Query 016236
Match_columns 392
No_of_seqs 119 out of 1326
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:12:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016236.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016236hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 3.3E-92 1.1E-96 730.1 35.4 389 1-392 121-514 (546)
2 1kp8_A Groel protein; chaperon 100.0 3E-91 1E-95 724.3 39.0 391 1-392 121-516 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 7.1E-90 2.4E-94 714.6 42.6 391 1-392 121-518 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 4.6E-91 1.6E-95 723.2 31.2 392 1-392 122-518 (545)
5 3p9d_C T-complex protein 1 sub 100.0 3E-74 1E-78 601.3 24.5 367 1-392 127-579 (590)
6 3ruv_A Chaperonin, CPN; double 100.0 8.6E-72 3E-76 580.1 35.0 337 1-392 126-512 (543)
7 3iyg_H T-complex protein 1 sub 100.0 1.4E-71 4.7E-76 575.3 36.0 340 1-392 118-507 (515)
8 3ko1_A Chaperonin; 9-fold symm 100.0 1.1E-71 3.7E-76 579.8 33.7 337 1-392 137-526 (553)
9 3aq1_B Thermosome subunit; gro 100.0 3.6E-71 1.2E-75 570.7 34.3 337 1-392 80-469 (500)
10 3p9d_A T-complex protein 1 sub 100.0 6.5E-72 2.2E-76 582.5 27.0 342 1-392 131-541 (559)
11 1q3q_A Thermosome alpha subuni 100.0 8.4E-71 2.9E-75 573.3 34.6 337 1-392 130-518 (548)
12 3iyg_B T-complex protein 1 sub 100.0 1.8E-70 6E-75 567.1 36.7 336 1-392 119-504 (513)
13 1a6d_A Thermosome (alpha subun 100.0 7.6E-71 2.6E-75 573.3 33.4 336 1-392 129-515 (545)
14 3iyg_A T-complex protein 1 sub 100.0 1.8E-70 6.3E-75 568.9 35.1 342 1-392 117-521 (529)
15 1a6d_B Thermosome (beta subuni 100.0 1.6E-70 5.3E-75 571.0 33.3 337 1-392 128-516 (543)
16 3iyg_E T-complex protein 1 sub 100.0 5.7E-70 1.9E-74 563.8 36.8 344 1-392 117-508 (515)
17 3p9d_D T-complex protein 1 sub 100.0 2.9E-71 9.8E-76 574.5 24.7 341 1-392 126-521 (528)
18 3iyg_D T-complex protein 1 sub 100.0 1.1E-69 3.8E-74 561.8 35.3 337 1-392 118-511 (518)
19 3p9d_B T-complex protein 1 sub 100.0 2E-70 7E-75 568.6 21.7 336 1-392 126-511 (527)
20 3p9d_G T-complex protein 1 sub 100.0 2.5E-70 8.4E-75 569.7 22.2 339 1-392 131-520 (550)
21 3iyg_Q T-complex protein 1 sub 100.0 1.6E-68 5.5E-73 552.6 35.6 343 1-392 118-505 (512)
22 3p9d_E T-complex protein 1 sub 100.0 2.5E-69 8.7E-74 563.3 29.2 343 1-392 152-551 (562)
23 3iyg_G T-complex protein 1 sub 100.0 3.7E-68 1.3E-72 549.9 35.8 337 1-392 116-507 (515)
24 3iyg_Z T-complex protein 1 sub 100.0 1.6E-68 5.6E-73 552.6 32.3 336 1-392 117-510 (517)
25 3p9d_F T-complex protein 1 sub 100.0 9.8E-68 3.4E-72 550.3 22.0 337 1-392 124-530 (546)
26 3p9d_H T-complex protein 1 sub 100.0 6E-67 2.1E-71 546.0 14.4 337 1-392 133-541 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 2.5E-54 8.6E-59 382.7 13.8 190 65-254 1-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.6E-52 5.6E-57 371.8 15.1 185 69-253 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 3.5E-42 1.2E-46 291.8 14.4 144 71-214 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 7.4E-25 2.5E-29 196.3 14.1 145 64-262 2-174 (178)
31 1ass_A Thermosome; chaperonin, 99.9 4.4E-21 1.5E-25 168.6 14.1 127 69-218 1-154 (159)
32 2lnd_A De novo designed protei 30.3 66 0.0023 24.0 4.3 51 107-158 35-86 (112)
33 3v7e_A Ribosome-associated pro 26.0 86 0.003 23.0 4.5 27 116-142 20-46 (82)
34 2f6m_A Suppressor protein STP2 23.9 56 0.0019 23.4 2.8 23 266-288 13-35 (65)
35 3swy_A Cyclic nucleotide-gated 23.4 76 0.0026 21.1 3.2 11 238-248 33-43 (46)
36 3v7q_A Probable ribosomal prot 22.9 1.9E+02 0.0063 22.0 6.0 53 116-178 28-80 (101)
37 2jz2_A SSL0352 protein; SH3-li 20.6 2.2E+02 0.0074 20.2 5.2 32 188-219 10-43 (66)
38 2v5h_A Acetylglutamate kinase; 20.6 86 0.0029 29.4 4.3 47 243-293 43-93 (321)
39 1cf7_B Protein (transcription 20.6 1.4E+02 0.0047 23.0 4.6 22 260-281 53-74 (95)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.3e-92 Score=730.12 Aligned_cols=389 Identities=34% Similarity=0.513 Sum_probs=377.6
Q ss_pred ChHHHHHHHHhcccccCCCHHHHHHHHHHhcCCchhHHHHHHHHHHhhccCceEEEEcCCCccceeEEEeeEEEeccccc
Q 016236 1 MAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKS 80 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~~~~~l~~Va~ts~~~~~~~~~li~~a~~~vg~~g~I~v~~g~~~~~~~~~v~G~~~d~g~~s 80 (392)
+|++.++++|+++++|+++.++|.+||+||++ ++.+++++++|+.+|+.+|.|+|+.+++..+++++++||+||++|+|
T Consensus 121 ~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~s 199 (546)
T 3rtk_A 121 KAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYIS 199 (546)
T ss_dssp HHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSS
T ss_pred HHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccC
Confidence 47899999999999999999999999999999 88999999999999999999999988877788999999999999999
Q ss_pred ccccccccccceeecCceeeecccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCC
Q 016236 81 PYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGL 160 (392)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~~~~~l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~ 160 (392)
|||+|+|++|..+++||||+++|++|+++++++|++++++++|+||||++++|++++|++|+.|+++|++++++||+|+|
T Consensus 200 p~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~ 279 (546)
T 3rtk_A 200 GYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGF 279 (546)
T ss_dssp GGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSC
T ss_pred cccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc---
Q 016236 161 AEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS--- 237 (392)
Q Consensus 161 g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s--- 237 (392)
|+.|+++|+|||++|||++++++.+++++++++++||+|++|++++++|+||+||++++++..|++||+++++.++|
T Consensus 280 ~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 359 (546)
T 3rtk_A 280 GDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYD 359 (546)
T ss_dssp HHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHH
T ss_pred cccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -HHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHHHHHHHHcCcccCCcHHHHHHHHHHHHhcCCChhHHHHHH
Q 016236 238 -DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQ 316 (392)
Q Consensus 238 -~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~al~~gvVpGGGa~e~~~s~~L~~~~~~~~~~q~g~~ 316 (392)
++|+|||++|+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++.+|++++ .++++|+|++
T Consensus 360 ~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~ 438 (546)
T 3rtk_A 360 REKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGAN 438 (546)
T ss_dssp HHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887 7889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 317 IVQNALKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 317 ~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+|++||+.||++||+|||+|+.++ ++|++. ..++|||+.+|+|.||++.|||||+.||+++|++|+|+|++||+|
T Consensus 439 ~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~i 514 (546)
T 3rtk_A 439 IVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTT 514 (546)
T ss_dssp HHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999885 356999999999999999999999999999999999999999986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3e-91 Score=724.32 Aligned_cols=391 Identities=36% Similarity=0.542 Sum_probs=380.0
Q ss_pred ChHHHHHHHHhcccccCCCHHHHHHHHHHhcCCchhHHHHHHHHHHhhccCceEEEEcCCCccceeEEEeeEEEeccccc
Q 016236 1 MAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKS 80 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~~~~~l~~Va~ts~~~~~~~~~li~~a~~~vg~~g~I~v~~g~~~~~~~~~v~G~~~d~g~~s 80 (392)
+|++.++++|+++++|+++.++|.+||+||++++++|++++++|+.+|+++|.|+|++|++++|++++++||+||+||.|
T Consensus 121 ~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~ 200 (547)
T 1kp8_A 121 KAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLS 200 (547)
T ss_dssp HHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSS
T ss_pred HHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccc
Confidence 47899999999999999999999999999999899999999999999999999999999999887799999999999999
Q ss_pred ccccccccccceeecCceeeecccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCC
Q 016236 81 PYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGL 160 (392)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~~~~~l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~ 160 (392)
|||+|+|++|..+++|||||++|++|+++++++|+++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+|
T Consensus 201 p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~ 280 (547)
T 1kp8_A 201 PYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGF 280 (547)
T ss_dssp TTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSC
T ss_pred cccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc---
Q 016236 161 AEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS--- 237 (392)
Q Consensus 161 g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s--- 237 (392)
|++|+++|+|||++|||++++++.+++++++++++||+|++|++++++|+||+||++++++++|++||+.+++.++|
T Consensus 281 ~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 360 (547)
T 1kp8_A 281 GDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYD 360 (547)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHH
T ss_pred ccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhh
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999999988
Q ss_pred -HHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHHHHHHHHcCcccCCcHHHHHHHHHHHHhcCCChhHHHHHH
Q 016236 238 -DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQ 316 (392)
Q Consensus 238 -~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~al~~gvVpGGGa~e~~~s~~L~~~~~~~~~~q~g~~ 316 (392)
|+|+|||+||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++.+|++++..++++|+|++
T Consensus 361 ~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~ 440 (547)
T 1kp8_A 361 REKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIK 440 (547)
T ss_dssp HHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988656789999999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 317 IVQNALKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 317 ~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+|++||+.||++||+|||+|+.++ ++|++. +.++|||+.+|+|+||++.|||||+.||+++|++|+++|++||+|
T Consensus 441 ~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~i 516 (547)
T 1kp8_A 441 VALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITT 516 (547)
T ss_dssp HHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999 999875 468999999999999999999999999999999999999999986
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=7.1e-90 Score=714.59 Aligned_cols=391 Identities=37% Similarity=0.570 Sum_probs=379.7
Q ss_pred ChHHHHHHHHhcccccCCCHHHHHHHHHHhcCCchhHHHHHHHHHHhhccCceEEEEcCCCccceeEEEeeEEEeccccc
Q 016236 1 MAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKS 80 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~~~~~l~~Va~ts~~~~~~~~~li~~a~~~vg~~g~I~v~~g~~~~~~~~~v~G~~~d~g~~s 80 (392)
+|++.++++|+++++|+++.++|.+||++|++ ++.|++++++|+.+|+++|.|+|++|++++|++++++||+||+||.|
T Consensus 121 ~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~ 199 (543)
T 1we3_A 121 KAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYIS 199 (543)
T ss_dssp HHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSS
T ss_pred HHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccc
Confidence 47899999999999999999999999999999 89999999999999999999999999999887799999999999999
Q ss_pred ccccccccccceeecCceeeecccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCC
Q 016236 81 PYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGL 160 (392)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~~~~~l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~ 160 (392)
|||+++|++|..+++||+|+++|++|+++++++|+++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+|
T Consensus 200 p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~ 279 (543)
T 1we3_A 200 PYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGF 279 (543)
T ss_dssp GGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSS
T ss_pred cccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc---
Q 016236 161 AEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS--- 237 (392)
Q Consensus 161 g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s--- 237 (392)
|++|+++|+|||++|||++++++.|++++++++++||+|++|++++++|+||+||++++++.+|+++|+.+++.++|
T Consensus 280 ~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 359 (543)
T 1we3_A 280 GDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYA 359 (543)
T ss_dssp HHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHH
T ss_pred hhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -HHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHHHHHHHHcCcccCCcHHHHHHHHHHHHhcCC-ChhHHHHH
Q 016236 238 -DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGV 315 (392)
Q Consensus 238 -~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~al~~gvVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~ 315 (392)
++|+|||+||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++.+|++++.+ ++++|+|+
T Consensus 360 ~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i 439 (543)
T 1we3_A 360 REKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGA 439 (543)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875 88999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-CCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 316 QIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 316 ~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~-~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
++|++||+.||++||+|||+||.++ ++|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 440 ~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (543)
T 1we3_A 440 KIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTT 518 (543)
T ss_dssp HHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999873 3568999999999999999999999999999999999999999986
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=4.6e-91 Score=723.21 Aligned_cols=392 Identities=38% Similarity=0.579 Sum_probs=338.0
Q ss_pred ChHHHHHHHHhcccccCCCHHHHHHHHHHhcCCchhHHHHHHHHHHhhccCceEEEEcCCCccceeEEEeeEEEeccccc
Q 016236 1 MAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKS 80 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~~~~~l~~Va~ts~~~~~~~~~li~~a~~~vg~~g~I~v~~g~~~~~~~~~v~G~~~d~g~~s 80 (392)
+|++.++++|+++++|+++.++|.+||+||+++++.|++++++|+.+++++|.|+|++|++++|++++++||+||++|.|
T Consensus 122 ~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~ 201 (545)
T 1iok_A 122 VATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLS 201 (545)
T ss_dssp HHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSC
T ss_pred HHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccc
Confidence 47899999999999999888899999999999899999999999999999999999999999887799999999999999
Q ss_pred ccccccccccceeecCceeeecccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCC
Q 016236 81 PYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGL 160 (392)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~~~~~l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~ 160 (392)
|||+|+|++|..+++||||+++|++|+++++++|+++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+|
T Consensus 202 p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~ 281 (545)
T 1iok_A 202 PYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGF 281 (545)
T ss_dssp GGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCC
T ss_pred cccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc---
Q 016236 161 AEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS--- 237 (392)
Q Consensus 161 g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s--- 237 (392)
