSYPPREELPLPDKPPF----TAFVGNLSFDVMEADVQEFF-----VPAKIVSVRIV 115
Query: 374 RHPHMRVGKGIAYVLFKTR 392
P + KG YV F+T+
Sbjct: 116 TGPDGKP-KGFGYVEFQTQ 133
>gi|449516393|ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, partial [Cucumis sativus]
Length = 678
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV-RVIRHPHMRVGKGIAYVLFKT 391
D+K+TV++GNLPFD+ +EE+ Q F G ++ S V + +V + P KG ++ FKT
Sbjct: 224 DLKRTVYIGNLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRP-----KGTGFLKFKT 277
>gi|50555934|ref|XP_505375.1| YALI0F13475p [Yarrowia lipolytica]
gi|49651245|emb|CAG78182.1| YALI0F13475p [Yarrowia lipolytica CLIB122]
Length = 422
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+T+FVG L V L KEF G + S R+ I +K +
Sbjct: 167 FKTVFVGGLSWNVDDDWLTKEFADAGAV-SARV---------------ITEKATGRSKG- 209
Query: 285 VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD-----RACPPRKKLKGEDA---PLYDI 335
Y+ F S + + F I G +RLD R P +K+ L +
Sbjct: 210 -FGYVDFASGADAQKCVEEFQDKEIDGRTVRLDISTNVRQTPEQKQRDRSSQYGDQLSEP 268
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
T+FVGNL FD ++++ +F SV ++R+ HP KG YV F
Sbjct: 269 ADTLFVGNLSFDTNRDDLFGIFGEYG----SVVSIRLPTHPETEQPKGFGYVQF 318
>gi|19114443|ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-]
gi|6226864|sp|P41891.2|GAR2_SCHPO RecName: Full=Protein gar2
gi|7523472|emb|CAB86413.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 32/173 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSV 285
T+FVG L V + L +EF ++G I R+ I+D + R KG
Sbjct: 264 TVFVGRLSWNVDDQWLGQEFEEYGTIVGARV----IMDGQSGRSKG-------------- 305
Query: 286 HAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACP--------PRKKLKGEDAPLYDIK 336
+ Y+ F++ ++ +AA+A N I G + LD + P +++ L +
Sbjct: 306 YGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPS 365
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
TVFVGNL F+ ++++ F G D++S +R+ P KG YV F
Sbjct: 366 DTVFVGNLSFNATEDDLSTAFGGCGDIQS----IRLPTDPQSGRLKGFGYVTF 414
>gi|154292195|ref|XP_001546674.1| hypothetical protein BC1G_14719 [Botryotinia fuckeliana B05.10]
Length = 478
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH- 286
++VGNLP V K+ L K F++F +++ I I P G K + VH
Sbjct: 177 VWVGNLPWSVSKEELRKWFVEFSDLEEEHITR---IHMPGPNDGKPANKVEKKFGKPVHN 233
Query: 287 ---AYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKLKGEDAPLYDIKKT 338
AY+ F +E+ + A+ + ++ G + + P +K+ E P K
Sbjct: 234 KGFAYVDFATEEQVKLAVELSEQLLTGRRLLIKDNKSFEGRPEKKEAVIEGKPP---SKK 290
Query: 339 VFVGNLPFDVKDEEIYQLF--CG 359
+FVGNL FD +E I + F CG
Sbjct: 291 IFVGNLRFDATEEVIKEHFEKCG 313
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V ++ L EF +FGE+ RI + D + R + D+V A
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELAGTRI----VTDRESGRSRGFGYVEFVNVEDAVKA 295
Query: 288 YIVFKSEQ--STEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ K + + L + A GN +RA K + +P D T+F+GN+
Sbjct: 296 HTAKKDAELDGRKMNLDYANARTNGNANPRERADNRAKSFGDQTSPESD---TLFIGNIS 352
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
F + + +LF +++ +R+ P KG YV F +
Sbjct: 353 FSADENMVQELFSKYG----AIQGIRLPTDPESGRPKGFGYVQFSS 394
>gi|409042311|gb|EKM51795.1| hypothetical protein PHACADRAFT_262138 [Phanerochaete carnosa
HHB-10118-sp]
Length = 407
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 43/163 (26%)
Query: 272 AILQKQINENADSVHAYIVFKS---------------------EQSTEAALAFNMAVIGG 310
A ++++I+ DSV+AYIVF E + A A + +V
Sbjct: 88 AFIKQEIHSGVDSVNAYIVFAHPVPAESRPKNLPPLKPIMDPYEAAKAAIRAADGSVFMD 147
Query: 311 NHIRLDRACPPRKKLK---GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGL------- 360
+RLD A + K + ++P D K T+FVGNL F K+E++ F GL
Sbjct: 148 RTLRLDLAAKGKGKAREIVNAESP-DDPKATIFVGNLDFAAKEEDVRVFFEGLVVTERGE 206
Query: 361 -----------NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+D ++ V+ VR+IR +GKG YV F R
Sbjct: 207 PTEIQAEDAERSDEKAWVKRVRLIRDKDTLLGKGFGYVQFMDR 249
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V ++ L F + G + S +I I E ++
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKI--------------------IREASNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + S S + AL A N I+++ A P + K + + Y I FVG+L
Sbjct: 48 YAFIEYASHTSAQTALAAMNKRFFLKKEIKVNWATSPGNQPKTDTSQHYHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R P +G A+V F
Sbjct: 104 SPEIETETLREAFAPFGEISN----CRIVRDPQTLKSRGYAFVSF 144
>gi|449461647|ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
Length = 966
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV-RVIRHPHMRVGKGIAYVLFKT 391
D+K+TV++GNLPFD+ +EE+ Q F G ++ S V + +V + P KG ++ FKT
Sbjct: 512 DLKRTVYIGNLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRP-----KGTGFLKFKT 565
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + L +EF G + S R+ I+++ ++ +
Sbjct: 197 TLFVGRLSWNIDDSWLKREFEHIGGVISARV---------------IMERATGKSRG--Y 239
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRAC--PPRKKLKGEDAPLYD-----IKKT 338
Y+ F+++ + E AL I G I LD + P + + A Y + T
Sbjct: 240 GYVDFETKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASRSTNDRAKQYGDSQSALSDT 299
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+FVGNL F+ + ++ +F + V + RV HP + KG YV F +
Sbjct: 300 LFVGNLSFNANRDNLFTVFGEYGN----VISCRVPTHPDTQQPKGFGYVQFSS 348
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 18/103 (17%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
D + L T+FVGNL + L F ++G + S R+ + P DT+ P+
Sbjct: 291 DSQSALSDTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHP--DTQQPKG-------- 340
Query: 279 NENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S +AAL A N I G RLD + P
Sbjct: 341 -------FGYVQFSSVDEAKAALEALNGEYIEGRPCRLDFSTP 376
>gi|195399065|ref|XP_002058141.1| GJ15655 [Drosophila virilis]
gi|194150565|gb|EDW66249.1| GJ15655 [Drosophila virilis]
Length = 340
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKGFAFINFAS 151
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|325186713|emb|CCA21261.1| RNA polymerase Ispecific transcription initiation factor rrn3
putative [Albugo laibachii Nc14]
Length = 988
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI++GNL KV ++ L + ++ G + ++ +PR Q +
Sbjct: 718 TIYIGNLDDKVSEELLWELMLQAGSV----------VNVHMPRDKVTTNHQ-------NY 760
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E+ E A+ NM + G IR+ +A +K L DI +F+GNL
Sbjct: 761 GFVEFRTEECAEYAIKIMNMIQVYGKPIRVKKASQDKKTL--------DIGANLFIGNLD 812
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+V ++ +Y F + +E +++R P + +G ++ F
Sbjct: 813 PEVDEKLLYDTFSAFGGI---IETPKIMRDPDTKHSRGFGFISF 853
>gi|443717173|gb|ELU08367.1| hypothetical protein CAPTEDRAFT_163289 [Capitella teleta]
Length = 412
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ +I++ A +
Sbjct: 14 TIYVGGLDDKVSESILWELFLQAG----------PVVNVHMPKD------RISQ-AHQGY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIRIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINFAS 151
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ + Q +
Sbjct: 14 TIYVGGLDDKVTESLLWELFVQSG----------PLVNVHMPKDRVTMMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINFAS 151
>gi|348513245|ref|XP_003444153.1| PREDICTED: splicing factor 3B subunit 4-like [Oreochromis
niloticus]
Length = 401
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 8 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 50
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 51 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 102
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 103 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 145
>gi|45360881|ref|NP_989116.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|38512254|gb|AAH61357.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|89268695|emb|CAJ83013.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
Length = 388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 34/175 (19%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++ +FVG L + ++L + F GEI S R+ + ++ ++
Sbjct: 287 IKNVFVGGLSWGITNESLQEAFESCGEIVSARV---------------VTDRETGKSRG- 330
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP----------PRKKLKGEDAPLYD 334
Y+ F +AAL + G I +D + P P+K+ E L
Sbjct: 331 -FGYVDFVDAAGAKAALEMAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDE---LSA 386
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+TVFVGNL F+ + +++ F V +VRV KG AYV F
Sbjct: 387 PSQTVFVGNLSFESTQDAVWESFSDFG----GVNSVRVPTDMETGRPKGFAYVEF 437
>gi|403371683|gb|EJY85724.1| RNA binding motif protein 34 [Oxytricha trifallax]
Length = 337
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 42/180 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +++ N P V++K + K F + GEI+ + +R +P D++ +KQ
Sbjct: 28 RIVYLENFPSNVEEKNIKKAFRENGEIEKIWLRVMPEKDSQ--------KKQ-------- 71
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLD------RACPPRKKL-----KGEDAPLYD 334
AY++FK+++ A N+A + H ++D ++ RK L K +D L D
Sbjct: 72 -AYLLFKNKED-----ALNVATLIMKH-KIDGSDLEAKSNKVRKNLATEGDKSQDISLND 124
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+ T+F+ N+ + ++E+ F CG V ++ +++ ++ +GIAYV F ++
Sbjct: 125 YETTIFIRNVHPRLSEDELKTHFQECG------HVVSINLVKDKTNQLNQGIAYVRFASK 178
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK +ET+D +K+ D+E T+FVG L + + L +EF G + R+
Sbjct: 269 KRKSDASETQDSKRTKKQ---DEEPA---TLFVGRLSWNIDDEWLQREFEPLGGVTGARV 322
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
I +K ++ + Y+ F+++ + AL + I G I LD
Sbjct: 323 ---------------IYEKASGKSRG--YGYVDFETKSQAQHALKEYQGREIDGRPINLD 365
Query: 317 ------RACPPR--KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVE 368
R PR + + D P T+F+GNL F+ + + +Y +F V
Sbjct: 366 MSESKPRPSNPRFDRAKQFGDVPSAP-SSTLFIGNLSFNAQRDNLYDIFGEYG----RVV 420
Query: 369 AVRVIRHPHMRVGKGIAYVLFKT 391
+ R+ HP + KG Y+ F T
Sbjct: 421 SCRMPTHPDTQQPKGFGYIEFST 443
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 12 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 55 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 107 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 149
>gi|407929152|gb|EKG21988.1| MFS pantothenate transporter [Macrophomina phaseolina MS6]
Length = 345
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 37/178 (20%)
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
EGK RT++VGNL + ++ L +EF +FG I + T I R A L +
Sbjct: 159 EGK--RTLYVGNLFYQTQEDQLRQEFSRFGNI----------VKTTIIRDPAGLSRGF-- 204
Query: 281 NADSVHAYIVFKSEQSTEAALA-FNMAVIGG------NHIRLDRACP-PRKKLKGEDAPL 332
Y+ F+++ S A+ N VI G +H R ++ PR++ +G P
Sbjct: 205 ------GYVEFENDDSAAVAIVQMNQRVIDGRRLTVQHHRRREQTEERPRRRNEGRVNP- 257
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGL-NDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
KT+F+GN+ F++ D ++ LF + N L+ V R P +G A+ F
Sbjct: 258 --PSKTLFIGNMSFEMSDRDLNDLFRNIRNVLDVRVAIDRRTGQP-----RGFAHADF 308
>gi|449489905|ref|XP_002191033.2| PREDICTED: splicing factor 3B subunit 4 [Taeniopygia guttata]
Length = 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGHVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSTYQAATTALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|358379816|gb|EHK17495.1| hypothetical protein TRIVIDRAFT_43079, partial [Trichoderma virens
Gv29-8]
Length = 245
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 36/178 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F G+L V L + F F + R+ + KG +
Sbjct: 1 TLFAGSLAWSVDDNALYQAFESFDGLVGARV---------VTEKGTGRSRGF-------- 43
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRA------------CPPRKKLKGEDAPLY 333
Y+ FK +S + A A +GG +I LD A R K G+ L
Sbjct: 44 GYVDFKDAESAQVAYEAMQGQDVGGRNINLDYANARPEGSNPQDRAADRAKKHGD--TLS 101
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+FVGNLPFD + + + F N++ ++V +VR+ P KG YV F +
Sbjct: 102 AESDTLFVGNLPFDTDQDTVTEFF---NEV-AAVTSVRLPTDPDSGNLKGFGYVTFGS 155
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 71/176 (40%), Gaps = 40/176 (22%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG+L V L +EF GE+ S R+ I D + R
Sbjct: 254 TLFVGSLSWNVDDDMLKEEFKFCGEVVSARV----ITDRETGRSKGF------------- 296
Query: 287 AYIVFKSEQSTEAALAFNM-AVIGGNHIRLD---------RACPPRKKLKGEDAPLYDIK 336
Y+ F S E A A A I G I++D + KK +P D
Sbjct: 297 GYVDFASPADAEKAHAEKQGAFIDGRQIKVDFSTGKSNNNDSADRAKKFGDVTSPESD-- 354
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLF 389
T+FVGNLPFD DE++ F G SV ++ +R P + KG YV F
Sbjct: 355 -TLFVGNLPFDA-DEDVVSEFFG------SVAEIKSLRLPTDQESGRRKGFGYVSF 402
>gi|393238200|gb|EJD45738.1| hypothetical protein AURDEDRAFT_137120 [Auricularia delicata
TFB-10046 SS5]
Length = 587
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 34/152 (22%)
Query: 269 RKGAILQKQINENADSVHAYIVFK-----SEQSTEAA-LAFNMAVIGGN-------HIRL 315
+K A + K+ + +AD+ +AY VF SE T A A + V G+ IR+
Sbjct: 275 KKIAFIHKEFHSDADTTNAYAVFAYPKPDSEGVTLAPDEAARLCVEKGDGSTFMERTIRV 334
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS--------- 366
DR G + D ++++FVGNL F K+E++ F L E
Sbjct: 335 DRVG------AGVASAKTDARRSIFVGNLDFAAKEEDLRVFFESLLTTERGAPSAPEGQE 388
Query: 367 ------VEAVRVIRHPHMRVGKGIAYVLFKTR 392
V VR++R ++GKG AYV F R
Sbjct: 389 AEQTRWVTHVRLVRDAATQLGKGFAYVEFADR 420
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 205 ETEDMLVHRKEEGFDDEGKLLRT-IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
E E +K + D+E +FVGNL V ++ L +EF FGE+ VRI +
Sbjct: 280 EEEPAAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRI----VT 335
Query: 264 DTKIPR-KGAILQKQINENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPP 321
D R +G + +N + +E + L + N+ DRA
Sbjct: 336 DRDSGRSRGFGYVEYVNAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQAR 395
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG 381
+ + +P D T+FVGN+PF ++ + +LF ++ +R+ P
Sbjct: 396 ARNFGDQTSPESD---TLFVGNIPFSANEDSVSELFG----QSGTIVGIRLPTDPESGRP 448
Query: 382 KGIAYVLFKT 391
KG YV F +
Sbjct: 449 KGFGYVQFSS 458
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 14/207 (6%)
Query: 185 AKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIK 244
AK E +K +++KA++E E++ +K + +EG L F+GNL V ++ L
Sbjct: 191 AKNTEAEKPSSKSQKRKAEDEEEEVTAPKKTKVDSNEGGNL---FIGNLSWNVDEEWLRS 247
Query: 245 EFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFN 304
EF +FGE+ VRI + D R + AD+ A+ K + L +
Sbjct: 248 EFEEFGELAGVRI----VTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVD 303
Query: 305 MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
A N +RA + + +P D T+F+GN+ F + I + F
Sbjct: 304 FANGRSNAAPKERAQSRAQNFGDQTSPESD---TLFIGNIAFSANENMISEAFA----EH 356
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLFKT 391
S+ VR+ P KG YV F +
Sbjct: 357 GSILGVRLPTDPESGRPKGFGYVQFSS 383
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4 [Felis
catus]
Length = 424
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 30/143 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L V L K F FGEI VR+ K P K N
Sbjct: 89 IFVGDLAENVDNALLRKTFEPFGEISEVRV-------VKDPAK----------NKSKGFG 131
Query: 288 YIVF-KSEQSTEAALAFNMAVIGGNHIRLDRAC----PPRKKLKGEDAPLYD-------- 334
++ F + E + +A + IGG ++ + A P + K L+D
Sbjct: 132 FVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQ 191
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF 357
+ TV+VGNLP DVKD E+ Q+F
Sbjct: 192 LNTTVYVGNLPPDVKDYELQQMF 214
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 205 ETEDMLVHRKEEGFDDEGKLLRT-IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
E E +K + D+E +FVGNL V ++ L +EF FGE+ VRI +
Sbjct: 280 EEEPAAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRI----VT 335
Query: 264 DTKIPR-KGAILQKQINENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPP 321
D R +G + +N + +E + L + N+ DRA
Sbjct: 336 DRDSGRSRGFGYVEYVNAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQAR 395
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG 381
+ + +P D T+FVGN+PF ++ + +LF ++ +R+ P
Sbjct: 396 ARNFGDQTSPESD---TLFVGNIPFSANEDSVSELFG----QSGTIVGIRLPTDPESGRP 448
Query: 382 KGIAYVLFKT 391
KG YV F +
Sbjct: 449 KGFGYVQFSS 458
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSV 285
T+FVG L V + L +EF ++G I R+ I+D + R KG
Sbjct: 264 TVFVGRLSWNVDDQWLGQEFEEYGTIVGARV----IMDGQSGRSKG-------------- 305
Query: 286 HAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACP--------PRKKLKGEDAPLYDIK 336
+ Y+ F++ ++ +AA+A N I G + LD P +++ L +
Sbjct: 306 YGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLPNPRPANPQPYAQQRAGNFGDQLSEPS 365
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
TVFVGNL F+ ++++ F G D++S +R+ P KG YV F
Sbjct: 366 DTVFVGNLSFNATEDDLSTAFGGCGDIQS----IRLPTDPQSGRLKGFGYVTF 414
>gi|195133204|ref|XP_002011029.1| GI16317 [Drosophila mojavensis]
gi|193907004|gb|EDW05871.1| GI16317 [Drosophila mojavensis]
Length = 340
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKGFAFINFAS 151
>gi|52547949|gb|AAM28203.2| splicing factor 3b subunit 4 [Danio rerio]
Length = 400
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 AVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 70/178 (39%), Gaps = 42/178 (23%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL V L +EF G + S R+ I D + R
Sbjct: 240 TLFVGNLSWNVDDAMLAEEFKFCGTVTSARV----ITDRESGRSKGF------------- 282
Query: 287 AYIVFKSEQSTEAALAFNM-AVIGGNHIRLD----------RACPPRKKLKGED-APLYD 334
Y+ F + + E A A I G I++D A R K G+ +P D
Sbjct: 283 GYVDFATPEEAEKAHGEKQGAFIDGREIKVDFSTGKATNSNDAAGARAKKYGDTVSPESD 342
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLF 389
T+FVGNLPFD ++ + F S V V+ +R P + KG YV F
Sbjct: 343 ---TLFVGNLPFDADEDSVGAFF-------SEVAEVKSLRLPTEQESGRRKGFGYVTF 390
>gi|195060144|ref|XP_001995761.1| GH17589 [Drosophila grimshawi]
gi|193896547|gb|EDV95413.1| GH17589 [Drosophila grimshawi]
Length = 340
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKGFAFINFAS 151
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 39/175 (22%)
Query: 195 VGEKRKKADNETEDMLVHRKEEG----FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFG 250
V +KRK +D + H++E G + K L IF+ LP + + + F G
Sbjct: 215 VSKKRKNSDAGEKSNKAHKQENGDAAAVANPQKTLE-IFIAGLPWSATEDEVKEHFAGCG 273
Query: 251 EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGG 310
E+ RI P+ + + S A++ F + ++ EAALA + GG
Sbjct: 274 EVTGARI---PLQNGR----------------SSGTAFVTFATSEAAEAALAMDGQDFGG 314
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIK----KTVFVGNLPFDVKDEEIYQLF--CG 359
+++ A E ++D K +VF+GNL +DV + + + F CG
Sbjct: 315 RWMKIRTA---------EKKNMFDEKPEGCTSVFIGNLSWDVDENTVRETFGECG 360
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + L F + G + S +I I E +
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKI--------------------IREASSDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + S QS + AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 48 YAFIEYASHQSAQTALAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R P KG A+V F
Sbjct: 104 SPEIETETLREAFAPFGEISN----CRIVRDPQTLKSKGYAFVSF 144
>gi|397618570|gb|EJK64953.1| hypothetical protein THAOC_14256 [Thalassiosira oceanica]
Length = 210
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 19/115 (16%)
Query: 284 SVH-AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
S+H A S S + AL N GG +R+D A +P D ++VFVG
Sbjct: 4 SLHRAMWCLLSLDSVKEALEMNNTEHGGFTLRVDHA-----------SPTNDASRSVFVG 52
Query: 343 NLPFDVKDEEI---YQLFCGLNDLE----SSVEAVRVIRHPHMRVGKGIAYVLFK 390
NLP+ ++E + ++ + D+ S+V +VR+IR + KGI Y++ +
Sbjct: 53 NLPYAAEEETLRSHFETYLSRFDVNERDGSAVSSVRIIRDKDTQQCKGIGYIMLR 107
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++T+++G+L + + L F GE+ SV++ I KQ N++
Sbjct: 73 VKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKV---------------IRNKQTNQSEG- 116
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVI--GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
+ ++ F S E L FN ++ GG + RL+ A + + +D+P Y T+FV
Sbjct: 117 -YGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDY----TIFV 171
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
G+L DV D + ++F +SV+ +V+ KG +V F
Sbjct: 172 GDLAADVSDHHLTEVF---RTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
>gi|396493610|ref|XP_003844097.1| hypothetical protein LEMA_P017480.1 [Leptosphaeria maculans JN3]
gi|312220677|emb|CBY00618.1| hypothetical protein LEMA_P017480.1 [Leptosphaeria maculans JN3]
Length = 439
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 70/183 (38%), Gaps = 35/183 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K +L + E+ S +I V + P + K +N A
Sbjct: 115 VWIGNLPWSATKDSLRTFLVDNAEMKSEQITRVHLPAPTKPPNPSWTTKPLNRG----FA 170
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKK----------LKGEDAPL 332
Y+ F SE + +A+A + G + + A P + K KG
Sbjct: 171 YVDFSSELAMYSAIALTETKMDGRALLIKNAKSFEGRPDKPKNEDTQDTGRGAKGAVKGA 230
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV------GKGIAY 386
+ K VFVGNL FDV E DLE+ + H HM KG A+
Sbjct: 231 HPPNKRVFVGNLSFDVTKE----------DLEAHYSQCGTVEHIHMATFEDSGKCKGYAW 280
Query: 387 VLF 389
V F
Sbjct: 281 VTF 283
>gi|189188072|ref|XP_001930375.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187971981|gb|EDU39480.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 447
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 70/182 (38%), Gaps = 34/182 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K++L + EI S +I V + P K +N+ A
Sbjct: 127 VWIGNLPWSATKESLRNFLCENSEIKSEQITRVHLPPPTKPANPNWTNKPLNKG----FA 182
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKLKGEDA---------PLY 333
Y+ F +E + +A + G + + A P + K + ED P +
Sbjct: 183 YVDFSTELAMYTCIALTETKMDGRALLIKNAKSFEGRPDKPKTEQEDGGRGAKGAGKPGH 242
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV------GKGIAYV 387
K VFVGNL FDV E DLE + H HM KG A+V
Sbjct: 243 PPNKRVFVGNLSFDVTKE----------DLEYHYGQAGEVEHIHMATFEDSGKCKGYAWV 292
Query: 388 LF 389
F
Sbjct: 293 TF 294
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 188 EEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFI 247
EE K G KRK A+ E+ + +G D+E +FVG L V L EF
Sbjct: 161 EEAKPQANGNKRK-AEEESIAPAKKARADGGDEEATT--NVFVGQLSWNVDNDWLKSEFE 217
Query: 248 KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV 307
GE+ S R+ V D++ R Y+ F +S+ A+ + +
Sbjct: 218 SCGEVVSARV--VFDRDSQKSRG---------------FGYVEFADLESSAKAIEKDGSE 260
Query: 308 IGGNHIRLDRACPPRKKLKGED-APLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLN 361
I G IR++ A + E A +++ K+ T+++G+L F V ++++Y+ F
Sbjct: 261 IDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHG 320
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D++S VR+ KG YV F +
Sbjct: 321 DVQS----VRLPTDRDTGAPKGFGYVQFSS 346
>gi|148229719|ref|NP_001086794.1| MGC82420 protein [Xenopus laevis]
gi|50604232|gb|AAH77458.1| MGC82420 protein [Xenopus laevis]
Length = 383
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ + +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINYAS 151
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158282605|gb|EDP08357.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 396
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL ++ ++ + + F + G P+++ +P K NA +
Sbjct: 32 TVYVGNLDVQTTEELVWELFTQAG----------PVVNVYMP-------KDRVTNAHQGY 74
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FK E+ + A+ NM + G IR+++A +++ D+ +F+GNL
Sbjct: 75 GFVEFKGEEDADYAIKVLNMVKVYGKAIRVNKASQDKRQA--------DVGANLFIGNLD 126
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
DV ++ +Y F + V +++R P +G +V +
Sbjct: 127 PDVDEKLLYDTFSAFGVI---VNTPKIMRDPDTGNSRGFGFVSY 167
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDTSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|126273923|ref|XP_001387749.1| nuclear localization sequence binding protein [Scheffersomyces
stipitis CBS 6054]
gi|126213619|gb|EAZ63726.1| nuclear localization sequence binding protein, partial
[Scheffersomyces stipitis CBS 6054]
Length = 245
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 37/177 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + + L +EF G + S R+ I+++ ++ +
Sbjct: 4 TLFVGRLSWNIDDEWLRREFEPLGGVISARV---------------IMERATGKSRG--Y 46
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD---------RACPPRKKLKGE--DAPLYD 334
Y+ F S+ + E AL + + G I LD ++ R K G+ AP
Sbjct: 47 GYVDFDSKSAAEKALNEYQGRELDGRPINLDMSTGKPHVTKSTENRAKQYGDTPSAP--- 103
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+F+GNL F+ + ++ +F + +V + R+ HP + KG YV F +
Sbjct: 104 -SDTLFIGNLSFNADRDNLFNIF----GVHGTVISCRIPTHPDTQQPKGFGYVQFSS 155
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 19/132 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNLP V L F + G ++ V + I D R
Sbjct: 85 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEV----IYDKLTGRSRGF-------------G 127
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
++ S Q EAA+ FN V+ G +R++ PP + + P D + V+VGNL +
Sbjct: 128 FVTMSSVQEVEAAVEQFNGYVLDGRSLRVNSGPPPPRDPSSQRGPRGDANR-VYVGNLSW 186
Query: 347 DVKDEEIYQLFC 358
V + + LF
Sbjct: 187 GVDNSALANLFS 198
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKLMRDPETGKSKGFAFINFAS 151
>gi|355558380|gb|EHH15160.1| hypothetical protein EGK_01215 [Macaca mulatta]
Length = 424
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis carolinensis]
Length = 417
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|330922100|ref|XP_003299696.1| hypothetical protein PTT_10747 [Pyrenophora teres f. teres 0-1]
gi|311326521|gb|EFQ92208.1| hypothetical protein PTT_10747 [Pyrenophora teres f. teres 0-1]
Length = 447
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 69/182 (37%), Gaps = 34/182 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K +L + EI S +I V + P K +N+ A
Sbjct: 127 VWIGNLPWSATKDSLRTFLCENSEIKSEQITRVHLPPPTKPANPNWTNKPLNKG----FA 182
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKLKGEDA---------PLY 333
Y+ F +E + +A + G + + A P + K + ED P +
Sbjct: 183 YVDFSTELAMYTCIALTETKMDGRALLIKNAKSFEGRPDKPKTEQEDGGRGVKGAGKPGH 242
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV------GKGIAYV 387
K VFVGNL FDV E DLE + H HM KG A+V
Sbjct: 243 PPNKRVFVGNLSFDVTKE----------DLEYHYGQAGEVEHIHMATFEDSGKCKGYAWV 292
Query: 388 LF 389
F
Sbjct: 293 TF 294
>gi|296804682|ref|XP_002843192.1| nucleolar protein 13 [Arthroderma otae CBS 113480]
gi|238845794|gb|EEQ35456.1| nucleolar protein 13 [Arthroderma otae CBS 113480]
Length = 381
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP ++ L + F+ K G +DS I IP +G QK + N
Sbjct: 86 VWIGNLPFTATREAL-RTFLTTKSGILDS------EITRIHIP-EGESKQKGVKRNKG-- 135
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC----PPRKKLKGED---APLYDIKKT 338
AY+ F S++ + ALA + ++GG + + A P K ED A
Sbjct: 136 FAYVDFASQKVVDLALALSEELVGGRRVLIKDATNFEGRPEKNADQEDGSKAAGNPPSTK 195
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+FVGNL FD E++ F CG +V V V KG A+V F++
Sbjct: 196 IFVGNLSFDTTKEDLEAHFGPCG------TVSHVHVATFEDSGKCKGYAWVEFES 244
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 188 EEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFI 247
EE K G KRK A+ E+ + +G D+E +FVG L V L EF
Sbjct: 158 EEAKPQANGNKRK-AEEESIAPAKKARADGGDEEATT--NVFVGQLSWNVDNDWLKSEFE 214
Query: 248 KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV 307
GE+ S R+ V D++ R Y+ F +S+ A+ + +
Sbjct: 215 SCGEVVSARV--VFDRDSQKSRG---------------FGYVEFADLESSAKAIEKDGSE 257
Query: 308 IGGNHIRLDRACPPRKKLKGED-APLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLN 361
I G IR++ A + E A +++ K+ T+++G+L F V ++++Y+ F
Sbjct: 258 IDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHG 317
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D++S VR+ KG YV F +
Sbjct: 318 DVQS----VRLPTDRDTGAPKGFGYVQFSS 343
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA E E K EG + +FVG+L V + L EF +FGEI +VR+
Sbjct: 276 KKRKAATEAEPTPKKVKTVSSAQEG--AKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRV 333
Query: 258 RSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL 315
+ D + R KG Y+ + + ++ + AL I G I +
Sbjct: 334 ----VTDRESGRSKG--------------FGYVEYTTNEAAKKALEEMKGKDIDGRTINV 375
Query: 316 DRACPPRKKLKGEDAPLYDIKK-----TVFVGNLPFDVKDEEIYQL-FCGLNDLESSVEA 369
D + P + + + + LY +K TVFV NL F+ DE+I Q F G + +
Sbjct: 376 DFSAPRPENPRQDRSRLYGDQKSPESETVFVANLSFEA-DEQIVQTEFEGFGN----IVG 430
Query: 370 VRVIRHPHMRVGKGIAYVLF 389
+R+ P KG Y+ +
Sbjct: 431 LRIPTDPESGQPKGFCYIQY 450
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 30/164 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI++GNL KV + + FI+ G P+++ IP+ + Q +
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCG----------PVVNVHIPKDKISGEHQ-------GY 62
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FKSE+ + A+ +M + G I++++A +D ++ +F+GNL
Sbjct: 63 GFVEFKSEEDADYAIKIMHMIKLYGKPIKVNKAS--------QDKRTQEVGANLFIGNLD 114
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
++ ++ +Y+ F + S+ +++R+P V KG +V +
Sbjct: 115 TEIDEKTLYETFSAFGHILST----KIMRNPETGVSKGYGFVSY 154
>gi|315047428|ref|XP_003173089.1| nucleolar protein 13 [Arthroderma gypseum CBS 118893]
gi|311343475|gb|EFR02678.1| nucleolar protein 13 [Arthroderma gypseum CBS 118893]
Length = 403
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 66/234 (28%)
Query: 183 VIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTL 242
V A E ++V EK K NET ++ GF +++GNLP ++ +
Sbjct: 59 VAAVSEGTEQVNETEKDKTDQNETNS---KKQRTGFG--------VWIGNLPFTATRE-M 106
Query: 243 IKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA 300
++ F+ K G +DS +I V I D+ R+G K AY+ F S+ E A
Sbjct: 107 LRTFLTSKSGILDS-QITRVHIPDSGAKRRGVKQNKGF--------AYVDFTSQAVVELA 157
Query: 301 LAFNMAVIGGNHIRLDRAC---------------------PPRKKLKGEDAPLYDIKKTV 339
+A + ++GG + + A PP KK +
Sbjct: 158 IALSEELVGGRRVLIKDATNFDGRVVKEAEKDDSNTVGGNPPSKK--------------I 203
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
FVGNL FD E + + F CG S+ V V KG A+V F++
Sbjct: 204 FVGNLSFDTTKELLEEHFSPCG------SISNVHVATFEDSGKCKGYAWVEFES 251
>gi|148226626|ref|NP_001080100.1| splicing factor 3b, subunit 4, 49kDa [Xenopus laevis]
gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis]
Length = 377
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ + +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINYAS 151
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329677|gb|EFH60096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL ++ + L++ F++ G P++ IP+ N
Sbjct: 26 TIYVGNLSPQLSEDLLLELFVQAG----------PVVSVFIPKDKVT-------NLQQTF 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E+ + A+ +NM + G IR+ +A +K L D+ +F+GNL
Sbjct: 69 GFVQFRNEEDADYAIKVYNMIKLYGEPIRVKKASQDKKSL--------DVGANLFIGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ +Y F + + +++R P +G ++ + +
Sbjct: 121 PDVDEKMLYDTFSAFGMV---ADHPKIMRDPDTGNPRGFGFISYDS 163
>gi|321479244|gb|EFX90200.1| hypothetical protein DAPPUDRAFT_40110 [Daphnia pulex]
Length = 268
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ L Q +
Sbjct: 14 TIYVGGLDEKVTEPLLWELFVQGG----------PVVNVHMPKDRITLLHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F SE + A NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFIEFLSEDDADYACKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPTTGNSKGFAFINFAS 151
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVSETLLWEMFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|367020688|ref|XP_003659629.1| hypothetical protein MYCTH_2296912 [Myceliophthora thermophila ATCC
42464]
gi|347006896|gb|AEO54384.1| hypothetical protein MYCTH_2296912 [Myceliophthora thermophila ATCC
42464]
Length = 327
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T FV N+ ++ ++ L K F K+G + V I P + KG +
Sbjct: 131 TAFVRNIVFELSEEHLTKAFSKYGNVTKVYIARDP----RGMSKG--------------Y 172
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPR------KKLKGEDAPLYDIKKTV 339
++ F++ + +AA N + G I C PR K+ K ++P + ++ +
Sbjct: 173 GFVSFETPEELKAACDNVNGSFWHGRRI----TCIPRATEGRQKQTKHRNSPDHPTQQ-L 227
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
FVGN+P++ D E+ +LF G+++LE VRV +G A+ F T
Sbjct: 228 FVGNIPYETTDAELNRLFRGMDNLED----VRVAVDRTTGWPRGFAHADFTT 275
>gi|148235805|ref|NP_001079609.1| heterogeneous nuclear ribonucleoprotein D-like-A [Xenopus laevis]
gi|82241529|sp|Q7ZX83.1|HNDLA_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-A;
Short=hnRNP D-like A; Short=hnRNP DL-A
gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis]
Length = 293
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
DEGK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 24 DEGKM----FIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVT---------------- 63
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L N + G I RA K LKG++ P K V
Sbjct: 64 -GRSRGFGFVLFKDAVSVDKVLETNEHKLDGKLIDPKRA----KALKGKEPP-----KKV 113
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L + +E+I Q F G ++E+
Sbjct: 114 FVGGLSPETTEEQIKQYFGGFGEIEN 139
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T +VGNL +V ++ L + F++ G P+++ +P K N +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAG----------PVVNVYVP-------KDRVTNLHQGY 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F+SE+ + A+ NM + G IR+++A +K L D+ +FVGNL
Sbjct: 69 GFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL--------DVGANLFVGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ +Y F + V +++R P +G +V + +
Sbjct: 121 PDVDEKLLYDTFSAFGVI---VTNPKIMRDPDTGNSRGFGFVSYDS 163
>gi|332028466|gb|EGI68509.1| Splicing factor 3B subunit 4 [Acromyrmex echinatior]
Length = 410
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|296193572|ref|XP_002744572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Callithrix jacchus]
Length = 256
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+ +E+I + F + +EA+ + HP + +G ++ FK R
Sbjct: 93 EATEEKIREYFGDFGE----IEAIELPMHPKLNKRRGFVFITFKER 134
>gi|327272896|ref|XP_003221220.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Anolis
carolinensis]
Length = 311
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 38 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 77
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S E L + G I RA K LKG++ P K V
Sbjct: 78 -GRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 127
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F G ++E
Sbjct: 128 FVGGLSPDTSEEQIKEYFGGFGEIE 152
>gi|60729607|pir||JC7925 nucleolin - common carp
gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio]
Length = 693
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + AL N + G ++LD+A + K +D+ +T+FV NLP+
Sbjct: 315 GYVDFASEEEMQKALGLNGKKLMGQPVKLDKA---KSKEDSQDSKKERDARTLFVKNLPY 371
