BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016235
(393 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 150/252 (59%), Gaps = 11/252 (4%)
Query: 84 LLQNRMLETK-KAALQDSSKFKALARQARNESL-WYGEERPRWLGPIPYDYPSYLTGELP 141
L+ NR L K +AA + + + A A++ + WYG +R +WLGP + P+YLTGE P
Sbjct: 5 LISNRALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFP 64
Query: 142 GDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRV 201
GDYG+D AGLS DP F+KY E++HARWA+LGALG L PE+L EPVW++
Sbjct: 65 GDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKA 124
Query: 202 GYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPG 261
G LDYLG P L A Q ++ Q +LM E R G A E L PG
Sbjct: 125 GAQIFSEGGLDYLGSPALIHA--QNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPG 182
Query: 262 DINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLD 321
+ FDPL L+ DP F ELKVKEIKNGRLAM + GF++QA TGKGP+QNL D
Sbjct: 183 ES-------FDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLAD 235
Query: 322 HISDPLHNNLLS 333
H++DP NN +
Sbjct: 236 HLADPGTNNAFA 247
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 215 bits (548), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 142/218 (65%), Gaps = 10/218 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAIWA 162
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
CQ +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 CQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 293 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
NGRLAM + GF++QA TGKGP++NL DHI+DP+ NN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 214 bits (545), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 147/227 (64%), Gaps = 10/227 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
KA+A+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP AF
Sbjct: 155 -QSILAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAF 206
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 150/249 (60%), Gaps = 16/249 (6%)
Query: 85 LQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDY 144
L+ R +K + D +A +S+WYG +RP++LGP PSYLTGE PGDY
Sbjct: 17 LKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDY 76
Query: 145 GFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYS 204
G+D AGLS DP F K E++H+RWAMLGALG + PE+L G E VW++ G
Sbjct: 77 GWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGV-QFGEAVWFKAGAQ 135
Query: 205 KLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCG---IEALEPLGIFLPG 261
LDYLG P +L +Q ++ I Q +LM E R G E L+PL
Sbjct: 136 IFSEGGLDYLGNP--NLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPL------ 187
Query: 262 DINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLD 321
YPGGA FDPL L+ DP AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL D
Sbjct: 188 ---YPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 243
Query: 322 HISDPLHNN 330
HI+DP+ NN
Sbjct: 244 HIADPVANN 252
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 162/271 (59%), Gaps = 20/271 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
PF A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PF-AGKAVKLSPSSSEVTGNGKVTMRKTANK--------AKPVSSGSPWYGPDRVKYLGP 61
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 62 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYC 247
G E VW++ G LDYLG P L A Q ++ I CQ +LM E R
Sbjct: 122 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRVA 178
Query: 248 GIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ 307
G EPLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM + GF++Q
Sbjct: 179 G----EPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 231
Query: 308 AAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
A TGKGP++NL DH++DP++NN S +
Sbjct: 232 ALVTGKGPLENLADHLADPVNNNAWSYATNF 262
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCVFPEILSKNGV-TFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 162
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 AQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 293 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
NGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANN 253
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/272 (46%), Positives = 162/272 (59%), Gaps = 20/272 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYG 118
A + S+ F A KA+ SP E+ N + +K A + A+ + S WYG
Sbjct: 3 ASTMALSSSSF-AGKAVKLSPSSSEITGNGKVTMRKTASK--------AKPVSSSSPWYG 53
Query: 119 EERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALG 178
R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 54 PNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 179 ALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
+ PE+L G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 CVFPELLARNGV-KFGEAVWFKGGSQIFSQGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Query: 239 VGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAM 298
E R G EPLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM
Sbjct: 171 GAVEGYRVAG----EPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAM 223
Query: 299 VAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
+ GF++QA TGKGP++NL DH++DP++NN
Sbjct: 224 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/260 (47%), Positives = 157/260 (60%), Gaps = 19/260 (7%)
Query: 72 AVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPY 130
A KA+ SP E+ N + +K A + A+ A + S WYG +R ++LGP
Sbjct: 14 AGKAVKLSPSSSEITGNGRVTMRKTATK--------AKPASSGSPWYGPDRVKYLGPFSG 65