|++|+++|+|||++|||++++++.+++++++++++||+|++|++++++|+||+||++++++++|++||+.+++.++|
T Consensus 282 ~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 361 (545)
T 1iok_A 282 GDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYD 361 (545)
T ss_dssp TTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSH
T ss_pred hhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -HHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHHHHHHHHcCcccCCcHHHHHHHHHHHHhcCCChhHHHHHH
Q 016236 238 -DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQ 316 (392)
Q Consensus 238 -~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~al~~gvVpGGGa~e~~~s~~L~~~~~~~~~~q~g~~ 316 (392)
++|+|||+||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++.+|++++..++++|+|++
T Consensus 362 ~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~ 441 (545)
T 1iok_A 362 REKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIA 441 (545)
T ss_dssp HHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHH
T ss_pred HHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988656789999999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 317 IVQNALKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 317 ~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+|++||+.||++||+|||+|+.++ ++|++.+++++|||+.+|+++||++.|||||+.||+++|++|+++|++||+|
T Consensus 442 ~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~i 518 (545)
T 1iok_A 442 IIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITT 518 (545)
T ss_dssp HHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999 9998754578999999999999999999999999999999999999999986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=3e-74 Score=601.27 Aligned_cols=367 Identities=14% Similarity=0.170 Sum_probs=299.1
Q ss_pred ChHHHHHHHHhcccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHhhccCce----------------EEE
Q 016236 1 MAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWENDL----------------ITI 56 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~g~----------------I~v 56 (392)
+|++.++++|+++++|++ +++.|.+||+||+++ ++.|++++++|+.+|++++. |+|
T Consensus 127 ~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I 206 (590)
T 3p9d_C 127 KALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRV 206 (590)
T ss_dssp HHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCE
T ss_pred HHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEE
Confidence 378999999999999987 368899999998753 68999999999999987653 344
Q ss_pred E--cCCCccceeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHHHHHHHH-----
Q 016236 57 F--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQAS----- 116 (392)
Q Consensus 57 ~--~g~~~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~~~~~l----- 116 (392)
+ +|++.. ++++++||+||+++.+|.| ..+++||||+++|++ |++++++.+++
T Consensus 207 ~ki~Ggs~~-ds~lv~Gmvfdk~~~~~~m-------~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~ 278 (590)
T 3p9d_C 207 EKIPGGDVL-DSRVLKGVLLNKDVVHPKM-------SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEE 278 (590)
T ss_dssp EEESSCCGG-GCBCCSSEEECCCCSCTTS-------CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHH
T ss_pred EEecCCCcc-cceeeeEEEEecccCCCCC-------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHH
Confidence 3 488874 5899999999999888865 347999999999984 45566666555
Q ss_pred ------HHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCC
Q 016236 117 ------LPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTY 190 (392)
Q Consensus 117 ------~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~ 190 (392)
+++.++|++|||+.++|+++++++|+.|+ |++++++ ++++|+|||++|||+++++ +++
T Consensus 279 ~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~------I~av~~~-----~k~~le~ia~~TGa~iis~-----l~~ 342 (590)
T 3p9d_C 279 QVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG------CSVLRRV-----KKSDNNRIARVTGATIVNR-----VED 342 (590)
T ss_dssp HHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT------CCCCCCC-----CHHHHHHHHHHHTCCCCSC-----STT
T ss_pred HHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc------ceeeccC-----CHHHHHHHHHHhCCceeec-----ccC
Confidence 68889987666666779999999999764 5666665 8999999999999999997 899
Q ss_pred CCCCCcee-eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHhhhcccHHH
Q 016236 191 FVPLKLGS-CKRVI---ATMDNVVIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKL 240 (392)
Q Consensus 191 ~~~~~LG~-~~~v~---i~~~~~~~~~g~~~~~~--------------------------i~~r~~~l~~~l~~~~s~~l 240 (392)
+++++||+ |++|+ +++++|+||+||+++++ +++|+++|+++++.++|+-
T Consensus 343 ~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~- 421 (590)
T 3p9d_C 343 LKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHH- 421 (590)
T ss_dssp CCTTSCBCCCSEEECCEETTEECEEECC----------------------------------------------------
T ss_pred CCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHH-
Confidence 99999999 99996 68999999999999988 9999999999999888733
Q ss_pred HHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHHHHHHHHc-CcccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHH
Q 016236 241 KDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIV 318 (392)
Q Consensus 241 ~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~al~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~ 318 (392)
.+|+++|+||+|||+|||+|+++++|+||+++||||++|+++++ |+|||||++|++++.+|++++.. ++++|+|+++|
T Consensus 422 ~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~ 501 (590)
T 3p9d_C 422 HHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAV 501 (590)
T ss_dssp ------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHH
T ss_pred HHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999 59999999999999999998654 88999999999
Q ss_pred HHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 319 QNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 319 a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
++||+.||++||+|||+||.++ .+|++. +++++|||+.+|+|+||++.|||||+.||+++|++|+++|++||||
T Consensus 502 a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 579 (590)
T 3p9d_C 502 ADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRV 579 (590)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 999873 4578999999999999999999999999999999999999999986
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=8.6e-72 Score=580.14 Aligned_cols=337 Identities=19% Similarity=0.266 Sum_probs=309.4
Q ss_pred ChHHHHHHHHhcccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHhhccC-ce-----EEEE--cCCCccc
Q 016236 1 MAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITIF--DRKALYN 64 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~-g~-----I~v~--~g~~~~~ 64 (392)
+|++.++++|+++++|++ +++.|.+||+||+++ ++.|++++++|+.+++++ |. |+|+ .|++. +
T Consensus 126 ~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~-~ 204 (543)
T 3ruv_A 126 AAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASI-D 204 (543)
T ss_dssp HHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCG-G
T ss_pred HHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCc-c
Confidence 378999999999999987 789999999999974 789999999999999987 65 8886 67776 5
Q ss_pred eeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHHH-----------HHHHHHHHH
Q 016236 65 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCM 120 (392)
Q Consensus 65 ~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~-----------~~~~l~~i~ 120 (392)
++++++||+||++|.||||+. +++||||+++|++ |+++++ +.++++++.
T Consensus 205 ds~lv~G~v~dk~~~~~~m~~-------~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~ 277 (543)
T 3ruv_A 205 DTELIKGVLVDKERVSAQMPK-------KVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIK 277 (543)
T ss_dssp GCEEESSEEESCCCSCTTSCS-------EEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeecceEEeccccCccccc-------cccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999843 7999999999984 566655 678889999
Q ss_pred hcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeee
Q 016236 121 MQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCK 200 (392)
Q Consensus 121 ~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~ 200 (392)
++|+||||++++|+++++++|..+ +|++|+++ ++++|+|||++|||+++++ ++++++++||+|+
T Consensus 278 ~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~~v-----~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~ 341 (543)
T 3ruv_A 278 ASGANVLFCQKGIDDLAQHYLAKE------GIVAARRV-----KKSDMEKLAKATGANVIAA-----IAALSAQDLGDAG 341 (543)
T ss_dssp HHTCSEEEESSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEE
T ss_pred HcCCCEEEEeCCccHHHHHHHHHc------CcEEEeeC-----CHHHHHHHHHHhCCceecc-----cccCCHHHCCccc
Confidence 999999999999999999999853 37899988 8889999999999999998 8999999999999
Q ss_pred EEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHH
Q 016236 201 RVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHA 277 (392)
Q Consensus 201 ~v~i~---~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a 277 (392)
+|++. +++|+||+||++++ .|||+|||+|+++++|+||+++||||+
T Consensus 342 ~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~kr~l~DAl~~ 390 (543)
T 3ruv_A 342 LVEERKISGDSMIFVEECKHPK-------------------------------AVTMLIRGTTEHVIEEVARAVDDAVGV 390 (543)
T ss_dssp EEEEEEETTEEEEEEECCSSCS-------------------------------SEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCceEEEEECCCCCc-------------------------------eeEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99864 88999999999875 789999999999999999999999999
Q ss_pred HHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCC
Q 016236 278 VQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSD 350 (392)
Q Consensus 278 ~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~----~~~~ 350 (392)
+|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++++
T Consensus 391 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 470 (543)
T 3ruv_A 391 VGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKC 470 (543)
T ss_dssp HHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTT
T ss_pred HHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCce
Confidence 99999999 9999999999999999998765 899999999999999999999999999999999 999863 3468
Q ss_pred eeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 351 LGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 351 ~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 471 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 512 (543)
T 3ruv_A 471 AGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRI 512 (543)
T ss_dssp EEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999999999999997
No 7
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-71 Score=575.29 Aligned_cols=340 Identities=15% Similarity=0.163 Sum_probs=308.4
Q ss_pred ChHHHHHHHHhcccccCC--C----HHHHHHHHHHhcC------CchhHHHHHHHHHHhhccC---ceEEEE--cCCCcc
Q 016236 1 MAADAVVRNLDCQARKIT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALY 63 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~----~~~l~~Va~ts~~------~~~~~~~li~~a~~~vg~~---g~I~v~--~g~~~~ 63 (392)
+|++.++++|+++++|++ + ++.|.+||+||++ +++.|++++++|+.+|+.+ +.|+|+ .|++.
T Consensus 118 ~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~- 196 (515)
T 3iyg_H 118 TATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGAL- 196 (515)
T ss_pred HHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCc-
Confidence 478999999999999984 5 5667999999885 4689999999999999876 788887 46666
Q ss_pred ceeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHHHH-----------HHHHHHH
Q 016236 64 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPC 119 (392)
Q Consensus 64 ~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~~-----------~~~l~~i 119 (392)
+++++++||+||++|.||||.++|+ +++||||+++|++ |++++++ .++++++
T Consensus 197 ~ds~lv~G~~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I 272 (515)
T 3iyg_H 197 EESQLVAGVAFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKI 272 (515)
T ss_pred cceEEEeeeEEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5699999999999999999988777 7999999999984 6777765 6779999
Q ss_pred HhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceee
Q 016236 120 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 199 (392)
Q Consensus 120 ~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~ 199 (392)
.++|+||||++++|++.++++|.. + +|+++++. ++.+|+|||++|||+++++ ++++++++||+|
T Consensus 273 ~~~g~~vvi~~~~I~dla~~~l~~---~---gI~~v~~~-----~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a 336 (515)
T 3iyg_H 273 HHSGAKVVLSKLPIGDVATQYFAD---R---DMFCAGRV-----PEEDLKRTMMACGGSIQTS-----VNALSSDVLGRC 336 (515)
T ss_pred HhcCCcEEEECCcccHHHHHHHHH---c---CCcccccc-----cHHHHHHHHHHhCCEEeec-----cccCCHHHCCcc
Confidence 999999999999999999998863 3 36788877 8889999999999999998 899999999999
Q ss_pred eEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHH
Q 016236 200 KRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 276 (392)
Q Consensus 200 ~~v~i---~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~ 276 (392)
++|++ ++++|+||+||+++. .|||+|||+|+++++|+||+++||||
T Consensus 337 ~~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~tI~lrG~t~~~l~E~kr~i~DAl~ 385 (515)
T 3iyg_H 337 QVFEETQIGGERYNFFTGCPKAK-------------------------------TCTIILRGGAEQFMEETERSLHDAIM 385 (515)
T ss_pred cEEEEEEEcCeEEEEEecCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 99985 478999999998764 89999999999999999999999999
Q ss_pred HHHHHHHc-CcccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCC
Q 016236 277 AVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSD 350 (392)
Q Consensus 277 a~r~al~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~ 350 (392)
++|+++++ ++|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+||.++ .+|++. ++.+
T Consensus 386 ~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~ 465 (515)
T 3iyg_H 386 IVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMW 465 (515)
T ss_pred HHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCC
Confidence 99999998 59999999999999999998766 899999999999999999999999999999999 999873 3457
Q ss_pred eeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 351 LGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 351 ~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 466 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 507 (515)
T 3iyg_H 466 YGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSV 507 (515)
T ss_pred eeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999986
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.1e-71 Score=579.79 Aligned_cols=337 Identities=20% Similarity=0.297 Sum_probs=309.8
Q ss_pred ChHHHHHHHHhcccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHhhccC--ce-------EEEE--cCCC
Q 016236 1 MAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITIF--DRKA 61 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~--g~-------I~v~--~g~~ 61 (392)
+|++.++++|+++++|++ +++.|.+||+||+++ ++.|++++++|+.+++++ |. |+|+ .|++
T Consensus 137 ~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~ 216 (553)
T 3ko1_A 137 KAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGS 216 (553)
T ss_dssp HHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSC
T ss_pred HHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCc
Confidence 378999999999999987 789999999999986 689999999999999875 66 8887 5767
Q ss_pred ccceeEEEeeEEEecccccccccccccccceeecCceeeeccc-------------ccCCHHH-----------HHHHHH
Q 016236 62 LYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASL 117 (392)
Q Consensus 62 ~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~-----------~~~~l~ 117 (392)
