Query 016237
Match_columns 392
No_of_seqs 301 out of 3070
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 10:13:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uk7_A Class I glutamine amido 100.0 9E-71 3.1E-75 534.0 31.7 385 8-392 12-396 (396)
2 4hcj_A THIJ/PFPI domain protei 100.0 3.6E-39 1.2E-43 275.6 14.2 173 3-195 3-175 (177)
3 4hcj_A THIJ/PFPI domain protei 100.0 1.5E-37 5.1E-42 265.6 15.4 168 201-388 8-175 (177)
4 3l18_A Intracellular protease 100.0 1.4E-36 4.9E-41 259.2 13.1 166 8-193 2-167 (168)
5 3er6_A Putative transcriptiona 100.0 6.3E-36 2.2E-40 263.7 13.6 177 1-197 1-187 (209)
6 3gra_A Transcriptional regulat 100.0 8.1E-36 2.8E-40 261.6 11.4 169 7-197 4-179 (202)
7 2vrn_A Protease I, DR1199; cys 100.0 3.7E-35 1.3E-39 255.6 14.0 171 8-198 9-186 (190)
8 3ewn_A THIJ/PFPI family protei 100.0 5E-35 1.7E-39 264.2 14.5 168 9-197 24-193 (253)
9 3noq_A THIJ/PFPI family protei 100.0 3.4E-35 1.2E-39 262.6 13.0 167 9-197 6-173 (231)
10 4e08_A DJ-1 beta; flavodoxin-l 100.0 2.9E-35 9.8E-40 256.1 12.2 170 9-197 6-176 (190)
11 3l18_A Intracellular protease 100.0 1E-34 3.5E-39 247.7 14.5 167 201-387 2-168 (168)
12 4gdh_A DJ-1, uncharacterized p 100.0 6.8E-35 2.3E-39 253.9 12.0 172 8-197 4-182 (194)
13 3mgk_A Intracellular protease/ 100.0 8.5E-35 2.9E-39 256.7 12.8 169 8-197 4-176 (211)
14 1oi4_A Hypothetical protein YH 100.0 2.9E-34 1E-38 250.1 14.9 169 7-194 22-192 (193)
15 3fse_A Two-domain protein cont 100.0 3.5E-34 1.2E-38 269.7 16.2 172 7-197 9-181 (365)
16 4e08_A DJ-1 beta; flavodoxin-l 100.0 3.8E-34 1.3E-38 249.0 14.9 171 199-389 3-175 (190)
17 3er6_A Putative transcriptiona 100.0 8.7E-34 3E-38 250.0 17.3 170 199-389 6-186 (209)
18 2rk3_A Protein DJ-1; parkinson 100.0 2E-34 6.8E-39 252.3 12.7 171 8-197 3-176 (197)
19 3gra_A Transcriptional regulat 100.0 3.5E-34 1.2E-38 251.2 12.7 167 200-389 4-178 (202)
20 3efe_A THIJ/PFPI family protei 100.0 1.5E-33 5.3E-38 249.1 15.5 169 8-197 5-184 (212)
21 3noq_A THIJ/PFPI family protei 100.0 2.4E-33 8.2E-38 250.6 16.0 168 200-389 4-172 (231)
22 3mgk_A Intracellular protease/ 100.0 1.5E-33 5.1E-38 248.7 14.1 169 200-389 3-175 (211)
23 2vrn_A Protease I, DR1199; cys 100.0 1.9E-33 6.5E-38 244.7 14.3 170 200-389 8-184 (190)
24 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 7.2E-34 2.5E-38 250.5 11.0 169 8-197 9-181 (208)
25 1oi4_A Hypothetical protein YH 100.0 8.2E-33 2.8E-37 241.0 17.2 170 199-387 21-192 (193)
26 3efe_A THIJ/PFPI family protei 100.0 1E-32 3.6E-37 243.7 18.1 169 200-389 4-183 (212)
27 3ewn_A THIJ/PFPI family protei 100.0 5.1E-33 1.7E-37 251.1 16.4 169 200-389 22-192 (253)
28 3fse_A Two-domain protein cont 100.0 5.2E-33 1.8E-37 261.7 16.7 173 199-390 8-181 (365)
29 2rk3_A Protein DJ-1; parkinson 100.0 4.5E-33 1.5E-37 243.7 15.2 171 200-389 2-175 (197)
30 4gdh_A DJ-1, uncharacterized p 100.0 3.7E-33 1.3E-37 243.0 14.5 172 200-389 3-181 (194)
31 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 1.6E-33 5.4E-38 248.3 12.1 168 200-389 8-180 (208)
32 2fex_A Conserved hypothetical 100.0 3.8E-33 1.3E-37 242.3 13.0 169 8-197 1-173 (188)
33 1u9c_A APC35852; structural ge 100.0 2.8E-32 9.5E-37 243.6 16.3 180 9-196 6-223 (224)
34 2fex_A Conserved hypothetical 100.0 2.9E-32 1E-36 236.7 15.4 168 201-389 1-172 (188)
35 3kkl_A Probable chaperone prot 100.0 2.2E-32 7.5E-37 245.6 14.7 189 8-197 3-239 (244)
36 3f5d_A Protein YDEA; unknow pr 100.0 3.2E-32 1.1E-36 238.9 15.0 163 8-197 3-171 (206)
37 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 1.9E-32 6.3E-37 241.1 11.3 171 200-389 1-175 (205)
38 1rw7_A YDR533CP; alpha-beta sa 100.0 5.3E-32 1.8E-36 244.3 14.4 187 8-195 3-237 (243)
39 3f5d_A Protein YDEA; unknow pr 100.0 1.3E-31 4.6E-36 235.0 16.3 164 200-388 2-169 (206)
40 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 8.7E-33 3E-37 243.2 8.6 170 9-197 3-176 (205)
41 3bhn_A THIJ/PFPI domain protei 100.0 1.7E-32 5.8E-37 245.1 10.4 167 7-198 19-189 (236)
42 3uk7_A Class I glutamine amido 100.0 6.8E-32 2.3E-36 261.2 14.9 190 8-197 205-394 (396)
43 1u9c_A APC35852; structural ge 100.0 1.4E-31 4.8E-36 239.0 15.3 182 200-389 4-223 (224)
44 3n7t_A Macrophage binding prot 100.0 1.1E-31 3.9E-36 240.9 14.7 187 8-195 9-243 (247)
45 3cne_A Putative protease I; st 100.0 9.1E-32 3.1E-36 231.0 9.4 159 9-194 3-175 (175)
46 1n57_A Chaperone HSP31, protei 100.0 3.8E-31 1.3E-35 244.0 12.3 188 8-197 48-281 (291)
47 3bhn_A THIJ/PFPI domain protei 100.0 6.3E-31 2.1E-35 234.9 12.3 165 200-389 19-187 (236)
48 3n7t_A Macrophage binding prot 100.0 2.6E-30 8.9E-35 232.1 15.1 190 201-391 9-246 (247)
49 3kkl_A Probable chaperone prot 100.0 1.8E-30 6.3E-35 233.0 14.0 187 201-388 3-237 (244)
50 1rw7_A YDR533CP; alpha-beta sa 100.0 1.8E-30 6.2E-35 234.2 12.7 187 201-388 3-237 (243)
51 3cne_A Putative protease I; st 100.0 9.2E-31 3.2E-35 224.7 10.1 161 200-387 1-175 (175)
52 1n57_A Chaperone HSP31, protei 100.0 3.3E-30 1.1E-34 237.8 11.1 185 201-390 48-281 (291)
53 1vhq_A Enhancing lycopene bios 100.0 8.9E-30 3.1E-34 228.2 10.4 178 8-197 6-211 (232)
54 3l3b_A ES1 family protein; ssg 100.0 4.8E-29 1.7E-33 223.2 8.2 167 9-181 24-217 (242)
55 3l3b_A ES1 family protein; ssg 100.0 1.4E-28 4.9E-33 220.1 10.3 170 199-374 21-217 (242)
56 1vhq_A Enhancing lycopene bios 99.9 6.6E-28 2.3E-32 216.0 11.2 178 200-389 5-210 (232)
57 1sy7_A Catalase 1; heme oxidat 99.9 8.2E-22 2.8E-26 199.3 10.6 152 8-196 534-699 (715)
58 1sy7_A Catalase 1; heme oxidat 99.8 2.5E-20 8.4E-25 188.5 11.4 151 201-388 534-698 (715)
59 3ttv_A Catalase HPII; heme ori 99.8 9.6E-19 3.3E-23 175.0 11.1 113 7-136 599-711 (753)
60 3ttv_A Catalase HPII; heme ori 99.7 4.4E-17 1.5E-21 163.1 10.0 114 199-329 598-711 (753)
61 2iuf_A Catalase; oxidoreductas 99.6 1.4E-15 4.8E-20 151.9 11.2 131 7-195 528-677 (688)
62 3ej6_A Catalase-3; heme, hydro 99.6 7.1E-15 2.4E-19 146.4 10.8 105 7-136 536-649 (688)
63 2iuf_A Catalase; oxidoreductas 99.5 4.9E-14 1.7E-18 140.9 11.9 129 201-387 529-676 (688)
64 3ej6_A Catalase-3; heme, hydro 99.4 3.5E-13 1.2E-17 134.3 11.9 105 200-329 536-649 (688)
65 3d54_D Phosphoribosylformylgly 99.1 1.5E-10 5.1E-15 101.7 6.4 93 9-139 3-101 (213)
66 3d54_D Phosphoribosylformylgly 99.0 5E-10 1.7E-14 98.3 7.5 95 200-332 1-101 (213)
67 3m3p_A Glutamine amido transfe 98.4 6E-07 2E-11 80.2 8.7 94 8-133 3-98 (250)
68 2nv0_A Glutamine amidotransfer 98.4 3.3E-07 1.1E-11 79.0 6.3 85 9-133 2-88 (196)
69 1q7r_A Predicted amidotransfer 98.4 3.4E-07 1.2E-11 80.4 6.4 86 8-133 23-110 (219)
70 3l7n_A Putative uncharacterize 98.4 2E-06 6.8E-11 76.4 10.5 93 9-133 1-100 (236)
71 2iss_D Glutamine amidotransfer 98.3 6.9E-07 2.3E-11 77.8 6.1 86 8-133 20-107 (208)
72 3m3p_A Glutamine amido transfe 98.3 3.2E-06 1.1E-10 75.5 10.0 94 201-326 3-98 (250)
73 1ka9_H Imidazole glycerol phos 98.3 3.1E-06 1.1E-10 73.1 9.0 86 9-133 3-91 (200)
74 3ugj_A Phosphoribosylformylgly 98.2 2.7E-06 9.2E-11 91.7 9.5 100 8-139 1047-1159(1303)
75 3l7n_A Putative uncharacterize 98.2 7.5E-06 2.6E-10 72.6 10.6 93 202-326 1-100 (236)
76 2nv0_A Glutamine amidotransfer 98.1 3.1E-06 1.1E-10 72.9 6.4 86 201-326 1-88 (196)
77 2ywd_A Glutamine amidotransfer 98.1 2.8E-06 9.6E-11 72.8 6.0 85 9-133 3-90 (191)
78 1q7r_A Predicted amidotransfer 98.1 4.4E-06 1.5E-10 73.3 6.5 86 201-326 23-110 (219)
79 2abw_A PDX2 protein, glutamina 98.0 4.1E-06 1.4E-10 73.9 5.6 85 9-133 4-96 (227)
80 1wl8_A GMP synthase [glutamine 98.0 7.3E-06 2.5E-10 70.1 6.9 86 11-133 3-88 (189)
81 1ka9_H Imidazole glycerol phos 98.0 1.2E-05 4.1E-10 69.4 7.3 87 201-326 2-91 (200)
82 1wl8_A GMP synthase [glutamine 98.0 1.5E-05 5.2E-10 68.1 7.2 86 204-326 3-88 (189)
83 3ugj_A Phosphoribosylformylgly 97.9 1.8E-05 6E-10 85.5 9.0 100 201-332 1047-1159(1303)
84 2iss_D Glutamine amidotransfer 97.9 1.2E-05 4E-10 69.9 6.2 86 201-326 20-107 (208)
85 2ywd_A Glutamine amidotransfer 97.9 1.2E-05 4.2E-10 68.7 5.9 86 201-326 2-90 (191)
86 4gud_A Imidazole glycerol phos 97.9 6.8E-06 2.3E-10 71.6 3.4 86 9-133 3-88 (211)
87 2ywj_A Glutamine amidotransfer 97.8 2.7E-05 9.3E-10 66.3 6.9 82 9-133 1-84 (186)
88 1gpw_B Amidotransferase HISH; 97.8 3.7E-05 1.3E-09 66.3 7.8 85 9-134 1-94 (201)
89 1qdl_B Protein (anthranilate s 97.8 2.1E-05 7.3E-10 67.5 5.3 89 11-133 4-93 (195)
90 1qdl_B Protein (anthranilate s 97.7 5.1E-05 1.7E-09 65.1 6.3 78 218-326 15-93 (195)
91 1o1y_A Conserved hypothetical 97.6 0.00021 7.3E-09 63.3 8.7 93 204-326 13-109 (239)
92 1o1y_A Conserved hypothetical 97.5 0.00015 5E-09 64.3 7.3 93 9-133 13-109 (239)
93 1a9x_B Carbamoyl phosphate syn 97.5 0.00017 5.8E-09 68.0 8.0 87 9-133 191-277 (379)
94 2abw_A PDX2 protein, glutamina 97.5 8.1E-05 2.8E-09 65.5 5.3 49 278-326 43-96 (227)
95 4gud_A Imidazole glycerol phos 97.5 5.2E-05 1.8E-09 65.9 3.3 88 200-326 1-88 (211)
96 2ywj_A Glutamine amidotransfer 97.4 0.0002 6.8E-09 60.8 6.4 81 203-326 2-84 (186)
97 1gpw_B Amidotransferase HISH; 97.4 0.00025 8.4E-09 61.1 6.7 51 277-327 41-94 (201)
98 2vpi_A GMP synthase; guanine m 97.4 3.9E-05 1.3E-09 67.1 1.6 87 9-133 25-112 (218)
99 3l4e_A Uncharacterized peptida 97.4 8.8E-05 3E-09 64.1 3.7 97 8-132 27-128 (206)
100 2a9v_A GMP synthase; structura 97.4 0.00031 1.1E-08 61.0 7.2 87 8-133 13-101 (212)
101 1a9x_B Carbamoyl phosphate syn 97.3 0.00051 1.7E-08 64.7 8.2 87 202-326 191-277 (379)
102 1fy2_A Aspartyl dipeptidase; s 97.3 8.5E-05 2.9E-09 65.4 2.3 50 85-134 79-130 (229)
103 1jvn_A Glutamine, bifunctional 97.2 0.00037 1.3E-08 69.4 6.6 89 8-133 4-95 (555)
104 3fij_A LIN1909 protein; 11172J 97.2 0.00075 2.6E-08 60.3 7.3 78 26-133 32-124 (254)
105 2a9v_A GMP synthase; structura 97.1 0.0014 4.6E-08 56.9 8.5 87 201-326 13-101 (212)
106 1fy2_A Aspartyl dipeptidase; s 97.1 0.00024 8.1E-09 62.5 3.6 50 278-327 79-130 (229)
107 3l4e_A Uncharacterized peptida 97.1 0.00021 7.1E-09 61.7 2.4 98 201-326 27-129 (206)
108 3tqi_A GMP synthase [glutamine 97.0 0.00056 1.9E-08 67.8 5.5 89 8-133 10-98 (527)
109 2vpi_A GMP synthase; guanine m 97.0 0.00017 6E-09 62.9 1.6 89 201-326 24-112 (218)
110 2v4u_A CTP synthase 2; pyrimid 97.0 0.00071 2.4E-08 61.7 5.5 46 278-326 90-135 (289)
111 2v4u_A CTP synthase 2; pyrimid 96.8 0.0011 3.6E-08 60.5 5.0 46 85-133 90-135 (289)
112 3uow_A GMP synthetase; structu 96.8 0.0031 1.1E-07 62.8 8.5 92 8-133 7-99 (556)
113 1l9x_A Gamma-glutamyl hydrolas 96.7 0.0015 5.2E-08 60.2 5.4 96 9-133 31-140 (315)
114 3uow_A GMP synthetase; structu 96.7 0.0047 1.6E-07 61.5 9.1 91 202-326 8-99 (556)
115 3r75_A Anthranilate/para-amino 96.7 0.0059 2E-07 61.7 9.7 89 8-133 446-537 (645)
116 2w7t_A CTP synthetase, putativ 96.6 0.0024 8.2E-08 57.6 5.4 45 278-325 67-111 (273)
117 1jvn_A Glutamine, bifunctional 96.5 0.0032 1.1E-07 62.7 6.2 89 201-326 4-95 (555)
118 3fij_A LIN1909 protein; 11172J 96.4 0.0042 1.4E-07 55.4 6.3 79 218-326 31-124 (254)
119 2h2w_A Homoserine O-succinyltr 96.4 0.0069 2.4E-07 55.3 7.6 57 270-326 103-163 (312)
120 3r75_A Anthranilate/para-amino 96.3 0.017 5.8E-07 58.4 10.5 76 217-326 459-537 (645)
121 2vdj_A Homoserine O-succinyltr 96.3 0.0068 2.3E-07 55.2 6.6 57 270-326 91-151 (301)
122 2h2w_A Homoserine O-succinyltr 96.3 0.0069 2.4E-07 55.3 6.6 56 77-132 103-162 (312)
123 2w7t_A CTP synthetase, putativ 96.2 0.0042 1.4E-07 56.0 5.0 46 85-133 67-112 (273)
124 3tqi_A GMP synthase [glutamine 96.2 0.006 2E-07 60.4 6.5 88 202-326 11-98 (527)
125 1gpm_A GMP synthetase, XMP ami 96.2 0.0027 9.1E-08 62.9 3.9 89 8-133 7-95 (525)
126 1i1q_B Anthranilate synthase c 96.1 0.014 4.9E-07 49.5 7.5 80 217-326 13-92 (192)
127 2vdj_A Homoserine O-succinyltr 96.1 0.0064 2.2E-07 55.3 5.5 55 78-132 92-150 (301)
128 3nva_A CTP synthase; rossman f 95.9 0.01 3.5E-07 57.7 6.2 48 276-326 348-395 (535)
129 1i1q_B Anthranilate synthase c 95.6 0.028 9.6E-07 47.6 7.1 91 10-134 2-93 (192)
130 3en0_A Cyanophycinase; serine 95.5 0.021 7.3E-07 51.7 6.3 128 170-326 26-161 (291)
131 3nva_A CTP synthase; rossman f 95.5 0.015 5.3E-07 56.4 5.6 48 83-133 348-395 (535)
132 1l9x_A Gamma-glutamyl hydrolas 95.4 0.012 4E-07 54.2 4.4 79 219-326 56-140 (315)
133 1s1m_A CTP synthase; CTP synth 95.3 0.022 7.6E-07 56.0 6.4 48 276-326 341-388 (545)
134 1vco_A CTP synthetase; tetrame 95.3 0.021 7.1E-07 56.3 5.9 47 277-326 354-400 (550)
135 3en0_A Cyanophycinase; serine 95.1 0.017 5.7E-07 52.4 4.4 50 85-134 110-162 (291)
136 1gpm_A GMP synthetase, XMP ami 94.8 0.016 5.6E-07 57.2 3.8 88 202-326 8-95 (525)
137 1s1m_A CTP synthase; CTP synth 94.8 0.036 1.2E-06 54.6 6.0 47 84-133 342-388 (545)
138 1vco_A CTP synthetase; tetrame 94.7 0.032 1.1E-06 55.0 5.5 47 84-133 354-400 (550)
139 2ywb_A GMP synthase [glutamine 94.2 0.033 1.1E-06 54.7 4.4 75 25-133 13-87 (503)
140 2ywb_A GMP synthase [glutamine 94.1 0.041 1.4E-06 54.1 4.8 76 217-326 12-87 (503)
141 2vxo_A GMP synthase [glutamine 93.9 0.014 4.8E-07 59.5 1.1 89 8-133 29-117 (697)
142 2vxo_A GMP synthase [glutamine 93.4 0.029 1E-06 57.1 2.3 89 201-326 29-117 (697)
143 3rht_A (gatase1)-like protein; 92.6 0.41 1.4E-05 42.4 8.2 83 8-125 4-87 (259)
144 2zuv_A Lacto-N-biose phosphory 83.1 4.1 0.00014 40.7 8.6 87 8-125 438-544 (759)
145 4e5v_A Putative THUA-like prot 82.5 17 0.00057 32.4 12.0 91 8-128 4-97 (281)
146 3rht_A (gatase1)-like protein; 81.5 4.9 0.00017 35.4 7.9 83 200-317 3-86 (259)
147 2a5l_A Trp repressor binding p 74.7 3.6 0.00012 34.1 4.9 104 8-126 5-117 (200)
148 4e5v_A Putative THUA-like prot 68.2 64 0.0022 28.5 11.8 90 201-320 4-96 (281)
149 1u0t_A Inorganic polyphosphate 66.9 14 0.00047 33.3 7.3 109 8-137 4-114 (307)
150 1jg7_A BGT, DNA beta-glucosylt 66.5 6 0.00021 33.6 4.2 60 9-94 1-67 (351)
151 2r47_A Uncharacterized protein 66.4 5.9 0.0002 31.6 4.0 107 8-134 26-133 (157)
152 3soz_A ORF 245 protein, cytopl 66.0 5.8 0.0002 34.7 4.3 75 23-124 34-118 (248)
153 2zuv_A Lacto-N-biose phosphory 65.7 39 0.0013 33.9 10.3 94 193-318 430-544 (759)
154 2ark_A Flavodoxin; FMN, struct 63.6 9.4 0.00032 31.4 5.1 84 8-125 4-96 (188)
155 3tty_A Beta-GAL, beta-galactos 62.6 21 0.00072 36.1 8.3 61 23-124 426-486 (675)
156 3f6r_A Flavodoxin; FMN binding 58.3 22 0.00076 27.6 6.3 84 9-126 2-94 (148)
157 2an1_A Putative kinase; struct 56.6 7.7 0.00026 34.6 3.5 109 8-153 5-115 (292)
158 4hs4_A Chromate reductase; tri 56.3 8 0.00027 32.4 3.4 40 84-126 72-118 (199)
159 1z0s_A Probable inorganic poly 55.0 21 0.00071 31.7 6.0 79 8-138 29-107 (278)
160 2gk3_A Putative cytoplasmic pr 54.3 11 0.00037 33.0 4.0 75 23-124 41-125 (256)
161 2qv7_A Diacylglycerol kinase D 52.9 20 0.00068 32.6 5.8 93 8-133 24-123 (337)
162 2r47_A Uncharacterized protein 51.5 4.2 0.00014 32.5 0.8 50 277-327 83-133 (157)
163 1t0b_A THUA-like protein; treh 50.4 35 0.0012 29.6 6.7 70 27-126 37-106 (252)
164 3b6i_A Flavoprotein WRBA; flav 49.8 19 0.00064 29.5 4.7 102 9-127 2-115 (198)
165 1t0b_A THUA-like protein; treh 49.5 34 0.0012 29.7 6.5 71 220-320 37-107 (252)
166 2q9u_A A-type flavoprotein; fl 48.9 37 0.0013 31.6 7.1 90 8-127 256-351 (414)
167 1ydg_A Trp repressor binding p 48.7 16 0.00056 30.4 4.2 38 8-45 6-45 (211)
168 3l49_A ABC sugar (ribose) tran 47.3 18 0.00061 31.5 4.4 88 7-125 4-94 (291)
169 3tty_A Beta-GAL, beta-galactos 46.9 53 0.0018 33.1 8.2 61 216-317 426-486 (675)
170 2q9u_A A-type flavoprotein; fl 46.0 61 0.0021 30.0 8.2 63 278-353 307-374 (414)
171 3d3j_A Enhancer of mRNA-decapp 44.9 1.7E+02 0.0057 26.1 10.4 111 9-127 133-244 (306)
172 3hly_A Flavodoxin-like domain; 42.0 20 0.00068 28.6 3.5 86 10-127 2-92 (161)
173 1u0t_A Inorganic polyphosphate 41.2 54 0.0019 29.3 6.6 103 201-319 4-108 (307)
174 3s40_A Diacylglycerol kinase; 41.2 34 0.0012 30.5 5.3 91 8-132 8-105 (304)
175 3m9w_A D-xylose-binding peripl 40.4 21 0.00071 31.6 3.7 87 8-125 2-91 (313)
176 2zki_A 199AA long hypothetical 39.1 32 0.0011 28.1 4.5 37 8-45 4-42 (199)
177 5nul_A Flavodoxin; electron tr 38.9 34 0.0012 26.1 4.3 67 84-161 44-113 (138)
178 3fni_A Putative diflavin flavo 38.4 36 0.0012 27.1 4.5 37 8-44 4-42 (159)
179 2bon_A Lipid kinase; DAG kinas 35.5 25 0.00084 31.9 3.4 88 8-128 29-121 (332)
180 3d3k_A Enhancer of mRNA-decapp 35.2 2.2E+02 0.0075 24.6 9.6 111 9-127 86-197 (259)
181 3ff4_A Uncharacterized protein 35.1 1.4E+02 0.0049 22.4 7.3 39 8-46 4-42 (122)
182 1kwg_A Beta-galactosidase; TIM 35.1 59 0.002 32.5 6.4 62 23-127 426-487 (645)
183 2fz5_A Flavodoxin; alpha/beta 32.9 64 0.0022 24.2 5.1 40 84-125 45-88 (137)
184 3bio_A Oxidoreductase, GFO/IDH 31.2 1.9E+02 0.0064 25.5 8.6 30 84-121 64-93 (304)
185 3fvw_A Putative NAD(P)H-depend 30.9 73 0.0025 26.0 5.4 29 84-115 66-95 (192)
186 3uug_A Multiple sugar-binding 30.9 27 0.00094 31.0 2.9 87 8-125 3-92 (330)
187 3cs3_A Sugar-binding transcrip 30.4 2.2E+02 0.0074 24.1 8.8 38 7-44 7-47 (277)
188 3ktb_A Arsenical resistance op 30.3 64 0.0022 23.9 4.2 39 339-382 63-101 (106)
189 2q62_A ARSH; alpha/beta, flavo 29.3 39 0.0013 29.2 3.4 40 7-46 33-76 (247)
190 2hna_A Protein MIOC, flavodoxi 28.5 1.9E+02 0.0067 21.9 8.7 98 84-193 45-146 (147)
191 3lqk_A Dipicolinate synthase s 28.0 84 0.0029 26.2 5.2 43 4-46 3-46 (201)
192 1y80_A Predicted cobalamin bin 28.0 87 0.003 26.0 5.4 36 9-44 89-125 (210)
193 2qv7_A Diacylglycerol kinase D 27.5 72 0.0025 28.8 5.1 37 201-237 24-64 (337)
194 3jy6_A Transcriptional regulat 27.3 39 0.0013 29.1 3.2 85 7-125 6-93 (276)
195 1rtt_A Conserved hypothetical 27.2 92 0.0032 25.2 5.4 40 84-126 71-117 (193)
196 4ici_A Putative flavoprotein; 26.9 50 0.0017 26.6 3.5 42 83-126 85-126 (171)
197 3kgk_A Arsenical resistance op 26.9 74 0.0025 23.7 4.1 40 338-382 59-98 (110)
198 3lcm_A SMU.1420, putative oxid 26.5 1.6E+02 0.0054 24.0 6.7 50 84-141 72-122 (196)
199 1tvm_A PTS system, galactitol- 26.5 1.3E+02 0.0043 22.3 5.5 34 7-40 20-55 (113)
200 3klb_A Putative flavoprotein; 26.4 43 0.0015 26.6 3.0 41 83-125 76-116 (162)
201 1p3y_1 MRSD protein; flavoprot 26.4 60 0.0021 26.9 4.0 37 8-44 8-44 (194)
202 3nbm_A PTS system, lactose-spe 25.7 1.9E+02 0.0066 21.2 6.3 83 7-128 5-89 (108)
203 3tb6_A Arabinose metabolism tr 25.5 52 0.0018 28.4 3.7 90 8-125 15-107 (298)
204 1f4p_A Flavodoxin; electron tr 25.4 96 0.0033 23.7 4.9 44 84-127 46-94 (147)
205 2ohh_A Type A flavoprotein FPR 25.3 85 0.0029 28.8 5.3 42 84-127 306-353 (404)
206 3bbl_A Regulatory protein of L 25.2 1.1E+02 0.0036 26.4 5.7 37 8-44 4-47 (287)
207 3l6u_A ABC-type sugar transpor 24.8 30 0.001 30.0 2.0 88 7-125 7-97 (293)
208 3u7r_A NADPH-dependent FMN red 24.6 64 0.0022 26.6 3.8 36 9-44 3-41 (190)
209 1z0s_A Probable inorganic poly 24.6 92 0.0031 27.5 5.0 78 202-331 30-107 (278)
210 2iuy_A Avigt4, glycosyltransfe 24.4 57 0.002 28.9 3.8 39 8-46 3-58 (342)
211 2c92_A 6,7-dimethyl-8-ribityll 22.7 54 0.0019 26.3 2.8 89 8-122 17-114 (160)
212 2i2x_B MTAC, methyltransferase 22.6 69 0.0024 27.8 3.8 37 8-44 123-160 (258)
213 2yxb_A Coenzyme B12-dependent 22.6 51 0.0017 26.3 2.7 37 201-237 18-55 (161)
214 3mcu_A Dipicolinate synthase, 22.4 1.2E+02 0.0041 25.4 5.1 38 8-45 5-43 (207)
215 1y81_A Conserved hypothetical 22.3 2.6E+02 0.009 21.3 7.6 82 7-118 13-94 (138)
216 2i0f_A 6,7-dimethyl-8-ribityll 22.2 79 0.0027 25.2 3.7 93 9-122 13-115 (157)
217 2phj_A 5'-nucleotidase SURE; S 22.2 98 0.0033 26.8 4.6 37 9-46 2-38 (251)
218 1e2b_A Enzyme IIB-cellobiose; 22.0 1.2E+02 0.004 22.2 4.5 36 8-43 3-39 (106)
219 1e5d_A Rubredoxin\:oxygen oxid 21.8 1.9E+02 0.0065 26.3 7.0 41 84-126 302-345 (402)
220 3eag_A UDP-N-acetylmuramate:L- 21.7 2.9E+02 0.01 24.5 8.1 92 8-122 4-95 (326)
221 3s2y_A Chromate reductase; ura 27.2 20 0.00067 29.9 0.0 44 83-126 71-118 (199)
222 3zqu_A Probable aromatic acid 21.2 1.3E+02 0.0046 25.1 5.2 37 8-44 4-40 (209)
223 1y80_A Predicted cobalamin bin 20.9 1.6E+02 0.0054 24.3 5.7 79 201-310 88-167 (210)
224 3s40_A Diacylglycerol kinase; 20.7 1.5E+02 0.0051 26.2 5.8 37 200-236 7-47 (304)
225 3edo_A Flavoprotein, putative 20.6 71 0.0024 24.8 3.2 43 82-126 73-116 (151)
226 3brs_A Periplasmic binding pro 20.5 19 0.00067 31.2 -0.2 37 7-43 4-45 (289)
227 2i2x_B MTAC, methyltransferase 20.3 2.1E+02 0.0072 24.6 6.5 37 201-237 123-160 (258)
No 1
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=100.00 E-value=9e-71 Score=533.96 Aligned_cols=385 Identities=79% Similarity=1.346 Sum_probs=345.8
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
+|||+|+++|||+..|+..|+++|+++|++++++|++++|.++...+..+..+.+.+.++.|..+.++.+++++++.+||
T Consensus 12 ~~kv~ill~dg~e~~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 91 (396)
T 3uk7_A 12 SRTVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKYD 91 (396)
T ss_dssp CCEEEEECCTTEEHHHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGCS
T ss_pred CCeEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccCC
Confidence 57999999999999999999999999999999999987665443333333333345778889999999999999888999
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCccee
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAAC 167 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~~~ 167 (392)
+|+||||.++..+..++.+++||+++++++++|+++|+|+++|+++|||+||++|+||...+.|++.|+.|++.+.+..+
T Consensus 92 ~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~ 171 (396)
T 3uk7_A 92 GLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPDVC 171 (396)
T ss_dssp EEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSSTTCE
T ss_pred EEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhccccCCCEeecCcchHHHHHHCCCEEECCCCCcce
Confidence 99999998876678899999999999999999999999999999999999999999999999999988899887655558
Q ss_pred eecCceEecCCCCChHHHHHHHHHHhcCCcCCCCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCc
Q 016237 168 VVDGNIITGATYEGHPEFIRLFLKALGGTITGSDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTA 247 (392)
Q Consensus 168 v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~~~~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~ 247 (392)
|.|||+|||+|+.++.+|++++++.+.++...++++++++++++++..|+..++++|+++||+++++|+++++.+..+.+
T Consensus 172 v~Dg~iiT~~g~~~~~d~al~li~~l~g~~~~~~~ki~ill~dg~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~ 251 (396)
T 3uk7_A 172 VVDGSLITAATYEGHPEFIQLFVKALGGKITGANKRILFLCGDYMEDYEVKVPFQSLQALGCQVDAVCPEKKAGDRCPTA 251 (396)
T ss_dssp EEETTEEEESSGGGHHHHHHHHHHHTTCEEECCCCEEEEECCTTEEHHHHHHHHHHHHHHTCEEEEECTTCCTTCEECEE
T ss_pred EecCCEEEecCcccHHHHHHHHHHHHhccchhccceEEEEecCCCcchhHHHHHHHHHHCCCEEEEECCCCCCCcccccc
Confidence 99999999999999999999999999999888899999999999999999999999999999999999999875554444
Q ss_pred ccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcC
Q 016237 248 VHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAG 327 (392)
Q Consensus 248 ~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ag 327 (392)
+.++.+...++++.|..+.++..+++.+..+||+|+||||.+++.+..++.+.+||+++++++|+|+++|+|+++|+++|
T Consensus 252 ~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~aG 331 (396)
T 3uk7_A 252 IHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAAAG 331 (396)
T ss_dssp EEECCSSSSCEEEECCCEECCSCGGGCCGGGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHHTT
T ss_pred cccccccchhhhcCCceeeccCCHHHCCcccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHHcC
Confidence 44444555667788999999999999887899999999999877788899999999999999999999999999999999
Q ss_pred CCCCceeecCchhHHHHHHcCCeeeCCCCCceEEEcCCeEEccCCCChHHHHHHHHHHhcccccC
Q 016237 328 VLKGKKCTAYPAVKLNVLLAGASWLEPDPIDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQVLF 392 (392)
Q Consensus 328 lL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~~~~ 392 (392)
||+||++|+||...+.+++++++|++++++.++|.|||+|||+|+.++.||++++|++|.+++.|
T Consensus 332 lL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~~~~~d~~l~li~~l~~~~~~ 396 (396)
T 3uk7_A 332 VLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEFVSQLMALLGIQVSF 396 (396)
T ss_dssp TTTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSGGGHHHHHHHHHHHHTCEEEC
T ss_pred CcCCCEEecCccHHHHHHHCCCEEEcCCCceeEEEcCCEEECCCchhHHHHHHHHHHHhcccccC
Confidence 99999999999999999999999987643223899999999999999999999999999999887
No 2
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=100.00 E-value=3.6e-39 Score=275.58 Aligned_cols=173 Identities=19% Similarity=0.241 Sum_probs=160.3
Q ss_pred CCCCCCCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCC
Q 016237 3 NSKGGKRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEID 82 (392)
Q Consensus 3 ~m~~~~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (392)
+|.+.+++|+|++.+||++.|+..|+++|+++|++|+++|++++ .++++.|.++.+|..+++++
T Consensus 3 ~m~~t~~~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~----------------~v~~~~G~~v~~d~~l~~v~ 66 (177)
T 4hcj_A 3 AMGKTNNILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIG----------------TAQGKLGGMTNIDLLFSEVD 66 (177)
T ss_dssp --CCCCEEEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSE----------------EEEETTSCEEEECEEGGGCC
T ss_pred ccccCCCEEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCC----------------eEeeCCCCEEecCccHHHCC
Confidence 45543466778888999999999999999999999999999887 58899999999999999999
Q ss_pred CCCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCC
Q 016237 83 PSKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPE 162 (392)
Q Consensus 83 ~~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~ 162 (392)
+.+||+|+||||+++..+..++.+++||+++++++|+|++||+|+++|+++|||+||++|+||..++.+++.++.|.+.+
T Consensus 67 ~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~ 146 (177)
T 4hcj_A 67 AVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMANAKILEEINVTCLSADESHVRHGNANIMSEN 146 (177)
T ss_dssp GGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSS
T ss_pred HhHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCC
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999998766
Q ss_pred CcceeeecCceEecCCCCChHHHHHHHHHHhcC
Q 016237 163 TMAACVVDGNIITGATYEGHPEFIRLFLKALGG 195 (392)
Q Consensus 163 ~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~ 195 (392)
+|+|||+|||+|+.++.+|++++++.|..
T Consensus 147 ----vV~Dg~liTs~g~~~~~~~a~~lve~L~s 175 (177)
T 4hcj_A 147 ----VVVSGNIVTANGPTSSKDFANAVVGVLNS 175 (177)
T ss_dssp ----EEEETTEEEECSGGGHHHHHHHHHHHHHT
T ss_pred ----EEEECCEEECCCHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999998864
No 3
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=100.00 E-value=1.5e-37 Score=265.56 Aligned_cols=168 Identities=21% Similarity=0.242 Sum_probs=158.8
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
.++++|++.++|++.|+..|+++|+++||+|+++|+++++ ++++.|..+.+|..++++++.+||
T Consensus 8 ~~~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~~----------------v~~~~G~~v~~d~~l~~v~~~~yD 71 (177)
T 4hcj_A 8 NNILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIGT----------------AQGKLGGMTNIDLLFSEVDAVEFD 71 (177)
T ss_dssp CEEEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSEE----------------EEETTSCEEEECEEGGGCCGGGCS
T ss_pred CCEEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCCe----------------EeeCCCCEEecCccHHHCCHhHCC
Confidence 4567788899999999999999999999999999998775 788899999999999999999999
Q ss_pred EEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCCCceE
Q 016237 281 ALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDPIDRC 360 (392)
Q Consensus 281 ~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~v 360 (392)
+|+||||+++..+..++.+.+||+++++++|+|++||+|+++|+++|||+||++|+||..++++++++++|.+.. +
T Consensus 72 ~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~----v 147 (177)
T 4hcj_A 72 AVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMANAKILEEINVTCLSADESHVRHGNANIMSEN----V 147 (177)
T ss_dssp EEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSS----E
T ss_pred EEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCC----E
Confidence 999999999888999999999999999999999999999999999999999999999999999999999998765 8
Q ss_pred EEcCCeEEccCCCChHHHHHHHHHHhcc
Q 016237 361 FTDGNLVSGAAWPGHPEFISQLMALLGI 388 (392)
Q Consensus 361 v~dg~lvT~~g~~~~~~~~~~li~~l~~ 388 (392)
|.|||+|||+|+.++.+|++++++.|..
T Consensus 148 V~Dg~liTs~g~~~~~~~a~~lve~L~s 175 (177)
T 4hcj_A 148 VVSGNIVTANGPTSSKDFANAVVGVLNS 175 (177)
T ss_dssp EEETTEEEECSGGGHHHHHHHHHHHHHT
T ss_pred EEECCEEECCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999864
No 4
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=1.4e-36 Score=259.19 Aligned_cols=166 Identities=36% Similarity=0.621 Sum_probs=154.8
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
+|||+|+++|||+..|+..|+++|+++||+++++|++++ ++.++.|.++.++.+++++++.+||
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~----------------~v~~~~g~~i~~~~~~~~~~~~~~D 65 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRG----------------KITGKHGYSVNVDLTFEEVDPDEFD 65 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSE----------------EEECTTSCEEEECEEGGGCCGGGCS
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCC----------------EEecCCCcEEeccCChhHCCHhhCC
Confidence 579999999999999999999999999999999999876 5888999999999999998877899
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCccee
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAAC 167 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~~~ 167 (392)
+|+||||.++..+..++.+.+||+++++++++|+++|+|+++|+++|+|+||++|+||...+.|++.+..+++.. +
T Consensus 66 ~livpGG~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~----~ 141 (168)
T 3l18_A 66 ALVLPGGKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILISAKVLKGRRGTSTITIRDDVINAGAEWIDAE----V 141 (168)
T ss_dssp EEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSS----C
T ss_pred EEEECCCcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHHCCccCCCEEEeCccHHHHHHhCCCEEecCC----E
Confidence 999999987766778999999999999999999999999999999999999999999999999999777775433 8
Q ss_pred eecCceEecCCCCChHHHHHHHHHHh
Q 016237 168 VVDGNIITGATYEGHPEFIRLFLKAL 193 (392)
Q Consensus 168 v~dg~iiT~~g~~s~~~~~~~~i~~l 193 (392)
|.|||+|||+|+.++.+|++++++.|
T Consensus 142 v~dg~iiT~~g~~~~~d~~l~li~~l 167 (168)
T 3l18_A 142 VVDGNWVSSRHPGDLYAWMREFVKLL 167 (168)
T ss_dssp EEETTEEEECSGGGHHHHHHHHGGGC
T ss_pred EEeCCEEEcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999876
No 5
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=6.3e-36 Score=263.70 Aligned_cols=177 Identities=15% Similarity=0.161 Sum_probs=155.3
Q ss_pred CCCCCCCCCEEEEEecCCCCccchHHHHHHHHhCC-------CeEEEECCCCCCCCCCCccccCCCCcccccccccCccc
Q 016237 1 MANSKGGKRSVLLLCGDYMEDYEAMVPFQALLAFG-------VSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFA 73 (392)
Q Consensus 1 m~~m~~~~~kI~ill~~g~~~~e~~~~~~~l~~ag-------~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 73 (392)
|+.|+++++||+|+++|||+..|+..|+++|+.+| |+++++|++++ ++.++.|+++.
T Consensus 1 m~~~~~~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~----------------~v~~~~G~~v~ 64 (209)
T 3er6_A 1 MSLTNKKNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNR----------------PLIGRGGISVQ 64 (209)
T ss_dssp ------CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSS----------------CEEETTTEEEE
T ss_pred CCCCCCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCC----------------ceecCCCeEEe
Confidence 66677678999999999999999999999999875 99999999876 58889999999
Q ss_pred cCcCcCCCCCCCccEEEEcCCCCccc--ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHH
Q 016237 74 LNATFDEIDPSKYDGLVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVL 151 (392)
Q Consensus 74 ~~~~~~~~~~~~~D~iiipGG~~~~~--~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l 151 (392)
+|..+++++ +||+||||||.++.. +..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|
T Consensus 65 ~d~~~~~~~--~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l 142 (209)
T 3er6_A 65 PTAQWQSFD--FTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKAGLLQQNKAVMHSYFAHLF 142 (209)
T ss_dssp CSSCGGGCS--CCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHTCCSSCEECCCHHHHHHH
T ss_pred CCcCccccC--CCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHcCCCCCCeeEECHHHHHHH
Confidence 999999864 899999999987644 3679999999999999999999999999999999999999999999999999
Q ss_pred HH-CCCeEEcCCCcceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 152 IA-AGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 152 ~~-~~~~~~~~~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
++ +|...+..+. .+|+|||+|||+|+.+++||++++++++.++.