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTRV 393
+ EE+ ++F E IR P G +GIAY+ FK+
Sbjct: 372 SITQEELQEVF----------EQATDIRIPMGSNGSSRGIAYLEFKSEA 410
>gi|33359633|gb|AAQ17064.1| nucleolin 2 [Cyprinus carpio]
Length = 643
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + AL N + G ++LD+A + K +D+ +T+FV NLP+
Sbjct: 263 GYVDFASEEELQKALGLNGKKLMGQPVKLDKA---KSKENSQDSKKERDSRTLFVKNLPY 319
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTRV 393
V EE+ ++F + +V+ IR P G +GIAY+ FK+
Sbjct: 320 SVTQEELKEIF------DQAVD----IRIPMGNSGSSRGIAYLEFKSEA 358
>gi|295663372|ref|XP_002792239.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279414|gb|EEH34980.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 446
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 34/183 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP KK + K G + + I + + D GA KQ + + A
Sbjct: 96 VWVGNLPFTAKKSDIRKFLTGSGTLSNEDITRIHLPD------GA---KQNGKAQNKGFA 146
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKKLKGEDAPL----------- 332
Y+ F + ++ E A+A + +I G + A P + GE A
Sbjct: 147 YVDFSTSKAMETAIAMSEQLINGRRALIKNAKSYAGRPERTKGGESAAGGREVNNSSMAA 206
Query: 333 --YDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
++ + +FVGNL FDV E + F CG S+E+V V KG A+V
Sbjct: 207 AGKELSQRIFVGNLGFDVTKEILEDHFKPCG------SIESVHVATFEDSGKCKGYAWVE 260
Query: 389 FKT 391
F++
Sbjct: 261 FES 263
>gi|307167809|gb|EFN61250.1| Splicing factor 3B subunit 4 [Camponotus floridanus]
Length = 409
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|157137418|ref|XP_001663981.1| spliceosome associated protein [Aedes aegypti]
gi|108869713|gb|EAT33938.1| AAEL013795-PA [Aedes aegypti]
Length = 362
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVSETLLWEMFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 28/170 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L V + L EF G++ R+ I +G + +
Sbjct: 179 TIFVGRLSWSVDDEWLKNEFEHIGDVIGARV---------IYERGTDRSRG--------Y 221
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-PRKKLKGEDAPLY-DI----KKTV 339
Y+ F S+ + E A+ + I G I D + P G+ A + D+ T+
Sbjct: 222 GYVDFSSKSAAERAVKEMHGKQIDGREINCDMSTSKPAGGNGGDRAKKFGDVPSQPSDTL 281
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+GNL F+ ++IY+LF ++ S VR+ HP KG YV +
Sbjct: 282 FLGNLSFNADRDQIYELFSKHGEIIS----VRLPTHPETEQPKGFGYVQY 327
>gi|358337762|dbj|GAA56093.1| splicing factor 3B subunit 4 [Clonorchis sinensis]
Length = 363
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L K + L + F++ G P+++ +P+ +Q Q +
Sbjct: 14 TIYVGGLDEKTTESILWELFLQAG----------PVVNVHMPKDRITMQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G IR+++A +K L DI +F+GNL
Sbjct: 57 GFVEFMTEEDADYAMRIMNMIKLFGKPIRVNKASANQKNL--------DIGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGYAFINFAS 151
>gi|350406084|ref|XP_003487648.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus impatiens]
Length = 413
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|384253943|gb|EIE27417.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 296
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 41/185 (22%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G R +FVG +P ++ ++ + GEI+S+ + P DT R I
Sbjct: 102 GSTERRVFVGGMPFGYEESDVLDYWSYCGEIESLDLMRFP--DTG--RFKGI-------- 149
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD---RACPPRKKLKGE---------- 328
A+I FK+E +AAL + I I+++ A P RKK + E
Sbjct: 150 -----AFITFKTEGGYKAALECDGMTIDTVQIKVEPCISAGPKRKKQRNEVVSQTNRKAH 204
Query: 329 --DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGI 384
AP + +VGN+ F+ + ++ +L G E +V RH G KG
Sbjct: 205 SGAAPKVEGYNVAYVGNIAFEAGESDLRELLAG-------CEITKVRRHTDKDTGKFKGY 257
Query: 385 AYVLF 389
A+V F
Sbjct: 258 AHVHF 262
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEI--YQLFCGLNDLESSVEAVRVIRHPHMRV 380
K++ GE P ++ VFVG +PF ++ ++ Y +CG +E++ ++R P
Sbjct: 94 KRVMGE--PSGSTERRVFVGGMPFGYEESDVLDYWSYCG------EIESLDLMRFPDTGR 145
Query: 381 GKGIAYVLFKT 391
KGIA++ FKT
Sbjct: 146 FKGIAFITFKT 156
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 27/168 (16%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+ T+++G+L + + L F GE+ SV++ I KQ N++
Sbjct: 73 VETLWIGDLQYWMDENYLYNCFSHTGEVGSVKV---------------IRNKQTNQSEG- 116
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVI--GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
+ ++ F S E L FN ++ GG + RL+ A + + +D+P Y T+FV
Sbjct: 117 -YGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDY----TIFV 171
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
G+L DV D + ++F +SV+ +V+ KG +V F
Sbjct: 172 GDLAADVSDHHLTEVF---RTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
>gi|351705667|gb|EHB08586.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 486
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus carpio]
gi|33949944|gb|AAQ55855.1| nucleolin [Cyprinus carpio]
Length = 637
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + AL N + G ++LD+A + K +D+ +T+FV NLP+
Sbjct: 263 GYVDFASEEELQKALGLNGKKLMGQPVKLDKA---KSKENSQDSKKERDSRTLFVKNLPY 319
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V EE+ ++F D+ + H +GIAY+ FK+
Sbjct: 320 SVTQEELKEIFDQAVDIPDT--------DGHSGSSRGIAYLEFKSEA 358
>gi|384500250|gb|EIE90741.1| hypothetical protein RO3G_15452 [Rhizopus delemar RA 99-880]
Length = 246
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL + + +LI E + +++ P+++ +P+ Q ++N +
Sbjct: 12 TVYVGNLDERCTE-SLIWELM---------LQAGPVVNVHLPKDRV---TQTHQN----Y 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ N + G +R+++A RK L D+ T+F+GNL
Sbjct: 55 GFVEFLTEEDADYAMRVMNQVRLYGKPVRVNKATSDRKNL--------DVGATLFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+V ++ +Y F + V RV R P KG ++ F
Sbjct: 107 PEVDEKLLYDTFSAFGLI---VNTPRVSRDPDTGALKGFGFISF 147
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 35/175 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
++FVG LP V L +EF KFG+I+S + ++ +Q +
Sbjct: 4 SVFVGGLPFDVDNDRLQQEFAKFGDIESAIV---------------MMDRQTGNSRG--F 46
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK-------- 337
Y+ F + EQ+ +A + + G +IR A P+ KG P ++
Sbjct: 47 GYVHFATHEQAKKAKEEMDGYELDGRNIRTGTATKPQP--KGAHDPSSRARQFGDKPSEP 104
Query: 338 --TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
T+FVGNL + ++ ++ LF E V+ VR+ KG YV F+
Sbjct: 105 SSTLFVGNLSWSATEDAVWGLFN-----EYGVKNVRLPTEFETGRPKGFGYVEFE 154
>gi|240848911|ref|NP_001155674.1| heterogeneous nuclear ribonucleoprotein-like [Acyrthosiphon pisum]
gi|239790977|dbj|BAH72014.1| ACYPI006706 [Acyrthosiphon pisum]
Length = 283
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + +K L + F+++GEI ++ +++ P
Sbjct: 33 RKLFVGGLSWETTEKELKEHFVQYGEITNISLKTDPAT-----------------GRSRG 75
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+I+FKS A A VI G I P + K K E VFVG LP
Sbjct: 76 FAFIIFKSVDGLNNAFAAGDHVINGKKID-----PKKAKAKQE---------KVFVGGLP 121
Query: 346 FDVKDEEIYQLF 357
DV ++EI + F
Sbjct: 122 SDVTNDEIKEFF 133
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|383857497|ref|XP_003704241.1| PREDICTED: splicing factor 3B subunit 4-like [Megachile rotundata]
Length = 413
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 37/177 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + + L +EF G + S R+ I+++ ++ +
Sbjct: 199 TLFVGRLSWSIDDEWLRREFEPVGGVISARV---------------IMERSTGKSRG--Y 241
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD------RACPP---RKKLKGE--DAPLYD 334
Y+ F S+ + E AL + + G I LD A P R K G+ AP
Sbjct: 242 GYVDFDSKSAAEKALQEYQGKELDGRPINLDMSTGKPHASNPNTDRAKQFGDVPSAP--- 298
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+FVGNL F+ + + ++ F +V + R+ HP + KG YV F +
Sbjct: 299 -SDTLFVGNLSFNAERDSLFNTFGEYG----TVVSCRIPTHPDTQQPKGFGYVQFSS 350
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL ++ +L F ++G + S RI + P DT+ P+
Sbjct: 301 TLFVGNLSFNAERDSLFNTFGEYGTVVSCRIPTHP--DTQQPKG---------------F 343
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S +AAL A N + G RLD + P
Sbjct: 344 GYVQFSSVDEAKAALEALNGEYLDGRACRLDFSTP 378
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+ T+FVG L + + L KEF G + R+ ++++ +
Sbjct: 125 ITTLFVGRLSWSIDDEWLKKEFEHIGGVVGARV---------------MMERATGRSRG- 168
Query: 285 VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRAC--PPRKKLKGED-APLYDIKK--- 337
+ Y+ F ++ S E AL I G I +D + P + D A Y K+
Sbjct: 169 -YGYVDFDNKASAEKALEEMQGKEIDGRPINVDMSNSKPAAPAARNNDRASQYGDKRSPP 227
Query: 338 --TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+F+GNL F + +++LF +V +VR+ HP KG YV F +
Sbjct: 228 SDTLFLGNLSFQADRDTLFELFS----KHGNVTSVRIPTHPETEQPKGFGYVQFSS 279
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + + TL + F K G + SVRI + P +T+ P+
Sbjct: 230 TLFLGNLSFQADRDTLFELFSKHGNVTSVRIPTHP--ETEQPKG---------------F 272
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACP 320
Y+ F S +++T A A N + IRLD + P
Sbjct: 273 GYVQFSSVDEATGALEALNGEYVDNRPIRLDYSTP 307
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 23/165 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNLP V L F + G ++ V + I D R
Sbjct: 88 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEV----IYDKLTGRSRGF-------------G 130
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
++ S + EAA+ FN ++ G +R++ PP ++ + AP + + V+VGNL +
Sbjct: 131 FVTMSSVEEVEAAVEQFNGYILDGRSLRVNSGPPPPREQSSQRAPRGEANR-VYVGNLSW 189
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V + + LF G E V +VI +G +V + +
Sbjct: 190 GVDNAALANLFSG----EGEVLEAKVIYDRESGRSRGFGFVTYGS 230
>gi|440640811|gb|ELR10730.1| hypothetical protein GMDG_04988 [Geomyces destructans 20631-21]
Length = 518
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 22/174 (12%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV--PIIDTKIPR---KGAILQKQINENA 282
I+VGNLP V K+ L I G + I + P D K P + + Q N+
Sbjct: 208 IWVGNLPWSVSKEDLKSFLINQGPMPEEAITRIHMPSPDDKKPANKVESRFTRTQHNKG- 266
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL--DRACPPRKKLKGEDAPLYDIK---K 337
AY+ F + + T AA+A + ++GG + + +++ R + + A + K K
Sbjct: 267 ---FAYVDFTTAEHTLAAVALSEELLGGRRVLIKNNKSFEGRPLVAKDAAAKKETKAPSK 323
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
VF+GNL FD +E + + F CG +E V KG A++ F
Sbjct: 324 RVFLGNLRFDTTEESLKEHFERCG------PIETCMVATFEDSGKCKGYAWITF 371
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G KRK E E + +K D E + +FVG L V L EF GE+ S
Sbjct: 167 GNKRKA---EGESVAPAKKARADDGEEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSA 223
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL 315
R+ + D + Y+ F +++ A+ + + I G IR+
Sbjct: 224 RV----VFDR-------------DSQKSRGFGYVEFADLEASAKAIEKDGSEIDGRAIRV 266
Query: 316 DRACPPRKKLKGED-APLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
+ A + E A +++ K+ T+++G+L F V ++++Y+ F D++S
Sbjct: 267 NYATQRKPNEAAEKRAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQS---- 322
Query: 370 VRVIRHPHMRVGKGIAYVLFKT 391
VR+ KG YV F +
Sbjct: 323 VRLPTDRDTGAPKGFGYVQFSS 344
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T +VGNL +V ++ L + F++ G P+++ +P+ N +
Sbjct: 26 TAYVGNLDSQVSEELLWELFVQAG----------PVVNVYVPKDRVT-------NLHQGY 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F+SE + A+ NM + G IR+++A +K L D+ +FVGNL
Sbjct: 69 GFIEFRSEDDADYAIKILNMIKLYGKPIRVNKASQDKKSL--------DVGANLFVGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
DV ++ +Y F + V +++R P +G ++ + +
Sbjct: 121 PDVDEKLLYDTFSAFGVI---VTNPKIMRDPDSGNSRGFGFISYDS 163
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F K G + S +I I E +
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK--TVFVG 342
+A+I + + Q+ AL A N V I+++ A P + P DI +FVG
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRVFLDKEIKVNWATSPG------NTPKTDISSHHHIFVG 100
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+L +++ E + + F ++ + R++R P KG A+V F
Sbjct: 101 DLSPEIETETLREAFAPFGEISN----CRIVRDPQTMKSKGYAFVSF 143
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 31/168 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNL +V L + F +FG+I+SVR+ + D + +G A
Sbjct: 138 LYIGNLYYEVTPDQLKRVFSRFGDIESVRM----VYDNRGLSRG--------------FA 179
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLK-----GEDAPLYDIKKTVFV 341
Y+ +K+ +AA+ +M V G ++ + P + K GE P KT+F+
Sbjct: 180 YVEYKNVSDAQAAIDNLDMQVFEGRNLVVQYHSPKYQTTKARSPNGEPNP---PTKTLFI 236
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
GN+ F++ D+++ LF + + V VRV +G A+ F
Sbjct: 237 GNMSFEMSDKDLNDLFRDIRN----VTDVRVAIDRRTGQPRGFAHADF 280
>gi|403372370|gb|EJY86082.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 695
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 46/224 (20%)
Query: 183 VIAKEEEGKKVGVG----EKRKKADNETEDM-----------LVHRKEEGFDDEGKLLRT 227
V+ + K +G G +++AD +DM +VH + FD K
Sbjct: 116 VVLHKRTSKPLGYGYLQFNSKEEADRCLQDMNNYVLNGQALRIVHSVSK-FDYNPK--AN 172
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+ V NL +V ++ L F +FG+I S+++ + P + + +A
Sbjct: 173 LLVKNLDKEVTQQELFDSFKQFGDIQSLKLETYP------------------DGSSRGYA 214
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I F+SE+ E AL A N A I G I ++R +K + P +FV NLP
Sbjct: 215 FIQFQSEEEAEKALNAMNQAEIKGKKIEINR----HEKKATRENPQQTKFNNLFVKNLPK 270
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
D+++ LF ++ES V V R + K YV FK
Sbjct: 271 GTDDDQLKGLFGKFGEIES----VTVQRDEQGNL-KDYGYVCFK 309
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|48097884|ref|XP_393914.1| PREDICTED: splicing factor 3B subunit 4 [Apis mellifera]
Length = 413
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|380011609|ref|XP_003689892.1| PREDICTED: splicing factor 3B subunit 4-like [Apis florea]
Length = 413
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|378727233|gb|EHY53692.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 381
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 22/141 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL V + L+KE +FG + +I + DT+ KG
Sbjct: 185 TLYVGNLFFDVTETDLVKEMARFGTVTRCKI----VRDTRGLSKG--------------F 226
Query: 287 AYIVFKSEQSTEAALAF-NMAVIGGNHIRLDRACPPRKKLKGEDA---PLYDIKKTVFVG 342
Y+ F ++++ +AAL NM + G I + A + + P+ KT+F+G
Sbjct: 227 GYVDFSTQEAADAALEALNMQMFEGRRITVQYAARSSGMMDTPNTTRRPMNPPSKTLFIG 286
Query: 343 NLPFDVKDEEIYQLFCGLNDL 363
N+ F++ D ++ LF G+ ++
Sbjct: 287 NMSFEMTDRDLSNLFRGIRNV 307
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 43/205 (20%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E + K EG T+F GNL + L + F +F + R+
Sbjct: 239 KKRKADEEIDATPKKAKTEG-------APTLFAGNLSWNIDDNALAEAFKEFEGLVGARV 291
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLD 316
+ D R G + Y+ F++ E +T+A A + G + LD
Sbjct: 292 ----VTD----RDGGRSRG---------FGYVDFETPEAATKAYEAMQGFELDGRPLNLD 334
Query: 317 RA------------CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
A R K G+ + +T+F+GNLPFD E + Q F +
Sbjct: 335 YANTRPAESNPRDRATDRAKKHGDS--VSPESETLFIGNLPFDTDQETVRQFFAEV---- 388
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF 389
+ V +VR+ P KG YV F
Sbjct: 389 AEVTSVRLPTDPDSGNLKGFGYVSF 413
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F K G + S +I I E +
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N V I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRVFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R P KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPQTMKSKGYAFVSF 143
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + AP+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKAPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L EF G + S R+ I +G+ + +
Sbjct: 237 TIFVGRLSWNIDDQWLKNEFEHIGGVQSARV---------IYERGSTRSRG--------Y 279
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-----PR--KKLKGEDAPLYDIKKT 338
Y+ F + E A+ + + G I D + PR + + D P + T
Sbjct: 280 GYVDFTDKSYAEKAVKEMHGKELDGRPINCDMSTSKPTVNPREDRAKRFGDMPS-EPSDT 338
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+F+GNL F+ ++IY+LF V +VR+ HP KG YV + +
Sbjct: 339 LFLGNLSFNADRDQIYELFS----PHGEVISVRIPTHPETEQPKGFGYVQYAS 387
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 80/212 (37%), Gaps = 44/212 (20%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA E E +K + ++E +F+GNL V + L +EF FGE+ VRI
Sbjct: 234 KKRKA--EEESASTPKKSKQAEEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRI 291
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRL- 315
+ D R Y+ + S A + G I L
Sbjct: 292 ----VTDRDSGRSRGF-------------GYVEYVSAADAAKAYKAKKDTELDGRKINLD 334
Query: 316 ----------------DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG 359
DRA + + +P D T+FVGNLPF ++ + +LF
Sbjct: 335 YATGRPANNQQGGGFQDRAQARARSFGDQSSPESD---TLFVGNLPFSANEDSVQELFG- 390
Query: 360 LNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ S+ +R+ P KG YV F +
Sbjct: 391 ---EKGSIVGIRLPTDPDSGRPKGFGYVQFAS 419
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 34/174 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L V ++ L++EF +FGE+ S RI + D + +
Sbjct: 2 TLFVGGLSWNVDEEWLMREFEEFGELASTRI----MTDRETGKSKGF------------- 44
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLD--------RACPPRKKLKGEDAPLYDIKK 337
++ FKS + + +A I G ++RLD P+++ D+ K
Sbjct: 45 GFVEFKSVDGAIKAVEGKQGGEIDGRNVRLDFTEGRSQNNQRTPQQRSSDRAGKFGDVPK 104
Query: 338 ----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
T+FVGN+ FD ++ + ++F S++AVR+ KG YV
Sbjct: 105 EPSSTLFVGNVSFDANEDMVTEVFSEYG----SIKAVRLPTDRDTGALKGFGYV 154
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL L ++ L + F++ G P+++ +P+ NA +
Sbjct: 9 TIYVGNLDLACTEEILWEVFVQAG----------PVVNVYVPKDRV-------SNAHQGY 51
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G +R+++A +K D+ +FVGNL
Sbjct: 52 GFVEFANEEDADYAIKVLNMIKLHGKPVRVNKASQDKKS--------NDVGANLFVGNLD 103
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + + +++R P +G +V + +
Sbjct: 104 SELDEKLLYDTFSAFGVV---ITTPKIMRDPDSGNSRGFGFVSYDS 146
>gi|307208549|gb|EFN85888.1| Splicing factor 3B subunit 4 [Harpegnathos saltator]
Length = 429
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDS-VRIRSVPIIDTKIPRKGAILQKQINENADSV 285
TI+VG L KV + + + F++ G + + I + +++ +P+ Q+++
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSGPVGMYIYISFMHVLNVHMPKDRV---TQMHQG---- 66
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ ++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 67 YGFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNL 118
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 119 DPEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 162
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + AP+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKAPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 28/172 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L V + L +EF + G + S R+ ++++ ++ +
Sbjct: 182 TLFVGRLSWNVDDEWLKREFEEAGGVISARV---------------MIERSTGKSRG--Y 224
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC-PPRKKLKGEDAPLY-DIKK----TV 339
Y+ F S+ + E AL I G + LD + P+ + A + D+ T+
Sbjct: 225 GYVDFSSKAAAEKALNELQGKEIDGRPVNLDMSTGKPKTPASNDRAKKFGDVPSAPSDTL 284
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
F+GNL F+ + +++++F +V + R+ HP + KG YV F +
Sbjct: 285 FIGNLSFNTERNKLFEIFGEYG----TVVSCRLPTHPDTQQPKGFGYVQFSS 332
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ ++++ P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMQDPDTGNSKGYAFINFAS 151
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 32/172 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L V + L EF G + S R+ I+++ + + +
Sbjct: 150 TLFVGRLSWSVDDEWLKNEFAPIGGVVSARV---------------IMERGTDRSRG--Y 192
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDR--------ACPPRKKLKGEDAPLYDIKK 337
Y+ F+ E AL I G I +D A R K G D P +
Sbjct: 193 GYVDFEDISYAEKALKEMQGKEIDGRPINVDMSTSKPAGGASNDRAKKFG-DVP-SEPSD 250
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
T+F+GNL FD + +Y++F ++ S VR+ HP KG YV +
Sbjct: 251 TLFLGNLSFDADRDNLYEIFGKFGEIIS----VRIPTHPETEQPKGFGYVQY 298
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
T+F+GNL + L + F KFGEI SVRI + P +T+ P+ +Q E+A
Sbjct: 251 TLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHP--ETEQPKGFGYVQYTNTEDA 304
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L KEF G + S R+ I +G + +
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARV---------INERGTDRSRG--------Y 184
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPP--------RKKLKGEDAPLYDIKK 337
Y+ F+++ E A+ I G I D + R K G D P +
Sbjct: 185 GYVDFENKSYAEKAIQEMQGKEIDGRPINCDLSTSKPAGNNTNDRAKKFG-DTP-SEPSD 242
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+F+GNL F+ + I++LF V +VR+ HP KG YV F +
Sbjct: 243 TLFLGNLSFNADRDTIFELFA----KHGEVVSVRIPTHPETEQPKGFGYVQFSS 292
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + T+ + F K GE+ SVRI + P +T+ P+
Sbjct: 243 TLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHP--ETEQPKG---------------F 285
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S + ++ AL + I +RLD + P
Sbjct: 286 GYVQFSSLEDSKKALESLQGEYIDNRPVRLDYSSP 320
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 37/206 (17%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E K E D+ L F+GNL + ++ L +EF FGE+ VRI
Sbjct: 200 KKRKAEEEPATSAKKSKTESADNSSNL----FIGNLSWNIDEEWLRREFESFGELSGVRI 255
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ +++ + Y+ + S +AA + G I LD
Sbjct: 256 ---------------MTERETGRSRG--FGYVEYADAASAKAAYEAKKDTELDGRTINLD 298
Query: 317 RACP-------PRKKLKGEDAPLYDI----KKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
A P PR+K + D T+F+GNL F V + + ++F + +
Sbjct: 299 YAKPRDANAQAPREKAQTRARSFGDQTSPESNTLFLGNLVFGVDENAVREVF----ESQG 354
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKT 391
+++ +R+ P KG YV F +
Sbjct: 355 TIQGIRLPTDPETGRPKGYGYVEFSS 380
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ +M + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V ++ L+ F K G + S +I I E +
Sbjct: 7 KTLYVGNLDGTVSEELLVALFGKMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK--TVFVG 342
+A+I + + Q+ AL A N V I+++ A P + P DI +FVG
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRVFLDKEIKVNWATSPG------NTPKTDISSHHHIFVG 100
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+L +++ E + + F ++ + R++R P KG A+V F
Sbjct: 101 DLSPEIETETLREAFAPFGEISN----CRIVRDPQTMKSKGYAFVSF 143
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 40/183 (21%)
Query: 185 AKEEEGKKVGVGEKRKKADN--ETEDMLVHRKEEGFDD---EGKLLRTIFVGNLPLKVKK 239
A+EEEG+ +G D E+ED + GF + E KL FVGNLP V
Sbjct: 77 AEEEEGEDGSIGGTSVTVDESFESEDGV------GFPEPPEEAKL----FVGNLPYDVDS 126
Query: 240 KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAY---IVFKSEQS 296
+ L F + G ++ I + N + D + + E++
Sbjct: 127 QALAMLFEQAGTVE-------------------ISEVIYNRDTDQSRGFGFVTMSTVEEA 167
Query: 297 TEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIKKTVFVGNLPFDVKDEEIYQ 355
+A FN + G + ++RA P + + E P +YD ++VGNLP+DV + +
Sbjct: 168 EKAVEKFNSFEVNGRRLTVNRAAP--RGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLER 225
Query: 356 LFC 358
LF
Sbjct: 226 LFS 228
>gi|339244657|ref|XP_003378254.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972855|gb|EFV56501.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 432
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 35/169 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L +V + L + F++ G PI+ +P+ + S H
Sbjct: 14 TIYVGGLDERVSETILWELFVQAG----------PIVSVHMPK----------DRISSTH 53
Query: 287 ---AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
++ F E+ + A+ NM + G IR+++A +K L DI VF+G
Sbjct: 54 QGYGFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DIGANVFIG 105
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
NL +V ++ +Y F L ++ +++R P KG A++ F +
Sbjct: 106 NLDPEVDEKLLYDTFSAFGVL---LQVPKIMRDPETGNSKGFAFINFAS 151
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL + V++ L F + G + +I I E +
Sbjct: 8 KTLYVGNLDISVQEDLLCALFSQIGPVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + QS AL A N V ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQSASTALIAMNKRVFLDKEMKVNWATSPGNQPKTDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ + + + F ++ + R++R P KG A+V F
Sbjct: 104 SPEIETDTLREAFAPFGEISN----CRIVRDPQTLKSKGYAFVSF 144
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 30/210 (14%)
Query: 188 EEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFI 247
EE K G KRK A+ E + +G D+E +FVG L V L EF
Sbjct: 161 EEAKPQTNGNKRK-AEEEPAAPAKKARADGGDEEATT--NVFVGQLSWNVDNDWLKSEFE 217
Query: 248 KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV 307
GE+ S R+ + D + Y+ F S+ A+ + +
Sbjct: 218 SCGEVVSARV----VFDR-------------DSQKSRGFGYVEFADLGSSAKAIEKDGSE 260
Query: 308 IGGNHIRLDRACPPRKKLKGED-APLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLN 361
I G IR++ A + E A +++ K+ T+++G+L F V ++++Y+ F
Sbjct: 261 IDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHG 320
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D++S VR+ KG YV F +
Sbjct: 321 DVQS----VRLPTDRDTGAPKGFGYVQFSS 346
>gi|312375219|gb|EFR22634.1| hypothetical protein AND_14423 [Anopheles darlingi]
Length = 413
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L K + L + F++ G P+++ +P+ Q+++ +
Sbjct: 14 TIYVGGLDDKATETLLWELFVQSG----------PVVNVHMPKDRV---TQMHQG----Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKSL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 LEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFAS 151
>gi|405961983|gb|EKC27707.1| Splicing factor 3B subunit 4 [Crassostrea gigas]
Length = 405
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG+L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TVYVGSLDDKVTEAILWELFLQAG----------PVVNVHMPKDRVTQSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|125982457|ref|XP_001355096.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
gi|54643408|gb|EAL32152.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
Length = 341
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSESLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P K A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFAS 151
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + L +EF G + S R+ I+++ ++ +
Sbjct: 4 TLFVGRLSWNIDDDWLKREFEPSGGVISARV---------------IMERATGKSRG--Y 46
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACP-PRKKLKGEDAPLY-DI----KKTV 339
Y+ F+S+ E AL F I G I LD + P+ K + A + D+ T+
Sbjct: 47 GYVDFESKADAEKALQDFQGKEIDGRPINLDLSTSKPQTPAKNDRAKKFGDVVSAPSDTL 106
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+GNL F+ +++++ F + V + R+ HP + KG YV +
Sbjct: 107 FIGNLSFNATRDKLFEAFGQYGE----VISCRIPTHPDTQQPKGFGYVQY 152
>gi|126314629|ref|XP_001373122.1| PREDICTED: nucleolin-like [Monodelphis domestica]
Length = 705
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 50/183 (27%)
Query: 221 EGKLLRT-----IFVGNLPL---KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
EGK T +F GNL + KT I +F F + D + ++D +I
Sbjct: 283 EGKYTETSTNFNLFAGNLNFNKTAAELKTAITDF--FAKKD------LTVVDVRI----- 329
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
A Y+ F+S + E AL + + + G+ ++L++A ++ K DA
Sbjct: 330 --------GATRKFGYVEFESAEDMEKALELSGSKVLGSEMKLEKA---KENKKDRDA-- 376
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFK 390
+T+FV NLP+ V EE+ ++F E ++E IR + G KGIAYV FK
Sbjct: 377 ----RTLFVKNLPYKVTQEELKEVF------EDAIE----IRLVCTKDGTPKGIAYVEFK 422
Query: 391 TRV 393
T
Sbjct: 423 TEA 425
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 27/168 (16%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++T+++G+L + + L F GE+ SV++ ++ ++N ++
Sbjct: 71 VKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKV----------------IRNKLNNQSEG 114
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVI--GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
+ ++ F S E L +N ++ GG + RL+ A + + +D+P Y T+FV
Sbjct: 115 -YGFLEFISRAGAERVLQTYNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDY----TIFV 169
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
G+L DV D + ++F +SV+ +V+ + KG +V F
Sbjct: 170 GDLAADVSDHHLTEVF---RTRYNSVKGAKVVIDRNTGRSKGYGFVRF 214
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 23/165 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNLP V L F + G ++ V + I D R
Sbjct: 88 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEV----IYDKLTGRSRGF-------------G 130
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
++ S + EAA+ FN ++ G +R++ PP ++ AP + + V+VGNL +
Sbjct: 131 FVTMSSVEEVEAAVEQFNGYILDGRSLRVNSGPPPPREQSSRRAPRGEANR-VYVGNLSW 189
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V + + LF G E V +VI +G +V + +
Sbjct: 190 GVDNAALANLFSG----EGEVLEAKVIYDRESGRSRGFGFVTYGS 230
>gi|261197860|ref|XP_002625332.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595295|gb|EEQ77876.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|327355588|gb|EGE84445.1| hypothetical protein BDDG_07390 [Ajellomyces dermatitidis ATCC
18188]
Length = 301
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 30/136 (22%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL +V + L ++ KFG I SVRI + D++ +G
Sbjct: 88 TIYVGNLFFEVTAEDLKRDLAKFGTIHSVRI----VYDSRGLSRG--------------F 129
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDR----ACPPRKKLKGEDAPLYDIKKTVFV 341
AY+ F S E + A NM++ G I ++ + P+ + G KT+F+
Sbjct: 130 AYVQFDSIEAAEAAIAELNMSLYEGRRIVVNYSTRGSTEPKTRATGP-------TKTLFI 182
Query: 342 GNLPFDVKDEEIYQLF 357
GNL F++ D E+ ++F
Sbjct: 183 GNLSFEMTDRELNEMF 198
>gi|327306303|ref|XP_003237843.1| RNA binding protein Rnp24 [Trichophyton rubrum CBS 118892]
gi|326460841|gb|EGD86294.1| RNA binding protein Rnp24 [Trichophyton rubrum CBS 118892]
Length = 391
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 27/175 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP ++ +++ F+ K G +DS +I V I D+ + RKG K
Sbjct: 91 VWIGNLPFTATRE-MLRTFLTSKSGILDS-QITRVHIPDSGMKRKGVKQNKGF------- 141
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC----PPRKKLKGED---APLYDIKKT 338
AY+ F S++ A+ + ++GG + + A K+ G+D A
Sbjct: 142 -AYVDFTSQEIVGRAIQLSEELVGGRRVLIKDATNFDGRVVKEANGDDLKTAGGNPPSTK 200
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+FVGNL FD E + + F CG S+ + V KG A+V F++
Sbjct: 201 IFVGNLSFDTTKEHLEEHFSPCG------SISNIHVATFEDSGKCKGYAWVEFES 249
>gi|357631625|gb|EHJ79094.1| hypothetical protein KGM_15573 [Danaus plexippus]
Length = 886
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 52/251 (20%)
Query: 147 QNSNFSVEGKKRSENK----KTKKRKRDDVEKDYVEKK--YGVIAKEEEGKKVGVGEKRK 200
Q SN +GK++S+N K K++K D+++ D EK GV ++ V + KR
Sbjct: 579 QKSN---KGKRKSDNTSEEVKVKRKKDDNMDVDESEKDGDSGVKRPHDDNDHV-IETKRP 634
Query: 201 KADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV 260
+ D+ +ED + G+ T+FV NL K + L + +FGEI S+R+R+
Sbjct: 635 RKDSSSEDAV-----------GREACTLFVSNLDFKFNENNLRNKLSEFGEIVSMRVRA- 682
Query: 261 PIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
+ S+ Y +K+ +S + AL + V+ G + L R
Sbjct: 683 ----------------GVKAFGGSI-CYCQYKTTESVDEALKHDRTVLDGRPMFLSRYSS 725
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE----EIYQLFCGLNDLESSVEAVRVIRHP 376
+ K + A + K +FV NLPF + EI+ + LND +R++
Sbjct: 726 KKTKPTFKYAMTTE-KNKLFVRNLPFSHCTKEALAEIFDKYGKLND-------IRIVTFK 777
Query: 377 HMRVGKGIAYV 387
+ KG+AY+
Sbjct: 778 DGK-PKGLAYI 787
>gi|401885764|gb|EJT49852.1| RNA-binding protein rnp24 [Trichosporon asahii var. asahii CBS
2479]
Length = 413
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 29/181 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
++++GNL + ++ L +EFI+ G I + + + +P+K Q EN
Sbjct: 124 SVWIGNLSFRTSEQAL-REFIETG-ITELGGEAGCVTRLNLPKKAG--HGQFAENKG--F 177
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDR---------ACPPRKKLKGEDAPLYDIKK 337
AY F +E AL + + G + + R A P+ G +++
Sbjct: 178 AYCDFTNEAMMLLALGLSERPLEGRRLLIKRGDDHRANPDARTPKTLPSGPGTAPSILQR 237
Query: 338 -------TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
T+FVGNLPFDV +EE L DL S + RV + KG A+ FK
Sbjct: 238 QKNPESATLFVGNLPFDVTEEE-------LRDLRSGLIKTRVAQFEDTGRCKGFAFWDFK 290
Query: 391 T 391
+
Sbjct: 291 S 291
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ VP
Sbjct: 61 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVP----------------- 99
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 100 NTGRSKGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 148
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 149 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKTNKRRGFVFITFK 197
>gi|194896158|ref|XP_001978424.1| GG19577 [Drosophila erecta]
gi|190650073|gb|EDV47351.1| GG19577 [Drosophila erecta]
Length = 339
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P K A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFAS 151
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA++E E++ +K + +EG L F+GNL V ++ L EF +FGE+ VRI
Sbjct: 234 QKRKAEDEEEEVSAPKKTKVDSNEGGNL---FIGNLSWNVDEEWLRSEFEEFGELAGVRI 290
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ D R + AD+ A+ K + L + A N +R
Sbjct: 291 ----VTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPKER 346
Query: 318 ACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPH 377
A + + +P D T+F+GN+ F + I + F S+ VR+ P
Sbjct: 347 AQSRAQNFGDQTSPESD---TLFIGNIAFSANENMISEAFA----EHGSILGVRLPTDPE 399
Query: 378 MRVGKGIAYVLFKT 391
KG YV F +
Sbjct: 400 SGRPKGFGYVQFSS 413
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 30/164 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL KV ++ + + F++ G I ++ IPR K NE+ S +
Sbjct: 21 TLYVGNLDTKVNEELVWELFLQCGAI----------VNVHIPR-----DKVTNEH--SGY 63
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FK+E+ + A+ +M + G I++++A +D ++ VFVGNL
Sbjct: 64 GFVEFKTEEDADYAIKIMHMVKLFGKPIKVNKAS--------QDKRTQEVGANVFVGNLH 115
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
DV ++ + +F + S+ +++R P +V K +V +
Sbjct: 116 EDVDEKMLRDVFSSFGIVLST----KIMRDPETQVSKRYGFVSY 155
>gi|449542314|gb|EMD33293.1| hypothetical protein CERSUDRAFT_117920 [Ceriporiopsis subvermispora
B]
Length = 478
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
R DR+ PPR+ L P Y T F+GNLPFD+ D ++ F G + ++V++I
Sbjct: 56 RPDRSGPPREDLPLPTEPPY----TAFIGNLPFDLTDGDLEDYFAG-----QATKSVKII 106
Query: 374 RHPHMRVGKGIAYVLF 389
+ R KG Y+ F
Sbjct: 107 KDRDDRP-KGFGYIEF 121
>gi|195174722|ref|XP_002028121.1| GL21313 [Drosophila persimilis]
gi|194115861|gb|EDW37904.1| GL21313 [Drosophila persimilis]
Length = 341