. +++++++||+||++|.||||+. +++||||+++|+ +|+++++ +.++++
T Consensus 217 ~-~ds~lv~G~v~dk~~~~~~m~~-------~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve 288 (553)
T 3ko1_A 217 I-NDTQLVYGIVVDKEVVHPGMPK-------RLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVD 288 (553)
T ss_dssp G-GGCEEESEEEECSCBSCTTSCS-------CCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred c-ccceeeEEEEecccccCCCCcc-------ccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 6 5699999999999999999843 689999999998 4677766 567789
Q ss_pred HHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCce
Q 016236 118 PCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLG 197 (392)
Q Consensus 118 ~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG 197 (392)
++.++|+||||++++|+++++++|..+ +|++|+++ ++++|+|||++|||+++++ ++++++++||
T Consensus 289 kI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~~v-----~k~~leria~~tGa~ivs~-----l~~l~~~~LG 352 (553)
T 3ko1_A 289 KILATGANVIICQKGIDEVAQSYLAKK------GVLAVRRA-----KKSDLEKLARATGGRVVSN-----IDEISEQDLG 352 (553)
T ss_dssp HHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEECCC-----CHHHHHHHHTTTTCCEESC-----GGGCCSSSSE
T ss_pred HHHhhcceEEEeccChHHHHHHHHHhc------chhhhhhh-----hhhhHHHHHHhhCCeeecc-----cccCChhhcc
Confidence 999999999999999999999999854 37899988 7889999999999999998 8999999999
Q ss_pred eeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHH
Q 016236 198 SCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNA 274 (392)
Q Consensus 198 ~~~~v~i~---~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DA 274 (392)
+|++|++. +++|+||+||++++ .|||+|||+|+++++|+||+++||
T Consensus 353 ~a~~v~~~~ig~d~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~er~l~DA 401 (553)
T 3ko1_A 353 YASLIEERKVGEDKMVFVEGAKNPK-------------------------------SISILIRGGLERLVDETERALRDA 401 (553)
T ss_dssp ECSEEECCCCSSSCCEEEESCSSSS-------------------------------CEEEEECCSSTTHHHHHHHHHHHH
T ss_pred hHHHHHHhhcCcceEEEeccCCCCc-------------------------------eEEEeeeccHHHHHHHHHHHHHHH
Confidence 99999864 89999999999875 789999999999999999999999
Q ss_pred HHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC
Q 016236 275 LHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS 348 (392)
Q Consensus 275 l~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~ 348 (392)
||++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++
T Consensus 402 l~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 481 (553)
T 3ko1_A 402 LGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENEN 481 (553)
T ss_dssp HHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGG
T ss_pred HHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcC
Confidence 99999999999 9999999999999999998765 899999999999999999999999999999999 999873 23
Q ss_pred -CCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 349 -SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 349 -~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 482 ~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 526 (553)
T 3ko1_A 482 NKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRI 526 (553)
T ss_dssp GTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHE
T ss_pred CceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEeh
Confidence 57999999999999999999999999999999999999999986
No 9
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.6e-71 Score=570.65 Aligned_cols=337 Identities=18% Similarity=0.262 Sum_probs=305.6
Q ss_pred ChHHHHHHHHhcccccCC--CHHHHHHHHHHhcC------CchhHHHHHHHHHHhhccC--ce--------EEEE--cCC
Q 016236 1 MAADAVVRNLDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL--------ITIF--DRK 60 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~~~~l~~Va~ts~~------~~~~~~~li~~a~~~vg~~--g~--------I~v~--~g~ 60 (392)
+|++.++++|+++++|++ +++.|.+||+||++ +++.|++++++|+.+++++ |. |+|+ +|+
T Consensus 80 ~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~ 159 (500)
T 3aq1_B 80 HAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGG 159 (500)
T ss_dssp HHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESS
T ss_pred HHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCC
Confidence 478999999999999986 47899999998865 4789999999999999866 43 6776 798
Q ss_pred CccceeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHHHH-----------HHHH
Q 016236 61 ALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQAS 116 (392)
Q Consensus 61 ~~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~~-----------~~~l 116 (392)
++ +++++++||+||++|.||||+. +++||||+++|++ |++++++ .+++
T Consensus 160 ~~-~ds~lv~G~v~dk~~~~~~m~~-------~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~l 231 (500)
T 3aq1_B 160 SI-DDSELIDGLVIDKERSHPNMPE-------KVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMA 231 (500)
T ss_dssp CG-GGCEEESEEEESCCCSSTTSCS-------EEEEEEEEEESSCBCC-------------------------CHHHHHH
T ss_pred Cc-cceEEEeeeEEeecCCCCCCcc-------cccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHH
Confidence 88 5799999999999999999942 6899999999998 6666665 8999
Q ss_pred HHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCc
Q 016236 117 LPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 196 (392)
Q Consensus 117 ~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~L 196 (392)
+++.++|+||||++++|+++++++|+.|+ |++|++. ++++|+|||++|||+++++ ++++++++|
T Consensus 232 e~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~iis~-----l~~~~~~~L 295 (500)
T 3aq1_B 232 EKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVRRV-----KKSDLKRLSKVTGATIIQD-----LDQITTEDV 295 (500)
T ss_dssp HHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHCCCCBSC-----TTCCCSTTC
T ss_pred HHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEEeC-----CHHHHHHHHHHhCCeEecc-----cccCCHhHC
Confidence 99999999999999999999999999874 7999987 8999999999999999997 899999999
Q ss_pred eeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHH
Q 016236 197 GSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITN 273 (392)
Q Consensus 197 G~~~~v~i~---~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~D 273 (392)
|+|++|++. +++|+||+||+++ ++|||+|||+|+++++|+||+++|
T Consensus 296 G~a~~v~~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~D 344 (500)
T 3aq1_B 296 GTAGLVEEKEVRGGKMTYVTGCQNS-------------------------------KAVTVLLHGGTEHVVDSLDHALND 344 (500)
T ss_dssp EEEEEEEEEECSSSEEEEEEEETTC-------------------------------CCEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCceEEEEEEecCeEEEEEECCCCC-------------------------------ceEEEEecCCcHHHHHHHHHHHHH
Confidence 999999865 8999999999865 589999999999999999999999
Q ss_pred HHHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---C
Q 016236 274 ALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---D 347 (392)
Q Consensus 274 Al~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~ 347 (392)
|||++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.++ .+|++. +
T Consensus 345 al~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~ 424 (500)
T 3aq1_B 345 ALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKG 424 (500)
T ss_dssp HHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCC
Confidence 999999999999 9999999999999999998765 889999999999999999999999999999999 999862 3
Q ss_pred CCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 348 SSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 348 ~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
..++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 425 ~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 469 (500)
T 3aq1_B 425 NKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRI 469 (500)
T ss_dssp CTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999999999999997
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=6.5e-72 Score=582.50 Aligned_cols=342 Identities=18% Similarity=0.262 Sum_probs=310.5
Q ss_pred ChHHHHHHHHhc-ccccCCC--HHHHHHHHHHhcCC------chhHHHHHHHHHHhhcc-----Cce-----EEEE--cC
Q 016236 1 MAADAVVRNLDC-QARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITIF--DR 59 (392)
Q Consensus 1 ~A~~~~l~~L~~-~a~~v~~--~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~-----~g~-----I~v~--~g 59 (392)
+|++.++++|++ +++|++. .+.|.+||+||+++ ++.|++|+++|+.+|++ +|. |+|+ .|
T Consensus 131 ~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~G 210 (559)
T 3p9d_A 131 VALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHG 210 (559)
T ss_dssp HHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEES
T ss_pred HHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecC
Confidence 478999999999 9999974 67899999999986 78999999999999983 354 4454 38
Q ss_pred CCccceeEEEeeEEEecccccccccccccccceeec--Cceeeeccccc-------------CCHHH-----------HH
Q 016236 60 KALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLD--GALVLIYDTKI-------------SNSNV-----------IR 113 (392)
Q Consensus 60 ~~~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~--~~~Il~~d~~i-------------~~~~~-----------~~ 113 (392)
+++. ++++++||+||++|.||||++ +++ ||||+++|+++ +++++ +.
T Consensus 211 gs~~-ds~lv~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~ 282 (559)
T 3p9d_A 211 KSAT-ESLLVPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVL 282 (559)
T ss_dssp SCSS-CCBCCSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHH
T ss_pred CCcc-ceeEeccEEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHH
Confidence 8885 599999999999999999853 677 99999999986 34333 78
Q ss_pred HHHHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCc-CCCC
Q 016236 114 QASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFV 192 (392)
Q Consensus 114 ~~l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~-~~~~ 192 (392)
++++++.++|+||||++++|+++++++|+.|+ |++|+++ ++++|+|||++|||+++++..++.+ ++++
T Consensus 283 ~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~TGa~iis~~~~l~~~e~~~ 351 (559)
T 3p9d_A 283 ERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------IMGVRRC-----KKEDLRRIARATGATLVSSMSNLEGEETFE 351 (559)
T ss_dssp HHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------CEEESSC-----CHHHHHHHHHHSSCCCBCCSCCSTTCCCCC
T ss_pred HHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------CceEccC-----CHHHHHHHHHHhCCEEEeccccccccccCC
Confidence 99999999999999999999999999999885 6899988 8889999999999999999777664 8999
Q ss_pred CCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHH
Q 016236 193 PLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKL 269 (392)
Q Consensus 193 ~~~LG~~~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r 269 (392)
+++||+|++|+ +++++|+||+||+++ ++|||+|||+|+++++|+||
T Consensus 352 ~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr 400 (559)
T 3p9d_A 352 SSYLGLCDEVVQAKFSDDECILIKGTSKH-------------------------------SSSSIILRGANDYSLDEMER 400 (559)
T ss_dssp TTTSCCEEEEEEEECSSCEEECEEEESSS-------------------------------CCCCEEEEESCHHHHHHHHH
T ss_pred HhHCccceEEEEEEEcCceEEEEEcCCCC-------------------------------CEEEEEEcCCCHHHHHHHHH
Confidence 99999999998 689999999999864 68999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc
Q 016236 270 KITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ 346 (392)
Q Consensus 270 ~i~DAl~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~ 346 (392)
+++||||++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 401 ~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 480 (559)
T 3p9d_A 401 SLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSY 480 (559)
T ss_dssp HHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999876 899999999999999999999999999999999 999863
Q ss_pred ---CCC------------CeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 347 ---DSS------------DLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 347 ---~~~------------~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+.. ++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 481 h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (559)
T 3p9d_A 481 HAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRI 541 (559)
T ss_dssp HHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 333 6999999999999999999999999999999999999999986
No 11
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=8.4e-71 Score=573.27 Aligned_cols=337 Identities=18% Similarity=0.288 Sum_probs=311.4
Q ss_pred ChHHHHHHHHhcccccCC--CHHHHHHHHHHhcC------CchhHHHHHHHHHHhhccC--c-------eEEEE--cCCC
Q 016236 1 MAADAVVRNLDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKA 61 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~~~~l~~Va~ts~~------~~~~~~~li~~a~~~vg~~--g-------~I~v~--~g~~ 61 (392)
+|++.++++|+++++|++ +.++|.+||+||++ +++.|++++++|+.+++++ | .|+|+ +|++
T Consensus 130 ~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~ 209 (548)
T 1q3q_A 130 LAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEG 209 (548)
T ss_dssp HHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSC
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCC
Confidence 378999999999999987 48899999999875 3688999999999999865 4 78887 8988
Q ss_pred ccceeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHHHH-----------HHHHH
Q 016236 62 LYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASL 117 (392)
Q Consensus 62 ~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~~-----------~~~l~ 117 (392)
+. ++++++||+||++|.||||+ + +++||||+++|++ |++++++ .++++
T Consensus 210 ~~-ds~lv~G~v~dk~~~~~~m~---~----~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le 281 (548)
T 1q3q_A 210 VE-ESELVRGVVIDKEVVHPRMP---K----RVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVD 281 (548)
T ss_dssp GG-GCEEESSEEESCCCSSTTSC---S----EESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-ceEEEeeEEEeccCCCCCCc---c----eecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 85 58999999999999999994 2 6899999999998 7778775 89999
Q ss_pred HHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCce
Q 016236 118 PCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLG 197 (392)
Q Consensus 118 ~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG 197 (392)
++.++|+||||++++|+++++++|+.|+ |++|++. ++++|+|||++|||+++++ ++++++++||
T Consensus 282 ~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG 345 (548)
T 1q3q_A 282 HIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVRRV-----KKSDMEKLAKATGAKIVTN-----VKDLTPEDLG 345 (548)
T ss_dssp HHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHCCCCBSS-----GGGCCGGGCE
T ss_pred HHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEccC-----CHHHHHHHHHHhCCeEecc-----cccCCHHHCC
Confidence 9999999999999999999999999874 7999987 8999999999999999997 8999999999
Q ss_pred eeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHH
Q 016236 198 SCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNA 274 (392)
Q Consensus 198 ~~~~v~i~---~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DA 274 (392)
+|++|++. +++|+||+||+++ ++|||+|||+|+++++|+||+++||
T Consensus 346 ~a~~v~~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~er~l~DA 394 (548)
T 1q3q_A 346 YAEVVEERKLAGENMIFVEGCKNP-------------------------------KAVTILIRGGTEHVIDEVERALEDA 394 (548)
T ss_dssp EESEEEEEEETTEEEEEEECCSSC-------------------------------SSEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CceEEEEEEecCceEEEEecCCCC-------------------------------CeEEEEECCCChHHHHHHHHHHHHH
Confidence 99999864 8999999999875 5899999999999999999999999
Q ss_pred HHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC
Q 016236 275 LHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS 348 (392)
Q Consensus 275 l~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~ 348 (392)
||++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.++ .+|++. +.