T Consensus 143 ~~~~p~~~~~~~~--~~v~Dg~iiTs~G~~a~~dlal~li~~~~G~~ 187 (209)
T 3er6_A 143 GELFPEIMLMTEQ--KALIDGNVYLSSGPYSHSSVMLEIVEEYFGKH 187 (209)
T ss_dssp HHHCTTSEECTTC--SEEEETTEEEECCSSCCHHHHHHHHHHHHCHH
T ss_pred HHHCCCcEEecCC--EEEEeCCEEECCcHHHHHHHHHHHHHHHhCHH
Confidence 87 7776554432 38999999999999999999999999988875
No 6
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=8.1e-36 Score=261.58 Aligned_cols=169 Identities=15% Similarity=0.206 Sum_probs=154.3
Q ss_pred CCCEEEEEecCCCCccchHHHHHHHHhCC------CeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCC
Q 016237 7 GKRSVLLLCGDYMEDYEAMVPFQALLAFG------VSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDE 80 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~e~~~~~~~l~~ag------~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (392)
.++||+|+++|||+..|+..|+++|+.+| |+++++|++++ ++.++.|+++.++ ++++
T Consensus 4 ~~~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~----------------~v~~~~G~~i~~d-~l~~ 66 (202)
T 3gra_A 4 APYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGD----------------RVLSDLGLELVAT-ELSA 66 (202)
T ss_dssp -CEEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSS----------------EEEBTTSCEEECE-ECCS
T ss_pred CcEEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC----------------ceEcCCCCEEECC-Cccc
Confidence 36899999999999999999999999987 99999999876 6889999999999 9998
Q ss_pred CCCCCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHH-CCCeEE
Q 016237 81 IDPSKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGASWI 159 (392)
Q Consensus 81 ~~~~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~-~~~~~~ 159 (392)
++..+||+||||||.+.... . +.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++ +|...+
T Consensus 67 ~~~~~~D~livpGG~~~~~~-~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~ 144 (202)
T 3gra_A 67 AALKELDLLVVCGGLRTPLK-Y-PELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRI 144 (202)
T ss_dssp GGGTTCSEEEEECCTTCCSC-C-TTHHHHHHHHHHHTCEEEEETTHHHHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEE
T ss_pred ccCCCCCEEEEeCCCchhhc-c-HHHHHHHHHHHhhCCEEEEECHHHHHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEe
Confidence 76779999999999876543 4 89999999999999999999999999999999999999999999999987 777766
Q ss_pred cCCCcceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 160 EPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 160 ~~~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
..+. +|.|||+|||+|+.+++||++++++++.++.
T Consensus 145 ~~~~---~v~dg~iiTs~G~~a~~dlal~li~~~~G~~ 179 (202)
T 3gra_A 145 TPAS---FTLDRDRLSAASPNGAMELMLGLVRRLYGDG 179 (202)
T ss_dssp CSSS---EEEETTEEEESSHHHHHHHHHHHHHHHHCHH
T ss_pred cCCe---EEEeCCEEECCCHHHHHHHHHHHHHHHhCHH
Confidence 5554 9999999999999999999999999988875
No 7
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=3.7e-35 Score=255.58 Aligned_cols=171 Identities=27% Similarity=0.552 Sum_probs=154.3
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccc-----cccCccccCcCcCCCC
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSE-----TRGHNFALNATFDEID 82 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~ 82 (392)
++||+|+++|||+..|+..|+++|+++||++++++++++ ++.+ +.|.++.++.++++++
T Consensus 9 ~~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~----------------~v~~~~~~~~~g~~v~~~~~~~~~~ 72 (190)
T 2vrn_A 9 GKKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPG----------------EIQSMKGDIEPQEKYRVDHVVSEVQ 72 (190)
T ss_dssp TCEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSS----------------EEEEEETTTEEEEEEECSEEGGGCC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCC----------------ccccccccccCCcEEeCCCChhhCC
Confidence 689999999999999999999999999999999999876 3444 6788999999999987
Q ss_pred CCCccEEEEcCCC-CcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcC
Q 016237 83 PSKYDGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEP 161 (392)
Q Consensus 83 ~~~~D~iiipGG~-~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~ 161 (392)
+.+||+||||||. ++..+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++.+..+++.
T Consensus 73 ~~~~D~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~ 152 (190)
T 2vrn_A 73 VSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSETGIAQGLKMTSWSSLKRELTLAGAQWVDE 152 (190)
T ss_dssp GGGCSEEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCC
T ss_pred hhhCCEEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHhCcccCCcEEecCccHHHHHHHcCCeEECC
Confidence 7799999999997 555567899999999999999999999999999999999999999999999999999977777766
Q ss_pred CCcceeeecCceEecCCCCChHHHHHHHHHHh-cCCcC
Q 016237 162 ETMAACVVDGNIITGATYEGHPEFIRLFLKAL-GGTIT 198 (392)
Q Consensus 162 ~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l-~~~~~ 198 (392)
. +++|||+|||+|+.++.+|++++++.+ .++..
T Consensus 153 ~----~v~Dg~iiTs~g~~s~~~~~l~li~~l~~g~~~ 186 (190)
T 2vrn_A 153 E----CVTDKGVVTSRKPDDLPAFNKKIVEEFAEGDHS 186 (190)
T ss_dssp S----CEEETTEEECSSGGGHHHHHHHHHHHHHHCCCG
T ss_pred C----EEEcCCEEEcCChhhHHHHHHHHHHHHhccccc
Confidence 5 566999999999999999999999998 66653
No 8
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=5e-35 Score=264.20 Aligned_cols=168 Identities=24% Similarity=0.274 Sum_probs=156.2
Q ss_pred CEEEEEecCCCCccchHHHHHHH-HhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQAL-LAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l-~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
+||+|+++|||+..|+.+|+++| +.+||+|+++|++++ ++.++.|+++.++..+++++. .||
T Consensus 24 ~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~----------------~V~~~~G~~i~~d~~l~~~~~-~yD 86 (253)
T 3ewn_A 24 EQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLD----------------PVTSDAGLAIVPTATFGTCPR-DLT 86 (253)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSS----------------CEECTTSCEECCSEETTTSCS-SCS
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCC----------------eEEcCCCCEEeCCcCHHHcCC-CCC
Confidence 79999999999999999999999 578999999999976 588889999999999998863 799
Q ss_pred EEEEcCCC-CcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCcce
Q 016237 88 GLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAA 166 (392)
Q Consensus 88 ~iiipGG~-~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~~ 166 (392)
+||||||. ++..+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|+++|..+++..
T Consensus 87 ~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~---- 162 (253)
T 3ewn_A 87 VLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILGAAGLLKGYKATSHWSCRDALAGFGAIPTEAR---- 162 (253)
T ss_dssp EEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSS----
T ss_pred EEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCc----
Confidence 99999998 7766788999999999999999999999999999999999999999999999999988998886543
Q ss_pred eeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 167 CVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 167 ~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+|.|||+|||+|+.+++||++++++++.++.
T Consensus 163 vV~Dg~iiTs~G~~a~idlaL~lv~~l~G~~ 193 (253)
T 3ewn_A 163 VVRDRNRITGAGVTAGLDFGLSMVAELRDQT 193 (253)
T ss_dssp EEEETTEEEECSTTHHHHHHHHHHHHHSCHH
T ss_pred EEEECCEEECCCHHHHHHHHHHHHHHHcCHH
Confidence 8999999999999999999999999998876
No 9
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=3.4e-35 Score=262.59 Aligned_cols=167 Identities=20% Similarity=0.286 Sum_probs=155.9
Q ss_pred CEEEEEecCCCCccchHHHHHHHHh-CCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~-ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
+||+|+++|||+..|+.+|+++|+. ++|+++++|++++ ++.++.|+++.++.++++++ +||
T Consensus 6 ~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~----------------~V~~~~G~~v~~d~~l~~~~--~~D 67 (231)
T 3noq_A 6 VQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPG----------------PVVASSGLVLQATTSFADCP--PLD 67 (231)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSE----------------EEECTTSCEEEECEETTTCC--CCS
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCC----------------cEEcCCCCEEecccChhHCC--cCC
Confidence 7999999999999999999999999 8999999999876 58889999999999999874 799
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCccee
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAAC 167 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~~~ 167 (392)
+||||||.++..+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|+++|..+++.. +
T Consensus 68 ~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~----v 143 (231)
T 3noq_A 68 VICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHER----V 143 (231)
T ss_dssp EEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSS----E
T ss_pred EEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCc----E
Confidence 999999988766788999999999999999999999999999999999999999999999999988998886443 8
Q ss_pred eecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 168 VVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 168 v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
|.|||+|||+|+.+++||++++++++.++.
T Consensus 144 V~Dg~iiTs~G~~a~~d~aL~li~~~~G~~ 173 (231)
T 3noq_A 144 VRDGNLLTGGGITAGIDFALTLAAELFDAA 173 (231)
T ss_dssp EEETTEEEECSTTHHHHHHHHHHHHHSCHH
T ss_pred EEeCCEEECCCHHHHHHHHHHHHHHHcCHH
Confidence 999999999999999999999999998876
No 10
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=2.9e-35 Score=256.13 Aligned_cols=170 Identities=26% Similarity=0.418 Sum_probs=153.6
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
|||+|+++|||+..|+..|+++|+++|++++++|++++. ++.++.|.++.++..++++++.+||+
T Consensus 6 kkv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~---------------~v~~~~g~~i~~d~~l~~~~~~~~D~ 70 (190)
T 4e08_A 6 KSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGE---------------AVKCSRDVQILPDTSLAQVASDKFDV 70 (190)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSS---------------CEECTTSCEEECSEETGGGTTCCCSE
T ss_pred cEEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCc---------------ceecCCCcEEECCCCHHHCCcccCCE
Confidence 799999999999999999999999999999999998721 58889999999999999988778999
Q ss_pred EEEcCCC-CcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCccee
Q 016237 89 LVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAAC 167 (392)
Q Consensus 89 iiipGG~-~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~~~ 167 (392)
|+||||. +...+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++ +..+++.+ .+
T Consensus 71 livpGG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~-~~~~~~~~---~~ 146 (190)
T 4e08_A 71 VVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAKHGVASGKSLTSYPSMKPQLVN-NYSYVDDK---TV 146 (190)
T ss_dssp EEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGGGGSSS-SSEECSSC---SE
T ss_pred EEECCCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCeEEeCcCHHHHHhc-CCcccCCC---cE
Confidence 9999996 4445678999999999999999999999999999999999999999999999888876 33455433 38
Q ss_pred eecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 168 VVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 168 v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
|.|||+|||+|+.+++||++++++++.++.
T Consensus 147 v~dg~iiTs~g~~a~~d~al~li~~~~g~~ 176 (190)
T 4e08_A 147 VKDGNLITSRGPGTAYEFALKIAEELAGKE 176 (190)
T ss_dssp EEETTEEEECSGGGHHHHHHHHHHHHHCHH
T ss_pred EEECCEEECCChHHHHHHHHHHHHHhcCHH
Confidence 999999999999999999999999998865
No 11
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=1e-34 Score=247.70 Aligned_cols=167 Identities=35% Similarity=0.599 Sum_probs=155.3
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
.+++.++++++++..|+..++++|+++||+++++|+++++ +.++.|..+.++..+++++..+||
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~----------------v~~~~g~~i~~~~~~~~~~~~~~D 65 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRGK----------------ITGKHGYSVNVDLTFEEVDPDEFD 65 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSEE----------------EECTTSCEEEECEEGGGCCGGGCS
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCCE----------------EecCCCcEEeccCChhHCCHhhCC
Confidence 4689999999999999999999999999999999998764 778889999999999998777899
Q ss_pred EEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCCCceE
Q 016237 281 ALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDPIDRC 360 (392)
Q Consensus 281 ~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~v 360 (392)
+|+||||.++..+..++.+.+||+++++++|+|+++|+|+++|+++|||+||++||||...+.++..+.++.+. .+
T Consensus 66 ~livpGG~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~----~~ 141 (168)
T 3l18_A 66 ALVLPGGKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILISAKVLKGRRGTSTITIRDDVINAGAEWIDA----EV 141 (168)
T ss_dssp EEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCS----SC
T ss_pred EEEECCCcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHHCCccCCCEEEeCccHHHHHHhCCCEEecC----CE
Confidence 99999999876778899999999999999999999999999999999999999999999999999888888654 48
Q ss_pred EEcCCeEEccCCCChHHHHHHHHHHhc
Q 016237 361 FTDGNLVSGAAWPGHPEFISQLMALLG 387 (392)
Q Consensus 361 v~dg~lvT~~g~~~~~~~~~~li~~l~ 387 (392)
|.|||+|||+|+.++.+|+++++++|.
T Consensus 142 v~dg~iiT~~g~~~~~d~~l~li~~l~ 168 (168)
T 3l18_A 142 VVDGNWVSSRHPGDLYAWMREFVKLLH 168 (168)
T ss_dssp EEETTEEEECSGGGHHHHHHHHGGGCC
T ss_pred EEeCCEEEcCCHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999873
No 12
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=6.8e-35 Score=253.94 Aligned_cols=172 Identities=22% Similarity=0.345 Sum_probs=152.5
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCC----
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP---- 83 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---- 83 (392)
|+||+|+++|||+..|+..|+++|+++|++++++++..++. ..+.++.|.++.+|..+++++.
T Consensus 4 M~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~-------------~~v~~~~g~~v~~d~~~~~~~~~d~~ 70 (194)
T 4gdh_A 4 MVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKD-------------RLVKMSRDVEMYANRSYKEIPSADDF 70 (194)
T ss_dssp -CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCTT-------------CEEECTTSCEEECSEEGGGSCCHHHH
T ss_pred CCEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCC-------------ceEecCCCceeeccccHhhCCccccc
Confidence 46999999999999999999999999999999998764321 1578889999999999988764
Q ss_pred -CCccEEEEcCCC-CcccccCCHHHHHHHHHHHhC-CCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEc
Q 016237 84 -SKYDGLVIPGGR-APEYLAMNDSVIDLVRKFSNS-GKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIE 160 (392)
Q Consensus 84 -~~~D~iiipGG~-~~~~~~~~~~l~~~l~~~~~~-~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~ 160 (392)
++||+|+||||. ++..+..++.+++||++++++ +|+++++|+|+ +|+.+|+|+||++|+||..++.|++.+..|++
T Consensus 71 ~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~-~l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d 149 (194)
T 4gdh_A 71 AKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGT-LTAKTSGLPNKQITGHPSVRGQLEEGGYKYLD 149 (194)
T ss_dssp HHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGG-HHHHHTTCCCSEECCCGGGHHHHHHTTCEECC
T ss_pred cccCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccc-cchhhceecCCceEecCcHHHHHHhcCCeeec
Confidence 369999999996 466688999999999999875 79999999998 46678889999999999999999999999987
Q ss_pred CCCcceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 161 PETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 161 ~~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
.. +|+|||+|||+|+.+++||++++++.+.+++
T Consensus 150 ~~----vV~Dg~iiTs~g~~~~~d~al~lve~l~G~~ 182 (194)
T 4gdh_A 150 QP----VVLEENLITSQGPGTAMLFGLKLLEQVASKD 182 (194)
T ss_dssp SS----EEEETTEEEECSGGGHHHHHHHHHHHHSCHH
T ss_pred ce----EEEcCCEEECCCHhHHHHHHHHHHHHHcCHH
Confidence 65 8999999999999999999999999999876
No 13
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=8.5e-35 Score=256.71 Aligned_cols=169 Identities=16% Similarity=0.223 Sum_probs=154.5
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhC--CCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCC
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAF--GVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSK 85 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~a--g~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 85 (392)
++||+|+++|||+..|+..|+++|+.+ +|+++++|++++ ++.++.|+++.+|..+++.+ .
T Consensus 4 ~~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~----------------~V~~~~G~~v~~d~~~~~~~--~ 65 (211)
T 3mgk_A 4 SYRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGG----------------LVESSQKVRVETSLYTRDEN--I 65 (211)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCE----------------EEECTTCCEEEEBCCCCCSS--S
T ss_pred ceEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCC----------------eEecCCCcEEEeccchhhCC--C
Confidence 579999999999999999999999998 599999999876 58889999999999998865 6
Q ss_pred ccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHH-CCCeEE-cCCC
Q 016237 86 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGASWI-EPET 163 (392)
Q Consensus 86 ~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~-~~~~~~-~~~~ 163 (392)
||+|+||||.++..+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++ ++...+ ....
T Consensus 66 ~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~~ 145 (211)
T 3mgk_A 66 EKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEAR 145 (211)
T ss_dssp EEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSCS
T ss_pred CCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCCe
Confidence 99999999987766778999999999999999999999999999999999999999999999999998 565544 3443
Q ss_pred cceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 164 MAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 164 ~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+|.|||+|||+|+.+++||++++++++.++.
T Consensus 146 ---~v~Dg~iiTs~G~~a~~dlal~lv~~~~G~~ 176 (211)
T 3mgk_A 146 ---WVKDGNIYTSSGVSAGIDMTLGFIEDLIGKE 176 (211)
T ss_dssp ---EEEETTEEEECSHHHHHHHHHHHHHHHHCHH
T ss_pred ---EEEeCCEEECCCHHHHHHHHHHHHHHHhCHH
Confidence 9999999999999999999999999998876
No 14
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=2.9e-34 Score=250.15 Aligned_cols=169 Identities=33% Similarity=0.575 Sum_probs=155.0
Q ss_pred CCCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccC-ccccCcCcCCCCCCC
Q 016237 7 GKRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGH-NFALNATFDEIDPSK 85 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~ 85 (392)
.++||+|+++|||+..|+..|+++|+++|++++++++++++ .+.++.|. ++.++..++++++.+
T Consensus 22 ~~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~---------------~v~~~~g~~~v~~~~~l~~~~~~~ 86 (193)
T 1oi4_A 22 LSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGK---------------TVKGKKGEASVTIDKSIDEVTPAE 86 (193)
T ss_dssp CCCEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTTC---------------EEECTTSSCEEECCEEGGGCCGGG
T ss_pred cCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCc---------------ceecCCCCeEEECCCChHHCCccc
Confidence 35799999999999999999999999999999999998762 27788898 999999999887779
Q ss_pred ccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCcc
Q 016237 86 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMA 165 (392)
Q Consensus 86 ~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~ 165 (392)
||+||||||.++..+..++.+.+||+++++++++|++||+|+++|+++|+|+||++|+||...+.|++.+..+.+..
T Consensus 87 ~D~livpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~--- 163 (193)
T 1oi4_A 87 FDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQE--- 163 (193)
T ss_dssp CSEEEECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSS---
T ss_pred CCEEEECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCC---
Confidence 99999999987666677899999999999999999999999999999999999999999999999998877777654
Q ss_pred eeeecCc-eEecCCCCChHHHHHHHHHHhc
Q 016237 166 ACVVDGN-IITGATYEGHPEFIRLFLKALG 194 (392)
Q Consensus 166 ~~v~dg~-iiT~~g~~s~~~~~~~~i~~l~ 194 (392)
+|+||| +|||+|+.++.||++++++.+.
T Consensus 164 -~v~Dg~~iiTs~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 164 -VVVDKDQLVTSRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp -CEEETTTEEEESSGGGHHHHHHHHHHHHC
T ss_pred -EEEECCEEEECCCcchHHHHHHHHHHHhh
Confidence 688999 9999999999999999999875
No 15
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=3.5e-34 Score=269.70 Aligned_cols=172 Identities=30% Similarity=0.507 Sum_probs=158.8
Q ss_pred CCCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccC-ccccCcCcCCCCCCC
Q 016237 7 GKRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGH-NFALNATFDEIDPSK 85 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~ 85 (392)
.++||+|+++|||+..|+..|+++|+.+||+++++|+++++ .+.++.|+ ++.++..++++++.+
T Consensus 9 ~mkkV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g~---------------~V~ss~G~~~i~~d~~l~~v~~~~ 73 (365)
T 3fse_A 9 GKKKVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMNE---------------KYKGKRGRLSTQADGTTTEAIASE 73 (365)
T ss_dssp --CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSSC---------------CEECTTSCCEECCSEETTTCCGGG
T ss_pred CceEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCCc---------------eeecCCCceEEeCCCCHhhCCCcC
Confidence 46899999999999999999999999999999999999863 38888999 999999999988778
Q ss_pred ccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCcc
Q 016237 86 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMA 165 (392)
Q Consensus 86 ~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~ 165 (392)
||+||||||.++..+..++.+.+||+++++++++|++||+|+++|+++|||+||++|+||...+.|++.+..+.+..
T Consensus 74 ~DaLiVPGG~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~--- 150 (365)
T 3fse_A 74 FDAVVIPGGMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIEGDLLRGKQATGFIAISKDMMNAGADYLDEA--- 150 (365)
T ss_dssp CSEEEECCBTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSS---
T ss_pred CCEEEEECCcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCc---
Confidence 99999999998766788999999999999999999999999999999999999999999999999999777776543
Q ss_pred eeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 166 ACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 166 ~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+|+|||+|||+|+.++.+|++++++.+.+..
T Consensus 151 -vV~DGniITs~G~~a~~d~al~lIe~L~g~~ 181 (365)
T 3fse_A 151 -LVVDGNLITSREPGDLAIFTTAILSRLGYGG 181 (365)
T ss_dssp -CEEETTEEEECSGGGHHHHHHHHHHHTTCCC
T ss_pred -EEEECCEEECCCHHHHHHHHHHHHHHhcCch
Confidence 8999999999999999999999999999886
No 16
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=3.8e-34 Score=249.00 Aligned_cols=171 Identities=21% Similarity=0.289 Sum_probs=154.8
Q ss_pred CCCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCC-CCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCC
Q 016237 199 GSDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKK-KAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVS 277 (392)
Q Consensus 199 ~~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 277 (392)
.|+++++++++++++..|+..|+++|+++||+++++|+++ ++ ++++.|..+.++..+++++..
T Consensus 3 ~m~kkv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~----------------v~~~~g~~i~~d~~l~~~~~~ 66 (190)
T 4e08_A 3 HMSKSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGEA----------------VKCSRDVQILPDTSLAQVASD 66 (190)
T ss_dssp -CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSSC----------------EECTTSCEEECSEETGGGTTC
T ss_pred CCCcEEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCcc----------------eecCCCcEEECCCCHHHCCcc
Confidence 3678999999999999999999999999999999999987 44 778889999999999998878
Q ss_pred CcCEEEEcCCC-ChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCC
Q 016237 278 GYDALVVPGGR-APEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDP 356 (392)
Q Consensus 278 ~~D~viipgg~-~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~ 356 (392)
+||+||||||. +...+..++.+.+||+++++++|+|+++|+|+++|+++|||+||++|+||...+.++. +..++++.
T Consensus 67 ~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~-~~~~~~~~- 144 (190)
T 4e08_A 67 KFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAKHGVASGKSLTSYPSMKPQLVN-NYSYVDDK- 144 (190)
T ss_dssp CCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGGGGSSS-SSEECSSC-
T ss_pred cCCEEEECCCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCeEEeCcCHHHHHhc-CCcccCCC-
Confidence 89999999996 4555788999999999999999999999999999999999999999999999888765 45666534
Q ss_pred CceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 357 IDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 357 ~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
.+|.|||+|||+|+.++.||++++|+++.|+
T Consensus 145 --~~v~dg~iiTs~g~~a~~d~al~li~~~~g~ 175 (190)
T 4e08_A 145 --TVVKDGNLITSRGPGTAYEFALKIAEELAGK 175 (190)
T ss_dssp --SEEEETTEEEECSGGGHHHHHHHHHHHHHCH
T ss_pred --cEEEECCEEECCChHHHHHHHHHHHHHhcCH
Confidence 5999999999999999999999999999875
No 17
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=8.7e-34 Score=250.01 Aligned_cols=170 Identities=13% Similarity=0.146 Sum_probs=155.5
Q ss_pred CCCccEEEEeCCCCCcchhHHHHHHHHhcC-------CeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccc
Q 016237 199 GSDKRILFLCGDYMEDYEVAVPFQSLQALE-------CHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANF 271 (392)
Q Consensus 199 ~~~~~v~ill~~~~~~~e~~~~~~~~~~~~-------~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 271 (392)
.+++++.++++++++..|+..++++|+.+| |+++++|+++++ ++++.|..+.+|..+
T Consensus 6 ~~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~~----------------v~~~~G~~v~~d~~~ 69 (209)
T 3er6_A 6 KKNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNRP----------------LIGRGGISVQPTAQW 69 (209)
T ss_dssp -CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSSC----------------EEETTTEEEECSSCG
T ss_pred CCCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCCc----------------eecCCCeEEeCCcCc
Confidence 357899999999999999999999999875 999999998775 788899999999999
Q ss_pred cCCCCCCcCEEEEcCCCChhh--ccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHH--Hc
Q 016237 272 ESVDVSGYDALVVPGGRAPEY--LALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVL--LA 347 (392)
Q Consensus 272 ~~~~~~~~D~viipgg~~~~~--~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~--~~ 347 (392)
+++ ++||+||||||.++.. +..++.+.+||+++++++++|++||+|+++|+++|||+||++||||...+.++ +|
T Consensus 70 ~~~--~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l~~~~p 147 (209)
T 3er6_A 70 QSF--DFTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKAGLLQQNKAVMHSYFAHLFGELFP 147 (209)
T ss_dssp GGC--SCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHTCCSSCEECCCHHHHHHHHHHCT
T ss_pred ccc--CCCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHcCCCCCCeeEECHHHHHHHHHHCC
Confidence 886 4899999999987654 46799999999999999999999999999999999999999999999998887 68
Q ss_pred CCeeeCCCCCceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 348 GASWLEPDPIDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 348 ~~~~~~~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
++++.++. .+|.|||+|||+|+.++.||++++|+++.|+
T Consensus 148 ~~~~~~~~---~~v~Dg~iiTs~G~~a~~dlal~li~~~~G~ 186 (209)
T 3er6_A 148 EIMLMTEQ---KALIDGNVYLSSGPYSHSSVMLEIVEEYFGK 186 (209)
T ss_dssp TSEECTTC---SEEEETTEEEECCSSCCHHHHHHHHHHHHCH
T ss_pred CcEEecCC---EEEEeCCEEECCcHHHHHHHHHHHHHHHhCH
Confidence 99998765 5999999999999999999999999999875
No 18
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=2e-34 Score=252.26 Aligned_cols=171 Identities=24% Similarity=0.365 Sum_probs=153.3
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCC-CCCCc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEI-DPSKY 86 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~ 86 (392)
++||+|+++|||+..|+..|+++|+++|++++++|++++. ++.++.|+++.++.+++++ ++.+|
T Consensus 3 ~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~---------------~v~~~~g~~v~~d~~l~~~~~~~~~ 67 (197)
T 2rk3_A 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKD---------------PVQCSRDVVICPDASLEDAKKEGPY 67 (197)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSS---------------CEECTTSCEECCSEEHHHHHTTCCC
T ss_pred CCEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCC---------------ccccCCCCEEeCCcCHHHcCCccCC
Confidence 3699999999999999999999999999999999998752 4788899999999999987 66799
Q ss_pred cEEEEcCCCC-cccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHH-CCCeEEcCCCc
Q 016237 87 DGLVIPGGRA-PEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGASWIEPETM 164 (392)
Q Consensus 87 D~iiipGG~~-~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~-~~~~~~~~~~~ 164 (392)
|+|+||||.+ ...+..++.+++||+++++++++|++||+|+++|+++|+|+||++|+||...+.+++ ++..+.+ .
T Consensus 68 D~livpGG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~-~-- 144 (197)
T 2rk3_A 68 DVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSE-N-- 144 (197)
T ss_dssp SEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECC-C--
T ss_pred CEEEECCCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCC-C--
Confidence 9999999974 445678999999999999999999999999999999999999999999999999986 4433433 3
Q ss_pred ceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 165 AACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 165 ~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
.+|.|||+|||+|+.+++||++++++.+.++.
T Consensus 145 -~~v~Dg~iiTs~g~~a~~d~al~li~~l~g~~ 176 (197)
T 2rk3_A 145 -RVEKDGLILTSRGPGTSFEFALAIVEALNGKE 176 (197)
T ss_dssp -SEEEETTEEEECSGGGHHHHHHHHHHHHHCHH
T ss_pred -CEEEeCCEEECCCHHHHHHHHHHHHHHhcCHH
Confidence 38999999999999999999999999998876
No 19
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=3.5e-34 Score=251.19 Aligned_cols=167 Identities=17% Similarity=0.190 Sum_probs=152.4
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcC------CeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALE------CHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFES 273 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~------~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~ 273 (392)
+++++.++++++++..|+..++++|+.+| |+++++|+++++ ++++.|..+.++ .+++
T Consensus 4 ~~~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~~----------------v~~~~G~~i~~d-~l~~ 66 (202)
T 3gra_A 4 APYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGDR----------------VLSDLGLELVAT-ELSA 66 (202)
T ss_dssp -CEEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSSE----------------EEBTTSCEEECE-ECCS
T ss_pred CcEEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCc----------------eEcCCCCEEECC-Cccc
Confidence 57899999999999999999999999986 999999998764 788899999999 9998
Q ss_pred CCCCCcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHH--HcCCee
Q 016237 274 VDVSGYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVL--LAGASW 351 (392)
Q Consensus 274 ~~~~~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~--~~~~~~ 351 (392)
.+.++||+||||||.+.... . +.+.+||+++++++++|++||+|+++|+++|||+||++||||...+.++ +|++++
T Consensus 67 ~~~~~~D~livpGG~~~~~~-~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~ 144 (202)
T 3gra_A 67 AALKELDLLVVCGGLRTPLK-Y-PELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRI 144 (202)
T ss_dssp GGGTTCSEEEEECCTTCCSC-C-TTHHHHHHHHHHHTCEEEEETTHHHHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEE
T ss_pred ccCCCCCEEEEeCCCchhhc-c-HHHHHHHHHHHhhCCEEEEECHHHHHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEe
Confidence 76779999999999876543 3 8999999999999999999999999999999999999999999998886 689998
Q ss_pred eCCCCCceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 352 LEPDPIDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 352 ~~~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
.++ .+|.|||+|||+|+.++.||++++|+++.|+
T Consensus 145 ~~~----~~v~dg~iiTs~G~~a~~dlal~li~~~~G~ 178 (202)
T 3gra_A 145 TPA----SFTLDRDRLSAASPNGAMELMLGLVRRLYGD 178 (202)
T ss_dssp CSS----SEEEETTEEEESSHHHHHHHHHHHHHHHHCH
T ss_pred cCC----eEEEeCCEEECCCHHHHHHHHHHHHHHHhCH
Confidence 754 4999999999999999999999999999875
No 20
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-33 Score=249.07 Aligned_cols=169 Identities=20% Similarity=0.239 Sum_probs=150.4
Q ss_pred CCEEEEEecCCCCccchHHHHHHHH--------hCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcC
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALL--------AFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFD 79 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~--------~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (392)
|+||+|+++|||+..|+..|+++|+ +++|+++++|++++ ++.++.|+++.+|..++
T Consensus 5 m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~----------------~v~~~~G~~i~~d~~~~ 68 (212)
T 3efe_A 5 TKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKE----------------MITTMGGLRIKPDISLD 68 (212)
T ss_dssp CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSC----------------CEECTTCCEECCSEEGG
T ss_pred ccEEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCC----------------eEEcCCCCEEecCcCHH
Confidence 5799999999999999999999999 78899999999876 58889999999999999
Q ss_pred CCCCCCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCC-CcHHHHHH-CCCe
Q 016237 80 EIDPSKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYP-PVKPVLIA-AGAS 157 (392)
Q Consensus 80 ~~~~~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~-~~~~~l~~-~~~~ 157 (392)
++++.+||+|+||||.+.. +..++.+++||+++++++++|++||+|+++|+++|||+||++|+|| ...+.+++ ++..
T Consensus 69 ~~~~~~~D~livpGG~~~~-~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~ 147 (212)
T 3efe_A 69 ECTLESKDLLILPGGTTWS-EEIHQPILERIGQALKIGTIVAAICGATDALANMGYLDTRKHTSNNLEYTKMVCPNYKGE 147 (212)
T ss_dssp GCCCCTTCEEEECCCSCTT-SGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHHTTTTSSSCBCCSCHHHHHHHCTTCCCT
T ss_pred HCCccCCCEEEECCCCccc-cccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHHcCCCCCCeeecCCHHHHHHHHhhCCCc
Confidence 9888899999999998754 4678999999999999999999999999999999999999999997 67777765 6543
Q ss_pred -EEcCCCcceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 158 -WIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 158 -~~~~~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+.... .+|+|||+|||+|+. ++||++++++.+.++.
T Consensus 148 ~~~~~~---~~V~Dg~iiTs~G~~-~~d~al~li~~l~g~~ 184 (212)
T 3efe_A 148 KFYELG---PAVSDANLVTASGIA-PLEFAMEVLKKIDVFT 184 (212)
T ss_dssp TTBCCC---SEEEETTEEEECTTC-HHHHHHHHHHHHTCSC
T ss_pred cccCCC---cEEEECCEEECCCch-HHHHHHHHHHHhcCCC
Confidence 22223 389999999999985 9999999999998864
No 21
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=2.4e-33 Score=250.62 Aligned_cols=168 Identities=23% Similarity=0.305 Sum_probs=153.4
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHh-cCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQA-LECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~-~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
|+++|.++++++++..|+..|+++|++ .+|+++++|+++++ +.++.|..+.++..+++++ +
T Consensus 4 m~~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~~----------------V~~~~G~~v~~d~~l~~~~--~ 65 (231)
T 3noq_A 4 MAVQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPGP----------------VVASSGLVLQATTSFADCP--P 65 (231)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSEE----------------EECTTSCEEEECEETTTCC--C
T ss_pred CcEEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCCc----------------EEcCCCCEEecccChhHCC--c
Confidence 568999999999999999999999999 78999999998775 7788899999999998864 7
Q ss_pred cCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCCCc
Q 016237 279 YDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDPID 358 (392)
Q Consensus 279 ~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~ 358 (392)
||+||||||.++..+..++.+.+||+++++++++|+++|+|+++|+++|||+||++||||...+.++..+..+.++
T Consensus 66 ~D~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~---- 141 (231)
T 3noq_A 66 LDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHE---- 141 (231)
T ss_dssp CSEEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCS----
T ss_pred CCEEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCC----
Confidence 9999999999887788899999999999999999999999999999999999999999999998887555556543
Q ss_pred eEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 359 RCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 359 ~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
++|.|||+|||+|++++.||++++|+++.|+
T Consensus 142 ~vV~Dg~iiTs~G~~a~~d~aL~li~~~~G~ 172 (231)
T 3noq_A 142 RVVRDGNLLTGGGITAGIDFALTLAAELFDA 172 (231)
T ss_dssp SEEEETTEEEECSTTHHHHHHHHHHHHHSCH
T ss_pred cEEEeCCEEECCCHHHHHHHHHHHHHHHcCH
Confidence 5999999999999999999999999999875
No 22
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.5e-33 Score=248.74 Aligned_cols=169 Identities=19% Similarity=0.267 Sum_probs=154.8
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhc--CCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQAL--ECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVS 277 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~--~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 277 (392)
..+++.++++++++..|+..++++|+++ +|+++++|+++++ ++++.|..+.++..+++.+
T Consensus 3 ~~~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~~----------------V~~~~G~~v~~d~~~~~~~-- 64 (211)
T 3mgk_A 3 LSYRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGGL----------------VESSQKVRVETSLYTRDEN-- 64 (211)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCEE----------------EECTTCCEEEEBCCCCCSS--
T ss_pred CceEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCCe----------------EecCCCcEEEeccchhhCC--
Confidence 4578999999999999999999999998 4999999998764 7788999999999888764
Q ss_pred CcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHH--HcCCeeeCCC
Q 016237 278 GYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVL--LAGASWLEPD 355 (392)
Q Consensus 278 ~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~--~~~~~~~~~~ 355 (392)
+||+||||||.++..+..++.+.+||+++++++|+|+++|+|+++|+++|||+||++||||...+.++ +|++++..+.
T Consensus 65 ~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~ 144 (211)
T 3mgk_A 65 IEKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEA 144 (211)
T ss_dssp SEEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSC
T ss_pred CCCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCC
Confidence 69999999998877778899999999999999999999999999999999999999999999999987 5888887665
Q ss_pred CCceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 356 PIDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 356 ~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
.+|.|||+|||+|+.++.||++++|+++.|+
T Consensus 145 ---~~v~Dg~iiTs~G~~a~~dlal~lv~~~~G~ 175 (211)
T 3mgk_A 145 ---RWVKDGNIYTSSGVSAGIDMTLGFIEDLIGK 175 (211)
T ss_dssp ---SEEEETTEEEECSHHHHHHHHHHHHHHHHCH
T ss_pred ---eEEEeCCEEECCCHHHHHHHHHHHHHHHhCH
Confidence 6999999999999999999999999999875
No 23
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=1.9e-33 Score=244.75 Aligned_cols=170 Identities=29% Similarity=0.562 Sum_probs=152.7
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccC-----CCCCcccccccccCC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSE-----KPGHNFTLTANFESV 274 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~i~~~~~~~~~ 274 (392)
+++++.++++++++..|+..|+++|+++||+++++|+++++ +.+ +.|..+.++..+++.
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~----------------v~~~~~~~~~g~~v~~~~~~~~~ 71 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPGE----------------IQSMKGDIEPQEKYRVDHVVSEV 71 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSSE----------------EEEEETTTEEEEEEECSEEGGGC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCc----------------cccccccccCCcEEeCCCChhhC
Confidence 46789999999999999999999999999999999998775 333 457778888889988
Q ss_pred CCCCcCEEEEcCCC-ChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeC
Q 016237 275 DVSGYDALVVPGGR-APEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLE 353 (392)
Q Consensus 275 ~~~~~D~viipgg~-~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~ 353 (392)
+..+||+||||||. +...+..++.+.+||+++++++|+|+++|+|+++|+++|||+||++||||...+.++..++++.+
T Consensus 72 ~~~~~D~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~ 151 (190)
T 2vrn_A 72 QVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSETGIAQGLKMTSWSSLKRELTLAGAQWVD 151 (190)
T ss_dssp CGGGCSEEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECC
T ss_pred ChhhCCEEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHhCcccCCcEEecCccHHHHHHHcCCeEEC
Confidence 77789999999998 55557889999999999999999999999999999999999999999999999999988899987
Q ss_pred CCCCceEEEcCCeEEccCCCChHHHHHHHHHHh-ccc
Q 016237 354 PDPIDRCFTDGNLVSGAAWPGHPEFISQLMALL-GIQ 389 (392)
Q Consensus 354 ~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l-~~~ 389 (392)
+. ++.|||+|||+|+.++.+|++++++++ .|+
T Consensus 152 ~~----~v~Dg~iiTs~g~~s~~~~~l~li~~l~~g~ 184 (190)
T 2vrn_A 152 EE----CVTDKGVVTSRKPDDLPAFNKKIVEEFAEGD 184 (190)
T ss_dssp CS----CEEETTEEECSSGGGHHHHHHHHHHHHHHCC
T ss_pred CC----EEEcCCEEEcCChhhHHHHHHHHHHHHhccc
Confidence 65 567999999999999999999999999 554
No 24
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=7.2e-34 Score=250.54 Aligned_cols=169 Identities=21% Similarity=0.348 Sum_probs=150.0
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
++||+|+++|||+..|+..|+++|+++||+++++|+++.. ++.++.|+++.++..++++++.+||
T Consensus 9 ~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~---------------~v~~~~G~~v~~d~~l~~~~~~~~D 73 (208)
T 3ot1_A 9 SKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKL---------------QVQGSRGVWLTAEQTLEACSAEAFD 73 (208)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCS---------------EEECTTSCEEECSEEGGGCCGGGCS
T ss_pred CCeEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCc---------------ceecCCCcEEeCCCCHHHCCCcCCC
Confidence 4799999999999999999999999999999999998521 5888999999999999998878999
Q ss_pred EEEEcCCCC-cccccCCHHHHHHHHHHHhCCCeEEEEchhh-HHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCcc
Q 016237 88 GLVIPGGRA-PEYLAMNDSVIDLVRKFSNSGKTIASICHGQ-LILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMA 165 (392)
Q Consensus 88 ~iiipGG~~-~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~-~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~ 165 (392)
+||||||.+ +..+..++.+++||+++++++|+|++||+|+ ++|+++|||+||++|+||...+.|. ...|.+..
T Consensus 74 ~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l~--~~~~~~~~--- 148 (208)
T 3ot1_A 74 ALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHIP--SERLSRQR--- 148 (208)
T ss_dssp EEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGSC--TTTBCCSS---
T ss_pred EEEECCCchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHcc--CCccccCc---
Confidence 999999974 5557789999999999999999999999999 9999999999999999999887662 23344333
Q ss_pred eeee--cCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 166 ACVV--DGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 166 ~~v~--dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
++. |||+|||+|+.+++||++++++.+.++.
T Consensus 149 -vv~d~dg~iiTs~g~~a~~d~al~lv~~l~G~~ 181 (208)
T 3ot1_A 149 -VCYYATQHLLTSQGPGTALEFALAMIALLAGVE 181 (208)
T ss_dssp -EEEEGGGTEEEECSGGGHHHHHHHHHHHHHCHH
T ss_pred -EEEeCCCCEEECCCHHHHHHHHHHHHHHhcCHH
Confidence 555 5699999999999999999999998876
No 25
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=8.2e-33 Score=241.01 Aligned_cols=170 Identities=31% Similarity=0.552 Sum_probs=155.2
Q ss_pred CCCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCC-cccccccccCCCCC
Q 016237 199 GSDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGH-NFTLTANFESVDVS 277 (392)
Q Consensus 199 ~~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~i~~~~~~~~~~~~ 277 (392)
.+++++.++++++++..|+..++++|+++||+++++|+++++ .+.++.|. .+.++..+++.+..
T Consensus 21 ~~~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~---------------~v~~~~g~~~v~~~~~l~~~~~~ 85 (193)
T 1oi4_A 21 GLSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGK---------------TVKGKKGEASVTIDKSIDEVTPA 85 (193)
T ss_dssp TCCCEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTTC---------------EEECTTSSCEEECCEEGGGCCGG
T ss_pred ccCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCc---------------ceecCCCCeEEECCCChHHCCcc
Confidence 357799999999999999999999999999999999998763 25667787 88889999988777
Q ss_pred CcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCCC
Q 016237 278 GYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDPI 357 (392)
Q Consensus 278 ~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~~ 357 (392)
+||+||||||.++..+..++.+.+||+++++++|+|+++|+|+++|+++|||+||++|+||...+.++..++++.++.