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSESLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P K A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFAS 151
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 69/174 (39%), Gaps = 35/174 (20%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G +D GK+ FVG L KK L F KFGE+ I+ +D + R
Sbjct: 67 GEEDAGKM----FVGGLSWDTSKKDLKDYFSKFGEVTDCTIK----MDQQTGRSRGF--- 115
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
+I+FK S + L + G I RA +K +I
Sbjct: 116 ----------GFILFKDAASVDKVLEQKEHRLDGRQIDPKRAMAMKK----------EIV 155
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
K +FVG L D+ EEI + F ++E+ + + + P +G ++ +K
Sbjct: 156 KKIFVGGLKPDLSKEEIEEYFGAFGEIET----IELPQDPKTEKRRGFVFITYK 205
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 40/209 (19%)
Query: 198 KRKKADNETEDMLVHRK--EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
K++KA+ E + K EE EG ++ +FVGNL + + L +EF FGEI
Sbjct: 206 KKRKAEEAAEPAIKKTKTVEEPAGAEG--IKNLFVGNLSWNIDEDWLRREFEGFGEIVGC 263
Query: 256 RIRSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFK-SEQSTEAALAFNMAVIGGNHI 313
RI I D + R KG Y+ F S + +A + + G +
Sbjct: 264 RI----ITDRETGRGKG--------------FGYVEFATSADAAKAQAEMHQYELDGRPL 305
Query: 314 RLDRACPPRKKLKG---EDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLES 365
+D + P +K G + A Y K+ T+F+GNL FD ++ I ++F ++
Sbjct: 306 NVDFSTPRQKPDAGKTNDRANKYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNI-- 363
Query: 366 SVEAVRVIRHPHMRVG--KGIAYVLFKTR 392
RV G KG YV F ++
Sbjct: 364 ----TRVSLPTDRDTGSIKGFGYVDFGSQ 388
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L KEF G + S R+ I +G + +
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARV---------INERGTDRSRG--------Y 184
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPP--------RKKLKGEDAPLYDIKK 337
Y+ F+++ E A+ I G I D + R K G D P +
Sbjct: 185 GYVDFENKSYAEKAIQEMQGKEIDGRPINCDLSTSKPAGNNTNDRAKKFG-DTP-SEPSD 242
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+F+GNL F+ + I++LF V +VR+ HP KG YV F +
Sbjct: 243 TLFLGNLSFNADRDTIFELFA----KHGEVVSVRIPTHPETEQPKGFGYVQFSS 292
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + T+ + F K GE+ SVRI + P +T+ P+
Sbjct: 243 TLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHP--ETEQPKG---------------F 285
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S + ++ AL + I +RLD + P
Sbjct: 286 GYVQFSSLEDSKKALESLQGEYIDNRPVRLDYSSP 320
>gi|195469914|ref|XP_002099881.1| GE16738 [Drosophila yakuba]
gi|194187405|gb|EDX00989.1| GE16738 [Drosophila yakuba]
Length = 339
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P K A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFAS 151
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + L F + G + S +I I E +
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKI--------------------IREASSDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + QS + AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 48 YAFIEYANHQSAQTALAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R P +G A+V F
Sbjct: 104 SPEIETETLREAFAPFGEISN----CRIVRDPQTLKSRGYAFVSF 144
>gi|194762578|ref|XP_001963411.1| GF20385 [Drosophila ananassae]
gi|190629070|gb|EDV44487.1| GF20385 [Drosophila ananassae]
Length = 341
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P K A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFAS 151
>gi|452820612|gb|EME27652.1| splicing factor 3B subunit 4 [Galdieria sulphuraria]
Length = 265
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ L + ++ G P+ IPR Q Q +
Sbjct: 24 TLYVGNLDERVSEELLWELMVQVG----------PVKHVYIPRDRITGQTQ-------GY 66
Query: 287 AYIVFKSEQ-STEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FK+E + A NM + +RL +A ++ + DI +FVGNL
Sbjct: 67 GFVEFKNEMDAIYATKVLNMVRVYAKPLRLQQASTDKRSM--------DIGANLFVGNLS 118
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+V ++ +Y F + +E ++R P KG ++ F
Sbjct: 119 QEVDEKLLYDTFSAFGAI---IETPHIMRDPETGESKGYGFIKF 159
>gi|301615885|ref|XP_002937390.1| PREDICTED: nucleolin [Xenopus (Silurana) tropicalis]
Length = 705
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ E AL + I G+ +++++A K E+ D +T+FV N+P+
Sbjct: 335 GYVDFSSEEEVEQALKLSGKKILGSEVKIEKAMAFDKNKNAENKKERD-SRTLFVKNIPY 393
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLF 389
EE+ ++F E + IR P + G KGIAYV F
Sbjct: 394 STTAEELQEIF----------ENAKDIRIPTGKDGANKGIAYVEF 428
>gi|71896741|ref|NP_001026313.1| heterogeneous nuclear ribonucleoprotein D-like [Gallus gallus]
gi|82233707|sp|Q5ZI72.1|HNRDL_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|53136484|emb|CAG32571.1| hypothetical protein RCJMB04_29l7 [Gallus gallus]
Length = 301
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 28 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 67
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S E L + G I RA K LKG++ P K V
Sbjct: 68 -GRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 117
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 118 FVGGLSPDTSEEQIKEYFGAFGEIEN 143
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R PH KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSF 143
>gi|157110304|ref|XP_001651043.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878767|gb|EAT42992.1| AAEL005515-PE [Aedes aegypti]
Length = 285
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHGK-------IFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDL 363
++ DEEI F ++
Sbjct: 125 TEISDEEIKTFFGQFGNI 142
>gi|225559580|gb|EEH07862.1| nucleolar protein 13 [Ajellomyces capsulatus G186AR]
Length = 422
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 27/175 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP VKK + F G + S I + + + KQ + + A
Sbjct: 87 VWVGNLPFVVKKDDIRAFFTSSGTLKSSDITRIHLPEGP---------KQNGKAQNKGFA 137
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHI----------RLDRACPPRKKLKGEDAPLYDIKK 337
Y+ F S ++ E A+A + +I G R D+ K + +
Sbjct: 138 YVDFTSNEAMETAIAMSEQLINGRRALIKNAKSFVGRPDKPNDEATSNKASKLSAHAPSR 197
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
VFVGNL FDV E + + F CG+ +E +++ KG A++ F+
Sbjct: 198 RVFVGNLGFDVTKEILEEHFKPCGV------IEHIQLATFQDSGKCKGYAWIEFE 246
>gi|440632502|gb|ELR02421.1| hypothetical protein GMDG_05479 [Geomyces destructans 20631-21]
Length = 294
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 23/132 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+++VGNL +V + L +EF +GEI + RI P +G L K
Sbjct: 104 SVYVGNLLFEVTPQDLEREFAPYGEIVTSRIAQDP--------RG--LSKGF-------- 145
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
YI F+ +S A+ N + G + ++ R K ++ P KT+F+GNL
Sbjct: 146 GYIEFRDIESARNAIEQRNQTIFEGRRLIVNYMAKTRSNAKSKNPP----SKTLFIGNLA 201
Query: 346 FDVKDEEIYQLF 357
F++ D ++ +LF
Sbjct: 202 FEMTDADLNKLF 213
>gi|47220951|emb|CAG03484.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F SE+ A+ N + G ++LD P K+ ED D + T+FV NLP
Sbjct: 246 FGYVDFASEEDMHKAMELNGKKVMGQELKLDM--PRSKETAQEDKKERDTR-TLFVKNLP 302
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ +E+ ++F E +V+ IR P + G +GIAY+ FKT
Sbjct: 303 YSATADELKEVF------EDAVD----IRVPQGQNGNNRGIAYIEFKT 340
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 40/169 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R ++ GNLP ++ + F + G I+ V + S D
Sbjct: 271 REVYCGNLPYSCTEEEIRGLFEECGSIERVSVLS-----------------------DKG 307
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC---PPRKKLKGEDAPLYDIKKTVFVG 342
A+I F+ E+ ++A+ +N G +R++ + P G P +V V
Sbjct: 308 CAFITFEQEEGAKSAIQWNQTEYKGRMLRINMSADKPQPGSLSSGGYGP------SVIVR 361
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
N+PF DE I F CG+ V+ V + R+ +G A V F
Sbjct: 362 NIPFSSDDESIKSFFNGCGV------VKRVSIPRYSDTGKMRGFAMVEF 404
>gi|357612263|gb|EHJ67888.1| spliceosomal protein on the X [Danaus plexippus]
Length = 259
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L +V + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDRVTESLLWELFVQAG----------PVVNVHMPKDRVTQTHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ VF+GNL
Sbjct: 57 GFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +V+R P K A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKVMRDPETGNSKAFAFINFAS 151
>gi|300176697|emb|CBK24362.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 38/177 (21%)
Query: 212 HRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG 271
HR EE T++VG L +V ++ L + F++FG P++ +P K
Sbjct: 7 HRNEEA---------TLYVGGLDERVDEELLWELFLQFG----------PVVSVSMP-KD 46
Query: 272 AILQKQINENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKGEDA 330
+L K + A+I ++SE E A+ + + G IR++++ +D
Sbjct: 47 KVLNKHME------FAFIEYQSEIDAEYASHVCDNITLYGRKIRVNKS--------NKDR 92
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
P D+ +F+ NL DV ++ I F L + E + + R P + KG A+V
Sbjct: 93 PTLDVGADLFISNLAPDVTEDMIKTTFSQFGQL--ACEPI-IARDPETNISKGHAFV 146
>gi|357614441|gb|EHJ69078.1| spliceosomal protein on the X [Danaus plexippus]
Length = 334
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L +V + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDRVTESLLWELFVQAG----------PVVNVHMPKDRVTQTHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ VF+GNL
Sbjct: 57 GFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +V+R P K A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKVMRDPETGNSKAFAFINFAS 151
>gi|350540024|ref|NP_001232117.1| heterogeneous nuclear ribonucleoprotein D-like [Taeniopygia
guttata]
gi|197129483|gb|ACH45981.1| putative heterogeneous nuclear ribonucleoprotein D-like variant 1
[Taeniopygia guttata]
Length = 301
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 28 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 67
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S E L + G I RA K LKG++ P K V
Sbjct: 68 -GRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 117
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 118 FVGGLSPDTSEEQIKEYFGAFGEIEN 143
>gi|391337396|ref|XP_003743055.1| PREDICTED: uncharacterized protein LOC100908642 [Metaseiulus
occidentalis]
Length = 543
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV L + F++ G PI+ +P+ Q +
Sbjct: 14 TIYVGGLDEKVSDNLLWELFVQAG----------PIVSVHMPKDRITGLHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A+V F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFVNFAS 151
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 38/197 (19%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G KRK+ D+ ED K++ +D + + T+ + NL ++ ++ K+G I V
Sbjct: 25 GLKRKREDDNQEDA----KKQKYDYDARAAYTVMLRNLSYNTSDDSIKEKLSKYGSI--V 78
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL 315
R+ ++P D + +G + ++ F ++ + + + G ++L
Sbjct: 79 RV-NIPT-DERGRSRG--------------YGFVEFDEVEAAQKVVDLKAMEMDGREVQL 122
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVI 373
++ R + G VFVGNLP ++++I +LF CG +E VR+
Sbjct: 123 QQS-KARDEFSGRTTQ-------VFVGNLPESAEEQDIRELFETCG------EIEEVRMP 168
Query: 374 RHPHMRVGKGIAYVLFK 390
+ KG A+V F+
Sbjct: 169 KDKDTEKKKGFAFVQFR 185
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDL 363
++ DEEI F ++
Sbjct: 125 TEISDEEIKTFFGQFGNI 142
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ + + F++ G P+++ +P+ NA +
Sbjct: 32 TVYVGNLDPQVTEEIVWEVFVQAG----------PVVNVYMPKDRV-------SNAHQGY 74
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A++ ++ E+ + A+ NM + G IR ++A +K D+ +FVGNL
Sbjct: 75 AFVEYRGEEDADYAIKVLNMIKLFGKPIRANKASVDKKST--------DVGANLFVGNLD 126
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D+ ++ +Y F + + +++R P +G +V + +
Sbjct: 127 PDMDEKLLYDTFSAFGVV---ITTPKIMRDPDTGNSRGFGFVSYDS 169
>gi|134083605|emb|CAL00520.1| unnamed protein product [Aspergillus niger]
Length = 381
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ V ++ L K K+G ++ V V ++D + KG +
Sbjct: 197 TVFIGNVFYDVTREDLKKAMEKYGVVEKV----VLVLDNRGISKG--------------Y 238
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ A NM + G + + A + +AP +T+++GNLP
Sbjct: 239 GYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAP----TRTLYIGNLP 294
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F++ D ++ +LF D+++ V+ +RV +G A+ F
Sbjct: 295 FEMTDRDLNELF---KDVQNVVD-IRVAVDRRTGQARGFAHAEF 334
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDL 363
++ DEEI F ++
Sbjct: 125 TEISDEEIKTFFGQFGNI 142
>gi|147898449|ref|NP_001089615.1| uncharacterized protein LOC734673 [Xenopus laevis]
gi|68534615|gb|AAH99272.1| MGC116464 protein [Xenopus laevis]
Length = 391
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+I++GNL +V ++ L + ++ G P++ +PR +
Sbjct: 12 SIYIGNLDSQVNEEILWECMLQAG----------PVLSVNMPRDKV-------SGFHQGY 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FK+E+ + AL NM + IR ++A +K ++D+ +FVGNL
Sbjct: 55 GFVEFKTEEDADYALKVMNMIKLYNKPIRCNKATTDKK--------IHDVGANLFVGNLA 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ ++ F +L + ++++ P KG A+V F +
Sbjct: 107 PEVDEKMLFDTFSQFGNL---ISTPKIMKDPESGGSKGFAFVSFDS 149
>gi|238859599|ref|NP_001155005.1| RNA-binding protein 34 isoform 2 [Homo sapiens]
gi|119590413|gb|EAW70007.1| RNA binding motif protein 34, isoform CRA_c [Homo sapiens]
Length = 225
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 149 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 208
Query: 250 GEIDSVRIRSV 260
G+I+SVR RS+
Sbjct: 209 GQIESVRFRSL 219
>gi|348523083|ref|XP_003449053.1| PREDICTED: nucleolin-like isoform 3 [Oreochromis niloticus]
Length = 658
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + L N + G ++L++A R K +D+ +T+FV NLPF
Sbjct: 283 GYVDFASEEDLQKGLELNGKKVMGQEVKLEKA---RSKEGSQDSKKEKDARTLFVKNLPF 339
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG-KGIAYVLFKT 391
+++ ++F +AV + P KGIAYV FKT
Sbjct: 340 SATADDLKEIFK---------DAVEIRVPPGQNTSNKGIAYVEFKT 376
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDL 363
++ DEEI F ++
Sbjct: 125 TEISDEEIKTFFGQFGNI 142
>gi|444727649|gb|ELW68129.1| RNA-binding protein 34 [Tupaia chinensis]
Length = 234
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV 260
RT+FVGNLP+ KKTL F ++G+++SVR RSV
Sbjct: 167 RTVFVGNLPVTCNKKTLKSFFKEYGQVESVRFRSV 201
>gi|473943|dbj|BAA07503.1| KIAA0117 [Homo sapiens]
Length = 227
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 151 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 210
Query: 250 GEIDSVRIRSV 260
G+I+SVR RS+
Sbjct: 211 GQIESVRFRSL 221
>gi|426344793|ref|XP_004038938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Gorilla gorilla gorilla]
gi|426344795|ref|XP_004038939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Gorilla gorilla gorilla]
Length = 420
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 34/204 (16%)
Query: 194 GVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEID 253
G E+ KK E+ED V +K++ +G+ TIFVG L V + L EF G +
Sbjct: 139 GSKEESKKRSAESEDDAVAKKQK---TDGQPA-TIFVGRLSWSVDDEWLKTEFDHIGGVV 194
Query: 254 SVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNH 312
R+ I ++ +++ + Y+ F+ E A+ + I G
Sbjct: 195 GARV---------------IYERGTDKSRG--YGYVDFEDVSYAEKAVKEMHGKEIDGRA 237
Query: 313 IRLDR-----ACPPR--KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
I D A PR + K D P T+F+GNL F+ + +++LF
Sbjct: 238 INCDMSTSKPASAPREDRAKKYGDTPS-QPSDTLFLGNLSFNADRDALFELFS----KHG 292
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLF 389
+V +VR+ HP KG YV +
Sbjct: 293 NVISVRIPTHPESNQPKGFGYVQY 316
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 191 KKVGVGE-KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKF 249
KK V E K++KA E E +K + +D + +T+FVG L V + L +EF
Sbjct: 219 KKPAVPEPKKRKA--EEEAPAFSKKAKANEDGSEESKTLFVGQLSWNVDEDWLRREFEDV 276
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNM-AVI 308
+++ R+ + D + R I Y+ F + E ALA A I
Sbjct: 277 ATVENARV----VWDNQRNRSKGI-------------GYVDFATRADAEKALAEKQGAEI 319
Query: 309 GGNHIRLDRACPPR---------KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG 359
G I LD + +K ++P D T+FVGNL F+ DEE L
Sbjct: 320 DGRPINLDFTTARQNNNNSQDRARKFGDSESPPSD---TLFVGNLSFNA-DEEA--LGAA 373
Query: 360 LNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+++ V +VR+ KG AYV F T
Sbjct: 374 MSE-HGEVTSVRIPTDKDTGNKKGFAYVTFST 404
>gi|348523079|ref|XP_003449051.1| PREDICTED: nucleolin-like isoform 1 [Oreochromis niloticus]
Length = 700
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + L N + G ++L++A R K +D+ +T+FV NLPF
Sbjct: 328 GYVDFASEEDLQKGLELNGKKVMGQEVKLEKA---RSKEGSQDSKKEKDARTLFVKNLPF 384
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG-KGIAYVLFKT 391
+++ ++F +AV + P KGIAYV FKT
Sbjct: 385 SATADDLKEIFK---------DAVEIRVPPGQNTSNKGIAYVEFKT 421
>gi|159480766|ref|XP_001698453.1| hypothetical protein CHLREDRAFT_187814 [Chlamydomonas reinhardtii]
gi|158282193|gb|EDP07946.1| predicted protein [Chlamydomonas reinhardtii]
Length = 434
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 8/103 (7%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
A+I FK+++ EAALA N ++ G +R+++ C +LKG A Y + V+VGN+ F
Sbjct: 203 AFITFKTQEGYEAALACNGEMLEGRPLRVEK-CKAAAELKGNVAG-YPV---VYVGNVSF 257
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+V + E+ +LF +E S VR+ + + R KG A+V F
Sbjct: 258 EVGEPELRKLFKERAGVEPS--EVRLHKDKNGRP-KGFAHVHF 297
>gi|348523081|ref|XP_003449052.1| PREDICTED: nucleolin-like isoform 2 [Oreochromis niloticus]
Length = 706
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + L N + G ++L++A R K +D+ +T+FV NLPF
Sbjct: 328 GYVDFASEEDLQKGLELNGKKVMGQEVKLEKA---RSKEGSQDSKKEKDARTLFVKNLPF 384
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG-KGIAYVLFKT 391
+++ ++F +AV + P KGIAYV FKT
Sbjct: 385 SATADDLKEIFK---------DAVEIRVPPGQNTSNKGIAYVEFKT 421
>gi|426344797|ref|XP_004038940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Gorilla gorilla gorilla]
Length = 363
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 31/200 (15%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G ++KAD E + K+ D E + ++VG L V + L EF GE+
Sbjct: 185 GHGKRKADQEAQ---APAKKSRTDGEAEPTANVYVGGLSWNVDNEWLASEFQSCGEVVEA 241
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL 315
R+ + D Q Q ++ ++ FK+ + A+A I G IR
Sbjct: 242 RV----MFDH---------QNQKSKG----FGFVRFKTAEEAAKAVAMTGHEIDGRAIRC 284
Query: 316 DRAC-----PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLES-SVEA 369
D A P ++ + + T+++G L +D+ ++ +Y+ F D++ S+
Sbjct: 285 DFAAEKTDNPVERRAQKFNDQRSAPAATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPT 344
Query: 370 VRVIRHPHMRVGKGIAYVLF 389
R P KG YV F
Sbjct: 345 DRETGAP-----KGFGYVEF 359
>gi|348523085|ref|XP_003449054.1| PREDICTED: nucleolin-like isoform 4 [Oreochromis niloticus]
Length = 659
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + L N + G ++L++A R K +D+ +T+FV NLPF
Sbjct: 287 GYVDFASEEDLQKGLELNGKKVMGQEVKLEKA---RSKEGSQDSKKEKDARTLFVKNLPF 343
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG-KGIAYVLFKT 391
+++ ++F +AV + P KGIAYV FKT
Sbjct: 344 SATADDLKEIFK---------DAVEIRVPPGQNTSNKGIAYVEFKT 380
>gi|154281129|ref|XP_001541377.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411556|gb|EDN06944.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 397
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 27/174 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP VKK + F G + S I + + + KQ + + A
Sbjct: 87 VWVGNLPFVVKKDDIRAFFTSSGTLKSSDITRIHLPEGP---------KQNGKAQNKGFA 137
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHI----------RLDRACPPRKKLKGEDAPLYDIKK 337
Y+ F S ++ E A+A + +I G R D+ K + +
Sbjct: 138 YVDFTSNEAMETAIAMSEQLINGRRALIKNAKSFVGRPDKPNDEATSNKASKLSAHAPSR 197
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
VFVGNL FDV E + + F CG+ +E +++ KG A++ F
Sbjct: 198 RVFVGNLGFDVTKEILEEHFKPCGV------IEHIQLATFQDSGKCKGYAWIEF 245
>gi|325089583|gb|EGC42893.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 422
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 27/174 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP VKK + F G + S I + + + KQ + + A
Sbjct: 87 VWVGNLPFVVKKDDIRAFFTSSGTLKSSDITRIHLPEGP---------KQNGKAQNKGFA 137
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHI----------RLDRACPPRKKLKGEDAPLYDIKK 337
Y+ F S ++ E A+A + +I G R D+ K + +
Sbjct: 138 YVDFTSNEAMETAIAMSEQLINGRRALIKNAKSFVGRPDKPNDEATTNKASKLSAHAPSR 197
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
VFVGNL FDV E + + F CG+ +E +++ KG A++ F
Sbjct: 198 RVFVGNLGFDVTKEILEEHFKPCGV------IEHIQLATFQDSGKCKGYAWIEF 245
>gi|58332392|ref|NP_001011015.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|82234092|sp|Q640A2.1|HNRDL_XENTR RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|52139122|gb|AAH82729.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|89268223|emb|CAJ82429.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
DEGK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 24 DEGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 63
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 64 -GRSRGFGFVLFKDAVSVDKVLETKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 113
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L + +E+I Q F G ++E+
Sbjct: 114 FVGGLSPETTEEQIKQYFGGFGEIEN 139
>gi|395542045|ref|XP_003772945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Sarcophilus harrisii]
Length = 475
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 201 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 240
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 241 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 290
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 291 FVGGLSPDTSEEQIKEYFGAFGEIE 315
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGDFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|395834189|ref|XP_003790094.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Otolemur garnettii]
Length = 363
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDATSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGDFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|225690511|ref|NP_001070120.2| nucleolin [Danio rerio]
Length = 705
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + AL N + G ++LD+A R K ++ +T+FV NLP+
Sbjct: 330 GYVDFASEEELQKALELNGKKLLGQPVKLDKA---RSKENSQENKKERDARTLFVKNLPY 386
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ +++ ++F + +V+ IR P G +GIAY+ FKT
Sbjct: 387 SITQDDLREIF------DQAVD----IRVPMGNTGTSRGIAYIEFKT 423
>gi|190339446|gb|AAI62643.1| Zgc:152810 protein [Danio rerio]
Length = 708
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + AL N + G ++LD+A R K ++ +T+FV NLP+
Sbjct: 333 GYVDFASEEELQKALELNGKKLLGQPVKLDKA---RSKENSQENKKERDARTLFVKNLPY 389
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ +++ ++F + +V+ IR P G +GIAY+ FKT
Sbjct: 390 SITQDDLREIF------DQAVD----IRVPMGNTGTSRGIAYIEFKT 426
>gi|115313778|gb|AAI24136.1| Zgc:152810 [Danio rerio]
Length = 704
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + AL N + G ++LD+A R K ++ +T+FV NLP+
Sbjct: 329 GYVDFASEEELQKALELNGKKLLGQPVKLDKA---RSKENSQENKKERDARTLFVKNLPY 385
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ +++ ++F + +V+ IR P G +GIAY+ FKT
Sbjct: 386 SITQDDLREIF------DQAVD----IRVPMGNTGTSRGIAYIEFKT 422
>gi|39644771|gb|AAH07392.2| HNRPDL protein, partial [Homo sapiens]
Length = 415
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 141 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 180
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 181 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 230
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 231 FVGGLSPDTSEEQIKEYFGAFGEIE 255
>gi|384249045|gb|EIE22527.1| hypothetical protein COCSUDRAFT_66269 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTI+VGN+ +V + L+ F G + +RI P DT+
Sbjct: 6 RTIYVGNVGKEVDENALMALFGHCGTVTQIRIAGDPSYDTR------------------- 46
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY-------DIKKT 338
+A+I F + + ++ A+ + ++ IR++ A +G P +++T
Sbjct: 47 YAFIEFTTPEESQTAMMLDGMMVFERQIRVNMA-------RGGSGPGVVRSNDPDRVQRT 99
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ +G LPFD EE ++D S++ V +R + G+ A+V F T
Sbjct: 100 IHIGGLPFDELSEE------SISDYFSNIGEVNAVR----KSGR-FAWVEFNT 141
>gi|67536962|ref|XP_662255.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
gi|40741263|gb|EAA60453.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
Length = 1639
Score = 46.2 bits (108), Expect = 0.028, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 31/169 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + + F K+GE IID + P + N
Sbjct: 905 TLFVTNFPPTADENYIRDLFSKYGE----------IIDIRFP--------SLKYNTHRRF 946
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ + +ALA + + +G G H+ + + P RK + + P+Y+ + + V N+
Sbjct: 947 CYLQFKTSVAAHSALALDGSAVGNGLHLVVKISDPSRK--QDRNGPIYE-GREIHVSNVN 1003
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTR 392
+ ++++ +LF S V ++R P G KG YV+F ++
Sbjct: 1004 WSASEDDLKELF-------SRFGTVELVRLPRKVDGGSKGFGYVVFSSK 1045
>gi|74001737|ref|XP_858404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform
12 [Canis lupus familiaris]
Length = 420
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|350633123|gb|EHA21489.1| hypothetical protein ASPNIDRAFT_125918 [Aspergillus niger ATCC
1015]
Length = 264
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ V ++ L K K+G ++ V V ++D + KG +
Sbjct: 94 TVFIGNVFYDVTREDLKKAMEKYGVVEKV----VLVLDNRGISKG--------------Y 135
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ A NM + G + + A + +AP +T+++GNLP
Sbjct: 136 GYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAP----TRTLYIGNLP 191
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F++ D ++ +LF D+++ V+ +RV +G A+ F
Sbjct: 192 FEMTDRDLNELF---KDVQNVVD-IRVAVDRRTGQARGFAHAEF 231
>gi|386781544|ref|NP_001247638.1| heterogeneous nuclear ribonucleoprotein D-like [Macaca mulatta]
gi|380787105|gb|AFE65428.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|380787107|gb|AFE65429.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|383410015|gb|AFH28221.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
Length = 420
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L EF G + S R+ I ++ + + +
Sbjct: 188 TIFVGRLSWSIDDEWLKNEFDHIGGVVSARV---------------IYERGTDRSRG--Y 230
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD-----RACPPR--KKLKGEDAPLYDIKKT 338
Y+ F+ + E A+ + I G I D A PR + K D P + +T
Sbjct: 231 GYVDFEDKSYAEKAVKEMHGKEIDGRPINCDLSTSKPAGNPRDDRAKKFGDLPS-EPSET 289
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+F+GNL F+ + IY++F ++ S VR+ HP KG YV +
Sbjct: 290 LFLGNLSFNADRDNIYEMFSKFGEIVS----VRIPTHPETEQPKGFGYVQY 336
>gi|464252|sp|P20397.3|NUCL_XENLA RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|64937|emb|CAA44805.1| nucleolin [Xenopus laevis]
Length = 651
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ E AL I G +++++A K E+ D +T+FV N+P+
Sbjct: 276 GYVDFSSEEEVEKALKLTGKKILGTEVKIEKAMAFDKNKTAENKKERD-SRTLFVKNIPY 334
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLF 389
EE+ ++F E + IR P + G KGIAYV F
Sbjct: 335 STTVEELQEIF----------ENAKDIRIPTGKDGSNKGIAYVEF 369
>gi|410957341|ref|XP_003985287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Felis catus]
gi|410957343|ref|XP_003985288.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Felis catus]
Length = 420
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|357480265|ref|XP_003610418.1| RNA-binding protein [Medicago truncatula]
gi|355511473|gb|AES92615.1| RNA-binding protein [Medicago truncatula]
Length = 319
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 24/136 (17%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++T+++G+L + + L F GE+ SV++ I KQ N++
Sbjct: 73 VKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKV---------------IRNKQTNQSEG- 116
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVI--GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
+ ++ F S E L FN ++ GG + RL+ A + + +D+P Y T+FV
Sbjct: 117 -YGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDY----TIFV 171
Query: 342 GNLPFDVKDEEIYQLF 357
G+L DV D + ++F
Sbjct: 172 GDLAADVSDHHLTEVF 187
>gi|297673870|ref|XP_002814970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pongo abelii]
gi|332233343|ref|XP_003265861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Nomascus leucogenys]
gi|395735091|ref|XP_003776522.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pongo abelii]
Length = 420
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|417410446|gb|JAA51696.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 404
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 130 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 169
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 170 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 219
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 220 FVGGLSPDTSEEQIKEYFGAFGEIE 244
>gi|395834185|ref|XP_003790092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Otolemur garnettii]
gi|395834187|ref|XP_003790093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Otolemur garnettii]
Length = 418
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|344284837|ref|XP_003414171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Loxodonta africana]
Length = 420
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|395735093|ref|XP_003776523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pongo abelii]
gi|441625206|ref|XP_004089054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Nomascus
leucogenys]
Length = 363
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|344284839|ref|XP_003414172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Loxodonta africana]
Length = 363
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|410957345|ref|XP_003985289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Felis catus]
Length = 363
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|14110407|ref|NP_112740.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Homo
sapiens]
gi|114593989|ref|XP_001142372.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4
[Pan troglodytes]
gi|332819433|ref|XP_003310370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Pan
troglodytes]
gi|397524661|ref|XP_003832307.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan paniscus]
gi|397524663|ref|XP_003832308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pan paniscus]
gi|74762096|sp|O14979.3|HNRDL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=AU-rich element RNA-binding factor; AltName:
Full=JKT41-binding protein; AltName: Full=Protein laAUF1
gi|4512254|dbj|BAA75239.1| JKTBP2 [Homo sapiens]
gi|4512257|dbj|BAA75241.1| JKTBP2 [Homo sapiens]
gi|15079822|gb|AAH11714.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|47115183|emb|CAG28551.1| HNRPDL [Homo sapiens]
gi|47938369|gb|AAH71944.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|63990763|gb|AAY40914.1| unknown [Homo sapiens]
gi|119626290|gb|EAX05885.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626291|gb|EAX05886.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626292|gb|EAX05887.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626293|gb|EAX05888.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626294|gb|EAX05889.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626296|gb|EAX05891.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|123987254|gb|ABM83797.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|123999068|gb|ABM87118.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|410248290|gb|JAA12112.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296200|gb|JAA26700.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339827|gb|JAA38860.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339829|gb|JAA38861.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339831|gb|JAA38862.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 420
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|148664250|ref|NP_057899.2| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
Length = 420
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|332801090|ref|NP_001193929.1| heterogeneous nuclear ribonucleoprotein D-like isoform b [Homo
sapiens]
gi|114593993|ref|XP_001142118.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan troglodytes]
gi|397524665|ref|XP_003832309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pan paniscus]
gi|119626295|gb|EAX05890.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Homo
sapiens]
gi|410248288|gb|JAA12111.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296198|gb|JAA26699.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 363
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|74001731|ref|XP_858286.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 9
[Canis lupus familiaris]
Length = 363
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|296196170|ref|XP_002745712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Callithrix jacchus]
gi|390460703|ref|XP_003732527.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Callithrix jacchus]
Length = 420
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 68/174 (39%), Gaps = 32/174 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F GNL + TL + F F + R+ + D R
Sbjct: 268 TLFAGNLSWNIDDNTLSEAFKGFEGLVGARV----VTDRDGGRSRGF------------- 310
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRA------CPPRKKL----KGEDAPLYDI 335
Y+ F++ E +T+A A + + + LD A PR + K +
Sbjct: 311 GYVDFETAEAATKAYEAMQGSELDSRPLNLDYANSRPADSNPRDRATDRAKKHGDSVSPE 370
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+T+F+GNLPFD E + Q F + + V +VR+ P KG YV F
Sbjct: 371 SETLFIGNLPFDTDQETVRQFFAEV----AEVASVRLPTDPDSGNLKGFGYVTF 420
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 32/176 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F G+L V L + F F + R+ + D R
Sbjct: 182 TLFAGSLSWGVDDNALYEAFKSFSGLVHARV----VTDKNTGRSRGF------------- 224
Query: 287 AYIVFK-SEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP----------LYDI 335
Y+ F SE +T+A A + G + LD A + K +D L
Sbjct: 225 GYVDFADSESATKAYEAMQGQEVDGRALNLDYANAKPAESKPQDRAADRASRHGDTLSAE 284
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+T+FVGNLPFD + + + + F + + V ++R+ P KG YV F +
Sbjct: 285 SETLFVGNLPFDTEQDAVREFFGEV----AEVASIRLPTDPESGNLKGFGYVTFNS 336