T Consensus 395 l~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 474 (548)
T 1q3q_A 395 VKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRG 474 (548)
T ss_dssp HHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCC
Confidence 99999999999 9999999999999999998765 889999999999999999999999999999999 999863 34
Q ss_pred CCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 349 SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 349 ~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 475 ~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (548)
T 1q3q_A 475 LGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRI 518 (548)
T ss_dssp TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999997
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.8e-70 Score=567.11 Aligned_cols=336 Identities=17% Similarity=0.198 Sum_probs=306.1
Q ss_pred ChHHHHHHHHhcccccCC-----CHHHHHHHHHHhcC------CchhHHHHHHHHHHhhccC---ceEEEE--cCCCccc
Q 016236 1 MAADAVVRNLDCQARKIT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYN 64 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~-----~~~~l~~Va~ts~~------~~~~~~~li~~a~~~vg~~---g~I~v~--~g~~~~~ 64 (392)
+|++.++++|+++++|++ +++.|.+||+||++ +++.|++++++|+.+++++ +.|+|+ .|++. +
T Consensus 119 ~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~-~ 197 (513)
T 3iyg_B 119 EATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSL-A 197 (513)
T ss_pred HHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCc-c
Confidence 478999999999999987 56889999998886 3579999999999999987 888886 47766 4
Q ss_pred eeEEEeeEEEecccccccccccccccceeecCceeeeccc--------------ccCCHHHHHH-----------HHHHH
Q 016236 65 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT--------------KISNSNVIRQ-----------ASLPC 119 (392)
Q Consensus 65 ~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~--------------~i~~~~~~~~-----------~l~~i 119 (392)
++++++||+||++|.|| |+ .+++||||+++|+ +|++++++.+ +++++
T Consensus 198 ds~lv~G~v~dk~~~~~-m~-------~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I 269 (513)
T 3iyg_B 198 DSYLDEGFLLDKKIGVN-QP-------KRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERI 269 (513)
T ss_pred ceeEEeeEEEeccccCC-Cc-------eeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999988 42 3799999999998 4667776654 78899
Q ss_pred HhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceee
Q 016236 120 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 199 (392)
Q Consensus 120 ~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~ 199 (392)
.++|+||||++++|+++++++|..+ +|++||+| ++.+|+|||++|||+++++ ++++++++||+|
T Consensus 270 ~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~~-----~~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a 333 (513)
T 3iyg_B 270 LKHGINCFINRQLIYNYPEQLFGAA------GVMAIEHA-----DFVGVERLALVTGGEIAST-----FDHPELVKLGSC 333 (513)
T ss_pred HhcCCCEEEEcCCccHHHHHHHHHc------CceEEecC-----CHHHHHHHHHHhCCEEecc-----cccCCHhHCCcc
Confidence 9999999999999999999999864 58999999 4567999999999999997 899999999999
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHH
Q 016236 200 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 276 (392)
Q Consensus 200 ~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~ 276 (392)
++|+ ++++++++|.||+++ ++|||+|||+|+++++|+||+++||||
T Consensus 334 ~~v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~ 382 (513)
T 3iyg_B 334 KLIEEVMIGEDKLIHFSGVALG-------------------------------EACTIVLRGATQQILDEAERSLHDALC 382 (513)
T ss_pred cEEEEEEECCeEEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 9997 789999999999864 589999999999999999999999999
Q ss_pred HHHHHHHc-CcccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCC
Q 016236 277 AVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSD 350 (392)
Q Consensus 277 a~r~al~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~ 350 (392)
++|+++++ ++|||||++|++++.+|++++.+ ++++|+|+++|++||+.||++||+|||+||.++ .+|++. ++++
T Consensus 383 ~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~ 462 (513)
T 3iyg_B 383 VLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTT 462 (513)
T ss_pred HHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCc
Confidence 99999998 69999999999999999998765 899999999999999999999999999999999 999873 4568
Q ss_pred eeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 351 LGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 351 ~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 463 ~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 504 (513)
T 3iyg_B 463 AGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRV 504 (513)
T ss_pred eeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=7.6e-71 Score=573.25 Aligned_cols=336 Identities=20% Similarity=0.273 Sum_probs=310.3
Q ss_pred ChHHHHHHHHhcccccCC-CHHHHHHHHHHhcC------CchhHHHHHHHHHHhhccC---------ceEEEE--cCCCc
Q 016236 1 MAADAVVRNLDCQARKIT-TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---------DLITIF--DRKAL 62 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~-~~~~l~~Va~ts~~------~~~~~~~li~~a~~~vg~~---------g~I~v~--~g~~~ 62 (392)
+|++.++++|+++++| + +++.|.+||+||++ +++.|++++++|+.+++++ +.|+|+ +|+++
T Consensus 129 ~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~ 207 (545)
T 1a6d_A 129 LAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSV 207 (545)
T ss_dssp HHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCS
T ss_pred HHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCc
Confidence 3789999999999999 7 78999999999865 4689999999999999865 379998 88888
Q ss_pred cceeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHHHH-----------HHHHHH
Q 016236 63 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLP 118 (392)
Q Consensus 63 ~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~~-----------~~~l~~ 118 (392)
. ++++++||+||++|.||||+ + +++||+|+++|++ |++++++ .+++++
T Consensus 208 ~-ds~lv~G~v~dk~~~~~~m~---~----~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~ 279 (545)
T 1a6d_A 208 N-DTQFISGIVIDKEKVHSKMP---D----VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEK 279 (545)
T ss_dssp T-TCEEESEEEESCCCSCTTSC---S----EEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHH
T ss_pred e-eeEEEeeEEEeccCCCCCCc---c----eecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 58999999999999999994 2 6899999999998 6667665 899999
Q ss_pred HHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCcee
Q 016236 119 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 198 (392)
Q Consensus 119 i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~ 198 (392)
+.++|+||||++++|+++++++|+.|+ |++|++. ++++|+|||++|||+++++ ++++++++||+
T Consensus 280 I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~ 343 (545)
T 1a6d_A 280 IKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGE 343 (545)
T ss_dssp HHHTTCCEEEESSCBCHHHHHHHHHHT------CEEECSC-----CHHHHHHHHHHHCCCEESS-----GGGCCGGGCEE
T ss_pred HHHhCCCEEEECCCccHHHHHHHHHCC------eeEeccC-----CHHHHHHHHHHhCCeeecc-----cccCCHHHCCC
Confidence 999999999999999999999999874 7999987 8999999999999999997 89999999999
Q ss_pred eeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHH
Q 016236 199 CKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNAL 275 (392)
Q Consensus 199 ~~~v~i~---~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl 275 (392)
|++|++. +++|+||+||+++ ++|||+|||+|+++++|+||+++|||
T Consensus 344 a~~v~~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl 392 (545)
T 1a6d_A 344 AETVEERKIGDDRMTFVMGCKNP-------------------------------KAVSILIRGGTDHVVSEVERALNDAI 392 (545)
T ss_dssp EEEEEEEEETTEEEEEEEEESCS-------------------------------SCEEEEECCSSSTTHHHHHHHHHHHH
T ss_pred ceEEEEEEecCceEEEEecCCCC-------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHH
Confidence 9999864 7899999999865 58999999999999999999999999
Q ss_pred HHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC
Q 016236 276 HAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS 349 (392)
Q Consensus 276 ~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~ 349 (392)
|++|+++++| +|||||++|++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. +..
T Consensus 393 ~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~ 472 (545)
T 1a6d_A 393 RVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRI 472 (545)
T ss_dssp HHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCC
Confidence 9999999999 9999999999999999998865 899999999999999999999999999999999 999862 346
Q ss_pred CeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 350 DLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 350 ~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 473 ~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 515 (545)
T 1a6d_A 473 SVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRI 515 (545)
T ss_dssp TEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999997
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-70 Score=568.85 Aligned_cols=342 Identities=16% Similarity=0.189 Sum_probs=308.3
Q ss_pred ChHHHHHHHHhc-ccccCC--CHHHHHHHHHHhcC------CchhHHHHHHHHHHhhc---cCc-----e--EEEE--cC
Q 016236 1 MAADAVVRNLDC-QARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITIF--DR 59 (392)
Q Consensus 1 ~A~~~~l~~L~~-~a~~v~--~~~~l~~Va~ts~~------~~~~~~~li~~a~~~vg---~~g-----~--I~v~--~g 59 (392)
+|++.++++|++ +++|++ +++.|.+||+||++ +++.|++++++|+.+|+ ++| . |+|+ .|
T Consensus 117 ~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G 196 (529)
T 3iyg_A 117 LACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHG 196 (529)
T ss_pred HHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecC
Confidence 478999999999 999987 68899999999986 36899999999999997 344 2 6664 67
Q ss_pred CCccceeEEEeeEEEecccccccccccccccceeecCceeeeccccc-------------CCHH-----------HHHHH
Q 016236 60 KALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSN-----------VIRQA 115 (392)
Q Consensus 60 ~~~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i-------------~~~~-----------~~~~~ 115 (392)
+++. ++++++||+||++|.||||++ .++||+|+++|+++ ++++ .+.++
T Consensus 197 ~~~~-ds~lv~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~ 268 (529)
T 3iyg_A 197 RSQM-ESMLINGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKER 268 (529)
T ss_pred CCcc-ceEEEeeeEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHH
Confidence 7764 599999999999999999964 68899999999864 3332 26788
Q ss_pred HHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCC-cCCCCCC
Q 016236 116 SLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPL 194 (392)
Q Consensus 116 l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~-~~~~~~~ 194 (392)
++++.++|+||||++++|+++++++|+.|+ |++||+. ++++|+|||++|||+++++..+++ .++++++
T Consensus 269 v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~~v-----~k~~leria~~tGa~iv~~~~~l~~~e~~~~~ 337 (529)
T 3iyg_A 269 IQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVRRV-----LKRDLKRIAKASGATVLSTLANLEGEETFEAS 337 (529)
T ss_pred HHHHHhcCCCEEEECCCCCHHHHHHHHHcC------CceeccC-----CHHHHHHHHHHhCCeeecchhcccchhccChh
Confidence 999999999999999999999999999874 8999988 888999999999999999976665 3567789
Q ss_pred CceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHH
Q 016236 195 KLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKI 271 (392)
Q Consensus 195 ~LG~~~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i 271 (392)
+||+|+.|+ +++++|+||+||+++ ++|||+|||+|+++++|+||++
T Consensus 338 ~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l 386 (529)
T 3iyg_A 338 MLGQAEEVVQERICDDELILIKNTKAR-------------------------------TSASVILRGANDFMCDEMERSL 386 (529)
T ss_pred hCccceEEEEEEeCCceEEEEEcCCCC-------------------------------ceEEEEECCchHHHHHHHHHHH
Confidence 999999997 789999999999876 4899999999999999999999
Q ss_pred HHHHHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc--
Q 016236 272 TNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ-- 346 (392)
Q Consensus 272 ~DAl~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~-- 346 (392)
|||||++|+++++| +||||||+|+++|.+|++++.+ ++++|+|+++|++||+.||++||+|||+||.++ .+|++.
T Consensus 387 ~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~ 466 (529)
T 3iyg_A 387 HDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHN 466 (529)
T ss_pred HHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 99999999999999 9999999999999999999876 899999999999999999999999999999999 999863
Q ss_pred -CC--------CCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 347 -DS--------SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 347 -~~--------~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+. .++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 467 ~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~i 521 (529)
T 3iyg_A 467 EAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRI 521 (529)
T ss_pred ccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 22 57999999999999999999999999999999999999999997
No 15
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.6e-70 Score=571.02 Aligned_cols=337 Identities=20% Similarity=0.281 Sum_probs=310.1
Q ss_pred ChHHHHHHHHhcccccCCC--HHHHHHHHHHhcC------CchhHHHHHHHHHHhhccC--c-------eEEEE--cCCC
Q 016236 1 MAADAVVRNLDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKA 61 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~~--~~~l~~Va~ts~~------~~~~~~~li~~a~~~vg~~--g-------~I~v~--~g~~ 61 (392)
+|++.++++|+++++|++. .+.|.+||+||++ +++.|++++++|+.+++++ | .|+|+ +|++
T Consensus 128 ~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~ 207 (543)
T 1a6d_B 128 MASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGA 207 (543)
T ss_dssp HHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSC
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCC
Confidence 4789999999999999974 7889999998875 3688999999999999876 5 38887 8988
Q ss_pred ccceeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHHHH-----------HHHHH
Q 016236 62 LYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASL 117 (392)
Q Consensus 62 ~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~~-----------~~~l~ 117 (392)
+. ++++++||+||++|.||||+ + +++||+|+++|++ |++++++ .++++
T Consensus 208 ~~-ds~lv~G~v~dk~~~~~~m~---~----~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le 279 (543)
T 1a6d_B 208 ID-DTQLINGIIVDKEKVHPGMP---D----VVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVD 279 (543)
T ss_dssp GG-GCEEESEEEESCCCSSTTSC---S----EEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred cc-ceeEEccEEEecCCCCCCCc---c----eecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 85 58999999999999999994 2 6899999999998 7777665 89999
Q ss_pred HHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCce
Q 016236 118 PCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLG 197 (392)
Q Consensus 118 ~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG 197 (392)
++.++|+||||++++|+++++++|+.|+ |++|++. ++++|+|||++|||+++++ ++++++++||
T Consensus 280 ~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~~v-----~k~~le~ia~~tGa~iis~-----l~~l~~~~LG 343 (543)
T 1a6d_B 280 KIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVRRV-----KKSDMDKLAKATGASIVST-----IDEISSSDLG 343 (543)
T ss_dssp HHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHTCCEESC-----GGGCCGGGCE
T ss_pred HHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEeccC-----CHHHHHHHHHHhCCceecc-----cccCCHHHCC
Confidence 9999999999999999999999999874 7999988 8999999999999999997 8999999999
Q ss_pred eeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHH
Q 016236 198 SCKRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNA 274 (392)
Q Consensus 198 ~~~~v~i---~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DA 274 (392)
+|++|++ ++++|+||+||+++ ++|||+|||+|+++++|+||+++||
T Consensus 344 ~a~~v~~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DA 392 (543)
T 1a6d_B 344 TAERVEQVKVGEDYMTFVTGCKNP-------------------------------KAVSILVRGETEHVVDEMERSITDS 392 (543)
T ss_dssp EEEEEEEEEETTEEEEEEEEESSS-------------------------------SCEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CceEEEEEEecCceEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHH
Confidence 9999986 58999999999875 5899999999999999999999999
Q ss_pred HHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC
Q 016236 275 LHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS 348 (392)
Q Consensus 275 l~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~ 348 (392)
||++|+++++| +|||||++|++++.+|++++.+ ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +.