T Consensus 86 ~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~-- 163 (193)
T 1oi4_A 86 EFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQE-- 163 (193)
T ss_dssp GCSEEEECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSS--
T ss_pred cCCEEEECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCC--
Confidence 899999999987766778999999999999999999999999999999999999999999999999988799998765
Q ss_pred ceEEEcCC-eEEccCCCChHHHHHHHHHHhc
Q 016237 358 DRCFTDGN-LVSGAAWPGHPEFISQLMALLG 387 (392)
Q Consensus 358 ~~vv~dg~-lvT~~g~~~~~~~~~~li~~l~ 387 (392)
+|.||| +|||+|+.++.||++++|++|.
T Consensus 164 --~v~Dg~~iiTs~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 164 --VVVDKDQLVTSRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp --CEEETTTEEEESSGGGHHHHHHHHHHHHC
T ss_pred --EEEECCEEEECCCcchHHHHHHHHHHHhh
Confidence 789999 9999999999999999999985
No 26
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=1e-32 Score=243.74 Aligned_cols=169 Identities=20% Similarity=0.295 Sum_probs=151.5
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHH--------hcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccc
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQ--------ALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANF 271 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~--------~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 271 (392)
+|++++++++++++..|+..++++|+ +.+|+++++|+++++ +.++.|..+.+|..+
T Consensus 4 ~m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~~----------------v~~~~G~~i~~d~~~ 67 (212)
T 3efe_A 4 QTKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKEM----------------ITTMGGLRIKPDISL 67 (212)
T ss_dssp -CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSCC----------------EECTTCCEECCSEEG
T ss_pred cccEEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCCe----------------EEcCCCCEEecCcCH
Confidence 47899999999999999999999999 778999999998775 778889999999999
Q ss_pred cCCCCCCcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCc-hhHHHHH--HcC
Q 016237 272 ESVDVSGYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYP-AVKLNVL--LAG 348 (392)
Q Consensus 272 ~~~~~~~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~-~~~~~~~--~~~ 348 (392)
++++..+||+||||||.+.. +..++.+.+||+++++++|+|+++|+|+++|+++|||+||++|+|| .+.+.++ +|+
T Consensus 68 ~~~~~~~~D~livpGG~~~~-~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~ 146 (212)
T 3efe_A 68 DECTLESKDLLILPGGTTWS-EEIHQPILERIGQALKIGTIVAAICGATDALANMGYLDTRKHTSNNLEYTKMVCPNYKG 146 (212)
T ss_dssp GGCCCCTTCEEEECCCSCTT-SGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHHTTTTSSSCBCCSCHHHHHHHCTTCCC
T ss_pred HHCCccCCCEEEECCCCccc-cccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHHcCCCCCCeeecCCHHHHHHHHhhCCC
Confidence 99888899999999998753 5788999999999999999999999999999999999999999996 7777775 577
Q ss_pred CeeeCCCCCceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 349 ASWLEPDPIDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 349 ~~~~~~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
+.+..+. .+|.|||+|||+|+. +.||++++|+++.+.
T Consensus 147 ~~~~~~~---~~V~Dg~iiTs~G~~-~~d~al~li~~l~g~ 183 (212)
T 3efe_A 147 EKFYELG---PAVSDANLVTASGIA-PLEFAMEVLKKIDVF 183 (212)
T ss_dssp TTTBCCC---SEEEETTEEEECTTC-HHHHHHHHHHHHTCS
T ss_pred ccccCCC---cEEEECCEEECCCch-HHHHHHHHHHHhcCC
Confidence 6544444 599999999999985 999999999999885
No 27
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=5.1e-33 Score=251.05 Aligned_cols=169 Identities=25% Similarity=0.295 Sum_probs=154.1
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHH-HhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSL-QALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~-~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
++++|.++++++++..|+..++++| +..+|+++++|+++++ +.++.|..+.++..++++. ..
T Consensus 22 m~~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~~----------------V~~~~G~~i~~d~~l~~~~-~~ 84 (253)
T 3ewn_A 22 GDEQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLDP----------------VTSDAGLAIVPTATFGTCP-RD 84 (253)
T ss_dssp CCCEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSSC----------------EECTTSCEECCSEETTTSC-SS
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCCe----------------EEcCCCCEEeCCcCHHHcC-CC
Confidence 5689999999999999999999999 5779999999999875 7788899999999999876 48
Q ss_pred cCEEEEcCCC-ChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCCC
Q 016237 279 YDALVVPGGR-APEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDPI 357 (392)
Q Consensus 279 ~D~viipgg~-~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~~ 357 (392)
||+||||||. ++..+..++.+++||+++++++++|++||+|+++|+++|||+||++||||...+.++..+..+.++
T Consensus 85 yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~--- 161 (253)
T 3ewn_A 85 LTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILGAAGLLKGYKATSHWSCRDALAGFGAIPTEA--- 161 (253)
T ss_dssp CSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCS---
T ss_pred CCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCC---
Confidence 9999999998 776788899999999999999999999999999999999999999999999998888555666644
Q ss_pred ceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 358 DRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 358 ~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
.+|.|||+|||+|++++.||+++||+++.|+
T Consensus 162 -~vV~Dg~iiTs~G~~a~idlaL~lv~~l~G~ 192 (253)
T 3ewn_A 162 -RVVRDRNRITGAGVTAGLDFGLSMVAELRDQ 192 (253)
T ss_dssp -SEEEETTEEEECSTTHHHHHHHHHHHHHSCH
T ss_pred -cEEEECCEEECCCHHHHHHHHHHHHHHHcCH
Confidence 5999999999999999999999999999885
No 28
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=5.2e-33 Score=261.71 Aligned_cols=173 Identities=28% Similarity=0.485 Sum_probs=158.6
Q ss_pred CCCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCC-cccccccccCCCCC
Q 016237 199 GSDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGH-NFTLTANFESVDVS 277 (392)
Q Consensus 199 ~~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~i~~~~~~~~~~~~ 277 (392)
.++++|+++++++++..|+..|+++|+.+||+++++|+++++ .+.++.|. .+.++..++++++.
T Consensus 8 ~~mkkV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g~---------------~V~ss~G~~~i~~d~~l~~v~~~ 72 (365)
T 3fse_A 8 SGKKKVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMNE---------------KYKGKRGRLSTQADGTTTEAIAS 72 (365)
T ss_dssp ---CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSSC---------------CEECTTSCCEECCSEETTTCCGG
T ss_pred CCceEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCCc---------------eeecCCCceEEeCCCCHhhCCCc
Confidence 467899999999999999999999999999999999998764 25677888 89999999998777
Q ss_pred CcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCCC
Q 016237 278 GYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDPI 357 (392)
Q Consensus 278 ~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~~ 357 (392)
+||+||||||.++..+..++.+.+||+++++++++|+++|+|+++|+++|||+||++||||...+.++++++++.+.
T Consensus 73 ~~DaLiVPGG~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~--- 149 (365)
T 3fse_A 73 EFDAVVIPGGMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIEGDLLRGKQATGFIAISKDMMNAGADYLDE--- 149 (365)
T ss_dssp GCSEEEECCBTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCS---
T ss_pred CCCEEEEECCcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecC---
Confidence 89999999999877778999999999999999999999999999999999999999999999999999999999864
Q ss_pred ceEEEcCCeEEccCCCChHHHHHHHHHHhcccc
Q 016237 358 DRCFTDGNLVSGAAWPGHPEFISQLMALLGIQV 390 (392)
Q Consensus 358 ~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~~ 390 (392)
.+|.|||+|||+|+.++.||++++|++|.|+.
T Consensus 150 -~vV~DGniITs~G~~a~~d~al~lIe~L~g~~ 181 (365)
T 3fse_A 150 -ALVVDGNLITSREPGDLAIFTTAILSRLGYGG 181 (365)
T ss_dssp -SCEEETTEEEECSGGGHHHHHHHHHHHTTCCC
T ss_pred -cEEEECCEEECCCHHHHHHHHHHHHHHhcCch
Confidence 48999999999999999999999999999863
No 29
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=4.5e-33 Score=243.68 Aligned_cols=171 Identities=23% Similarity=0.297 Sum_probs=152.8
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCC-CCCC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESV-DVSG 278 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~-~~~~ 278 (392)
|++++.++++++++..|+..|+++|+++||+++++|++++. .+.++.|..+.++..+++. +..+
T Consensus 2 m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~---------------~v~~~~g~~v~~d~~l~~~~~~~~ 66 (197)
T 2rk3_A 2 ASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKD---------------PVQCSRDVVICPDASLEDAKKEGP 66 (197)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSS---------------CEECTTSCEECCSEEHHHHHTTCC
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCC---------------ccccCCCCEEeCCcCHHHcCCccC
Confidence 46789999999999999999999999999999999998752 2677888889999888887 6679
Q ss_pred cCEEEEcCCCC-hhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcC-CeeeCCCC
Q 016237 279 YDALVVPGGRA-PEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAG-ASWLEPDP 356 (392)
Q Consensus 279 ~D~viipgg~~-~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~-~~~~~~~~ 356 (392)
||+||||||.+ ...+..++.+.+||+++++++|+|+++|+|+++|+++|||+||++|+||...+.++..+ .++.+.
T Consensus 67 ~D~livpGG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~-- 144 (197)
T 2rk3_A 67 YDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSEN-- 144 (197)
T ss_dssp CSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCC--
T ss_pred CCEEEECCCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCC--
Confidence 99999999974 45578899999999999999999999999999999999999999999999999887433 455443
Q ss_pred CceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 357 IDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 357 ~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
.+|.|||+|||+|+.++.||++++|+++.|+
T Consensus 145 --~~v~Dg~iiTs~g~~a~~d~al~li~~l~g~ 175 (197)
T 2rk3_A 145 --RVEKDGLILTSRGPGTSFEFALAIVEALNGK 175 (197)
T ss_dssp --SEEEETTEEEECSGGGHHHHHHHHHHHHHCH
T ss_pred --CEEEeCCEEECCCHHHHHHHHHHHHHHhcCH
Confidence 5999999999999999999999999999875
No 30
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=3.7e-33 Score=243.01 Aligned_cols=172 Identities=19% Similarity=0.317 Sum_probs=152.4
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCC---
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDV--- 276 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~--- 276 (392)
.|+||++++++|+++.|+..|+++|+++|++++++++..+. ...++++.|..+.+|..++++..
T Consensus 3 ~M~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~-------------~~~v~~~~g~~v~~d~~~~~~~~~d~ 69 (194)
T 4gdh_A 3 HMVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENK-------------DRLVKMSRDVEMYANRSYKEIPSADD 69 (194)
T ss_dssp --CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCT-------------TCEEECTTSCEEECSEEGGGSCCHHH
T ss_pred CCCEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCC-------------CceEecCCCceeeccccHhhCCcccc
Confidence 58899999999999999999999999999999999986542 23467788999999998888754
Q ss_pred --CCcCEEEEcCCC-ChhhccCChHHHHHHHHHHHc-CCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeee
Q 016237 277 --SGYDALVVPGGR-APEYLALNENVIALVKDFMEA-KKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWL 352 (392)
Q Consensus 277 --~~~D~viipgg~-~~~~~~~~~~l~~~l~~~~~~-g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~ 352 (392)
++||+|+||||. +++.+..++.+.+|||+++++ +|+++++|+|+ +|+.+|+|+||++||||..++++++.+++|.
T Consensus 70 ~~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~-~l~~aglL~gr~~T~~~~~~~~l~~~g~~~~ 148 (194)
T 4gdh_A 70 FAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGT-LTAKTSGLPNKQITGHPSVRGQLEEGGYKYL 148 (194)
T ss_dssp HHHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGG-HHHHHTTCCCSEECCCGGGHHHHHHTTCEEC
T ss_pred ccccCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccc-cchhhceecCCceEecCcHHHHHHhcCCeee
Confidence 369999999997 466789999999999999975 78999999998 5778899999999999999999999999998
Q ss_pred CCCCCceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 353 EPDPIDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 353 ~~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
+++ +|.|||+|||+|+.++.||+++++++|.|+
T Consensus 149 d~~----vV~Dg~iiTs~g~~~~~d~al~lve~l~G~ 181 (194)
T 4gdh_A 149 DQP----VVLEENLITSQGPGTAMLFGLKLLEQVASK 181 (194)
T ss_dssp CSS----EEEETTEEEECSGGGHHHHHHHHHHHHSCH
T ss_pred cce----EEEcCCEEECCCHhHHHHHHHHHHHHHcCH
Confidence 764 999999999999999999999999999885
No 31
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=1.6e-33 Score=248.35 Aligned_cols=168 Identities=21% Similarity=0.271 Sum_probs=152.3
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCC-CCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKK-KAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
|++++.++++++++..|+..++++|+++||+++++|+++ ++ +.++.|..+.++..+++++..+
T Consensus 8 m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~~----------------v~~~~G~~v~~d~~l~~~~~~~ 71 (208)
T 3ot1_A 8 MSKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKLQ----------------VQGSRGVWLTAEQTLEACSAEA 71 (208)
T ss_dssp -CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCSE----------------EECTTSCEEECSEEGGGCCGGG
T ss_pred cCCeEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCcc----------------eecCCCcEEeCCCCHHHCCCcC
Confidence 578999999999999999999999999999999999985 33 7788899999999999987789
Q ss_pred cCEEEEcCCCC-hhhccCChHHHHHHHHHHHcCCcEEEEehHH-HHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCC
Q 016237 279 YDALVVPGGRA-PEYLALNENVIALVKDFMEAKKPVASICHGQ-QILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDP 356 (392)
Q Consensus 279 ~D~viipgg~~-~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~-~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~ 356 (392)
||+||||||.+ ...+..++.+.+||+++++++|+|+++|+|+ ++|+++|||+||++|+||...+.+ |+++|.++.
T Consensus 72 ~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l--~~~~~~~~~- 148 (208)
T 3ot1_A 72 FDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHI--PSERLSRQR- 148 (208)
T ss_dssp CSEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGS--CTTTBCCSS-
T ss_pred CCEEEECCCchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHc--cCCccccCc-
Confidence 99999999974 5567889999999999999999999999999 999999999999999999998776 778887654
Q ss_pred CceEEE--cCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 357 IDRCFT--DGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 357 ~~~vv~--dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
+|. |||+|||+|+.++.||++++|+++.|+
T Consensus 149 ---vv~d~dg~iiTs~g~~a~~d~al~lv~~l~G~ 180 (208)
T 3ot1_A 149 ---VCYYATQHLLTSQGPGTALEFALAMIALLAGV 180 (208)
T ss_dssp ---EEEEGGGTEEEECSGGGHHHHHHHHHHHHHCH
T ss_pred ---EEEeCCCCEEECCCHHHHHHHHHHHHHHhcCH
Confidence 565 569999999999999999999999875
No 32
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=100.00 E-value=3.8e-33 Score=242.27 Aligned_cols=169 Identities=22% Similarity=0.327 Sum_probs=148.7
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHh-CCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKY 86 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~-ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 86 (392)
|+||+|+++|||+..|+..|+++|++ ++|+++++|++++ ++.++.|.++.++.+++++++.+|
T Consensus 1 m~~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~----------------~v~~~~g~~v~~~~~~~~~~~~~~ 64 (188)
T 2fex_A 1 MTRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGM----------------PVTSMGGLKVTPDTSYDALDPVDI 64 (188)
T ss_dssp CCEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSS----------------CEECTTCCEEECSEEGGGCCTTTC
T ss_pred CcEEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCC----------------ceeeCCCcEEeccccHHHCCcccC
Confidence 36999999999999999999999999 9999999999876 477888999999999999887799
Q ss_pred cEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHH-CCC--eEEcCCC
Q 016237 87 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGA--SWIEPET 163 (392)
Q Consensus 87 D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~-~~~--~~~~~~~ 163 (392)
|+|+||||.+.. +..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.+++ ++. .+.+..+
T Consensus 65 D~livpGG~~~~-~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~~ 143 (188)
T 2fex_A 65 DALVIPGGLSWE-KGTAADLGGLVKRFRDRDRLVAGICAAASALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQPR 143 (188)
T ss_dssp SEEEECCBSHHH-HTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCSS
T ss_pred CEEEECCCCccc-ccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCCC
Confidence 999999998654 457889999999999999999999999999999999999999999976555544 554 2443332
Q ss_pred cceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 164 MAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 164 ~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+|.|||+|||+|+. ++||++++++.+.+..
T Consensus 144 ---~v~Dg~iiTs~g~~-~~d~al~lv~~l~~~~ 173 (188)
T 2fex_A 144 ---AVSDGGVVTAAGSA-PVSFAVEILKSLGLFG 173 (188)
T ss_dssp ---CEEETTEEEECTTC-HHHHHHHHHHHTTCCS
T ss_pred ---EEEECCEEECCCcc-HHHHHHHHHHHccCCC
Confidence 89999999999985 8999999999998765
No 33
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=100.00 E-value=2.8e-32 Score=243.58 Aligned_cols=180 Identities=23% Similarity=0.373 Sum_probs=150.4
Q ss_pred CEEEEEec----------CCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCccccccccc-----Cccc
Q 016237 9 RSVLLLCG----------DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRG-----HNFA 73 (392)
Q Consensus 9 ~kI~ill~----------~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~ 73 (392)
|||+|+++ +||+..|+..|+++|+++||+++++|+++++......++.+ ...+ .++.
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~~v~~~~~~~~~--------~~~~~~~~~~~i~ 77 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGGEVPLDPRSINE--------KDPSWAEAEAALK 77 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCBCCCBCGGGSSS--------CCGGGHHHHHHTT
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCCccccCcccccc--------HHHHHhhhhHhhc
Confidence 69999999 99999999999999999999999999998642111000000 0113 5688
Q ss_pred cCcCcCCCCCCCccEEEEcCCCCcc-cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCc------ccCCeeEecCCC
Q 016237 74 LNATFDEIDPSKYDGLVIPGGRAPE-YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD------VVKGRKCTAYPP 146 (392)
Q Consensus 74 ~~~~~~~~~~~~~D~iiipGG~~~~-~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ag------ll~g~~~T~~~~ 146 (392)
++..++++++.+||+||||||++.. .+..++.+++||+++++++|+|++||+|+++|+++| ||+||++|+||.
T Consensus 78 ~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La~ag~~~g~~lL~Gr~~T~~~~ 157 (224)
T 1u9c_A 78 HTARLSKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNATYKDGTPIVKGKTVTSFTD 157 (224)
T ss_dssp SBEECCGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTSCBTTTTCEECCSCH
T ss_pred CCCChHHcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHHHccccCCCceecCcEEecCCC
Confidence 8989998877799999999999864 478899999999999999999999999999999999 999999999998
Q ss_pred cHH---------------HHHHCCCeEEcCCCc-ceeeecCceEecCCCCChHHHHHHHHHHhcCC
Q 016237 147 VKP---------------VLIAAGASWIEPETM-AACVVDGNIITGATYEGHPEFIRLFLKALGGT 196 (392)
Q Consensus 147 ~~~---------------~l~~~~~~~~~~~~~-~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~ 196 (392)
..+ .|++.+..+.+.+.+ ..+|+|||+|||+|+.++++|++++++.+.++
T Consensus 158 ~~~~~~~~~~~~p~~~~~~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~ 223 (224)
T 1u9c_A 158 EEEREVGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEER 223 (224)
T ss_dssp HHHHHHTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTT
T ss_pred HHHhhccccccCCccHHHHHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhcc
Confidence 655 466677788766421 24899999999999999999999999998875
No 34
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=99.98 E-value=2.9e-32 Score=236.68 Aligned_cols=168 Identities=24% Similarity=0.365 Sum_probs=149.1
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHh-cCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCc
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQA-LECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGY 279 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~-~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 279 (392)
|+++.+++++++++.|+..++++|++ .+|+++++|+++++ +.++.|..+.++..+++.+..+|
T Consensus 1 m~~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~~----------------v~~~~g~~v~~~~~~~~~~~~~~ 64 (188)
T 2fex_A 1 MTRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGMP----------------VTSMGGLKVTPDTSYDALDPVDI 64 (188)
T ss_dssp CCEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSSC----------------EECTTCCEEECSEEGGGCCTTTC
T ss_pred CcEEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCCc----------------eeeCCCcEEeccccHHHCCcccC
Confidence 57899999999999999999999999 99999999998775 67788999999999998877799
Q ss_pred CEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHH--HcCC-eeeCCCC
Q 016237 280 DALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVL--LAGA-SWLEPDP 356 (392)
Q Consensus 280 D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~--~~~~-~~~~~~~ 356 (392)
|+||||||.+.. +..++.+.+||+++++++|+|+++|+|+++|+++|||+||++|+||.....++ +|++ .+.++.
T Consensus 65 D~livpGG~~~~-~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~- 142 (188)
T 2fex_A 65 DALVIPGGLSWE-KGTAADLGGLVKRFRDRDRLVAGICAAASALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQP- 142 (188)
T ss_dssp SEEEECCBSHHH-HTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCS-
T ss_pred CEEEECCCCccc-ccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCC-
Confidence 999999998753 46789999999999999999999999999999999999999999998666543 6776 455432
Q ss_pred CceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 357 IDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 357 ~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
++|.|||+|||+|++ +.||++++|+++.+.
T Consensus 143 --~~v~Dg~iiTs~g~~-~~d~al~lv~~l~~~ 172 (188)
T 2fex_A 143 --RAVSDGGVVTAAGSA-PVSFAVEILKSLGLF 172 (188)
T ss_dssp --SCEEETTEEEECTTC-HHHHHHHHHHHTTCC
T ss_pred --CEEEECCEEECCCcc-HHHHHHHHHHHccCC
Confidence 289999999999985 899999999999875
No 35
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.98 E-value=2.2e-32 Score=245.56 Aligned_cols=189 Identities=19% Similarity=0.271 Sum_probs=150.0
Q ss_pred CCEEEEEecC------------CCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccC----CCCccccc---ccc
Q 016237 8 KRSVLLLCGD------------YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQ----STGHQTYS---ETR 68 (392)
Q Consensus 8 ~~kI~ill~~------------g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~----~~~~~~~~---~~~ 68 (392)
|+||+|++.+ ||+..|+..|+++|+++|++|+++|+++++. .+..++.. ....+.+. ++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~~~-~d~~s~~~~~~~~~~~~~~~~~~~~~ 81 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFG-WDEHYLPKSFIGGEDKMNFETKNSAF 81 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSCCC-BCTTC--------------------C
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCCCC-cCCccccccccCHHHHHHHHHhhHHH
Confidence 5799999973 7888999999999999999999999987641 21111110 00111121 234
Q ss_pred cCccccCcCcCCCCCCCccEEEEcCCCCc-ccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC-------cccCCee
Q 016237 69 GHNFALNATFDEIDPSKYDGLVIPGGRAP-EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA-------DVVKGRK 140 (392)
Q Consensus 69 g~~~~~~~~~~~~~~~~~D~iiipGG~~~-~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a-------gll~g~~ 140 (392)
+.++.++.+++++++.+||+||||||+++ ..+..++.+.+||+++++++|+|++||+|+++|+++ |||+||+
T Consensus 82 ~~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a~~~~~g~gll~G~~ 161 (244)
T 3kkl_A 82 NKALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKA 161 (244)
T ss_dssp HHHHHTCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCE
T ss_pred HHHhcCCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhhccccCCceeCCce
Confidence 56789999999999899999999999986 457899999999999999999999999999999999 9999999
Q ss_pred EecCCCcH-------------------HHHHHCCCeEEcC--CCcceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 141 CTAYPPVK-------------------PVLIAAGASWIEP--ETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 141 ~T~~~~~~-------------------~~l~~~~~~~~~~--~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+|+||..+ +.|++.|+.|.+. +.+..+|+|||+|||+|+.++.++++++++.+..-+
T Consensus 162 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~~ 239 (244)
T 3kkl_A 162 ITGFPLEGEIALGVDDILRSRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSVE 239 (244)
T ss_dssp ECCSCHHHHHHHTTHHHHHHTTCCCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC--
T ss_pred ecCCCcHHHHhhhhhhhccccccccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhhh
Confidence 99999874 3455678899874 112349999999999999999999999999987643
No 36
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=99.98 E-value=3.2e-32 Score=238.95 Aligned_cols=163 Identities=21% Similarity=0.232 Sum_probs=142.4
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhC-CCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAF-GVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKY 86 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~a-g~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 86 (392)
|+||+|+++|||+..|+..|.++|+++ +|+++++|++++ +.++.|+++.++.+++++ +.+|
T Consensus 3 m~kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~-----------------V~~~~G~~v~~d~~l~~~-~~~~ 64 (206)
T 3f5d_A 3 LKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPI-----------------VSSIGGFKTSVDYIIGLE-PANF 64 (206)
T ss_dssp CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSE-----------------EEBTTSCEEECSEETTSS-CSCC
T ss_pred ccEEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCC-----------------EEecCCcEEecCcChhhC-CcCC
Confidence 579999999999999999999999998 999999999862 667889999999999987 4689
Q ss_pred cEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHH----C-CCeEEcC
Q 016237 87 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA----A-GASWIEP 161 (392)
Q Consensus 87 D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~----~-~~~~~~~ 161 (392)
|+|+||||.++.. .++.+++||+++++++++|++||+|+++|+++|||+||++|+||. +.+++ + +..+.+
T Consensus 65 D~livpGG~~~~~--~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGLL~Gr~aTthw~--~~~~~~~~~~~~~~~~~- 139 (206)
T 3f5d_A 65 NLLVMIGGDSWSN--DNKKLLHFVKTAFQKNIPIAAICGAVDFLAKNGLLNNHSHTGNFV--YLWKDYKQYKPISSFVE- 139 (206)
T ss_dssp SEEEECCBSCCCC--CCHHHHHHHHHHHHTTCCEEEETHHHHHHHHTTTTTTSCBCCSCG--GGGTTCTTCCCSSCBCC-
T ss_pred CEEEEcCCCChhh--cCHHHHHHHHHHHHcCCEEEEECHHHHHHHHcCCCCCCEEEccCH--HHhhhhHhhcCCCeEcc-
Confidence 9999999987764 889999999999999999999999999999999999999999994 23332 2 344543
Q ss_pred CCcceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 162 ETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 162 ~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+ .+|+|||+|||+|+. ++||++++++.+..+.
T Consensus 140 ~---~~V~Dg~iiTs~G~a-~id~al~li~~l~~~~ 171 (206)
T 3f5d_A 140 K---QAVRDKNLVTANGTA-PIEFTNLILEMIDFDT 171 (206)
T ss_dssp S---SEEEETTEEEECTTC-HHHHHHHHHHHTTCSC
T ss_pred C---CEEEECCEEECCCch-HHHHHHHHHHHhCcch
Confidence 3 389999999999985 9999999999887544
No 37
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=99.97 E-value=1.9e-32 Score=241.07 Aligned_cols=171 Identities=19% Similarity=0.276 Sum_probs=151.5
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCc
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGY 279 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 279 (392)
|++++.++++++++..|+..|+++|+++||+++++|++++.. ..+.++.|..+.++..+++++..+|
T Consensus 1 M~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~-------------~~v~~~~g~~v~~~~~l~~~~~~~~ 67 (205)
T 2ab0_A 1 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGN-------------LAITCSRGVKLLADAPLVEVADGEY 67 (205)
T ss_dssp -CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTC-------------CEEECTTSCEEECSEEHHHHTTSCC
T ss_pred CCcEEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCC-------------ceeecCCCeEEecCCCHHHCCcccC
Confidence 457899999999999999999999999999999999987610 0267788888999988998877799
Q ss_pred CEEEEcCCCC-hhhccCChHHHHHHHHHHHcCCcEEEEehHH-HHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCCCC
Q 016237 280 DALVVPGGRA-PEYLALNENVIALVKDFMEAKKPVASICHGQ-QILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPDPI 357 (392)
Q Consensus 280 D~viipgg~~-~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~-~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~~~ 357 (392)
|+||||||.+ +..+..++.+.+||+++++++|+|+++|+|+ ++|+++|||+||++||||..++.+ +++++.++
T Consensus 68 D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~--~~~~~~~~--- 142 (205)
T 2ab0_A 68 DVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKI--PAEQWLDK--- 142 (205)
T ss_dssp SEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGS--CTTTBCCC---
T ss_pred CEEEECCCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHc--cCCEEecC---
Confidence 9999999974 5557789999999999999999999999999 999999999999999999977644 66777765
Q ss_pred ceEEEcCCe--EEccCCCChHHHHHHHHHHhccc
Q 016237 358 DRCFTDGNL--VSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 358 ~~vv~dg~l--vT~~g~~~~~~~~~~li~~l~~~ 389 (392)
.+|.|||+ |||+|+.++.||++++++++.|.
T Consensus 143 -~vv~Dg~i~viTs~g~~s~~d~al~li~~l~g~ 175 (205)
T 2ab0_A 143 -RVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGR 175 (205)
T ss_dssp -SEEEETTTTEEEECSGGGHHHHHHHHHHHHTCH
T ss_pred -CEEEeCCcCeEECcChhhHHHHHHHHHHHhcCh
Confidence 48899999 99999999999999999999875
No 38
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.97 E-value=5.3e-32 Score=244.30 Aligned_cols=187 Identities=19% Similarity=0.290 Sum_probs=148.4
Q ss_pred CCEEEEEec------------CCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCC----CCcccc---cccc
Q 016237 8 KRSVLLLCG------------DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQS----TGHQTY---SETR 68 (392)
Q Consensus 8 ~~kI~ill~------------~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~----~~~~~~---~~~~ 68 (392)
|+||+|++. +|++..|+..|+++|+++||+|+++|+++++. .+..++... ...+.+ .++.
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~~~-~d~~s~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFG-WDEHSLAKDFLNGQDETDFKNKDSDF 81 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSCCC-BCGGGGSTTTSCHHHHHHHHCTTSHH
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCCCC-cCcccccccccChHHHHHHHhhhHHH
Confidence 469999997 68888999999999999999999999987631 111111000 000000 1134
Q ss_pred cCccccCcCcCCCCCCCccEEEEcCCCCcc-cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCc-------ccCCee
Q 016237 69 GHNFALNATFDEIDPSKYDGLVIPGGRAPE-YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD-------VVKGRK 140 (392)
Q Consensus 69 g~~~~~~~~~~~~~~~~~D~iiipGG~~~~-~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ag-------ll~g~~ 140 (392)
|.++.++..++++++.+||+||||||+++. .+..++.+++||+++++++++|++||+|+++|+++| ||+||+
T Consensus 82 g~~l~~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~ag~~~~g~~lL~G~~ 161 (243)
T 1rw7_A 82 NKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKS 161 (243)
T ss_dssp HHHHHTCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCE
T ss_pred HhhhccCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHHhcCcccCCceeeCCcE
Confidence 667888999999888899999999999864 477899999999999999999999999999999999 999999
Q ss_pred EecCCCcHHH-------------------HHHCCCeEEcC--CCcceeeecCceEecCCCCChHHHHHHHHHHhcC
Q 016237 141 CTAYPPVKPV-------------------LIAAGASWIEP--ETMAACVVDGNIITGATYEGHPEFIRLFLKALGG 195 (392)
Q Consensus 141 ~T~~~~~~~~-------------------l~~~~~~~~~~--~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~ 195 (392)
+|+||..++. |++.++.+... +.+..+|+|||+|||+|+.++++|++++++.+..
T Consensus 162 ~T~~~~~~e~~~~~~~~~p~~~~~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 162 ITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp ECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred EeecCCHHHhhccccccccccccccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 9999986554 55567888742 1123499999999999999999999999997753
No 39
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=1.3e-31 Score=234.97 Aligned_cols=164 Identities=23% Similarity=0.283 Sum_probs=144.3
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhc-CCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQAL-ECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~-~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
+|+++.++++++++..|+..+.++|+++ +|+++++|++++ ++++.|..+.++..++++ +.+
T Consensus 2 ~m~kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~-----------------V~~~~G~~v~~d~~l~~~-~~~ 63 (206)
T 3f5d_A 2 SLKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPI-----------------VSSIGGFKTSVDYIIGLE-PAN 63 (206)
T ss_dssp -CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSE-----------------EEBTTSCEEECSEETTSS-CSC
T ss_pred CccEEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCC-----------------EEecCCcEEecCcChhhC-CcC
Confidence 4789999999999999999999999998 999999999753 567789999999999987 468
Q ss_pred cCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHH---HHHcCCeeeCCC
Q 016237 279 YDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLN---VLLAGASWLEPD 355 (392)
Q Consensus 279 ~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~---~~~~~~~~~~~~ 355 (392)
||+|+||||.++.. .++.+.+||+++++++++|++||+|+++|+++|||+||++||||..... ..++++++.+.
T Consensus 64 ~D~livpGG~~~~~--~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGLL~Gr~aTthw~~~~~~~~~~~~~~~~~~~- 140 (206)
T 3f5d_A 64 FNLLVMIGGDSWSN--DNKKLLHFVKTAFQKNIPIAAICGAVDFLAKNGLLNNHSHTGNFVYLWKDYKQYKPISSFVEK- 140 (206)
T ss_dssp CSEEEECCBSCCCC--CCHHHHHHHHHHHHTTCCEEEETHHHHHHHHTTTTTTSCBCCSCGGGGTTCTTCCCSSCBCCS-
T ss_pred CCEEEEcCCCChhh--cCHHHHHHHHHHHHcCCEEEEECHHHHHHHHcCCCCCCEEEccCHHHhhhhHhhcCCCeEccC-
Confidence 99999999998655 8999999999999999999999999999999999999999999943211 12468888754
Q ss_pred CCceEEEcCCeEEccCCCChHHHHHHHHHHhcc
Q 016237 356 PIDRCFTDGNLVSGAAWPGHPEFISQLMALLGI 388 (392)
Q Consensus 356 ~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~ 388 (392)
.+|.|||+|||+|+. +.||++++|++|..
T Consensus 141 ---~~V~Dg~iiTs~G~a-~id~al~li~~l~~ 169 (206)
T 3f5d_A 141 ---QAVRDKNLVTANGTA-PIEFTNLILEMIDF 169 (206)
T ss_dssp ---SEEEETTEEEECTTC-HHHHHHHHHHHTTC
T ss_pred ---CEEEECCEEECCCch-HHHHHHHHHHHhCc
Confidence 499999999999985 99999999998874
No 40
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=99.97 E-value=8.7e-33 Score=243.17 Aligned_cols=170 Identities=24% Similarity=0.394 Sum_probs=148.9
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
+||+|+++|||+..|+..|+++|+++||+++++|++++.. .++.++.|.++.++.+++++++.+||+
T Consensus 3 ~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~-------------~~v~~~~g~~v~~~~~l~~~~~~~~D~ 69 (205)
T 2ab0_A 3 ASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGN-------------LAITCSRGVKLLADAPLVEVADGEYDV 69 (205)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTC-------------CEEECTTSCEEECSEEHHHHTTSCCSE
T ss_pred cEEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCC-------------ceeecCCCeEEecCCCHHHCCcccCCE
Confidence 6999999999999999999999999999999999987510 037778899999999999887779999
Q ss_pred EEEcCCCC-cccccCCHHHHHHHHHHHhCCCeEEEEchhh-HHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCcce
Q 016237 89 LVIPGGRA-PEYLAMNDSVIDLVRKFSNSGKTIASICHGQ-LILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAA 166 (392)
Q Consensus 89 iiipGG~~-~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~-~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~~ 166 (392)
||||||.+ +..+..++.+.+||+++++++|+|++||+|+ ++|+++|||+||++|+||..++.+.+ ..+.+ +.
T Consensus 70 livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~~~--~~~~~-~~--- 143 (205)
T 2ab0_A 70 IVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPA--EQWLD-KR--- 143 (205)
T ss_dssp EEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGSCT--TTBCC-CS---
T ss_pred EEECCCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHccC--CEEec-CC---
Confidence 99999974 5556789999999999999999999999999 99999999999999999987654432 23433 32
Q ss_pred eeecCce--EecCCCCChHHHHHHHHHHhcCCc
Q 016237 167 CVVDGNI--ITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 167 ~v~dg~i--iT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+|+|||+ |||+|+.++.|+++++++.+.++.
T Consensus 144 vv~Dg~i~viTs~g~~s~~d~al~li~~l~g~~ 176 (205)
T 2ab0_A 144 VVWDARVKLLTSQGPGTAIDFGLKIIDLLVGRE 176 (205)
T ss_dssp EEEETTTTEEEECSGGGHHHHHHHHHHHHTCHH
T ss_pred EEEeCCcCeEECcChhhHHHHHHHHHHHhcChH
Confidence 7889999 999999999999999999998876
No 41
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=99.97 E-value=1.7e-32 Score=245.05 Aligned_cols=167 Identities=20% Similarity=0.249 Sum_probs=149.1
Q ss_pred CCCEEEEEecCCCCccchHHHHHHHHhCC--CeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC
Q 016237 7 GKRSVLLLCGDYMEDYEAMVPFQALLAFG--VSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS 84 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~e~~~~~~~l~~ag--~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (392)
+++||+|+++|||+..|+..|+++|+.++ |+++++| +++ ++.++.|+.+.++..+++ ..
T Consensus 19 ~~~kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs-~~~----------------~V~ss~G~~v~~d~~l~~--~~ 79 (236)
T 3bhn_A 19 GMYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILG-TKP----------------EHHSQLGMTVKTDGHVSE--VK 79 (236)
T ss_dssp -CEEEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEE-SSS----------------EEEBTTCCEEECSEEGGG--GG
T ss_pred CCCEEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEE-CCC----------------cEEecCCcEEecCccccc--cc
Confidence 46799999999999999999999999976 8999999 765 578889999999998887 45
Q ss_pred CccEEEEcCC-CCcccccCCHHHHHHHHHHHhCCC-eEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCC
Q 016237 85 KYDGLVIPGG-RAPEYLAMNDSVIDLVRKFSNSGK-TIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPE 162 (392)
Q Consensus 85 ~~D~iiipGG-~~~~~~~~~~~l~~~l~~~~~~~~-~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~ 162 (392)
+||+|||||| .++..+..++.+++|| ++++++ +|++||+|+++|+++|||+||++|+||...+.|++.+..+.+.
T Consensus 80 ~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~- 156 (236)
T 3bhn_A 80 EQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDL- 156 (236)
T ss_dssp GCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSS-
T ss_pred CCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCC-
Confidence 8999999999 6766577899999999 667777 9999999999999999999999999999999999866666333
Q ss_pred CcceeeecCceEecCCCCChHHHHHHHHHHhcCCcC
Q 016237 163 TMAACVVDGNIITGATYEGHPEFIRLFLKALGGTIT 198 (392)
Q Consensus 163 ~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~~ 198 (392)
.+|+|||+|||+|+.+++||++++++.+.++..
T Consensus 157 ---~vV~Dg~iiTs~G~~a~~dlal~lIe~l~G~~~ 189 (236)
T 3bhn_A 157 ---PLVIEGNIATAGGCLSLLYLVGWLAERLFDSVK 189 (236)
T ss_dssp ---SEEEETTEEEECSGGGHHHHHHHHHHHHSCHHH
T ss_pred ---cEEEeCCEEECCCHHHHHHHHHHHHHHhcCHHH
Confidence 389999999999999999999999999988863
No 42
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.97 E-value=6.8e-32 Score=261.21 Aligned_cols=190 Identities=58% Similarity=1.085 Sum_probs=167.3
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
++||+|+++|||+..|+..|+++|+++|++++++|++++++..+..++.+..+.+.+.++.|..+.++..++++++.+||
T Consensus 205 ~~ki~ill~dg~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 284 (396)
T 3uk7_A 205 NKRILFLCGDYMEDYEVKVPFQSLQALGCQVDAVCPEKKAGDRCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYD 284 (396)
T ss_dssp CCEEEEECCTTEEHHHHHHHHHHHHHHTCEEEEECTTCCTTCEECEEEEECCSSSSCEEEECCCEECCSCGGGCCGGGCS
T ss_pred cceEEEEecCCCcchhHHHHHHHHHHCCCEEEEECCCCCCCcccccccccccccchhhhcCCceeeccCCHHHCCcccCC
Confidence 57999999999999999999999999999999999998764433333333344446778899999999999999888999
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEcCCCccee
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAAC 167 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~~~ 167 (392)
+|+||||.++..+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.++..+..|++.+....+
T Consensus 285 ~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (396)
T 3uk7_A 285 ALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAAAGVLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDRC 364 (396)
T ss_dssp EEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSSTTCE
T ss_pred EEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHHcCCcCCCEEecCccHHHHHHHCCCEEEcCCCceeE
Confidence 99999998776678899999999999999999999999999999999999999999999999998888888876521128
Q ss_pred eecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 168 VVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 168 v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
|.|||+|||+|+.++.||++++++.+.++.
T Consensus 365 v~Dg~iiTs~g~~~~~d~~l~li~~l~~~~ 394 (396)
T 3uk7_A 365 FTDGNLVTGAAWPGHPEFVSQLMALLGIQV 394 (396)
T ss_dssp EEETTEEEESSGGGHHHHHHHHHHHHTCEE
T ss_pred EEcCCEEECCCchhHHHHHHHHHHHhcccc
Confidence 999999999999999999999999998754
No 43
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.97 E-value=1.4e-31 Score=239.00 Aligned_cols=182 Identities=25% Similarity=0.388 Sum_probs=152.0
Q ss_pred CCccEEEEeC----------CCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCC-----Cc
Q 016237 200 SDKRILFLCG----------DYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPG-----HN 264 (392)
Q Consensus 200 ~~~~v~ill~----------~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~ 264 (392)
|+++|+++++ +|++..|+..|+++|+++||+++++|+++++......++. ....+ ..