Query: 131 DYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGA 190
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L G
Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125
Query: 191 FHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIE 250
E VW++ G LDYLG P L A Q ++ I CQ +LM E R G
Sbjct: 126 -KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRIAG-- 180
Query: 251 ALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAF 310
PLG + D YPGG+ FDPL L+ DP AF ELKVKEIKNGRLAM + GF++QA
Sbjct: 181 --GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 235
Query: 311 TGKGPVQNLLDHISDPLHNN 330
TGKGP++NL DH++DP++NN
Sbjct: 236 TGKGPLENLADHLADPVNNN 255
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ +
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAVWA 162
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 SQVVLMGLIEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 293 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
NGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 253
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 211 bits (537), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 158/263 (60%), Gaps = 19/263 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
P A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PSFAGKAVKLSPSSSEITGNGKVTMRKTASK--------AKTVSSGSPWYGPDRVKYLGP 62
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 63 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYC 247
G E VW++ G LDYLG P L A Q ++ I CQ +LM E R
Sbjct: 123 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRVA 179
Query: 248 GIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ 307
G PLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM + GF++Q
Sbjct: 180 G----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 232
Query: 308 AAFTGKGPVQNLLDHISDPLHNN 330
A TGKGP++NL DH++DP++NN
Sbjct: 233 AIVTGKGPLENLADHLADPVNNN 255
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 211 bits (537), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 140/217 (64%), Gaps = 10/217 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 47 SIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I C
Sbjct: 107 LGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWAC 163
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIKN
Sbjct: 164 QVVLMGFVEGYRVGG----GPLGEGL--DPIYPGGA-FDPLGLADDPDAFAELKVKEIKN 216
Query: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
GRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 211 bits (537), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 136/224 (60%), Gaps = 8/224 (3%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
R LWYG +R ++LGP PSYL GE PGDYG+D AGLS DP AF + E+
Sbjct: 41 GRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEV 100
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PEVL EPVW++ G LDYLG P +L +Q
Sbjct: 101 IHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHAQS 158
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ + Q LLM E R G++ + G+ YPGG FDPL L+ DPV F EL
Sbjct: 159 ILAVLGFQVLLMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLGLADDPVTFAEL 212
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
KVKEIKNGRLAM + GF++QA TGKGP++NL DH+ DP+ NN
Sbjct: 213 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 144/227 (63%), Gaps = 10/227 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
+ +++ A ++++WYG +RP++LGP + PSYL GE GDYG+D AGLS DP F +
Sbjct: 40 RTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRE 99
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++HARWAMLGALG L PE+L G E VW++ G LDYLG P L A
Sbjct: 100 LEVIHARWAMLGALGCLTPELLAKSG-VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA- 157
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I CQ +LM E R G PLG D YPGG+ FDPL L+ DP F
Sbjct: 158 -QSILAIWACQVVLMGAVEGYRVAG----GPLGEVT--DPIYPGGS-FDPLGLADDPDTF 209
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 210 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 256
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 145/227 (63%), Gaps = 10/227 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
K +A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP AF
Sbjct: 155 -QSILAIWACQVILMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAF 206
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 161/271 (59%), Gaps = 20/271 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
PF A KA+ SP E+ N + +K A + A+ + S WYG +R ++LGP
Sbjct: 11 PF-AGKAVKLSPSSSEVTGNGKVTMRKTASK--------AKPVSSGSPWYGPDRVKYLGP 61
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L
Sbjct: 62 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYC 247
G E VW++ G LDYLG P L A Q ++ I CQ +LM E R
Sbjct: 122 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRVA 178
Query: 248 GIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ 307
G PLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM + GF++Q
Sbjct: 179 G----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 231
Query: 308 AAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
A TGKGP++NL DH++DP++NN S +
Sbjct: 232 AIVTGKGPLENLADHLADPVNNNAWSYATNF 262
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 138/224 (61%), Gaps = 8/224 (3%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
AR + LWYG +R ++LGP PSYL GE PGDYG+D AGLS DP AF K E+