T Consensus 393 l~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 472 (543)
T 1a6d_B 393 LHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGN 472 (543)
T ss_dssp HHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCC
Confidence 99999999999 9999999999999999998764 889999999999999999999999999999999 999862 44
Q ss_pred CCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 349 SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 349 ~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 473 ~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 516 (543)
T 1a6d_B 473 KTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRI 516 (543)
T ss_dssp TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHE
T ss_pred CCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999986
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.7e-70 Score=563.81 Aligned_cols=344 Identities=17% Similarity=0.191 Sum_probs=302.6
Q ss_pred ChHHHHHHHHhcccccCCC----HHHHHHHHHHhcCC------chhHHHHHHHHHHhhccC-------ceEEEE--cCCC
Q 016236 1 MAADAVVRNLDCQARKITT----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKA 61 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~~----~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~-------g~I~v~--~g~~ 61 (392)
+|++.++++|+++++|++. ++.|.+||+||+++ .+.|++++++|+..|.+. +.|+|+ .|++
T Consensus 117 ~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs 196 (515)
T 3iyg_E 117 QAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGR 196 (515)
T ss_pred HHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCC
Confidence 4789999999999998853 68899999999985 368899999999988641 346665 5888
Q ss_pred ccceeEEEeeEEEecccccccccccccc-cceeecCceeee-----cccccCCHHHH-----------HHHHHHHHhcCC
Q 016236 62 LYNELNFVKGMKLEWGLKSPYFFTHKNK-KECVLDGALVLI-----YDTKISNSNVI-----------RQASLPCMMQGQ 124 (392)
Q Consensus 62 ~~~~~~~v~G~~~d~g~~s~~~~~~~~~-~~~~l~~~~Il~-----~d~~i~~~~~~-----------~~~l~~i~~~g~ 124 (392)
+. ++++++||+||++|.||||+++.+. +...+++|+.+. ++.+|++++++ .++++++.++|+
T Consensus 197 ~~-ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~ 275 (515)
T 3iyg_E 197 LE-DTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGA 275 (515)
T ss_pred cc-cceEEeeEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 75 5899999999999999999875443 222334444333 23356777765 788999999999
Q ss_pred CEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEE
Q 016236 125 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA 204 (392)
Q Consensus 125 ~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i 204 (392)
||||++++|+++++++|+.|+ +.+++++ ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 276 ~vvi~~~~I~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~ 339 (515)
T 3iyg_E 276 NLAVCQWGFDDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKE 339 (515)
T ss_pred CEEEEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEE
Confidence 999999999999999999875 6789999 6888999999999999998 89999999999999986
Q ss_pred -----ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHHHH
Q 016236 205 -----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 279 (392)
Q Consensus 205 -----~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r 279 (392)
++++|+||+||+++. .|||+|||+|+++++|+||+++||||++|
T Consensus 340 ~~ig~~k~~~~~~~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~i~DAl~~~r 388 (515)
T 3iyg_E 340 ISFGTTKDKMLVIEQCKNSR-------------------------------AVTIFIRGGNKMIIEEAKRSLHDALCVIR 388 (515)
T ss_pred EEeccccceEEEEEcCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHH
Confidence 458999999999764 78999999999999999999999999999
Q ss_pred HHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCee
Q 016236 280 AAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLG 352 (392)
Q Consensus 280 ~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~----~~~~~G 352 (392)
+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+||.++ .+|++. +++++|
T Consensus 389 ~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G 468 (515)
T 3iyg_E 389 NLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALG 468 (515)
T ss_pred HHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeee
Confidence 999999 9999999999999999998876 899999999999999999999999999999999 999862 346799
Q ss_pred EeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 353 YNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 353 ~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 469 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 508 (515)
T 3iyg_E 469 IDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKI 508 (515)
T ss_pred EecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999999999986
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2.9e-71 Score=574.49 Aligned_cols=341 Identities=15% Similarity=0.146 Sum_probs=308.1
Q ss_pred ChHHHHHHHHhcccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHhhcc--CceEEEE-------cCCCcc
Q 016236 1 MAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITIF-------DRKALY 63 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~--~g~I~v~-------~g~~~~ 63 (392)
+|++.++++|+++++|++ +++.|.+||+||+++ ++.|++++++|+.+|++ +|.|+++ +|+++.
T Consensus 126 ~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ 205 (528)
T 3p9d_D 126 SAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID 205 (528)
T ss_dssp HHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC
T ss_pred HHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc
Confidence 378999999999999998 789999999999985 68999999999999986 4655444 388875
Q ss_pred ceeEEEeeEEEecccccccccccccccceeecCceeeecccccC-------------CHH-----------HHHHHHHHH
Q 016236 64 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPC 119 (392)
Q Consensus 64 ~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~-----------~~~~~l~~i 119 (392)
++++++||+||++|.|||| |..+++||+|+++|++++ +++ .+.++++++
T Consensus 206 -ds~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I 278 (528)
T 3p9d_D 206 -DTEMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKI 278 (528)
T ss_dssp -CCEEESSCBCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHH
T ss_pred -ceEEEeeeEEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999994 234799999999999865 443 378999999
Q ss_pred HhcCCCEEEEecCc-----chhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCC
Q 016236 120 MMQGQSLLVVAEDV-----ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPL 194 (392)
Q Consensus 120 ~~~g~~lvi~~~~i-----~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~ 194 (392)
.++|+||||++++| +++++++|..|+ |++||++ ++++|+|||++|||+++++ +++++++
T Consensus 279 ~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----~~~l~~~ 342 (528)
T 3p9d_D 279 KKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVVKDI-----EREEIEFLSKGLGCKPIAD-----IELFTED 342 (528)
T ss_dssp HHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEEECC-----CTHHHHHHHHHHTCCCCSC-----STTCCSS
T ss_pred HhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEEEeC-----CHHHHHHHHHHHCCEEecc-----cccCCHH
Confidence 99999999999999 999999999763 7999988 7889999999999999998 7899999
Q ss_pred CceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHH
Q 016236 195 KLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKI 271 (392)
Q Consensus 195 ~LG~~~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i 271 (392)
+||+|++|+ ++++++++|.||.... .+++|||+|||+|+++++|+||++
T Consensus 343 ~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i 394 (528)
T 3p9d_D 343 RLDSADLVEEIDSDGSKIVRVTGIRNNN----------------------------ARPTVSVVIRGANNMIIDETERSL 394 (528)
T ss_dssp SEEEESCEECCEETTEECCBCTTBCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHH
T ss_pred HCCcccEEEEEEECCEEEEEEEcccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHH
Confidence 999999997 4577889999987311 147999999999999999999999
Q ss_pred HHHHHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc--
Q 016236 272 TNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ-- 346 (392)
Q Consensus 272 ~DAl~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~-- 346 (392)
+||||++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+||.++ .+|++.
T Consensus 395 ~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~ 474 (528)
T 3p9d_D 395 HDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHE 474 (528)
T ss_dssp TTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 99999999999999 9999999999999999998876 899999999999999999999999999999999 999873
Q ss_pred -CCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 347 -DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 347 -~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+++++|||+.+|+|.||++.|||||+.||+++|++|+++|++||||
T Consensus 475 ~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 521 (528)
T 3p9d_D 475 NGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRI 521 (528)
T ss_dssp SSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhh
Confidence 3567999999999999999999999999999999999999999987
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-69 Score=561.76 Aligned_cols=337 Identities=17% Similarity=0.201 Sum_probs=300.6
Q ss_pred ChHHHHHHHHhcccccCC--CHHHHHHHHHHhcCCc------hhHHHHHHHHHHhhcc---Cce-----EEEE--cCCCc
Q 016236 1 MAADAVVRNLDCQARKIT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITIF--DRKAL 62 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~~~~l~~Va~ts~~~~------~~~~~li~~a~~~vg~---~g~-----I~v~--~g~~~ 62 (392)
+|++.++++|+++++|++ +++.|.+||+||++++ +.|++++++|+.++++ +|. |+|+ .|++.
T Consensus 118 ~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~ 197 (518)
T 3iyg_D 118 KALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTI 197 (518)
T ss_pred HHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCCh
Confidence 478999999999999998 7889999999999975 8999999999999985 554 7776 56766
Q ss_pred cceeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHH-----------HHHHHHHH
Q 016236 63 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSN-----------VIRQASLP 118 (392)
Q Consensus 63 ~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~-----------~~~~~l~~ 118 (392)
+++++++||+||++|.| .|+ + .++||+|++++++ |++++ ++.+++++
T Consensus 198 -~ds~lv~G~~~dk~~~~-~mp---~----~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~ 268 (518)
T 3iyg_D 198 -DDCELVEGLVLTQKVAN-SGI---T----RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQ 268 (518)
T ss_pred -hhheEeccEEEeccccc-CCC---c----cccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 56999999999999998 332 1 3566666666654 45554 47889999
Q ss_pred HHhcCCCEEEE-----ecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCC
Q 016236 119 CMMQGQSLLVV-----AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVP 193 (392)
Q Consensus 119 i~~~g~~lvi~-----~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~ 193 (392)
+.++|+||||+ +++|+++++++|+.| +|++||+| ++.+|+|||++|||+++++ ++++++
T Consensus 269 I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~~~-----~~~~le~ia~~tGa~ii~~-----l~~l~~ 332 (518)
T 3iyg_D 269 IKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVKDI-----EREDIEFICKTIGTKPVAH-----VDQFTA 332 (518)
T ss_pred HHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEecC-----CHHHHHHHHHHhCCEEecc-----cccCCH
Confidence 99999999999 899999999999976 48999999 5667999999999999998 899999
Q ss_pred CCceeeeEEEE---ec-ceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHH
Q 016236 194 LKLGSCKRVIA---TM-DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKL 269 (392)
Q Consensus 194 ~~LG~~~~v~i---~~-~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r 269 (392)
++||+|++|++ ++ ++++||+||++. +++|||+|||+|+++++|+||
T Consensus 333 ~~LG~a~~v~~~~~g~~~~~~~~~g~~~~------------------------------~~~~tI~lrG~te~~l~E~kr 382 (518)
T 3iyg_D 333 DMLGSAELAEEVSLNGSGKLIKITGCASP------------------------------GKTVTIVVRGSNKLVIEEAER 382 (518)
T ss_pred HHCCcCcEEEEEEeCCCceEEEEECCCCC------------------------------CceEEEEECCCCHHHHHHHHH
Confidence 99999999975 45 688999999752 369999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh-
Q 016236 270 KITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE- 345 (392)
Q Consensus 270 ~i~DAl~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~- 345 (392)
+++||||++|+++++| +|||||++|++++.+|++++.+ ++++|+|+++|++||+.||++||+|||+||.++ .+|++
T Consensus 383 ~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 462 (518)
T 3iyg_D 383 SIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNR 462 (518)
T ss_pred HHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9999999999999998 9999999999999999998776 899999999999999999999999999999999 99987
Q ss_pred --cCCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 346 --QDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 346 --~~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
++++++|||+.+|+|.||++.|||||+.||+++|++|+++|++||||
T Consensus 463 h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (518)
T 3iyg_D 463 HAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKI 511 (518)
T ss_pred HhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhh
Confidence 24567999999999999999999999999999999999999999997
No 19
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2e-70 Score=568.56 Aligned_cols=336 Identities=19% Similarity=0.217 Sum_probs=306.6
Q ss_pred ChHHHHHHHHhcccccCCC-----HHHHHHHHHHhcCC------chhHHHHHHHHHHhhccCc---eEEEE--cCCCccc
Q 016236 1 MAADAVVRNLDCQARKITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITIF--DRKALYN 64 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~~-----~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~g---~I~v~--~g~~~~~ 64 (392)
+|++.++++|+++++|+++ +++|.+||+||+++ ++.||+++++|+.+|++++ .|+|+ .|++. +
T Consensus 126 ~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~-~ 204 (527)
T 3p9d_B 126 LASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKL-S 204 (527)
T ss_dssp HHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSS-S
T ss_pred HHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCc-c
Confidence 4789999999999999985 68899999999986 6899999999999999887 78887 47776 4
Q ss_pred eeEEEeeEEEecccccccccccccccceeecCceeeecccc--------------cCCHHHH-----------HHHHHHH
Q 016236 65 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK--------------ISNSNVI-----------RQASLPC 119 (392)
Q Consensus 65 ~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~--------------i~~~~~~-----------~~~l~~i 119 (392)
++++++||+||++|.||| |+ .++||+|++++++ +++++++ ++.++++
T Consensus 205 ds~lv~G~~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I 276 (527)
T 3p9d_B 205 DSFLDEGFILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKI 276 (527)
T ss_dssp CCCEESSCCCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEeEEEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999998 44 4689999998764 3445544 6889999
Q ss_pred HhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceee
Q 016236 120 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 199 (392)
Q Consensus 120 ~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~ 199 (392)
.++|+||||++++|++.++++|..|+ |++||+| ++.+|+|||++|||+++++ ++++++++||+|
T Consensus 277 ~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~-----~~~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a 340 (527)
T 3p9d_B 277 SKFGINTFINRQLIYDYPEQLFTDLG------INSIEHA-----DFEGVERLALVTGGEVVST-----FDEPSKCKLGEC 340 (527)
T ss_dssp TTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCC-----HHHHHHHHHHHTCCCCCST-----TSCCTTSCEECS
T ss_pred HhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHHHCCCC
Confidence 99999999999999999999999874 7999999 6677999999999999998 889999999999
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHH
Q 016236 200 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 276 (392)
Q Consensus 200 ~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~ 276 (392)
+.|+ ++++++++|.||+++ ++|||+|||+|+++++|+||+++||||
T Consensus 341 ~~v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~ 389 (527)
T 3p9d_B 341 DVIEEIMLGEQPFLKFSGCKAG-------------------------------EACTIVLRGATDQTLDEAERSLHDALS 389 (527)
T ss_dssp BCCBCCCSSSCCBCCBCSSCCS-------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHH
T ss_pred cEEEEEEecceEEEEEECCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHH
Confidence 9997 678999999999864 699999999999999999999999999
Q ss_pred HHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCC
Q 016236 277 AVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSD 350 (392)
Q Consensus 277 a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~ 350 (392)
++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+||.++ .+|++. ++++
T Consensus 390 ~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~ 469 (527)
T 3p9d_B 390 VLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGIST 469 (527)