T Consensus 4 m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~~v~~~~~~~~--------~~~~~~~~~~~~ 75 (224)
T 1u9c_A 4 MSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGGEVPLDPRSIN--------EKDPSWAEAEAA 75 (224)
T ss_dssp CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCBCCCBCGGGSS--------SCCGGGHHHHHH
T ss_pred CCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCCccccCccccc--------cHHHHHhhhhHh
Confidence 4579999999 9999999999999999999999999999876321110000 00012 45
Q ss_pred ccccccccCCCCCCcCEEEEcCCCChh-hccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcC------CCCCceeecC
Q 016237 265 FTLTANFESVDVSGYDALVVPGGRAPE-YLALNENVIALVKDFMEAKKPVASICHGQQILAAAG------VLKGKKCTAY 337 (392)
Q Consensus 265 i~~~~~~~~~~~~~~D~viipgg~~~~-~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ag------lL~g~~~T~~ 337 (392)
+.++..+++++..+||+||||||++.. .+..++.+.+||+++++++|+|++||+|+++|+++| ||+||++|+|
T Consensus 76 i~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La~ag~~~g~~lL~Gr~~T~~ 155 (224)
T 1u9c_A 76 LKHTARLSKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNATYKDGTPIVKGKTVTSF 155 (224)
T ss_dssp TTSBEECCGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTSCBTTTTCEECCS
T ss_pred hcCCCChHHcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHHHccccCCCceecCcEEecC
Confidence 777888888777789999999999864 478899999999999999999999999999999999 9999999999
Q ss_pred chhHH---------------HHHHcCCeeeCCCCC-ceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 338 PAVKL---------------NVLLAGASWLEPDPI-DRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 338 ~~~~~---------------~~~~~~~~~~~~~~~-~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
|...+ .++..++++.+..++ ..+|.|||+|||+|+.++.+|++++|+++.|+
T Consensus 156 ~~~~~~~~~~~~~~p~~~~~~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~ 223 (224)
T 1u9c_A 156 TDEEEREVGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEER 223 (224)
T ss_dssp CHHHHHHHTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTT
T ss_pred CCHHHhhccccccCCccHHHHHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhcc
Confidence 98665 356678888766422 25999999999999999999999999999875
No 44
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.97 E-value=1.1e-31 Score=240.93 Aligned_cols=187 Identities=22% Similarity=0.323 Sum_probs=149.7
Q ss_pred CCEEEEEecC------------CCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCC--CC--cccccc---cc
Q 016237 8 KRSVLLLCGD------------YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQS--TG--HQTYSE---TR 68 (392)
Q Consensus 8 ~~kI~ill~~------------g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~--~~--~~~~~~---~~ 68 (392)
|+||+|++.+ ||+..|+..|+++|+++|++|+++|+.+++ ..+..++... .+ .+.+.. ..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~~-~~d~~s~~~~~~~~~~~~~~~~~~~~~ 87 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGTF-GWDEHSLTQEYLSKEDEKVLHSEHNHF 87 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSCC-CBCSGGGSGGGCCHHHHHHHTCSSCHH
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCCc-ccCcccccccccCHHHHHHHHhhhHHH
Confidence 5799999986 788999999999999999999999998754 1111111100 00 001111 12
Q ss_pred cCcccc-CcCcCCCCCCCccEEEEcCCCCc-ccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC------cccCCee
Q 016237 69 GHNFAL-NATFDEIDPSKYDGLVIPGGRAP-EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA------DVVKGRK 140 (392)
Q Consensus 69 g~~~~~-~~~~~~~~~~~~D~iiipGG~~~-~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a------gll~g~~ 140 (392)
+..+.+ +..++++++.+||+||||||+++ ..+..++.+++||+++++++|+|++||+|+++|+++ |||+||+
T Consensus 88 ~~~l~~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~a~~~~g~gll~G~~ 167 (247)
T 3n7t_A 88 MEKMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGIHDENGDSVIKDKT 167 (247)
T ss_dssp HHHHHHCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGCBCTTSSBTTTTCE
T ss_pred HHHHhccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHhhcccCCccccCce
Confidence 334666 88899999999999999999987 457899999999999999999999999999999999 9999999
Q ss_pred EecCCCcHH-------------------HHHHCCCeEEcC--CCcceeeecCceEecCCCCChHHHHHHHHHHhcC
Q 016237 141 CTAYPPVKP-------------------VLIAAGASWIEP--ETMAACVVDGNIITGATYEGHPEFIRLFLKALGG 195 (392)
Q Consensus 141 ~T~~~~~~~-------------------~l~~~~~~~~~~--~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~ 195 (392)
+|+||..++ .|++.|+.|++. +.+..+|+|||+|||+|+.++.++++++++.|..
T Consensus 168 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~ 243 (247)
T 3n7t_A 168 VTGFTTKGEIMIKVIDKMREDHLHTIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEG 243 (247)
T ss_dssp ECCCCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHhhhhhhhhccccchhhHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhh
Confidence 999998743 356678999874 1123499999999999999999999999998864
No 45
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=9.1e-32 Score=230.95 Aligned_cols=159 Identities=19% Similarity=0.345 Sum_probs=140.3
Q ss_pred CEEEEEecC---C---CCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCC-
Q 016237 9 RSVLLLCGD---Y---MEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEI- 81 (392)
Q Consensus 9 ~kI~ill~~---g---~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~- 81 (392)
+||+|+++| | |+..|+.. +++|+++++|++++. ++.++.|+++.++..++++
T Consensus 3 ~~v~ill~~~~~g~~~~~~~e~~~------~~~~~v~~vs~~~~~---------------~v~~~~g~~v~~d~~~~~~~ 61 (175)
T 3cne_A 3 KKVAVLAVNPVNGCGLFQYLEAFF------ENGISYKVFAVSDTK---------------EIKTNSGMVLIVDDVIANLK 61 (175)
T ss_dssp CEEEEEECSSBCHHHHHHHHHHHH------HTTCEEEEEESSSSS---------------EEEBTTSCEEECSEEGGGGT
T ss_pred cEEEEEEecCcCCCccchhhheee------eCCCEEEEEECCCCC---------------ceecCCCeEEEeccCHHHhc
Confidence 699999999 8 77766665 789999999998532 5888899999999999987
Q ss_pred -CCCCccEEEEcCC--C-Cccccc---CCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHC
Q 016237 82 -DPSKYDGLVIPGG--R-APEYLA---MNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAA 154 (392)
Q Consensus 82 -~~~~~D~iiipGG--~-~~~~~~---~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~ 154 (392)
++.+||+|+|||| . ++..+. .++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++
T Consensus 62 ~~~~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~G~~~T~~~~~~~~l~~- 140 (175)
T 3cne_A 62 GHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFTGITKGKKVAVHPLAKPAIQN- 140 (175)
T ss_dssp TCGGGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTTTTTCEEECCGGGGGGCCS-
T ss_pred cCcccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCEEEeCccHHHHhhc-
Confidence 6779999999999 6 665555 7889999999999999999999999999999999999999999999888876
Q ss_pred CCeEEcCCCcceeeecCceEecCCCCChHHHHHHHHHHhc
Q 016237 155 GASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALG 194 (392)
Q Consensus 155 ~~~~~~~~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~ 194 (392)
..+.+.. +|.|||+|||+|+.+++||++++++.+.
T Consensus 141 -~~~~~~~----~v~Dg~iiTs~g~~~~~d~al~li~~l~ 175 (175)
T 3cne_A 141 -GIATDEK----SEIDGNFFTAQDENTIWTMLPKVIEALK 175 (175)
T ss_dssp -SEEESSS----EEEETTEEEESSGGGGGGTHHHHHHHHC
T ss_pred -CEEeCCC----EEEeCCEEeCCChHHHHHHHHHHHHHhC
Confidence 5665433 8999999999999999999999999863
No 46
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.97 E-value=3.8e-31 Score=244.03 Aligned_cols=188 Identities=17% Similarity=0.229 Sum_probs=152.7
Q ss_pred CCEEEEEecC--------------CCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccc---cC
Q 016237 8 KRSVLLLCGD--------------YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETR---GH 70 (392)
Q Consensus 8 ~~kI~ill~~--------------g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~---g~ 70 (392)
+|||+|++.+ ||+..|+..|+++|+++||+|+++|+++++...+.+++... ...+.+.. |.
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~~v~~d~~s~~~~--~~~~~~~~~~~g~ 125 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHK--DEKVMPFFEQHKS 125 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSCCCCBCGGGCCTT--CTTHHHHHHHHHH
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccc--cHHHHHHHHhccc
Confidence 4799999985 79999999999999999999999999987643333332110 11122222 77
Q ss_pred ccccCcCcCCC-----CCCCccEEEEcCCCCcc-cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCc----ccCCee
Q 016237 71 NFALNATFDEI-----DPSKYDGLVIPGGRAPE-YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD----VVKGRK 140 (392)
Q Consensus 71 ~~~~~~~~~~~-----~~~~~D~iiipGG~~~~-~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ag----ll~g~~ 140 (392)
.+.++..++++ ++.+||+||||||+++. .+..++.+++||+++++++++|++||+|+++|+.++ ||+||+
T Consensus 126 ~l~~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a~~~~GLL~Gr~ 205 (291)
T 1n57_A 126 LFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYS 205 (291)
T ss_dssp HHHSCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGGTTSCCTTTTCE
T ss_pred eecCCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhhcccCccCCCCE
Confidence 88888888874 56789999999999877 578899999999999999999999999999998874 999999
Q ss_pred EecCCCcHHHH-------------------HHCCCeEEcCCCcceeeecCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 141 CTAYPPVKPVL-------------------IAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 141 ~T~~~~~~~~l-------------------~~~~~~~~~~~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+|+||...+.+ ++.++.+.+.+.+..+|+|||+|||+|+.++++|++++++.+.++.
T Consensus 206 ~Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~ 281 (291)
T 1n57_A 206 ICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAY 281 (291)
T ss_dssp ECCCCGGGGGTTTTTTSSSSCCSSCHHHHHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHhhhccccccccccchhHHHHHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCch
Confidence 99999987654 3446777732222349999999999999999999999999988765
No 47
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=99.97 E-value=6.3e-31 Score=234.91 Aligned_cols=165 Identities=19% Similarity=0.217 Sum_probs=148.2
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcC--CeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCC
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALE--CHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVS 277 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~--~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 277 (392)
+++++.++++++++..|+..|+++|+.++ |+++++| ++++ +.++.|..+.++..+++ ..
T Consensus 19 ~~~kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs-~~~~----------------V~ss~G~~v~~d~~l~~--~~ 79 (236)
T 3bhn_A 19 GMYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILG-TKPE----------------HHSQLGMTVKTDGHVSE--VK 79 (236)
T ss_dssp -CEEEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEE-SSSE----------------EEBTTCCEEECSEEGGG--GG
T ss_pred CCCEEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEE-CCCc----------------EEecCCcEEecCccccc--cc
Confidence 46789999999999999999999999876 8999999 7664 67788888999988887 45
Q ss_pred CcCEEEEcCC-CChhhccCChHHHHHHHHHHHcCC-cEEEEehHHHHHHHcCCCCCceeecCchhHHHHHHcCCeeeCCC
Q 016237 278 GYDALVVPGG-RAPEYLALNENVIALVKDFMEAKK-PVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLLAGASWLEPD 355 (392)
Q Consensus 278 ~~D~viipgg-~~~~~~~~~~~l~~~l~~~~~~g~-~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~~~~~~~~~~ 355 (392)
+||+|||||| .++..+..++.+.+|| ++++++ +|+++|+|+++|+++|||+||++||||...+.++..+.++.+.
T Consensus 80 ~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~- 156 (236)
T 3bhn_A 80 EQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDL- 156 (236)
T ss_dssp GCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSS-
T ss_pred CCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCC-
Confidence 8999999999 6776678899999999 677777 9999999999999999999999999999999999888888543
Q ss_pred CCceEEEcCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 356 PIDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 356 ~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
.+|.|||+|||+|+.++.||++++|+++.|+
T Consensus 157 ---~vV~Dg~iiTs~G~~a~~dlal~lIe~l~G~ 187 (236)
T 3bhn_A 157 ---PLVIEGNIATAGGCLSLLYLVGWLAERLFDS 187 (236)
T ss_dssp ---SEEEETTEEEECSGGGHHHHHHHHHHHHSCH
T ss_pred ---cEEEeCCEEECCCHHHHHHHHHHHHHHhcCH
Confidence 5999999999999999999999999999875
No 48
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.97 E-value=2.6e-30 Score=232.10 Aligned_cols=190 Identities=18% Similarity=0.255 Sum_probs=151.5
Q ss_pred CccEEEEeCC------------CCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccC-CCCC---ccccCC---C
Q 016237 201 DKRILFLCGD------------YMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHD-FEGD---QTYSEK---P 261 (392)
Q Consensus 201 ~~~v~ill~~------------~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~-~~~~---~~~~~~---~ 261 (392)
|+||++++.+ |++..|+..|+++|+++|++|+++|+.|+. ..++.+... +.++ ...... .
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~~-~~d~~s~~~~~~~~~~~~~~~~~~~~~ 87 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGTF-GWDEHSLTQEYLSKEDEKVLHSEHNHF 87 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSCC-CBCSGGGSGGGCCHHHHHHHTCSSCHH
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCCc-ccCcccccccccCHHHHHHHHhhhHHH
Confidence 5789999876 778999999999999999999999998875 222222110 0000 001111 1
Q ss_pred CCcccc-cccccCCCCCCcCEEEEcCCCCh-hhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc------CCCCCce
Q 016237 262 GHNFTL-TANFESVDVSGYDALVVPGGRAP-EYLALNENVIALVKDFMEAKKPVASICHGQQILAAA------GVLKGKK 333 (392)
Q Consensus 262 g~~i~~-~~~~~~~~~~~~D~viipgg~~~-~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a------glL~g~~ 333 (392)
+..+.. +..+++++..+||+||||||+++ ..++.++.+.+||+++++++|+|++||+|+++|+++ |||+||+
T Consensus 88 ~~~l~~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~a~~~~g~gll~G~~ 167 (247)
T 3n7t_A 88 MEKMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGIHDENGDSVIKDKT 167 (247)
T ss_dssp HHHHHHCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGCBCTTSSBTTTTCE
T ss_pred HHHHhccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHhhcccCCccccCce
Confidence 223555 77899998899999999999997 458899999999999999999999999999999999 9999999
Q ss_pred eecCchhHH-------------------HHHHcCCeeeCC-CCC-ceEEEcCCeEEccCCCChHHHHHHHHHHhccccc
Q 016237 334 CTAYPAVKL-------------------NVLLAGASWLEP-DPI-DRCFTDGNLVSGAAWPGHPEFISQLMALLGIQVL 391 (392)
Q Consensus 334 ~T~~~~~~~-------------------~~~~~~~~~~~~-~~~-~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~~~ 391 (392)
+|+||..++ .+++.|++|.+. .++ ..+|.|||+|||+|+.++.+|++++|+.|...++
T Consensus 168 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~~~~ 246 (247)
T 3n7t_A 168 VTGFTTKGEIMIKVIDKMREDHLHTIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEGIVN 246 (247)
T ss_dssp ECCCCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHHHHT
T ss_pred ecCCCcHHHhhhhhhhhccccchhhHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhhhcc
Confidence 999999754 355689999874 112 2699999999999999999999999999987543
No 49
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.97 E-value=1.8e-30 Score=233.05 Aligned_cols=187 Identities=19% Similarity=0.241 Sum_probs=149.3
Q ss_pred CccEEEEeCC------------CCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCC----CCCcccc---CCC
Q 016237 201 DKRILFLCGD------------YMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDF----EGDQTYS---EKP 261 (392)
Q Consensus 201 ~~~v~ill~~------------~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~----~~~~~~~---~~~ 261 (392)
|+||++++.+ |++..|+..|+++|+++|++|+++|+.|++ ..++.+.... ....... ++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~~-~~d~~s~~~~~~~~~~~~~~~~~~~~~ 81 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGF-GWDEHYLPKSFIGGEDKMNFETKNSAF 81 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSCC-CBCTTC--------------------C
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCCC-CcCCccccccccCHHHHHHHHHhhHHH
Confidence 6788888863 777899999999999999999999999775 2332221100 0111111 123
Q ss_pred CCcccccccccCCCCCCcCEEEEcCCCCh-hhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc-------CCCCCce
Q 016237 262 GHNFTLTANFESVDVSGYDALVVPGGRAP-EYLALNENVIALVKDFMEAKKPVASICHGQQILAAA-------GVLKGKK 333 (392)
Q Consensus 262 g~~i~~~~~~~~~~~~~~D~viipgg~~~-~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a-------glL~g~~ 333 (392)
+..+..+..+++++..+||+||||||+++ ..+..++.+.+||+++++++|+|++||+|+++|+++ |||+||+
T Consensus 82 ~~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a~~~~~g~gll~G~~ 161 (244)
T 3kkl_A 82 NKALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKA 161 (244)
T ss_dssp HHHHHTCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCE
T ss_pred HHHhcCCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhhccccCCceeCCce
Confidence 45678888999998889999999999986 458899999999999999999999999999999999 9999999
Q ss_pred eecCchhHH-------------------HHHHcCCeeeCC-CCC-ceEEEcCCeEEccCCCChHHHHHHHHHHhcc
Q 016237 334 CTAYPAVKL-------------------NVLLAGASWLEP-DPI-DRCFTDGNLVSGAAWPGHPEFISQLMALLGI 388 (392)
Q Consensus 334 ~T~~~~~~~-------------------~~~~~~~~~~~~-~~~-~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~ 388 (392)
+|+||..++ .++..|++|.+. .++ ..+|.|||+|||+|+.++.+|++++|++|..
T Consensus 162 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~ 237 (244)
T 3kkl_A 162 ITGFPLEGEIALGVDDILRSRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS 237 (244)
T ss_dssp ECCSCHHHHHHHTTHHHHHHTTCCCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC
T ss_pred ecCCCcHHHHhhhhhhhccccccccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhh
Confidence 999999754 345678999873 122 2699999999999999999999999999864
No 50
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.97 E-value=1.8e-30 Score=234.24 Aligned_cols=187 Identities=19% Similarity=0.278 Sum_probs=147.2
Q ss_pred CccEEEEeC------------CCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccC-CCCC---ccc---cCCC
Q 016237 201 DKRILFLCG------------DYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHD-FEGD---QTY---SEKP 261 (392)
Q Consensus 201 ~~~v~ill~------------~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~-~~~~---~~~---~~~~ 261 (392)
|+||++++. +|++..|+..|+++|+++||+|+++|+++++ ..++.++.. +... ... .+..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~~-~~d~~s~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKF-GWDEHSLAKDFLNGQDETDFKNKDSDF 81 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSCC-CBCGGGGSTTTSCHHHHHHHHCTTSHH
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCCC-CcCcccccccccChHHHHHHHhhhHHH
Confidence 578999886 5778899999999999999999999999873 222222110 0000 000 0012
Q ss_pred CCcccccccccCCCCCCcCEEEEcCCCChh-hccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcC-------CCCCce
Q 016237 262 GHNFTLTANFESVDVSGYDALVVPGGRAPE-YLALNENVIALVKDFMEAKKPVASICHGQQILAAAG-------VLKGKK 333 (392)
Q Consensus 262 g~~i~~~~~~~~~~~~~~D~viipgg~~~~-~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ag-------lL~g~~ 333 (392)
+..+.++..+++++.++||+||||||+++. .+..++.+.+||+++++++|+|++||+|+++|+++| ||+||+
T Consensus 82 g~~l~~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~ag~~~~g~~lL~G~~ 161 (243)
T 1rw7_A 82 NKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKS 161 (243)
T ss_dssp HHHHHTCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCE
T ss_pred HhhhccCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHHhcCcccCCceeeCCcE
Confidence 445677888898877899999999999864 478899999999999999999999999999999999 999999
Q ss_pred eecCchhHHH-------------------HHHcCCeeeCCC-CC-ceEEEcCCeEEccCCCChHHHHHHHHHHhcc
Q 016237 334 CTAYPAVKLN-------------------VLLAGASWLEPD-PI-DRCFTDGNLVSGAAWPGHPEFISQLMALLGI 388 (392)
Q Consensus 334 ~T~~~~~~~~-------------------~~~~~~~~~~~~-~~-~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~ 388 (392)
+|+||..++. +++.++++.+.+ ++ ..+|.|||+|||+|+.++.+|++++|+++..
T Consensus 162 ~T~~~~~~e~~~~~~~~~p~~~~~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 162 ITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp ECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred EeecCCHHHhhccccccccccccccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 9999997665 444589998420 00 2699999999999999999999999998853
No 51
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=9.2e-31 Score=224.66 Aligned_cols=161 Identities=17% Similarity=0.228 Sum_probs=139.8
Q ss_pred CCccEEEEeCC---C---CCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccC
Q 016237 200 SDKRILFLCGD---Y---MEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFES 273 (392)
Q Consensus 200 ~~~~v~ill~~---~---~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~ 273 (392)
|.+++.+++++ + ++..|+.. +++|+++++|++++. .++++.|..+.++..+++
T Consensus 1 m~~~v~ill~~~~~g~~~~~~~e~~~------~~~~~v~~vs~~~~~---------------~v~~~~g~~v~~d~~~~~ 59 (175)
T 3cne_A 1 MAKKVAVLAVNPVNGCGLFQYLEAFF------ENGISYKVFAVSDTK---------------EIKTNSGMVLIVDDVIAN 59 (175)
T ss_dssp -CCEEEEEECSSBCHHHHHHHHHHHH------HTTCEEEEEESSSSS---------------EEEBTTSCEEECSEEGGG
T ss_pred CCcEEEEEEecCcCCCccchhhheee------eCCCEEEEEECCCCC---------------ceecCCCeEEEeccCHHH
Confidence 35789999999 8 66555544 789999999998531 267788999999999988
Q ss_pred C--CCCCcCEEEEcCC--C-Chhhcc---CChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHH
Q 016237 274 V--DVSGYDALVVPGG--R-APEYLA---LNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVL 345 (392)
Q Consensus 274 ~--~~~~~D~viipgg--~-~~~~~~---~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~ 345 (392)
. ++++||+|||||| . ++..+. .++.+.+||+++++++|+|+++|+|+++|+++|||+||++|+||...+.++
T Consensus 60 ~~~~~~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~G~~~T~~~~~~~~l~ 139 (175)
T 3cne_A 60 LKGHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFTGITKGKKVAVHPLAKPAIQ 139 (175)
T ss_dssp GTTCGGGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTTTTTCEEECCGGGGGGCC
T ss_pred hccCcccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCEEEeCccHHHHhh
Confidence 7 6679999999999 6 665555 789999999999999999999999999999999999999999999988887
Q ss_pred HcCCeeeCCCCCceEEEcCCeEEccCCCChHHHHHHHHHHhc
Q 016237 346 LAGASWLEPDPIDRCFTDGNLVSGAAWPGHPEFISQLMALLG 387 (392)
Q Consensus 346 ~~~~~~~~~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~ 387 (392)
. +++.+. .+|.|||+|||+|+.++.||+++++++|.
T Consensus 140 ~--~~~~~~----~~v~Dg~iiTs~g~~~~~d~al~li~~l~ 175 (175)
T 3cne_A 140 N--GIATDE----KSEIDGNFFTAQDENTIWTMLPKVIEALK 175 (175)
T ss_dssp S--SEEESS----SEEEETTEEEESSGGGGGGTHHHHHHHHC
T ss_pred c--CEEeCC----CEEEeCCEEeCCChHHHHHHHHHHHHHhC
Confidence 6 778754 49999999999999999999999999873
No 52
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.96 E-value=3.3e-30 Score=237.79 Aligned_cols=185 Identities=19% Similarity=0.198 Sum_probs=151.5
Q ss_pred CccEEEEeCC--------------CCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCC---CC
Q 016237 201 DKRILFLCGD--------------YMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKP---GH 263 (392)
Q Consensus 201 ~~~v~ill~~--------------~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~---g~ 263 (392)
.+||++++.+ |++..|+..|+++|+++||+|+++|+++++...++.++. ..+..+.+.. |.
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~~v~~d~~s~~--~~~~~~~~~~~~~g~ 125 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMP--HKDEKVMPFFEQHKS 125 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSCCCCBCGGGCC--TTCTTHHHHHHHHHH
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccc--cccHHHHHHHHhccc
Confidence 4689999875 699999999999999999999999999987554433321 0111111112 55
Q ss_pred cccccccccCC-----CCCCcCEEEEcCCCChh-hccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcC----CCCCce
Q 016237 264 NFTLTANFESV-----DVSGYDALVVPGGRAPE-YLALNENVIALVKDFMEAKKPVASICHGQQILAAAG----VLKGKK 333 (392)
Q Consensus 264 ~i~~~~~~~~~-----~~~~~D~viipgg~~~~-~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ag----lL~g~~ 333 (392)
.+.++..++++ +.++||+||||||+++. .++.++.+.+||+++++++|+|++||+|+++|++++ ||+||+
T Consensus 126 ~l~~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a~~~~GLL~Gr~ 205 (291)
T 1n57_A 126 LFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYS 205 (291)
T ss_dssp HHHSCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGGTTSCCTTTTCE
T ss_pred eecCCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhhcccCccCCCCE
Confidence 67777778773 56799999999999876 588899999999999999999999999999999985 999999
Q ss_pred eecCchhHHHH-------------------HHcCCeeeC---CCCCceEEEcCCeEEccCCCChHHHHHHHHHHhcccc
Q 016237 334 CTAYPAVKLNV-------------------LLAGASWLE---PDPIDRCFTDGNLVSGAAWPGHPEFISQLMALLGIQV 390 (392)
Q Consensus 334 ~T~~~~~~~~~-------------------~~~~~~~~~---~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~~~~ 390 (392)
+|+||...+.+ +..|+++.+ +. .+|+|||+|||+|+.++.+|++++|++|.+..
T Consensus 206 ~Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~~ga~~~~~~~~~---~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~ 281 (291)
T 1n57_A 206 ICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITG---RVHKDRKLLTGDSPFAANALGKLAAQEMLAAY 281 (291)
T ss_dssp ECCCCGGGGGTTTTTTSSSSCCSSCHHHHHHHTTCEECCSSCSC---CEEEETTEEEESSGGGHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHhhhccccccccccchhHHHHHHHCCCEEECCCCCC---CEEEeCCEEECCCHHHHHHHHHHHHHHHhCch
Confidence 99999987654 344888883 22 59999999999999999999999999998864
No 53
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.96 E-value=8.9e-30 Score=228.18 Aligned_cols=178 Identities=20% Similarity=0.255 Sum_probs=144.7
Q ss_pred CCEEEEEec-----CCCCccchHHHHHHHHhCCCeEEEECCCCCCCCC-CCccccCCCCcccccccccCccccC------
Q 016237 8 KRSVLLLCG-----DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDV-CPTAVHQSTGHQTYSETRGHNFALN------ 75 (392)
Q Consensus 8 ~~kI~ill~-----~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~------ 75 (392)
|+||+|+++ |||+..|+..|+++|+++||+|+++|+++++... +..+ + .++.++.|+.+.++
T Consensus 6 m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~~~~v~d~~s-----~-~~~~~~~g~~i~~~~~~~~~ 79 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLT-----G-EAMTETRNVLIEAARITRGE 79 (232)
T ss_dssp CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTT-----C-CBCSCCCBHHHHHTTTTTTC
T ss_pred CCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCCCccccccc-----c-cchhhhhhhhHHHHHhhhcC
Confidence 579999999 9999999999999999999999999998764211 1111 1 13456667777666
Q ss_pred -cCcCCCCCCCccEEEEcCCCCcc-----------cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccC-CeeEe
Q 016237 76 -ATFDEIDPSKYDGLVIPGGRAPE-----------YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVK-GRKCT 142 (392)
Q Consensus 76 -~~~~~~~~~~~D~iiipGG~~~~-----------~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~-g~~~T 142 (392)
..++++++.+||+||||||+++. .+..++.+++||+++++++++|++||+|+++|+++ |+ ||++|
T Consensus 80 ~~~l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a--L~~Gr~~T 157 (232)
T 1vhq_A 80 IRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI--FDFPLRLT 157 (232)
T ss_dssp CEEGGGCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH--CSSCCEEC
T ss_pred CCCHHHcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH--hcCCCEEe
Confidence 78888877789999999998752 12248999999999999999999999999999999 79 99999
Q ss_pred cC-C-CcHHHHHHCCCeEEcCCCcceeee-cCceEecCCCCChHHHHHHHHHHhcCCc
Q 016237 143 AY-P-PVKPVLIAAGASWIEPETMAACVV-DGNIITGATYEGHPEFIRLFLKALGGTI 197 (392)
Q Consensus 143 ~~-~-~~~~~l~~~~~~~~~~~~~~~~v~-dg~iiT~~g~~s~~~~~~~~i~~l~~~~ 197 (392)
+| | ...+.|++.|+.|++...+..+++ |||+|||+ ++++++++++.+.+..
T Consensus 158 th~~~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liTs~----~~d~al~lv~~~~G~~ 211 (232)
T 1vhq_A 158 IGTDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTP----AYMLAQNIAEAASGID 211 (232)
T ss_dssp CCSCHHHHHHHHHTTCEECCCCTTCCEEETTTTEEEEC----GGGTCSSHHHHHHHHH
T ss_pred ccCCHHHHHHHHHcCCEEecCCCCceEEecCCCEEECC----CHHHHHHHHHHHcCHH
Confidence 99 5 567888888888887532223554 59999997 8899999999988765
No 54
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.95 E-value=4.8e-29 Score=223.17 Aligned_cols=167 Identities=21% Similarity=0.241 Sum_probs=136.0
Q ss_pred CEEEEEec-----CCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccC-------c
Q 016237 9 RSVLLLCG-----DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALN-------A 76 (392)
Q Consensus 9 ~kI~ill~-----~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------~ 76 (392)
+||+|++. |||+..|+..|+++|+++|++|+++|+++++...+. ...+. ++.++.|+.+.++ .
T Consensus 24 kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~----~~~g~-~v~~s~g~~v~~d~~~~~~~~ 98 (242)
T 3l3b_A 24 LNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVD----HKKKE-SVGEVRNILVESARIARGSVY 98 (242)
T ss_dssp CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSCEEE----TTTTE-EESCCCBHHHHHHHHTTTCEE
T ss_pred CEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCcccccc----cccCc-cccccCCeEEecchhccccCC
Confidence 79999998 999999999999999999999999999886432211 01111 4566778888777 7
Q ss_pred CcCCCCCCCccEEEEcCCCCcc-c-----------ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCc-ccCCeeEec
Q 016237 77 TFDEIDPSKYDGLVIPGGRAPE-Y-----------LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD-VVKGRKCTA 143 (392)
Q Consensus 77 ~~~~~~~~~~D~iiipGG~~~~-~-----------~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ag-ll~g~~~T~ 143 (392)
+++++++.+||+||||||.+.. . +..++.+.+||+++++++|+|++||+|+++|+++| ||+||++|+
T Consensus 99 ~l~dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag~lL~Gr~~T~ 178 (242)
T 3l3b_A 99 DIEQIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALLKDIAKVKVTI 178 (242)
T ss_dssp EGGGCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHHTTTCCCEECC
T ss_pred ChHHCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhCcccCCCEEEe
Confidence 8999888899999999998642 1 25679999999999999999999999999999999 999999999
Q ss_pred CCCcHHHHHHCCCeEEcCCCcceeeec--CceEecCCCCC
Q 016237 144 YPPVKPVLIAAGASWIEPETMAACVVD--GNIITGATYEG 181 (392)
Q Consensus 144 ~~~~~~~l~~~~~~~~~~~~~~~~v~d--g~iiT~~g~~s 181 (392)
||...+.++++|+.|++.+. ..+|+| ||+|||++...
T Consensus 179 ~~~~~~~l~~~Ga~~~~~~~-~~vVvD~~g~liTs~a~~~ 217 (242)
T 3l3b_A 179 GEDSNGLIDKMGGVHVDCPT-IKSVKDDVNRIFSCSAYMR 217 (242)
T ss_dssp CC----CHHHHTCEECCCCT-TCCEEETTTTEEEECGGGS
T ss_pred cCChHHHHHHCCCEEEcCCC-CeEEEECCCCEEECcCccc
Confidence 99988888889999988531 127778 99999998754
No 55
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.95 E-value=1.4e-28 Score=220.09 Aligned_cols=170 Identities=17% Similarity=0.204 Sum_probs=136.8
Q ss_pred CCCccEEEEeC-----CCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCccccc-----
Q 016237 199 GSDKRILFLCG-----DYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLT----- 268 (392)
Q Consensus 199 ~~~~~v~ill~-----~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~----- 268 (392)
.|+++|++++. ++++..|+..|+++|+++||+|+++|+++++.+.++. ..+..+.++.|..+.++
T Consensus 21 ~M~kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~-----~~g~~v~~s~g~~v~~d~~~~~ 95 (242)
T 3l3b_A 21 SMALNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVDH-----KKKESVGEVRNILVESARIARG 95 (242)
T ss_dssp ---CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSCEEET-----TTTEEESCCCBHHHHHHHHTTT
T ss_pred cccCEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCccccccc-----ccCccccccCCeEEecchhccc
Confidence 35589999998 9999999999999999999999999999886443221 22334566667777766
Q ss_pred --ccccCCCCCCcCEEEEcCCCChh-h-----------ccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcC-CCCCce
Q 016237 269 --ANFESVDVSGYDALVVPGGRAPE-Y-----------LALNENVIALVKDFMEAKKPVASICHGQQILAAAG-VLKGKK 333 (392)
Q Consensus 269 --~~~~~~~~~~~D~viipgg~~~~-~-----------~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ag-lL~g~~ 333 (392)
..++++++++||+||||||++.. . +..++.+.+||+++++++|+|++||+|+++|+++| ||+||+
T Consensus 96 ~~~~l~dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag~lL~Gr~ 175 (242)
T 3l3b_A 96 SVYDIEQIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALLKDIAKVK 175 (242)
T ss_dssp CEEEGGGCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHHTTTCCCE
T ss_pred cCCChHHCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhCcccCCCE
Confidence 67888888899999999998742 1 25689999999999999999999999999999999 999999
Q ss_pred eecCchhHHHHHHcCCeeeCCCCCceEEEc--CCeEEccCCCC
Q 016237 334 CTAYPAVKLNVLLAGASWLEPDPIDRCFTD--GNLVSGAAWPG 374 (392)
Q Consensus 334 ~T~~~~~~~~~~~~~~~~~~~~~~~~vv~d--g~lvT~~g~~~ 374 (392)
+|+||.....+++.|++|++... ..+|.| ||+|||+++..
T Consensus 176 ~T~~~~~~~~l~~~Ga~~~~~~~-~~vVvD~~g~liTs~a~~~ 217 (242)
T 3l3b_A 176 VTIGEDSNGLIDKMGGVHVDCPT-IKSVKDDVNRIFSCSAYMR 217 (242)
T ss_dssp ECCCC----CHHHHTCEECCCCT-TCCEEETTTTEEEECGGGS
T ss_pred EEecCChHHHHHHCCCEEEcCCC-CeEEEECCCCEEECcCccc
Confidence 99999988888888999987421 147888 99999998753
No 56
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.95 E-value=6.6e-28 Score=216.01 Aligned_cols=178 Identities=17% Similarity=0.193 Sum_probs=143.6
Q ss_pred CCccEEEEeC-----CCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCC-CCCcccCCCCCccccCCCCCccccc-----
Q 016237 200 SDKRILFLCG-----DYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDS-CPTAVHDFEGDQTYSEKPGHNFTLT----- 268 (392)
Q Consensus 200 ~~~~v~ill~-----~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~i~~~----- 268 (392)
.|++++++++ ++++..|+..|+++|+++||+++++|+++++.+. ++.+ +..+.+..|..+.++
T Consensus 5 ~m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~~~~v~d~~s------~~~~~~~~g~~i~~~~~~~~ 78 (232)
T 1vhq_A 5 TMKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLT------GEAMTETRNVLIEAARITRG 78 (232)
T ss_dssp -CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTT------CCBCSCCCBHHHHHTTTTTT
T ss_pred cCCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCCCccccccc------ccchhhhhhhhHHHHHhhhc
Confidence 3678999999 9999999999999999999999999999875321 1111 123355566666666
Q ss_pred --ccccCCCCCCcCEEEEcCCCChh-hc----------cCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCC-Ccee
Q 016237 269 --ANFESVDVSGYDALVVPGGRAPE-YL----------ALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLK-GKKC 334 (392)
Q Consensus 269 --~~~~~~~~~~~D~viipgg~~~~-~~----------~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~-g~~~ 334 (392)
..+++++.++||+||||||+++. .+ ..++.+.+||++++++||+|++||+|+++|+++ |+ ||++
T Consensus 79 ~~~~l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a--L~~Gr~~ 156 (232)
T 1vhq_A 79 EIRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI--FDFPLRL 156 (232)
T ss_dssp CCEEGGGCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH--CSSCCEE
T ss_pred CCCCHHHcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH--hcCCCEE
Confidence 77888777789999999998752 12 258999999999999999999999999999999 79 9999
Q ss_pred ecC-c-hhHHHHHHcCCeeeCCCCCceEEE-cCCeEEccCCCChHHHHHHHHHHhccc
Q 016237 335 TAY-P-AVKLNVLLAGASWLEPDPIDRCFT-DGNLVSGAAWPGHPEFISQLMALLGIQ 389 (392)
Q Consensus 335 T~~-~-~~~~~~~~~~~~~~~~~~~~~vv~-dg~lvT~~g~~~~~~~~~~li~~l~~~ 389 (392)
|+| | ..++.++..|+++.+..+...+++ |||+|||+ +.||++++|+++.|.
T Consensus 157 Tth~~~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liTs~----~~d~al~lv~~~~G~ 210 (232)
T 1vhq_A 157 TIGTDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTP----AYMLAQNIAEAASGI 210 (232)
T ss_dssp CCCSCHHHHHHHHHTTCEECCCCTTCCEEETTTTEEEEC----GGGTCSSHHHHHHHH
T ss_pred eccCCHHHHHHHHHcCCEEecCCCCceEEecCCCEEECC----CHHHHHHHHHHHcCH
Confidence 999 4 778888888899887521112444 59999997 788999999999876
No 57
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.85 E-value=8.2e-22 Score=199.25 Aligned_cols=152 Identities=17% Similarity=0.228 Sum_probs=132.5
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
++||+||++||++..|+..|+++|+++|++++++|++++ .+.++.|..+.++..++++++.+||
T Consensus 534 ~rkVaILl~dGfe~~El~~p~dvL~~AG~~V~ivS~~gg----------------~V~ss~G~~v~~d~~l~~v~~~~yD 597 (715)
T 1sy7_A 534 SRRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRS----------------KVTAANGSTVQPHHHLEGFRSTMVD 597 (715)
T ss_dssp TCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSS----------------CEEBTTSCEECCSEETTTCCGGGSS
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEEECCCC----------------ceecCCCceEecccccccCCcccCC
Confidence 579999999999999999999999999999999999876 4778889999999999998878999
Q ss_pred EEEEcCCC-CcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC-cccCCeeEecCCCcHHHHHHCCCeEEcCCCcc
Q 016237 88 GLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA-DVVKGRKCTAYPPVKPVLIAAGASWIEPETMA 165 (392)
Q Consensus 88 ~iiipGG~-~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a-gll~g~~~T~~~~~~~~l~~~~~~~~~~~~~~ 165 (392)
+||||||. ++..+..++.+++||+++++++|+|++||+|+++|+++ ||.+- ++.++ .
T Consensus 598 aViVPGG~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlGL~~L-------------~~aGa-----~--- 656 (715)
T 1sy7_A 598 AIFIPGGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIALPQV-------------TVSSE-----A--- 656 (715)
T ss_dssp EEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHCCTTS-------------CCCCS-----S---
T ss_pred EEEEcCCcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccCcHhH-------------HhcCC-----C---
Confidence 99999996 45557789999999999999999999999999999999 98322 22232 2
Q ss_pred eeeecCceEecCCCC------------ChHHHHHHHHHHhcCC
Q 016237 166 ACVVDGNIITGATYE------------GHPEFIRLFLKALGGT 196 (392)
Q Consensus 166 ~~v~dg~iiT~~g~~------------s~~~~~~~~i~~l~~~ 196 (392)
.+|+|||+||++|+. +..+++..+++.+...
T Consensus 657 ~VVvDg~lITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~~h 699 (715)
T 1sy7_A 657 EVHESYGVVTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIAQH 699 (715)
T ss_dssp SCEEETTEEEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHHTC
T ss_pred cEEEeCCEEECCCCcccccccccccccCHHHHHHHHHHHHHcC
Confidence 288999999999986 6778999999888653
No 58
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.82 E-value=2.5e-20 Score=188.49 Aligned_cols=151 Identities=14% Similarity=0.263 Sum_probs=130.9
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
.++|+|+++++++..|+..++++|+.+||+++++|+++++ +.++.|..+.++..+++++..+||
T Consensus 534 ~rkVaILl~dGfe~~El~~p~dvL~~AG~~V~ivS~~gg~----------------V~ss~G~~v~~d~~l~~v~~~~yD 597 (715)
T 1sy7_A 534 SRRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRSK----------------VTAANGSTVQPHHHLEGFRSTMVD 597 (715)
T ss_dssp TCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSSC----------------EEBTTSCEECCSEETTTCCGGGSS
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEEECCCCc----------------eecCCCceEecccccccCCcccCC
Confidence 4689999999999999999999999999999999999875 667788889999999988777999
Q ss_pred EEEEcCCC-ChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc-CCCCCceeecCchhHHHHHHcCCeeeCCCCCc
Q 016237 281 ALVVPGGR-APEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA-GVLKGKKCTAYPAVKLNVLLAGASWLEPDPID 358 (392)
Q Consensus 281 ~viipgg~-~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a-glL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~ 358 (392)
+||||||. +...+..++.+++||+++++++|+|++||+|+++|+++ ||.+-+ +.++ .
T Consensus 598 aViVPGG~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlGL~~L~-------------~aGa-----~--- 656 (715)
T 1sy7_A 598 AIFIPGGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIALPQVT-------------VSSE-----A--- 656 (715)
T ss_dssp EEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHCCTTSC-------------CCCS-----S---
T ss_pred EEEEcCCcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccCcHhHH-------------hcCC-----C---
Confidence 99999996 45567889999999999999999999999999999999 984322 2222 2
Q ss_pred eEEEcCCeEEccCCC------------ChHHHHHHHHHHhcc
Q 016237 359 RCFTDGNLVSGAAWP------------GHPEFISQLMALLGI 388 (392)
Q Consensus 359 ~vv~dg~lvT~~g~~------------~~~~~~~~li~~l~~ 388 (392)
.+|.||++||++|+. +..+++.++++.|..