Sbjct: 38 ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV 97
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PEVL+ EPVW++ G LDYLG P +L +Q
Sbjct: 98 IHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNP--NLVHAQS 155
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ + Q +LM E R G+ + G+ YPGG FDPL L+ DP F EL
Sbjct: 156 ILAVLGFQVVLMGLVEGFRINGLPGVG------EGNDLYPGGQYFDPLGLADDPTTFAEL 209
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
KVKEIKNGRLAM + GF++QA TGKGP++NLLDH+ +P+ NN
Sbjct: 210 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 18 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 77
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 78 MLGALGCVFPEILSKNGV-TFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 134
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 135 SQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 187
Query: 293 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
NGRLAM + GF++QA TGKGP++NL DHI+DP+ NN
Sbjct: 188 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANN 225
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/259 (47%), Positives = 156/259 (60%), Gaps = 18/259 (6%)
Query: 72 AVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYD 131
A KA+ N P L+ + + +K A A A+Q + S WYG +R +LGP+ +
Sbjct: 14 AGKAVKNLPSSALIGDARVNMRKTA--------AKAKQVSSSSPWYGSDRVLYLGPLSGE 65
Query: 132 YPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAF 191
PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG + PE+L G
Sbjct: 66 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV- 124
Query: 192 HLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEA 251
E W++ G LDYLG P L A Q ++ I CQ +LM E R G
Sbjct: 125 KFGEAGWFKAGSQIFSDGGLDYLGNPSLVHA--QSLLAIWACQVVLMGAVEGYRIAG--- 179
Query: 252 LEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFT 311
PLG + D YPGG+ FDPL L++ P AF ELKVKEIKNGRLAM + GF++QA T
Sbjct: 180 -GPLGEIV--DPLYPGGS-FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 312 GKGPVQNLLDHISDPLHNN 330
GKGP+++L DHI+DP++NN
Sbjct: 236 GKGPLEDLADHIADPVNNN 254
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 158/279 (56%), Gaps = 18/279 (6%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGE 119
A + S+ F +S E+ N + +K + A+ A + S WYG
Sbjct: 3 ATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTK--------AKPASSSSPWYGP 54
Query: 120 ERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGA 179
+R ++LGP + PSYLTGE P DYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 55 DRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 114
Query: 180 LVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMV 239
+ PE+ G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 115 VFPELFARNG-IKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMG 171
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
E R G PLG + D YPGG+ FDPL L++DP AF ELKVKEIKNGRLAM
Sbjct: 172 AVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMF 224
Query: 300 AWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
+ GF++QA TGKGP++NL DH++DP++NN S +
Sbjct: 225 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 263
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 141/221 (63%), Gaps = 16/221 (7%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
ES+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H+RWA
Sbjct: 46 ESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 105
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG PE+L+ G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCTFPELLEKNGV-KFGEAVWFKAGSQIFAEGGLDYLGNP--NLIHAQSILAIWA 162
Query: 233 CQALLMVGPECARYCG---IEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 289
Q +LM E R G E L+PL YPGGA FDPL L+ DP +F ELKVK
Sbjct: 163 TQVVLMGFVEGYRVGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDSFAELKVK 212
Query: 290 EIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
E+KNGRLAM + GF++QA TGKGP+QNL DH++DP+ NN
Sbjct: 213 ELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 151/248 (60%), Gaps = 13/248 (5%)
Query: 86 QNRMLETKKAALQDSSKF---KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPG 142
Q L +Q ++KF K ++ + S WYG +R ++LGP + PSYLTGE PG
Sbjct: 6 QAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 65
Query: 143 DYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVG 202
DYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G E VW++ G
Sbjct: 66 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAG 124
Query: 203 YSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGD 262
LDYLG P L A Q ++ I CQ +LM E R G PLG D
Sbjct: 125 SQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRIAG----GPLGEVT--D 176
Query: 263 INYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDH 322
YPGG+ FDPL L+ DP AF ELKVKE+KNGRLAM + GF++QA TGKGP++NL DH
Sbjct: 177 PIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 235
Query: 323 ISDPLHNN 330
++DP++NN
Sbjct: 236 LADPVNNN 243
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 208 bits (529), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 140/218 (64%), Gaps = 10/218 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H+RWA
Sbjct: 44 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 104 MLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNP--NLVHAQSILAIWA 160
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
Q +LM E R G PLG L D YPGGA FDPL L+ DP F ELKVKE+K
Sbjct: 161 VQVVLMGFVEGYRVGG----GPLGEGL--DKVYPGGA-FDPLGLADDPDTFAELKVKELK 213