T ss_dssp HHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCc
Confidence 999999999 9999999999999999998765 889999999999999999999999999999999 999863 4568
Q ss_pred eeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 351 LGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 351 ~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+|||+.+|+|.||++.|||||+.||+++|++|+|+|++||||
T Consensus 470 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (527)
T 3p9d_B 470 SGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRV 511 (527)
T ss_dssp CCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHC
T ss_pred eeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999999999999986
No 20
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.5e-70 Score=569.65 Aligned_cols=339 Identities=17% Similarity=0.165 Sum_probs=304.5
Q ss_pred ChHHHHHHHHhcccccCC--C---HHHHHHHHHHhcC------CchhHHHHHHHHHHhhcc-C------ceEEEEcCCCc
Q 016236 1 MAADAVVRNLDCQARKIT--T---FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITIFDRKAL 62 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~---~~~l~~Va~ts~~------~~~~~~~li~~a~~~vg~-~------g~I~v~~g~~~ 62 (392)
+|++.++++|+++++|++ + ++.|.+||+||++ +++.|++++++|+.+|++ + +.++++ |+++
T Consensus 131 ~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~-Gg~~ 209 (550)
T 3p9d_G 131 KAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIP-GGAM 209 (550)
T ss_dssp HHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCC-SSCG
T ss_pred HHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEec-CCCc
Confidence 378999999999999986 3 6689999999975 368999999999999984 3 455554 8887
Q ss_pred cceeEEEeeEEEecccccccccccccccceeecCceeeecccc-------------cCCHHHHH-----------HHHHH
Q 016236 63 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIR-----------QASLP 118 (392)
Q Consensus 63 ~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~-------------i~~~~~~~-----------~~l~~ 118 (392)
+| +++++||+||++|.||||++.|+ .++||||+++|++ |++++++. +++++
T Consensus 210 ~d-s~lv~G~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~ 284 (550)
T 3p9d_G 210 EE-SLFINGVAFKKTFSYAGFEQQPK----KFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQ 284 (550)
T ss_dssp GG-CCCCSSEEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHH
T ss_pred cc-eeEEeeEEEeccccccccccCcc----cccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 65 69999999999999999988777 4999999999997 45665554 46788
Q ss_pred HHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCcee
Q 016236 119 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 198 (392)
Q Consensus 119 i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~ 198 (392)
|+++|++|||++++|++.++++|..+ +|+++++. ++.+|+|||++|||+++++ ++++++++||+
T Consensus 285 I~~~g~~vVi~~~~I~dla~~~L~~~------gI~~v~~v-----~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~ 348 (550)
T 3p9d_G 285 VEETGANIVLSKLPIGDLATQFFADR------NIFCAGRV-----SADDMNRVIQAVGGSIQST-----TSDIKPEHLGT 348 (550)
T ss_dssp HHTTTCSEEEESSCCCHHHHHTTGGG------TCEEEECC-----CTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCC
T ss_pred HHhcCCCEEEECCCccHHHHHHHHHc------CCccccCc-----CHHHHHHHHHHhCCceecc-----hhhCCHHHcCC
Confidence 99999999999999999999988854 47889888 7889999999999999998 89999999999
Q ss_pred eeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHH
Q 016236 199 CKRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNAL 275 (392)
Q Consensus 199 ~~~v~i---~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl 275 (392)
|+.|++ +++++++|.||+++ ++|||+|||+|+++++|+||+++|||
T Consensus 349 a~~v~~~~ig~e~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl 397 (550)
T 3p9d_G 349 CALFEEMQIGSERYNLFQGCPQA-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAI 397 (550)
T ss_dssp CSBCCCCCCSSSCCEEEBCCTTC-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCeEEEEEecCCCC-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHH
Confidence 999975 78899999999865 48999999999999999999999999
Q ss_pred HHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC
Q 016236 276 HAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS 349 (392)
Q Consensus 276 ~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~ 349 (392)
|++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ ++|++. +++
T Consensus 398 ~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~ 477 (550)
T 3p9d_G 398 MIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEK 477 (550)
T ss_dssp HHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Confidence 9999999999 9999999999999999998765 899999999999999999999999999999999 999863 456
Q ss_pred CeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 350 DLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 350 ~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
++|||+.+|+|.||++.|||||+.||+++|++|+|+|++||+|
T Consensus 478 ~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 520 (550)
T 3p9d_G 478 WYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSV 520 (550)
T ss_dssp CCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred ceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 8999999999999999999999999999999999999999986
No 21
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-68 Score=552.63 Aligned_cols=343 Identities=15% Similarity=0.200 Sum_probs=299.6
Q ss_pred ChHHHHHHHHhcc----cccCCCHHHHHHHHHHhcCC-----chhHHHHHHHHHHhhccC-ceEEEE-------cCCCcc
Q 016236 1 MAADAVVRNLDCQ----ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITIF-------DRKALY 63 (392)
Q Consensus 1 ~A~~~~l~~L~~~----a~~v~~~~~l~~Va~ts~~~-----~~~~~~li~~a~~~vg~~-g~I~v~-------~g~~~~ 63 (392)
+|++.++++|+++ +.+++++++|.+||+||+++ ++.||+++++|+.+++++ +.|+++ .|+++
T Consensus 118 ~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~- 196 (512)
T 3iyg_Q 118 IACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV- 196 (512)
T ss_pred HHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-
Confidence 4789999999998 56777899999999999987 789999999999999876 455543 38887
Q ss_pred ceeEEEeeEEEecccccccccccccccce-eecCce-eeecccc----cCCHHHHHHH-------HH----HHHhcCCCE
Q 016236 64 NELNFVKGMKLEWGLKSPYFFTHKNKKEC-VLDGAL-VLIYDTK----ISNSNVIRQA-------SL----PCMMQGQSL 126 (392)
Q Consensus 64 ~~~~~v~G~~~d~g~~s~~~~~~~~~~~~-~l~~~~-Il~~d~~----i~~~~~~~~~-------l~----~i~~~g~~l 126 (392)
+++++++||+||++|.| |+++.+..++ .+++|+ +..++.+ |++++++.|+ |+ ++.++|+||
T Consensus 197 ~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~v 274 (512)
T 3iyg_Q 197 HSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANV 274 (512)
T ss_pred ccceEEeeEEEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 67999999999999976 7664432222 234444 4444444 7788888776 55 899999999
Q ss_pred EEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEE--
Q 016236 127 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 204 (392)
Q Consensus 127 vi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i-- 204 (392)
||++++|++.++++|.. .+|++||+| ++.+|+|||++|||+++++ ++++++++||+|++|++
T Consensus 275 vi~~~~I~~la~~~l~k------~~I~av~~~-----~~~dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~ 338 (512)
T 3iyg_Q 275 VVTGGRVADMALHYANK------YNIMLVRLN-----SKWDLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSE 338 (512)
T ss_pred EEECCCccHHHHHHHHH------CCeEEEEeC-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEE
Confidence 99999999999998875 358999999 4667999999999999998 89999999999999975
Q ss_pred -ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHHHHHHHH
Q 016236 205 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 283 (392)
Q Consensus 205 -~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~al~ 283 (392)
+++++++|.+|+. +|++|||+|||+|+++++|+||+++||||++|++++
T Consensus 339 ~g~~~~~~~~~~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~ 388 (512)
T 3iyg_Q 339 VGDTQVVVFKHEKE------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTR 388 (512)
T ss_pred eCCeEEEEEEcccC------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4668999999863 247999999999999999999999999999999999
Q ss_pred cC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 016236 284 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 357 (392)
Q Consensus 284 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 357 (392)
+| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+||.++ .+|++. +++++|||+.+
T Consensus 389 ~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 468 (512)
T 3iyg_Q 389 DKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEA 468 (512)
T ss_pred CCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCC
Confidence 99 9999999999999999998865 889999999999999999999999999999999 999863 45789999996
Q ss_pred C--ccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 358 G--NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 358 g--~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
| +|.||++.|||||+.||+++|++|+++|++||||
T Consensus 469 ~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 505 (512)
T 3iyg_Q 469 EVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRV 505 (512)
T ss_pred CCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhH
Confidence 5 9999999999999999999999999999999986
No 22
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.5e-69 Score=563.31 Aligned_cols=343 Identities=19% Similarity=0.205 Sum_probs=301.9
Q ss_pred ChHHHHHHHHhcccccCCCH------HHHHHHHHHhcCC------chhHHHHHHHHHHhhccC-------ceEEEE--cC
Q 016236 1 MAADAVVRNLDCQARKITTF------EEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DR 59 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~~~------~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~-------g~I~v~--~g 59 (392)
+|++.++++|+++++|+++. +.|.+||+||+++ .+.|++++++|+..|.+. +.|+|+ .|
T Consensus 152 ~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~G 231 (562)
T 3p9d_E 152 EAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVG 231 (562)
T ss_dssp HHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESS
T ss_pred HHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecC
Confidence 37899999999999998632 6899999999985 368999999999998652 356665 58
Q ss_pred CCccceeEEEeeEEEecccccccccccccccceeecCceeeeccc-------------ccCCHHH-----------HHHH
Q 016236 60 KALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQA 115 (392)
Q Consensus 60 ~~~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~-----------~~~~ 115 (392)
+++.| +++++||+||++|.||||+++.+ .+..++||+|+++++ +|+++++ +.++
T Consensus 232 gs~~d-s~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~ 309 (562)
T 3p9d_E 232 GSISD-SKLINGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEM 309 (562)
T ss_dssp SCGGG-CEEESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHH
T ss_pred CChhh-hceeeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHH
Confidence 88854 89999999999999999988551 111236677766665 3555555 6799
Q ss_pred HHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCC
Q 016236 116 SLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK 195 (392)
Q Consensus 116 l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~ 195 (392)
++++.++|+||||++++|+++++++|+.|+ |.+|+++ ++++|+|||++|||+++++ ++++++++
T Consensus 310 lekI~~~g~~vvI~~~~I~~~Al~~L~~~~------I~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~ 373 (562)
T 3p9d_E 310 IDDVKKAGADVVICQWGFDDEANHLLLQND------LPAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDK 373 (562)
T ss_dssp HHHHHHHTCSCCEECSSCCSHHHHHHHTTT------CCCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTS
T ss_pred HHHHHHcCCcEEEEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHH
Confidence 999999999999999999999999999886 4568998 6788999999999999998 89999999
Q ss_pred ceeeeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHH
Q 016236 196 LGSCKRVIA-----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLK 270 (392)
Q Consensus 196 LG~~~~v~i-----~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~ 270 (392)
||+|++|++ ++++|+||+||++++ .|||+|||+|+++++|+||+
T Consensus 374 LG~a~~v~~~~ig~~~~~~~~i~g~~~~~-------------------------------~~TIllrG~te~~l~E~kr~ 422 (562)
T 3p9d_E 374 LGTCSRIYEQEFGTTKDRMLIIEQSKETK-------------------------------TVTCFVRGSNKMIVDEAERA 422 (562)
T ss_dssp CEECSCEEEECCSSSSCCEEEECCCSCCS-------------------------------CCEEEEECTTTTTHHHHTHH
T ss_pred CCcceEEEEEEeccCCceEEEEecCCCCC-------------------------------eEEEEEeCCCHHHHHHHHHH
Confidence 999999987 368999999998764 78999999999999999999
Q ss_pred HHHHHHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-
Q 016236 271 ITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ- 346 (392)
Q Consensus 271 i~DAl~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~- 346 (392)
++||||++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+||.++ .+|++.
T Consensus 423 i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h 502 (562)
T 3p9d_E 423 LHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQ 502 (562)
T ss_dssp HHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999998765 889999999999999999999999999999999 999862
Q ss_pred ---CCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 347 ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 347 ---~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+++++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 503 ~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 551 (562)
T 3p9d_E 503 LKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKI 551 (562)
T ss_dssp HHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred hhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999986
No 23
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-68 Score=549.95 Aligned_cols=337 Identities=12% Similarity=0.175 Sum_probs=301.8
Q ss_pred ChHHHHHHHHhcccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHhhccC--c--------eEEEE--cCC
Q 016236 1 MAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D--------LITIF--DRK 60 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~--~~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~--g--------~I~v~--~g~ 60 (392)
+|++.++++|+++++|++ +++.|.+||+||+++ .+.+++++++|+..|.++ + .|.|+ +|+
T Consensus 116 ~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Gg 195 (515)
T 3iyg_G 116 KALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGG 195 (515)
T ss_pred HHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCC
Confidence 478999999999999987 468899999999974 256778999999988622 2 25564 688
Q ss_pred CccceeEEEeeEEEecccccccccccccccceeecCceeeeccc-------------ccCCHHHHHHHHH----------
Q 016236 61 ALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVIRQASL---------- 117 (392)
Q Consensus 61 ~~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~-------------~i~~~~~~~~~l~---------- 117 (392)
++ +++++++||+||++|.||+|+ .+++||||+++|+ +|++++++.++++
T Consensus 196 s~-~ds~lv~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v 267 (515)
T 3iyg_G 196 II-EDSCVLRGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLC 267 (515)
T ss_pred Cc-ccceEEeeEEEeCCCCCCCCc-------ceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 87 469999999999999999874 3799999999998 6778888888877
Q ss_pred -HHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCc
Q 016236 118 -PCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 196 (392)
Q Consensus 118 -~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~L 196 (392)
++.++|.+|||++++|++.++++|..+ +|+++++. ++++|+|||++|||+++++ ++++++++|
T Consensus 268 ~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av~~~-----~k~~leria~~tGa~ii~~-----l~~l~~~~L 331 (515)
T 3iyg_G 268 EDIIQLKPDVVITEKGISDLAQHYLMRA------NITAIRRV-----RKTDNNRIARACGARIVSR-----PEELREEDV 331 (515)
T ss_pred HHHHhCCCCEEEECCccCHHHHHHHHHC------CceeeccC-----CHHHHHHHHHHhCCeeecc-----ccccChhhc
Confidence 899999888888889999999999864 47889887 8889999999999999998 899999999
Q ss_pred ee-eeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHHHHHH
Q 016236 197 GS-CKRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKIT 272 (392)
Q Consensus 197 G~-~~~v~i---~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~ 272 (392)
|+ |+.|++ ++++|+||+||+++. .|||+|||+|+++++|+||++|
T Consensus 332 G~~a~~v~~~~~g~~~~~~i~g~~~~~-------------------------------~~TIllrG~t~~~l~E~er~i~ 380 (515)
T 3iyg_G 332 GTGAGLLEIKKIGDEYFTFITECKDPK-------------------------------ACTILLRGASKEILSEVERNLQ 380 (515)
T ss_pred CCcccEEEEEEECCceEEEEeCCCCCC-------------------------------eEEEEEcCCCHHHHHHHHHHHH
Confidence 99 999975 466899999999864 8999999999999999999999
Q ss_pred HHHHHHHHHHHc-CcccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---
Q 016236 273 NALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ--- 346 (392)
Q Consensus 273 DAl~a~r~al~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~--- 346 (392)
||||++|+++++ ++|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+||.++ .+|++.