T Consensus 657 ~VVvDg~lITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~~ 698 (715)
T 1sy7_A 657 EVHESYGVVTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIAQ 698 (715)
T ss_dssp SCEEETTEEEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHHT
T ss_pred cEEEeCCEEECCCCcccccccccccccCHHHHHHHHHHHHHc
Confidence 489999999999985 677899999988753
No 59
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.77 E-value=9.6e-19 Score=175.00 Aligned_cols=113 Identities=19% Similarity=0.192 Sum_probs=107.1
Q ss_pred CCCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCc
Q 016237 7 GKRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKY 86 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 86 (392)
.+|||+||+.|||+..|+..++++|+++|++|+++|++++ .+.++.|..+.+|.+++++++.+|
T Consensus 599 ~grKVaILlaDGfEe~El~~pvdaLr~AG~~V~vVS~~~g----------------~V~gs~G~~V~aD~t~~~v~s~~f 662 (753)
T 3ttv_A 599 KGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMG----------------EVTADDGTVLPIAATFAGAPSLTV 662 (753)
T ss_dssp TTCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSS----------------EEECTTSCEEECCEETTTSCGGGC
T ss_pred CCCEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEEcCCC----------------eEEeCCCCEEecccchhhCCCcCC
Confidence 3689999999999999999999999999999999999876 588899999999999999998899
Q ss_pred cEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCccc
Q 016237 87 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVV 136 (392)
Q Consensus 87 D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll 136 (392)
|+|||||| ++..+..++.+++||+++++++|+|++||+|+++|+++||-
T Consensus 663 DALVVPGG-g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa~AGL~ 711 (753)
T 3ttv_A 663 DAVIVPCG-NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIA 711 (753)
T ss_dssp SEEEECCS-CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGGGGTCC
T ss_pred CEEEECCC-ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHHHcCCC
Confidence 99999999 88888999999999999999999999999999999999974
No 60
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.69 E-value=4.4e-17 Score=163.09 Aligned_cols=114 Identities=17% Similarity=0.227 Sum_probs=106.7
Q ss_pred CCCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 199 GSDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 199 ~~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
.+.++|+|++.++++..|+..++++|+++|++|+++|+++++ +.++.|..+.+|..+++++..+
T Consensus 598 i~grKVaILlaDGfEe~El~~pvdaLr~AG~~V~vVS~~~g~----------------V~gs~G~~V~aD~t~~~v~s~~ 661 (753)
T 3ttv_A 598 VKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGE----------------VTADDGTVLPIAATFAGAPSLT 661 (753)
T ss_dssp CTTCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSSE----------------EECTTSCEEECCEETTTSCGGG
T ss_pred CCCCEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEEcCCCe----------------EEeCCCCEEecccchhhCCCcC
Confidence 346899999999999999999999999999999999998764 7788899999999999998889
Q ss_pred cCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCC
Q 016237 279 YDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVL 329 (392)
Q Consensus 279 ~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL 329 (392)
||+|||||| ++..+..++.+++||+++++++|+|++||+|+++|+++||-
T Consensus 662 fDALVVPGG-g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa~AGL~ 711 (753)
T 3ttv_A 662 VDAVIVPCG-NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIA 711 (753)
T ss_dssp CSEEEECCS-CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGGGGTCC
T ss_pred CCEEEECCC-ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHHHcCCC
Confidence 999999999 88889999999999999999999999999999999999984
No 61
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.61 E-value=1.4e-15 Score=151.91 Aligned_cols=131 Identities=18% Similarity=0.210 Sum_probs=112.2
Q ss_pred CCCEEEEEec--CCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC
Q 016237 7 GKRSVLLLCG--DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS 84 (392)
Q Consensus 7 ~~~kI~ill~--~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (392)
+++||+||+. +||+..|+..+.++|+++|.+|.++++..+ . .+|.+++++++.
T Consensus 528 ~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vVs~~~g----------------~---------~vD~t~~~~~s~ 582 (688)
T 2iuf_A 528 DGLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVVAERXA----------------N---------NVDETYSASDAV 582 (688)
T ss_dssp TTCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEEESSCC----------------T---------TCCEESTTCCGG
T ss_pred CCCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEEeccCC----------------c---------ccccchhcCCcc
Confidence 3689999999 999999999999999999999999998642 0 568889998889
Q ss_pred CccEEEEcCCC-C----------------cccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCc
Q 016237 85 KYDGLVIPGGR-A----------------PEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPV 147 (392)
Q Consensus 85 ~~D~iiipGG~-~----------------~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~ 147 (392)
+||+||||||. + +..|..++.++++|+++++++|+|++||+|+++|..+|+..
T Consensus 583 ~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~~aGi~~---------- 652 (688)
T 2iuf_A 583 QFDAVVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALESGQISS---------- 652 (688)
T ss_dssp GCSEEEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHHHTTCCT----------
T ss_pred ccCeEEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHHHcCCCC----------
Confidence 99999999995 5 56688999999999999999999999999999999999853
Q ss_pred HHHHHHCCCeEEcCCCcceeeecCceEecCCCCChHHHHHHHHHHhcC
Q 016237 148 KPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGG 195 (392)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l~~ 195 (392)
.|+++||+.++ .-+++..+++.+..
T Consensus 653 ---------------------~d~GVvts~~~--~~~f~~~fi~~la~ 677 (688)
T 2iuf_A 653 ---------------------ERQGVYTGKNA--GDAFAKDIKSGLST 677 (688)
T ss_dssp ---------------------TSTTEEEESSS--SHHHHHHHHHHHHH
T ss_pred ---------------------CCCCEEEcCCc--cHHHHHHHHHHHHh
Confidence 24678887776 44577777776654
No 62
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.56 E-value=7.1e-15 Score=146.40 Aligned_cols=105 Identities=17% Similarity=0.148 Sum_probs=94.7
Q ss_pred CCCEEEEEecCC-CCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCC
Q 016237 7 GKRSVLLLCGDY-MEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSK 85 (392)
Q Consensus 7 ~~~kI~ill~~g-~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 85 (392)
++|||+||+.|| |+..|+..+.++|+++|++|+++++..+ .| +|.+++++++.+
T Consensus 536 ~grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVsp~~g---------------------~G----vD~t~~~~~s~~ 590 (688)
T 3ej6_A 536 ATLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIAEYLA---------------------SG----VDQTYSAADATA 590 (688)
T ss_dssp TTCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEESSCC---------------------TT----CCEETTTCCGGG
T ss_pred cCCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEeCCCC---------------------CC----cccCcccCChhc
Confidence 468999999999 9999999999999999999999998752 13 688899999999
Q ss_pred ccEEEEcCCCCc--------ccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCccc
Q 016237 86 YDGLVIPGGRAP--------EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVV 136 (392)
Q Consensus 86 ~D~iiipGG~~~--------~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll 136 (392)
||+|+||||... ..|+.++.+++|++++++++|+|++||+|+++|..+|+-
T Consensus 591 fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~~AGI~ 649 (688)
T 3ej6_A 591 FDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQSIGVE 649 (688)
T ss_dssp CSEEEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHHHTTCC
T ss_pred CcEEEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHHHcCCC
Confidence 999999999632 558889999999999999999999999999999999973
No 63
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.51 E-value=4.9e-14 Score=140.89 Aligned_cols=129 Identities=16% Similarity=0.198 Sum_probs=109.5
Q ss_pred CccEEEEeC--CCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 201 DKRILFLCG--DYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 201 ~~~v~ill~--~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
.+||+|++. ++++..|+..+.+.|+++|.+|.++++..+. .+|..+++.+..+
T Consensus 529 g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vVs~~~g~-------------------------~vD~t~~~~~s~~ 583 (688)
T 2iuf_A 529 GLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVVAERXAN-------------------------NVDETYSASDAVQ 583 (688)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEEESSCCT-------------------------TCCEESTTCCGGG
T ss_pred CCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEEeccCCc-------------------------ccccchhcCCccc
Confidence 578999999 9999999999999999999999999996331 6688888888889
Q ss_pred cCEEEEcCCC-C----------------hhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCceeecCchhH
Q 016237 279 YDALVVPGGR-A----------------PEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGKKCTAYPAVK 341 (392)
Q Consensus 279 ~D~viipgg~-~----------------~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~ 341 (392)
||+||||||. + +..|..+++++++|++++++||+|+|||+|+++|..+|+..
T Consensus 584 fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~~aGi~~----------- 652 (688)
T 2iuf_A 584 FDAVVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALESGQISS----------- 652 (688)
T ss_dssp CSEEEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHHHTTCCT-----------
T ss_pred cCeEEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHHHcCCCC-----------
Confidence 9999999995 4 56688999999999999999999999999999999999853
Q ss_pred HHHHHcCCeeeCCCCCceEEEcCCeEEccCCCChHHHHHHHHHHhc
Q 016237 342 LNVLLAGASWLEPDPIDRCFTDGNLVSGAAWPGHPEFISQLMALLG 387 (392)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~vv~dg~lvT~~g~~~~~~~~~~li~~l~ 387 (392)
.|+.+||++++ ..+++..+++.|.
T Consensus 653 --------------------~d~GVvts~~~--~~~f~~~fi~~la 676 (688)
T 2iuf_A 653 --------------------ERQGVYTGKNA--GDAFAKDIKSGLS 676 (688)
T ss_dssp --------------------TSTTEEEESSS--SHHHHHHHHHHHH
T ss_pred --------------------CCCCEEEcCCc--cHHHHHHHHHHHH
Confidence 23567777775 4556677776654
No 64
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.44 E-value=3.5e-13 Score=134.29 Aligned_cols=105 Identities=19% Similarity=0.206 Sum_probs=94.7
Q ss_pred CCccEEEEeCCC-CCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 200 SDKRILFLCGDY-MEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 200 ~~~~v~ill~~~-~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
+.+||+|++.++ ++..|+..+++.|+++|.+++++++..+ .| +|..+++++..+
T Consensus 536 ~grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVsp~~g---------------------~G----vD~t~~~~~s~~ 590 (688)
T 3ej6_A 536 ATLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIAEYLA---------------------SG----VDQTYSAADATA 590 (688)
T ss_dssp TTCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEESSCC---------------------TT----CCEETTTCCGGG
T ss_pred cCCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEeCCCC---------------------CC----cccCcccCChhc
Confidence 468999999999 9999999999999999999999999743 12 688899998899
Q ss_pred cCEEEEcCCCCh--------hhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCC
Q 016237 279 YDALVVPGGRAP--------EYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVL 329 (392)
Q Consensus 279 ~D~viipgg~~~--------~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL 329 (392)
||+||||||... +.|..++.+++||+++++++|+|++||+|+++|.++|+-
T Consensus 591 fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~~AGI~ 649 (688)
T 3ej6_A 591 FDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQSIGVE 649 (688)
T ss_dssp CSEEEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHHHTTCC
T ss_pred CcEEEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHHHcCCC
Confidence 999999999643 568999999999999999999999999999999999984
No 65
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.06 E-value=1.5e-10 Score=101.66 Aligned_cols=93 Identities=23% Similarity=0.318 Sum_probs=74.5
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
+||+|+.+++++. ...+.+.|+++|+++.+++.. + +..+||+
T Consensus 3 ~~i~il~~~~~~~--~~~~~~~l~~~g~~~~~~~~~----------------------------------~--~~~~~d~ 44 (213)
T 3d54_D 3 PRACVVVYPGSNC--DRDAYHALEINGFEPSYVGLD----------------------------------D--KLDDYEL 44 (213)
T ss_dssp CEEEEECCTTEEE--HHHHHHHHHTTTCEEEEECTT----------------------------------C--CCSSCSE
T ss_pred cEEEEEEcCCCCc--cHHHHHHHHHCCCEEEEEecC----------------------------------C--CcccCCE
Confidence 6899999998874 134589999999999887632 1 1237999
Q ss_pred EEEcCCCCcc-c-----ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCe
Q 016237 89 LVIPGGRAPE-Y-----LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGR 139 (392)
Q Consensus 89 iiipGG~~~~-~-----~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~ 139 (392)
||||||.+.. . +..++.+.++|+++++++++|.+||.|.++|+.+|+|+|+
T Consensus 45 lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~ 101 (213)
T 3d54_D 45 IILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGA 101 (213)
T ss_dssp EEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSE
T ss_pred EEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCC
Confidence 9999997532 2 1235678999999999999999999999999999999985
No 66
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.01 E-value=5e-10 Score=98.27 Aligned_cols=95 Identities=23% Similarity=0.351 Sum_probs=75.3
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCc
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGY 279 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 279 (392)
||++|+++.+++++. ...+.+.|+++|+++.++++. + ...++
T Consensus 1 m~~~i~il~~~~~~~--~~~~~~~l~~~g~~~~~~~~~----------------------------------~--~~~~~ 42 (213)
T 3d54_D 1 MKPRACVVVYPGSNC--DRDAYHALEINGFEPSYVGLD----------------------------------D--KLDDY 42 (213)
T ss_dssp CCCEEEEECCTTEEE--HHHHHHHHHTTTCEEEEECTT----------------------------------C--CCSSC
T ss_pred CCcEEEEEEcCCCCc--cHHHHHHHHHCCCEEEEEecC----------------------------------C--CcccC
Confidence 467899999988763 134589999999998887531 1 23479
Q ss_pred CEEEEcCCCCh-hh-----ccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCCc
Q 016237 280 DALVVPGGRAP-EY-----LALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKGK 332 (392)
Q Consensus 280 D~viipgg~~~-~~-----~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g~ 332 (392)
|.||||||.+. +. +..++.+.+||+++++++++|.+||.|.++|+.+|+|.|+
T Consensus 43 d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~ 101 (213)
T 3d54_D 43 ELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGA 101 (213)
T ss_dssp SEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSE
T ss_pred CEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCC
Confidence 99999998753 22 2245778999999999999999999999999999999884
No 67
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=98.42 E-value=6e-07 Score=80.25 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=69.4
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
+|||+||..+.++ ........|++.|++++++....+. .+ .. +..+||
T Consensus 3 ~~~vliiqh~~~e--~~~~i~~~l~~~G~~v~v~~~~~~~-----------------------~~-----p~--~~~~~d 50 (250)
T 3m3p_A 3 LKPVMIIQFSASE--GPGHFGDFLAGEHIPFQVLRMDRSD-----------------------PL-----PA--EIRDCS 50 (250)
T ss_dssp CCCEEEEESSSSC--CCHHHHHHHHHTTCCEEEEEGGGTC-----------------------CC-----CS--CGGGSS
T ss_pred CCeEEEEECCCCC--CHHHHHHHHHHCCCeEEEEeccCCC-----------------------cC-----cC--ccccCC
Confidence 4579999988877 4555567799999999998754220 00 11 234799
Q ss_pred EEEEcCCCCc-cc-ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAP-EY-LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~-~~-~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+||||||... .. ........++|+++.+.++||.+||.|.++|+.+
T Consensus 51 ~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~ 98 (250)
T 3m3p_A 51 GLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKA 98 (250)
T ss_dssp EEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred EEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 9999999742 21 2223567899999999999999999999999976
No 68
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.40 E-value=3.3e-07 Score=79.02 Aligned_cols=85 Identities=24% Similarity=0.359 Sum_probs=62.6
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
+||+|+-+. ..+....+.|+++|+++.++++. ++ ..+||+
T Consensus 2 m~I~il~~~----~~~~~~~~~l~~~g~~~~~~~~~----------------------------------~~--l~~~d~ 41 (196)
T 2nv0_A 2 LTIGVLGLQ----GAVREHIHAIEACGAAGLVVKRP----------------------------------EQ--LNEVDG 41 (196)
T ss_dssp CEEEEECSS----SCCHHHHHHHHHTTCEEEEECSG----------------------------------GG--GGGCSE
T ss_pred cEEEEEEcc----CCcHHHHHHHHHCCCEEEEeCCh----------------------------------HH--HhhCCE
Confidence 589999752 13344568999999988877531 11 236999
Q ss_pred EEEcCCCCcc--cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 89 LVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 89 iiipGG~~~~--~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
|++|||.... .+..+..+.++|+++.++++|+.+||.|.++|+.+
T Consensus 42 iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~ 88 (196)
T 2nv0_A 42 LILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKE 88 (196)
T ss_dssp EEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBC
T ss_pred EEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHH
Confidence 9999996421 12233456889999999999999999999999986
No 69
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.40 E-value=3.4e-07 Score=80.43 Aligned_cols=86 Identities=22% Similarity=0.362 Sum_probs=64.0
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
.+||+|+.+++ .+....+.|+++|+++.+++.. ++ ..+||
T Consensus 23 ~~~I~il~~~~----~~~~~~~~l~~~G~~~~~~~~~----------------------------------~~--l~~~D 62 (219)
T 1q7r_A 23 NMKIGVLGLQG----AVREHVRAIEACGAEAVIVKKS----------------------------------EQ--LEGLD 62 (219)
T ss_dssp CCEEEEESCGG----GCHHHHHHHHHTTCEEEEECSG----------------------------------GG--GTTCS
T ss_pred CCEEEEEeCCC----CcHHHHHHHHHCCCEEEEECCH----------------------------------HH--HhhCC
Confidence 46899997644 2334568999999988887531 12 23699
Q ss_pred EEEEcCCCCcc--cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~--~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+||+|||.+.. .+..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 63 glil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~ 110 (219)
T 1q7r_A 63 GLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKR 110 (219)
T ss_dssp EEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEE
T ss_pred EEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHH
Confidence 99999997422 12224456789999999999999999999999975
No 70
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=98.36 E-value=2e-06 Score=76.41 Aligned_cols=93 Identities=17% Similarity=0.257 Sum_probs=68.9
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
+||++|..+.++ ......+.|.+.|++++++....+. .+.+ +..+||+
T Consensus 1 m~i~vi~h~~~e--~~g~~~~~l~~~g~~~~~~~~~~~~-----------------------------~~p~-~~~~~d~ 48 (236)
T 3l7n_A 1 MRIHFILHETFE--APGAYLAWAALRGHDVSMTKVYRYE-----------------------------KLPK-DIDDFDM 48 (236)
T ss_dssp CEEEEEECCTTS--CCHHHHHHHHHTTCEEEEEEGGGTC-----------------------------CCCS-CGGGCSE
T ss_pred CeEEEEeCCCCC--CchHHHHHHHHCCCeEEEEeeeCCC-----------------------------CCCC-CccccCE
Confidence 489999988887 4555567899999999988764220 1111 2347999
Q ss_pred EEEcCCCCc-ccccCC------HHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 89 LVIPGGRAP-EYLAMN------DSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 89 iiipGG~~~-~~~~~~------~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
|||+||.+. .....+ ....++|+++.++++||.+||.|.++|+.+
T Consensus 49 lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~ 100 (236)
T 3l7n_A 49 LILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVA 100 (236)
T ss_dssp EEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHH
T ss_pred EEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHH
Confidence 999999753 211111 347899999999999999999999999976
No 71
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=98.30 E-value=6.9e-07 Score=77.82 Aligned_cols=86 Identities=20% Similarity=0.307 Sum_probs=63.6
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
++||+|+-+++ .+....+.|+++|.++.+++.. +++ .+||
T Consensus 20 ~~~I~ii~~~~----~~~~~~~~l~~~g~~~~~~~~~----------------------------------~~l--~~~d 59 (208)
T 2iss_D 20 HMKIGVLGVQG----DVREHVEALHKLGVETLIVKLP----------------------------------EQL--DMVD 59 (208)
T ss_dssp CCEEEEECSSS----CHHHHHHHHHHTTCEEEEECSG----------------------------------GGG--GGCS
T ss_pred CcEEEEEECCC----chHHHHHHHHHCCCEEEEeCCh----------------------------------HHH--hhCC
Confidence 46899996522 5666788999999988887531 112 2699
Q ss_pred EEEEcCCCCccc--ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~~--~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+|++|||..... +..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 60 ~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~ 107 (208)
T 2iss_D 60 GLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKR 107 (208)
T ss_dssp EEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEE
T ss_pred EEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHH
Confidence 999999953211 2223346789999999999999999999999976
No 72
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=98.28 E-value=3.2e-06 Score=75.48 Aligned_cols=94 Identities=19% Similarity=0.240 Sum_probs=70.7
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
++++.++....++ ........|++.|++++++....+. .+. + +..+||
T Consensus 3 ~~~vliiqh~~~e--~~~~i~~~l~~~G~~v~v~~~~~~~-----------------------~~p-----~--~~~~~d 50 (250)
T 3m3p_A 3 LKPVMIIQFSASE--GPGHFGDFLAGEHIPFQVLRMDRSD-----------------------PLP-----A--EIRDCS 50 (250)
T ss_dssp CCCEEEEESSSSC--CCHHHHHHHHHTTCCEEEEEGGGTC-----------------------CCC-----S--CGGGSS
T ss_pred CCeEEEEECCCCC--CHHHHHHHHHHCCCeEEEEeccCCC-----------------------cCc-----C--ccccCC
Confidence 5678888777766 6777778899999999988764221 000 1 234799
Q ss_pred EEEEcCCCChh--hccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAPE--YLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~~--~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.||||||.... ..+....+.++|+++.+.++||.+||.|.++|+.+
T Consensus 51 ~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~ 98 (250)
T 3m3p_A 51 GLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKA 98 (250)
T ss_dssp EEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred EEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 99999998531 13334578899999999999999999999999987
No 73
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=98.25 E-value=3.1e-06 Score=73.14 Aligned_cols=86 Identities=24% Similarity=0.227 Sum_probs=62.6
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
+||+|+-+ ++. .+....+.|+++|.++.+++.. ++ ..++|+
T Consensus 3 ~~I~iid~-~~~--~~~~~~~~l~~~G~~~~~~~~~----------------------------------~~--l~~~d~ 43 (200)
T 1ka9_H 3 MKALLIDY-GSG--NLRSAAKALEAAGFSVAVAQDP----------------------------------KA--HEEADL 43 (200)
T ss_dssp CEEEEECS-SCS--CHHHHHHHHHHTTCEEEEESST----------------------------------TS--CSSCSE
T ss_pred cEEEEEeC-CCc--cHHHHHHHHHHCCCeEEEecCh----------------------------------HH--cccCCE
Confidence 58988843 322 4455689999999998887521 11 236999
Q ss_pred EEEcCCCCccc---ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 89 LVIPGGRAPEY---LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 89 iiipGG~~~~~---~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
|++|||..+.. -..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 44 lil~G~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~ 91 (200)
T 1ka9_H 44 LVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEG 91 (200)
T ss_dssp EEECCCSCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSE
T ss_pred EEECCCCcHHHHHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHh
Confidence 99999533211 1123557899999999999999999999999987
No 74
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.22 E-value=2.7e-06 Score=91.70 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=74.1
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
++||+|+.++|.+ .......+|+++|+++.++..+. +..+ -. ...+||
T Consensus 1047 ~pkVaIi~~~G~N--~~~~~~~A~~~aG~~~~~v~~~d--------------------------l~~~--~~--~l~~~d 1094 (1303)
T 3ugj_A 1047 RPKVAVLREQGVN--SHVEMAAAFHRAGFDAIDVHMSD--------------------------LLGG--RI--GLGNFH 1094 (1303)
T ss_dssp CCEEEEEECTTCC--CHHHHHHHHHHTTCEEEEEEHHH--------------------------HHTT--SC--CGGGCS
T ss_pred CCEEEEEecCCcC--CHHHHHHHHHHhCCceEEEeecc--------------------------cccC--cc--cHhhCC
Confidence 4589999999998 34456678889999988764210 0000 01 234799
Q ss_pred EEEEcCCCCc-cc----------ccCCHHHHHHHHHHH-hCCCeEEEEchhhHHhhcC-cccCCe
Q 016237 88 GLVIPGGRAP-EY----------LAMNDSVIDLVRKFS-NSGKTIASICHGQLILAAA-DVVKGR 139 (392)
Q Consensus 88 ~iiipGG~~~-~~----------~~~~~~l~~~l~~~~-~~~~~i~aic~G~~~La~a-gll~g~ 139 (392)
.|++|||.+. +. ...++.+.+.+++++ ++++++.+||+|.++|.++ |||.|.
T Consensus 1095 ~lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1095 ALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIPGS 1159 (1303)
T ss_dssp EEEECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGSTTC
T ss_pred EEEECCCCcchhhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHHHhcCcCCCC
Confidence 9999999642 21 245677888899876 5799999999999999999 999986
No 75
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=98.20 E-value=7.5e-06 Score=72.64 Aligned_cols=93 Identities=17% Similarity=0.315 Sum_probs=69.4
Q ss_pred ccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCE
Q 016237 202 KRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDA 281 (392)
Q Consensus 202 ~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 281 (392)
++|+++..+.++ .+..+.+.+++.|++++++....+. .+.+ +..+||+
T Consensus 1 m~i~vi~h~~~e--~~g~~~~~l~~~g~~~~~~~~~~~~-----------------------------~~p~-~~~~~d~ 48 (236)
T 3l7n_A 1 MRIHFILHETFE--APGAYLAWAALRGHDVSMTKVYRYE-----------------------------KLPK-DIDDFDM 48 (236)
T ss_dssp CEEEEEECCTTS--CCHHHHHHHHHTTCEEEEEEGGGTC-----------------------------CCCS-CGGGCSE
T ss_pred CeEEEEeCCCCC--CchHHHHHHHHCCCeEEEEeeeCCC-----------------------------CCCC-CccccCE
Confidence 367777777776 6677778899999999988764210 1111 2347999
Q ss_pred EEEcCCCCh-hh----ccCC--hHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 282 LVVPGGRAP-EY----LALN--ENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 282 viipgg~~~-~~----~~~~--~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
|||+||.+. .. .+.- ....++|+++.++++||.+||.|.++|+.+
T Consensus 49 lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~ 100 (236)
T 3l7n_A 49 LILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVA 100 (236)
T ss_dssp EEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHH
T ss_pred EEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHH
Confidence 999999864 21 2222 348899999999999999999999999987
No 76
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.13 E-value=3.1e-06 Score=72.88 Aligned_cols=86 Identities=23% Similarity=0.278 Sum_probs=62.2
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
|+++.++-+.+ .+....+.|+++|+++.++++. ++ ..++|
T Consensus 1 ~m~I~il~~~~----~~~~~~~~l~~~g~~~~~~~~~----------------------------------~~--l~~~d 40 (196)
T 2nv0_A 1 MLTIGVLGLQG----AVREHIHAIEACGAAGLVVKRP----------------------------------EQ--LNEVD 40 (196)
T ss_dssp CCEEEEECSSS----CCHHHHHHHHHTTCEEEEECSG----------------------------------GG--GGGCS
T ss_pred CcEEEEEEccC----CcHHHHHHHHHCCCEEEEeCCh----------------------------------HH--HhhCC
Confidence 35677775421 3444568999999887776431 11 23689
Q ss_pred EEEEcCCCChh--hccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAPE--YLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~~--~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.|++|||.... .+..+..+.++|+++.++++|+.+||.|.++|+.+
T Consensus 41 ~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~ 88 (196)
T 2nv0_A 41 GLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKE 88 (196)
T ss_dssp EEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBC
T ss_pred EEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHH
Confidence 99999997532 23334566899999999999999999999999976
No 77
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.13 E-value=2.8e-06 Score=72.75 Aligned_cols=85 Identities=24% Similarity=0.289 Sum_probs=64.1
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
++|+|+..++ .+....+.|+++|+++.+++.. ++ ..++|+
T Consensus 3 p~Igi~~~~~----~~~~~~~~l~~~G~~~~~~~~~----------------------------------~~--l~~~dg 42 (191)
T 2ywd_A 3 GVVGVLALQG----DFREHKEALKRLGIEAKEVRKK----------------------------------EH--LEGLKA 42 (191)
T ss_dssp CCEEEECSSS----CHHHHHHHHHTTTCCCEEECSG----------------------------------GG--GTTCSE
T ss_pred cEEEEEecCC----chHHHHHHHHHCCCEEEEeCCh----------------------------------hh--hccCCE
Confidence 4799998754 4567889999999887776421 01 236899
Q ss_pred EEEcCCCC--cccccCCHHHHHHHHHHHhCC-CeEEEEchhhHHhhcC
Q 016237 89 LVIPGGRA--PEYLAMNDSVIDLVRKFSNSG-KTIASICHGQLILAAA 133 (392)
Q Consensus 89 iiipGG~~--~~~~~~~~~l~~~l~~~~~~~-~~i~aic~G~~~La~a 133 (392)
|++|||.. ...+..+..+.++|+++.+++ +||.+||.|.++|+.+
T Consensus 43 lil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~ 90 (191)
T 2ywd_A 43 LIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKE 90 (191)
T ss_dssp EEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEE
T ss_pred EEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHH
Confidence 99999952 122322356789999999999 9999999999999976
No 78
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.09 E-value=4.4e-06 Score=73.27 Aligned_cols=86 Identities=27% Similarity=0.366 Sum_probs=63.0
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
.++|+|+.+.+ .+....+.|+++|+++.++++. ++ .+++|
T Consensus 23 ~~~I~il~~~~----~~~~~~~~l~~~G~~~~~~~~~----------------------------------~~--l~~~D 62 (219)
T 1q7r_A 23 NMKIGVLGLQG----AVREHVRAIEACGAEAVIVKKS----------------------------------EQ--LEGLD 62 (219)
T ss_dssp CCEEEEESCGG----GCHHHHHHHHHTTCEEEEECSG----------------------------------GG--GTTCS
T ss_pred CCEEEEEeCCC----CcHHHHHHHHHCCCEEEEECCH----------------------------------HH--HhhCC
Confidence 45677775533 2344568899999888777531 11 23689
Q ss_pred EEEEcCCCChh--hccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAPE--YLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~~--~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.||+|||.+.. .+..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 63 glil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~ 110 (219)
T 1q7r_A 63 GLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKR 110 (219)
T ss_dssp EEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEE
T ss_pred EEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHH
Confidence 99999997532 23335566899999999999999999999999976
No 79
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=98.05 E-value=4.1e-06 Score=73.92 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=62.7
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhC---CCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCC
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAF---GVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSK 85 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~a---g~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 85 (392)
++|+|+.+++. +....+.|+++ |.++.+++.. +++ .+
T Consensus 4 ~~I~Il~~~~~----~~~~~~~l~~~~~~G~~~~~~~~~----------------------------------~~l--~~ 43 (227)
T 2abw_A 4 ITIGVLSLQGD----FEPHINHFIKLQIPSLNIIQVRNV----------------------------------HDL--GL 43 (227)
T ss_dssp EEEEEECTTSC----CHHHHHHHHTTCCTTEEEEEECSH----------------------------------HHH--HT
T ss_pred cEEEEEeCCCC----cHHHHHHHHHhccCCeEEEEEcCc----------------------------------ccc--cc
Confidence 57999987642 34568888888 8776665421 111 26
Q ss_pred ccEEEEcCCCCc-c-cccCC--HHHHHHHHHHHhC-CCeEEEEchhhHHhhcC
Q 016237 86 YDGLVIPGGRAP-E-YLAMN--DSVIDLVRKFSNS-GKTIASICHGQLILAAA 133 (392)
Q Consensus 86 ~D~iiipGG~~~-~-~~~~~--~~l~~~l~~~~~~-~~~i~aic~G~~~La~a 133 (392)
+|+||+|||... . .+..+ ..+.++|+++.++ ++||.+||.|.++|+.+
T Consensus 44 ~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~ 96 (227)
T 2abw_A 44 CDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKN 96 (227)
T ss_dssp CSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEE
T ss_pred CCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHH
Confidence 899999999632 1 22233 5689999999999 99999999999999986
No 80
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=98.04 E-value=7.3e-06 Score=70.09 Aligned_cols=86 Identities=16% Similarity=0.299 Sum_probs=62.4
Q ss_pred EEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEE
Q 016237 11 VLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLV 90 (392)
Q Consensus 11 I~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ii 90 (392)
|+|+=+.+.. ...+.+.|+++|.++.++.... .++++...+||+|+
T Consensus 3 i~iid~~~~~---~~~~~~~l~~~G~~~~~~~~~~-------------------------------~~~~~~~~~~dgli 48 (189)
T 1wl8_A 3 IVIMDNGGQY---VHRIWRTLRYLGVETKIIPNTT-------------------------------PLEEIKAMNPKGII 48 (189)
T ss_dssp EEEEECSCTT---HHHHHHHHHHTTCEEEEEETTC-------------------------------CHHHHHHTCCSEEE
T ss_pred EEEEECCCch---HHHHHHHHHHCCCeEEEEECCC-------------------------------ChHHhcccCCCEEE
Confidence 6666554333 5577899999999998876531 11222223699999
Q ss_pred EcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 91 IPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 91 ipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+|||..+. +...+.++++++.++++|+.+||.|.++|+.+
T Consensus 49 l~Gg~~~~---~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~ 88 (189)
T 1wl8_A 49 FSGGPSLE---NTGNCEKVLEHYDEFNVPILGICLGHQLIAKF 88 (189)
T ss_dssp ECCCSCTT---CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHH
T ss_pred ECCCCChh---hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHH
Confidence 99997322 24556888987778999999999999999986
No 81
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=97.99 E-value=1.2e-05 Score=69.39 Aligned_cols=87 Identities=20% Similarity=0.254 Sum_probs=61.8
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
+++|+++-+ +.. .+....+.|+++|.++.+++.. ++ ..++|
T Consensus 2 ~~~I~iid~-~~~--~~~~~~~~l~~~G~~~~~~~~~----------------------------------~~--l~~~d 42 (200)
T 1ka9_H 2 RMKALLIDY-GSG--NLRSAAKALEAAGFSVAVAQDP----------------------------------KA--HEEAD 42 (200)
T ss_dssp -CEEEEECS-SCS--CHHHHHHHHHHTTCEEEEESST----------------------------------TS--CSSCS
T ss_pred ccEEEEEeC-CCc--cHHHHHHHHHHCCCeEEEecCh----------------------------------HH--cccCC
Confidence 356766633 222 4556789999999888876421 01 23689
Q ss_pred EEEEcCCCCh-hhcc--CChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAP-EYLA--LNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~-~~~~--~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.||+||+..+ ..+. .+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 43 ~lil~G~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~ 91 (200)
T 1ka9_H 43 LLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEG 91 (200)
T ss_dssp EEEECCCSCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSE
T ss_pred EEEECCCCcHHHHHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHh
Confidence 9999995433 2211 12558899999999999999999999999998
No 82
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=97.95 E-value=1.5e-05 Score=68.08 Aligned_cols=86 Identities=19% Similarity=0.314 Sum_probs=61.1
Q ss_pred EEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEE
Q 016237 204 ILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALV 283 (392)
Q Consensus 204 v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~vi 283 (392)
++++-+.+.. ...+.+.|+++|+++.++.... .++++...++|.|+
T Consensus 3 i~iid~~~~~---~~~~~~~l~~~G~~~~~~~~~~-------------------------------~~~~~~~~~~dgli 48 (189)
T 1wl8_A 3 IVIMDNGGQY---VHRIWRTLRYLGVETKIIPNTT-------------------------------PLEEIKAMNPKGII 48 (189)
T ss_dssp EEEEECSCTT---HHHHHHHHHHTTCEEEEEETTC-------------------------------CHHHHHHTCCSEEE
T ss_pred EEEEECCCch---HHHHHHHHHHCCCeEEEEECCC-------------------------------ChHHhcccCCCEEE
Confidence 4444443332 5578899999999988886531 11121113689999
Q ss_pred EcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 284 VPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 284 ipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
+|||..+. ....+.++++++.++++|+.+||.|.++|+.+
T Consensus 49 l~Gg~~~~---~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~ 88 (189)
T 1wl8_A 49 FSGGPSLE---NTGNCEKVLEHYDEFNVPILGICLGHQLIAKF 88 (189)
T ss_dssp ECCCSCTT---CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHH
T ss_pred ECCCCChh---hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHH
Confidence 99997332 24557889987778999999999999999987
No 83
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=97.94 E-value=1.8e-05 Score=85.46 Aligned_cols=100 Identities=14% Similarity=0.211 Sum_probs=73.8
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
..+++|+.++|.+ ........|+++|+++..+..+ +..-......+||
T Consensus 1047 ~pkVaIi~~~G~N--~~~~~~~A~~~aG~~~~~v~~~------------------------------dl~~~~~~l~~~d 1094 (1303)
T 3ugj_A 1047 RPKVAVLREQGVN--SHVEMAAAFHRAGFDAIDVHMS------------------------------DLLGGRIGLGNFH 1094 (1303)
T ss_dssp CCEEEEEECTTCC--CHHHHHHHHHHTTCEEEEEEHH------------------------------HHHTTSCCGGGCS
T ss_pred CCEEEEEecCCcC--CHHHHHHHHHHhCCceEEEeec------------------------------ccccCcccHhhCC
Confidence 4589999999988 4455677888999987776321 0000111235799
Q ss_pred EEEEcCCCCh-hh----------ccCChHHHHHHHHHH-HcCCcEEEEehHHHHHHHc-CCCCCc
Q 016237 281 ALVVPGGRAP-EY----------LALNENVIALVKDFM-EAKKPVASICHGQQILAAA-GVLKGK 332 (392)
Q Consensus 281 ~viipgg~~~-~~----------~~~~~~l~~~l~~~~-~~g~~i~aiC~G~~~La~a-glL~g~ 332 (392)
.|++|||... +. ...++.+.+.+++++ ++++++.+||+|.++|.++ |||.|.
T Consensus 1095 ~lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1095 ALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIPGS 1159 (1303)
T ss_dssp EEEECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGSTTC
T ss_pred EEEECCCCcchhhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHHHhcCcCCCC
Confidence 9999999642 22 234577888899876 5799999999999999999 999986
No 84
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=97.93 E-value=1.2e-05 Score=69.94 Aligned_cols=86 Identities=21% Similarity=0.261 Sum_probs=62.4
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
.++|+++.+. ..+....+.|++.|+++.++++. ++ ..++|
T Consensus 20 ~~~I~ii~~~----~~~~~~~~~l~~~g~~~~~~~~~----------------------------------~~--l~~~d 59 (208)
T 2iss_D 20 HMKIGVLGVQ----GDVREHVEALHKLGVETLIVKLP----------------------------------EQ--LDMVD 59 (208)
T ss_dssp CCEEEEECSS----SCHHHHHHHHHHTTCEEEEECSG----------------------------------GG--GGGCS
T ss_pred CcEEEEEECC----CchHHHHHHHHHCCCEEEEeCCh----------------------------------HH--HhhCC
Confidence 4567777542 25666788888899888777431 01 12689
Q ss_pred EEEEcCCCChh--hccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAPE--YLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~~--~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.||+|||.... .+..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 60 ~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~ 107 (208)
T 2iss_D 60 GLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKR 107 (208)
T ss_dssp EEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEE
T ss_pred EEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHH
Confidence 99999985321 12334456899999999999999999999999987
No 85
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.91 E-value=1.2e-05 Score=68.71 Aligned_cols=86 Identities=24% Similarity=0.282 Sum_probs=63.1
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
.++|.|+...+ .+....+.|+++|+++.+++.. ++ .+++|
T Consensus 2 ~p~Igi~~~~~----~~~~~~~~l~~~G~~~~~~~~~----------------------------------~~--l~~~d 41 (191)
T 2ywd_A 2 RGVVGVLALQG----DFREHKEALKRLGIEAKEVRKK----------------------------------EH--LEGLK 41 (191)
T ss_dssp -CCEEEECSSS----CHHHHHHHHHTTTCCCEEECSG----------------------------------GG--GTTCS
T ss_pred CcEEEEEecCC----chHHHHHHHHHCCCEEEEeCCh----------------------------------hh--hccCC
Confidence 35788876653 4567889999999877666421 01 23689
Q ss_pred EEEEcCCCCh--hhccCChHHHHHHHHHHHcC-CcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAP--EYLALNENVIALVKDFMEAK-KPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~--~~~~~~~~l~~~l~~~~~~g-~~i~aiC~G~~~La~a 326 (392)
.|++|||... ..+..+..+.++|+++.+++ +||.+||.|.++|+.+
T Consensus 42 glil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~ 90 (191)
T 2ywd_A 42 ALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKE 90 (191)
T ss_dssp EEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEE
T ss_pred EEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHH
Confidence 9999999532 22333456789999999999 9999999999999987
No 86
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=97.86 E-value=6.8e-06 Score=71.56 Aligned_cols=86 Identities=19% Similarity=0.186 Sum_probs=59.0
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
+||+|+=| -.--+......|++.|+++.++.. .+++ .++|.
T Consensus 3 ~~I~iiD~---g~~n~~si~~al~~~G~~~~v~~~----------------------------------~~~l--~~~D~ 43 (211)
T 4gud_A 3 QNVVIIDT---GCANISSVKFAIERLGYAVTISRD----------------------------------PQVV--LAADK 43 (211)
T ss_dssp CCEEEECC---CCTTHHHHHHHHHHTTCCEEEECC----------------------------------HHHH--HHCSE
T ss_pred CEEEEEEC---CCChHHHHHHHHHHCCCEEEEECC----------------------------------HHHH--hCCCE
Confidence 57888743 223456788899999999887531 1111 25799
Q ss_pred EEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 89 LVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 89 iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
||+||+..+......-....+++...++++||.+||.|.++|+.+
T Consensus 44 lilPG~g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~ 88 (211)
T 4gud_A 44 LFLPGVGTASEAMKNLTERDLIELVKRVEKPLLGICLGMQLLGKL 88 (211)
T ss_dssp EEECCCSCHHHHHHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSE
T ss_pred EEECCCCCHHHHHHHHHhcChHHHHHHcCCCEEEEchhHhHHHHH
Confidence 999996543321122223345777788999999999999999876
No 87
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=97.85 E-value=2.7e-05 Score=66.26 Aligned_cols=82 Identities=20% Similarity=0.297 Sum_probs=56.9
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
|||+|+-.++ .+....+.|+++|.++.+++.. ++ ..++|+
T Consensus 1 m~i~vl~~~g----~~~~~~~~l~~~G~~~~~~~~~----------------------------------~~--~~~~dg 40 (186)
T 2ywj_A 1 MIIGVLAIQG----DVEEHEEAIKKAGYEAKKVKRV----------------------------------ED--LEGIDA 40 (186)
T ss_dssp CEEEEECSSS----CCHHHHHHHHHTTSEEEEECSG----------------------------------GG--GTTCSE
T ss_pred CEEEEEecCc----chHHHHHHHHHCCCEEEEECCh----------------------------------HH--hccCCE
Confidence 4799996533 4455679999999988776421 11 236899
Q ss_pred EEEcCCCCccc--ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 89 LVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 89 iiipGG~~~~~--~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
|++|||.+... +.....+.++++ ++++||.+||.|.++|+.+
T Consensus 41 lil~GG~~~~~~~~~~~~~~~~~i~---~~~~PilGIC~G~Qll~~~ 84 (186)
T 2ywj_A 41 LIIPGGESTAIGKLMKKYGLLEKIK---NSNLPILGTCAGMVLLSKG 84 (186)
T ss_dssp EEECCSCHHHHHHHHHHTTHHHHHH---TCCCCEEEETHHHHHHSSC
T ss_pred EEECCCCchhhhhhhhccCHHHHHH---hcCCcEEEECHHHHHHHHH
Confidence 99999964221 111223455555 7899999999999999988
No 88
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=97.84 E-value=3.7e-05 Score=66.28 Aligned_cols=85 Identities=21% Similarity=0.301 Sum_probs=59.2
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCC-----CeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCC
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFG-----VSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP 83 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag-----~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (392)
|||+||-+..-+ +....+.|++.| .++.++... ++
T Consensus 1 m~I~iid~~~g~---~~s~~~~l~~~G~~~~~~~~~~~~~~----------------------------------~~--- 40 (201)
T 1gpw_B 1 MRIGIISVGPGN---IMNLYRGVKRASENFEDVSIELVESP----------------------------------RN--- 40 (201)
T ss_dssp CEEEEECCSSSC---CHHHHHHHHHHSTTBSSCEEEEECSC----------------------------------CS---
T ss_pred CEEEEEecCCch---HHHHHHHHHHcCCCCCceEEEEECCC----------------------------------cc---
Confidence 478888655323 344557888888 777775421 11
Q ss_pred CCccEEEEcCCCCccc----ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCc
Q 016237 84 SKYDGLVIPGGRAPEY----LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD 134 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~----~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ag 134 (392)
.++|+|++|||..... +. +..+.++|+++.++++||.+||.|.++|+.+.