Query: 293 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
NGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 214 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 208 bits (529), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 140/218 (64%), Gaps = 10/218 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H+RWA
Sbjct: 44 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 104 MLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNP--NLVHAQSILAIWA 160
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
Q +LM E R G PLG L D YPGGA FDPL L+ DP F ELKVKE+K
Sbjct: 161 VQVVLMGFVEGYRVGG----GPLGEGL--DKVYPGGA-FDPLGLADDPDTFAELKVKELK 213
Query: 293 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
NGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 214 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 208 bits (529), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/261 (46%), Positives = 153/261 (58%), Gaps = 19/261 (7%)
Query: 73 VKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDY 132
V+ AN EL R K A + + A + S WYG +R ++LGP +
Sbjct: 18 VETSANPSSQELGGARFTMRKSATTK---------KVASSGSPWYGPDRVKYLGPFSGES 68
Query: 133 PSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFH 192
PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G
Sbjct: 69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGV-K 127
Query: 193 LVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEAL 252
E VW++ G LDYLG P L A Q ++ I Q +LM E R G
Sbjct: 128 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWATQVILMGAVEGYRIAG---- 181
Query: 253 EPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTG 312
PLG + D YPGG+ FDPL L+ DP AF ELKVKE+KNGRLAM + GF++QA TG
Sbjct: 182 GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 238
Query: 313 KGPVQNLLDHISDPLHNNLLS 333
KGP++NL DH+SDP++NN S
Sbjct: 239 KGPLENLADHLSDPVNNNAWS 259
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 207 bits (528), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/261 (46%), Positives = 156/261 (59%), Gaps = 11/261 (4%)
Query: 71 TAVKAIANSPLGELLQN-RMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIP 129
T+ A+ ++ G+ L+ L K A + + A +A + S+WYG +RP +LGP
Sbjct: 3 TSTAALTSTFSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFS 62
Query: 130 YDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVG 189
PSYL+GE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+L G
Sbjct: 63 GSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 122
Query: 190 AFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGI 249
E VW++ G LDYLG P L A Q ++ I CQ +LM E R G
Sbjct: 123 V-KFGEAVWFKAGSQIFAEGGLDYLGNPSLVHA--QSILAIWACQVILMGAVEGYRVAG- 178
Query: 250 EALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAA 309
PLG D YPGG+ FDPL L+ DP AF ELKVKE+KNGRLAM + GF++QA
Sbjct: 179 ---GPLGEVE--DPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAI 232
Query: 310 FTGKGPVQNLLDHISDPLHNN 330
TGKGP++NL DH++DP NN
Sbjct: 233 VTGKGPIENLSDHLADPAVNN 253
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 207 bits (528), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 142/223 (63%), Gaps = 10/223 (4%)
Query: 108 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 167
+ ++ S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 43 KTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
Query: 168 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 227
H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 103 HCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSI 159
Query: 228 IVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELK 287
+ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELK
Sbjct: 160 LAIWACQVILMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELK 212
Query: 288 VKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
VKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 213 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 207 bits (528), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 141/227 (62%), Gaps = 10/227 (4%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 101
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PE+ G E VW + G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELFARNGV-KFGEAVWLKAGSQIFSEGGLDYLGNPSLVHA--QS 158
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ I CQ LLM E R G PLG+ + D YPGG+ FDPL L++DP AF EL
Sbjct: 159 ILAIWACQVLLMGAVEGYRVAG----GPLGVVV--DPLYPGGS-FDPLGLAEDPEAFAEL 211
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLS 333
KVKE KNGRLAM + GF+IQA TGKGP++NL DH+ DP++NN S
Sbjct: 212 KVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWS 258
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/280 (44%), Positives = 162/280 (57%), Gaps = 20/280 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYG 118
A + S+ F A KA+ SP E+ N + +K + A+ + S WYG
Sbjct: 3 AATMALSSSSF-AGKAVKLSPSSSEITGNGKVTMRKTVTK--------AKPLSSGSPWYG 53
Query: 119 EERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALG 178
+R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAMLGALG
Sbjct: 54 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 179 ALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLM 238
+ PE+L G E VW++ G LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 CVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLM 170
Query: 239 VGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAM 298