T Consensus 381 Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~ 460 (515)
T 3iyg_G 381 DAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ 460 (515)
T ss_pred HHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh
Confidence 999999999976 59999999999999999998766 899999999999999999999999999999999 999863
Q ss_pred -CCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 347 -DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 347 -~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+++++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 461 ~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~i 507 (515)
T 3iyg_G 461 ENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRI 507 (515)
T ss_pred cCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 2457999999999999999999999999999999999999999986
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-68 Score=552.55 Aligned_cols=336 Identities=18% Similarity=0.257 Sum_probs=293.6
Q ss_pred ChHHHHHHHHhcccccCC-CHHHHHHHHHHhcCC------chhHHHHHHHHHHhhccCc------eEEEE--cCCCccce
Q 016236 1 MAADAVVRNLDCQARKIT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITIF--DRKALYNE 65 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~-~~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~g------~I~v~--~g~~~~~~ 65 (392)
+|++.++++|+++++|++ +++.|.+||+||+++ .+.|++++++|+..+.+.+ .|.|. +|++. ++
T Consensus 117 ~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~-~d 195 (517)
T 3iyg_Z 117 AAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE-TD 195 (517)
T ss_pred HHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCc-cc
Confidence 478999999999999988 788999999999985 3678888888888775432 24443 56665 56
Q ss_pred eEEEeeEEEecccccccccccccccceeecCceeeecccccC-------------CHHHH-----------HHHHHHHHh
Q 016236 66 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNVI-----------RQASLPCMM 121 (392)
Q Consensus 66 ~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~~~-----------~~~l~~i~~ 121 (392)
+++++||+||++|.||||+ .+++||+|+++|++++ +++++ ...++.+..
T Consensus 196 s~lv~G~v~dk~~~~p~m~-------~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~ 268 (517)
T 3iyg_Z 196 TSLIRGLVLDHGARHPDMK-------KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIE 268 (517)
T ss_pred cceEeeEEEeccCCCCCcc-------ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999974 3799999999998753 33332 234444443
Q ss_pred --------cCCCEEEEe-cCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCC
Q 016236 122 --------QGQSLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFV 192 (392)
Q Consensus 122 --------~g~~lvi~~-~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~ 192 (392)
.++|+||++ ++|++.++++|..+ +|++||++ ++.+|+|||++|||+++++ +++++
T Consensus 269 ~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~v~~v-----~~~~leria~~tGa~iv~~-----l~~l~ 332 (517)
T 3iyg_Z 269 LKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIALRRA-----KRRNMERLTLACGGIALNS-----LDDLN 332 (517)
T ss_pred hhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEEEEec-----CHHHHHHHHHHhCCEEecc-----hhhCc
Confidence 356777665 89999999999975 37999998 6788999999999999997 89999
Q ss_pred CCC-ceeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhHH
Q 016236 193 PLK-LGSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKK 268 (392)
Q Consensus 193 ~~~-LG~~~~v---~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~~ 268 (392)
+++ ||+|+ | .+++++|+||+||++++ .|||+|||+|+++++|+|
T Consensus 333 ~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~-------------------------------~~TI~lrG~t~~~l~E~k 380 (517)
T 3iyg_Z 333 PDCLLGHAG-VYEYTLGEEKFTFIEKCNNPR-------------------------------SVTLLIKGPNKHTLTQIK 380 (517)
T ss_pred ccccCCcce-EEEEEEcCceEEEEeCCCCch-------------------------------hheeeecCCcHHHHHHHH
Confidence 999 99999 9 57899999999999875 679999999999999999
Q ss_pred HHHHHHHHHHHHHHHcC-cccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh
Q 016236 269 LKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE 345 (392)
Q Consensus 269 r~i~DAl~a~r~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~ 345 (392)
|+++||||++|+++++| +|||||++|++++.+|++++.+ ++++|+|+++|++||+.+|++||+|||+||.++ .+|++
T Consensus 381 r~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~ 460 (517)
T 3iyg_Z 381 DAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQA 460 (517)
T ss_pred HHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999876 899999999999999999999999999999999 99987
Q ss_pred c---CCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 346 Q---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 346 ~---~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
. +++++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 461 ~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 510 (517)
T 3iyg_Z 461 EHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLV 510 (517)
T ss_pred HHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 3 4568999999999999999999999999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=9.8e-68 Score=550.31 Aligned_cols=337 Identities=17% Similarity=0.243 Sum_probs=291.8
Q ss_pred ChHHHHHHHHhcccccCC----CHHHHHHHHHHhcCC------chhHHHHHHHHHHhhccC-------ceEEEE--cCCC
Q 016236 1 MAADAVVRNLDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKA 61 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v~----~~~~l~~Va~ts~~~------~~~~~~li~~a~~~vg~~-------g~I~v~--~g~~ 61 (392)
+|++.++++|+++++|++ +++.|.+||+||+++ .+.|++++++|+..|.+. ..|.+. +|++
T Consensus 124 ~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~ 203 (546)
T 3p9d_F 124 IARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLS 203 (546)
T ss_dssp HHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSC
T ss_pred HHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCC
Confidence 378999999999999884 678999999999985 478999999999988631 246665 5776
Q ss_pred ccceeEEEeeEEEecccccccccccccccceeecCceeeecccccCC-------------HH-----------HHHHHHH
Q 016236 62 LYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISN-------------SN-----------VIRQASL 117 (392)
Q Consensus 62 ~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i~~-------------~~-----------~~~~~l~ 117 (392)
. +++++++||+||++|.||+|+ .+++||||+++|++++. ++ .+...++
T Consensus 204 ~-~ds~lv~G~v~dk~~~~~~m~-------~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~ 275 (546)
T 3p9d_F 204 P-KDTTFIKGLVLDHGGRHPDMP-------TRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLK 275 (546)
T ss_dssp T-TTCCCCSSCEESCCCCSSSSC-------SSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHH
T ss_pred c-cccEEEeeEEEecccccccCc-------ceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 6 569999999999999999873 37999999999976532 21 1223455
Q ss_pred HHHh---------cCCCEEEE-ecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCC
Q 016236 118 PCMM---------QGQSLLVV-AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN 187 (392)
Q Consensus 118 ~i~~---------~g~~lvi~-~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~ 187 (392)
.+.. +|+|+||+ +++|+++++++|..|+ |+++|++ ++.+|+|||++|||+++++
T Consensus 276 ~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~v-----~~~~leria~~tGa~ii~~----- 339 (546)
T 3p9d_F 276 KIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRRA-----KRRNMERLQLVTGGEAQNS----- 339 (546)
T ss_dssp HHHHCC-----------CEEEESSCCCHHHHHHHTTTT------CEEECCC-----CHHHHHHHHHTTTBCCCCC-----
T ss_pred HHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEecC-----CHHHHHHHHHHhCCEEecc-----
Confidence 5554 46776655 4699999999999874 6899998 6778999999999999997
Q ss_pred cCCCCCCCceeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHH
Q 016236 188 STYFVPLKLGSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEV 264 (392)
Q Consensus 188 ~~~~~~~~LG~~~~v---~i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l 264 (392)
++++++++||+|++| .+++++|+||+||++++ .|||+|||+|++++
T Consensus 340 l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~tI~lrG~te~~l 388 (546)
T 3p9d_F 340 VEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPK-------------------------------SCTILIKGSTHYAL 388 (546)
T ss_dssp CSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCS-------------------------------CEEEECCCSCHHHH
T ss_pred hhhCCHhHCCcccEEEEEEecCceEEEEecCCCCc-------------------------------eEEEEECCCCHHHH
Confidence 899999999999999 57899999999999874 78999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHcC-cccCCcHHHHHHHHHHHH---hcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 016236 265 REKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV 339 (392)
Q Consensus 265 ~E~~r~i~DAl~a~r~al~~g-vVpGGGa~e~~~s~~L~~---~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~ 339 (392)
+|+||+++||||++|+++++| +|||||++|++++.+|++ ++.. ++++|+|+++|++||+.||++||+|||+||.+
T Consensus 389 ~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~ 468 (546)
T 3p9d_F 389 AQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLD 468 (546)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 999999999999999999999 999999999999999998 4655 89999999999999999999999999999999
Q ss_pred H-HHHHhc--------CCCCeeEeCCCCccccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 340 I-DKLLEQ--------DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 340 v-~~l~~~--------~~~~~G~d~~~g~~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
+ .+|++. +++++|||+.+|+|.||++.|||||+.||+++|++|+++|++||||
T Consensus 469 ~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 530 (546)
T 3p9d_F 469 VLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLC 530 (546)
T ss_dssp CCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 9 999863 4467999999999999999999999999999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6e-67 Score=546.03 Aligned_cols=337 Identities=15% Similarity=0.152 Sum_probs=297.9
Q ss_pred ChHHHHHHHHhcccccC----CCHHHHHHHHHHhcC-----CchhHHHHHHHHHHhhccC-----c-------eEEEE--
Q 016236 1 MAADAVVRNLDCQARKI----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITIF-- 57 (392)
Q Consensus 1 ~A~~~~l~~L~~~a~~v----~~~~~l~~Va~ts~~-----~~~~~~~li~~a~~~vg~~-----g-------~I~v~-- 57 (392)
+|++.++++|++++.++ .+++.|.+||+||++ +++.|++++++|+.+|+++ + .|+|+
T Consensus 133 ~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~ 212 (568)
T 3p9d_H 133 MARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKI 212 (568)
T ss_dssp HHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEE
T ss_pred HHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEc
Confidence 37899999999999877 567899999999985 3589999999999999874 3 57776
Q ss_pred cCCCccceeEEEeeEEEecccccccccccccccceeec---Cceeeecccc-------------cCCHHHHHH-------
Q 016236 58 DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLD---GALVLIYDTK-------------ISNSNVIRQ------- 114 (392)
Q Consensus 58 ~g~~~~~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~---~~~Il~~d~~-------------i~~~~~~~~------- 114 (392)
+|+++. ++++++||+|+++|. +| ..+++ ||+|++++++ |++++++.+
T Consensus 213 ~Ggs~~-dS~lv~G~v~dk~~~--~m-------~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~ 282 (568)
T 3p9d_H 213 MGGSLS-NSTVIKGMVFNREPE--GH-------VKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEK 282 (568)
T ss_dssp ESSCGG-GCEEESSCCBSSCBS--SG-------GGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHH
T ss_pred cCCCcc-hheeeccEEEeeccc--CC-------cEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHH
Confidence 488885 489999999999984 33 33677 9999999987 667776654
Q ss_pred ----HHHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCC
Q 016236 115 ----ASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTY 190 (392)
Q Consensus 115 ----~l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~ 190 (392)
+++++.++|+||||++++|++.++++|..+ +|++||+| ++.+|+|||++|||+++++ +++
T Consensus 283 ~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v-----~~~~leria~~tGa~ivs~-----l~~ 346 (568)
T 3p9d_H 283 QIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVP-----SKFELRRLCRVCGATPLPR-----LGA 346 (568)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCC-----CHHHHHHHHHHHSCCCCSS-----SSC
T ss_pred HHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecC-----CHHHHHHHHHHhCCEEEec-----ccc
Confidence 788899999999999999999999999976 48999999 6778999999999999998 899
Q ss_pred CCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHhHHHhH
Q 016236 191 FVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREK 267 (392)
Q Consensus 191 ~~~~~LG~~~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~~l~E~ 267 (392)
+++++||+|+.|+ +++++++||+||+. |++++|||+|||+|+++++|+
T Consensus 347 l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~ 397 (568)
T 3p9d_H 347 PTPEELGLVETVKTMEIGGDRVTVFKQEQG-----------------------------EISRTSTIILRGATQNNLDDI 397 (568)
T ss_dssp CCGGGCEECSCCCCCEETTEECBCCCCCSS-----------------------------SCCSSCEEEEEESCHHHHHHH
T ss_pred CCHHHCCcceEEEEEEecCceEEEEecCCC-----------------------------CCCCeEEEEECCCcHHHHHHH
Confidence 9999999999996 45689999999973 234699999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--c-CcccCCcHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HH
Q 016236 268 KLKITNALHAVQAAKE--E-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DK 342 (392)
Q Consensus 268 ~r~i~DAl~a~r~al~--~-gvVpGGGa~e~~~s~~L~~~~~~-~~~~q~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~ 342 (392)
||+++||||++|++++ + ++|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+
T Consensus 398 er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~ 477 (568)
T 3p9d_H 398 ERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPN 477 (568)