>gi|398407635|ref|XP_003855283.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
gi|339475167|gb|EGP90259.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
Length = 603
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 23/140 (16%)
Query: 162 KKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGV-GEKRKKADNETEDMLVHRKEEGFDD 220
+K + K D + + ++E++ + +++ K+ V GE K+ TED +
Sbjct: 49 EKVESSKNDPISESWLERR-DRLTRDKAAKQAWVTGEGVKELYKPTEDENI--------- 98
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
G RTIF+G LP K L EF +FG I+ VRI + D +K +
Sbjct: 99 RGDAFRTIFIGRLPYTCTTKDLEHEFGRFGPIERVRI----VTDRS--------EKPSKK 146
Query: 281 NADSVHAYIVFKSEQSTEAA 300
+A+++F+SE+ +AA
Sbjct: 147 GTSRGYAFVLFESERDMKAA 166
>gi|402869385|ref|XP_003898743.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Papio anubis]
gi|402869387|ref|XP_003898744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Papio anubis]
Length = 420
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|126330931|ref|XP_001362287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Monodelphis
domestica]
Length = 417
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 143 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 182
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 183 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 232
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 233 FVGGLSPDTSEEQIKEYFGAFGEIE 257
>gi|144226849|ref|NP_001077194.1| heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
gi|134024605|gb|AAI34449.1| HNRPDL protein [Bos taurus]
Length = 420
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 186 KEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKE 245
K+ + ++V E KK+ E E+ ++EG T+FVG L + L KE
Sbjct: 223 KKRKNEEVVADETSKKSKTEAEETAAPTSPAVAEEEGA---TLFVGRLSWNIDDDWLKKE 279
Query: 246 FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FN 304
F G++ R+ I+++ ++ + Y+ FK++ + E ALA
Sbjct: 280 FEHLGDVIGARV---------------IMERATGKSRG--YGYVDFKTKAAAEKALAEMQ 322
Query: 305 MAVIGGNHIRLDRAC--PPRKKLKGED---------APLYDIKKTVFVGNLPFDVKDEEI 353
I G I LD + P K D +P D T+F+GNL F+ + +
Sbjct: 323 GKEIDGRPINLDMSTGKPHASKANAGDRARQFGDSQSPPSD---TLFIGNLSFNANRDSL 379
Query: 354 YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+++F +V + RV HP + KG YV F +
Sbjct: 380 FEIFGEYG----TVISCRVPTHPDTQQPKGFGYVQFSS 413
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + +L + F ++G + S R+ + P DT+ P+
Sbjct: 364 TLFIGNLSFNANRDSLFEIFGEYGTVISCRVPTHP--DTQQPKG---------------F 406
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S +AAL A N I RLD + P
Sbjct: 407 GYVQFSSVDEAKAALEALNGEYIENRPCRLDFSTP 441
>gi|112983328|ref|NP_001037646.1| spliceosomal protein on the X [Bombyx mori]
gi|109706833|gb|ABG43003.1| spliceosomal protein on the X [Bombyx mori]
Length = 342
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L +V + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDRVTESLLWELFVQSG----------PVVNVHMPKDRVTQTHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ VF+GNL
Sbjct: 57 GFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +V+R P K A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKVMRDPETGNSKAFAFINFAS 151
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + L F + G + +I I E +
Sbjct: 8 KTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + QS ALA N + ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQSASTALAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R P KG A+V F
Sbjct: 104 SPEIETETLREAFAPFGEISN----CRIVRDPQTLKSKGYAFVSF 144
>gi|154308771|ref|XP_001553721.1| hypothetical protein BC1G_07808 [Botryotinia fuckeliana B05.10]
gi|347831781|emb|CCD47478.1| hypothetical protein [Botryotinia fuckeliana]
Length = 381
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 24/131 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNL + ++ L KEF FG I VR+ D + KG A
Sbjct: 167 VYIGNLLFDINEEDLKKEFEHFGTITDVRVTR----DARGLSKG--------------FA 208
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
YI F QS AA+ A N + G + ++ K++ ++ P K +F+GNL F
Sbjct: 209 YIDFADVQSATAAIEAKNQTIFEGRRLVVN-YINQTPKIRDQNPP----SKCLFIGNLAF 263
Query: 347 DVKDEEIYQLF 357
++ D ++ LF
Sbjct: 264 EMSDADLNSLF 274
>gi|296486392|tpg|DAA28505.1| TPA: heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
Length = 420
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 208
>gi|351695029|gb|EHA97947.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Heterocephalus glaber]
Length = 340
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 66 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 105
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 106 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 155
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 156 FVGGLSPDTSEEQIKEYFGAFGEIE 180
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 208
>gi|355687288|gb|EHH25872.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Macaca mulatta]
Length = 309
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 35 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 74
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 75 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 124
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 125 FVGGLSPDTSEEQIKEYFGAFGEIEN 150
>gi|355694953|gb|AER99843.1| heteroproteinous nuclear ribonucleoprotein D-like protein [Mustela
putorius furo]
Length = 294
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 91 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 130
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 131 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 180
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 181 FVGGLSPDTSEEQIKEYFGAFGEIE 205
>gi|18026763|gb|AAL55607.1|AF196776_1 phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana]
Length = 597
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 102/259 (39%), Gaps = 70/259 (27%)
Query: 169 RDDVEKDYVEKKYGVIA-----------------------KEEEG---KKVGVGEKRKKA 202
D VE D +E G K EEG +KV V E
Sbjct: 91 DDAVEVDELEGDEGTKEEQKPQKKKNKKKKKKRKVNKTPKKAEEGNVQEKVKVEEIEVNT 150
Query: 203 DNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI 262
DN+ ED +V K ++VG +P + + + F G I V
Sbjct: 151 DNKEEDGVVPNK-------------LYVGGIPYQSTEDEIRSYFRSCGVIIKV------- 190
Query: 263 IDTKI-PRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR---- 317
D K+ P GA S A+I F +E + ALAF+ A +G ++ + +
Sbjct: 191 -DCKMRPEDGAF----------SGIAFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKT 239
Query: 318 ACP--PRKKLKGEDAP-LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIR 374
P PR+K AP + D V++GNL +D + +I +LF + + +VR+ +
Sbjct: 240 TTPSIPRRKTSSGFAPEMVDGYNRVYIGNLAWDTTERDIRKLF-----SDCVINSVRLGK 294
Query: 375 HPHMRVGKGIAYVLFKTRV 393
+ KG A+V FK V
Sbjct: 295 NKETGEFKGYAHVDFKDSV 313
>gi|410921712|ref|XP_003974327.1| PREDICTED: nucleolin-like isoform 1 [Takifugu rubripes]
Length = 680
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + A+ N + G ++LD P K+ ED D + T+FV NLP+
Sbjct: 302 GYVDFSSEEDMQKAMELNGKKVMGMELKLD--MPRSKETTQEDKKERDTR-TLFVKNLPY 358
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTRV 393
+++ ++F E +V+ IR P + G +GIAY+ FK+
Sbjct: 359 SATADDLKEVF------EDAVD----IRVPQGQNGSNRGIAYIEFKSEA 397
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 65 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 103
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 104 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 152
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 153 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 201
>gi|451849890|gb|EMD63193.1| hypothetical protein COCSADRAFT_38066 [Cochliobolus sativus ND90Pr]
Length = 326
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNL +V L + F +FG+I+S++I + D + +G A
Sbjct: 138 LYIGNLYYEVTPDQLKRVFSRFGDIESIKI----VYDNRGLSRG--------------FA 179
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKG------EDAPLYDIKKTVF 340
Y+ +K+ +AA+ +M V G ++ + P + KG E P KT+F
Sbjct: 180 YVEYKNVSDAQAAIDNLDMQVFEGRNLVVQFHAPKYQPAKGRGPNGNEPNP---PSKTLF 236
Query: 341 VGNLPFDVKDEEIYQLFCGL-NDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+GN+ F++ D+++ LF + N L+ V R P +G A+ F
Sbjct: 237 IGNMSFEMSDKDLNDLFRDIRNVLDVRVAIDRRTGQP-----RGFAHADF 281
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 38/176 (21%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + + L +EF G + S R+ I ++ ++ +
Sbjct: 236 TLFVGRLSWSIDDEWLKREFEPLGGVISARV---------------IFERATGKSRG--Y 278
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGED----------APLY 333
Y+ F S+ + E AL + I G I LD + P + D AP
Sbjct: 279 GYVDFDSKSAAEKALKEYQGREIDGRPINLDMSTGKPHASNNRSNDRASKFGDTPSAP-- 336
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
T+F+GNL F+ + + ++F S+ +VR+ HP KG YV +
Sbjct: 337 --SDTLFLGNLSFNANRDNLSEVFSEYG----SIVSVRIPTHPDTEQPKGFGYVQY 386
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + L + F ++G I SVRI + P DT+ P+
Sbjct: 339 TLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHP--DTEQPKG---------------F 381
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ + S +AAL A N I G +RLD + P
Sbjct: 382 GYVQYGSVDEAKAALEALNGEYIEGRPVRLDFSAP 416
>gi|345566791|gb|EGX49733.1| hypothetical protein AOL_s00078g222 [Arthrobotrys oligospora ATCC
24927]
Length = 303
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 26/140 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VGN+ ++ + L +EF +FG++ S ++ + D + KG
Sbjct: 114 IYVGNISYGIRGEDLEREFGEFGKVVSAKV----VYDPRGLSKG--------------FG 155
Query: 288 YIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKK--LKGE-DAPLYDIKKTVFVGN 343
Y+ ++ + + AA+ + ++ G I + P ++ GE +AP +T+F+GN
Sbjct: 156 YVEYEEQDAATAAVQKMHGLIVDGRRINVQYVLRPDREGPTNGESNAP----SRTLFIGN 211
Query: 344 LPFDVKDEEIYQLFCGLNDL 363
L FD+ D+++ +LF G+ +
Sbjct: 212 LSFDITDKDLNELFAGVRNC 231
>gi|449276581|gb|EMC85043.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Columba livia]
Length = 271
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+G L KK L + +FGE+ I++ P+
Sbjct: 2 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT-----------------GRSRGFG 44
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+++FK S E L + G I RA K LKG++ P K VFVG L D
Sbjct: 45 FVLFKDAASVEKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKVFVGGLSPD 95
Query: 348 VKDEEIYQLFCGLNDLES 365
+E+I + F ++E+
Sbjct: 96 TSEEQIKEYFGAFGEIEN 113
>gi|397629333|gb|EJK69314.1| hypothetical protein THAOC_09441 [Thalassiosira oceanica]
Length = 407
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 34/186 (18%)
Query: 219 DDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQ 275
DD KL T+FV LP + + F + G D ++IR DT R
Sbjct: 179 DDVAKLQSVDHTVFVEGLPFSASEDDVRSFFAQNGCDDILQIRLPRWQDTGRLRG----- 233
Query: 276 KQINENADSVHAYIVFKSEQSTEAALA--FNMAVIGGNHIRLDRACPPRK------KLKG 327
++VF S ++ AL+ N +G ++ + A PR L G
Sbjct: 234 ----------FGHVVFASTETRSRALSDEVNGKNLGSRYVTVKEANAPRAGTTAGASLGG 283
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVE-AVRVIRHPHMRVGKGI 384
+ KTV++ NLPFD +++I ++F CG VE +R+ R+ KG
Sbjct: 284 KARQQPKGCKTVYIRNLPFDATEDQILEVFRTCG-----KVVEGGIRIARNHVTGQSKGF 338
Query: 385 AYVLFK 390
Y FK
Sbjct: 339 CYCEFK 344
>gi|125572147|gb|EAZ13662.1| hypothetical protein OsJ_03579 [Oryza sativa Japonica Group]
Length = 312
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 28/124 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIID--TKIPRKGAILQKQINENAD 283
R IFVG LP+ +K L + F KFGE++ R++ +ID TK+PR
Sbjct: 124 RKIFVGGLPVSATEKKLKEYFNKFGEVN----RAIVVIDLNTKMPRG------------- 166
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-------KLKGEDAPLYDIK 336
+I F SE+ST AL + + G + + A P ++ KL + P Y
Sbjct: 167 --FGFIQFASEESTARALKKDKHFLCGQWVEVSLAMPKQQNAASGTSKLSVQARPFYPTT 224
Query: 337 KTVF 340
+ F
Sbjct: 225 SSNF 228
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 30/170 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L KEF G + R+ I ++ + + +
Sbjct: 172 TIFVGRLSWSIDDEWLKKEFEHIGGVVGARV---------------IYERGTDRSRG--Y 214
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAP--LYDI----KKTV 339
Y+ F+ + E A+ I G I +D + K G D D+ T+
Sbjct: 215 GYVDFEDKSYAEKAIQEMQGKEIDGRPINVDMST--SKPAGGNDRAKKFGDVPSEPSDTL 272
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+GNL F+ + IY+ F ++ S VR+ HP KG YV F
Sbjct: 273 FLGNLSFNADKDNIYETFSKYGEIIS----VRIPTHPETEQPKGFGYVQF 318
>gi|326918700|ref|XP_003205626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Meleagris gallopavo]
Length = 264
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+G L KK L + +FGE+ I++ P+
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT-----------------GRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+++FK S E L + G I RA K LKG++ P K VFVG L D
Sbjct: 44 FVLFKDAASVEKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKVFVGGLSPD 94
Query: 348 VKDEEIYQLFCGLNDLES 365
+E+I + F ++E+
Sbjct: 95 TSEEQIKEYFGAFGEIEN 112
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 35/139 (25%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DDE R +FVG L + +K L + F ++GEI+S+ +++ P
Sbjct: 65 DDE----RKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDP----------------- 103
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
N A+IV+K+ S + +A G H+ ++ P K+ K
Sbjct: 104 NTGRSRGFAFIVYKASDSIDKVVA------AGEHVLNNKKVDP-KRAKARPG-------K 149
Query: 339 VFVGNLPFDVKDEEIYQLF 357
+FVG L D+ DEEI F
Sbjct: 150 IFVGGLTSDISDEEIKTFF 168
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 40/169 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R ++ GNLP ++ + F + G I+ V + S D
Sbjct: 507 REVYCGNLPYSCTEEEIRGLFEECGSIERVSVLS-----------------------DKG 543
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC---PPRKKLKGEDAPLYDIKKTVFVG 342
A+I F+ E+ ++A+ +N G +R++ + P G P +V V
Sbjct: 544 CAFITFEQEEGAKSAIQWNQTEYKGRMLRINMSADKPQPGSLSSGGYGP------SVIVR 597
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
N+PF DE + F CG+ V+ V + R+ +G A V F
Sbjct: 598 NIPFSSDDESVKSFFNGCGV------VKRVSIPRYSDTGKMRGFAMVEF 640
>gi|395536629|ref|XP_003770315.1| PREDICTED: nucleolin [Sarcophilus harrisii]
Length = 668
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 21/107 (19%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E A+ + + + G+ I+L++A ++ K DA +T+FV NLP+
Sbjct: 407 GYVEFESAEDMEKAMELSGSKVLGSEIKLEKA---KENKKDRDA------RTLFVKNLPY 457
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
V EE+ ++F E ++E IR + G KGIAYV FKT
Sbjct: 458 KVTQEELKEVF------EDAIE----IRLVCTKDGTPKGIAYVEFKT 494
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 208
>gi|157110306|ref|XP_001651044.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878768|gb|EAT42993.1| AAEL005515-PB [Aedes aegypti]
Length = 292
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 124
Query: 346 FDVKDEEIYQLF 357
++ DEEI F
Sbjct: 125 TEISDEEIKTFF 136
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 208
>gi|317036295|ref|XP_001398046.2| C6 transcription factor [Aspergillus niger CBS 513.88]
Length = 1095
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ V ++ L K K+G ++ V V ++D + KG +
Sbjct: 911 TVFIGNVFYDVTREDLKKAMEKYGVVEKV----VLVLDNRGISKG--------------Y 952
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ A NM + G + + A + +AP +T+++GNLP
Sbjct: 953 GYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAP----TRTLYIGNLP 1008
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F++ D ++ +LF D+++ V+ +RV +G A+ F
Sbjct: 1009 FEMTDRDLNELF---KDVQNVVD-IRVAVDRRTGQARGFAHAEF 1048
>gi|241708466|ref|XP_002403282.1| spliceosome associated protein, putative [Ixodes scapularis]
gi|215505045|gb|EEC14539.1| spliceosome associated protein, putative [Ixodes scapularis]
Length = 408
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDEKVSDTILWELFVQAG----------PVVNVHMPKDRVTGHHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFAS 151
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + FI+ G P+++ +P+ Q +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVG----------PVVNCHMPKDRVTQTHQ-------GY 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE + A+ NM + G +R+++A +K L D+ +F+GNL
Sbjct: 55 GFVEFLSEDDADYAIKILNMIKLFGKPVRVNKASSHQKNL--------DVGANLFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ + +
Sbjct: 107 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINYSS 149
>gi|189204223|ref|XP_001938447.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985546|gb|EDU51034.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 319
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 26/168 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+ +++GNL +V L + F +FGE++SV+I + D + +G
Sbjct: 129 KMLYIGNLYYEVTADQLKRVFSRFGEVESVKI----VYDNRGLSRG-------------- 170
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI---KKTVFV 341
Y+ F + +AA+ +M V G ++ + P + + +D KT+F+
Sbjct: 171 FGYVEFANMADAQAAIDNLDMQVFEGRNMVVQYHQPKPNSMSRNASGSFDANAPSKTLFI 230
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
GN+ F++ D+++ LF + + V VRV +G A+ F
Sbjct: 231 GNMSFEMSDKDLNDLFRDIRN----VMDVRVAIDRRTGQPRGFAHADF 274
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|432854496|ref|XP_004067929.1| PREDICTED: nucleolin-like isoform 2 [Oryzias latipes]
Length = 651
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F SE+ A+ N G ++LD+A R+K ++ +T+FV NLP
Sbjct: 278 FGYVDFASEEDMNKAMELNGKKFMGQELKLDKA---RQKDNSQEGKKERDARTLFVKNLP 334
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
F +++ +LF E +V+ +R P + G +GIAY+ FK+
Sbjct: 335 FSATVDDLKELF------EDAVD----VRLPQGQNGSNRGIAYIEFKS 372
>gi|15010818|dbj|BAB62188.1| JKTBP1delta6 [Homo sapiens]
Length = 244
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 27 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 66
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 67 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEIEN 142
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++V +P + + L+ F G + VR+ D+ PR +
Sbjct: 69 TVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQ--DSGKPRG---------------Y 111
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-----KLKGEDAPLYDIK--KTV 339
A++VF E + + AL + + ++ + RA PR K K ++ +K +TV
Sbjct: 112 AHVVFDDEAALKKALKLDGQYLFNRYLSIRRAEAPRAVEMALKEKNQNTTKKAVKGCRTV 171
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+ LP++V++ I + CG ++ +VR+ H + KG YV F
Sbjct: 172 FIKQLPYEVEEGTIREALASCG------TITSVRLPIWNHTKKLKGFGYVEF 217
>gi|195340414|ref|XP_002036808.1| GM12470 [Drosophila sechellia]
gi|194130924|gb|EDW52967.1| GM12470 [Drosophila sechellia]
Length = 299
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + + NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P K A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFAS 151
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + FI+ G P+++ +P+ Q +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVG----------PVVNCHMPKDRVTQTHQ-------GY 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE + A+ NM + G +R+++A +K L D+ +F+GNL
Sbjct: 55 GFVEFLSEDDADYAIKILNMIKLFGKPVRVNKASSHQKNL--------DVGANLFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P KG A++ + +
Sbjct: 107 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINYSS 149
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 38/180 (21%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS-- 284
T+FVG L V L K+F +D +P G + I EN
Sbjct: 109 TMFVGRLSWNVDDDGL-KQFF---------------VDENVP--GVXSARVITENGSGRS 150
Query: 285 -VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACP-PR----------KKLKGEDAP 331
Y+ F S EAA+ ++ A I G + LD A PR + K D P
Sbjct: 151 KGFGYVDFDSVAHAEAAVKKYDGAEIDGRAVHLDMAASKPRSSSPNDRANNRAKKYGDTP 210
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ T+FVGNL F+ +++ F S+E +R+ P +G AYV F +
Sbjct: 211 S-EPSDTLFVGNLSFEATMDDVRGAFESF----GSIEXIRIPTRPGTEDPRGFAYVQFSS 265
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL + + F FG I+ +RI + P T+ PR
Sbjct: 216 TLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRP--GTEDPRG---------------F 258
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-PR 322
AY+ F S + +AAL N I G +RLD + P PR
Sbjct: 259 AYVQFSSVEEAKAALDGMNGEYINGRSVRLDYSTPRPR 296
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 40/169 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R ++ GNLP ++ + F + G I+ V + S D
Sbjct: 543 REVYCGNLPYSCTEEEIRGLFEECGSIERVSVLS-----------------------DKG 579
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC---PPRKKLKGEDAPLYDIKKTVFVG 342
A+I F+ E+ ++A+ +N G +R++ + P G P +V V
Sbjct: 580 CAFITFEQEEGAKSAIQWNQTEYKGRMLRINMSADKPQPGSLSSGGYGP------SVIVR 633
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
N+PF DE + F CG+ V+ V + R+ +G A V F
Sbjct: 634 NIPFSSDDESVKSFFNGCGV------VKRVSIPRYSDTGKMRGFAMVEF 676
>gi|340373805|ref|XP_003385430.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Amphimedon
queenslandica]
Length = 529
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFI-KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
R +++GN+P + ++ ++ F K E +P++ +I N D
Sbjct: 204 RRLYIGNIPFGIAEEVMVNFFNEKMLEAKLCSAPGIPVLAVQI-------------NMDK 250
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKKLKGEDAP------LYD 334
A+I F+S + T A+AF+ V+ G +++ D A P + + P + D
Sbjct: 251 NFAFIEFRSVEETTNAMAFDGIVLQGQSLKIRRPKDYAPIPGVDIMPKHVPGVISTVVPD 310
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
VF G LP + D+++ +L DL++
Sbjct: 311 GPHKVFCGGLPTYLSDDQVKELLSSFGDLKA 341
>gi|149046813|gb|EDL99587.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b
[Rattus norvegicus]
Length = 300
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 27 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 66
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 67 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEIEN 142
>gi|242011768|ref|XP_002426618.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
gi|212510771|gb|EEB13880.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
Length = 691
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTEPLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ ++ F + ++ +++R P KG A++ F +
Sbjct: 109 PEVDEKLLFDTFSAFGVI---LQTPKIMRDPDSGNSKGFAFINFAS 151
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 40/181 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++F+GNLP + K+ L + F G+I+ V S+P KG
Sbjct: 512 KSVFIGNLPFSMTKEWLEQIFSWCGDIERV---SIPTDWESGKIKG-------------- 554
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-----------LYD 334
A++ F E S E A+ N G +R++ + P G L +
Sbjct: 555 FAFLDFADEDSAEKAVGKNGEDCEGRDLRINYSFPKNDNAHGGKGKGGKGKGKGHHELGE 614
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFK 390
+VFVGNLP+ + + +Y++F CG R G +G AY+ F
Sbjct: 615 KSASVFVGNLPWSMTQDWLYEVFGDCG--------SITRCFMPTDRETGNPRGFAYIDFD 666
Query: 391 T 391
T
Sbjct: 667 T 667
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 208
>gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens]
Length = 298
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 24 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 63
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 64 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 113
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 114 FVGGLSPDTSEEQIKEYFGAFGEIEN 139
>gi|440898654|gb|ELR50102.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Bos grunniens mutus]
Length = 356
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 82 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 121
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 122 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 171
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 172 FVGGLSPDTSEEQIKEYFGAFGEIEN 197
>gi|349604934|gb|AEQ00343.1| Heteroproteinous nuclear ribonucleoprotein D-like-like protein,
partial [Equus caballus]
Length = 297
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 23 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 62
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 63 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 112
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 113 FVGGLSPDTSEEQIKEYFGAFGEIEN 138
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TI V NL V L EF + GEI SVR++ L +Q +
Sbjct: 288 KTIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQ---------------LDRQSGRSRG-- 330
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRA-CPPR----KKLKGEDAPLYDIKKTV 339
+I F + + AL + G I +D+ PR + K D P + +T+
Sbjct: 331 FGFIDFSTSDAVAKALETMQGKEVDGRAIAVDKTESNPRNTQARAAKFGDTP-SEPSQTI 389
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYVLF 389
FVGN+ F ++ ++Q F AVR +R P R G KG AYV F
Sbjct: 390 FVGNVAFSADEDALWQTFADYG-------AVRSVRLPTDRETGQPKGFAYVEF 435
>gi|81917948|sp|Q9Z130.1|HNRDL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=JKT41-binding protein
gi|4514631|dbj|BAA75479.1| JKTBP [Mus musculus]
gi|18203892|gb|AAH21374.1| Heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
gi|74196730|dbj|BAE43104.1| unnamed protein product [Mus musculus]
gi|148688362|gb|EDL20309.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Mus
musculus]
Length = 301
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 27 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 66
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 67 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEIEN 142
>gi|378755700|gb|EHY65726.1| hypothetical protein NERG_01333 [Nematocida sp. 1 ERTm2]
Length = 316
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 30/172 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIF+ L + L + F +FGEI VRI P KG
Sbjct: 91 RTIFIKGLNFSATEDELKELFGQFGEIVEVRI---PRSRDGPGGKG-------------- 133
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYDIK--KTVFVG 342
Y+ F+S+++ E + + N G I +D A +K G + +++ TVF+G
Sbjct: 134 FGYVEFESKEACEKSRSLNGTDYNGRTIVVDMARSGQKGGAAGTEGRVFNKTDDNTVFLG 193
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYVLFKT 391
N+PFDV +++ L L++ E V IR P R G KG A+ +T
Sbjct: 194 NIPFDVDHDDL------LAHLKTYAE-VTQIRIPEDRETGRPKGFAFASCET 238
>gi|410921714|ref|XP_003974328.1| PREDICTED: nucleolin-like isoform 2 [Takifugu rubripes]
Length = 672
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + A+ N + G ++LD P K+ ED D + T+FV NLP+
Sbjct: 288 GYVDFSSEEDMQKAMELNGKKVMGMELKLD--MPRSKETTQEDKKERDTR-TLFVKNLPY 344
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+++ ++F E +V+ IR P + G +GIAY+ FK+
Sbjct: 345 SATADDLKEVF------EDAVD----IRVPQGQNGSNRGIAYIEFKS 381
>gi|387593127|gb|EIJ88151.1| hypothetical protein NEQG_01595 [Nematocida parisii ERTm3]
gi|387596161|gb|EIJ93783.1| hypothetical protein NEPG_01355 [Nematocida parisii ERTm1]
Length = 316
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIF+ L ++ L + F KFG+ I++ +IPR +
Sbjct: 90 RTIFIKGLNFSATEEDLRELFGKFGD----------IVEVRIPR-------SRDGPGGKG 132
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIK--KTVFVG 342
Y+ F+++++ E + N G I +D A ++ G D +Y+ TVF+G
Sbjct: 133 FGYVEFETKEACEKSRELNGTDFNGRSIVVDLARSGQRVGAGADGQKVYNKTDDSTVFLG 192
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYV 387
N+PFDV E+ L+ L++ E V +R P R G KG A+
Sbjct: 193 NIPFDVDHEDF------LSHLKTYAE-VSQVRIPEDRETGRPKGFAFA 233
>gi|2780748|dbj|BAA24361.1| hnRNP JKTBP [Homo sapiens]
gi|4512255|dbj|BAA75240.1| JKTBP1 [Homo sapiens]
Length = 301
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 27 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 66
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 67 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEIEN 142
>gi|384494999|gb|EIE85490.1| hypothetical protein RO3G_10200 [Rhizopus delemar RA 99-880]
Length = 246
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL + + +LI E + +++ P+++ +P+ Q ++N +
Sbjct: 12 TVYIGNLDERCTE-SLIWELM---------LQAGPVVNVHLPKDRV---TQTHQN----Y 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ N + G +R+++A RK L D+ T+F+GNL
Sbjct: 55 GFVEFLTEEDADYAMKIMNQVRLYGKPVRVNKATSDRKNL--------DVGATLFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+V ++ +Y F + V R+ R P KG ++ +
Sbjct: 107 PEVDEKILYDTFSAFGLI---VNTPRISRDPDTGALKGFGFISY 147
>gi|240848881|ref|NP_001155373.1| spliceosome associated protein-like [Acyrthosiphon pisum]
gi|239792048|dbj|BAH72409.1| ACYPI000210 [Acyrthosiphon pisum]
Length = 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDEKVSDTLMWELFVQAG----------PVVNVHMPKDRVTQSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E + A+ NM + G IR+++A +K L D+ VF+GNL
Sbjct: 57 GFVEFLAEDDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P KG A++ + +
Sbjct: 109 SEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINYAS 151
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 208
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 36/206 (17%)
Query: 198 KRKKADNE-TEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA+ E T+ + E+ D +G +FVGNL V ++ L +EF +FG +VR
Sbjct: 240 KKRKAEAEATQTTKKSKTEQNGDAQGSP--NLFVGNLSWNVDEEWLGREFEEFGP-KAVR 296
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL 315
I + D R Y+ F++ ++ AAL A + + L
Sbjct: 297 I----VTDRATGRSKGF-------------GYVEFETVEAATAALNAKKGTDLDNRPLNL 339
Query: 316 DRACP------PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLES 365
D + P PR + + D+ T+FVGNL FD + + ++F
Sbjct: 340 DFSTPRPEGQNPRDRASSRASQHGDVPSRPSDTLFVGNLSFDATPDSVTEIFQEYG---- 395
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ V + P + KG YV F +
Sbjct: 396 TITRVSLPTKPEDGMPKGFGYVGFSS 421
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 58 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 96
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 97 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 145
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 146 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 194
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|241652774|ref|XP_002410414.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215501630|gb|EEC11124.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 196
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 18/86 (20%)
Query: 320 PPRKKLKGED------------APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSV 367
PP KK KGE+ PL DI+ TVF+ NL +DV+D+++ ++F + ++
Sbjct: 110 PPSKKSKGEENEGAVHGETVEPDPLRDIR-TVFLSNLAYDVQDDQLTEIFKEVG----TI 164
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTRV 393
E +R++R R KG Y++F +V
Sbjct: 165 EELRLVRDYKGR-SKGFGYLVFADQV 189
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 208
>gi|88682985|gb|AAI05387.1| HNRPDL protein [Bos taurus]
Length = 336
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 62 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 101
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 102 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 151
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 152 FVGGLSPDTSEEQIKEYFGAFGEIEN 177
>gi|350593982|ref|XP_003483806.1| PREDICTED: nucleolin-like [Sus scrofa]
Length = 467
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
+ R PI P + A+L++ Y+ F+S + E AL + GN I+
Sbjct: 77 LTFRGPPI---PTPSETALLEELGAGEGQPKFGYVDFESAEDLEKALELTGLKVFGNEIK 133
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIR 374
L+ K KG+D+ +T+ NLP+ V +E+ ++F E +VE +R++
Sbjct: 134 LE-------KPKGKDSKKDRDARTLLAKNLPYKVTQDELKEVF------EDAVE-IRLVS 179
Query: 375 HPHMRVGKGIAYVLFKT 391
KGIAY+ FKT
Sbjct: 180 KDGK--SKGIAYIEFKT 194
>gi|119188517|ref|XP_001244865.1| hypothetical protein CIMG_04306 [Coccidioides immitis RS]
gi|392867773|gb|EAS33469.2| nucleic acid-binding protein [Coccidioides immitis RS]
Length = 334
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL V L EF K G ++ VR+ + D + KG
Sbjct: 142 TIYVGNLFFDVTAGDLKNEFSKCGPVEGVRL----LYDYRGVSKG--------------F 183
Query: 287 AYIVFKSEQSTEAALAF-NMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F ++ E A+A + + G H+ ++ A K D P +T+++GN+P
Sbjct: 184 GYVKFHDVETAEKAVALMHGQLFEGRHLAVNFARVELDKPMNHD-PTKPPTRTLYIGNIP 242
Query: 346 FDVKDEEIYQLF 357
F++ D ++ +LF
Sbjct: 243 FEMTDRDLNELF 254
>gi|444721584|gb|ELW62314.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 301
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GKL F+G L KK L + +FGE+ I++ DT R
Sbjct: 27 DDGKL----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKT----DTVTGRSRGF------ 72
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 73 -------GFVLFKDAASVDKVLELKEHKLDGKLIGPQRA----KALKGKEPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEIEN 142
>gi|17530817|ref|NP_511058.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|7290689|gb|AAF46136.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|68051249|gb|AAY84889.1| RE50839p [Drosophila melanogaster]
gi|220952204|gb|ACL88645.1| Spx-PA [synthetic construct]
Length = 347
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + + NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+V ++ +Y F + ++ +++R P K A++ F +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFAS 151
>gi|303323779|ref|XP_003071881.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111583|gb|EER29736.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031835|gb|EFW13793.1| nucleic acid-binding protein [Coccidioides posadasii str. Silveira]
Length = 334
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL V L EF K G ++ VR+ + D + KG
Sbjct: 142 TIYVGNLFFDVTAGDLKNEFSKCGPVEGVRL----LYDYRGVSKG--------------F 183
Query: 287 AYIVFKSEQSTEAALAF-NMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F ++ E A+A + + G H+ ++ A K D P +T+++GN+P
Sbjct: 184 GYVKFHDVETAEKAVALMHGQLFEGRHLAVNFARVELDKPMNHD-PTKPPTRTLYIGNIP 242
Query: 346 FDVKDEEIYQLF 357
F++ D ++ +LF
Sbjct: 243 FEMTDRDLNELF 254
>gi|317139650|ref|XP_003189187.1| C6 transcription factor [Aspergillus oryzae RIB40]
Length = 1086
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL V L K+ K+G ++SV I D + KG
Sbjct: 907 TVFVGNLFYDVTADDLRKQMEKYGVVESVYI----TFDNRGMSKG--------------F 948
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S S A+ A +M V G + + A + + L I +T+++GNLP
Sbjct: 949 GYVQFDSIDSARRAIDAMHMRVYEGRRVIVAFA----QNNIDQHRNLRPISRTLYLGNLP 1004
Query: 346 FDVKDEEIYQLF 357
F++ D +I +LF
Sbjct: 1005 FEMTDRDINELF 1016