E R G PLG + D YPGG+ FDPL L++DP AF ELKVK IKNGRLAM
Sbjct: 171 GAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAELKVKHIKNGRLAM 223
Query: 299 VAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
+ GF++QA TGKGP++NL DH++DP++NN S +
Sbjct: 224 FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 263
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 143/223 (64%), Gaps = 10/223 (4%)
Query: 108 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 167
+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 38 KVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 97
Query: 168 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 227
H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 98 HSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSI 154
Query: 228 IVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELK 287
+ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELK
Sbjct: 155 LAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELK 207
Query: 288 VKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
VKE+KNGRLAM + GF++QA TGKGP++NL DHI+DP++NN
Sbjct: 208 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 250
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 141/224 (62%), Gaps = 10/224 (4%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 101
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 158
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ I CQ +LM E R G PLG D YPGG+ FDPL L+ DP AF EL
Sbjct: 159 ILAIWACQVVLMGAIEGYRVAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAEL 211
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
KVKEIKNGRLAM + GF++QA TGKGP+ NL+DH++DP++NN
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNN 255
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 141/224 (62%), Gaps = 10/224 (4%)
Query: 107 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 166
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 41 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
Query: 167 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 226
+H RWAMLGALG + PE+ G E VW++ G LDYLG P L A Q
Sbjct: 101 IHCRWAMLGALGCVFPELFARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 157
Query: 227 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 286
++ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF EL
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLADDPEAFAEL 210
Query: 287 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
KVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 211 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 158/271 (58%), Gaps = 19/271 (7%)
Query: 60 AGVLVFSAIPFTAVKAIANSPLGELLQNRMLETKKAALQDSSKFKALARQARNESLWYGE 119
A + S+ F A KA+ E+ +N + +K + A+ + S WYG
Sbjct: 3 AATMALSSSSF-AGKAVNVPSSSEITRNGKVTMRKTVTK--------AKPVSSGSPWYGP 53
Query: 120 ERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGA 179
+R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RW MLGALG
Sbjct: 54 DRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGC 113
Query: 180 LVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMV 239
+ PE+ G E VW++ G + LDYLG P L A Q ++ I CQ +LM
Sbjct: 114 VFPELFARNGV-KFGEAVWFKAGSQIFKEGGLDYLGNPSLVHA--QSILAIWACQVVLMG 170
Query: 240 GPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMV 299
E R G PLG + D YPGG+ FDPL L+ DP AF EL+VKEIKNGRLAM
Sbjct: 171 AVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLADDPEAFAELEVKEIKNGRLAMF 223
Query: 300 AWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
+ GF++QA TGKGP++NL DH++DP++NN
Sbjct: 224 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 156/271 (57%), Gaps = 19/271 (7%)
Query: 69 PFTAVKAIANSPLG-ELLQNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGP 127
P A KA+ SP E+ N +K + A+ + S WYG +R ++LGP
Sbjct: 11 PSFAGKAVKFSPSSSEITGNGKATMRKTVTK--------AKPVSSGSPWYGPDRVKYLGP 62
Query: 128 IPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDM 187
+ PSYLTGE PGDYG+D A LS DP F K E++H RWAMLGALG + PE+L
Sbjct: 63 FSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122
Query: 188 VGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYC 247
G E VW++ G LDYLG P L A Q ++ I CQ +LM E R
Sbjct: 123 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRVA 179
Query: 248 GIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQ 307
G PLG + D YPGG+ FDPL L+ DP AF ELKVKEIKNGRLAM + GF++Q
Sbjct: 180 G----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 232
Query: 308 AAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
A TGKGP++NL DH++DP++NN S +
Sbjct: 233 AIVTGKGPLENLADHLADPVNNNAWSYATNF 263
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 205 bits (521), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 144/231 (62%), Gaps = 10/231 (4%)
Query: 108 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 167
+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 45 KVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVI 104
Query: 168 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 227
H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 105 HSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSI 161
Query: 228 IVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELK 287
+ I Q +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELK
Sbjct: 162 LAIWATQVILMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELK 214
Query: 288 VKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