T Consensus 41 ~~~dglilpG~g~~~~~~~~l~-~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~ 94 (201)
T 1gpw_B 41 DLYDLLFIPGVGHFGEGMRRLR-ENDLIDFVRKHVEDERYVVGVCLGMQLLFEES 94 (201)
T ss_dssp SCCSEEEECCCSCSHHHHHHHH-HTTCHHHHHHHHHTTCEEEEETHHHHTTSSEE
T ss_pred cCCCEEEECCCCcHHHHHHHHH-hhCHHHHHHHHHHcCCeEEEEChhHHHHHHhh
Confidence 3699999999633211 11 12367899999999999999999999999864
No 89
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=97.78 E-value=2.1e-05 Score=67.50 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=59.6
Q ss_pred EEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEE
Q 016237 11 VLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLV 90 (392)
Q Consensus 11 I~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ii 90 (392)
|+||=..+.. ...+.+.|+++|+++.++..+.. .++++...+||+|+
T Consensus 4 i~iid~~~s~---~~~~~~~l~~~G~~~~v~~~~~~------------------------------~~~~~~~~~~dgli 50 (195)
T 1qdl_B 4 TLIIDNYDSF---VYNIAQIVGELGSYPIVIRNDEI------------------------------SIKGIERIDPDRLI 50 (195)
T ss_dssp EEEEECSCSS---HHHHHHHHHHTTCEEEEEETTTS------------------------------CHHHHHHHCCSEEE
T ss_pred EEEEECCCch---HHHHHHHHHhCCCEEEEEeCCCC------------------------------CHHHHhhCCCCEEE
Confidence 7777633222 34678899999999988765411 12222222599999
Q ss_pred EcCCCCccc-ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 91 IPGGRAPEY-LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 91 ipGG~~~~~-~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
++||.+... ..+.+...++++++ ++++|+.+||.|.++|+.+
T Consensus 51 l~gG~~~~~~~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~ 93 (195)
T 1qdl_B 51 ISPGPGTPEKREDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYA 93 (195)
T ss_dssp ECCCSSCTTSHHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHH
T ss_pred ECCCCCChhhhhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHH
Confidence 988865322 11112346888874 7899999999999999976
No 90
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=97.70 E-value=5.1e-05 Score=65.13 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=54.3
Q ss_pred HHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCChhh-ccCC
Q 016237 218 AVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAPEY-LALN 296 (392)
Q Consensus 218 ~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~~~-~~~~ 296 (392)
..+.+.|+++|+++.++..+.. .++++...+||.|+++||.+... ....
T Consensus 15 ~~~~~~l~~~G~~~~v~~~~~~------------------------------~~~~~~~~~~dglil~gG~~~~~~~~~~ 64 (195)
T 1qdl_B 15 YNIAQIVGELGSYPIVIRNDEI------------------------------SIKGIERIDPDRLIISPGPGTPEKREDI 64 (195)
T ss_dssp HHHHHHHHHTTCEEEEEETTTS------------------------------CHHHHHHHCCSEEEECCCSSCTTSHHHH
T ss_pred HHHHHHHHhCCCEEEEEeCCCC------------------------------CHHHHhhCCCCEEEECCCCCChhhhhhh
Confidence 4678899999999888865310 11122112589999988876422 1112
Q ss_pred hHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 297 ENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 297 ~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
+...++++++ ++++|+.+||.|.++|+.+
T Consensus 65 ~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~ 93 (195)
T 1qdl_B 65 GVSLDVIKYL-GKRTPILGVCLGHQAIGYA 93 (195)
T ss_dssp TTHHHHHHHH-TTTSCEEEETHHHHHHHHH
T ss_pred hHHHHHHHHh-cCCCcEEEEehHHHHHHHH
Confidence 2456888875 7899999999999999987
No 91
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.58 E-value=0.00021 Score=63.27 Aligned_cols=93 Identities=19% Similarity=0.314 Sum_probs=62.8
Q ss_pred EEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEE
Q 016237 204 ILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALV 283 (392)
Q Consensus 204 v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~vi 283 (392)
+-+++...............|+..|.++.++-.+.+ + .+.+ ...++|.||
T Consensus 13 ~~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~----------------------------~-~~~~-~l~~~Dgli 62 (239)
T 1o1y_A 13 VRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKG----------------------------E-KLER-PLEEYSLVV 62 (239)
T ss_dssp CEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGT----------------------------C-CCSS-CGGGCSEEE
T ss_pred eEEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcCc----------------------------c-cccc-chhcCCEEE
Confidence 334444444444677888999999988776533200 0 0111 123689999
Q ss_pred EcCCCChhh----ccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 284 VPGGRAPEY----LALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 284 ipgg~~~~~----~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
+|||....+ .+.-..+.++|+++.++++|+.+||.|.++|+.+
T Consensus 63 l~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~a 109 (239)
T 1o1y_A 63 LLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKV 109 (239)
T ss_dssp ECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred ECCCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHH
Confidence 999874211 1222468899999999999999999999999987
No 92
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.55 E-value=0.00015 Score=64.34 Aligned_cols=93 Identities=16% Similarity=0.133 Sum_probs=63.1
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
.||+|+-...+ .........|++.|.++.++-.+.. + .+.+ ....+|+
T Consensus 13 ~~~~~i~~~~~--~~~~~i~~~l~~~G~~v~v~~~~~~----------------------------~-~~~~-~l~~~Dg 60 (239)
T 1o1y_A 13 VRVLAIRHVEI--EDLGMMEDIFREKNWSFDYLDTPKG----------------------------E-KLER-PLEEYSL 60 (239)
T ss_dssp CEEEEECSSTT--SSCTHHHHHHHHTTCEEEEECGGGT----------------------------C-CCSS-CGGGCSE
T ss_pred eEEEEEECCCC--CCchHHHHHHHhCCCcEEEeCCcCc----------------------------c-cccc-chhcCCE
Confidence 35666654444 4566788999999998876543210 0 0111 1237999
Q ss_pred EEEcCCCC-ccc---ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 89 LVIPGGRA-PEY---LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 89 iiipGG~~-~~~---~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
||+|||.. +.. ...-..+.++|+++.++++|+.+||-|.++|+.+
T Consensus 61 lil~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~a 109 (239)
T 1o1y_A 61 VVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKV 109 (239)
T ss_dssp EEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred EEECCCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHH
Confidence 99999963 211 1111357899999999999999999999999986
No 93
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.55 E-value=0.00017 Score=67.99 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=64.8
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
+||+++=+ |+. ....+.|.++|.++.++..+. +.+++...++|.
T Consensus 191 ~~V~viD~-G~k----~ni~r~L~~~G~~v~vvp~~~-------------------------------~~e~i~~~~~DG 234 (379)
T 1a9x_B 191 FHVVAYDF-GAK----RNILRMLVDRGCRLTIVPAQT-------------------------------SAEDVLKMNPDG 234 (379)
T ss_dssp EEEEEEES-SCC----HHHHHHHHHTTEEEEEEETTC-------------------------------CHHHHHTTCCSE
T ss_pred CEEEEEEC-CCh----HHHHHHHHHCCCEEEEEeccC-------------------------------CHHHHhhcCCCE
Confidence 47877776 554 457889999999988874431 111221236999
Q ss_pred EEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 89 LVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 89 iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
||++||.+... ......++|+++.++++||.+||.|.++|+.+
T Consensus 235 liLsGGPgdp~--~~~~~~~~Ir~~~~~~~PILGIClG~QLLa~A 277 (379)
T 1a9x_B 235 IFLSNGPGDPA--PCDYAITAIQKFLETDIPVFGICLGHQLLALA 277 (379)
T ss_dssp EEECCCSBCST--TCHHHHHHHHHHTTSCCCEEEETHHHHHHHHH
T ss_pred EEEeCCCCChH--HHHHHHHHHHHHHHcCCCEEEECchHHHHHHH
Confidence 99999975322 34678899999999999999999999999975
No 94
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.53 E-value=8.1e-05 Score=65.47 Aligned_cols=49 Identities=27% Similarity=0.508 Sum_probs=40.4
Q ss_pred CcCEEEEcCCCChh--hccCC--hHHHHHHHHHHHc-CCcEEEEehHHHHHHHc
Q 016237 278 GYDALVVPGGRAPE--YLALN--ENVIALVKDFMEA-KKPVASICHGQQILAAA 326 (392)
Q Consensus 278 ~~D~viipgg~~~~--~~~~~--~~l~~~l~~~~~~-g~~i~aiC~G~~~La~a 326 (392)
++|.||+|||.... .+..+ ..+.++|+++.++ ++||.+||.|.++|+.+
T Consensus 43 ~~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~ 96 (227)
T 2abw_A 43 LCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKN 96 (227)
T ss_dssp TCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEE
T ss_pred cCCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHH
Confidence 58999999987421 23333 5789999999999 99999999999999986
No 95
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=97.48 E-value=5.2e-05 Score=65.86 Aligned_cols=88 Identities=17% Similarity=0.211 Sum_probs=57.4
Q ss_pred CCccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCc
Q 016237 200 SDKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGY 279 (392)
Q Consensus 200 ~~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 279 (392)
|.++|+|+=+-.- -+......|++.|++++++.. ...+ .++
T Consensus 1 M~~~I~iiD~g~~---n~~si~~al~~~G~~~~v~~~-------------------------------~~~l-----~~~ 41 (211)
T 4gud_A 1 MTQNVVIIDTGCA---NISSVKFAIERLGYAVTISRD-------------------------------PQVV-----LAA 41 (211)
T ss_dssp --CCEEEECCCCT---THHHHHHHHHHTTCCEEEECC-------------------------------HHHH-----HHC
T ss_pred CCCEEEEEECCCC---hHHHHHHHHHHCCCEEEEECC-------------------------------HHHH-----hCC
Confidence 3456777654332 356678889999988776521 0012 257
Q ss_pred CEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 280 DALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 280 D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
|.||+||+..+...........+++...+.++||.+||.|-++|+.+
T Consensus 42 D~lilPG~g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~ 88 (211)
T 4gud_A 42 DKLFLPGVGTASEAMKNLTERDLIELVKRVEKPLLGICLGMQLLGKL 88 (211)
T ss_dssp SEEEECCCSCHHHHHHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSE
T ss_pred CEEEECCCCCHHHHHHHHHhcChHHHHHHcCCCEEEEchhHhHHHHH
Confidence 99999986554322112222345677788999999999999999876
No 96
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=97.44 E-value=0.0002 Score=60.81 Aligned_cols=81 Identities=22% Similarity=0.366 Sum_probs=55.7
Q ss_pred cEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEE
Q 016237 203 RILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDAL 282 (392)
Q Consensus 203 ~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~v 282 (392)
+|+++-..+ .+....+.|+++|+++.+++.. ++ ..++|.|
T Consensus 2 ~i~vl~~~g----~~~~~~~~l~~~G~~~~~~~~~----------------------------------~~--~~~~dgl 41 (186)
T 2ywj_A 2 IIGVLAIQG----DVEEHEEAIKKAGYEAKKVKRV----------------------------------ED--LEGIDAL 41 (186)
T ss_dssp EEEEECSSS----CCHHHHHHHHHTTSEEEEECSG----------------------------------GG--GTTCSEE
T ss_pred EEEEEecCc----chHHHHHHHHHCCCEEEEECCh----------------------------------HH--hccCCEE
Confidence 566665432 3455679999999887766420 01 2368999
Q ss_pred EEcCCCChhh--ccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 283 VVPGGRAPEY--LALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 283 iipgg~~~~~--~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
++|||.+... +.....+.++++ ++++||.+||.|.++|+.+
T Consensus 42 il~GG~~~~~~~~~~~~~~~~~i~---~~~~PilGIC~G~Qll~~~ 84 (186)
T 2ywj_A 42 IIPGGESTAIGKLMKKYGLLEKIK---NSNLPILGTCAGMVLLSKG 84 (186)
T ss_dssp EECCSCHHHHHHHHHHTTHHHHHH---TCCCCEEEETHHHHHHSSC
T ss_pred EECCCCchhhhhhhhccCHHHHHH---hcCCcEEEECHHHHHHHHH
Confidence 9999976322 222234556665 7899999999999999987
No 97
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=97.41 E-value=0.00025 Score=61.05 Aligned_cols=51 Identities=25% Similarity=0.458 Sum_probs=38.8
Q ss_pred CCcCEEEEcCCCChhh-cc--CChHHHHHHHHHHHcCCcEEEEehHHHHHHHcC
Q 016237 277 SGYDALVVPGGRAPEY-LA--LNENVIALVKDFMEAKKPVASICHGQQILAAAG 327 (392)
Q Consensus 277 ~~~D~viipgg~~~~~-~~--~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ag 327 (392)
.++|.||+||+..+.. .. .+..+.++|+++.++++||.+||.|.++|+.+.
T Consensus 41 ~~~dglilpG~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~ 94 (201)
T 1gpw_B 41 DLYDLLFIPGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEES 94 (201)
T ss_dssp SCCSEEEECCCSCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEE
T ss_pred cCCCEEEECCCCcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhh
Confidence 4689999999533211 11 112377899999999999999999999999874
No 98
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=97.41 E-value=3.9e-05 Score=67.09 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=54.4
Q ss_pred CEEEEEecC-CCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 9 RSVLLLCGD-YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 9 ~kI~ill~~-g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
+||+||=+. ++. ..+...|+++|.++.++..+.. .+++...+||
T Consensus 25 ~~I~iiD~g~~~~----~~i~~~l~~~G~~~~vv~~~~~-------------------------------~~~l~~~~~d 69 (218)
T 2vpi_A 25 GAVVILDAGAQYG----KVIDRRVRELFVQSEIFPLETP-------------------------------AFAIKEQGFR 69 (218)
T ss_dssp TCEEEEECSTTTT----HHHHHHHHHTTCCEEEECTTCC-------------------------------HHHHHHHTCS
T ss_pred CeEEEEECCCchH----HHHHHHHHHCCCEEEEEECCCC-------------------------------hHHHhhcCCC
Confidence 589998653 442 4677889999999888765421 1122223699
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+|++|||.+...-...+ .+.+++.++++|+.+||.|.++|+.+
T Consensus 70 glil~Gg~~~~~~~~~~---~~~~~~~~~~~PilGIC~G~Qll~~~ 112 (218)
T 2vpi_A 70 AIIISGGPNSVYAEDAP---WFDPAIFTIGKPVLGICYGMQMMNKV 112 (218)
T ss_dssp EEEEEC---------CC---CCCGGGGTSSCCEEEETHHHHHHHHH
T ss_pred EEEECCCCcccccccch---hHHHHHHHcCCCEEEEcHHHHHHHHH
Confidence 99999996422101111 12234456899999999999999974
No 99
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=97.40 E-value=8.8e-05 Score=64.10 Aligned_cols=97 Identities=18% Similarity=0.153 Sum_probs=65.9
Q ss_pred CCEEEEEecC-CCC--ccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC
Q 016237 8 KRSVLLLCGD-YME--DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS 84 (392)
Q Consensus 8 ~~kI~ill~~-g~~--~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (392)
.+||+|+-+- +.. ..-+.....+|++.|+++..+...... ++...+. ..
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~--------------------------~~~~~~~--l~ 78 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATES--------------------------LGEITTK--LR 78 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSC--------------------------HHHHHHH--HH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCC--------------------------hHHHHHH--HH
Confidence 4788888752 211 123456778888899888776543110 0000111 22
Q ss_pred CccEEEEcCCCCc--ccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhc
Q 016237 85 KYDGLVIPGGRAP--EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 132 (392)
Q Consensus 85 ~~D~iiipGG~~~--~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ 132 (392)
+.|+|++|||... ........+.+.|++++++|++++++|.|+.+|++
T Consensus 79 ~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~~ 128 (206)
T 3l4e_A 79 KNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSP 128 (206)
T ss_dssp HSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTSS
T ss_pred hCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhcc
Confidence 6899999998643 22445677899999999999999999999999975
No 100
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.40 E-value=0.00031 Score=61.00 Aligned_cols=87 Identities=22% Similarity=0.266 Sum_probs=57.0
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
|+||+++=+.+-. .....+.|+++|.++.++..+. ..+++. ++|
T Consensus 13 ~~~i~~id~~~~~---~~~~~~~l~~~G~~~~vv~~~~-------------------------------~~~~l~--~~D 56 (212)
T 2a9v_A 13 MLKIYVVDNGGQW---THREWRVLRELGVDTKIVPNDI-------------------------------DSSELD--GLD 56 (212)
T ss_dssp CCBEEEEEESCCT---TCHHHHHHHHTTCBCCEEETTS-------------------------------CGGGGT--TCS
T ss_pred cceEEEEeCCCcc---HHHHHHHHHHCCCEEEEEeCCC-------------------------------CHHHHh--CCC
Confidence 5688887753322 3356788888998777665431 123332 499
Q ss_pred EEEEcCC-CCccc-ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGG-RAPEY-LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG-~~~~~-~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+|||||| .+... ....+.+.++ ..++++|+.+||.|.++|+.+
T Consensus 57 glIl~GG~p~~~~~~~~~~~l~~~---~~~~~~PiLGIC~G~Qll~~~ 101 (212)
T 2a9v_A 57 GLVLSGGAPNIDEELDKLGSVGKY---IDDHNYPILGICVGAQFIALH 101 (212)
T ss_dssp EEEEEEECSCGGGTGGGHHHHHHH---HHHCCSCEEEETHHHHHHHHH
T ss_pred EEEECCCCCCCCcccccchhHHHH---HHhCCCCEEEEChHHHHHHHH
Confidence 9999999 54322 1122334444 357899999999999999976
No 101
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.32 E-value=0.00051 Score=64.74 Aligned_cols=87 Identities=22% Similarity=0.273 Sum_probs=62.9
Q ss_pred ccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCE
Q 016237 202 KRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDA 281 (392)
Q Consensus 202 ~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 281 (392)
.++.++-+ ++. ....+.|.+.|+++.++..+. ..+++...++|.
T Consensus 191 ~~V~viD~-G~k----~ni~r~L~~~G~~v~vvp~~~-------------------------------~~e~i~~~~~DG 234 (379)
T 1a9x_B 191 FHVVAYDF-GAK----RNILRMLVDRGCRLTIVPAQT-------------------------------SAEDVLKMNPDG 234 (379)
T ss_dssp EEEEEEES-SCC----HHHHHHHHHTTEEEEEEETTC-------------------------------CHHHHHTTCCSE
T ss_pred CEEEEEEC-CCh----HHHHHHHHHCCCEEEEEeccC-------------------------------CHHHHhhcCCCE
Confidence 35665555 333 457888999999888874421 011111136899
Q ss_pred EEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 282 LVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 282 viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
||++||++... ......++|+++.++++||.+||.|.++|+.+
T Consensus 235 liLsGGPgdp~--~~~~~~~~Ir~~~~~~~PILGIClG~QLLa~A 277 (379)
T 1a9x_B 235 IFLSNGPGDPA--PCDYAITAIQKFLETDIPVFGICLGHQLLALA 277 (379)
T ss_dssp EEECCCSBCST--TCHHHHHHHHHHTTSCCCEEEETHHHHHHHHH
T ss_pred EEEeCCCCChH--HHHHHHHHHHHHHHcCCCEEEECchHHHHHHH
Confidence 99999987322 34778899999999999999999999999987
No 102
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=97.29 E-value=8.5e-05 Score=65.41 Aligned_cols=50 Identities=10% Similarity=0.122 Sum_probs=41.1
Q ss_pred CccEEEEcCCCCcc--cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCc
Q 016237 85 KYDGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD 134 (392)
Q Consensus 85 ~~D~iiipGG~~~~--~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ag 134 (392)
+.|+|++|||.... .......+.+.|++++++|++++++|.|+.+|++..
T Consensus 79 ~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~~~~ 130 (229)
T 1fy2_A 79 KAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTI 130 (229)
T ss_dssp HCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTSSBS
T ss_pred cCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhcccc
Confidence 68999999987432 234456788999999999999999999999999854
No 103
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.24 E-value=0.00037 Score=69.45 Aligned_cols=89 Identities=21% Similarity=0.167 Sum_probs=62.8
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
|++|+|+-+. ...+....+.|+++|+++.++.... + .. ...+|
T Consensus 4 m~~I~Iid~~---~g~~~~~~~~l~~~G~~~~vv~~~~-----------------------------~---~~--l~~~D 46 (555)
T 1jvn_A 4 MPVVHVIDVE---SGNLQSLTNAIEHLGYEVQLVKSPK-----------------------------D---FN--ISGTS 46 (555)
T ss_dssp SCEEEEECCS---CSCCHHHHHHHHHTTCEEEEESSGG-----------------------------G---CC--STTCS
T ss_pred CCEEEEEECC---CCCHHHHHHHHHHCCCEEEEECCcc-----------------------------c---cc--cccCC
Confidence 4589999764 1244567889999999888865310 0 11 23699
Q ss_pred EEEEcCCCCccc---ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPEY---LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~~---~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
.||+|||..... ...+..+.++|+++.++++|+.+||.|.++|+.+
T Consensus 47 glILpGgG~~~~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a 95 (555)
T 1jvn_A 47 RLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAG 95 (555)
T ss_dssp CEEEEECSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEE
T ss_pred EEEECCCCchHhHhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhh
Confidence 999999533221 1112346789999999999999999999999985
No 104
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=97.17 E-value=0.00075 Score=60.29 Aligned_cols=78 Identities=27% Similarity=0.302 Sum_probs=54.4
Q ss_pred HHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEEEcCCCCc--ccc---
Q 016237 26 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLVIPGGRAP--EYL--- 100 (392)
Q Consensus 26 ~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~iiipGG~~~--~~~--- 100 (392)
...+.+.++|..+.++.+... ..+.+. .+.+|+|+++||.+. ...
T Consensus 32 ~~~~~l~~aG~~pv~lp~~~~-----------------------------~~~~~~-l~~~DGlil~GG~~v~P~~yg~~ 81 (254)
T 3fij_A 32 RYVDAIQKVGGFPIALPIDDP-----------------------------STAVQA-ISLVDGLLLTGGQDITPQLYLEE 81 (254)
T ss_dssp HHHHHHHHHTCEEEEECCCCG-----------------------------GGHHHH-HHTCSEEEECCCSCCCGGGGTCC
T ss_pred HHHHHHHHCCCEEEEEeCCCc-----------------------------hHHHHH-HhhCCEEEECCCCCCChhhcCCc
Confidence 456778889988887765421 001110 236999999999541 110
Q ss_pred ----------cCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 101 ----------AMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 101 ----------~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
..+...+.+++++.++++||.+||.|.++|+.+
T Consensus 82 ~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a 124 (254)
T 3fij_A 82 PSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVA 124 (254)
T ss_dssp CCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred cCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 112337899999999999999999999999976
No 105
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.15 E-value=0.0014 Score=56.91 Aligned_cols=87 Identities=21% Similarity=0.248 Sum_probs=55.4
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
|+++.++-+.+.. .....+.|+++|.++.++..+. ..+++ .++|
T Consensus 13 ~~~i~~id~~~~~---~~~~~~~l~~~G~~~~vv~~~~-------------------------------~~~~l--~~~D 56 (212)
T 2a9v_A 13 MLKIYVVDNGGQW---THREWRVLRELGVDTKIVPNDI-------------------------------DSSEL--DGLD 56 (212)
T ss_dssp CCBEEEEEESCCT---TCHHHHHHHHTTCBCCEEETTS-------------------------------CGGGG--TTCS
T ss_pred cceEEEEeCCCcc---HHHHHHHHHHCCCEEEEEeCCC-------------------------------CHHHH--hCCC
Confidence 5566666544333 4457788888887766654320 12222 2489
Q ss_pred EEEEcCC-CChhh-ccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGG-RAPEY-LALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg-~~~~~-~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.|||||| .+... ....+.+.++ ..++++|+.+||.|.++|+.+
T Consensus 57 glIl~GG~p~~~~~~~~~~~l~~~---~~~~~~PiLGIC~G~Qll~~~ 101 (212)
T 2a9v_A 57 GLVLSGGAPNIDEELDKLGSVGKY---IDDHNYPILGICVGAQFIALH 101 (212)
T ss_dssp EEEEEEECSCGGGTGGGHHHHHHH---HHHCCSCEEEETHHHHHHHHH
T ss_pred EEEECCCCCCCCcccccchhHHHH---HHhCCCCEEEEChHHHHHHHH
Confidence 9999999 55322 1112333333 357899999999999999987
No 106
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=97.14 E-value=0.00024 Score=62.53 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=40.8
Q ss_pred CcCEEEEcCCCChh--hccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcC
Q 016237 278 GYDALVVPGGRAPE--YLALNENVIALVKDFMEAKKPVASICHGQQILAAAG 327 (392)
Q Consensus 278 ~~D~viipgg~~~~--~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ag 327 (392)
++|.||+|||.... .......+.+.|++++++|+|+.++|.|.++|++..
T Consensus 79 ~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~~~~ 130 (229)
T 1fy2_A 79 KAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTI 130 (229)
T ss_dssp HCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTSSBS
T ss_pred cCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhcccc
Confidence 57999999976532 234456788999999999999999999999998753
No 107
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=97.06 E-value=0.00021 Score=61.74 Aligned_cols=98 Identities=16% Similarity=0.116 Sum_probs=66.3
Q ss_pred CccEEEEeCCCC---CcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCC
Q 016237 201 DKRILFLCGDYM---EDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVS 277 (392)
Q Consensus 201 ~~~v~ill~~~~---~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 277 (392)
.+++.++-+-.- ...-+......|++.|++++.+..... ..+...+. ..
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~--------------------------~~~~~~~~--l~ 78 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATE--------------------------SLGEITTK--LR 78 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTS--------------------------CHHHHHHH--HH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCC--------------------------ChHHHHHH--HH
Confidence 467877764321 112345688899999998877754310 00000111 23
Q ss_pred CcCEEEEcCCCCh--hhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 278 GYDALVVPGGRAP--EYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 278 ~~D~viipgg~~~--~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
+.|.|++|||... ........+.+.|++++++|++++++|.|.++|+..
T Consensus 79 ~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~~~ 129 (206)
T 3l4e_A 79 KNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPN 129 (206)
T ss_dssp HSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTSSB
T ss_pred hCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhccc
Confidence 5799999998643 223456788999999999999999999999999854
No 108
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=97.03 E-value=0.00056 Score=67.78 Aligned_cols=89 Identities=16% Similarity=0.160 Sum_probs=56.7
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
..||+||=+-. . -...+...|+++|..++++..+. +.+++....+|
T Consensus 10 ~~~I~IlD~g~-~--~~~~i~r~lr~~Gv~~~i~p~~~-------------------------------~~~~i~~~~~d 55 (527)
T 3tqi_A 10 QHRILILDFGS-Q--YAQLIARRVREIGVYCELMPCDI-------------------------------DEETIRDFNPH 55 (527)
T ss_dssp CSEEEEEECSC-T--THHHHHHHHHHHTCEEEEEETTC-------------------------------CSSSSTTTCCS
T ss_pred CCeEEEEECCC-c--cHHHHHHHHHHCCCeEEEEECCC-------------------------------CHHHHHhcCCC
Confidence 46898886522 2 23567788999999888875432 12222222579
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+||+|||.+... +.......++.++.++||.+||.|.++|+.+
T Consensus 56 gIILsGGp~sv~---~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~ 98 (527)
T 3tqi_A 56 GIILSGGPETVT---LSHTLRAPAFIFEIGCPVLGICYGMQTMAYQ 98 (527)
T ss_dssp EEEECCCCC------------CCCSTTTSSSCEEEETHHHHHHHHH
T ss_pred EEEECCcCcccc---cCCChhhHHHHHhcCCCEEEEChHHHHHHHH
Confidence 999999965221 1222334455677899999999999999864
No 109
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=97.02 E-value=0.00017 Score=62.88 Aligned_cols=89 Identities=17% Similarity=0.243 Sum_probs=53.2
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
.++++++-+.+.. ...+...|+++|.++.++..+.. .+++...++|
T Consensus 24 ~~~I~iiD~g~~~---~~~i~~~l~~~G~~~~vv~~~~~-------------------------------~~~l~~~~~d 69 (218)
T 2vpi_A 24 EGAVVILDAGAQY---GKVIDRRVRELFVQSEIFPLETP-------------------------------AFAIKEQGFR 69 (218)
T ss_dssp TTCEEEEECSTTT---THHHHHHHHHTTCCEEEECTTCC-------------------------------HHHHHHHTCS
T ss_pred CCeEEEEECCCch---HHHHHHHHHHCCCEEEEEECCCC-------------------------------hHHHhhcCCC
Confidence 3577777554333 24677888999988887755310 1111113689
Q ss_pred EEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.|++|||.+...-.... .+.++..++++|+.+||.|.++|+.+
T Consensus 70 glil~Gg~~~~~~~~~~---~~~~~~~~~~~PilGIC~G~Qll~~~ 112 (218)
T 2vpi_A 70 AIIISGGPNSVYAEDAP---WFDPAIFTIGKPVLGICYGMQMMNKV 112 (218)
T ss_dssp EEEEEC---------CC---CCCGGGGTSSCCEEEETHHHHHHHHH
T ss_pred EEEECCCCcccccccch---hHHHHHHHcCCCEEEEcHHHHHHHHH
Confidence 99999997532211111 11233456899999999999999986
No 110
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=97.00 E-value=0.00071 Score=61.66 Aligned_cols=46 Identities=20% Similarity=0.216 Sum_probs=40.1
Q ss_pred CcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 278 GYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 278 ~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
++|.||+|||++...+ +.+.++++++.++++||.+||.|.++|+.+
T Consensus 90 ~~dgiil~GG~~~~~~---~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a 135 (289)
T 2v4u_A 90 KADGILVPGGFGIRGT---LGKLQAISWARTKKIPFLGVXLGMQLAVIE 135 (289)
T ss_dssp HCSEEEECSCCSSTTH---HHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hCCEEEecCCCCchhH---HHHHHHHHHHHHcCCcEEEECccHHHHHHH
Confidence 6899999999875332 578899999999999999999999999974
No 111
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=96.81 E-value=0.0011 Score=60.48 Aligned_cols=46 Identities=15% Similarity=0.207 Sum_probs=39.7
Q ss_pred CccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 85 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 85 ~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
++|+||||||.+...+ ..+.++++++.++++||.+||.|.++|+.+
T Consensus 90 ~~dgiil~GG~~~~~~---~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a 135 (289)
T 2v4u_A 90 KADGILVPGGFGIRGT---LGKLQAISWARTKKIPFLGVXLGMQLAVIE 135 (289)
T ss_dssp HCSEEEECSCCSSTTH---HHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hCCEEEecCCCCchhH---HHHHHHHHHHHHcCCcEEEECccHHHHHHH
Confidence 6899999999765322 578899999999999999999999999974
No 112
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.79 E-value=0.0031 Score=62.78 Aligned_cols=92 Identities=16% Similarity=0.177 Sum_probs=59.7
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
..||+||=+-. .-.......|++.|..++++..+. +++++...++|
T Consensus 7 ~~~IlilD~Gs---~~~~~I~r~lre~Gv~~eiv~~~~-------------------------------~~~~i~~~~~d 52 (556)
T 3uow_A 7 YDKILVLNFGS---QYFHLIVKRLNNIKIFSETKDYGV-------------------------------ELKDIKDMNIK 52 (556)
T ss_dssp CCEEEEEESSC---TTHHHHHHHHHHTTCCEEEEETTC-------------------------------CGGGTTTSCEE
T ss_pred CCEEEEEECCC---ccHHHHHHHHHHCCCeEEEEECCC-------------------------------CHHHHhhcCCC
Confidence 35787775421 124567788999999888875431 12333333789
Q ss_pred EEEEcCCCCcccccCCHHH-HHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPEYLAMNDSV-IDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l-~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+||+|||.+.......+.+ ..+++.+.++++|+.+||.|.++|+.+
T Consensus 53 gIIlsGGp~s~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~ 99 (556)
T 3uow_A 53 GVILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQ 99 (556)
T ss_dssp EEEECCCSCCTTSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred EEEECCCCCcccccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHH
Confidence 9999999753221111222 234455567799999999999999975
No 113
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=96.72 E-value=0.0015 Score=60.20 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=60.9
Q ss_pred CEEEEEecCCCCc--------cchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCC
Q 016237 9 RSVLLLCGDYMED--------YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDE 80 (392)
Q Consensus 9 ~kI~ill~~g~~~--------~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (392)
..|+|+...+... .-.....+.|+++|.++.++.....+ ..+.+
T Consensus 31 P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~~----------------------------~~i~~ 82 (315)
T 1l9x_A 31 PIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTE----------------------------KDYEI 82 (315)
T ss_dssp CEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCCH----------------------------HHHHH
T ss_pred CEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCCH----------------------------HHHHH
Confidence 5799987643211 12234678999999998887654210 00111
Q ss_pred CCCCCccEEEEcCCCC-cccc---cCCHHHHHHHHHHHhCC--CeEEEEchhhHHhhcC
Q 016237 81 IDPSKYDGLVIPGGRA-PEYL---AMNDSVIDLVRKFSNSG--KTIASICHGQLILAAA 133 (392)
Q Consensus 81 ~~~~~~D~iiipGG~~-~~~~---~~~~~l~~~l~~~~~~~--~~i~aic~G~~~La~a 133 (392)
. ...+|+||+|||.+ +... .....+.+++++..+++ +||.+||.|.++|+.+
T Consensus 83 ~-l~~~dglil~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a 140 (315)
T 1l9x_A 83 L-FKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLL 140 (315)
T ss_dssp H-HHHSSEEEECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHH
T ss_pred H-HhcCCEEEEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHH
Confidence 0 13689999999963 2211 01135677777776664 9999999999999875
No 114
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.70 E-value=0.0047 Score=61.46 Aligned_cols=91 Identities=18% Similarity=0.234 Sum_probs=58.7
Q ss_pred ccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCE
Q 016237 202 KRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDA 281 (392)
Q Consensus 202 ~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 281 (392)
.+|+|+-+-.- -.......+++.|..++++..+. ..+++...++|.
T Consensus 8 ~~IlilD~Gs~---~~~~I~r~lre~Gv~~eiv~~~~-------------------------------~~~~i~~~~~dg 53 (556)
T 3uow_A 8 DKILVLNFGSQ---YFHLIVKRLNNIKIFSETKDYGV-------------------------------ELKDIKDMNIKG 53 (556)
T ss_dssp CEEEEEESSCT---THHHHHHHHHHTTCCEEEEETTC-------------------------------CGGGTTTSCEEE
T ss_pred CEEEEEECCCc---cHHHHHHHHHHCCCeEEEEECCC-------------------------------CHHHHhhcCCCE
Confidence 45666554322 24567788889998888775431 122332336899
Q ss_pred EEEcCCCChhhccCChHHH-HHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 282 LVVPGGRAPEYLALNENVI-ALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 282 viipgg~~~~~~~~~~~l~-~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
||+|||++...-...+.+. .+++.+.++++|+.+||.|.++|+.+
T Consensus 54 IIlsGGp~s~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~ 99 (556)
T 3uow_A 54 VILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQ 99 (556)
T ss_dssp EEECCCSCCTTSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred EEECCCCCcccccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHH
Confidence 9999998643211112222 33444567799999999999999987
No 115
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=96.67 E-value=0.0059 Score=61.69 Aligned_cols=89 Identities=19% Similarity=0.281 Sum_probs=61.8
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
.|+|+|+=+ ++ .=...+...|++.|+++.++..+.. ....+||
T Consensus 446 Gk~IlviD~--gd-sf~~~l~~~l~~~G~~v~Vv~~d~~----------------------------------~~~~~~D 488 (645)
T 3r75_A 446 GCRALIVDA--ED-HFTAMIAQQLSSLGLATEVCGVHDA----------------------------------VDLARYD 488 (645)
T ss_dssp TCEEEEEES--SC-THHHHHHHHHHHTTCEEEEEETTCC----------------------------------CCGGGCS
T ss_pred CCEEEEEEC--Cc-cHHHHHHHHHHHCCCEEEEEECCCc----------------------------------ccccCCC
Confidence 467766643 22 1234577888899999988754420 0123689
Q ss_pred EEEEcCCCCcccccCC---HHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPEYLAMN---DSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~---~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
.|||+||.+...-..+ ..+.++|+++.++++|+.+||-|.++|+.+
T Consensus 489 gIIlsGGPg~p~d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~a 537 (645)
T 3r75_A 489 VVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAI 537 (645)
T ss_dssp EEEECCCSSCTTCTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred EEEECCCCCChhhhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
Confidence 9999999764321222 246788899999999999999999999864
No 116
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=96.56 E-value=0.0024 Score=57.62 Aligned_cols=45 Identities=22% Similarity=0.273 Sum_probs=38.4
Q ss_pred CcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHH
Q 016237 278 GYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAA 325 (392)
Q Consensus 278 ~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ 325 (392)
++|.|++|||++... .+...++++++.++++|+.+||.|.++|+.
T Consensus 67 ~~dgiil~GG~~~~~---~~~~~~~i~~~~~~~~PilGIC~G~Qll~~ 111 (273)
T 2w7t_A 67 GCDGIFVPGGFGNRG---VDGKCAAAQVARMNNIPYFGVXLGMQVAVI 111 (273)
T ss_dssp TCSEEEECCCCTTTT---HHHHHHHHHHHHHHTCCEEEETHHHHHHHH
T ss_pred hCCEEEecCCCCCcC---chhHHHHHHHHHHCCCcEEEECcCHHHHHH
Confidence 689999999987532 335778999999999999999999999986
No 117
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.48 E-value=0.0032 Score=62.73 Aligned_cols=89 Identities=19% Similarity=0.253 Sum_probs=61.9
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
|++|.++-+.. ..+....+.|+++|+++.++... . + . ...++|
T Consensus 4 m~~I~Iid~~~---g~~~~~~~~l~~~G~~~~vv~~~--------------------~---------~---~--~l~~~D 46 (555)
T 1jvn_A 4 MPVVHVIDVES---GNLQSLTNAIEHLGYEVQLVKSP--------------------K---------D---F--NISGTS 46 (555)
T ss_dssp SCEEEEECCSC---SCCHHHHHHHHHTTCEEEEESSG--------------------G---------G---C--CSTTCS
T ss_pred CCEEEEEECCC---CCHHHHHHHHHHCCCEEEEECCc--------------------c---------c---c--ccccCC
Confidence 46777776531 23456788899999888876431 0 0 1 123689
Q ss_pred EEEEcCCCChhh-c--cCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAPEY-L--ALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~~~-~--~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.||+|||..+.. . ..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 47 glILpGgG~~~~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a 95 (555)
T 1jvn_A 47 RLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAG 95 (555)
T ss_dssp CEEEEECSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEE
T ss_pred EEEECCCCchHhHhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhh
Confidence 999999533221 1 112346789999999999999999999999986
No 118
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=96.45 E-value=0.0042 Score=55.35 Aligned_cols=79 Identities=24% Similarity=0.336 Sum_probs=55.3
Q ss_pred HHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCCh--hhc--
Q 016237 218 AVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAP--EYL-- 293 (392)
Q Consensus 218 ~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~--~~~-- 293 (392)
...++.++++|..+.++.+... ..+.+ ..+.+|.|+++||.+. ..+
T Consensus 31 ~~~~~~l~~aG~~pv~lp~~~~-----------------------------~~~~~-~l~~~DGlil~GG~~v~P~~yg~ 80 (254)
T 3fij_A 31 QRYVDAIQKVGGFPIALPIDDP-----------------------------STAVQ-AISLVDGLLLTGGQDITPQLYLE 80 (254)
T ss_dssp HHHHHHHHHHTCEEEEECCCCG-----------------------------GGHHH-HHHTCSEEEECCCSCCCGGGGTC
T ss_pred HHHHHHHHHCCCEEEEEeCCCc-----------------------------hHHHH-HHhhCCEEEECCCCCCChhhcCC
Confidence 4467788888988877765311 01111 1236899999999651 111
Q ss_pred -----------cCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 294 -----------ALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 294 -----------~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
..+...+++++++.++++||.+||.|.++|+.+
T Consensus 81 ~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a 124 (254)
T 3fij_A 81 EPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVA 124 (254)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred ccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 112347899999999999999999999999987
No 119
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=96.43 E-value=0.0069 Score=55.32 Aligned_cols=57 Identities=16% Similarity=0.187 Sum_probs=44.6
Q ss_pred cccCCCCCCcCEEEEcCCCC-h---hhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 270 NFESVDVSGYDALVVPGGRA-P---EYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 270 ~~~~~~~~~~D~viipgg~~-~---~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.+++++..+||.+||.|+.- . +..+.-+++.++++...++++++.+||-|.++++.+
T Consensus 103 ~f~~~~~~~~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~ 163 (312)
T 2h2w_A 103 TFSAVKDRKFDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYY 163 (312)
T ss_dssp CGGGTTTCCEEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHH
T ss_pred CcccccccCcCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHH
Confidence 56666667899999999873 1 223444788888988889999999999999995543
No 120
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=96.34 E-value=0.017 Score=58.36 Aligned_cols=76 Identities=25% Similarity=0.357 Sum_probs=56.3
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCChhhccC-
Q 016237 217 VAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAPEYLAL- 295 (392)
Q Consensus 217 ~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~~~~~~- 295 (392)
...+...|++.|++++++..+. + ....++|.|||+||.+...-..
T Consensus 459 ~~~l~~~l~~~G~~v~Vv~~d~-----------------------------~-----~~~~~~DgIIlsGGPg~p~d~~~ 504 (645)
T 3r75_A 459 TAMIAQQLSSLGLATEVCGVHD-----------------------------A-----VDLARYDVVVMGPGPGDPSDAGD 504 (645)
T ss_dssp HHHHHHHHHHTTCEEEEEETTC-----------------------------C-----CCGGGCSEEEECCCSSCTTCTTS
T ss_pred HHHHHHHHHHCCCEEEEEECCC-----------------------------c-----ccccCCCEEEECCCCCChhhhhh
Confidence 4557788888999888875431 0 0123689999999987433111
Q ss_pred --ChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 296 --NENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 296 --~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
-..+.++|+++.+.++||.+||-|.++|+.+
T Consensus 505 p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~a 537 (645)
T 3r75_A 505 PRIARLYAWLRHLIDEGKPFMAVCLSHQILNAI 537 (645)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
Confidence 2346788999999999999999999999987
No 121
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=96.28 E-value=0.0068 Score=55.20 Aligned_cols=57 Identities=18% Similarity=0.297 Sum_probs=43.6
Q ss_pred cccCCCCCCcCEEEEcCCCC-h---hhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 270 NFESVDVSGYDALVVPGGRA-P---EYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 270 ~~~~~~~~~~D~viipgg~~-~---~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.+++++..+||.+||.|+.- . +..+.-+++.++++...++++++.+||-|.++++.+
T Consensus 91 ~f~~~~~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~ 151 (301)
T 2vdj_A 91 TFRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYH 151 (301)
T ss_dssp CHHHHTTSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHH
T ss_pred CcccccccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHH
Confidence 45555556899999999873 1 223444788889998889999999999999995443
No 122
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=96.26 E-value=0.0069 Score=55.34 Aligned_cols=56 Identities=16% Similarity=0.250 Sum_probs=41.9
Q ss_pred CcCCCCCCCccEEEEcCCCC-cc---cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhc
Q 016237 77 TFDEIDPSKYDGLVIPGGRA-PE---YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 132 (392)
Q Consensus 77 ~~~~~~~~~~D~iiipGG~~-~~---~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ 132 (392)
++++++...||++||.|+.- .. ....=+++.++++...++++++.+||-|.++++.