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 71 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 109
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 110 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 158
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 159 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 207
>gi|356542361|ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 958
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV-RVIRHPHMRVGKGIAYVLFKT 391
D+++TVF+ NLPF+ +EE+ Q F G ++E V + +V + P +G ++ FKT
Sbjct: 495 DLQRTVFISNLPFECDNEEVKQRFSGFGEIEYFVPVLHQVTKRP-----RGTGFLKFKT 548
>gi|449489569|ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Cucumis sativus]
Length = 800
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 121/307 (39%), Gaps = 75/307 (24%)
Query: 32 VASSLFSDSNPFKRQHRESQSAENESIFNPMNSDSLDSNNSELKKIKKTRQEKPNPDLPD 91
+ S+ DS PF + S SA +++P L +NN EKPN
Sbjct: 304 IKPSVGDDSMPFHGVYSGSGSAGEADLYDP--DQPLWNNNCP---------EKPN----- 347
Query: 92 AEGAATKTLSLSN-KSTKLIYPRSILGFEPNGTIENEIKKEHSSNVGSESYLNRQKQN-- 148
+LS S+K+ S +G +P + N+++K + + G S + +
Sbjct: 348 ---------ALSGMHSSKIDEVESFIGDDP--SDRNQVRKCDAGDNGCTSRITAPSGSHV 396
Query: 149 SNFSVEGKKRSENKKTKKRKRDDVEK----DYVEKKYGVIAKEEEGKK------------ 192
++ SV G+ S N++ K K D V D K+ V+ +G
Sbjct: 397 TSSSVWGRVGSRNRQDVKGKLDPVNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDAH 456
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKK-KTLIKEFIKFGE 251
G+ KA ++ M RK K T+FV +PL+ K +TL+ F K+GE
Sbjct: 457 TKAGDLSLKAQSDANTMRTMRKPSQ-----KATCTLFVNGIPLQSNKTETLLSHFNKYGE 511
Query: 252 IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGN 311
+ ID IP A+S A++ F + EAAL AV+G
Sbjct: 512 V----------IDIYIP-------------ANSQRAFVQFSKREEAEAALKSPDAVMGNR 548
Query: 312 HIRLDRA 318
I+L A
Sbjct: 549 FIKLWWA 555
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 35/149 (23%)
Query: 215 EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAIL 274
E G DD+ R +FVG L + +K L F ++GEIDS+ +++ P T +G
Sbjct: 33 EIGRDDD----RKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDP---TTGRSRG--- 82
Query: 275 QKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
A+IV+KS S + +A G+HI ++ P KK K
Sbjct: 83 -----------FAFIVYKSADSIDKVVA------AGDHIINNKKVDP-KKAKARTG---- 120
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDL 363
+FVG L ++ D+EI F ++
Sbjct: 121 ---KIFVGGLIPEISDDEIRAYFAQFGNI 146
>gi|18399701|ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis thaliana]
gi|16604631|gb|AAL24108.1| unknown protein [Arabidopsis thaliana]
gi|27754736|gb|AAO22811.1| unknown protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D ++T+F+ NLPFDV EE+ Q F ++ES + ++ H + +G A+V FKT
Sbjct: 558 DFERTLFIRNLPFDVTKEEVKQRFTVFGEVES----LSLVLHKVTKRPEGTAFVKFKT 611
>gi|255710741|ref|XP_002551654.1| KLTH0A04554p [Lachancea thermotolerans]
gi|238933031|emb|CAR21212.1| KLTH0A04554p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 21/96 (21%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
RTIFVG LP V + L KEF++FGEI+ VR+ + N
Sbjct: 101 YRTIFVGRLPFAVTEVELQKEFVRFGEIEKVRV-----------------VRDKTSNKSR 143
Query: 285 VHAYIVFKSEQSTEAA---LAFNMAV-IGGNHIRLD 316
+ +I+FK E S +A + + V IGG + +D
Sbjct: 144 GYGFIMFKDEISARSACREIGVHRGVQIGGRPVIVD 179
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
D +T+FVG LPF V + E+ + F + +E VRV+R +G +++FK +
Sbjct: 99 DPYRTIFVGRLPFAVTEVELQKEFVRFGE----IEKVRVVRDKTSNKSRGYGFIMFKDEI 154
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 196 GEKRK-----KADNETEDML----VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEF 246
GEKR+ + + E D L + + +EGFD + +RTIFV + K ++ L + F
Sbjct: 118 GEKRRYDETYRYEKEIPDRLPAEQIAKDDEGFDRD---MRTIFVAQVARKADERDLFQFF 174
Query: 247 IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMA 306
+ G++ VRI I DT+ R I AY+ F+ ++ AA+ +
Sbjct: 175 SEAGKVVDVRI----IKDTQTRRSKGI-------------AYVEFEKQEQCVAAVQKSGQ 217
Query: 307 VIGGNHIRLDRACPPR---KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDL 363
++ G + + + + +L + A D+ + V NL D+ ++++ LF
Sbjct: 218 LLCGFPVVVQASQAEKNQAARLAAQVAGELDLPAKLQVDNLHMDIAEDDLQTLFSPFG-- 275
Query: 364 ESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +VR+ + GKG+ V FKT
Sbjct: 276 --KVLSVRINKEHGRSTGKGV--VEFKT 299
>gi|367042708|ref|XP_003651734.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
gi|346998996|gb|AEO65398.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 28/143 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
++FV NL +V ++ L K F K+GE+ S T I R L K
Sbjct: 132 SVFVRNLVFEVTEEHLQKAFSKYGEVAS----------TFIARDPRGLSKGFG------- 174
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPP-----RKKLKGEDAPLYDIKKTVF 340
++ F + ++ E A + N + G I R P +K K P + F
Sbjct: 175 -FVTFTTPEAVETACSQVNGSFWHGRRITCVRRTQPAPAGVKKPAKSPPGPTAQL----F 229
Query: 341 VGNLPFDVKDEEIYQLFCGLNDL 363
+GN+P++ D E+ +LF G+ +L
Sbjct: 230 IGNIPYETTDAELNRLFRGIENL 252
>gi|299742932|ref|XP_001835432.2| RNA-binding protein [Coprinopsis cinerea okayama7#130]
gi|298405419|gb|EAU86400.2| RNA-binding protein [Coprinopsis cinerea okayama7#130]
Length = 697
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 105/289 (36%), Gaps = 129/289 (44%)
Query: 226 RTIFVGNLPLKVKKKTLIKE--------FIKFGEIDSVRIRSVPI--IDTKIPRKG---- 271
RTIFVGNLPL V +K +++ + +I+S+R RSVP K+P G
Sbjct: 240 RTIFVGNLPLAVAEKRPLQKQLQKHILALVPTAKIESLRFRSVPFQAPTAKLPDDGTDKP 299
Query: 272 ------------------------AILQKQINENA------------------------- 282
+ LQ + +E+A
Sbjct: 300 TDKPKPKPRQHELDRASTWRSSKDSSLQDKKDEDALKKDEKRYLTPSQKKKIAFINQEFH 359
Query: 283 ---DSVHAYIVFKS--EQST---------------EAALA----FNMAVIGGNHIRLDRA 318
D+V+AYIVF +QST EAA N V IR+DR
Sbjct: 360 ANADTVNAYIVFAHPVDQSTRPKNLPPLPVTMCPYEAAKVAVERCNNTVFMERIIRVDRV 419
Query: 319 CPPRKKLKGE-------------DAPLYDI--KKTVFVGNLPFDVKDEEIYQLFCGL--- 360
K+KG P+ D K ++FVGNL F+ K+E++ F L
Sbjct: 420 G----KVKGSGRKGAEEDEDGEEARPMVDADPKLSIFVGNLDFESKEEDLRVFFETLLVA 475
Query: 361 ------NDLESSVEA--------------VRVIRHPHMRVGKGIAYVLF 389
+ E ++E VR++R ++GKG AYV F
Sbjct: 476 EKGAPGGEGEETIEVDGVVIKKPKTWVTHVRIVRDRDTQLGKGFAYVQF 524
>gi|225449617|ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIKKTVFVGNLP 345
A I FK+E + + ALA + A +GG +++ R + AP + + ++VGNLP
Sbjct: 226 AIISFKTEAAAKRALALDGADMGGLFLKIQPYKTTRANKSSDFAPEMVEGYNRIYVGNLP 285
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+D+ ++E+ + F N V ++R + +G A+V F
Sbjct: 286 WDITEDEVRKFFSRCN-----VSSIRFGMDKETQEFRGYAHVDF 324
>gi|156032453|ref|XP_001585064.1| hypothetical protein SS1G_13924 [Sclerotinia sclerotiorum 1980]
gi|154699326|gb|EDN99064.1| hypothetical protein SS1G_13924 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 494
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 32/186 (17%)
Query: 198 KRKKADNETEDMLVHRK-EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA+NE E K EE D+G + +FVGNL + + L +EF +FGEI R
Sbjct: 242 KKRKAENEPEPSAKKTKTEETAADDGSP-KNLFVGNLSWNIDDEWLYREFEEFGEITGAR 300
Query: 257 IRSVPIIDTKIPR-KGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIR 314
+ I D R KG Y+ F KS + A A A+I G
Sbjct: 301 V----ISDKNTGRSKG--------------FGYVEFAKSADAAAALAAKKGALIDGREAN 342
Query: 315 LDRACP-----PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEI-YQLFCGLNDLE 364
+D + P P+ + A D K T+F+GNL FD + Y F + D
Sbjct: 343 VDFSTPRENVAPKDRANNRAAQFGDAKNPPSDTLFLGNLSFDADENGFGYVTFGSVEDAT 402
Query: 365 SSVEAV 370
++ +A+
Sbjct: 403 AAYDAM 408
>gi|330914835|ref|XP_003296804.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
gi|311330893|gb|EFQ95099.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
Length = 326
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 22/136 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+ +++GNL +V L + F +FGE++SV+I + D + +G
Sbjct: 136 KMLYIGNLYYEVTADQLKRVFSRFGEVESVKI----VYDNRGLSRG-------------- 177
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI---KKTVFV 341
Y+ F + +AA+ +M V G ++ + P + A ++ KT+F+
Sbjct: 178 FGYVEFGNLADAQAAIDNLDMQVFEGRNMVVQYHQPKPNSMSRSSAGSFEANTPSKTLFI 237
Query: 342 GNLPFDVKDEEIYQLF 357
GN+ F++ D+++ LF
Sbjct: 238 GNMSFEMSDKDLNDLF 253
>gi|212545797|ref|XP_002153052.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
gi|210064572|gb|EEA18667.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
Length = 308
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI++GNL + + L + FG ++ I I D + KG
Sbjct: 111 TIYIGNLFFDITAEDLKSKMESFGVVEKAAI----ISDARGLSKG--------------F 152
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNL 344
Y+ F S ++ + A+ N V G + + A PR+K + + P +++++GNL
Sbjct: 153 GYVTFDSVEAAQRAIEEMNQQVYEGRRVLVQFSAAGPREKFRPKGQPT----RSLYIGNL 208
Query: 345 PFDVKDEEIYQLFCGL-NDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+D+ D E+ +LF + N +E V R +P +G A+ F
Sbjct: 209 AYDLTDRELNELFKSVRNVIEVRVAVDRQTGNP-----RGFAHADF 249
>gi|238483099|ref|XP_002372788.1| nucleic acid-binding protein [Aspergillus flavus NRRL3357]
gi|220700838|gb|EED57176.1| nucleic acid-binding protein [Aspergillus flavus NRRL3357]
Length = 227
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL V L K+ K+G ++SV I D + KG
Sbjct: 48 TVFVGNLFYDVTADDLRKQMEKYGVVESVYI----TFDNRGMSKG--------------F 89
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S S A+ A +M V G + + A + + L I +T+++GNLP
Sbjct: 90 GYVQFDSIDSARRAIDAMHMRVYEGRRVIVAFAQNNIDQHRN----LRPISRTLYLGNLP 145
Query: 346 FDVKDEEIYQLF 357
F++ D +I +LF
Sbjct: 146 FEMTDRDINELF 157
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 67/182 (36%), Gaps = 42/182 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V ++ L +EF FGE+ VRI + D R
Sbjct: 288 LFVGNLSWNVDEEWLRQEFETFGELSGVRI----VTDRDSGRSRGF-------------G 330
Query: 288 YIVFKSEQSTEAALAFNMAV-IGGNHIRL-----------------DRACPPRKKLKGED 329
Y+ + S A I G I L DRA + +
Sbjct: 331 YVEYVSAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNNNNQDRAQARARNFGDQA 390
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+P D T+FVGN+PF ++ + +LF ++ +R+ P KG YV F
Sbjct: 391 SPESD---TLFVGNIPFSANEDSVSELFG----QSGTIVGIRLPTDPESGRPKGFGYVQF 443
Query: 390 KT 391
+
Sbjct: 444 SS 445
>gi|53792441|dbj|BAD53349.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 407
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 28/124 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIID--TKIPRKGAILQKQINENAD 283
R IFVG LP+ +K L + F KFGE++ R++ +ID TK+PR
Sbjct: 219 RKIFVGGLPVSATEKKLKEYFNKFGEVN----RAIVVIDLNTKMPRG------------- 261
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-------KLKGEDAPLYDIK 336
+I F SE+ST AL + + G + + A P ++ KL + P Y
Sbjct: 262 --FGFIQFASEESTARALKKDKHFLCGQWVEVSLAMPKQQNAASGTSKLSVQARPFYPTT 319
Query: 337 KTVF 340
+ F
Sbjct: 320 SSNF 323
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V + L F + G + +I I E +
Sbjct: 8 RTLYVGNLDASVSEDLLCALFSQIGAVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + QS AL A N ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQSAATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ + + + F ++ + R++R P KG A+V F
Sbjct: 104 SPEIETQTLKEAFAPFGEISN----CRIVRDPQTLKSKGYAFVSF 144
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 49/184 (26%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP---QTLKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC------------------PPRKKLKGE 328
++ F + EAA+ A N +G IR + + P +++ +
Sbjct: 141 FVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQ 200
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+P TV+ G + DE I + F +++ +RV + KG A++
Sbjct: 201 SSP---TNCTVYCGGFTNGITDELIKKTFSPF----GTIQDIRVFKD------KGYAFIK 247
Query: 389 FKTR 392
F T+
Sbjct: 248 FTTK 251
>gi|259482511|tpe|CBF77063.1| TPA: pre-mRNA splicing factor (Prp24), putative (AFU_orthologue;
AFUA_2G01820) [Aspergillus nidulans FGSC A4]
Length = 1290
Score = 44.7 bits (104), Expect = 0.072, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 31/169 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + + F K+GE IID + P + N
Sbjct: 906 TLFVTNFPPTADENYIRDLFSKYGE----------IIDIRFP--------SLKYNTHRRF 947
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ + +ALA + + +G G H+ + + P RK + + P+Y+ + + V N+
Sbjct: 948 CYLQFKTSVAAHSALALDGSAVGNGLHLVVKISDPSRK--QDRNGPIYE-GREIHVSNVN 1004
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTR 392
+ ++++ +LF S V ++R P G KG YV+F ++
Sbjct: 1005 WSASEDDLKELF-------SRFGTVELVRLPRKVDGGSKGFGYVVFSSK 1046
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VG L V + L E FGE+ S R++ + T +G
Sbjct: 205 IWVGQLSWNVDNEWLKSEMEAFGEVTSARVQ---LDRTTGKSRG--------------FG 247
Query: 288 YIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKK-----TVFV 341
Y+ F + + + A + G IR+D + P + + A ++ ++ T+F+
Sbjct: 248 YVDFATAAAAKKAFEEGQGKEVDGRAIRIDLSTP-KGDVTDNRAKKFNDQRSAPSSTLFI 306
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
GNL FD+ +++++ F V VR+ + P KG YV F +
Sbjct: 307 GNLSFDISEDDVWNAFS----EHGEVSGVRLPKDPDSGRPKGFGYVEFAAQ 353
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + + + F + GE+ VR+ P D+ P+
Sbjct: 303 TLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDP--DSGRPKG---------------F 345
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F +++S +AA+ A + G +RLD + P
Sbjct: 346 GYVEFAAQESAQAAIDAMTGQELAGRPLRLDFSTP 380
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q +
Sbjct: 14 TVYVGGLDEKVTEALLWELFLQAG----------PVVNTHMPKDRVTQSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKVLNMIKLYGKPVRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R KG A++ F +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDVESGNSKGYAFINFAS 151
>gi|149046814|gb|EDL99588.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_c
[Rattus norvegicus]
Length = 157
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 30/161 (18%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 27 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 66
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 67 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV 380
FVG L D +E+I + F ++ V H RV
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEVGRVCTRVSDCTHVWSRV 157
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 76/204 (37%), Gaps = 37/204 (18%)
Query: 187 EEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEF 246
EE G+ E + D + K E +D GK+ FVG L KK L F
Sbjct: 79 EEAGQSAATAEAAGSQNGAEGDQINASKNE--EDAGKM----FVGGLSWDTSKKDLKDYF 132
Query: 247 IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMA 306
KFGE+ I+ P N +I+FK S + L
Sbjct: 133 TKFGEVTDCTIKMDP-----------------NTGRSRGFGFILFKEAASVDKVLEQKEH 175
Query: 307 VIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
+ G R P+K + + P+ K +FVG L + +E+I + F +
Sbjct: 176 KLDG------RVIDPKKAMAMKKDPV----KKIFVGGLNPEAAEEKIREYFGEFGE---- 221
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFK 390
+EA+ + P +G ++ FK
Sbjct: 222 IEAIELPMDPKTNKRRGFVFITFK 245
>gi|358372661|dbj|GAA89263.1| C6 transcription factor [Aspergillus kawachii IFO 4308]
Length = 1068
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ V ++ L K K+G ++ V V ++D + KG +
Sbjct: 884 TVFIGNIFYDVTREDLKKAMEKYGVVEKV----VLVLDNRGISKG--------------Y 925
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ A N+ + G + + A + +AP +T+++GNLP
Sbjct: 926 GYVQFDSIDAAQRAVDALNLRLFEGRRVTVQFAQNNVYHRRQLNAP----TRTLYIGNLP 981
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F++ D ++ +LF D+++ V+ +RV +G A+ F
Sbjct: 982 FEMTDRDLNELF---KDVQNVVD-IRVAVDRRTGQARGFAHAEF 1021
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V ++ L F + G + +I I E +
Sbjct: 8 RTLYVGNLDTSVSEELLCALFSQIGAVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + Q AL A N ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQCAATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ + + + F ++ + R++R P KG A+V F
Sbjct: 104 SPEIETQTLKEAFAPFGEISN----CRIVRDPQTMKSKGYAFVSF 144
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 49/184 (26%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP---QTMKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC------------------PPRKKLKGE 328
++ F + EAA+ A N +G IR + + P +++ +
Sbjct: 141 FVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQ 200
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+P TV+ G + D+ I + F +++ +RV + KG A++
Sbjct: 201 SSP---TNCTVYCGGFTNGITDDLITKTFSPF----GTIQDIRVFKD------KGYAFIK 247
Query: 389 FKTR 392
F T+
Sbjct: 248 FTTK 251
>gi|403346976|gb|EJY72898.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 310
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 25/175 (14%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
++G + + +F+ +P + + I EF F EI + I++ K+PR +
Sbjct: 77 NKGSISKQVFISGIPYECNEDE-ITEF--FNEIKA------NIVEIKLPRYQ-------D 120
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA-----PLYD 334
+A++ S+++ + ALA I G ++ + A R L + + D
Sbjct: 121 SGRCRGYAHVTLNSQKAVDKALAMTGQSIKGRYLDIKEAEGQRSSLSKDQVRQIAESMPD 180
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
KT+FV LP++ ++++I F +++S +R+ + + KG AY+ F
Sbjct: 181 DCKTLFVKGLPYEFREDDIGDRFRKFGEIKS----IRLSYNWQTKQFKGFAYLTF 231
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 82/202 (40%), Gaps = 33/202 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E + K E EG ++ +FVG+L + + L +EF FGEI R+
Sbjct: 172 KKRKAEAAAEPAVKKTKTEAPASEG--IKNLFVGSLSWNIDEDWLRREFEGFGEITGCRV 229
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
I D + R Y+ F S A A + + G + +D
Sbjct: 230 ----ITDRESGRSKGF-------------GYVEFASAADAAKAKAEMHEYELDGRGLNVD 272
Query: 317 RACPPRKKLKGEDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVR 371
+ P K + A Y K+ T+F+GNL FD +E I ++F ++ R
Sbjct: 273 FSTPREKPDQSARANKYGDKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNI------TR 326
Query: 372 VIRHPHMRVG--KGIAYVLFKT 391
V G KG YV F T
Sbjct: 327 VSLPTDRDTGSLKGFGYVDFGT 348
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 203
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++G+I+S+ +++ P N
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDP-----------------NTGRSRG 145
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A + VI N+ ++D P + K + +FVG L
Sbjct: 146 FAFIVYKSADSIDKVVAVSEHVI--NNKKVD---PKKAKAR---------YGKIFVGGLT 191
Query: 346 FDVKDEEIYQLFCGLNDL 363
++ DEEI F ++
Sbjct: 192 SEISDEEIKTFFGQFGNI 209
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 30/147 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D+GK+ F+G L KK L +FGE+ I++ P+
Sbjct: 27 EDDGKM----FIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLT--------------- 67
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+++FK +S + L + G I RA K +KG++ P K
Sbjct: 68 --GRSRGFGFVLFKDAESVDRVLELTEHKLDGKLIDPKRA----KAIKGKEPP-----KK 116
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLES 365
VFVG L D+ +E++ + F ++ES
Sbjct: 117 VFVGGLSPDITEEQLREYFGVYGEIES 143
>gi|387594015|gb|EIJ89039.1| hypothetical protein NEQG_00858 [Nematocida parisii ERTm3]
gi|387595783|gb|EIJ93406.1| hypothetical protein NEPG_01748 [Nematocida parisii ERTm1]
Length = 512
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 30/165 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG++P+ + L + F K G+I ++ +IL+K+++ D +
Sbjct: 20 TIYVGDIPMATTESELFQIFSKVGQIYTI----------------SILRKEVSIVKDKCY 63
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AY+ F E S A+ FN + G+ IR+ P K ++ + + + + + NLP
Sbjct: 64 AYVTFFDESSVPIAIETFNFYSLHGSQIRV---MPFNK-----ESVVGNREGNIVIKNLP 115
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ ++ +Y F + S +V+++ ++ G+ Y+ +K
Sbjct: 116 KETDNQTLYDTFIVFGPILSC----KVVKN-NLSECTGVGYIQYK 155
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 31/138 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++G+I+S+ +++ P N
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDP-----------------NTGRSRG 145
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A + VI N+ ++D P + K + +FVG L
Sbjct: 146 FAFIVYKSADSIDKVVAVSEHVI--NNKKVD---PKKAKAR---------YGKIFVGGLT 191
Query: 346 FDVKDEEIYQLFCGLNDL 363
++ DEEI F ++
Sbjct: 192 SEISDEEIKTFFGQFGNI 209
>gi|444723245|gb|ELW63904.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 326
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ T R
Sbjct: 27 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPV--TGRSRG--------- 71
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 72 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEIEN 142
>gi|440302617|gb|ELP94924.1| nucleolar protein, putative [Entamoeba invadens IP1]
Length = 450
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG--AILQKQINENADS 284
T+F+ N+ K+ KT+ FG + S RIR V D P G + N+ +
Sbjct: 196 TVFIQNVNKKLDYKTIGTFLRTFGRVVSYRIRCVA-RDVDTPTHGFYTYANMKCNDVKKT 254
Query: 285 VHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ VFK+ ++ E A + G H+R D + + +G +K+TV +
Sbjct: 255 FSVFAVFKNPETAENIANQLDGLFYEGFHLRAD-VMSNKGQHRG-------VKRTVTIAG 306
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
LP+ ++E++ + G VE V ++R + G +V F+ +
Sbjct: 307 LPYKTEEEDVRKWLDGKG---LKVERVALLRIKETQQCSGFGFVTFENK 352
>gi|76096336|ref|NP_001028868.1| heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
gi|123783017|sp|Q3SWU3.1|HNRDL_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|74356265|gb|AAI04684.1| Heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
Length = 322
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 26/137 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+G L KK L + +FGE+ I++ P+
Sbjct: 53 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT-----------------GRSRGFG 95
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+++FK S + L + G I RA K LKG++ P K VFVG L D
Sbjct: 96 FVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKVFVGGLSPD 146
Query: 348 VKDEEIYQLFCGLNDLE 364
+E+I + F ++E
Sbjct: 147 TSEEQIKEYFGAFGEIE 163
>gi|449446871|ref|XP_004141194.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Cucumis sativus]
Length = 901
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 121/307 (39%), Gaps = 75/307 (24%)
Query: 32 VASSLFSDSNPFKRQHRESQSAENESIFNPMNSDSLDSNNSELKKIKKTRQEKPNPDLPD 91
+ S+ DS PF + S SA +++P L +NN EKPN
Sbjct: 304 IKPSVGDDSMPFHGVYSGSGSAGEADLYDP--DQPLWNNNCP---------EKPN----- 347
Query: 92 AEGAATKTLSLSN-KSTKLIYPRSILGFEPNGTIENEIKKEHSSNVGSESYLNRQKQN-- 148
+LS S+K+ S +G +P + N+++K + + G S + +
Sbjct: 348 ---------ALSGMHSSKIDEVESFIGDDP--SDRNQVRKCDAGDNGCTSRITAPSGSHV 396
Query: 149 SNFSVEGKKRSENKKTKKRKRDDVEK----DYVEKKYGVIAKEEEGKK------------ 192
++ SV G+ S N++ K K D V D K+ V+ +G
Sbjct: 397 TSSSVWGRVGSRNRQDVKGKLDPVNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDAH 456
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKK-KTLIKEFIKFGE 251
G+ KA ++ M RK K T+FV +PL+ K +TL+ F K+GE
Sbjct: 457 TKAGDLSLKAQSDANTMRTMRKPSQ-----KATCTLFVNGIPLQSNKTETLLSHFNKYGE 511
Query: 252 IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGN 311
+ ID IP A+S A++ F + EAAL AV+G
Sbjct: 512 V----------IDIYIP-------------ANSQRAFVQFSKREEAEAALKSPDAVMGNR 548
Query: 312 HIRLDRA 318
I+L A
Sbjct: 549 FIKLWWA 555
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 73 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 111
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 112 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 160
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 161 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 209
>gi|351704017|gb|EHB06936.1| Heterogeneous nuclear ribonucleoprotein A/B, partial
[Heterocephalus glaber]
Length = 261
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 2 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 44
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 45 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 93
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 94 EATEEKIREYFGDFGE----IEAIELPMDPKLNKRRGFVFITFK 133
>gi|323346845|gb|EGA81124.1| Nop13p [Saccharomyces cerevisiae Lalvin QA23]
Length = 352
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFK 288
>gi|7417424|gb|AAF62554.1| nucleolin [Oncorhynchus mykiss]
Length = 255
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
Y+ F S + + A+ N G +++D+A R K ++ +T+FV NLPF
Sbjct: 69 YVEFASAEDMQTAMELNGKKCMGQELKMDKA---RSKGNSQEEKKDRDARTLFVKNLPFS 125
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
++++ ++F ++VE IR P + G +GIAY+ FKT
Sbjct: 126 ATEDDLKEVFA------NAVE----IRIPTGQDGSNRGIAYIAFKT 161
>gi|49618989|gb|AAT68079.1| nucleolin [Danio rerio]
Length = 667
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F SE+ + AL N + G ++LD+A R K ++ +T+FV NLP+
Sbjct: 292 GYVDFASEEELQKALELNGKKLLGQPVKLDKA---RSKENSQENKKERDARTLFVKNLPY 348
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ +++ ++F + +V+ IR P G +GI Y+ FKT
Sbjct: 349 SITQDDLREIF------DQAVD----IRVPMGNTGTSRGIVYIEFKT 385
>gi|346979496|gb|EGY22948.1| gar2 [Verticillium dahliae VdLs.17]
Length = 485
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 33/197 (16%)
Query: 207 EDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK 266
+D ++ K+ +D + T+FVG+L V L + F +F + S R+ I D +
Sbjct: 207 DDPVIPPKKARTEDMSEQSATLFVGSLAWAVNDDILYQAFSEFPNLTSARV----ITDRE 262
Query: 267 IPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRK 323
R Y+ F +S +AAL A N + G ++ +D + P R
Sbjct: 263 GGRSRGF-------------GYVDFSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERS 309
Query: 324 KLKGEDA---------PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIR 374
G+ A L T+FVGN+ F++ + ++ F + + S VR+
Sbjct: 310 DNPGDRANDRAQRHGDSLSPESDTLFVGNISFEMDQDTVHAFFATVAEPTS----VRLPT 365
Query: 375 HPHMRVGKGIAYVLFKT 391
P KG YV F +
Sbjct: 366 DPESGNLKGFGYVSFSS 382
>gi|291396317|ref|XP_002714523.1| PREDICTED: zinc finger CCHC-type and RNA binding motif 1-like
[Oryctolagus cuniculus]
Length = 246
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHP 376
RA P +++ G AP K TV+V NLPF + + ++Y++F V V +++
Sbjct: 22 RAATPSEEMSGGLAP---SKSTVYVSNLPFSLTNNDLYRIFSKYG----KVVKVTIMKDK 74
Query: 377 HMRVGKGIAYVLF 389
R KGIA++LF
Sbjct: 75 DTRKSKGIAFILF 87
>gi|302414816|ref|XP_003005240.1| gar2 [Verticillium albo-atrum VaMs.102]
gi|261356309|gb|EEY18737.1| gar2 [Verticillium albo-atrum VaMs.102]
Length = 437
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 33/177 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG+L V L + F +F + S R+ I D + R
Sbjct: 178 TLFVGSLAWAVNDDILYQAFSEFPNLTSARV----ITDREGGRSRGF------------- 220
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDA---------PLYD 334
Y+ F +S +AAL A N + G ++ +D + P R G+ A L
Sbjct: 221 GYVDFSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSP 280
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+FVGN+ F++ + ++ F + + S VR+ P KG YV F +
Sbjct: 281 ESDTLFVGNISFEMDQDTVHAFFATVAEPTS----VRLPTDPESGNLKGFGYVSFSS 333
>gi|90076284|dbj|BAE87822.1| unnamed protein product [Macaca fascicularis]
Length = 231
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 27 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 66
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG+ P K V
Sbjct: 67 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKGPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEIEN 142
>gi|417409049|gb|JAA51051.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 252
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD GK+ FVG L K L F KFGE+ I+ P
Sbjct: 34 DDAGKM----FVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDP----------------- 72
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 73 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKEPV----K 121
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +EEI + F + +EA+ + P +G ++ FK
Sbjct: 122 KIFVGGLNPEATEEEIREYFGEFGE----IEAIDLPMDPKSHKRRGFVFITFK 170
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V ++ LI F G + + +I I E +
Sbjct: 7 KTLYVGNLDSSVSEELLIALFGTMGAVKNCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ E + + F ++ + R++R P KG A+V F
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPQTMKSKGYAFVSF 143
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 87 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDP----------------- 125
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E L RLD R P+K + + P+ K
Sbjct: 126 NTGRSRGFGFILFKEPGSVEKVLE-------QKEHRLDGRLIDPKKAMAMKKDPV----K 174
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 175 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKTNKRRGFVFITFK 223
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDATSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 203
>gi|417409403|gb|JAA51208.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 292
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD GK+ FVG L K L F KFGE+ I+ P
Sbjct: 27 DDAGKM----FVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDP----------------- 65
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 66 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKEPV----K 114
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +EEI + F + +EA+ + P +G ++ FK
Sbjct: 115 KIFVGGLNPEATEEEIREYFGEFGE----IEAIDLPMDPKSHKRRGFVFITFK 163
>gi|349580766|dbj|GAA25925.1| K7_Nop13p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 403
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR + K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPR---VAAKNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFK 288
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 44.3 bits (103), Expect = 0.11, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 29/168 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + + + F GEI VR S + N
Sbjct: 877 TVFVTNFPPTADENYIRELFHSCGEIAEVRFPS------------------LKYNTHRRF 918
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F S AA N +GGN + + P ++ A Y+ + ++V NLP+
Sbjct: 919 CYVQFTSSSDAYAATGLNEKDLGGNLRLVVKISDPSQRQVRSGA--YEEGREIYVCNLPY 976
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTR 392
+ ++ +LF D+ES +R P G +G A+V F T+
Sbjct: 977 KTTEGDLVELFTAYGDVES-------VRIPTKVNGETRGFAFVTFATK 1017
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 203
>gi|256270769|gb|EEU05930.1| Nop13p [Saccharomyces cerevisiae JAY291]
Length = 403
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR + K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPR---VAAKNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFK 288
>gi|1302151|emb|CAA96066.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 403
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFK 288
>gi|396082305|gb|AFN83915.1| polyadenylate-binding protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 415
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 29/169 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFV NLP K L F FGEI S ++ + P + +
Sbjct: 13 IFVKNLPESFTSKDLDDAFSMFGEIVSCKVATTP------------------QGKSKGYG 54
Query: 288 YIVFKSEQSTEAALA----FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
++ FK +++ + + N ++GGN I ++ P K KGE + + F+ N
Sbjct: 55 FVQFKEKKAAKKVIKNFNNLNGLMLGGNKIAVELYNPDMK--KGESKKVSTMFTNCFIKN 112
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
P D ++E+ +L + S ++ P KG A+ F++
Sbjct: 113 FPVDTTEKELLELLVRYGKVTSLYFPIKDDGKP-----KGFAFANFESH 156
>gi|330443708|ref|NP_014224.2| Nop13p [Saccharomyces cerevisiae S288c]
gi|347595682|sp|P53883.2|NOP13_YEAST RecName: Full=Nucleolar protein 13
gi|151944364|gb|EDN62642.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
gi|190409156|gb|EDV12421.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|323331909|gb|EGA73321.1| Nop13p [Saccharomyces cerevisiae AWRI796]
gi|329138963|tpg|DAA10376.2| TPA: Nop13p [Saccharomyces cerevisiae S288c]
gi|392296819|gb|EIW07920.1| Nop13p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 403
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFK 288
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 28/168 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSVH 286
IFVG L V + L EF GE+ +R+ +D + R KG
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEV----VRASVQMDRQTGRSKG--------------F 434
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI----KKTVFV 341
Y+ F + ++ E A+A N I G + ++ A P G D K +FV
Sbjct: 435 GYVSFSTPEAAEKAIAEMNGKEIDGRAVNVNAATPKTPNPAGRAKQFGDTVSAESKVLFV 494
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
GN+ F+ ++ +++ F D+ S VR+ KG YV F
Sbjct: 495 GNVSFNANEDMLWETFGEHGDIVS----VRLPTDRETGQMKGFGYVEF 538
>gi|365763529|gb|EHN05057.1| Nop13p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 403
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFK 288
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 35/147 (23%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G DD+ R +FVG L + K L + F +GEI+S+ +++ P
Sbjct: 37 GRDDD----RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDP--------------- 77
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
N A+IVFK+ S + +A G+H ++ P KK K
Sbjct: 78 --NTGRSRGFAFIVFKAPDSIDKVMA------AGDHTINNKKVDP-KKAKARHG------ 122
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDL 363
+FVG L ++ D+EI F ++
Sbjct: 123 -KIFVGGLSSEISDDEIKNFFSNFGNI 148
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 87 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDP----------------- 125
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E L RLD R P+K + + P+ K
Sbjct: 126 NTGRSRGFGFILFKEPGSVEKVLE-------QKEHRLDGRLIDPKKAMAMKKDPV----K 174
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 175 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKTNKRRGFVFITFK 223
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 29/164 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK---GAILQKQINENADS 284
+FVGNLP V + L + F G ++ + I + + R G + + E +
Sbjct: 113 LFVGNLPFDVDSEKLAQIFEGAGVVEIAEV----IYNRETDRSRGFGFVTMSTVEEAEKA 168
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL-YDIKKTVFVGN 343
V Y F+ + G + +++A P + + E AP Y+ V+VGN
Sbjct: 169 VELYHKFE---------------VNGRFLTVNKAAP--RGSRPERAPREYEPSFRVYVGN 211
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
LP+DV D + Q+F V + RV+ +G A+V
Sbjct: 212 LPWDVDDARLEQVFSE----HGKVLSARVVSDRETGRSRGFAFV 251
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 26/170 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VG L V L E FGE+ S R++ + T +G
Sbjct: 215 IWVGQLSWNVDNDWLKSEMEVFGEVTSARVQ---LDRTSGKSRG--------------FG 257