T ss_dssp HHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999 5 59999999999999999998765 899999999999999999999999999999999 99
Q ss_pred HHhc-----------CCCCeeEeCCCCc---cccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 016236 343 LLEQ-----------DSSDLGYNPARGN---YVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 392 (392)
Q Consensus 343 l~~~-----------~~~~~G~d~~~g~---~~dm~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 392 (392)
|++. +++++|||+.+|+ +.||++.|||||+.||+++|++|+++|++||||
T Consensus 478 l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (568)
T 3p9d_H 478 LYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSI 541 (568)
T ss_dssp HHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC---
T ss_pred HHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9874 3457899999997 999999999999999999999999999999987
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-54 Score=382.68 Aligned_cols=190 Identities=38% Similarity=0.563 Sum_probs=186.2
Q ss_pred eeEEEeeEEEecccccccccccccccceeecCceeeecccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhh
Q 016236 65 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATD 144 (392)
Q Consensus 65 ~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~~~~~l~~i~~~g~~lvi~~~~i~~~al~~L~~n 144 (392)
++++++||.||+||+||||+|++++|.++++||+||++|.||+++++++|+||.+.++|+||+|+|+|++++||++|+.|
T Consensus 1 elevvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvN 80 (194)
T 3m6c_A 1 ELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVN 80 (194)
T ss_dssp CCCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHH
T ss_pred CeEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhh
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHH
Q 016236 145 FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQER 224 (392)
Q Consensus 145 ~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r 224 (392)
+++|++++||||+|||||+||+.|+|||.+|||++++++.|+++++++.++||+|++|++++|+|++++|.+++++|++|
T Consensus 81 klrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~R 160 (194)
T 3m6c_A 81 AIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANR 160 (194)
T ss_dssp HHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHH
T ss_pred hccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccc----HHHHHHHhhhcCCeeEE
Q 016236 225 CEQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 254 (392)
Q Consensus 225 ~~~l~~~l~~~~s----~~l~~Rla~l~g~~~tI 254 (392)
|+||+++++.++| |||+||||||+||+|+|
T Consensus 161 v~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 161 AKHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 9999999999998 99999999999999975
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.6e-52 Score=371.79 Aligned_cols=185 Identities=35% Similarity=0.527 Sum_probs=181.5
Q ss_pred EeeEEEecccccccccccccccceeecCceeeecccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhccCC
Q 016236 69 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 148 (392)
Q Consensus 69 v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~~~~~l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~ 148 (392)
.+||.||+||+||||+|++++|.++++||+||++|.||+++++++|+||.+.++|+||||+|+|++++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 016236 149 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQL 228 (392)
Q Consensus 149 ~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l 228 (392)
+++|||||+|||||+||+.|+|||++|||++++++.|+++++++.++||+|++|++++|+|+++.|.+++++|++||+||
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccc----HHHHHHHhhhcCCeeE
Q 016236 229 RSTIKLSTS----DKLKDRLAKLSGGYAV 253 (392)
Q Consensus 229 ~~~l~~~~s----~~l~~Rla~l~g~~~t 253 (392)
+++++.++| |||+||||||+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999998 9999999999999984
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=3.5e-42 Score=291.78 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=142.2
Q ss_pred eEEEecccccccccccccccceeecCceeeecccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCc
Q 016236 71 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 150 (392)
Q Consensus 71 G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i~~~~~~~~~l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~ 150 (392)
||.||+||+||||+|++++|.++++||+||++|+||+++++++|+||++.++|+||+|+|++++++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEEEecceEEEEcC
Q 016236 151 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 214 (392)
Q Consensus 151 ~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g 214 (392)
+++|||+|||||+||+.|+|||.+|||++++++.|+++++++.++||+|++|++++|+|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999976
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.92 E-value=7.4e-25 Score=196.29 Aligned_cols=145 Identities=10% Similarity=0.168 Sum_probs=122.7
Q ss_pred ceeEEEeeEEEecccccccccccccccceeecCceeeecccccC-------------CHH-----------HHHHHHHHH
Q 016236 64 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPC 119 (392)
Q Consensus 64 ~~~~~v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~-----------~~~~~l~~i 119 (392)
++|++++|++|++++.+|.|++ .++||+|++++++++ +++ .+..++++|
T Consensus 2 ~dS~lv~Gvvl~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI 74 (178)
T 1gml_A 2 EDSCVLRGVMINKDVTHPRMRR-------YIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDI 74 (178)
T ss_dssp -CCSEEEEEEESCCCSSTTSCC-------EEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEEeccccCCCCCc-------ccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999999987742 689999999998653 222 356778889
Q ss_pred HhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCcee-
Q 016236 120 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS- 198 (392)
Q Consensus 120 ~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~- 198 (392)
+++|+++|+++++|+|.++++|..+ +|++||++ ++++|++||++|||+++++ ++++++++||+
T Consensus 75 ~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~ 138 (178)
T 1gml_A 75 IQLKPDVVITEKGISDLAQHYLMRA------NVTAIRRV-----RKTDNNRIARACGARIVSR-----PEELREDDVGTG 138 (178)
T ss_dssp HTTCCSEEEESSCBCHHHHHHHHHT------TCEEECCC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCC
T ss_pred hhcCCcEEEECCcccHHHHHHHHHC------CCEEEecC-----CHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCc
Confidence 9999999999999999999999976 48999999 7889999999999999998 89999999999
Q ss_pred eeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeeEEEEcCCcHh
Q 016236 199 CKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 262 (392)
Q Consensus 199 ~~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~vrG~t~~ 262 (392)
|+.|+ +++++++||+||++++ +|||+|||+|.+
T Consensus 139 ~~~v~~~~ig~~~~~~~~gc~~~~-------------------------------~~TIllRG~~~~ 174 (178)
T 1gml_A 139 AGLLEIKKIGDEYFTFITDCKDPK-------------------------------ACTILLRGASHH 174 (178)
T ss_dssp EEEEEEEEETTEEEEEEEEESSTT-------------------------------SCEEEEEC----
T ss_pred ccEEEEEEECCeEEEEEECCCCCC-------------------------------EEEEEEECCCcc
Confidence 99997 5788999999998764 889999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.86 E-value=4.4e-21 Score=168.56 Aligned_cols=127 Identities=17% Similarity=0.277 Sum_probs=110.3
Q ss_pred EeeEEEecccccccccccccccceeecCceeeecccccC-------------CHH-----------HHHHHHHHHHhcCC
Q 016236 69 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCMMQGQ 124 (392)
Q Consensus 69 v~G~~~d~g~~s~~~~~~~~~~~~~l~~~~Il~~d~~i~-------------~~~-----------~~~~~l~~i~~~g~ 124 (392)
++|++|++++.+|.|++ .++||+|++++++++ +++ .+...+++|+++|+
T Consensus 1 i~Gvv~~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSCS-------EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCCc-------CcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999999998743 689999999998654 332 24677888999999
Q ss_pred CEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCeEecCCCCCCcCCCCCCCceeeeEEE-
Q 016236 125 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 203 (392)
Q Consensus 125 ~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~i~s~~~~~~~~~~~~~~LG~~~~v~- 203 (392)
++||++++|+|.++++|..+ +|++||++ ++++|++||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEccC-----CHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999999975 48999999 7889999999999999998 8999999999999997
Q ss_pred --EecceEEEEcCCCCh
Q 016236 204 --ATMDNVVIIGGSGEL 218 (392)
Q Consensus 204 --i~~~~~~~~~g~~~~ 218 (392)
+++++++||+||++-
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578999999999864
No 32
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=30.31 E-value=66 Score=24.03 Aligned_cols=51 Identities=14% Similarity=0.103 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecCcchhhhh-hHHhhccCCCceEEEEecc
Q 016236 107 SNSNVIRQASLPCMMQGQSLLVVAEDVENEVLG-DIATDFTCTTEKVCIIKAA 158 (392)
Q Consensus 107 ~~~~~~~~~l~~i~~~g~~lvi~~~~i~~~al~-~L~~n~~~~~~~i~avr~~ 158 (392)
.+.+++..+++..+..|+|||++-.+-+..-.+ +--..+.+|. ..-++|..
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvnefqneakkegv-sydvlkst 86 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGV-SYDVLKST 86 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHTC-EEEEEECC
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHHHHHHHHHhcCc-chhhhccC
Confidence 467789999999999999999887766554433 3334444452 33344443
No 33
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=26.02 E-value=86 Score=23.04 Aligned_cols=27 Identities=15% Similarity=0.107 Sum_probs=18.6
Q ss_pred HHHHHhcCCCEEEEecCcchhhhhhHH
Q 016236 116 SLPCMMQGQSLLVVAEDVENEVLGDIA 142 (392)
Q Consensus 116 l~~i~~~g~~lvi~~~~i~~~al~~L~ 142 (392)
++.+.+-.+.|||++.|++++....+.
T Consensus 20 ~kai~~gkaklViiA~D~~~~~~~~i~ 46 (82)
T 3v7e_A 20 VKALKRGSVKEVVVAKDADPILTSSVV 46 (82)
T ss_dssp HHHHTTTCEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHcCCeeEEEEeCCCCHHHHHHHH
Confidence 344434446899999999997666543
No 34
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=23.85 E-value=56 Score=23.40 Aligned_cols=23 Identities=17% Similarity=0.456 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCccc
Q 016236 266 EKKLKITNALHAVQAAKEEGIVP 288 (392)
Q Consensus 266 E~~r~i~DAl~a~r~al~~gvVp 288 (392)
-.+.+++|++.+.-.|++.|.++
T Consensus 13 Aed~AieDaiy~L~~aL~~g~I~ 35 (65)
T 2f6m_A 13 AQDYALTDTIEALSRMLHRGTIP 35 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCC
Confidence 45789999999999999999763
No 35
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=23.41 E-value=76 Score=21.09 Aligned_cols=11 Identities=45% Similarity=0.685 Sum_probs=8.2
Q ss_pred HHHHHHHhhhc
Q 016236 238 DKLKDRLAKLS 248 (392)
Q Consensus 238 ~~l~~Rla~l~ 248 (392)
.+|+.||.+|-
T Consensus 33 ~KlKqRit~lE 43 (46)
T 3swy_A 33 MKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888887764
No 36
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=22.92 E-value=1.9e+02 Score=22.03 Aligned_cols=53 Identities=9% Similarity=0.040 Sum_probs=30.0
Q ss_pred HHHHHhcCCCEEEEecCcchhhhhhHHhhccCCCceEEEEeccCCccchhhHHHHHHHHhCCe
Q 016236 116 SLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQ 178 (392)
Q Consensus 116 l~~i~~~g~~lvi~~~~i~~~al~~L~~n~~~~~~~i~avr~~~~g~~rk~~ledla~~tGa~ 178 (392)
++.+.+-.+.|||++.|.++.....|...-.....+++-+ + . -++|..++|-.
T Consensus 28 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~--~-----s---~~eLG~A~Gk~ 80 (101)
T 3v7q_A 28 IKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV--E-----S---RAVLGRSIGKE 80 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE--S-----C---HHHHHHHTTSS
T ss_pred HHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee--c-----h---HHHHHhhhCcc
Confidence 3334344478999999999887766532111111333333 3 2 45678888853
No 37
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=20.57 E-value=2.2e+02 Score=20.18 Aligned_cols=32 Identities=9% Similarity=-0.186 Sum_probs=23.7
Q ss_pred cCCCCCCCceeeeEEE-EecceE-EEEcCCCChh
Q 016236 188 STYFVPLKLGSCKRVI-ATMDNV-VIIGGSGELV 219 (392)
Q Consensus 188 ~~~~~~~~LG~~~~v~-i~~~~~-~~~~g~~~~~ 219 (392)
..+++.-+.|+++.|. +++.+. ++|+|..+-+
T Consensus 10 V~np~~~Yy~y~G~VQRvsdgkaaVLFEGGnWDK 43 (66)
T 2jz2_A 10 VTNVDDTYYRFEGLVQRVSDGKAAVLFENGNWDK 43 (66)
T ss_dssp ECCTTSTTBTCEEEEEEEETTEEEEEEESSSCEE
T ss_pred EeCCCCcccceeEEEEEecCCcEEEEecCCCcee
Confidence 4566677889999995 777764 8888876654
No 38
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=20.56 E-value=86 Score=29.39 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=28.7
Q ss_pred HHhhhcCCeeEEEEcCCcHhHHHhHHHHHHHHHHHHHHHHHcC----cccCCcHH
Q 016236 243 RLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG----IVPGSGVA 293 (392)
Q Consensus 243 Rla~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~al~~g----vVpGGGa~ 293 (392)
-|.++.++..+|++||+.-.. +..+......+....+.| +|.|||..
T Consensus 43 yi~~~~~k~iVIKlGGs~l~~----~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~ 93 (321)
T 2v5h_A 43 YLQQFAGRTVVVKYGGAAMKQ----EELKEAVMRDIVFLACVGMRPVVVHGGGPE 93 (321)
T ss_dssp HHHHTTTCEEEEEECTHHHHS----HHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred HHHHhCCCeEEEEECchhhCC----chHHHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 345677889999999976321 223334444444444444 68999874
No 39
>1cf7_B Protein (transcription factor DP-2); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=20.55 E-value=1.4e+02 Score=23.01 Aligned_cols=22 Identities=14% Similarity=0.264 Sum_probs=16.5
Q ss_pred cHhHHHhHHHHHHHHHHHHHHH
Q 016236 260 GKAEVREKKLKITNALHAVQAA 281 (392)
Q Consensus 260 t~~~l~E~~r~i~DAl~a~r~a 281 (392)
+....+-.+||+.|++|+..+.
T Consensus 53 ~~~d~~~~rRRvYD~~NVl~a~ 74 (95)
T 1cf7_B 53 SAYDQKNIRRRVYDALNVLMAM 74 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccccchhhHHHHHHHHHHh
Confidence 3444444999999999998654
Done!