T Consensus 103 ~f~~~~~~~~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~ 162 (312)
T 2h2w_A 103 TFSAVKDRKFDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLY 162 (312)
T ss_dssp CGGGTTTCCEEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHH
T ss_pred CcccccccCcCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHH
Confidence 35555566899999999862 21 1222267888888888999999999999998543
No 123
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=96.23 E-value=0.0042 Score=56.03 Aligned_cols=46 Identities=15% Similarity=0.190 Sum_probs=38.4
Q ss_pred CccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 85 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 85 ~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
.+|.|++|||.+... .+...++++++.++++|+.+||.|.++|+.+
T Consensus 67 ~~dgiil~GG~~~~~---~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a 112 (273)
T 2w7t_A 67 GCDGIFVPGGFGNRG---VDGKCAAAQVARMNNIPYFGVXLGMQVAVIE 112 (273)
T ss_dssp TCSEEEECCCCTTTT---HHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred hCCEEEecCCCCCcC---chhHHHHHHHHHHCCCcEEEECcCHHHHHHH
Confidence 689999999976432 2357788999988999999999999999863
No 124
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=96.22 E-value=0.006 Score=60.37 Aligned_cols=88 Identities=17% Similarity=0.170 Sum_probs=55.0
Q ss_pred ccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCE
Q 016237 202 KRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDA 281 (392)
Q Consensus 202 ~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 281 (392)
.+|+|+-+..- -...+...+++.|..++++..+. ..+++....+|.
T Consensus 11 ~~I~IlD~g~~---~~~~i~r~lr~~Gv~~~i~p~~~-------------------------------~~~~i~~~~~dg 56 (527)
T 3tqi_A 11 HRILILDFGSQ---YAQLIARRVREIGVYCELMPCDI-------------------------------DEETIRDFNPHG 56 (527)
T ss_dssp SEEEEEECSCT---THHHHHHHHHHHTCEEEEEETTC-------------------------------CSSSSTTTCCSE
T ss_pred CeEEEEECCCc---cHHHHHHHHHHCCCeEEEEECCC-------------------------------CHHHHHhcCCCE
Confidence 45666655322 23567788899998888875431 112222225799
Q ss_pred EEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 282 LVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 282 viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
||+|||++..+ ++......+...+.++||.+||.|.++|+.+
T Consensus 57 IILsGGp~sv~---~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~ 98 (527)
T 3tqi_A 57 IILSGGPETVT---LSHTLRAPAFIFEIGCPVLGICYGMQTMAYQ 98 (527)
T ss_dssp EEECCCCC------------CCCSTTTSSSCEEEETHHHHHHHHH
T ss_pred EEECCcCcccc---cCCChhhHHHHHhcCCCEEEEChHHHHHHHH
Confidence 99999976422 1222233445667899999999999999987
No 125
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=96.21 E-value=0.0027 Score=62.89 Aligned_cols=89 Identities=15% Similarity=0.167 Sum_probs=56.7
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
.+||+|+=+.+-. ...+...|+++|..+.++..+.. .+++..-.+|
T Consensus 7 ~~~IlIlD~g~~~---~~~i~r~lr~~G~~~~i~p~~~~-------------------------------~~~i~~~~~d 52 (525)
T 1gpm_A 7 KHRILILDFGSQY---TQLVARRVRELGVYCELWAWDVT-------------------------------EAQIRDFNPS 52 (525)
T ss_dssp SSEEEEEECSCTT---HHHHHHHHHHTTCEEEEEESCCC-------------------------------HHHHHHHCCS
T ss_pred CCEEEEEECCCcc---HHHHHHHHHHCCCEEEEEECCCC-------------------------------HHHHhccCCC
Confidence 3689888654322 35577899999998888754311 1122111469
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+||+|||.+.-.-...+.+ .+++.+.++||.+||.|.++|+.+
T Consensus 53 giILsGGp~s~~~~~~~~~---~~~~~~~g~PvLGIC~G~Qlla~~ 95 (525)
T 1gpm_A 53 GIILSGGPESTTEENSPRA---PQYVFEAGVPVFGVCYGMQTMAMQ 95 (525)
T ss_dssp EEEECCCSSCTTSTTCCCC---CGGGGTSSSCEEEETHHHHHHHHH
T ss_pred EEEECCcCccccccCCcch---HHHHHHCCCCEEEEChHHHHHHHH
Confidence 9999999752211111212 244567899999999999999864
No 126
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=96.11 E-value=0.014 Score=49.45 Aligned_cols=80 Identities=19% Similarity=0.179 Sum_probs=47.6
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCChhhccCC
Q 016237 217 VAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAPEYLALN 296 (392)
Q Consensus 217 ~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~~~~~~~ 296 (392)
.....+.|++.|+++.++...... . .....+.. .++|.+|+.||.+... ..
T Consensus 13 ~~~i~~~l~~~G~~~~v~~~~~~~----------------------~--~i~~~l~~---~~~~~iil~gGpg~~~--~~ 63 (192)
T 1i1q_B 13 TWNLADQLRTNGHNVVIYRNHIPA----------------------Q--TLIDRLAT---MKNPVLMLSPGPGVPS--EA 63 (192)
T ss_dssp HHHHHHHHHHTTCEEEEEETTSCS----------------------H--HHHHHHTT---CSSEEEEECCCSSCGG--GS
T ss_pred HHHHHHHHHHCCCeEEEEECCCCH----------------------H--HHHHHhhh---ccCCeEEECCCCcCch--hC
Confidence 345678888999998887653100 0 00001111 1234577777776422 12
Q ss_pred hHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 297 ENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 297 ~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
....+++ +..++++||.+||.|.++|+.+
T Consensus 64 ~~~~~l~-~~~~~~~PilGIC~G~Qll~~~ 92 (192)
T 1i1q_B 64 GCMPELL-TRLRGKLPIIGICLGHQAIVEA 92 (192)
T ss_dssp TTHHHHH-HHHBTTBCEEEETHHHHHHHHH
T ss_pred chHHHHH-HHHhcCCCEEEECcChHHHHHH
Confidence 2233344 4467899999999999999987
No 127
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=96.09 E-value=0.0064 Score=55.34 Aligned_cols=55 Identities=20% Similarity=0.339 Sum_probs=40.7
Q ss_pred cCCCCCCCccEEEEcCCCC-cc---cccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhc
Q 016237 78 FDEIDPSKYDGLVIPGGRA-PE---YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 132 (392)
Q Consensus 78 ~~~~~~~~~D~iiipGG~~-~~---~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ 132 (392)
+++++...||++||.|+.- .. ....=.++.++++...++++++.+||-|.++++.
T Consensus 92 f~~~~~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~ 150 (301)
T 2vdj_A 92 FRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLY 150 (301)
T ss_dssp HHHHTTSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHH
T ss_pred cccccccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHH
Confidence 4444456899999999862 21 1222267888888888999999999999998543
No 128
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=95.92 E-value=0.01 Score=57.72 Aligned_cols=48 Identities=23% Similarity=0.309 Sum_probs=41.4
Q ss_pred CCCcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 276 VSGYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 276 ~~~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
..++|.|++|||+|.. ..+...++++++.++++|+.+||.|.++|+.+
T Consensus 348 L~~~DgIIlpGG~G~~---~~~g~i~~ir~a~~~~~PiLGIClG~Qll~va 395 (535)
T 3nva_A 348 LGNVNGIIVLPGFGSR---GAEGKIKAIKYAREHNIPFLGICFGFQLSIVE 395 (535)
T ss_dssp TTSCSEEEECCCCSST---THHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred ccCCCEEEECCCCCCc---cHHHHHHHHHHHHHcCCcEEEECcchhHHHHH
Confidence 4589999999998753 33678899999999999999999999999866
No 129
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=95.57 E-value=0.028 Score=47.58 Aligned_cols=91 Identities=19% Similarity=0.168 Sum_probs=52.8
Q ss_pred EEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCc-CCCCCCCccE
Q 016237 10 SVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATF-DEIDPSKYDG 88 (392)
Q Consensus 10 kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~D~ 88 (392)
||+|+=. ... =.....+.|++.|.++.++...... + .+ +.+...++|.
T Consensus 2 ~i~iiDn--~~s-~~~~i~~~l~~~G~~~~v~~~~~~~---------------------------~-~i~~~l~~~~~~~ 50 (192)
T 1i1q_B 2 DILLLDN--IDS-FTWNLADQLRTNGHNVVIYRNHIPA---------------------------Q-TLIDRLATMKNPV 50 (192)
T ss_dssp EEEEEEC--SCS-SHHHHHHHHHHTTCEEEEEETTSCS---------------------------H-HHHHHHTTCSSEE
T ss_pred cEEEEEC--Ccc-HHHHHHHHHHHCCCeEEEEECCCCH---------------------------H-HHHHHhhhccCCe
Confidence 6777652 221 1345578889999998887654110 0 01 0001112445
Q ss_pred EEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCc
Q 016237 89 LVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD 134 (392)
Q Consensus 89 iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ag 134 (392)
+|+.||.+... +......+++ ..++++||.+||-|.++|+.+.
T Consensus 51 iil~gGpg~~~--~~~~~~~l~~-~~~~~~PilGIC~G~Qll~~~~ 93 (192)
T 1i1q_B 51 LMLSPGPGVPS--EAGCMPELLT-RLRGKLPIIGICLGHQAIVEAY 93 (192)
T ss_dssp EEECCCSSCGG--GSTTHHHHHH-HHBTTBCEEEETHHHHHHHHHT
T ss_pred EEECCCCcCch--hCchHHHHHH-HHhcCCCEEEECcChHHHHHHh
Confidence 77777765322 1222333444 4678999999999999999863
No 130
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=95.49 E-value=0.021 Score=51.66 Aligned_cols=128 Identities=13% Similarity=0.152 Sum_probs=82.4
Q ss_pred cCceEecCCCCC---hHHHHHHHHHHhcCCcCCCCccEEEEeCCCCCcch-hHHHHHHHHhcCC-eEEEEcCCCCCCCCC
Q 016237 170 DGNIITGATYEG---HPEFIRLFLKALGGTITGSDKRILFLCGDYMEDYE-VAVPFQSLQALEC-HVDAVCPKKKAGDSC 244 (392)
Q Consensus 170 dg~iiT~~g~~s---~~~~~~~~i~~l~~~~~~~~~~v~ill~~~~~~~e-~~~~~~~~~~~~~-~v~~~s~~~~~~~~~ 244 (392)
.|+++--+|... ..++..++++...++ ..++.++.+-.....+ .....+.|++.|+ +++.+......
T Consensus 26 ~g~l~iiGGgedk~~~~~i~~~~v~lagg~----~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~---- 97 (291)
T 3en0_A 26 QPAILIIGGAEDKVHGREILQTFWSRSGGN----DAIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRA---- 97 (291)
T ss_dssp SCCEEEECSSCCSSSCCHHHHHHHHHTTGG----GCEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGG----
T ss_pred CceEEEEECCCCccChHHHHHHHHHHcCCC----CCeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCcc----
Confidence 466766666553 346777888776643 3567777553332222 3446778888898 67776553110
Q ss_pred CCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCChhh--ccCChHHHHHHHHHHHcC-CcEEEEehHHH
Q 016237 245 PTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAPEY--LALNENVIALVKDFMEAK-KPVASICHGQQ 321 (392)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~~~--~~~~~~l~~~l~~~~~~g-~~i~aiC~G~~ 321 (392)
. ..+..+.+ ...+.|+|+|+||.-... ......+.+.|++.+++| .++++.|+|+.
T Consensus 98 ---------------~-----a~~~~~~~-~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~ 156 (291)
T 3en0_A 98 ---------------Q-----GDDSGYRL-FVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAA 156 (291)
T ss_dssp ---------------G-----GGCHHHHH-HHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHH
T ss_pred ---------------c-----cCCHHHHH-HHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHH
Confidence 0 01111111 123679999999875322 466889999999999999 89999999999
Q ss_pred HHHHc
Q 016237 322 ILAAA 326 (392)
Q Consensus 322 ~La~a 326 (392)
++...
T Consensus 157 i~~~~ 161 (291)
T 3en0_A 157 VMGHH 161 (291)
T ss_dssp TTSSE
T ss_pred hhhHh
Confidence 88643
No 131
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=95.47 E-value=0.015 Score=56.43 Aligned_cols=48 Identities=13% Similarity=0.249 Sum_probs=40.4
Q ss_pred CCCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 83 PSKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 83 ~~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
...+|+|++|||.+.. ......++++++.++++|+.+||.|.++|+.+
T Consensus 348 L~~~DgIIlpGG~G~~---~~~g~i~~ir~a~~~~~PiLGIClG~Qll~va 395 (535)
T 3nva_A 348 LGNVNGIIVLPGFGSR---GAEGKIKAIKYAREHNIPFLGICFGFQLSIVE 395 (535)
T ss_dssp TTSCSEEEECCCCSST---THHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred ccCCCEEEECCCCCCc---cHHHHHHHHHHHHHcCCcEEEECcchhHHHHH
Confidence 3479999999998743 23567889999999999999999999999864
No 132
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=95.40 E-value=0.012 Score=54.24 Aligned_cols=79 Identities=16% Similarity=0.230 Sum_probs=52.8
Q ss_pred HHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCC-hhh--c-c
Q 016237 219 VPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRA-PEY--L-A 294 (392)
Q Consensus 219 ~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~-~~~--~-~ 294 (392)
...+.|+++|.++.++..+.. ...+++. ..++|.||+|||.+ +.. . .
T Consensus 56 ~~~~~l~~~G~~~~vv~~~~~----------------------------~~~i~~~-l~~~dglil~GG~~~v~p~~~~~ 106 (315)
T 1l9x_A 56 SYVKYLESAGARVVPVRLDLT----------------------------EKDYEIL-FKSINGILFPGGSVDLRRSDYAK 106 (315)
T ss_dssp HHHHHHHHTTCEEEEECSSCC----------------------------HHHHHHH-HHHSSEEEECCCCCCTTTCHHHH
T ss_pred HHHHHHHHCCCEEEEEecCCC----------------------------HHHHHHH-HhcCCEEEEeCCCcccChhhhhH
Confidence 467889999998888765311 0011110 13689999999974 211 1 1
Q ss_pred CChHHHHHHHHHHHcC--CcEEEEehHHHHHHHc
Q 016237 295 LNENVIALVKDFMEAK--KPVASICHGQQILAAA 326 (392)
Q Consensus 295 ~~~~l~~~l~~~~~~g--~~i~aiC~G~~~La~a 326 (392)
....+.++++++.++| +||.+||.|.++|+.+
T Consensus 107 ~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a 140 (315)
T 1l9x_A 107 VAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLL 140 (315)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHH
Confidence 1245677777777665 8999999999999976
No 133
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=95.35 E-value=0.022 Score=56.02 Aligned_cols=48 Identities=31% Similarity=0.454 Sum_probs=40.4
Q ss_pred CCCcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 276 VSGYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 276 ~~~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
..++|.|++|||+|... .+...++++++.++++|+.+||.|-++|+.+
T Consensus 341 l~~~DGIilsGGpg~~~---~~g~~~~i~~a~~~~~PiLGIClG~Qll~va 388 (545)
T 1s1m_A 341 LKGLDAILVPGGFGYRG---VEGMITTARFARENNIPYLGICLGMQVALID 388 (545)
T ss_dssp TTTCSEEEECCCCSSTT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hhcCCEEEECCCCCCcc---chhhHHHHHHHHHCCCcEEEECChHHHHHHH
Confidence 35799999999987532 3567789999999999999999999999964
No 134
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=95.28 E-value=0.021 Score=56.28 Aligned_cols=47 Identities=28% Similarity=0.351 Sum_probs=39.6
Q ss_pred CCcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 277 SGYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 277 ~~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
..+|.|++|||+|... .+..+++++++.++++|+.+||.|-++|+.+
T Consensus 354 ~~~DGIILpGGfGd~~---~~g~i~~ir~a~e~~iPiLGICLGmQlL~~a 400 (550)
T 1vco_A 354 RDVSGILVPGGFGVRG---IEGKVRAAQYARERKIPYLGICLGLQIAVIE 400 (550)
T ss_dssp TTCSCEEECCCCSSTT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hcCCEEEECCCCCCcc---hhhhHHHHHHHHHCCCcEEEECcCHHHHHHH
Confidence 4789999999987533 2456788999989999999999999999876
No 135
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=95.12 E-value=0.017 Score=52.37 Aligned_cols=50 Identities=18% Similarity=0.400 Sum_probs=41.8
Q ss_pred CccEEEEcCCCCccc--ccCCHHHHHHHHHHHhCC-CeEEEEchhhHHhhcCc
Q 016237 85 KYDGLVIPGGRAPEY--LAMNDSVIDLVRKFSNSG-KTIASICHGQLILAAAD 134 (392)
Q Consensus 85 ~~D~iiipGG~~~~~--~~~~~~l~~~l~~~~~~~-~~i~aic~G~~~La~ag 134 (392)
+.|+|+|+||..... ......+.+.|++.+++| .++++.|.|+.+++..-
T Consensus 110 ~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~~~m 162 (291)
T 3en0_A 110 QCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMGHHM 162 (291)
T ss_dssp HCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTSSEE
T ss_pred cCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhhHhe
Confidence 689999999975322 456778999999999999 89999999999987643
No 136
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=94.83 E-value=0.016 Score=57.21 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=55.3
Q ss_pred ccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCE
Q 016237 202 KRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDA 281 (392)
Q Consensus 202 ~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 281 (392)
++|+|+-+..-. ...+...++++|..+.++..+.. ...+.+. .+|.
T Consensus 8 ~~IlIlD~g~~~---~~~i~r~lr~~G~~~~i~p~~~~----------------------------~~~i~~~---~~dg 53 (525)
T 1gpm_A 8 HRILILDFGSQY---TQLVARRVRELGVYCELWAWDVT----------------------------EAQIRDF---NPSG 53 (525)
T ss_dssp SEEEEEECSCTT---HHHHHHHHHHTTCEEEEEESCCC----------------------------HHHHHHH---CCSE
T ss_pred CEEEEEECCCcc---HHHHHHHHHHCCCEEEEEECCCC----------------------------HHHHhcc---CCCE
Confidence 456666544322 35577889999988888754310 0112222 4699
Q ss_pred EEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 282 LVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 282 viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
||+|||++..+-...+.+ .+...+.++||.+||.|.++|+.+
T Consensus 54 iILsGGp~s~~~~~~~~~---~~~~~~~g~PvLGIC~G~Qlla~~ 95 (525)
T 1gpm_A 54 IILSGGPESTTEENSPRA---PQYVFEAGVPVFGVCYGMQTMAMQ 95 (525)
T ss_dssp EEECCCSSCTTSTTCCCC---CGGGGTSSSCEEEETHHHHHHHHH
T ss_pred EEECCcCccccccCCcch---HHHHHHCCCCEEEEChHHHHHHHH
Confidence 999999863221111111 234457899999999999999986
No 137
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=94.80 E-value=0.036 Score=54.57 Aligned_cols=47 Identities=19% Similarity=0.309 Sum_probs=39.4
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
..+|.|++|||.+... .....++++++.++++|+.+||.|.++|+.+
T Consensus 342 ~~~DGIilsGGpg~~~---~~g~~~~i~~a~~~~~PiLGIClG~Qll~va 388 (545)
T 1s1m_A 342 KGLDAILVPGGFGYRG---VEGMITTARFARENNIPYLGICLGMQVALID 388 (545)
T ss_dssp TTCSEEEECCCCSSTT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hcCCEEEECCCCCCcc---chhhHHHHHHHHHCCCcEEEECChHHHHHHH
Confidence 4799999999986432 2567789999999999999999999999864
No 138
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=94.73 E-value=0.032 Score=54.97 Aligned_cols=47 Identities=17% Similarity=0.279 Sum_probs=38.9
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
..+|.|++|||.|... ....+..++++.++++|+.+||-|.++|+.+
T Consensus 354 ~~~DGIILpGGfGd~~---~~g~i~~ir~a~e~~iPiLGICLGmQlL~~a 400 (550)
T 1vco_A 354 RDVSGILVPGGFGVRG---IEGKVRAAQYARERKIPYLGICLGLQIAVIE 400 (550)
T ss_dssp TTCSCEEECCCCSSTT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hcCCEEEECCCCCCcc---hhhhHHHHHHHHHCCCcEEEECcCHHHHHHH
Confidence 3699999999986432 2456788898888999999999999999865
No 139
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=94.23 E-value=0.033 Score=54.69 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=48.7
Q ss_pred HHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEEEcCCCCcccccCCH
Q 016237 25 MVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLVIPGGRAPEYLAMND 104 (392)
Q Consensus 25 ~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~iiipGG~~~~~~~~~~ 104 (392)
......|+++|..+.++..+.. .+++..-.+|+||+|||.+.-.-...+
T Consensus 13 ~~i~r~l~~~G~~~~i~p~~~~-------------------------------~~~i~~~~~dgiIlsGGp~s~~~~~~~ 61 (503)
T 2ywb_A 13 RLIARRLRELRAFSLILPGDAP-------------------------------LEEVLKHRPQALILSGGPRSVFDPDAP 61 (503)
T ss_dssp HHHHHHHHTTTCCEEEEETTCC-------------------------------HHHHHTTCCSEEEECCCSSCSSCTTCC
T ss_pred HHHHHHHHHCCCEEEEEECCCC-------------------------------HHHHHhcCCCEEEECCCCchhccCCCc
Confidence 5677899999988887744311 112111146999999997522111111
Q ss_pred HHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 105 SVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 105 ~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
.+ .++.++.++||.+||.|.++|+.+
T Consensus 62 ~~---~~~~~~~~~PvLGIC~G~Qlla~~ 87 (503)
T 2ywb_A 62 RP---DPRLFSSGLPLLGICYGMQLLAQE 87 (503)
T ss_dssp CC---CGGGGCSSCCEEEETHHHHHHHHT
T ss_pred ch---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 11 234557899999999999999976
No 140
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=94.13 E-value=0.041 Score=54.05 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=49.0
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCChhhccCC
Q 016237 217 VAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAPEYLALN 296 (392)
Q Consensus 217 ~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~~~~~~~ 296 (392)
.......++++|..+.++..+.. ...+.+. .+|.||+|||++..+-...
T Consensus 12 ~~~i~r~l~~~G~~~~i~p~~~~----------------------------~~~i~~~---~~dgiIlsGGp~s~~~~~~ 60 (503)
T 2ywb_A 12 TRLIARRLRELRAFSLILPGDAP----------------------------LEEVLKH---RPQALILSGGPRSVFDPDA 60 (503)
T ss_dssp HHHHHHHHHTTTCCEEEEETTCC----------------------------HHHHHTT---CCSEEEECCCSSCSSCTTC
T ss_pred HHHHHHHHHHCCCEEEEEECCCC----------------------------HHHHHhc---CCCEEEECCCCchhccCCC
Confidence 35678889999988777744310 0112222 4699999999863221111
Q ss_pred hHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 297 ENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 297 ~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
+.+ .+...+.++||.+||.|.++|+.+
T Consensus 61 ~~~---~~~~~~~~~PvLGIC~G~Qlla~~ 87 (503)
T 2ywb_A 61 PRP---DPRLFSSGLPLLGICYGMQLLAQE 87 (503)
T ss_dssp CCC---CGGGGCSSCCEEEETHHHHHHHHT
T ss_pred cch---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 111 133456899999999999999987
No 141
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=93.95 E-value=0.014 Score=59.51 Aligned_cols=89 Identities=16% Similarity=0.169 Sum_probs=54.3
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
..||+||=+.+-.. + .+...|++.|..+.++..+. +.+++...++|
T Consensus 29 ~~~I~VLDfg~q~~-~--liar~lre~Gv~~~ivp~~~-------------------------------~~e~i~~~~~d 74 (697)
T 2vxo_A 29 EGAVVILDAGAQYG-K--VIDRRVRELFVQSEIFPLET-------------------------------PAFAIKEQGFR 74 (697)
T ss_dssp CCCEEEEEEC--CH-H--HHHHHHHHTTCCEEEEETTC-------------------------------CHHHHHHHTCS
T ss_pred CCEEEEEECCCchH-H--HHHHHHHHCCCEEEEEECCC-------------------------------CHHHHhhcCCC
Confidence 35788887654221 2 35588999998888876542 11222223689
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcC
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 133 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~a 133 (392)
+||++||.+...-...+.+ .++.++.++||.+||.|.++|+.+
T Consensus 75 GIILsGGp~s~~~~~~~~~---~~~i~~~g~PvLGIC~G~QlLa~~ 117 (697)
T 2vxo_A 75 AIIISGGPNSVYAEDAPWF---DPAIFTIGKPVLGICYGMQMMNKV 117 (697)
T ss_dssp EEEEEECC-------CCCC---CGGGTTSSCCEEEEEHHHHHHHHH
T ss_pred EEEECCCCCcccCccchhH---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 9999999753110111111 133456899999999999999974
No 142
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=93.40 E-value=0.029 Score=57.14 Aligned_cols=89 Identities=17% Similarity=0.235 Sum_probs=52.8
Q ss_pred CccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcC
Q 016237 201 DKRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYD 280 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D 280 (392)
..+++++-+.+-. -......+++.|..+.++..+. ..+++...++|
T Consensus 29 ~~~I~VLDfg~q~---~~liar~lre~Gv~~~ivp~~~-------------------------------~~e~i~~~~~d 74 (697)
T 2vxo_A 29 EGAVVILDAGAQY---GKVIDRRVRELFVQSEIFPLET-------------------------------PAFAIKEQGFR 74 (697)
T ss_dssp CCCEEEEEEC--C---HHHHHHHHHHTTCCEEEEETTC-------------------------------CHHHHHHHTCS
T ss_pred CCEEEEEECCCch---HHHHHHHHHHCCCEEEEEECCC-------------------------------CHHHHhhcCCC
Confidence 3467777655422 1235678888898888875531 11111113689
Q ss_pred EEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHc
Q 016237 281 ALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAA 326 (392)
Q Consensus 281 ~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~a 326 (392)
.||++||++..+-...+.+ .+...+.++||.+||.|.++|+.+
T Consensus 75 GIILsGGp~s~~~~~~~~~---~~~i~~~g~PvLGIC~G~QlLa~~ 117 (697)
T 2vxo_A 75 AIIISGGPNSVYAEDAPWF---DPAIFTIGKPVLGICYGMQMMNKV 117 (697)
T ss_dssp EEEEEECC-------CCCC---CGGGTTSSCCEEEEEHHHHHHHHH
T ss_pred EEEECCCCCcccCccchhH---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 9999999874221111111 123356899999999999999987
No 143
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=92.59 E-value=0.41 Score=42.42 Aligned_cols=83 Identities=13% Similarity=0.021 Sum_probs=54.6
Q ss_pred CCEEEEEecCCCC-ccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCc
Q 016237 8 KRSVLLLCGDYME-DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKY 86 (392)
Q Consensus 8 ~~kI~ill~~g~~-~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 86 (392)
|+||+|+- |.. ..+.....+.|++.||+|++++...-+ .+.++ ..+|
T Consensus 4 m~~vLiV~--g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~----------------------------~~~~~--L~~y 51 (259)
T 3rht_A 4 MTRVLYCG--DTSLETAAGYLAGLMTSWQWEFDYIPSHVGL----------------------------DVGEL--LAKQ 51 (259)
T ss_dssp --CEEEEE--SSCTTTTHHHHHHHHHHTTCCCEEECTTSCB----------------------------CSSHH--HHTC
T ss_pred CceEEEEC--CCCchhHHHHHHHHHHhCCceEEEecccccc----------------------------cChhH--HhcC
Confidence 67999993 332 345566777999999999999876321 01222 3489
Q ss_pred cEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 87 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 87 D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
|+||++.-. ... -++.-.+.|+++.++|.-++.+..
T Consensus 52 DvIIl~d~~-~~~--l~~~~~~~L~~yV~~GGgLi~~gG 87 (259)
T 3rht_A 52 DLVILSDYP-AER--MTAQAIDQLVTMVKAGCGLVMLGG 87 (259)
T ss_dssp SEEEEESCC-GGG--BCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEcCCc-ccc--CCHHHHHHHHHHHHhCCeEEEecC
Confidence 999998532 222 246777788888888887777653
No 144
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=83.07 E-value=4.1 Score=40.66 Aligned_cols=87 Identities=15% Similarity=0.092 Sum_probs=62.5
Q ss_pred CCEEEEEecCCC------Cc----------cchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCc
Q 016237 8 KRSVLLLCGDYM------ED----------YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHN 71 (392)
Q Consensus 8 ~~kI~ill~~g~------~~----------~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 71 (392)
+.|||||=.-|- .. ....++++.|+.++++|++++-+. +...
T Consensus 438 ~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIsfdD------------------I~e~---- 495 (759)
T 2zuv_A 438 ELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDD------------------VLAH---- 495 (759)
T ss_dssp CSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHHH------------------HHHH----
T ss_pred CceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEecHHH------------------hccc----
Confidence 479999975421 11 155779999999999999998652 1100
Q ss_pred cccCcCcCCCCCCCccEEEEcCCCC----cccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 72 FALNATFDEIDPSKYDGLVIPGGRA----PEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 72 ~~~~~~~~~~~~~~~D~iiipGG~~----~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
+ .+++||+||-+|-.+ ......++.....|+++..+|.-+++++.
T Consensus 496 -------e--~L~d~DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGe 544 (759)
T 2zuv_A 496 -------G--IDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp -------C--CCTTCCEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEES
T ss_pred -------c--ccccCCEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeCC
Confidence 1 135899999999322 11234579999999999999999999985
No 145
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=82.53 E-value=17 Score=32.36 Aligned_cols=91 Identities=16% Similarity=0.186 Sum_probs=53.0
Q ss_pred CCEEEEEecCCCCccch--HHHHHHHHhCC-CeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC
Q 016237 8 KRSVLLLCGDYMEDYEA--MVPFQALLAFG-VSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS 84 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~--~~~~~~l~~ag-~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (392)
+.||+|+.....-..+. ..+.+.|++.| |+|++......+ ... ..+.+ +..
T Consensus 4 ~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~~-----------------~d~--------~~f~~-~L~ 57 (281)
T 4e5v_A 4 PIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQG-----------------KDM--------SGFVL-DFS 57 (281)
T ss_dssp CEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCTT-----------------SCC--------TTCCC-CCT
T ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCccc-----------------cch--------hHHhh-hhh
Confidence 56888886533221221 34455556677 999997543110 000 01211 345
Q ss_pred CccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhH
Q 016237 85 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQL 128 (392)
Q Consensus 85 ~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~ 128 (392)
+||+||+-- .+ .. -++...+-|+++.++|+.++++.++..
T Consensus 58 ~~D~vV~~~-~~-~~--l~~~~~~~l~~yV~~Ggglv~~H~a~~ 97 (281)
T 4e5v_A 58 PYQLVVLDY-NG-DS--WPEETNRRFLEYVQNGGGVVIYHAADN 97 (281)
T ss_dssp TCSEEEECC-CS-SC--CCHHHHHHHHHHHHTTCEEEEEGGGGG
T ss_pred cCCEEEEeC-CC-Cc--CCHHHHHHHHHHHHcCCCEEEEecccc
Confidence 899999633 22 11 246777788888999999999987653
No 146
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=81.47 E-value=4.9 Score=35.41 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=53.0
Q ss_pred CCccEEEEeCCCCC-cchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 200 SDKRILFLCGDYME-DYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 200 ~~~~v~ill~~~~~-~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
.|++++++- +.. ......+.+.|+..||+|++++.+.-+ .+.+ ...+
T Consensus 3 ~m~~vLiV~--g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~----------------------------~~~~--~L~~ 50 (259)
T 3rht_A 3 AMTRVLYCG--DTSLETAAGYLAGLMTSWQWEFDYIPSHVGL----------------------------DVGE--LLAK 50 (259)
T ss_dssp ---CEEEEE--SSCTTTTHHHHHHHHHHTTCCCEEECTTSCB----------------------------CSSH--HHHT
T ss_pred CCceEEEEC--CCCchhHHHHHHHHHHhCCceEEEecccccc----------------------------cChh--HHhc
Confidence 467777773 332 234556777899999999999875221 0122 2348
Q ss_pred cCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEe
Q 016237 279 YDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASIC 317 (392)
Q Consensus 279 ~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC 317 (392)
||+||++.- ... .-++...+.|+++.++|.-++.+.
T Consensus 51 yDvIIl~d~-~~~--~l~~~~~~~L~~yV~~GGgLi~~g 86 (259)
T 3rht_A 51 QDLVILSDY-PAE--RMTAQAIDQLVTMVKAGCGLVMLG 86 (259)
T ss_dssp CSEEEEESC-CGG--GBCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEcCC-ccc--cCCHHHHHHHHHHHHhCCeEEEec
Confidence 999999742 211 235778888888888898777764
No 147
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=74.70 E-value=3.6 Score=34.14 Aligned_cols=104 Identities=15% Similarity=0.070 Sum_probs=51.2
Q ss_pred CCEEEEEecCCCCccc-h-HHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCC
Q 016237 8 KRSVLLLCGDYMEDYE-A-MVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSK 85 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e-~-~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 85 (392)
|+||+|+.+......+ + -.+.+.+.+.|.+++++...... .++..... .. ... ..+.....+ ..+
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~-~~~~~~~~------~~--~~~--~~~~~~~~~--l~~ 71 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAVS-TECEAVAP------DI--PAE--GALYATLED--LKN 71 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCCEE-C-----------------------CCBCCHHH--HHT
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhhcc-chhhhhcc------cc--ccc--cCchhhHHH--HHH
Confidence 5689998875422111 1 22345566689999998876421 11110000 00 000 111111222 337
Q ss_pred ccEEEEcCCCCcccccCCHHHHHHHHHHHh-------CCCeEEEEchh
Q 016237 86 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSN-------SGKTIASICHG 126 (392)
Q Consensus 86 ~D~iiipGG~~~~~~~~~~~l~~~l~~~~~-------~~~~i~aic~G 126 (392)
+|+||+..-.-. -.-.+.+.+||.+... ++|+++.++++
T Consensus 72 aD~ii~gsP~y~--~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~ 117 (200)
T 2a5l_A 72 CAGLALGSPTRF--GNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTST 117 (200)
T ss_dssp CSEEEEEEECBT--TBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEB
T ss_pred CCEEEEEcChhc--cCccHHHHHHHHHHHHHhhccccCCCEEEEEEec
Confidence 999999442111 1234667777777543 67877777664
No 148
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=68.19 E-value=64 Score=28.50 Aligned_cols=90 Identities=18% Similarity=0.215 Sum_probs=52.9
Q ss_pred CccEEEEeCCCCCcchh--HHHHHHHHhcC-CeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCC
Q 016237 201 DKRILFLCGDYMEDYEV--AVPFQSLQALE-CHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVS 277 (392)
Q Consensus 201 ~~~v~ill~~~~~~~e~--~~~~~~~~~~~-~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 277 (392)
..|++++........+- ..+.+.|++.| |+|++....... . . ...+.+ ...
T Consensus 4 ~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~~-----------------~--d------~~~f~~-~L~ 57 (281)
T 4e5v_A 4 PIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQG-----------------K--D------MSGFVL-DFS 57 (281)
T ss_dssp CEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCTT-----------------S--C------CTTCCC-CCT
T ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCccc-----------------c--c------hhHHhh-hhh
Confidence 34566665443332222 24555666667 999998643110 0 0 011222 356
Q ss_pred CcCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHH
Q 016237 278 GYDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQ 320 (392)
Q Consensus 278 ~~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~ 320 (392)
+||+||+-- .+. ...++..+-|+++.++|..++++.++.
T Consensus 58 ~~D~vV~~~-~~~---~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 58 PYQLVVLDY-NGD---SWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp TCSEEEECC-CSS---CCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred cCCEEEEeC-CCC---cCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 899999633 221 235778888888999999999998764
No 149
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=66.92 E-value=14 Score=33.30 Aligned_cols=109 Identities=12% Similarity=0.115 Sum_probs=50.5
Q ss_pred CCEEEEEecCCCCc--cchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCC
Q 016237 8 KRSVLLLCGDYMED--YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSK 85 (392)
Q Consensus 8 ~~kI~ill~~g~~~--~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 85 (392)
||||+|+.-+.-.. .-+....+.|++.|+++.+........... .... . .. ...|..... ....+.....
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~--~~~~-~---~~-~~~g~~~~~-~~~~~~~~~~ 75 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSL--HLAP-D---DM-RAMGVEIEV-VDADQHAADG 75 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-------------------------------------------
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhhhcc--cccc-c---cc-ccccccccc-cccccccccC
Confidence 46899988654321 235567778888999988765442100000 0000 0 00 000100100 0001112347
Q ss_pred ccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccC
Q 016237 86 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVK 137 (392)
Q Consensus 86 ~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~ 137 (392)
+|.|++.||.|+. +..++.+...+.|+.+|-.|. .|.|.
T Consensus 76 ~d~vi~~GGDGT~--------l~a~~~~~~~~~pvlgi~~G~-----~gfl~ 114 (307)
T 1u0t_A 76 CELVLVLGGDGTF--------LRAAELARNASIPVLGVNLGR-----IGFLA 114 (307)
T ss_dssp CCCEEEEECHHHH--------HHHHHHHHHHTCCEEEEECSS-----CCSSC
T ss_pred CCEEEEEeCCHHH--------HHHHHHhccCCCCEEEEeCCC-----CccCc
Confidence 8999999997643 333344444578998886653 46665
No 150
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=66.50 E-value=6 Score=33.56 Aligned_cols=60 Identities=22% Similarity=0.457 Sum_probs=45.2
Q ss_pred CEEEEEec-C---CCC---ccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCC
Q 016237 9 RSVLLLCG-D---YME---DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEI 81 (392)
Q Consensus 9 ~kI~ill~-~---g~~---~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (392)
+||+|+-. + ||. ..|.....+++++-|..|+++|...+ .+ ..+++++
T Consensus 1 mkiai~n~gnni~~fkt~p~setiyl~~~~~~mgl~vd~is~k~~----------------iy----------~~~fd~v 54 (351)
T 1jg7_A 1 MKIAIINMGNNVINFKTVPSSETIYLFKVISEMGLNVDIISLKNG----------------VY----------TKSFDEV 54 (351)
T ss_dssp CCEEEEESSSCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEESSCC----------------SS----------EEEGGGS
T ss_pred CceEEEecCCccccceecCccceeeHHHHHHHcCCCeeEEEeccc----------------ee----------eeecccC
Confidence 36888764 2 332 46888999999999999999998754 22 2357888
Q ss_pred CCCCccEEEEcCC
Q 016237 82 DPSKYDGLVIPGG 94 (392)
Q Consensus 82 ~~~~~D~iiipGG 94 (392)
++..||-++|...
T Consensus 55 d~n~ydr~~vvn~ 67 (351)
T 1jg7_A 55 DVNDYDRLIVVNS 67 (351)
T ss_dssp CGGGCSEEEEECC
T ss_pred CccccceEEEEec
Confidence 8889999888664
No 151
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=66.42 E-value=5.9 Score=31.61 Aligned_cols=107 Identities=14% Similarity=0.020 Sum_probs=59.3
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
..||.++-.+|+...=........ .+.+.-++.. .. ++.++. ....+.|+++..... .+.|
T Consensus 26 ~~kIvf~Gs~GvCtPFaeL~~Yai--R~~~~~FiP~-~d--------~e~a~~--l~~~~~G~~~~~~~~------~~~D 86 (157)
T 2r47_A 26 AERIGFAGVPGVCTPFAQLFAYAV--RDKDNIFIPN-TD--------FSKARK--LEVTEYGVELGEISP------GNVD 86 (157)
T ss_dssp CSEEEEEECTTTTHHHHHHHHHHT--TTSEEEEEET-TC--------GGGCEE--EEEETTEEEEEEECC------CCEE
T ss_pred CCeEEEECCCeeecCHHhhheeee--eCCceEEcCC-CC--------hhHceE--EEEecCceEeccccC------CCCC
Confidence 468999999998832111111222 2344444432 21 111111 122234555443322 2789
Q ss_pred EEEEcCCCCcccc-cCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCc
Q 016237 88 GLVIPGGRAPEYL-AMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD 134 (392)
Q Consensus 88 ~iiipGG~~~~~~-~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~ag 134 (392)
+|++-||.+.... ..-.++.++|.+..+.++-|.++|-= -++.++|
T Consensus 87 ~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFm-s~F~kag 133 (157)
T 2r47_A 87 VLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYM-DMFARAG 133 (157)
T ss_dssp EEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEET-THHHHTT
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhH-HHHHHcC
Confidence 9999999864332 23457888888887666679999963 3444554
No 152
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=66.05 E-value=5.8 Score=34.68 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=46.9
Q ss_pred chHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEEEcCCCCccccc-
Q 016237 23 EAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLVIPGGRAPEYLA- 101 (392)
Q Consensus 23 e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~iiipGG~~~~~~~- 101 (392)
+..-+.+.|+..+++|++++.+... . + +.. +.++ ..+||+||+..- +...+.
T Consensus 34 g~~~~~~aL~~~~~~V~~i~~~~~~------------------~--~--fP~--~~~~--L~~yDvIIl~d~-~~~~~l~ 86 (248)
T 3soz_A 34 GADYLLSCLRQGNIDVDYMPAHIVQ------------------T--R--FPQ--TAEA--LACYDAIVISDI-GSNTFLL 86 (248)
T ss_dssp CSHHHHHHHTTTTCEEEEEETTHHH------------------H--S--CCC--SHHH--HHTCSEEEEESC-CHHHHHS
T ss_pred hHHHHHHHHhcCCceeEEeCchhhh------------------h--h--CCC--ChHH--HhcCCEEEEcCC-Ccchhcc
Confidence 4455889999999999999875210 0 0 111 1122 348999999753 332221
Q ss_pred -----C----CHHHHHHHHHHHhCCCeEEEEc
Q 016237 102 -----M----NDSVIDLVRKFSNSGKTIASIC 124 (392)
Q Consensus 102 -----~----~~~l~~~l~~~~~~~~~i~aic 124 (392)
. .+.-.+.|+++.++|.-++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~V~~GGgLi~~g 118 (248)
T 3soz_A 87 QNRTFYNMDIIPDALQLIADYVAEGGGLLMIG 118 (248)
T ss_dssp CHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred CccccccccCCHHHHHHHHHHHHhCCEEEEEc
Confidence 1 2233788888888888777775
No 153
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=65.69 E-value=39 Score=33.85 Aligned_cols=94 Identities=12% Similarity=0.089 Sum_probs=63.4
Q ss_pred hcCCcCCC-CccEEEEeCCC------CCcc----------hhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCc
Q 016237 193 LGGTITGS-DKRILFLCGDY------MEDY----------EVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQ 255 (392)
Q Consensus 193 l~~~~~~~-~~~v~ill~~~------~~~~----------e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~ 255 (392)
..+. ... ..+|+||-..+ .... .+.+.++.|..++++|++++-+.