Query: 288 YIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKK----TVFVG 342
Y+ F + + + A + G IR+D + P + D + T+F+G
Sbjct: 258 YVDFATAAAAKKAFDEGQGKEVDGRAIRIDLSTPKGDVTENRAKKFNDQRSAPSSTLFIG 317
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
NL FDV +++++ F V VR+ + P KG YV F +
Sbjct: 318 NLSFDVSEDDVWNAFS----EHGEVSGVRLPKDPDSGRPKGFGYVEFAAQ 363
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL V + + F + GE+ VR+ P D+ P+
Sbjct: 313 TLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDP--DSGRPKG---------------F 355
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F +++S +AA+ A + G +RLD + P
Sbjct: 356 GYVEFAAQESAQAAIDAMTGQELAGRPLRLDFSTP 390
>gi|340501460|gb|EGR28246.1| hypothetical protein IMG5_180460 [Ichthyophthirius multifiliis]
Length = 861
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 36/168 (21%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++T+F+ NLP ++ + F I S+RI K +KG
Sbjct: 510 IQTVFIKNLPTHYSEQEINNLFENQQNIKSIRI-------VKKGKKGL------------ 550
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVIGGNHI-RLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
AYI F +++ E A N I NHI + + PP++K + +I T+F+
Sbjct: 551 --AYIDFLNQEEAEKACKQANNLKIDDNHILYVALSAPPKEKKE-------EINLTLFLN 601
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
NLPF++K+EEI + F + ++ +R+I+ + +G +Y+ F+
Sbjct: 602 NLPFEIKEEEIQKQFQDI-----QIKEIRIIKDDK-GLCRGYSYIEFQ 643
>gi|115398692|ref|XP_001214935.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191818|gb|EAU33518.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1291
Score = 44.3 bits (103), Expect = 0.12, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 31/169 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P +K + F +FGE IID + P + N
Sbjct: 901 TLFVTNFPPTADEKYIRDLFHEFGE----------IIDIRFP--------SLKYNTHRRF 942
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGN-HIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ ++ + A + V+G N H+ + P RK + P+Y+ + + V N+
Sbjct: 943 CYVQFKTGEAAQNATKLDGTVVGNNLHLVAKISDPSRK--QDRHGPMYE-GREIHVSNVD 999
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTR 392
+ ++++ +LF S V ++R P G KG YV+F T+
Sbjct: 1000 WKANEDDLKELF-------SKYGHVELVRIPRKVDGGSKGFGYVVFSTK 1041
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 32/200 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK D+ET +K + D + +FVGNL V + L EF +FGE+ VR+
Sbjct: 232 KRKAEDDETP---AAKKSKVADVDTSKGPNLFVGNLSWNVDENWLRSEFEEFGELSGVRL 288
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLD 316
+ D + R Y+ F + + +A A A + G + +D
Sbjct: 289 ----MTDRQTGRSKGF-------------GYVEFVDAADAAKAYAAKQGAELDGRPLNVD 331
Query: 317 RAC-------PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
A P + K L + T+F+GNL FD E++ + F +V
Sbjct: 332 FANARSNDNKPADNRRKSYGDQLGEPTDTLFLGNLSFDCTQEDVSEAFA----PHGTVMG 387
Query: 370 VRVIRHPHMRVGKGIAYVLF 389
+R+ KG YV F
Sbjct: 388 IRLPTDRETGAPKGFGYVTF 407
>gi|259149184|emb|CAY82426.1| Nop13p [Saccharomyces cerevisiae EC1118]
Length = 403
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFK 288
>gi|353243433|emb|CCA74974.1| related to RNA-binding protein rnp24 [Piriformospora indica DSM
11827]
Length = 390
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 41/203 (20%)
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
E + ++VGNL K +L KEF + +RI +P + G + N+
Sbjct: 61 ENRSAHCVWVGNLSFKTTPASL-KEFFTDEKEAIIRIH-MPTKALHGTKPGQKTARVDNK 118
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKK--LKGEDAPLYD 334
AY+ F + + ++A+A + ++ G + + D A P K K APL
Sbjct: 119 G----FAYVDFATPGAKDSAIARSEGILDGRRLLIKDGSDFAGRPEKDGVSKASSAPLTG 174
Query: 335 IKKT---------------VFVGNLPFDVKDEEIYQLFCGLN-DLESSVEAV--RVIRHP 376
+ KT +F+GNL F+ K+EEI LF ++ L+ E++ R++R
Sbjct: 175 MTKTARKILSQQKNEACPTLFIGNLSFETKEEEIAALFGRVHPKLKKEGESIEDRLLR-- 232
Query: 377 HMRVG--------KGIAYVLFKT 391
+R+G KG A+V FKT
Sbjct: 233 -VRMGTFEDSGKCKGFAFVDFKT 254
>gi|403290028|ref|XP_003936135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Saimiri
boliviensis boliviensis]
Length = 260
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 93 EATEEKIREYFGDFGE----IEAIELPMDPKLNKRRGFVFITFK 132
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F GNL V ++ L EF +FGE+ RI + D + R + D+V A
Sbjct: 240 LFAGNLSWNVDEEWLRSEFEEFGELVGTRI----VTDRESGRSRGFGYVEFANVEDAVKA 295
Query: 288 YIVFKSEQ--STEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ K + + L F A GN +RA K + +P D T+F+GN+
Sbjct: 296 HAAKKDVELDGRKLNLDFANARANGNANPRERADNRAKSFGDQTSPESD---TLFIGNIS 352
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
F + + +LF S++ +R+ P KG YV F +
Sbjct: 353 FSADESMVQELFSKYG----SIQGIRLPTDPESGRPKGFGYVQFSS 394
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 80/205 (39%), Gaps = 36/205 (17%)
Query: 197 EKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
+KRK D+E ++ +K + EG L FVGNL V ++ L EF +FGE+ VR
Sbjct: 237 QKRKAEDDE--ELAAPKKTKVESSEGGNL---FVGNLSWNVDEEWLRSEFEEFGELSGVR 291
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRL 315
I + D R Y+ F + A A V + G + +
Sbjct: 292 I----VTDRDSGRSRGF-------------GYVEFVNAADAAKAHAAKKDVELDGRKLNI 334
Query: 316 DRA-----CPPRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D A PR++ + D T+F+GN+ F + I + F S
Sbjct: 335 DFANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFSADENMISEAFS----EHGS 390
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKT 391
+ VR+ P KG YV F +
Sbjct: 391 ILGVRLPTDPESGRPKGFGYVQFSS 415
>gi|431916162|gb|ELK16414.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Pteropus
alecto]
Length = 425
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 26/140 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 199 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG--------------FG 241
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+++FK S + L + G I RA K LKG++ P K VFVG L D
Sbjct: 242 FVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKVFVGGLSPD 292
Query: 348 VKDEEIYQLFCGLNDLESSV 367
+E+I + F + E V
Sbjct: 293 TSEEQIKEYFGAFGECEIKV 312
>gi|12847801|dbj|BAB27715.1| unnamed protein product [Mus musculus]
Length = 148
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 27 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 66
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 67 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 116
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 117 FVGGLSPDTSEEQIKEYFGAFGEIEN 142
>gi|452982819|gb|EME82577.1| hypothetical protein MYCFIDRAFT_215010 [Pseudocercospora fijiensis
CIRAD86]
Length = 440
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 31/174 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV--PIIDTKIPRKGAILQKQINENADSV 285
I++GNL K K L K + G ID I V P+ D KQ N+
Sbjct: 100 IWIGNLSFKTTKDALRKFLLDRGGIDESSITRVHLPMND-----------KQQNKG---- 144
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA----CPPRKKLKGEDAPLYDI------ 335
AYI F SE AL + ++ G + + A P K +DA +
Sbjct: 145 FAYIDFNSEVVLNIALTLSENLVDGRKVLIKNAKSFEGRPEKTKADKDAAENGVVSKKPA 204
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
K VFVGNL FD+ +E+ + F VE V + KG +V F
Sbjct: 205 SKRVFVGNLGFDMTRDELAEHFAQA----GQVEDVFLATFEDTGKCKGFGWVTF 254
>gi|207341820|gb|EDZ69768.1| YNL175Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 315
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFK 288
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 29/165 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V ++ L F + G + +I I E +
Sbjct: 8 RTLYVGNLDSSVSEELLCALFSQIGAVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + Q AL A N ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQCAATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ + + + F ++ + R++R P KG A+V F
Sbjct: 104 SPEIETQTLKEAFAPFGEISN----CRIVRDPQTMKSKGYAFVSF 144
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 49/184 (26%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP---QTMKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC------------------PPRKKLKGE 328
++ F + EAA+ A N +G IR + + P +++ +
Sbjct: 141 FVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQ 200
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+P TV+ G + DE I + F +++ +RV + KG A++
Sbjct: 201 SSP---TNCTVYCGGFTNGITDELINKTFSPF----GTIQDIRVFKD------KGYAFIK 247
Query: 389 FKTR 392
F T+
Sbjct: 248 FTTK 251
>gi|426221705|ref|XP_004023200.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Ovis aries]
Length = 724
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 364 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 416
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 417 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 452
>gi|5929884|gb|AAD56625.1|AF151373_1 nucleolin-related protein NRP [Rattus norvegicus]
Length = 715
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 355 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 407
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 408 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 443
>gi|345790650|ref|XP_850477.2| PREDICTED: nucleolin isoform 1 [Canis lupus familiaris]
Length = 715
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 355 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 407
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 408 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 443
>gi|149521754|ref|XP_001512512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Ornithorhynchus anatinus]
gi|338723434|ref|XP_003364726.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Equus
caballus]
gi|426231939|ref|XP_004009994.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Ovis
aries]
gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [Homo sapiens]
Length = 271
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+G L KK L + +FGE+ I++ P+
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT-----------------GRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+++FK S + L + G I RA K LKG++ P K VFVG L D
Sbjct: 44 FVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKVFVGGLSPD 94
Query: 348 VKDEEIYQLFCGLNDLES 365
+E+I + F ++E+
Sbjct: 95 TSEEQIKEYFGAFGEIEN 112
>gi|331284195|ref|NP_001193589.1| nucleolin [Bos taurus]
gi|296490214|tpg|DAA32327.1| TPA: nucleolin [Bos taurus]
Length = 720
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 360 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 412
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 413 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 448
>gi|47229364|emb|CAF99352.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 49/193 (25%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ--------- 277
T++VG L KV + L + F++ G P+++T +P+ Q Q
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQGEQLFHTDN 63
Query: 278 ------------INENADSVH------AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRA 318
+ N +VH ++ F SE+ + A+ NM + G IR+++A
Sbjct: 64 TEDACVRFQKRLLYVNETNVHILFSGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKA 123
Query: 319 CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHM 378
K L D+ +F+GNL ++ ++ +Y F + ++ +++R P
Sbjct: 124 SAHNKNL--------DVGANIFIGNLDPEIDEKLLYDTFSAFGVI---LQTPKIMRDPDT 172
Query: 379 RVGKGIAYVLFKT 391
KG A++ F +
Sbjct: 173 GNSKGYAFINFAS 185
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 28/172 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L EF G + S R+ I +G + +
Sbjct: 212 TIFVGRLSWSIDDEWLKTEFEHIGGVISARV---------IYERGTERSRG--------Y 254
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACP-PRKKLKGEDAPLY-DIKK----TV 339
Y+ F+ + E A+ I G I +D + P K + A + D+ T+
Sbjct: 255 GYVDFEDKSYAEKAIKEMQGKEIDGRPINVDMSTSKPASNPKEDRAKKFGDVPSQPSDTL 314
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
F+GNL F+ + I++LF S+ +VR+ HP KG YV + +
Sbjct: 315 FLGNLSFNADRDNIFELFKDYG----SIISVRIPTHPETNQPKGFGYVQYAS 362
>gi|440913256|gb|ELR62731.1| Nucleolin, partial [Bos grunniens mutus]
Length = 714
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 354 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 406
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 407 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 442
>gi|358369062|dbj|GAA85677.1| RNA binding protein Rnp24 [Aspergillus kawachii IFO 4308]
Length = 371
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEF---IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNLP K + K F F + RI +P+ G K N+
Sbjct: 75 VWIGNLPFFATKDDVRKFFTTNCSFADTTITRIH--------MPKSGDKHGKAQNKG--- 123
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKLKGEDAPLYDIK--- 336
AY+ F ++++++ A+ + ++ G + + A P + K +G++A
Sbjct: 124 -FAYVDFSTQKASQEAMGLSEQLLSGRRVLIKDAKNFSGRPEKPKGEGQNASSGAASGNP 182
Query: 337 --KTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
K +FVGNL FD E I + F CG ++ V V KG A+V+F
Sbjct: 183 PSKRIFVGNLGFDATKELIEEHFSQCG------TIANVHVATFQDSGKCKGYAWVVF 233
>gi|297676866|ref|XP_002816343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pongo
abelii]
Length = 259
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 93 EATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 132
>gi|345777448|ref|XP_003431598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Canis lupus
familiaris]
Length = 353
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 33/167 (19%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
LR +FVG L KK L F KFGE+ I+ P N
Sbjct: 119 LRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSR 161
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGN 343
+I+FK S E V+ RLD R P+K + + P+ K +FVG
Sbjct: 162 GFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGG 210
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 211 LNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 253
>gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus]
Length = 298
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 85 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 123
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 124 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 172
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 173 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFK 221
>gi|224141287|ref|XP_002324006.1| predicted protein [Populus trichocarpa]
gi|222867008|gb|EEF04139.1| predicted protein [Populus trichocarpa]
Length = 964
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 35/181 (19%)
Query: 150 NFSVEGKKRSENKKTKKRKRDDVEKDYV-------EKKYGVIAK----EEEGKKVGVGEK 198
N SV GK R+ N + +++ D+ + ++ G +A +GK++ +
Sbjct: 392 NSSVWGKVRASNNRLHVKEKTDLTVSMLNNMESESKENQGALANVRGTSRQGKQINFEDS 451
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKFGEIDSVRI 257
K + + K LRT+FV +P K K++ L+ F KFGE+
Sbjct: 452 SAKTIDSPAKTQSNTMRHTPKPSQKALRTLFVNGIPQKSNKREALLSHFQKFGEV----- 506
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
ID IP ++ A++ F + EAAL AV+G IRL
Sbjct: 507 -----IDIYIP-------------LNTERAFVQFSKREEAEAALRAPDAVMGNRFIRLWW 548
Query: 318 A 318
A
Sbjct: 549 A 549
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 83 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 121
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 122 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 170
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 171 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 219
>gi|242025582|ref|XP_002433203.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518744|gb|EEB20465.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 272
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 39/144 (27%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G DD+ KL FVG LP +K L + F KFG I+S+ I+ PI TK+PR
Sbjct: 16 GKDDDKKL----FVGGLPKLCGEKELNETFSKFGTIESINIKKDPI--TKVPRG------ 63
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHI---RLDRACPPRKKLKGEDAPLY 333
+IVF + L+ + G + R+ + PP K
Sbjct: 64 ---------FCFIVFSDPNVVDQILSSGDICVNGKKVDPRRVTKTTPPGK---------- 104
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLF 357
+F+G L D +E+I + F
Sbjct: 105 -----IFIGGLTTDFTEEKIKEHF 123
>gi|195998405|ref|XP_002109071.1| hypothetical protein TRIADDRAFT_35408 [Trichoplax adhaerens]
gi|190589847|gb|EDV29869.1| hypothetical protein TRIADDRAFT_35408, partial [Trichoplax
adhaerens]
Length = 216
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+ TV+V NLPF + + +I++LFC + V ++++ R KG+A++LF R
Sbjct: 9 RSTVYVSNLPFSMTNNDIHKLFCK----HGKIVKVTIMKNKETRESKGVAFILFLER 61
>gi|354497787|ref|XP_003511000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Cricetulus griseus]
gi|344249844|gb|EGW05948.1| Heterogeneous nuclear ribonucleoprotein D-like [Cricetulus griseus]
Length = 271
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+G L KK L + +FGE+ I++ P+
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT-----------------GRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+++FK S + L + G I RA K LKG++ P K VFVG L D
Sbjct: 44 FVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKVFVGGLSPD 94
Query: 348 VKDEEIYQLFCGLNDLES 365
+E+I + F ++E+
Sbjct: 95 TSEEQIKEYFGAFGEIEN 112
>gi|301764124|ref|XP_002917484.1| PREDICTED: nucleolin-like [Ailuropoda melanoleuca]
Length = 717
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 357 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 409
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 410 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 445
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 36/205 (17%)
Query: 197 EKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
+KRK D+E ++ +K + EG L FVGNL V ++ L EF +FGE+ VR
Sbjct: 235 QKRKAEDDE--ELAAPKKTKVESSEGGNL---FVGNLSWNVDEEWLRSEFEEFGELSGVR 289
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRL 315
I + D R Y+ F A A V + G + +
Sbjct: 290 I----VTDRDSGRSRGF-------------GYVEFVDAADAAKAHAAKKDVELDGRKLNI 332
Query: 316 DRA-----CPPRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D A PR++ + D T+F+GN+ F + I + F S
Sbjct: 333 DFANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFSADENMISEAFS----EHGS 388
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKT 391
+ VR+ P KG YV F +
Sbjct: 389 ILGVRLPTDPESGRPKGFGYVQFSS 413
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 37/169 (21%)
Query: 227 TIFVGNLPLKVKK----KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
T+FVGNL + K KT ++EF FG+ +++ ++D +I +A
Sbjct: 280 TMFVGNL-VSAKDFEELKTGLREF--FGK------KNIEVLDVRI-------------SA 317
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
Y+ F S + + AL N + G ++L++A K+ E+ D + T+F+
Sbjct: 318 TRRFGYVDFSSAEDLDKALQMNGKKLMGVEVKLEKAK--SKETMKENKKERDAR-TLFLK 374
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
NLP+ + +++I ++F E+++E VR++ + +G+AYV FKT
Sbjct: 375 NLPYRITEDDIREVF------ENALE-VRIVMNKDGN-SRGMAYVEFKT 415
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 2 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 44
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 45 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 93
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 94 EATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 133
>gi|281349809|gb|EFB25393.1| hypothetical protein PANDA_005719 [Ailuropoda melanoleuca]
Length = 645
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 313 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 365
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 366 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 401
>gi|365758792|gb|EHN00619.1| Nop13p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 400
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL + K L++ FI + E + R+ I +PR A K N +
Sbjct: 124 VWIGNLSFETTKDDLVRFFIAKTRDNEEEKSRVNEKDITRLSMPRVAA---KNSNSMKNK 180
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + P + L ++ P +
Sbjct: 181 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 236
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FDV D+ + + F CG V +R+ KG A++ FK
Sbjct: 237 ILFVGNLSFDVTDDLLRKHFQHCG------DVVKIRMATFEDSGKCKGFAFIDFK 285
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 34/204 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E E K E +D G + +FVGNL + + L +EF +FGEI R+
Sbjct: 167 KKRKADDEEETAAKKSKTE-VEDTGS--KNLFVGNLSWNIDDEWLYREFEEFGEITGARV 223
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLD 316
I D + R Y+ F S + A A A+I G +D
Sbjct: 224 ----ISDRESGRSKGF-------------GYVEFANSADAAAALKAKKGALIDGREANVD 266
Query: 317 RACP-----PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESSV 367
+ P P+ + D K T+FVGN+ F+ ++ + + F +V
Sbjct: 267 FSTPRDNAAPKDRANARAQTYGDAKNPESDTLFVGNISFEANEDMLGEAFG----AHGTV 322
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKT 391
VR+ KG Y+ F +
Sbjct: 323 VNVRLPTDMDSGNPKGFGYITFSS 346
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 65/166 (39%), Gaps = 33/166 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L KK L F KFGE+ I+ P N
Sbjct: 54 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRG 96
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 97 FGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGL 145
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P +G ++ FK
Sbjct: 146 NPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 187
>gi|149016335|gb|EDL75581.1| nucleolin, isoform CRA_e [Rattus norvegicus]
Length = 505
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 146 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 198
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E +VE +R++ KGIAY+ FK+
Sbjct: 199 NITEDELKEVF------EDAVE-IRLVSQDGR--SKGIAYIEFKS 234
>gi|149016333|gb|EDL75579.1| nucleolin, isoform CRA_d [Rattus norvegicus]
gi|149016334|gb|EDL75580.1| nucleolin, isoform CRA_d [Rattus norvegicus]
Length = 496
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 137 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 189
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E +VE +R++ KGIAY+ FK+
Sbjct: 190 NITEDELKEVF------EDAVE-IRLVSQDGR--SKGIAYIEFKS 225
>gi|112180524|gb|AAH50513.2| Hnrpa0l protein [Danio rerio]
Length = 302
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 26/166 (15%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEI-DSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
L +FVG L ++ + L F ++G++ D V + + P+ ++
Sbjct: 5 LCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSR----------------- 47
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
++ + S + +AA++ ++ GN++ L RA ++ G+ L +KK +FVG
Sbjct: 48 -CFGFVTYSSTEEADAAMSARPHIVDGNNVDLKRAVA--REDAGKPEMLAKVKK-IFVGG 103
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
L D++DE + F +E +VI +G +V F
Sbjct: 104 LKDDIEDEHLQDYFSQF----GPIEKAQVITDKDTGKKRGFGFVYF 145
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 41/169 (24%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++G+I+S+ +++ P N
Sbjct: 40 RKLFVGGLSWETSDKELKEHFGQYGDIESINVKTDP-----------------NTGRSRG 82
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 83 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 128
Query: 346 FDVKDEEI---YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ D+EI + F + D+E + + R KG ++ F +
Sbjct: 129 TEISDDEIKTFFGQFGNIVDVEMPFDKQKNQR-------KGFCFITFDS 170
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 327 GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
G+ AP+ D + +FVG L ++ D+E+ + F D+ES + V P+ +G A+
Sbjct: 30 GDSAPVRDDDRKLFVGGLSWETSDKELKEHFGQYGDIES----INVKTDPNTGRSRGFAF 85
Query: 387 VLFKT 391
+++K+
Sbjct: 86 IVYKS 90
>gi|149016338|gb|EDL75584.1| nucleolin, isoform CRA_h [Rattus norvegicus]
Length = 397
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 137 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 189
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E +VE +R++ KGIAY+ FK+
Sbjct: 190 NITEDELKEVF------EDAVE-IRLVSQDGR--SKGIAYIEFKS 225
>gi|148235301|ref|NP_001084608.1| heterogeneous nuclear ribonucleoprotein D-like-B [Xenopus laevis]
gi|82237179|sp|Q6NU14.1|HNDLB_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-B;
Short=hnRNP D-like B; Short=hnRNP DL-B
gi|46249880|gb|AAH68788.1| MGC81335 protein [Xenopus laevis]
Length = 291
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 27/143 (18%)
Query: 224 LLRT-IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
L+R+ +F+G L KK L + +FGE+ I++ P+
Sbjct: 31 LIRSKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVT-----------------GR 73
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
+++FK S + L + G I RA K L+G++ P K VFVG
Sbjct: 74 SRGFGFVLFKDAVSVDKVLETKEHKLDGKLIDPKRA----KALQGKEPP-----KKVFVG 124
Query: 343 NLPFDVKDEEIYQLFCGLNDLES 365
L + +E+I Q F G ++E+
Sbjct: 125 GLSPETTEEQIKQYFGGFGEIEN 147
>gi|365987429|ref|XP_003670546.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
gi|343769316|emb|CCD25303.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
Length = 323
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 189 EGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIK 248
E +V +G K + + E D ++ D RTIFVG LP + + L K F+K
Sbjct: 76 ENNEVVLGNKIAQENKEALDKWNPHEDPNIKDTDPY-RTIFVGRLPYDIDELQLQKHFLK 134
Query: 249 FGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL 301
FG+I+ +R I++ + N N + +IVF S++ A
Sbjct: 135 FGQIEKIR----------------IVRDKFNNNKSKGYGFIVFHDPISSKMAC 171
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 37/163 (22%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+V NL +++K+ L F +FG+I +R+++ RK A
Sbjct: 699 IYVSNLSPQMQKRQLRHIFSEFGKIREIRLQN---------RKTMAF------------A 737
Query: 288 YIVFKSEQSTEAALAFNMAVI---GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
YI F+ E+ +L N AVI G I + + P KK++ + LY V NL
Sbjct: 738 YIDFEKEEDAIKSLKMNQAVIEKTGDRKIGVAIS-DPTKKMQIDHKKLY-------VSNL 789
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
+ ++++ +LF + + A+RV+R P+ KGIA+V
Sbjct: 790 SHTMTEDDLQELFSKFGE----ISALRVVRMPNGN-SKGIAFV 827
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 93 EATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 132
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 41 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 79
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 80 NTGRSRGFGFILFKDATSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 128
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ FK
Sbjct: 129 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 177
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 41/169 (24%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L F FG+I+S+ +++ P T +G
Sbjct: 56 RKLFVGGLSWETTDKELRDHFSTFGDIESINVKTDP---TTGRSRG-------------- 98
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF +S + A+A G+HI ++ P KK K +FVG L
Sbjct: 99 FAFIVFAKAESLDKAMAH------GDHIINNKKVDP-KKAKARHGK-------IFVGGLS 144
Query: 346 FDVKDEEI---YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ D++I + F + D+E + + R KG ++ F++
Sbjct: 145 TELSDDDIKTFFSQFGTIVDVEMPFDKTKNQR-------KGFCFITFES 186
>gi|396472554|ref|XP_003839148.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
gi|312215717|emb|CBX95669.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
Length = 379
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 28/138 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+++GNL +V L + F +FGEI++V+I I D + +G
Sbjct: 192 RTLYIGNLYYEVTADQLQRVFSRFGEIENVKI----IYDNRGLSRG-------------- 233
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNH--IRLDRACP---PRKKLKGEDAPLYDIKKTV 339
Y+ FK+ + A+ +M V G + ++ R P + ++P KT+
Sbjct: 234 FGYVEFKNIPDAQTAIDNLDMQVFEGRNLVVQFHREKPGFGKNNRANSTNSP----SKTL 289
Query: 340 FVGNLPFDVKDEEIYQLF 357
F+GN+ F++ D+++ LF
Sbjct: 290 FIGNMSFEMSDKDLNDLF 307
>gi|397467431|ref|XP_003805422.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
paniscus]
Length = 261
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 93 EATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 132
>gi|410969636|ref|XP_003991299.1| PREDICTED: nucleolin [Felis catus]
Length = 715
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 355 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 407
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 408 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 443
>gi|67471742|ref|XP_651783.1| enhancer binding protein-1 [Entamoeba histolytica HM-1:IMSS]
gi|56468563|gb|EAL46397.1| enhancer binding protein-1 [Entamoeba histolytica HM-1:IMSS]
gi|449709038|gb|EMD48384.1| enhancer binding protein, putative [Entamoeba histolytica KU27]
Length = 306
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 31/189 (16%)
Query: 210 LVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR 269
LV R E D+ +F+ NLP + ++ L + F KFG ++ + +I T
Sbjct: 103 LVKRTNEVTDN------MLFIKNLPFAITEEKLKEMFSKFGVVE------ITLIKTH--- 147
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRA---CPPRKKL 325
+K+ N ++ A+I K+ + + A+A N + G I + A ++
Sbjct: 148 -----RKKGNVTKNNGIAFITVKTAEEQKKAIAEMNNFEVEGRKITVAAAYKKVENKQTT 202
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHP---HMRVGK 382
K + P + VFV NLPF + DE +LF + +E+++ V RH ++ K
Sbjct: 203 KKTNEPKSLSETNVFVKNLPFTLTDEGFKKLFEKYDVVEATI----VKRHNKKLNVDRSK 258
Query: 383 GIAYVLFKT 391
G +V FKT
Sbjct: 259 GYGFVTFKT 267
>gi|125527839|gb|EAY75953.1| hypothetical protein OsI_03870 [Oryza sativa Indica Group]
Length = 312
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R IFVG LP+ +K L + F KFGE++ + V ++TK+PR
Sbjct: 124 RKIFVGGLPVSATEKKLKEYFSKFGEVNHAIV--VTDLNTKMPRG--------------- 166
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-------KLKGEDAPLY 333
+I F SE+ST AL + + G + + A P ++ KL + P Y
Sbjct: 167 FGFIQFASEESTARALKKDRHFLCGQWVEVSLAMPKQQNAASGTSKLSVQARPFY 221
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 29/174 (16%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D K RT FV NL + + + + F K GE+ +R+ V I K KG
Sbjct: 766 DPDKSRRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRL--VKTIKGK--SKG-------- 813
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT- 338
+AY+ FK E AL + I G + + + C R + K + ++K
Sbjct: 814 ------YAYVEFKDELGVLEALKLDRTPIEGRPMFVSK-CEDRSQKKAQFKFSTAMEKNK 866
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFK 390
+F+ NLPF + + Q+F S V+ +R R G KG+AYV F+
Sbjct: 867 LFIKNLPFTCSKDALIQIF-------SEHGPVKEVRMVTYRSGAPKGLAYVEFE 913
>gi|335309939|ref|XP_003133770.2| PREDICTED: nucleolin-like [Sus scrofa]
Length = 724
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 363 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 415
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E +VE +R++ KGIAY+ FKT
Sbjct: 416 KVTQDELKEVF------EDAVE-IRLVSKDGKS--KGIAYIEFKT 451
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 66 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 104
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 105 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 153
Query: 338 TVFVGNL-PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L P +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 154 KIFVGGLNPESPTEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 203
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 16/197 (8%)
Query: 197 EKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
+K++KA+ E E + K+ D +FVGNL V ++ L EF +FGE+ R
Sbjct: 212 QKKRKAEEEAEPVA---KKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTR 268
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQ--STEAALAFNMAVIGGNHIR 314
I + D + R + D+V A+ K + + L + A GN
Sbjct: 269 I----VTDRESGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANP 324
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIR 374
+RA K + +P D T+F+GN+ F + + +LF +++ +R+
Sbjct: 325 RERADNRAKSFGDQTSPESD---TLFIGNISFSADENMVQELFSKYG----TIQGIRLPT 377
Query: 375 HPHMRVGKGIAYVLFKT 391
P KG YV F +
Sbjct: 378 DPDSGRPKGFGYVQFSS 394
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ + + + F K+G I +R+ + P D+ P+
Sbjct: 345 TLFIGNISFSADENMVQELFSKYGTIQGIRLPTDP--DSGRPKG---------------F 387
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S AAL A N A +GG IRLD + P
Sbjct: 388 GYVQFSSVDEARAALEAENGADLGGRSIRLDFSTP 422
>gi|149016336|gb|EDL75582.1| nucleolin, isoform CRA_f [Rattus norvegicus]
Length = 408
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 137 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 189
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E +VE +R++ KGIAY+ FK+
Sbjct: 190 NITEDELKEVF------EDAVE-IRLVSQDGR--SKGIAYIEFKS 225
>gi|361126860|gb|EHK98846.1| putative Nucleolar protein 12 [Glarea lozoyensis 74030]
Length = 649
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 80/200 (40%), Gaps = 60/200 (30%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF-------------GEIDSVRIRSVPIID 264
K RT+F+ N+ K KKTL+ F +++S+R RS
Sbjct: 222 KATRTVFLANVSTEAISSKSAKKTLMAHMGSFLDSLPDPPEGKPAHKVESLRFRSTAYAG 281
Query: 265 TK-IPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK 323
+P+K A ++K + AY + EA N ++ H+R+D P K
Sbjct: 282 GGGLPKKAAFVKKDL-------MAYA------AREAVKRLNGTMVLDRHLRVDGVAHPAK 328
Query: 324 KLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGL--------NDLE----------S 365
D ++ VFVGNL F V DE + +D+E
Sbjct: 329 ---------TDHRRCVFVGNLGF-VDDESLLDQGGETERKRSKIPSDIEEGLWRQFGKAG 378
Query: 366 SVEAVRVIRHPHMRVGKGIA 385
+VE+VRV+R RVGKG A
Sbjct: 379 TVESVRVVRDEKTRVGKGFA 398
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 16/197 (8%)
Query: 197 EKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
+K++KA+ E E + K+ D +FVGNL V ++ L EF +FGE+ R
Sbjct: 212 QKKRKAEEEAEPVA---KKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTR 268
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQ--STEAALAFNMAVIGGNHIR 314
I + D + R + D+V A+ K + + L + A GN
Sbjct: 269 I----VTDRESGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANP 324
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIR 374
+RA K + +P D T+F+GN+ F + + +LF +++ +R+
Sbjct: 325 RERADNRAKSFGDQTSPESD---TLFIGNISFSADENMVQELFSKYG----TIQGIRLPT 377
Query: 375 HPHMRVGKGIAYVLFKT 391
P KG YV F +
Sbjct: 378 DPDSGRPKGFGYVQFSS 394
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 30/173 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + + L +EF G + + R+ + ++ + + +