VKE+KNGRLAM + GF++QA TGKGP++NL DH++DP++NN S +
Sbjct: 215 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 265
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 138/218 (63%), Gaps = 10/218 (4%)
Query: 113 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 172
+S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWA
Sbjct: 59 DSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 173 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 232
MLGALG + PE+L G E VW++ G LDYLG P L +Q ++ I
Sbjct: 119 MLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGSP--QLIHAQSILAIWA 175
Query: 233 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 292
CQ +LM E R G PLG D YPGG FDPL L+ DP AF ELKVKEIK
Sbjct: 176 CQVILMGAIEGYRVAG----GPLGEVT--DPIYPGGN-FDPLGLADDPDAFAELKVKEIK 228
Query: 293 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
NGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 229 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 141/221 (63%), Gaps = 10/221 (4%)
Query: 110 ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHA 169
A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H+
Sbjct: 43 ASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 102
Query: 170 RWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIV 229
RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q ++
Sbjct: 103 RWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILA 159
Query: 230 IAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 289
I Q +LM E R G PLG + D YPGGA FDPL L+ DP AF ELKVK
Sbjct: 160 IWAVQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGA-FDPLGLADDPEAFAELKVK 212
Query: 290 EIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
EIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 139/219 (63%), Gaps = 10/219 (4%)
Query: 112 NESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARW 171
+ S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RW
Sbjct: 54 STSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRW 113
Query: 172 AMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIA 231
AMLGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 114 AMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QSILAIW 170
Query: 232 ICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEI 291
CQ +LM E R G PLG D YPGG+ FDPL L++DP AF ELKVKEI
Sbjct: 171 ACQVILMGAVEGYRIAG----GPLGEVT--DPIYPGGS-FDPLGLAEDPEAFAELKVKEI 223
Query: 292 KNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
KNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 224 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 144/229 (62%), Gaps = 10/229 (4%)
Query: 102 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 161
K A + A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 31 KSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 90
Query: 162 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 221
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 91 RELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIH 149
Query: 222 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 281
A Q ++ I Q +LM E R G PLG + D YPGG+ FDPL L+ DP
Sbjct: 150 A--QSILAIWAVQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPE 200
Query: 282 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 201 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 249
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 142/227 (62%), Gaps = 10/227 (4%)
Query: 104 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 163
K + +Q + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 35 KTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 164 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 223
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 95 LEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA- 152
Query: 224 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 283
Q ++ I Q +LM E R G PLG D YPGG+ FDPL L+ DP AF
Sbjct: 153 -QSILAIWATQVILMGAVEGYRIAG----GPLGEVT--DPIYPGGS-FDPLGLADDPEAF 204
Query: 284 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
ELKVKE+KNGRLAM + GF++QA TGKGP++NL DH++ P++NN
Sbjct: 205 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNN 251
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 143/230 (62%), Gaps = 13/230 (5%)
Query: 104 KALARQ---ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQK 160
KA R+ A +S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 47 KATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 106
Query: 161 YFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLH 220
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P
Sbjct: 107 NRELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGSP--Q 163
Query: 221 LAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDP 280
L +Q ++ I CQ +LM E R G PLG D YPGG FDPL L+ DP
Sbjct: 164 LIHAQSILAIWACQVILMGAIEGYRVAG----GPLGEVT--DPIYPGGN-FDPLGLADDP 216
Query: 281 VAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
AF ++KVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 217 DAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 137/217 (63%), Gaps = 10/217 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 46 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAM 105
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G L YLG P L A Q ++ I C
Sbjct: 106 LGALGCVFPELLARNGV-KFGEAVWFKKGSQIFSEGGLQYLGNPSLVHA--QSILAIWAC 162