Sbjct: 177 TVFVGRLSWSIDDEWLKQEFEHIGGVVAARV---------------MYERGTDRSRG--Y 219
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-----PR--KKLKGEDAPLYDIKKT 338
Y+ F+ + E A+ + I G I +D + PR ++ + D P + T
Sbjct: 220 GYVDFEDKSYAEKAVKEMHGKEIDGRPINVDMSTSKPTVNPREDRQKRFGDIPS-EPSDT 278
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+F+GNL F+ + IY++F ++ S VR+ HP KG YV + +
Sbjct: 279 LFLGNLSFNADRDNIYEIFGKFGEIIS----VRIPTHPETEQPKGFGYVQYTS 327
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 34/175 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + L +EF G + R+ I+++ ++ +
Sbjct: 216 TLFVGRLSWNIDDDWLKREFEHIGGVIGARV---------------IMERATGKSRG--Y 258
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGED---------APLYDIK 336
Y+ F+ + E ALA I G I LD + K D +P D
Sbjct: 259 GYVDFEGKSFAEKALAEMQGKEIDGRPINLDMSTGKPHASKSNDRAKQFGDSQSPPSD-- 316
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+F+GNL F+ + ++ F + V + R+ HP + KG YV F +
Sbjct: 317 -TLFIGNLSFNANRDGLFNTFGEYGN----VISCRIPTHPDTQQPKGFGYVQFSS 366
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + L F ++G + S RI + P DT+ P+
Sbjct: 317 TLFIGNLSFNANRDGLFNTFGEYGNVISCRIPTHP--DTQQPKG---------------F 359
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S +AAL A N I G RLD + P
Sbjct: 360 GYVQFSSVDEAKAALEALNGQYIEGRPCRLDFSAP 394
>gi|384490131|gb|EIE81353.1| hypothetical protein RO3G_06058 [Rhizopus delemar RA 99-880]
Length = 423
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G + TI+ G L + + + F GEI VRIR + +N
Sbjct: 196 GSDVYTIWCGGLNYQSTADDVREFFGSCGEIKDVRIR---------------MDDATGKN 240
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA-CPPRKKLKGEDAPLYDIKKTVF 340
H + F +++ EAALA + G IRLD A R+++K E++ K VF
Sbjct: 241 RGFCH--VDFATQEGKEAALAMSGNEFMGRKIRLDGADGSTRQRVKKEESYSSATSK-VF 297
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEA-VRVIRHPHMR-VG--KGIAYVLFKTR 392
+ NL D DE+ ++ L + S V IR P+ R G KGI Y+ F+T+
Sbjct: 298 IANLNHD-HDEQSHR--AALTEAFSQFGTIVGDIRLPYNRETGGLKGIGYIEFETK 350
>gi|156050581|ref|XP_001591252.1| hypothetical protein SS1G_07878 [Sclerotinia sclerotiorum 1980]
gi|154692278|gb|EDN92016.1| hypothetical protein SS1G_07878 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 376
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I++GNL + ++ L KEF FG I VR+ D + KG A
Sbjct: 148 IYIGNLLFDITEEDLKKEFEHFGTITDVRVTR----DARGLSKG--------------FA 189
Query: 288 YIVFKSEQSTEAALAF-NMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
YI F QS AA+ N + G + ++ K++ ++ P K +F+GNL F
Sbjct: 190 YIDFADVQSATAAIEEKNQTIFEGRRLIVNY-VNQTPKIRDQNPP----SKCLFIGNLAF 244
Query: 347 DVKDEEIYQLF 357
++ D ++ LF
Sbjct: 245 EMSDADLNSLF 255
>gi|223646910|gb|ACN10213.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
gi|223672773|gb|ACN12568.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 37/175 (21%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G DD GK+ FVG L KK L F KFGE+ I+ +D+ R
Sbjct: 77 GEDDAGKM----FVGGLSWDTSKKDLKDYFSKFGEVTDCTIK----MDSNTGRSRGF--- 125
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDI 335
+I+FK S + L RLD R P+K + + P
Sbjct: 126 ----------GFILFKEAGSVDKVLE-------QKEHRLDGRQIDPKKAMAMKKEPA--- 165
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
K +FVG L + +E I + F ++ES + + P + +G ++ FK
Sbjct: 166 -KKIFVGGLNPEATEETIREYFGTFGEIES----IELPVDPKFKKRRGFIFITFK 215
>gi|327281621|ref|XP_003225545.1| PREDICTED: nucleolin-like [Anolis carolinensis]
Length = 696
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FV NLP V K+ L +EF ++V +R V R G N+ +
Sbjct: 373 RTLFVKNLPFSVSKEDLQEEF-----DNAVEVRLV-------SRDG---------NSKGM 411
Query: 286 HAYIVFKSEQSTEAALAFNMAV-IGGNHIRLDRACPPRKK--LKGEDAPLYDIKKTVFVG 342
AYI FKSE E L + + G I +D ++ KG D KT+ V
Sbjct: 412 -AYIEFKSEAEAEKTLEEKQGLEMSGRAIVIDYTGEKSQQDTRKGGKGGQSD-SKTLVVN 469
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
NL +D +E + ++F E IR P G KG A+V F T
Sbjct: 470 NLSYDATEESLQEVF----------EKASAIRIPQNNQGRPKGFAFVDFAT 510
>gi|149016331|gb|EDL75577.1| nucleolin, isoform CRA_b [Rattus norvegicus]
Length = 698
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 339 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 391
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E +VE +R++ KGIAY+ FK+
Sbjct: 392 NITEDELKEVF------EDAVE-IRLVSQDGRS--KGIAYIEFKS 427
>gi|259486843|tpe|CBF85030.1| TPA: nucleic acid-binding protein (AFU_orthologue; AFUA_8G05260)
[Aspergillus nidulans FGSC A4]
Length = 450
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+F+GNL V + L K+ K+G ++ V I I D++ KG
Sbjct: 271 QTVFIGNLFYDVTAEDLKKQMAKYGVVEGVNI----IYDSRGISKG-------------- 312
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ Y+ F S + A+ A +M + G + L A P T+++GN+
Sbjct: 313 YGYVQFSSNAAARRAIDAMHMRIFEGRRVTLYYAQTNITNSFKNKKP----TNTLYIGNV 368
Query: 345 PFDVKDEEIYQL---FCGLNDLESSVE 368
PF++ D ++ L GL D+ +V+
Sbjct: 369 PFEMTDRDLNDLVKDLDGLTDVRVTVD 395
>gi|169617435|ref|XP_001802132.1| hypothetical protein SNOG_11896 [Phaeosphaeria nodorum SN15]
gi|111059820|gb|EAT80940.1| hypothetical protein SNOG_11896 [Phaeosphaeria nodorum SN15]
Length = 450
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 27/179 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K++L ++ E+ + +I V + P K +N+ A
Sbjct: 127 VWIGNLPWSATKESLRNFLMENTEMTAEQITRVHMPPPTKPVNPNWSTKPLNKG----FA 182
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKK----------LKGEDAPL 332
Y+ F +E + +A+A + G + + A P + K KG
Sbjct: 183 YVDFSTELAMYSAIALTETKMDGRALLIKNAKSFEGRPDKPKEEQEQDTGRGAKGAVKSA 242
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ K VFVGNL FDV EE+ + CG +E + + KG A+V F
Sbjct: 243 HPPNKRVFVGNLSFDVTKEELQVHYSQCG------PIENLHMATFEDSGKCKGYAWVTF 295
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 65 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 103
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 104 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 152
Query: 338 TVFVGNL-PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L P +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 202
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 69/178 (38%), Gaps = 42/178 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIFVG L V L EF + GE+ S R+ ID N
Sbjct: 343 KTIFVGRLSWNVDDDQLASEFAECGEVVSARVN----IDR-------------NTGKSRG 385
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGED----------APLYD 334
++ F S + A+ N I G + +DRA K + E+ AP
Sbjct: 386 FGHVEFADASSVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAKAFGDSTSAP--- 442
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLF 389
+FVGNL +D ++ +++ F +++S +R P R KG YV F
Sbjct: 443 -SSVLFVGNLSWDATEDAVWEAFGEHGEVKS-------VRLPTDRESGRPKGFGYVEF 492
>gi|340939568|gb|EGS20190.1| splicing factor (prp24)-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1069
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 59/211 (27%)
Query: 186 KEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKE 245
K EE + G G KR K +N E+ L +E ++FV +LP +V + L +
Sbjct: 570 KREETPEDGTGSKRAKNENNDEERLKRDREN---------TSVFVLDLPAEVTQTKLKQF 620
Query: 246 FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNM 305
F ++G I+++ I+ R G ++ A + FK+ ++AL +
Sbjct: 621 FREYGHINNIDIQK---------RDGEVV------------ALVEFKTSDEAKSALLRDG 659
Query: 306 AVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDL 363
+G +R+ P D T+FV N P D + I LF CG
Sbjct: 660 KYLGDRVVRVQ--------------PATDC--TLFVTNYPPDADERYIRHLFKDCG---- 699
Query: 364 ESSVEAVRVIRHPHMRVG--KGIAYVLFKTR 392
+ IR P ++ + YV F+ R
Sbjct: 700 -----EIHSIRFPSLKYNTKRRFCYVTFRNR 725
>gi|128844|sp|P13383.3|NUCL_RAT RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|205792|gb|AAA41732.1| nucleolin [Rattus norvegicus]
Length = 713
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 354 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 406
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E +VE +R++ KGIAY+ FK+
Sbjct: 407 NITEDELKEVF------EDAVE-IRLVSQDGRS--KGIAYIEFKS 442
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 30/203 (14%)
Query: 198 KRKKADNETEDMLVHRK-EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA+ E ++ K EE +EG ++ +FVGN+ + + L +EF FGEI R
Sbjct: 190 KKRKAEEVDEPIVKKSKVEEPAAEEG--IKNLFVGNMSWNIDEDWLRREFEGFGEIVGCR 247
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD 316
+ I D + R + + AD+ A + + G + +D
Sbjct: 248 V----ITDRETGRAKGFGYVEFSNAADAAKAQKEMHEYE------------LDGRQLNVD 291
Query: 317 RACPPRK--KLKGEDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
+ P K G A Y K+ T+F+GN+ F+ +E I ++F S+
Sbjct: 292 FSTPRAKPDANGGARANKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYG----SITR 347
Query: 370 VRVIRHPHMRVGKGIAYVLFKTR 392
V + KG YV F ++
Sbjct: 348 VSLPTDRDTGALKGFGYVDFSSQ 370
>gi|161760644|ref|NP_036881.2| nucleolin [Rattus norvegicus]
gi|55250726|gb|AAH85751.1| Nucleolin [Rattus norvegicus]
gi|149016332|gb|EDL75578.1| nucleolin, isoform CRA_c [Rattus norvegicus]
Length = 714
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 355 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 407
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E +VE +R++ KGIAY+ FK+
Sbjct: 408 NITEDELKEVF------EDAVE-IRLVSQDGRS--KGIAYIEFKS 443
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 66 MFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDP-----------------NTGRSRGFG 108
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK +S + L RLD R P+K + + P+ K +FVG L
Sbjct: 109 FILFKDAESVDKVLEH-------KEHRLDGRLIDPKKAMAMKKDPI----KKIFVGGLNP 157
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +++I + F + +EA+ + P +G ++ FK
Sbjct: 158 EAGEDQIREYF----ETFGEIEAIELPMDPKTNKRRGFVFITFK 197
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 37/175 (21%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G +D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 64 GEEDAGKM----FVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDP--------------- 104
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDI 335
N +I+FK + LA RLD R P+K + + P+
Sbjct: 105 --NTGRSRGFGFILFKEPSGVDKVLAQ-------KEHRLDGRQIDPKKAMAMKKEPV--- 152
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
K +FVG L + +E I + F ++E+ + + P +G ++ FK
Sbjct: 153 -KKIFVGGLNPETTEERIREYFGAFGEIET----IELPMDPKSNKRRGFVFITFK 202
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 37/159 (23%)
Query: 202 ADNETEDMLVHRKEE--GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS 259
A+N D H E G DD+ R +FVG L + K L F + EI+S+ +++
Sbjct: 21 AENGGGDSQDHNSAEAPGRDDD----RKLFVGGLSWETTDKELRDHFGAYREIESINVKT 76
Query: 260 VPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC 319
VP N A+IVFK+ +S + +A G H ++
Sbjct: 77 VP-----------------NTGRSRGFAFIVFKAPESIDKVMA------AGEHTINNKKV 113
Query: 320 PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC 358
P KK K +FVG L ++ D+EI F
Sbjct: 114 DP-KKAKARHG-------KIFVGGLSSEISDDEIRNFFS 144
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+GNL V ++ L EF +FGE+ VRI + D R + AD+ A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRI----VTDRDSGRSRGFGYVEFTNAADAAKA 288
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+ K + L + A N +RA + + +P D T+F+GN+ F
Sbjct: 289 HAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESD---TLFIGNIAFS 345
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ I + F S+ VR+ P KG YV F +
Sbjct: 346 ANENMISEAFA----EHGSILGVRLPTDPESGRPKGFGYVQFSS 385
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 28/168 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VG L V L E FG++ S R++ L + ++
Sbjct: 181 VWVGQLSWNVDNDWLKSEMEVFGQVTSARVQ---------------LDRTTGKS--RGFG 223
Query: 288 YIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKK-----TVFV 341
Y+ F + + + A + G IR+D + P + + + A ++ ++ T+F+
Sbjct: 224 YVDFATAAAAKKAFEEGQGKQVDGRAIRIDLSTP-KGDVSEDRAKKFNDQRSAPSSTLFI 282
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
GNL FD+ +++++ F V VR+ + P KG YV F
Sbjct: 283 GNLSFDITEDDVWNAFS----EHGEVSGVRLPKDPDSGRPKGFGYVEF 326
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDATSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +E+I + F + +EA+ + P +G ++ +K
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITYK 203
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 65 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 103
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 104 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 152
Query: 338 TVFVGNL-PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L P +E+I + F + +EA+ + P + +G ++ FK
Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFK 202
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 26/170 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VG L V L E FGE+ S R++ + T +G
Sbjct: 209 VWVGQLSWNVDNDWLKSEMEVFGEVTSARVQ---LDRTTGKSRG--------------FG 251
Query: 288 YIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKK----TVFVG 342
Y+ F + + + A + G IRLD + P + D + T+F+G
Sbjct: 252 YVDFATAAAAKKAFEEGQGKEVDGRAIRLDLSTPKGDVTENRAKKFNDQRSAPSSTLFIG 311
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
NL FD+ +++++ F V VR+ + P KG YV F +
Sbjct: 312 NLSFDISEDDVWNAFS----EHGEVSGVRLPKDPDSGRPKGFGYVEFAAQ 357
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + + + F + GE+ VR+ P D+ P+
Sbjct: 307 TLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDP--DSGRPKG---------------F 349
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F +++S +AAL A + G +RLD + P
Sbjct: 350 GYVEFAAQESAQAALDAMTGQELAGRPLRLDFSTP 384
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK D E E+ ++ ++E + TIFVG L + + L KEF G + R+
Sbjct: 140 KRKSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARV 199
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
I +G + + Y+ F+++ E A+ I G I D
Sbjct: 200 ---------IYERGTDRSRG--------YGYVDFENKSYAEKAIQEMQGKEIDGRPINCD 242
Query: 317 RACP------PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV 370
+ R K G D P + T+F+GNL F+ + I++LF V +V
Sbjct: 243 MSTSKPAGNNDRAKKFG-DTP-SEPSDTLFLGNLSFNADRDAIFELFA----KHGEVVSV 296
Query: 371 RVIRHPHMRVGKGIAYVLF 389
R+ HP KG YV F
Sbjct: 297 RIPTHPETEQPKGFGYVQF 315
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK D E E+ ++ ++E + TIFVG L + + L KEF G + R+
Sbjct: 142 KRKSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARV 201
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
I +G + + Y+ F+++ E A+ I G I D
Sbjct: 202 ---------IYERGTDRSRG--------YGYVDFENKSYAEKAIQEMQGKEIDGRPINCD 244
Query: 317 RACP------PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV 370
+ R K G D P + T+F+GNL F+ + I++LF V +V
Sbjct: 245 MSTSKPAGNNDRAKKFG-DTP-SEPSDTLFLGNLSFNADRDAIFELFA----KHGEVVSV 298
Query: 371 RVIRHPHMRVGKGIAYVLF 389
R+ HP KG YV F
Sbjct: 299 RIPTHPETEQPKGFGYVQF 317
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK D E E+ ++ ++E + TIFVG L + + L KEF G + R+
Sbjct: 144 KRKSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARV 203
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
I +G + + Y+ F+++ E A+ I G I D
Sbjct: 204 ---------IYERGTDRSRG--------YGYVDFENKSYAEKAIQEMQGKEIDGRPINCD 246
Query: 317 RACP------PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV 370
+ R K G D P + T+F+GNL F+ + I++LF V +V
Sbjct: 247 MSTSKPAGNNDRAKKFG-DTP-SEPSDTLFLGNLSFNADRDAIFELFA----KHGEVVSV 300
Query: 371 RVIRHPHMRVGKGIAYVLF 389
R+ HP KG YV F
Sbjct: 301 RIPTHPETEQPKGFGYVQF 319
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 28/171 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
F+GNLP ++ T +K+F + + +V + I D RK
Sbjct: 182 FFIGNLPWSAEEDT-VKQFFESQGVSAVYAVRL-ITDRDTGRKKGF-------------G 226
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRA----CPPRKKLKGEDAPLYD----IKKTV 339
YI S +A LA N A G +++D+A + K DAP V
Sbjct: 227 YIE-TSASDVDAVLALNGADFEGRELKVDKANERPANADRDTKPRDAPRQSGEAATDGNV 285
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
F+GNL F+ ++ I+ +V+AVR++ + +G Y F+
Sbjct: 286 FLGNLSFNSTEDSIWAALEQFG----TVKAVRIVYDRETQRPRGFGYCEFE 332
>gi|340914918|gb|EGS18259.1| RNA-binding protein rnp24-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 436
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP V K L K + G I I V + K P G+ K+ EN
Sbjct: 93 VWIGNLPFSVTKADLRKWLVDNSGGVITEDLITRVHMPTNK-PMAGS---KRTFENKG-- 146
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT------- 338
AY+ F + ++ AA+A + + G + + A + K E+ P + K
Sbjct: 147 FAYVDFATYEANTAAIALSETELNGRRLLIKDANNYEGRPKKEE-PEAAVAKIPEGRSST 205
Query: 339 -VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+FVGNL F+ +++++ F CG + V+V KG +V+F
Sbjct: 206 KIFVGNLAFNTTEDDLWAHFEKCG------KIRWVKVATFEDSGKCKGYGWVMF 253
>gi|67522120|ref|XP_659121.1| hypothetical protein AN1517.2 [Aspergillus nidulans FGSC A4]
gi|40744617|gb|EAA63773.1| hypothetical protein AN1517.2 [Aspergillus nidulans FGSC A4]
Length = 489
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+F+GNL V + L K+ K+G ++ V I I D++ KG
Sbjct: 310 QTVFIGNLFYDVTAEDLKKQMAKYGVVEGVNI----IYDSRGISKG-------------- 351
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ Y+ F S + A+ A +M + G + L A P T+++GN+
Sbjct: 352 YGYVQFSSNAAARRAIDAMHMRIFEGRRVTLYYAQTNITNSFKNKKP----TNTLYIGNV 407
Query: 345 PFDVKDEEIYQL---FCGLNDLESSVE 368
PF++ D ++ L GL D+ +V+
Sbjct: 408 PFEMTDRDLNDLVKDLDGLTDVRVTVD 434
>gi|171677404|ref|XP_001903653.1| hypothetical protein [Podospora anserina S mat+]
gi|170936770|emb|CAP61428.1| unnamed protein product [Podospora anserina S mat+]
Length = 1066
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 31/166 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P ++ L F GEI S+R S + EN
Sbjct: 677 TLFVTNYPPDADEEYLRNLFKAHGEIHSIRFPS------------------LKENVKRRF 718
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+ S EAAL + +GG + + P K + A + ++ + V N+P
Sbjct: 719 CYLTFRERASAEAALKLDGKALGGRCRLVVKISDPAHKQHRQGA--QEEERELHVINIPR 776
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+K++E+ F + S +R PH+ G A+V+ +T+
Sbjct: 777 TMKEDEVEGHFTKAGKVVS-------VRIPHL----GTAFVVMQTK 811
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 37/177 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VGNLP L F + G +D V+ I+ +I + +
Sbjct: 123 IYVGNLPYTFTAAELTSVFSEAGSVDDVQ----------------IIYDKITDRSRGFAF 166
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPR-------------KKLKGEDAPLYD 334
+ +E++ +A FN A++GG IR++ PR L+ D Y
Sbjct: 167 VTMATAEEAAKAVQMFNGALLGGRTIRVNFPEVPRGGERAVASAAAAKTSLRVVDDGTYK 226
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V+ GNL + V+ + + F G L S RVI +G +V F+T
Sbjct: 227 ----VYAGNLGWGVRADALKTAFEGQPGLLGS----RVIFERDTGRSRGFGFVSFQT 275
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK D E E+ ++ ++E + TIFVG L + + L KEF G + R+
Sbjct: 142 KRKSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARV 201
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
I +G + + Y+ F+++ E A+ I G I D
Sbjct: 202 ---------IYERGTDRSRG--------YGYVDFENKSYAEKAIQEMQGKEIDGRPINCD 244
Query: 317 RACP------PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV 370
+ R K G D P + T+F+GNL F+ + I++LF V +V
Sbjct: 245 MSTSKPAGNNDRAKKFG-DTP-SEPSDTLFLGNLSFNADRDAIFELFA----KHGEVVSV 298
Query: 371 RVIRHPHMRVGKGIAYVLF 389
R+ HP KG YV F
Sbjct: 299 RIPTHPETEQPKGFGYVQF 317
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 42/183 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++FVGNLP + K+ L + F G+I+ V S+P KG
Sbjct: 294 KSVFVGNLPFSMTKEWLEQIFSWCGDIERV---SLPTDWESGKIKG-------------- 336
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-------------L 332
A++ F E S E A+ N G +R++ + P L
Sbjct: 337 FAFLDFADEDSAEKAVGKNGEDCEGRDLRVNYSFPKNDNAHSGKGKGGKGKGKGKGHHEL 396
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVG--KGIAYVL 388
+ +VFVGNLP+ + E + ++F CG R G +G AY+
Sbjct: 397 GEKSASVFVGNLPWSMTQEWLSEVFGDCG--------SITRCFMPTDRETGNPRGFAYID 448
Query: 389 FKT 391
F T
Sbjct: 449 FDT 451
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK D E E+ ++ ++E + TIFVG L + + L KEF G + R+
Sbjct: 140 KRKSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARV 199
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
I +G + + Y+ F+++ E A+ I G I D
Sbjct: 200 ---------IYERGTDRSRG--------YGYVDFENKSYAEKAIQEMQGKEIDGRPINCD 242
Query: 317 RACP------PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV 370
+ R K G D P + T+F+GNL F+ + I++LF V +V
Sbjct: 243 MSTSKPAGNNDRAKKFG-DTP-SEPSDTLFLGNLSFNADRDAIFELFA----KHGEVVSV 296
Query: 371 RVIRHPHMRVGKGIAYVLF 389
R+ HP KG YV F
Sbjct: 297 RIPTHPETEQPKGFGYVQF 315
>gi|270010528|gb|EFA06976.1| hypothetical protein TcasGA2_TC009936 [Tribolium castaneum]
Length = 469
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
VFVGNLPFD EEI + F D+ VR+ H +G AYV + V
Sbjct: 341 VFVGNLPFDATKEEIVEHFSKAGDIRH----VRIPTDKHSNKPRGFAYVELENEV 391
>gi|34534595|dbj|BAC87055.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 243 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 295
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 296 KVTQDELKEVF------EDAAE-IRLVSKDGNS--KGIAYIEFKTEA 333
>gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori]
Length = 303
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 37/159 (23%)
Query: 202 ADNETEDMLVHRKEE--GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS 259
A+N D H E G DD+ R +FVG L + K L F + EI+S+ +++
Sbjct: 21 AENGGGDSQDHNSAEAPGRDDD----RKLFVGGLSWETTDKELRDHFGAYREIESINVKT 76
Query: 260 VPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC 319
VP N A+IVFK+ +S + +A G H ++
Sbjct: 77 VP-----------------NTGRSRGFAFIVFKAPESIDKVMA------AGEHTINNKKV 113
Query: 320 PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC 358
P KK K +FVG L ++ D+EI F
Sbjct: 114 DP-KKAKARHG-------KIFVGGLSSEISDDEIRNFFS 144
>gi|193788267|dbj|BAG53161.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 273 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 325
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 326 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKTEA 363
>gi|255711606|ref|XP_002552086.1| KLTH0B06886p [Lachancea thermotolerans]
gi|238933464|emb|CAR21648.1| KLTH0B06886p [Lachancea thermotolerans CBS 6340]
Length = 396
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI-KFGEID-SVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNL K+ L + FI K E+D R+ I+ +P + Q + +
Sbjct: 125 VWIGNLTFDTSKEDLCRFFIAKTKELDPDSRVEESDILRVNLP----LAQNDGKQVKNKG 180
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKL--KGEDAPLYDIKKT 338
A++ F++++ +A +A + + + G ++ + + P + L ++ P +
Sbjct: 181 FAHMNFRTQKQMDAVIALSESHLNGRNMLIKNSASFDGRPDKNDLISMSKNPP----SRI 236
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVGNL FD DE + + F CG + +R+ KG A+V FK
Sbjct: 237 LFVGNLSFDTTDELLKKHFQHCG------EIVKIRMATFQDTGKCKGFAFVDFK 284
>gi|255945691|ref|XP_002563613.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588348|emb|CAP86453.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 356
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL V + L K F K+G +++ I + D + KG
Sbjct: 122 TLYVGNLFFDVTAEDLRKHFEKYGAVENALI----VHDARGLSKG--------------F 163
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F + E++T+A + ++ G + + + + + E+ P KT+++GNLP
Sbjct: 164 GYVTFSTVEEATQAITQQHGGILEGREVVVQFSNTTYRAM-AENKP----SKTLYIGNLP 218
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+++ D+++ L L+ V VR+ + +G A++ F
Sbjct: 219 YELTDQDLQDLIADLH----GVTDVRIPVDRRTGLPRGFAHIDF 258
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 2 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDP-----------------NTGRSRGFG 44
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E L RLD R P+K + + P+ K +FVG L
Sbjct: 45 FILFKEPGSVEKVLE-------QKEHRLDGRLIDPKKAMAMKKDPV----KKIFVGGLNP 93
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P +G ++ FK
Sbjct: 94 EATEEKIREYFGEFGE----IEAIELPMDPKTNKRRGFVFITFK 133
>gi|361126476|gb|EHK98476.1| putative RNA-binding protein rnp24 [Glarea lozoyensis 74030]
Length = 470
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE-----NA 282
I++GNL + K+ L K F++ +I I T+I G +K N+ N
Sbjct: 160 IWIGNLAFHISKEDLRKFFVEKSDITDDLI-------TRIHMPGPNDKKSANKVEERRNG 212
Query: 283 DSVH----AYIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKGEDAP 331
+VH AY+ F + + A+ + ++GG + + R +++ + E P
Sbjct: 213 KTVHNTGYAYVDFSTAEGATEAVELSEQLLGGRRVLIKNNKSFEGRPQKTKEESRNEGKP 272
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
K VFVGNLPFD + I + CG ++ +++ KG +V F
Sbjct: 273 P---SKRVFVGNLPFDATEAIIQSHYEKCG------AIGTLKLATFEDSGKCKGYGWVTF 323
>gi|119591368|gb|EAW70962.1| nucleolin, isoform CRA_c [Homo sapiens]
gi|193785526|dbj|BAG50892.1| unnamed protein product [Homo sapiens]
Length = 536
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 176 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 228
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 229 KVTQDELKEVF------EDAAE-IRLVSKDGK--SKGIAYIEFKTEA 266
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 2 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 44
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 45 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 93
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P +G ++ FK
Sbjct: 94 EATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 133
>gi|441669563|ref|XP_003274815.2| PREDICTED: nucleolin [Nomascus leucogenys]
Length = 655
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 319 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 371
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 372 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 407
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 37/175 (21%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G +D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 64 GEEDAGKM----FVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDP--------------- 104
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDI 335
N +I+FK + LA RLD R P+K + + P+
Sbjct: 105 --NTGRSRGFGFILFKEPSGVDKVLAQ-------KEHRLDGRQIDPKKAMAMKKEPV--- 152
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
K +FVG L + +E I + F ++E+ + + P +G ++ FK
Sbjct: 153 -KKIFVGGLNPETTEERIREYFGAFGEIET----IELPMDPKSNKRRGFVFITFK 202
>gi|387016396|gb|AFJ50317.1| Heterogeneous nuclear ribonucleoprotein D0 isoform b [Crotalus
adamanteus]
Length = 330
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 30/147 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+DEGK+ FVG L KK L F KFGE+ ++ PI
Sbjct: 69 EDEGKM----FVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPIT--------------- 109
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+++FK +S E + G I P R K P+ K
Sbjct: 110 --GRSRGFGFVLFKESESVEKVTDQKEHKLNGKVID-----PKRAKAMKTKEPV----KK 158
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLES 365
+FVG L D +E+I + F G ++ES
Sbjct: 159 IFVGGLSPDTPEEKIREYFGGFGEVES 185
>gi|194211413|ref|XP_001495211.2| PREDICTED: nucleolin [Equus caballus]
Length = 705
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 345 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 397
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E ++E +R++ KGIAY+ FKT
Sbjct: 398 KVTQDELKEVF------EDALE-IRLVSKDGKS--KGIAYIEFKT 433
>gi|402889647|ref|XP_003908120.1| PREDICTED: nucleolin isoform 3 [Papio anubis]
Length = 634
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 274 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 326
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 327 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKTEA 364
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKGE-----DAPLYD 334
AY+ F +++S ALA N + G IR+ +RA K ++ + D+P +
Sbjct: 188 AYVEFYTQESVIKALAMNGFELNGQRIRVQSSQAEKNRAARAAKMIQQQTVEVADSP-FT 246
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
I+ T G+L + + EI Q+F ++ S V ++R PH + G AY+ FK
Sbjct: 247 IQVTGLTGSLS-SISEVEIRQMFSPFGNIIS----VEILRDPHSNLPLGQAYIKFK 297
>gi|402889645|ref|XP_003908119.1| PREDICTED: nucleolin isoform 2 [Papio anubis]
Length = 683
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 323 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 375
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 376 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKTEA 413
>gi|432107178|gb|ELK32592.1| Nucleolin [Myotis davidii]
Length = 1374
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 1014 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 1066
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V +E+ ++F E ++E +R++ KGIAY+ FKT
Sbjct: 1067 KVTQDELKEVF------EDAME-IRLVSKDGKS--KGIAYIEFKTEA 1104
>gi|115475858|ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|35215091|dbj|BAC92448.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|42409159|dbj|BAD10426.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|215768436|dbj|BAH00665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200931|gb|EEC83358.1| hypothetical protein OsI_28764 [Oryza sativa Indica Group]
gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like [Oryza sativa Indica Group]
Length = 350
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 29/163 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IF+G LP T + F K+GEI +D A++ K
Sbjct: 17 IFIGGLPKDTTMGTFKEYFGKYGEI----------VD-------AVIMKDRFTQKPRGFG 59
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK-KTVFVGNLPF 346
+I F + + N VI G + + R P KG APL D K K +FVG LP
Sbjct: 60 FITFADPAVVDRVIEDNH-VINGKEVEIKRTIP-----KGA-APLKDFKTKKIFVGGLPS 112
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+K++E + F + VE +IR +G +V+F
Sbjct: 113 ALKEDEFKEFFSKFGKV---VEH-EIIRDHSTNRSRGFGFVVF 151
>gi|344292407|ref|XP_003417919.1| PREDICTED: nucleolin-like [Loxodonta africana]
Length = 695
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+R KG+D+ +T+ NLP+
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLERP-------KGKDSKKDRDARTLLAKNLPY 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V EE+ ++F E ++E V + R G AY+ FKT
Sbjct: 405 KVTQEELKEVF------EDAMEIRLVSKDGKSR---GFAYIEFKT 440
>gi|8163877|gb|AAF73892.1|AF224345_1 enhancer binding protein-1 [Entamoeba histolytica]
Length = 247
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 31/189 (16%)
Query: 210 LVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR 269
LV R E D+ +F+ NLP + ++ L + F KFG ++ + +I T
Sbjct: 44 LVKRTNEVTDN------MLFIKNLPFAITEEKLKEMFSKFGVVE------ITLIKTH--- 88
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRA---CPPRKKL 325
+K+ N ++ A+I K+ + + A+A + + G I + A ++
Sbjct: 89 -----RKKGNVTKNNGIAFITVKTAEEQKKAIAEMDNFEVEGRKITVAAAYKKVENKQTT 143
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHP---HMRVGK 382
K + P + VFV NLPF + DE +LF + +E+++ V RH ++ K
Sbjct: 144 KKTNEPKSLSETNVFVKNLPFTLTDEGFKKLFEKYDVVEATI----VKRHNKKLNVDRSK 199
Query: 383 GIAYVLFKT 391
G +V FKT
Sbjct: 200 GYGFVTFKT 208
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P +G ++ FK
Sbjct: 93 EATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFK 132
>gi|355565264|gb|EHH21753.1| hypothetical protein EGK_04889, partial [Macaca mulatta]
Length = 705
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 345 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 397
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 398 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 433
>gi|21750187|dbj|BAC03738.1| unnamed protein product [Homo sapiens]
Length = 687
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 327 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 379
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 380 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 415
>gi|326928651|ref|XP_003210489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Meleagris gallopavo]
gi|449474690|ref|XP_004175898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
gi|449474694|ref|XP_002196057.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
Length = 262
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E L RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKEPGSVEKVLE-------QKEHRLDGRLIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P +G ++ FK
Sbjct: 93 EATEEKIREYFGEFGE----IEAIELPMDPKTNKRRGFVFITFK 132
>gi|402889643|ref|XP_003908118.1| PREDICTED: nucleolin isoform 1 [Papio anubis]
Length = 695
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 335 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 387
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 388 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 423
>gi|345315973|ref|XP_001509329.2| PREDICTED: nucleolin-like, partial [Ornithorhynchus anatinus]
Length = 638
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S E AL N + + GN ++L++A K + DA +T+FV NLP+
Sbjct: 298 GYVDFESADDLEKALELNGSKVFGNEMKLEKAKAKETKKE-RDA------RTLFVKNLPY 350
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V EE+ ++F E +V+ V M KGIAY+ FKT
Sbjct: 351 KVTQEEMKEVF------EDAVDVRLVTGKDGMS--KGIAYIEFKT 387
>gi|426338868|ref|XP_004033393.1| PREDICTED: nucleolin [Gorilla gorilla gorilla]
Length = 710
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 350 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 402
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 403 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 438
>gi|197098386|ref|NP_001127178.1| nucleolin [Pongo abelii]
gi|75070972|sp|Q5RF26.3|NUCL_PONAB RecName: Full=Nucleolin
gi|55725699|emb|CAH89631.1| hypothetical protein [Pongo abelii]
Length = 712
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 405 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 440
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L F + G ++ + I ++ +++
Sbjct: 127 LFVGNLAYDVNSQALAMLFEQAGTVEIAEV---------------IYNRETDQSRG--FG 169
Query: 288 YIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIKKTVFVGNLP 345
++ S E A+ FN + G + +++A P + + E AP +Y+ V+VGNLP
Sbjct: 170 FVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAP--RGSRPERAPRVYEPAFRVYVGNLP 227
Query: 346 FDVKDEEIYQLFC 358
+DV + + QLF
Sbjct: 228 WDVDNGRLEQLFS 240
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L F + G ++ + I ++ +++
Sbjct: 137 LFVGNLAYDVNSQALAMLFEQAGTVEIAEV---------------IYNRETDQSRG--FG 179
Query: 288 YIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIKKTVFVGNLP 345
++ S E A+ FN + G + +++A P + + E AP +Y+ V+VGNLP
Sbjct: 180 FVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAP--RGSRPERAPRVYEPAFRVYVGNLP 237
Query: 346 FDVKDEEIYQLFC 358
+DV + + QLF
Sbjct: 238 WDVDNGRLEQLFS 250
>gi|397502540|ref|XP_003821912.1| PREDICTED: nucleolin-like [Pan paniscus]
Length = 710
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 350 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 402
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 403 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 438
>gi|55956788|ref|NP_005372.2| nucleolin [Homo sapiens]
gi|90110781|sp|P19338.3|NUCL_HUMAN RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|62988860|gb|AAY24247.1| unknown [Homo sapiens]
gi|119591367|gb|EAW70961.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|119591369|gb|EAW70963.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|168277892|dbj|BAG10924.1| nucleolin [synthetic construct]
Length = 710
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 350 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 402
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 403 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 438
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 37/181 (20%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+RT+F NLPLK +++ L + F K G I+ V+I I+D N
Sbjct: 125 IRTVFAYNLPLKAEERDLFEFFSKAGPIEDVKI----IMDR-------------NTRKSK 167
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT------ 338
AYI + ++ A+A ++ G + + ++ K L E A +
Sbjct: 168 GFAYIEYTNKADIVTAMALTGQILMGQAVMV-KSSEAEKNLAWEAAQAQNASMLQMSTIG 226
Query: 339 --------VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+++GNL +++++++ Q+F +VE + + + P R +G +V ++
Sbjct: 227 NAGTGPCKLYIGNLHPNIQEQDLKQVFEAFG----AVEYITLQKDPTGR-SQGYGFVQYQ 281
Query: 391 T 391
T
Sbjct: 282 T 282
>gi|355761078|gb|EHH61752.1| hypothetical protein EGM_19839, partial [Macaca fascicularis]
Length = 705
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 345 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 397
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 398 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 433
>gi|148708273|gb|EDL40220.1| nucleolin, isoform CRA_a [Mus musculus]
Length = 537
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 182 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 234
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 235 NITEDELKEVF------EDAME-IRLVSQDGK--SKGIAYIEFKSEA 272
>gi|403278071|ref|XP_003930653.1| PREDICTED: nucleolin-like [Saimiri boliviensis boliviensis]
Length = 713
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 353 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 405
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRV 393
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 406 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKTEA 443
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 41/169 (24%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L F +G+I+S+ +++ P N
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDP-----------------NTGRSRG 96
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF +S + ++ N +I G + +A K +FVG L
Sbjct: 97 FAFIVFAKAESLDKIMSANDHIINGKKVDPKKAKARHGK--------------IFVGGLS 142
Query: 346 FDVKDEEIYQLFCGLN---DLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ DE+I F D+E + + R KG ++ F++
Sbjct: 143 TELSDEDIKNFFSQFGTIVDVEMPFDKTKNQR-------KGFCFITFES 184
>gi|380091978|emb|CCC10246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 456
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 31/175 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL + L EF + S R+ + D + R
Sbjct: 168 TLWVGNLGWGIDDAILFAEFEECEGAKSARV----VTDRESGRSRGF------------- 210
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACP-----PRKKLKGEDAPLYDI----K 336
Y+ F++ +Q+ +A A + ++ G +RLD A P+ K A D
Sbjct: 211 GYVDFENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDTISPES 270
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+FVGN+PF + + F + +SV ++R+ KG AYV F +
Sbjct: 271 DTLFVGNMPFTADESAVSDFFNSV----ASVASLRIPTDQESGRPKGFAYVTFNS 321
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 31/175 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL + L EF + S R+ + D + R
Sbjct: 168 TLWVGNLGWGIDDAILFAEFEECEGAKSARV----VTDRESGRSRGF------------- 210
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACP-----PRKKLKGEDAPLYDI----K 336
Y+ F++ +Q+ +A A + ++ G +RLD A P+ K A D
Sbjct: 211 GYVDFENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDTISPES 270
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
T+FVGN+PF + + F + +SV ++R+ KG AYV F +
Sbjct: 271 DTLFVGNMPFTADESAVSDFFNSV----ASVASLRIPTDQESGRPKGFAYVTFNS 321
>gi|148708274|gb|EDL40221.1| nucleolin, isoform CRA_b [Mus musculus]
Length = 488
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 136 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 188
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 189 NITEDELKEVF------EDAME-IRLVSQDGK--SKGIAYIEFKS 224
>gi|388580158|gb|EIM20475.1| hypothetical protein WALSEDRAFT_55089 [Wallemia sebi CBS 633.66]
Length = 391
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 24/169 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEF-IKFGEIDSV-RIRSVPIIDTKIPRKGAILQKQINENAD 283
R +F+G+L ++ L K F K ID V +I P+++ + D
Sbjct: 33 RRVFIGDLKPNHNEENLTKLFNDKMSTIDQVAKIPGEPVVNVTVKH-------------D 79
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP-----PRKKLKGEDAPLYDIKKT 338
+AYI F++ AL F+ + G I++ R RK+ + D +
Sbjct: 80 RGYAYIEFRNTDEAAYALQFDGTIFQGEGIQIKRPQEVLDELQRKQGHTVSGTVPDSDQK 139
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
+FVG+LP + DE++ +L +L S +++ V KG A+
Sbjct: 140 IFVGSLPTFLNDEQVMELLGSFGELRS----FNLVKEGTSDVSKGFAFC 184
>gi|1279382|emb|CAA65831.1| spliceosomal protein [Drosophila melanogaster]
Length = 366
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 26/174 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA--DS 284
TI+ G L KV + L + F++ G + + +P I+ +N + D
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAGPVGKSGHTCI------VPSSSLIVMLAVNVHMPKDR 67
Query: 285 V------HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK 337
V + ++ F SE+ + + NM + G IR+++A +K L D+
Sbjct: 68 VTQMHQGYGFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGA 119
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+F+GNL +V ++ +Y F + ++ +++R P K A++ F +
Sbjct: 120 NIFIGNLDVEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFAS 170
>gi|297265320|ref|XP_001116949.2| PREDICTED: nucleolin-like [Macaca mulatta]
gi|75075722|sp|Q4R4J7.3|NUCL_MACFA RecName: Full=Nucleolin
gi|67967725|dbj|BAE00345.1| unnamed protein product [Macaca fascicularis]
gi|67971272|dbj|BAE01978.1| unnamed protein product [Macaca fascicularis]
Length = 711
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 351 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 403
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 404 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 439
>gi|354472673|ref|XP_003498562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Cricetulus griseus]
Length = 243
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 5 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 47
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 48 FILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 96
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P + +G ++ +K
Sbjct: 97 EATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITYK 136
>gi|332815667|ref|XP_516145.3| PREDICTED: nucleolin [Pan troglodytes]
Length = 711
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 351 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 403
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 404 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 439
>gi|189306|gb|AAA59954.1| nucleolin [Homo sapiens]
Length = 707
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 350 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 402
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 403 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 438
>gi|398409430|ref|XP_003856180.1| hypothetical protein MYCGRDRAFT_31509 [Zymoseptoria tritici IPO323]
gi|339476065|gb|EGP91156.1| hypothetical protein MYCGRDRAFT_31509 [Zymoseptoria tritici IPO323]
Length = 427
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 41/179 (22%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQINENADSVH 286
I++GNLP V +++L + F+ G I S I + + ++ + KG
Sbjct: 93 IWIGNLPYSVNRESLQEFFLNAGGIGSTDIMRINMPLNERKQNKG--------------F 138
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK---------- 336
AY+ F S E ALA + ++ G RAC + E P +
Sbjct: 139 AYVDFTSPAVLEIALALSEKLVNG------RACLIKNANSFEGRPKVSTEAKAADAAAKA 192
Query: 337 ------KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
K VFVGNL F+ +EI + F VE V + KG +V F
Sbjct: 193 AGKEPTKRVFVGNLGFEATRDEINEHFSQA----GQVEDVFLATFEDSGKCKGFGWVTF 247
>gi|395823283|ref|XP_003803977.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Otolemur garnettii]
Length = 700
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 344 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPY 396
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F D +R++ KGIAY+ FKT
Sbjct: 397 KVTQDELKEVFEDAMD-------IRIVSKDGKS--KGIAYIEFKT 432
>gi|449268380|gb|EMC79248.1| Nucleolin [Columba livia]
Length = 648
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 37/169 (21%)
Query: 227 TIFVGNLPLKVKK----KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
++FVGNL + K KT IKEF FG+ +++ +D +I A
Sbjct: 234 SVFVGNL-VSTKDFEELKTGIKEF--FGK------KNIEALDVRI-------------GA 271
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
Y+ F S + + AL N + G ++L++A K+ E+ D + T+FV
Sbjct: 272 SKRFGYVDFSSAEELDKALQLNGKKLMGLEVKLEKAK--SKETIKENKKERDAR-TLFVK 328
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
NLP+ + ++E+ +F E+++E +R++ + KG+AY+ FKT
Sbjct: 329 NLPYRLTEDEMKDVF------ENALE-IRIVMNKEGN-SKGMAYIEFKT 369
>gi|326431512|gb|EGD77082.1| RNA binding protein [Salpingoeca sp. ATCC 50818]
Length = 386
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 32/174 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R IFVG+L + ++ L+ F KFG I + V + D + R
Sbjct: 19 RKIFVGSLDPRTTREQLVDYFDKFGNI----VDCVVMTDAQGTRSRGF------------ 62
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP--------PRKKLKGEDAPLYDIKK 337
++ FK S E LA I G I RA P +++ + + ++K
Sbjct: 63 -GFVTFKEAASVEQVLASGPHEIAGRVIDPKRALPRHHHDDPHQQQQQQPQQHRQPRVRK 121
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESS-VEAVRVIRHPHMRVGKGIAYVLFK 390
VF+G LP D K+EEI F D+E ++ R+ P +G +V+F+
Sbjct: 122 -VFLGGLPHDAKEEEIKDFFSKYGDVEDVIIQYDRISGRP-----RGFGFVVFE 169
>gi|417404108|gb|JAA48828.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 713
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 354 YVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPYK 406
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E ++E +R++ KGIAY+ FKT
Sbjct: 407 VTQDELKEVF------EDAME-IRLVSKDGKS--KGIAYIEFKT 441
>gi|261189727|ref|XP_002621274.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239591510|gb|EEQ74091.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239612961|gb|EEQ89948.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327352134|gb|EGE80991.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 422
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G +T+FV L V + L +EF +FG I+ +RI ++DT P+K +
Sbjct: 98 GDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRI----VVDTHNPKKNP-------KK 146
Query: 282 ADSVHAYIVFKSEQSTEAAL 301
+A+IV++ EQ +AA
Sbjct: 147 PHRGYAFIVYEREQDMKAAY 166
>gi|374721345|gb|AEZ68008.1| nucleolin [Chlorocebus aethiops]
Length = 712
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKERDARTLLAKNLPY 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E + E +R++ KGIAY+ FKT
Sbjct: 405 KVTQDELKEVF------EDAAE-IRLVSKDGKS--KGIAYIEFKT 440
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 37/175 (21%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G +D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 47 GEEDAGKM----FVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDP--------------- 87
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDI 335
N +I+FK S + V+ RLD R P+K + + P+
Sbjct: 88 --NTGRSRGFGFILFKDAASVD-------KVLEQKEHRLDGRLIDPKKAMAMKKDPI--- 135
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
K +FVG L + +++I + F + +EA+ + P +G ++ FK
Sbjct: 136 -KKIFVGGLNPEAGEDKIREYF----ETFGEIEAIELPMDPKTNKRRGFVFITFK 185
>gi|327305337|ref|XP_003237360.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326460358|gb|EGD85811.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 422
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 16/197 (8%)
Query: 197 EKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
+K++KA+ E E + K+ D +FVGNL V ++ L EF +FGE+ R
Sbjct: 211 QKKRKAEEEAEPVA---KKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTR 267
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQ--STEAALAFNMAVIGGNHIR 314
I + D + R + D+V A+ K + + L + A GN
Sbjct: 268 I----VTDRESGRSRGFGYVEFVNVEDAVKAHAAKKDVELDGRKMNLDYANARANGNANP 323
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIR 374
+RA K + +P D T+F+GN+ F + + +LF ++ +R+
Sbjct: 324 RERADNRAKSFGDQTSPESD---TLFIGNISFSADENMVQELFSKYG----MIQGIRLPT 376
Query: 375 HPHMRVGKGIAYVLFKT 391
P KG YV F +
Sbjct: 377 DPESGRPKGFGYVQFSS 393
>gi|359488670|ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Vitis vinifera]
Length = 948
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 24/97 (24%)
Query: 223 KLLRTIFVGNLPLKV-KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
K LRT+FV +P K +K+ L+ F KFGE+ ID IP
Sbjct: 487 KALRTLFVNGIPQKNNRKEALLSHFRKFGEV----------IDIYIP------------- 523
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
+S A++ F + EAAL AV+G I+L A
Sbjct: 524 LNSERAFVQFSKREEAEAALQAPDAVMGNRFIKLWWA 560
>gi|387050|gb|AAA36966.1| nucleolin, C23, partial [Cricetulus griseus]
Length = 679
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 316 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 368
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 369 NITEDELKEVF------EDALE-IRLVSQDGKS--KGIAYIEFKS 404
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 159 SENKKTKKRK--RDDVEKDYV-----EKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLV 211
S NKKTK++K DDV V +KK AKE E G GE +A T+
Sbjct: 80 SPNKKTKRKKLEDDDVAATGVSDTPKKKKNPRTAKENESN--GGGE-MPEATELTKTNTT 136
Query: 212 HRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG 271
++ G D I+VG +P + + F G I V + P +T R
Sbjct: 137 TSQDNG--DAPNTNTKIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFP--ETGKFRGI 192
Query: 272 AILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
AI I FK+E + + ALA + A +GG +++ R + AP
Sbjct: 193 AI---------------ITFKTEAAAKRALALDGADMGGLFLKIQPYKATRANKASDFAP 237
Query: 332 -LYDIKKTVFVGNLPFDVKDEEIYQLF 357
+ + ++VGNL +D+ +EE+ + F
Sbjct: 238 EILEGYNRIYVGNLSWDITEEELRKFF 264
>gi|405957004|gb|EKC23243.1| Heterogeneous nuclear ribonucleoprotein A/B [Crassostrea gigas]
Length = 475
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 26/132 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R IFVGNL + +K L F KFGE+++ +L++ +
Sbjct: 58 RKIFVGNLSWETSQKDLKDYFTKFGEVEN-----------------CVLKQDLETKRSRG 100
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++VFK + + L +GG +I +A P +K+ ++ K +FVG +
Sbjct: 101 FGFVVFKDPSTVDKVLDEKTHNLGGRNIDPKKANPRKKE---------EVIKKIFVGKVD 151
Query: 346 FDVKDEEIYQLF 357
+ + EI + F
Sbjct: 152 PSLTEAEIKEYF 163
>gi|320580999|gb|EFW95221.1| RNA-binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 343
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNL ++ +I ++ E I I IP+K A K A
Sbjct: 69 VWIGNLAYDTTREDIISFLVRKSEEMEPAITENDITRVNIPKKTAHKIKGF--------A 120
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD--IKKTVFVGNLP 345
YI FKS++ E A+A + + G + + A + + + PL + +FVGNL
Sbjct: 121 YIDFKSQEHVETAIALSEQELNGRRLLIKDANSFEGRPQKAEEPLSKNPPSRVLFVGNLS 180
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
FD +E + + F CG + +R+ KG ++ FK
Sbjct: 181 FDTTEELLEEHFRHCG------EIVRIRMATFEDSGKCKGFCFIDFK 221
>gi|26341628|dbj|BAC34476.1| unnamed protein product [Mus musculus]
Length = 550
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 195 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 247
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 248 NITEDELKEVF------EDAME-IRLVSQDGK--SKGIAYIEFKS 283
>gi|148708277|gb|EDL40224.1| nucleolin, isoform CRA_e [Mus musculus]
Length = 706
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 351 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 403
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 404 NITEDELKEVF------EDAME-IRLVSQDGK--SKGIAYIEFKS 439
>gi|297818368|ref|XP_002877067.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322905|gb|EFH53326.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 934
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 114 SILGFEPNGTIENEIKKEHSSNVGSESYLN-RQKQNSNFSVEGKKRSENKKTKKRKRDDV 172
+I +G EN + S+ G+E+ R ++ + SV G+ R N + +++ D
Sbjct: 321 AISTLNSHGVDENVAPLDDSNRDGTENGCGIRDSRSISQSVWGRMRGSNSQANSKEKADA 380
Query: 173 EKDYV-----EKKYGVIAKEEEGKKVGVGEKRKK---ADNETEDMLVHRKEEGFDDEGKL 224
+ + K + GK+ VGE K + N + DM+ + ++ K
Sbjct: 381 VLNSSAGPEDQLKEVSVNSSRHGKQNHVGESVAKVVDSSNISNDMMNNTRKP----TQKA 436
Query: 225 LRTIFVGNLPLKVKKKTLI-KEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
+RT+FV N+P + ++ LI F KFG+ +ID IP +
Sbjct: 437 MRTLFVNNVPHESNRRDLILAHFQKFGK----------VIDIHIP-------------VN 473
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
S A++ F + E+AL AV+G I+L A
Sbjct: 474 SERAFVQFSKREEAESALRAPDAVMGNRFIKLWWA 508
>gi|26327461|dbj|BAC27474.1| unnamed protein product [Mus musculus]
Length = 707
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 405 NITEDELKEVF------EDAME-IRLVSQDGK--SKGIAYIEFKS 440
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 33/172 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTI L KV + L F++ G + V I I D + R I
Sbjct: 154 RTIMCMQLSAKVTNRDLEDFFMRAGVVRDVHI----IADRQSRRSKGI------------ 197
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKGEDAPLYDIKKT 338
AY+ F+ E S AL+F+ + G I + +R + LK + P K
Sbjct: 198 -AYVEFQEESSVFTALSFSGQKVHGIPIMIQPTMAEKNRLAAAAENLKKAEGP-----KK 251
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
++VG+L +++ ++ + +F + VE V ++R V +G A+V F+
Sbjct: 252 LYVGSLHYNITEDMLQGIFSPFGN----VERVSIMRDTATNVSRGYAFVEFR 299
>gi|431917886|gb|ELK17115.1| Nucleolin [Pteropus alecto]
Length = 548
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
Y+ F+S + E AL + GN I+L+ K KG+D+ +T+ NLP+
Sbjct: 288 YVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDSKKDRDARTLLAKNLPYK 340
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E ++E +R++ KGIAY+ FKT
Sbjct: 341 VTQDELKEVF------EDAME-IRLVSKDGKS--KGIAYIEFKT 375
>gi|351714226|gb|EHB17145.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 297
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ + P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQ----------ARPVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + + NM + G IR+++A K L DI +F+GNL
Sbjct: 57 GFVEFLSEEDADYDIKIMNMIKLYGKPIRVNKASAHNKNL--------DIGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++ +Y F + ++ +++R P K A++ F +
Sbjct: 109 PEIDEKLLYDTFSTFGVI---LQTPKIMRDPDTGNSKSYAFINFAS 151
>gi|168068037|ref|XP_001785903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662429|gb|EDQ49286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 780
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+G L RT+FV NLPL+ + L ++F FGE+ + R+ PI TK P+ A ++
Sbjct: 517 DDG-LSRTVFVRNLPLEANVQDLRRQFSDFGEVKAFRLVLHPI--TKRPKGTAFVEFVTA 573
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC 319
E A I S + L V+GG +I ++ A
Sbjct: 574 EGAQEA---IAAASRTEADGGL-----VVGGRNIIMNLAL 605
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 34/199 (17%)
Query: 198 KRKKADNETEDMLV---HRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDS 254
K++KA+ E E++ V + EE + TI+ G + + + + F + GEI
Sbjct: 116 KKRKAEEEQEEIPVPKAAKTEENY--------TIWCGGISFEATADDVREFFGECGEIKD 167
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
VRIR + + +N H I F ++++ +AA+A + G IR
Sbjct: 168 VRIR---------------IDEATGKNRGFCH--IDFATQEAKDAAVALSGNEFLGRRIR 210
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ--LFCGLNDLESSVEAVRV 372
+D A +K P KK VFV NL D DE+ ++ L + + V +R+
Sbjct: 211 IDGADGGKKT--NTSGPASATKK-VFVANLNRDY-DEDAHRTALTEAFQEFGTIVGDIRL 266
Query: 373 IRHPHMRVGKGIAYVLFKT 391
+ KGI Y+ F+T
Sbjct: 267 PYNRESGALKGIGYIEFET 285
>gi|339238293|ref|XP_003380701.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
Length = 1241
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 30/178 (16%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
D K T+FV NL + K+ L + GE+ VR+ +
Sbjct: 683 DKSTKHANTVFVSNLDFALSKERLKDTMAEAGEVVDVRM------------------IML 724
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP----LYD 334
N +AY+ +K E S + AL + I G + + + + D P Y
Sbjct: 725 RPNRSKGYAYVDYKDEASVKKALKMDRRCIDGRPMYVSVCRGDVETGQQSDKPNSGFQYS 784
Query: 335 I---KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ K +FV N+P + E+ LF DL S VR++ H R KG+AYV F
Sbjct: 785 VGLEKNKLFVKNIPTFATENEVETLFRQYGDLRS----VRLVLHKSGR-SKGLAYVEF 837
>gi|444510365|gb|ELV09582.1| Nucleolin [Tupaia chinensis]
Length = 679
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG+D +T+ NLP+
Sbjct: 268 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGKDNKKDRDARTLLAKNLPY 320
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
V +E+ ++F E ++E +R+I KGIAY+ FKT
Sbjct: 321 KVTQDELKEVF------EDAME-IRIISKDGK--SKGIAYIEFKT 356
>gi|26325114|dbj|BAC26311.1| unnamed protein product [Mus musculus]
Length = 707
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 405 NITEDELKEVF------EDAME-IRLVSQDGKS--KGIAYIEFKS 440
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 94 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 132
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S + V+ RLD R P+K + + P+ K
Sbjct: 133 NTGRSRGFGFILFKESASVD-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 181
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+FVG L + +++I + F ++ES + + P +G ++ FK
Sbjct: 182 KIFVGGLNPEATEDKIREYFGDFGEIES----IELPMDPKTNKRRGFVFITFK 230
>gi|74179817|dbj|BAE36484.1| unnamed protein product [Mus musculus]
Length = 707
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 405 NITEDELKEVF------EDAME-IRLVSQDGKS--KGIAYIEFKS 440
>gi|344246933|gb|EGW03037.1| Heterogeneous nuclear ribonucleoprotein A/B [Cricetulus griseus]
Length = 211
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P + +G ++ +K
Sbjct: 93 EATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITYK 132
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 41/169 (24%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L F +G+I+S+ +++ P N
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDP-----------------NTGRSRG 96
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF +S + ++ N +I G + +A K +FVG L
Sbjct: 97 FAFIVFAKAESLDKIMSANDHIINGKKVDPKKAKARHGK--------------IFVGGLS 142
Query: 346 FDVKDEEIYQLFCGLN---DLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ DE+I F D+E + + R KG ++ F++
Sbjct: 143 TELSDEDIKNFFSQFGTIVDVEMPFDKTKNQR-------KGFCFITFES 184
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 40 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 82
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 83 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 131
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ +E+I + F + +EA+ + P +G ++ FK
Sbjct: 132 EATEEKIREYFGEFGE----IEAIELPMDPKTNKRRGFVFITFK 171
>gi|344244480|gb|EGW00584.1| Nucleolin [Cricetulus griseus]
Length = 479
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F+
Sbjct: 342 YVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSFN 394
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 395 ITEDELKEVF------EDALE-IRLVSQDGKS--KGIAYIEFKS 429
>gi|84875537|ref|NP_035010.3| nucleolin [Mus musculus]
gi|128843|sp|P09405.2|NUCL_MOUSE RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|12802527|gb|AAK07920.1|AF318184_1 nucleolin [Mus musculus]
gi|53454|emb|CAA30538.1| nucleolin [Mus musculus]
gi|26350437|dbj|BAC38858.1| unnamed protein product [Mus musculus]
gi|74179984|dbj|BAE36542.1| unnamed protein product [Mus musculus]
gi|74194436|dbj|BAE37270.1| unnamed protein product [Mus musculus]
gi|74201341|dbj|BAE26119.1| unnamed protein product [Mus musculus]
gi|148708278|gb|EDL40225.1| nucleolin, isoform CRA_f [Mus musculus]
Length = 707
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 405 NITEDELKEVF------EDAME-IRLVSQDGKS--KGIAYIEFKS 440
>gi|395539349|ref|XP_003771633.1| PREDICTED: RNA-binding protein 28 [Sarcophilus harrisii]
Length = 689
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
KTVF+ NL FD ++E++ ++ DL+ VR++ HP KG A+ F T+
Sbjct: 264 KTVFIRNLSFDSEEEDLEEILQQFGDLKY----VRIVLHPDTEHSKGCAFAQFMTQ 315
>gi|294866346|ref|XP_002764670.1| Nucleolin, putative [Perkinsus marinus ATCC 50983]
gi|239864360|gb|EEQ97387.1| Nucleolin, putative [Perkinsus marinus ATCC 50983]
Length = 717
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 22/142 (15%)
Query: 207 EDM--LVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIID 264
EDM L H + D + ++ T+FVGNLP++V ++ I++F F S+ I V +
Sbjct: 362 EDMEYLHHPYKPSMDKKPDIVHTLFVGNLPVEVTEQD-IRQF--FERDPSISIEQVAL-- 416
Query: 265 TKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA--FNMAVIGGNHIRLDRACPPR 322
R+G+ Q +A+I F + E +A +IG N +RLD A
Sbjct: 417 ----RRGSYKQM--------CYAHIRFAGDDDAEKVVAEFAGDKIIGRNRVRLDWAQDKH 464
Query: 323 KKLKGEDAPLYDIKKTVFVGNL 344
++K ++ L +++GNL
Sbjct: 465 MQVK-KNEYLRGATPRIYIGNL 485
>gi|13529464|gb|AAH05460.1| Nucleolin [Mus musculus]
Length = 707
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 405 NITEDELKEVF------EDAME-IRLVSQDGKS--KGIAYIEFKS 440
>gi|449301882|gb|EMC97891.1| hypothetical protein BAUCODRAFT_31906 [Baudoinia compniacensis UAMH
10762]
Length = 363
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 176 YVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPL 235
++EK+ I +++E +K GE K+ N T+D + G T+FVG L
Sbjct: 60 WLEKRDRRILEKQEHQKYLTGEGAKELYNPTKDENI---------TGDAFSTLFVGRLSY 110
Query: 236 KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI-LQKQINENADSVHAYIVFKSE 294
K L +EF +FG I +R+ + D K + QK+ +A++VF+ E
Sbjct: 111 DTDVKDLQREFGRFGPIARIRV----VQDNGGSEKDSTRRQKKSRRGMSRGYAFVVFEQE 166
Query: 295 QSTEAAL-AFNMAVIGGNHIRLD 316
+ +AA + VI G + +D
Sbjct: 167 RHMKAAYKETDHLVIRGRKVLVD 189
>gi|74177681|dbj|BAE38940.1| unnamed protein product [Mus musculus]
Length = 707
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 405 NITEDELKEVF------EDAME-IRLVSQDGK--SKGIAYIEFKS 440
>gi|128842|sp|P08199.2|NUCL_MESAU RecName: Full=Nucleolin; AltName: Full=Protein C23
Length = 714
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 351 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 403
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 404 NITEDELKEVF------EDALE-IRLVSQDGKS--KGIAYIEFKS 439
>gi|223647556|gb|ACN10536.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 344
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 37/175 (21%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G +D GK+ FVG L KK L F KFGE+ I+ +D + R
Sbjct: 76 GEEDAGKM----FVGGLSWDTSKKDLKDYFSKFGEVTDCTIK----MDQQTGRSRGF--- 124
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDI 335
+I+FK S + L RLD R P+K + + P+
Sbjct: 125 ----------GFILFKEAVSVDKVLE-------QKEHRLDGRQIDPKKAMAMKKEPV--- 164
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
K +FVG L D E I + F ++E+ + + + P +G ++ +K
Sbjct: 165 -KKIFVGGLNPDTDKEVIQEYFGTFGEIET----IELPQDPKTEKRRGFVFITYK 214
>gi|145245531|ref|XP_001395033.1| RNA binding protein Rnp24 [Aspergillus niger CBS 513.88]
gi|134079736|emb|CAK40874.1| unnamed protein product [Aspergillus niger]
Length = 371
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I++GNLP K + K F + I +P+ G K N+ A
Sbjct: 75 IWIGNLPFFATKDDVRKFFTT-----NCSFTDTTITRIHMPKSGDKHGKAQNKG----FA 125
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRA-----CPPRKKLKGEDAPLYDIK-----K 337
Y+ F ++++ + A+ + ++ G + + A P + + +G++A K
Sbjct: 126 YVDFSTQKACQEAMGLSEQLLTGRRVLIKDAKNFSGRPEKPQGEGQNANSGAASGNPPSK 185
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+FVGNL FD E I + F CG ++ V V KG A+V+F
Sbjct: 186 RIFVGNLGFDATKELIEEHFSQCG------TIANVHVATFQDSGKCKGYAWVVF 233
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ L + F++ G P+ + +P+ Q +
Sbjct: 30 TVYVGNLDPQVTEEVLWELFLQAG----------PVTNVYVPKDRVTSTHQ-------GY 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E+ E + NM + G I+++++ R+ ++ +F+GNL
Sbjct: 73 GFVEFRNEEDAEYGIKILNMVKLFGKPIKVNKSVGDRRD---------EVGANLFIGNLD 123
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D+ ++ +Y F + + +++R P KG +V + +
Sbjct: 124 PDIDEKLLYDTFSAFGVV---INTPKIMRDPDNGASKGFGFVAYDS 166
>gi|449681524|ref|XP_002157695.2| PREDICTED: splicing factor 3B subunit 4-like [Hydra magnipapillata]
Length = 328
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ +I F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 13 YGFIEFMSEEDADYAIKILNMIKVYGKPIRVNKASAHNKNL--------DVGANIFIGNL 64
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D+ ++ +Y F + + +++R P KG A++ F +
Sbjct: 65 DPDIDEKLLYDTFSAFGVI---LTTPKIMRDPETGNSKGFAFINFAS 108
>gi|74214426|dbj|BAE40448.1| unnamed protein product [Mus musculus]
gi|74219790|dbj|BAE40485.1| unnamed protein product [Mus musculus]
Length = 707
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 405 NITEDELKEVF------EDAME-IRLVSQDGKS--KGIAYIEFKS 440
>gi|403263354|ref|XP_003924002.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Saimiri boliviensis boliviensis]
Length = 336
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 30/147 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+DEGK+ F+G L KK L F KFGE+ ++ PI
Sbjct: 75 EDEGKM----FIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPIT--------------- 115
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+++FK +S + + + G I P R K P+ K
Sbjct: 116 --GRSRGFGFVLFKESESVDKVMDQKEHKLNGKVID-----PKRAKAMKTKEPV----KK 164
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLES 365
+FVG L D +E+I + F G ++ES
Sbjct: 165 IFVGGLSPDTPEEKIREYFGGFGEVES 191
>gi|74001707|ref|XP_535627.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Canis lupus familiaris]
Length = 336
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 30/147 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+DEGK+ F+G L KK L F KFGE+ ++ PI
Sbjct: 75 EDEGKM----FIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPIT--------------- 115
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+++FK +S + + + G I P R K P+ K
Sbjct: 116 --GRSRGFGFVLFKESESVDKVMDQKEHKLNGKVID-----PKRAKAMKTKEPV----KK 164
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLES 365
+FVG L D +E+I + F G ++ES
Sbjct: 165 IFVGGLSPDTPEEKIREYFGGFGEVES 191
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 27/170 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
++IFVG L V + L +EF GE+ S R+ Q N
Sbjct: 314 KSIFVGRLSWNVDNEWLAQEFADCGEVVSARV-----------------QMDRNTGKSRG 356
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP--PRKKLKGEDAPLYD----IKKTV 339
AY+ F + ++ +AAL I G + +D P + A D +
Sbjct: 357 FAYVTFATAEAAQAALQLTGKEIDGRPVNIDMTTERDPNAARQNRAAAYGDKPSEPSAVL 416
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
FVGNL F ++ +++ F D++S VRV KG AYV F
Sbjct: 417 FVGNLSFSATEDLLWETFSEYGDVKS----VRVPTDRETGSPKGFAYVEF 462
>gi|350631729|gb|EHA20100.1| hypothetical protein ASPNIDRAFT_39511 [Aspergillus niger ATCC 1015]
Length = 371
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I++GNLP K + K F + I +P+ G K N+ A
Sbjct: 75 IWIGNLPFFATKDDVRKFFTT-----NCSFTDTTITRIHMPKSGDKHGKAQNKG----FA 125
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRA-----CPPRKKLKGEDAPLYDIK-----K 337
Y+ F ++++ + A+ + ++ G + + A P + + +G++A K
Sbjct: 126 YVDFSTQKACQEAMGLSEQLLTGRRVLIKDAKNFSGRPEKPQGEGQNANSGAASGNPPSK 185
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+FVGNL FD E I + F CG ++ V V KG A+V+F
Sbjct: 186 RIFVGNLGFDATKELIEEHFSQCG------TIANVHVATFQDSGKCKGYAWVVF 233
>gi|148708275|gb|EDL40222.1| nucleolin, isoform CRA_c [Mus musculus]
Length = 608
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+S + E AL + GN I+L+ K KG D+ +T+ NL F
Sbjct: 352 GYVDFESAEDLEKALELTGLKVFGNEIKLE-------KPKGRDSKKVRAARTLLAKNLSF 404
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
++ ++E+ ++F E ++E +R++ KGIAY+ FK+
Sbjct: 405 NITEDELKEVF------EDAME-IRLVSQDGK--SKGIAYIEFKS 440
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 30/147 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+DEGK+ F+G L KK L F KFGE+ ++ PI
Sbjct: 75 EDEGKM----FIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPIT--------------- 115
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+++FK +S + + + G I P R K P+ K
Sbjct: 116 --GRSRGFGFVLFKESESVDKVMDQKEHKLNGKVID-----PKRAKAMKTKEPV----KK 164
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLES 365
+FVG L D +E+I + F G ++ES
Sbjct: 165 IFVGGLSPDTPEEKIREYFGGFGEVES 191
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.131 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,921,694,428
Number of Sequences: 23463169
Number of extensions: 253237956
Number of successful extensions: 1114967
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 6341
Number of HSP's that attempted gapping in prelim test: 1058973
Number of HSP's gapped (non-prelim): 38021
length of query: 393
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 249
effective length of database: 8,980,499,031
effective search space: 2236144258719
effective search space used: 2236144258719
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)