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG + D YPGG+ FDPL L+ D AF ELKVKEIKN
Sbjct: 163 QVVLMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLADDAEAFAELKVKEIKN 215
Query: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 201 bits (511), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 144/248 (58%), Gaps = 17/248 (6%)
Query: 86 QNRMLETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYG 145
Q L K Q + R A ES+WYG +RP++LGP PSYLTGE PGDYG
Sbjct: 21 QQNELVKKVGTAQARITMRRTVRSAP-ESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYG 79
Query: 146 FDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSK 205
+D A +S DP F K E++H RWAMLGALG + PE+L G E VW++ G
Sbjct: 80 WDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNG-LKFGEAVWFKAGAQI 138
Query: 206 LQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCG---IEALEPLGIFLPGD 262
LDY G P +L +Q ++ I CQ +LM E R G E L+PL
Sbjct: 139 FSEGGLDYAGNP--NLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPL------- 189
Query: 263 INYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDH 322
PGGA FDPL L+ DP A ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH
Sbjct: 190 --LPGGA-FDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH 246
Query: 323 ISDPLHNN 330
++DP+ NN
Sbjct: 247 LADPVANN 254
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 138/217 (63%), Gaps = 9/217 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H RWAM
Sbjct: 47 SPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILAIWAT 163
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKEIKN
Sbjct: 164 QVILMGAVEGYRVAG---EGPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKEIKN 217
Query: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 139/217 (64%), Gaps = 10/217 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILAIWAC 163
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELKVKE+K
Sbjct: 164 QVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFGELKVKELKK 216
Query: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
GRLAM++ GF++QA TGKGP++NL DHI+DP++NN
Sbjct: 217 GRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNN 253
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 139/217 (64%), Gaps = 10/217 (4%)
Query: 114 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 173
S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 174 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 233
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILAIWAC 163
Query: 234 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 293
Q +LM E R G PLG + D YPGG FDPL L+ DP AF ++KVKE+KN
Sbjct: 164 QVVLMGAIEGYRVAG----GPLGEVV--DPLYPGGT-FDPLGLADDPEAFADVKVKELKN 216
Query: 294 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 330
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 142/250 (56%), Gaps = 18/250 (7%)
Query: 95 AALQDSSKFKALA-RQARNESL---------WYGEERPRWLGPIP-YDYPSYLTGELPGD 143
AAL S KAL RQ R + + +YG +R ++LGP D P YLTGE PGD
Sbjct: 2 AALIARSGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGD 61
Query: 144 YGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGY 203
YG+D AGLS DP F +Y E++HARWA+LGALG L PE+L EPVW++ G
Sbjct: 62 YGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGA 121
Query: 204 SKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDI 263
L+YLG L A Q +I Q +LM E R G G D
Sbjct: 122 QIFADGGLNYLGNESLIHA--QSIIATLAVQVVLMGLAEAYRANGGSE----GFLDDLDT 175
Query: 264 NYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHI 323
YPGG FDPL L+ DP F ELKVKEIKNGRLAM + LGF++QA TGKGPVQNL DH+
Sbjct: 176 LYPGGP-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHL 234
Query: 324 SDPLHNNLLS 333
+DP N +
Sbjct: 235 ADPTVNKAFA 244
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 199 bits (506), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 155/266 (58%), Gaps = 28/266 (10%)
Query: 69 PFTAVKAIANSPLG-ELLQN---RMLETKKAALQDSSKFKALARQARNESLWYGEERPRW 124
P A KA+ +P EL N M +T KA + DS WYG +R ++
Sbjct: 11 PALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDSP--------------WYGPDRVKY 56
Query: 125 LGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEV 184
LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAMLGALG + PE+
Sbjct: 57 LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 116
Query: 185 LDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECA 244
L G E VW++ G LDYLG P L A Q ++ I Q +LM E
Sbjct: 117 LARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILSIWATQVILMGAVEGY 173
Query: 245 RYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGF 304
R G PLG + D YPGG+ FDPL L++DP ELKVKE+KNGRLAM + GF
Sbjct: 174 RVAG----GPLGEIV--DPLYPGGS-FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGF 226
Query: 305 YIQAAFTGKGPVQNLLDHISDPLHNN 330
++QA TGKGP++NL DH++DP++NN
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNN 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,737,517
Number of Sequences: 539616
Number of extensions: 6519468
Number of successful extensions: 14112
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 13667
Number of HSP's gapped (non-prelim): 150
length of query: 393
length of database: 191,569,459
effective HSP length: 119
effective length of query: 274
effective length of database: 127,355,155
effective search space: 34895312470
effective search space used: 34895312470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)