T Consensus 430 ~~~~-p~~~~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIsfdD----------------- 491 (759)
T 2zuv_A 430 TGGV-AAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDD----------------- 491 (759)
T ss_dssp HTTC-CCCCCSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHHH-----------------
T ss_pred cCCC-ccccCceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEecHHH-----------------
Confidence 3444 333 47888887442 1111 45779999999999999998651
Q ss_pred cccCCCCCcccccccccCCCCCCcCEEEEcCCCC----hhhccCChHHHHHHHHHHHcCCcEEEEeh
Q 016237 256 TYSEKPGHNFTLTANFESVDVSGYDALVVPGGRA----PEYLALNENVIALVKDFMEAKKPVASICH 318 (392)
Q Consensus 256 ~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~----~~~~~~~~~l~~~l~~~~~~g~~i~aiC~ 318 (392)
+ ... + .+++||+||-+|-.+ ......++..++.||++..+|.-+++++.
T Consensus 492 -I--------~e~----e-~L~d~DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGe 544 (759)
T 2zuv_A 492 -V--------LAH----G-IDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp -H--------HHH----C-CCTTCCEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEES
T ss_pred -h--------ccc----c-ccccCCEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeCC
Confidence 1 101 2 246899999988332 11234569999999999999998888764
No 154
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=63.57 E-value=9.4 Score=31.39 Aligned_cols=84 Identities=12% Similarity=0.073 Sum_probs=49.6
Q ss_pred CCEEEEEecCCCCccc-h-HHHHHHHHh-CCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC
Q 016237 8 KRSVLLLCGDYMEDYE-A-MVPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS 84 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e-~-~~~~~~l~~-ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (392)
|+||+|+-+......+ + -.+.+.+.+ .|.+++++..... ...+ ..
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~------------------------------~~~~--l~ 51 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEA------------------------------TKED--VL 51 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTC------------------------------CHHH--HH
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC------------------------------CHHH--HH
Confidence 5689998875432221 1 223445556 7888888766421 0222 23
Q ss_pred CccEEEEcCCCCcccccCCHHHHHHHHHHHh------CCCeEEEEch
Q 016237 85 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSN------SGKTIASICH 125 (392)
Q Consensus 85 ~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~------~~~~i~aic~ 125 (392)
++|+|++..-.- .-.-.+.+.+||.+... ++|+++.+++
T Consensus 52 ~aD~ii~gsP~y--~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t 96 (188)
T 2ark_A 52 WADGLAVGSPTN--MGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSS 96 (188)
T ss_dssp HCSEEEEEEECB--TTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEE
T ss_pred hCCEEEEEeCcc--CCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEE
Confidence 689999944211 11234678888888765 6788777766
No 155
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=62.59 E-value=21 Score=36.08 Aligned_cols=61 Identities=20% Similarity=0.271 Sum_probs=47.1
Q ss_pred chHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEEEcCCCCcccccC
Q 016237 23 EAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLVIPGGRAPEYLAM 102 (392)
Q Consensus 23 e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~iiipGG~~~~~~~~ 102 (392)
++...+..|.+.|+.+++++++. + .+.|++||+|.-. .-
T Consensus 426 ~~~~~y~aL~~~gi~vD~v~~~~----------------------------------d--L~~Yklvv~P~~~-----~~ 464 (675)
T 3tty_A 426 EVHKYYDALYKQNIQTDMISVEE----------------------------------D--LSKYKVVIAPVMY-----MV 464 (675)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTS----------------------------------C--CTTCSEEEETTCC-----BC
T ss_pred HHHHHHHHHHHcCceEEEecCcC----------------------------------C--cccCCEEEEeccE-----ec
Confidence 56789999999999999998652 1 2379999999853 23
Q ss_pred CHHHHHHHHHHHhCCCeEEEEc
Q 016237 103 NDSVIDLVRKFSNSGKTIASIC 124 (392)
Q Consensus 103 ~~~l~~~l~~~~~~~~~i~aic 124 (392)
++.+.+.|+++.++|..+..-+
T Consensus 465 ~~~~~~~L~~yV~~GG~lv~t~ 486 (675)
T 3tty_A 465 KPGFAERVERFVAQGGTFVTTF 486 (675)
T ss_dssp CTTHHHHHHHHHHTTCEEEEET
T ss_pred CHHHHHHHHHHHhcCCEEEEEc
Confidence 5678888999988887766554
No 156
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=58.31 E-value=22 Score=27.59 Aligned_cols=84 Identities=18% Similarity=0.277 Sum_probs=47.9
Q ss_pred CEEEEEecCCCCcc-chHH-HHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC-C
Q 016237 9 RSVLLLCGDYMEDY-EAMV-PFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS-K 85 (392)
Q Consensus 9 ~kI~ill~~g~~~~-e~~~-~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~ 85 (392)
+||+|+-+...-.. .++. +.+.|.+.|++++++..... ...+ .. +
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~------------------------------~~~~--l~~~ 49 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA------------------------------SAEN--LADG 49 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB------------------------------CCTT--TTTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC------------------------------CHhH--hccc
Confidence 58888876544322 2222 34556677889988876531 0111 23 6
Q ss_pred ccEEEEcCCC-Cc--ccccCCHHHHHHHHHHHh---CCCeEEEEchh
Q 016237 86 YDGLVIPGGR-AP--EYLAMNDSVIDLVRKFSN---SGKTIASICHG 126 (392)
Q Consensus 86 ~D~iiipGG~-~~--~~~~~~~~l~~~l~~~~~---~~~~i~aic~G 126 (392)
||.|++.... +. -. -.+.+.+|+.+... +++.++.++.|
T Consensus 50 ~d~ii~g~pty~~~~G~--~p~~~~~fl~~l~~~~l~~k~~~vfg~G 94 (148)
T 3f6r_A 50 YDAVLFGCSAWGMEDLE--MQDDFLSLFEEFDRIGLAGRKVAAFASG 94 (148)
T ss_dssp CSEEEEEECEECSSSCE--ECHHHHHHHTTGGGTCCTTCEEEEEEEE
T ss_pred CCEEEEEecccCCCCCC--CcHHHHHHHHHhhccCCCCCEEEEEEeC
Confidence 8988884421 21 01 13567777776543 57888777765
No 157
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=56.62 E-value=7.7 Score=34.62 Aligned_cols=109 Identities=12% Similarity=0.053 Sum_probs=57.8
Q ss_pred CCEEEEEecCCCC--ccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCC
Q 016237 8 KRSVLLLCGDYME--DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSK 85 (392)
Q Consensus 8 ~~kI~ill~~g~~--~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 85 (392)
||||+|+.-+.-. ...+....+.|++.|+++.+...... .. ...+... ...+. ....
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~----------------~~-~~~~~~~---~~~~~-~~~~ 63 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAH----------------EL-QLKNVPT---GTLAE-IGQQ 63 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHH----------------HT-TCSSCCE---ECHHH-HHHH
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh----------------hc-ccccccc---cchhh-cccC
Confidence 5689999875422 12355677888899998876532110 00 0000000 00111 1236
Q ss_pred ccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHH
Q 016237 86 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA 153 (392)
Q Consensus 86 ~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~ 153 (392)
+|.||+.||.|+ +.+.++.+...+.|+.+|-.| ..|.|.. . ...+..+.++.
T Consensus 64 ~D~vi~~GGDGT--------~l~a~~~~~~~~~P~lGI~~G-----t~gfla~--~-~~~~~~~al~~ 115 (292)
T 2an1_A 64 ADLAVVVGGDGN--------MLGAARTLARYDINVIGINRG-----NLGFLTD--L-DPDNALQQLSD 115 (292)
T ss_dssp CSEEEECSCHHH--------HHHHHHHHTTSSCEEEEBCSS-----SCCSSCC--B-CTTSHHHHHHH
T ss_pred CCEEEEEcCcHH--------HHHHHHHhhcCCCCEEEEECC-----CcccCCc--C-CHHHHHHHHHH
Confidence 899999999764 334445555667899998644 4566643 2 22334445554
No 158
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=56.35 E-value=8 Score=32.42 Aligned_cols=40 Identities=25% Similarity=0.430 Sum_probs=24.4
Q ss_pred CCccEEEEcCCCCccc-ccCCHHHHHHHHHHHh------CCCeEEEEchh
Q 016237 84 SKYDGLVIPGGRAPEY-LAMNDSVIDLVRKFSN------SGKTIASICHG 126 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~-~~~~~~l~~~l~~~~~------~~~~i~aic~G 126 (392)
.++|+||+.- |.+ ..-...+.+||..... ++|+++.++++
T Consensus 72 ~~AD~iVi~t---P~Y~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~ts 118 (199)
T 4hs4_A 72 ATADAVVIVT---PEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTAS 118 (199)
T ss_dssp HHSSEEEEEE---CCBTTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEEC
T ss_pred HhCCEEEEEc---CccCCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeC
Confidence 4789999943 222 2234556667766654 57777777653
No 159
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=55.02 E-value=21 Score=31.67 Aligned_cols=79 Identities=16% Similarity=0.168 Sum_probs=51.2
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
.+||+|+.-+.-. .....+.|++.|+++.+...... . ....|
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~~~~~~---------------------------------~--~~~~D 70 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVELFNQPSE---------------------------------E--LENFD 70 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEEESSCCG---------------------------------G--GGGSS
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEEcccccc---------------------------------c--cCCCC
Confidence 3578888765544 66778889999998876442210 0 12579
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCC
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKG 138 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g 138 (392)
+||+-||.|.. +.-.+.+... .||.+|-.| ..|.|..
T Consensus 71 lvIvlGGDGT~--------L~aa~~~~~~-~PilGIN~G-----~lGFLt~ 107 (278)
T 1z0s_A 71 FIVSVGGDGTI--------LRILQKLKRC-PPIFGINTG-----RVGLLTH 107 (278)
T ss_dssp EEEEEECHHHH--------HHHHTTCSSC-CCEEEEECS-----SSCTTCC
T ss_pred EEEEECCCHHH--------HHHHHHhCCC-CcEEEECCC-----CCccccc
Confidence 99999997643 2223333344 899999987 4466643
No 160
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=54.28 E-value=11 Score=33.01 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=47.6
Q ss_pred chHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEEEcCCCCccccc-
Q 016237 23 EAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLVIPGGRAPEYLA- 101 (392)
Q Consensus 23 e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~iiipGG~~~~~~~- 101 (392)
+.....+.|+.++++|+++.+...+ . .+ +...++ ..+||+||+.+.... .+.
T Consensus 41 ~~~~l~~aL~~~~~~v~~~~~~~~~------------------~----~f--p~~~~~--L~~yDvIIl~~~~~~-~l~~ 93 (256)
T 2gk3_A 41 GATWLLECLRKGGVDIDYMPAHTVQ------------------I----AF--PESIDE--LNRYDVIVISDIGSN-TFLL 93 (256)
T ss_dssp SCHHHHHHHHHTTCEEEEECHHHHH------------------H----CC--CCSHHH--HHTCSEEEEESCCHH-HHHS
T ss_pred cHHHHHHHHHhcCceEEEEecccch------------------h----hC--CcChhH--HhcCCEEEEeCCchh-hccc
Confidence 5567888999999999998643110 0 00 001222 348999999874321 111
Q ss_pred -----CC----HHHHHHHHHHHhCCCeEEEEc
Q 016237 102 -----MN----DSVIDLVRKFSNSGKTIASIC 124 (392)
Q Consensus 102 -----~~----~~l~~~l~~~~~~~~~i~aic 124 (392)
.+ +...+.|+++.++|.-+..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~V~~GGgll~ig 125 (256)
T 2gk3_A 94 QNETFYQLKIKPNALESIKEYVKNGGGLLMIG 125 (256)
T ss_dssp CHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred ccccccccccChHHHHHHHHHHHhCCEEEEEC
Confidence 11 556788899999999888884
No 161
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=52.91 E-value=20 Score=32.62 Aligned_cols=93 Identities=15% Similarity=0.108 Sum_probs=54.1
Q ss_pred CCEEEEEecCCCC---c-cchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCC
Q 016237 8 KRSVLLLCGDYME---D-YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP 83 (392)
Q Consensus 8 ~~kI~ill~~g~~---~-~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (392)
|+|++|++-+..- . ..+......|+++|+++.+....... .. ..+ ..+...
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~---------------~a-----~~~-----~~~~~~ 78 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIG---------------DA-----TLE-----AERAMH 78 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTT---------------HH-----HHH-----HHHHTT
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcc---------------hH-----HHH-----HHHHhh
Confidence 4588888866432 1 12446778888899988877543210 00 001 011112
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHH--HhCCCeEEEEchhhH-HhhcC
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKF--SNSGKTIASICHGQL-ILAAA 133 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~--~~~~~~i~aic~G~~-~La~a 133 (392)
..+|.|++.||.|+- .+.++.. ...+.+++.|=.|.. .||+.
T Consensus 79 ~~~d~vvv~GGDGTv--------~~v~~~l~~~~~~~pl~iIP~GT~N~lAr~ 123 (337)
T 2qv7_A 79 ENYDVLIAAGGDGTL--------NEVVNGIAEKPNRPKLGVIPMGTVNDFGRA 123 (337)
T ss_dssp TTCSEEEEEECHHHH--------HHHHHHHTTCSSCCEEEEEECSSCCHHHHH
T ss_pred cCCCEEEEEcCchHH--------HHHHHHHHhCCCCCcEEEecCCcHhHHHHH
Confidence 368999999997643 2233333 345778888888874 45543
No 162
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=51.46 E-value=4.2 Score=32.46 Aligned_cols=50 Identities=30% Similarity=0.363 Sum_probs=36.7
Q ss_pred CCcCEEEEcCCCChhh-ccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcC
Q 016237 277 SGYDALVVPGGRAPEY-LALNENVIALVKDFMEAKKPVASICHGQQILAAAG 327 (392)
Q Consensus 277 ~~~D~viipgg~~~~~-~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~ag 327 (392)
.+.|+|++-||..... -..-+.+.+.|.+..+.++.|.++|-=. ++.++|
T Consensus 83 ~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms-~F~kag 133 (157)
T 2r47_A 83 GNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMD-MFARAG 133 (157)
T ss_dssp CCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETT-HHHHTT
T ss_pred CCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHH-HHHHcC
Confidence 3789999999987433 3455778888888876777799999653 355555
No 163
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=50.41 E-value=35 Score=29.61 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=44.8
Q ss_pred HHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEEEcCCCCcccccCCHHH
Q 016237 27 PFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLVIPGGRAPEYLAMNDSV 106 (392)
Q Consensus 27 ~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~iiipGG~~~~~~~~~~~l 106 (392)
+.+.|++.||+|++.+.+.. ...+.....++||+||.-|-..... -+++.
T Consensus 37 i~~~L~~~gf~V~~~t~dd~----------------------------~~~~~~~~L~~~DvvV~~~~~~~~~--l~~~~ 86 (252)
T 1t0b_A 37 IASYLAEAGFDAATAVLDEP----------------------------EHGLTDEVLDRCDVLVWWGHIAHDE--VKDEV 86 (252)
T ss_dssp HHHHHHHTTCEEEEEESSSG----------------------------GGGCCHHHHHTCSEEEEECSSCGGG--SCHHH
T ss_pred HHHHHhhCCcEEEEEeccCc----------------------------cccCCHhHHhcCCEEEEecCCCCCc--CCHHH
Confidence 37888889999999774321 0011111234899999843211111 35667
Q ss_pred HHHHHHHHhCCCeEEEEchh
Q 016237 107 IDLVRKFSNSGKTIASICHG 126 (392)
Q Consensus 107 ~~~l~~~~~~~~~i~aic~G 126 (392)
.+-|+++.++|+-++++-.|
T Consensus 87 ~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 87 VERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp HHHHHHHHHTTCEEEEEGGG
T ss_pred HHHHHHHHHcCCCEEEEccc
Confidence 77888889999999998655
No 164
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=49.80 E-value=19 Score=29.53 Aligned_cols=102 Identities=18% Similarity=0.102 Sum_probs=50.7
Q ss_pred CEEEEEecCCCCccc--hHHHHHHHHh-CCCeEEEECCCCCCCCCCCccccCCCCcccccccccCc--cccCcCcCCCCC
Q 016237 9 RSVLLLCGDYMEDYE--AMVPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHN--FALNATFDEIDP 83 (392)
Q Consensus 9 ~kI~ill~~g~~~~e--~~~~~~~l~~-ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~ 83 (392)
+||+|+-+......+ .-.+.+.+.+ +|.+++++...... ..+ +.+..+.. ..+.....+ .
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~~-~~~------------~~~~~~~~~~~~~~~~~~~--l 66 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETM-PPQ------------LFEKAGGKTQTAPVATPQE--L 66 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCCS-CHH------------HHHHTTCCCCCSCBCCGGG--G
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccccC-chh------------hhhhcccccccCchhhHHH--H
Confidence 589888875322111 1233455566 79999998876421 000 00001110 011111233 3
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHH-------hCCCeEEEEchhh
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFS-------NSGKTIASICHGQ 127 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~-------~~~~~i~aic~G~ 127 (392)
.++|+||+..-. -.-.-...+..||.+.. -++|+++.++++.
T Consensus 67 ~~aD~ii~gsP~--y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g 115 (198)
T 3b6i_A 67 ADYDAIIFGTPT--RFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTG 115 (198)
T ss_dssp GGCSEEEEEEEE--ETTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEES
T ss_pred HHCCEEEEEeCh--hcCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCC
Confidence 479999994321 11122456667776653 2578877777654
No 165
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=49.48 E-value=34 Score=29.69 Aligned_cols=71 Identities=13% Similarity=0.088 Sum_probs=46.1
Q ss_pred HHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCChhhccCChHH
Q 016237 220 PFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAPEYLALNENV 299 (392)
Q Consensus 220 ~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~~~~~~~~~l 299 (392)
+.+.|+..+|+|++.+.+.. ...+.+..+.+||+||+-|-.... ..+++.
T Consensus 37 i~~~L~~~gf~V~~~t~dd~----------------------------~~~~~~~~L~~~DvvV~~~~~~~~--~l~~~~ 86 (252)
T 1t0b_A 37 IASYLAEAGFDAATAVLDEP----------------------------EHGLTDEVLDRCDVLVWWGHIAHD--EVKDEV 86 (252)
T ss_dssp HHHHHHHTTCEEEEEESSSG----------------------------GGGCCHHHHHTCSEEEEECSSCGG--GSCHHH
T ss_pred HHHHHhhCCcEEEEEeccCc----------------------------cccCCHhHHhcCCEEEEecCCCCC--cCCHHH
Confidence 47788888999999874310 001111123479999984311111 246777
Q ss_pred HHHHHHHHHcCCcEEEEehHH
Q 016237 300 IALVKDFMEAKKPVASICHGQ 320 (392)
Q Consensus 300 ~~~l~~~~~~g~~i~aiC~G~ 320 (392)
.+-|+++.++|+-++++-.|.
T Consensus 87 ~~al~~~V~~GgG~vgiH~a~ 107 (252)
T 1t0b_A 87 VERVHRRVLEGMGLIVLHSGH 107 (252)
T ss_dssp HHHHHHHHHTTCEEEEEGGGG
T ss_pred HHHHHHHHHcCCCEEEEcccC
Confidence 888999999999999996664
No 166
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=48.92 E-value=37 Score=31.56 Aligned_cols=90 Identities=8% Similarity=-0.006 Sum_probs=49.3
Q ss_pred CCEEEEEecCCCCccc-h-HHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCC
Q 016237 8 KRSVLLLCGDYMEDYE-A-MVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSK 85 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e-~-~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 85 (392)
++||+|+-+.....++ + -...+.+.+.|++++++.....+ ......+ ..+
T Consensus 256 ~~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~~--------------------------~~~~~~~--l~~ 307 (414)
T 2q9u_A 256 QKKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSSD--------------------------ITKVALH--TYD 307 (414)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGCC--------------------------HHHHHHH--HHT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcCC--------------------------HHHHHHH--HHh
Confidence 4688887765433222 1 12344555677777776543210 0000112 237
Q ss_pred ccEEEEcCCCCcccccCCHHHHHHHHHHHh----CCCeEEEEchhh
Q 016237 86 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSN----SGKTIASICHGQ 127 (392)
Q Consensus 86 ~D~iiipGG~~~~~~~~~~~l~~~l~~~~~----~~~~i~aic~G~ 127 (392)
||+|++..-.-. -...+.+.+|+.+... ++|+++.+|++.
T Consensus 308 ~D~iiigsP~y~--~~~~~~~k~fld~l~~~~~~~~K~~~~~~t~g 351 (414)
T 2q9u_A 308 SGAVAFASPTLN--NTMMPSVAAALNYVRGLTLIKGKPAFAFGAFG 351 (414)
T ss_dssp CSEEEEECCCBT--TBCCHHHHHHHHHHHHHTTTTTSBEEEEEEES
T ss_pred CCEEEEEcCccC--cCchHHHHHHHHHHHhhcccCCCEEEEEEecC
Confidence 999999553211 1234567777777653 789988888764
No 167
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=48.73 E-value=16 Score=30.42 Aligned_cols=38 Identities=13% Similarity=-0.108 Sum_probs=23.5
Q ss_pred CCEEEEEecCCCCcc--chHHHHHHHHhCCCeEEEECCCC
Q 016237 8 KRSVLLLCGDYMEDY--EAMVPFQALLAFGVSVDAACPGK 45 (392)
Q Consensus 8 ~~kI~ill~~g~~~~--e~~~~~~~l~~ag~~v~~~s~~~ 45 (392)
++||+|+.+...... =.-.+.+.+.+.|.+++++....
T Consensus 6 mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 6 PVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 569999987542211 11223455566789999987754
No 168
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=47.31 E-value=18 Score=31.48 Aligned_cols=88 Identities=11% Similarity=0.132 Sum_probs=52.7
Q ss_pred CCCEEEEEecCCCCc---cchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCC
Q 016237 7 GKRSVLLLCGDYMED---YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP 83 (392)
Q Consensus 7 ~~~kI~ill~~g~~~---~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (392)
++++|++++.+-.+. .-+.+..+.+++.|+++.+......+ -.. ...++.+..
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~----------------~~~--------~~~~~~l~~ 59 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRND----------------QTQ--------VSQIQTLIA 59 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCH----------------HHH--------HHHHHHHHH
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCCH----------------HHH--------HHHHHHHHH
Confidence 458999999753332 23456777788899999888654321 000 001111112
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
..+|+||+.+.. .......++++.+.+.|+..+..
T Consensus 60 ~~vdgiIi~~~~-------~~~~~~~~~~~~~~~iPvV~~~~ 94 (291)
T 3l49_A 60 QKPDAIIEQLGN-------LDVLNPWLQKINDAGIPLFTVDT 94 (291)
T ss_dssp HCCSEEEEESSC-------HHHHHHHHHHHHHTTCCEEEESC
T ss_pred cCCCEEEEeCCC-------hhhhHHHHHHHHHCCCcEEEecC
Confidence 368999986542 12344567777788999887753
No 169
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=46.87 E-value=53 Score=33.10 Aligned_cols=61 Identities=18% Similarity=0.274 Sum_probs=46.5
Q ss_pred hhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCEEEEcCCCChhhccC
Q 016237 216 EVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDALVVPGGRAPEYLAL 295 (392)
Q Consensus 216 e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~viipgg~~~~~~~~ 295 (392)
.+...+..|.+.|+.+++++++ + +.++|++||+|.-. .-
T Consensus 426 ~~~~~y~aL~~~gi~vD~v~~~----------------------------------~--dL~~Yklvv~P~~~-----~~ 464 (675)
T 3tty_A 426 EVHKYYDALYKQNIQTDMISVE----------------------------------E--DLSKYKVVIAPVMY-----MV 464 (675)
T ss_dssp HHHHHHHHHHTTTCCEEEECTT----------------------------------S--CCTTCSEEEETTCC-----BC
T ss_pred HHHHHHHHHHHcCceEEEecCc----------------------------------C--CcccCCEEEEeccE-----ec
Confidence 4567888899999999999763 0 23479999999842 34
Q ss_pred ChHHHHHHHHHHHcCCcEEEEe
Q 016237 296 NENVIALVKDFMEAKKPVASIC 317 (392)
Q Consensus 296 ~~~l~~~l~~~~~~g~~i~aiC 317 (392)
++.+.+.|+++.++|..+.+-+
T Consensus 465 ~~~~~~~L~~yV~~GG~lv~t~ 486 (675)
T 3tty_A 465 KPGFAERVERFVAQGGTFVTTF 486 (675)
T ss_dssp CTTHHHHHHHHHHTTCEEEEET
T ss_pred CHHHHHHHHHHHhcCCEEEEEc
Confidence 6889999999999988665543
No 170
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=46.03 E-value=61 Score=30.01 Aligned_cols=63 Identities=13% Similarity=0.019 Sum_probs=36.7
Q ss_pred CcCEEEEcCCCChhhccCChHHHHHHHHHHH----cCCcEEEEehHHHHHHHcCCCCCceeecCchhHHHHHH-cCCeee
Q 016237 278 GYDALVVPGGRAPEYLALNENVIALVKDFME----AKKPVASICHGQQILAAAGVLKGKKCTAYPAVKLNVLL-AGASWL 352 (392)
Q Consensus 278 ~~D~viipgg~~~~~~~~~~~l~~~l~~~~~----~g~~i~aiC~G~~~La~aglL~g~~~T~~~~~~~~~~~-~~~~~~ 352 (392)
++|.|++....- .....+.+..|+.+... ++|+++.+|++.. - | .+.......++. .|.+++
T Consensus 307 ~~D~iiigsP~y--~~~~~~~~k~fld~l~~~~~~~~K~~~~~~t~g~------~--~---~a~~~l~~~l~~~~g~~~~ 373 (414)
T 2q9u_A 307 DSGAVAFASPTL--NNTMMPSVAAALNYVRGLTLIKGKPAFAFGAFGW------S--N---RAVPDIVAELRDGCKADVY 373 (414)
T ss_dssp TCSEEEEECCCB--TTBCCHHHHHHHHHHHHHTTTTTSBEEEEEEESS------S--C---CHHHHHHHHHHHTSCCBCC
T ss_pred hCCEEEEEcCcc--CcCchHHHHHHHHHHHhhcccCCCEEEEEEecCC------C--c---hhHHHHHHHHHhhcCcEEc
Confidence 689999965211 11234457777776553 7899998887631 0 1 122334455556 677665
Q ss_pred C
Q 016237 353 E 353 (392)
Q Consensus 353 ~ 353 (392)
.
T Consensus 374 ~ 374 (414)
T 2q9u_A 374 D 374 (414)
T ss_dssp C
T ss_pred c
Confidence 4
No 171
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=44.85 E-value=1.7e+02 Score=26.12 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=62.4
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
++|+|++.+|-+.-+-......|...|++|.++-+.... . ..+...........|..+... ..++....+|+
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~--~----~~~a~~~~~~~~~~g~~~~~~--~~~l~~~~~dl 204 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVK--M----LESITNELSLFSKTQGQQVSS--LKDLPTSPVDL 204 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSS--C----CHHHHHHHHHHHTSSCEEESC--STTSCSSCCSE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCCC--C----CHHHHHHHHHHHHcCCccccc--hhhhccCCCCE
Confidence 589999999999999999999999999999998765211 0 000000000001112222211 11111124555
Q ss_pred EEEcCCCCcc-cccCCHHHHHHHHHHHhCCCeEEEEchhh
Q 016237 89 LVIPGGRAPE-YLAMNDSVIDLVRKFSNSGKTIASICHGQ 127 (392)
Q Consensus 89 iiipGG~~~~-~~~~~~~l~~~l~~~~~~~~~i~aic~G~ 127 (392)
||=.=|.|.. .+.....+.++|+...+.+.+|.||--=+
T Consensus 205 IIDALG~G~~~~l~~~~~~~~lI~~iN~~~~~VvAVDiPS 244 (306)
T 3d3j_A 205 VINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPV 244 (306)
T ss_dssp EEEECCCTTCGGGGGCHHHHHHHHHHHHSCCCEEEESCCC
T ss_pred EEECCCCCCCCccCcchHHHHHHHHHHhcCCCEEEEECCC
Confidence 4421133322 23323677778887777889999987633
No 172
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=41.98 E-value=20 Score=28.61 Aligned_cols=86 Identities=13% Similarity=-0.003 Sum_probs=45.2
Q ss_pred EEEEEecCCCCcc-chH-HHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 10 SVLLLCGDYMEDY-EAM-VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 10 kI~ill~~g~~~~-e~~-~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
||+|+-+...-.+ .++ .+.+.|...|.+++++...... .+.-..+ ..+||
T Consensus 2 kv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~--------------------------~~~~~~~--~~~~d 53 (161)
T 3hly_A 2 SVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAVD--------------------------PQELIEA--VSSAR 53 (161)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTTCC--------------------------HHHHHHH--HHHCS
T ss_pred EEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCCC--------------------------HHHHHHH--HHhCC
Confidence 5777766544322 222 3456677788888887654210 0000111 23699
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHH---hCCCeEEEEchhh
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFS---NSGKTIASICHGQ 127 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~---~~~~~i~aic~G~ 127 (392)
.|++....-...+ +. ..++.+.. -++++++.++++.
T Consensus 54 ~ii~Gspty~g~~---p~-~~fl~~l~~~~l~gk~v~~fgs~g 92 (161)
T 3hly_A 54 GIVLGTPPSQPSE---AV-ATALSTIFAAAHNKQAIGLFDSYG 92 (161)
T ss_dssp EEEEECCBSSCCH---HH-HHHHHHHHHHCCTTSEEEEECCCC
T ss_pred EEEEEcCCcCCch---hH-HHHHHHHHhhhhCCCEEEEEEcCC
Confidence 9998543211111 22 44555443 3789999888643
No 173
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=41.19 E-value=54 Score=29.28 Aligned_cols=103 Identities=12% Similarity=0.145 Sum_probs=47.3
Q ss_pred CccEEEEeCCCCCc--chhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCC
Q 016237 201 DKRILFLCGDYMED--YEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSG 278 (392)
Q Consensus 201 ~~~v~ill~~~~~~--~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 278 (392)
|+++.++..+.... .......+.|++.|+++.+............. .. ...+ ..+..+..- .-.+....+
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----~~-~~~~-~~g~~~~~~-~~~~~~~~~ 75 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHL-----AP-DDMR-AMGVEIEVV-DADQHAADG 75 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-------------------------------------------
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhhhcccc-----cc-cccc-ccccccccc-ccccccccC
Confidence 56787777654321 12445677788889988776543211000000 00 0000 001001100 001112347
Q ss_pred cCEEEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehH
Q 016237 279 YDALVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHG 319 (392)
Q Consensus 279 ~D~viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G 319 (392)
+|+||+-||.| .++..++.+...+.|+.+|-.|
T Consensus 76 ~d~vi~~GGDG--------T~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 76 CELVLVLGGDG--------TFLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp CCCEEEEECHH--------HHHHHHHHHHHHTCCEEEEECS
T ss_pred CCEEEEEeCCH--------HHHHHHHHhccCCCCEEEEeCC
Confidence 89999999866 4555556666667899999766
No 174
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=41.16 E-value=34 Score=30.52 Aligned_cols=91 Identities=16% Similarity=0.153 Sum_probs=53.0
Q ss_pred CCEEEEEecCCCCc----cchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCC
Q 016237 8 KRSVLLLCGDYMED----YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP 83 (392)
Q Consensus 8 ~~kI~ill~~g~~~----~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (392)
+||++|++-|..-. .-+......|+++|+++++....... ....+. .++.
T Consensus 8 m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~--------------------~a~~~~-----~~~~- 61 (304)
T 3s40_A 8 FEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQG--------------------DATKYC-----QEFA- 61 (304)
T ss_dssp CSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTT--------------------HHHHHH-----HHHT-
T ss_pred CCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcc--------------------hHHHHH-----HHhh-
Confidence 67999998763221 12345667788899988887543210 000111 1111
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHHh--CCCeEEEEchhhH-Hhhc
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSN--SGKTIASICHGQL-ILAA 132 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~--~~~~i~aic~G~~-~La~ 132 (392)
..||.|++.||.|+- .+.+..... ...+++.|=.|+. .+|.
T Consensus 62 ~~~d~vv~~GGDGTl--------~~v~~~l~~~~~~~~l~iiP~Gt~N~~ar 105 (304)
T 3s40_A 62 SKVDLIIVFGGDGTV--------FECTNGLAPLEIRPTLAIIPGGTCNDFSR 105 (304)
T ss_dssp TTCSEEEEEECHHHH--------HHHHHHHTTCSSCCEEEEEECSSCCHHHH
T ss_pred cCCCEEEEEccchHH--------HHHHHHHhhCCCCCcEEEecCCcHHHHHH
Confidence 268999999997643 233444444 5678888877774 4543
No 175
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=40.42 E-value=21 Score=31.58 Aligned_cols=87 Identities=10% Similarity=0.075 Sum_probs=52.8
Q ss_pred CCEEEEEecC---CCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC
Q 016237 8 KRSVLLLCGD---YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS 84 (392)
Q Consensus 8 ~~kI~ill~~---g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (392)
.++|++++.+ .|...-+.+..+.+++.|+++.+......+ -... ..++.+-..
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~----------------~~~~--------~~i~~l~~~ 57 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNE----------------ETQM--------SQIENMINR 57 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTCH----------------HHHH--------HHHHHHHHT
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCH----------------HHHH--------HHHHHHHHc
Confidence 4689999974 455555667778888899999988664321 0000 011111123
Q ss_pred CccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 85 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 85 ~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
.+|+||+.+... ..+...++++.+.+.|+..+..
T Consensus 58 ~vdgiIi~~~~~-------~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 58 GVDVLVIIPYNG-------QVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp TCSEEEEECSST-------TSCHHHHHHHHTTTCEEEEESS
T ss_pred CCCEEEEeCCCh-------hhhHHHHHHHHHCCCeEEEECC
Confidence 689999976421 1223456677778999887753
No 176
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=39.15 E-value=32 Score=28.13 Aligned_cols=37 Identities=16% Similarity=0.011 Sum_probs=21.8
Q ss_pred CCEEEEEecCCCCccc--hHHHHHHHHhCCCeEEEECCCC
Q 016237 8 KRSVLLLCGDYMEDYE--AMVPFQALLAFGVSVDAACPGK 45 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e--~~~~~~~l~~ag~~v~~~s~~~ 45 (392)
|+||+|+.+. ....+ .-.+.+.+.+.|.+++++....
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 3589988877 22111 1122344455789999887654
No 177
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=38.89 E-value=34 Score=26.09 Aligned_cols=67 Identities=18% Similarity=0.145 Sum_probs=36.2
Q ss_pred CCccEEEEcCCC-CcccccCCHHHHHHHHHHHh--CCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEEc
Q 016237 84 SKYDGLVIPGGR-APEYLAMNDSVIDLVRKFSN--SGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIE 160 (392)
Q Consensus 84 ~~~D~iiipGG~-~~~~~~~~~~l~~~l~~~~~--~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~~ 160 (392)
.+||.|++.... +.... .+..+.+|+.+... ++++++.++++.+- .| .+.....+.|++.|...+.
T Consensus 44 ~~~d~iiig~pty~~g~~-p~~~~~~fl~~l~~~l~~k~~~~f~t~g~~-------~~---~a~~~l~~~l~~~G~~~v~ 112 (138)
T 5nul_A 44 LNEDILILGCSAMTDEVL-EESEFEPFIEEISTKISGKKVALFGSYGWG-------DG---KWMRDFEERMNGYGCVVVE 112 (138)
T ss_dssp TTCSEEEEEECCBTTTBC-CTTTHHHHHHHHGGGCTTCEEEEEEEESSS-------CS---HHHHHHHHHHHHTTCEECS
T ss_pred hhCCEEEEEcCccCCCCC-ChHHHHHHHHHHHhhcCCCEEEEEEecCCC-------CC---hHHHHHHHHHHHCCCEEEC
Confidence 379999884431 11111 11157788887764 68888888864321 01 1122234556666766654
Q ss_pred C
Q 016237 161 P 161 (392)
Q Consensus 161 ~ 161 (392)
.
T Consensus 113 ~ 113 (138)
T 5nul_A 113 T 113 (138)
T ss_dssp C
T ss_pred C
Confidence 3
No 178
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=38.39 E-value=36 Score=27.07 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=23.6
Q ss_pred CCEEEEEecCCCCccch-H-HHHHHHHhCCCeEEEECCC
Q 016237 8 KRSVLLLCGDYMEDYEA-M-VPFQALLAFGVSVDAACPG 44 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~-~-~~~~~l~~ag~~v~~~s~~ 44 (392)
.+||+|+-+..+-.++- + .+.+.|.+.|.+++++...
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 35888887654433222 2 3456677789888887654
No 179
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=35.52 E-value=25 Score=31.93 Aligned_cols=88 Identities=11% Similarity=0.113 Sum_probs=49.4
Q ss_pred CCEEEEEecCCCCc-cchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCc
Q 016237 8 KRSVLLLCGDYMED-YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKY 86 (392)
Q Consensus 8 ~~kI~ill~~g~~~-~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 86 (392)
++|++|++-+.... ..+......|+++|+++.+....... .. ..+ ..+.....+
T Consensus 29 ~~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~---------------~~-----~~~-----~~~~~~~~~ 83 (332)
T 2bon_A 29 FPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKG---------------DA-----ARY-----VEEARKFGV 83 (332)
T ss_dssp -CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTT---------------HH-----HHH-----HHHHHHHTC
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcc---------------hH-----HHH-----HHHHHhcCC
Confidence 46898888653321 23455677888899988876543210 00 000 001111358
Q ss_pred cEEEEcCCCCcccccCCHHHHHHHHHHH----hCCCeEEEEchhhH
Q 016237 87 DGLVIPGGRAPEYLAMNDSVIDLVRKFS----NSGKTIASICHGQL 128 (392)
Q Consensus 87 D~iiipGG~~~~~~~~~~~l~~~l~~~~----~~~~~i~aic~G~~ 128 (392)
|.|++.||.|+- .+.++... ..+.+++.+=.|..
T Consensus 84 d~vvv~GGDGTl--------~~v~~~l~~~~~~~~~plgiiP~Gt~ 121 (332)
T 2bon_A 84 ATVIAGGGDGTI--------NEVSTALIQCEGDDIPALGILPLGTA 121 (332)
T ss_dssp SEEEEEESHHHH--------HHHHHHHHHCCSSCCCEEEEEECSSS
T ss_pred CEEEEEccchHH--------HHHHHHHhhcccCCCCeEEEecCcCH
Confidence 999999997643 23333333 45668887755653
No 180
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=35.22 E-value=2.2e+02 Score=24.60 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=60.8
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccE
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDG 88 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~ 88 (392)
++|+|++.+|-+.-+-......|...|++|+++-+.... . ..+...........|..+... ..+.....+|+
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~--~----~~~a~~~~~~~~~~g~~~~~~--~~~l~~~~~dl 157 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVK--M----LESITNELSLFSKTQGQQVSS--LKDLPTSPVDL 157 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCBCSS--C----CHHHHHHHHHHTTSSCEEESC--GGGSCSSCCSE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEecCCC--C----CHHHHHHHHHHHHcCCCcccc--hhhhccCCCCE
Confidence 589999999999999999999999999999998764211 0 000000000001112222111 01111013454
Q ss_pred EEEcCCCCcc-cccCCHHHHHHHHHHHhCCCeEEEEchhh
Q 016237 89 LVIPGGRAPE-YLAMNDSVIDLVRKFSNSGKTIASICHGQ 127 (392)
Q Consensus 89 iiipGG~~~~-~~~~~~~l~~~l~~~~~~~~~i~aic~G~ 127 (392)
||=.=|.|.. .+.....+.++|+...+.+.++.||--=+
T Consensus 158 IVDALG~G~~~~l~~~~~~~~lI~~iN~~~~~vvAVDiPS 197 (259)
T 3d3k_A 158 VINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPV 197 (259)
T ss_dssp EEEECCCTTCTTGGGSHHHHHHHHHHHHHCSCEEEESCCC
T ss_pred EEECCCCCCCCccCcchHHHHHHHHHHhCCCCEEEEECCC
Confidence 4321133322 23223567777777777788999987633
No 181
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=35.12 E-value=1.4e+02 Score=22.42 Aligned_cols=39 Identities=15% Similarity=0.078 Sum_probs=26.9
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCC
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKK 46 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~ 46 (392)
+++|+|+-...-..---..++..|.+.||++..+.|..+
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~ 42 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKG 42 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCS
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCC
Confidence 579999975433322334566777788999999988753
No 182
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=35.11 E-value=59 Score=32.46 Aligned_cols=62 Identities=21% Similarity=0.344 Sum_probs=44.0
Q ss_pred chHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCccEEEEcCCCCcccccC
Q 016237 23 EAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYDGLVIPGGRAPEYLAM 102 (392)
Q Consensus 23 e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D~iiipGG~~~~~~~~ 102 (392)
++...+..|.++|+.+++++++. + ...|++||+|.-. .-
T Consensus 426 ~~~~~y~al~~~g~~vd~v~~~~----------------------------------~--l~~y~lvv~P~~~-----~~ 464 (645)
T 1kwg_A 426 LVYLFYSALRRLGLDVDVVPPGA----------------------------------S--LRGYAFAVVPSLP-----IV 464 (645)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTS----------------------------------C--CTTCSEEEESCCS-----SC
T ss_pred HHHHHHHHHHHhCCCeeEECCCC----------------------------------C--cccCCEEEEechh-----hc
Confidence 46678899999999999998752 1 2379999999853 23
Q ss_pred CHHHHHHHHHHHhCCCeEEEEchhh
Q 016237 103 NDSVIDLVRKFSNSGKTIASICHGQ 127 (392)
Q Consensus 103 ~~~l~~~l~~~~~~~~~i~aic~G~ 127 (392)
++.+.+.|++ +.|..|++-.+|.
T Consensus 465 ~~~~~~~L~~--~GG~lv~~~~sg~ 487 (645)
T 1kwg_A 465 REEALEAFRE--AEGPVLFGPRSGS 487 (645)
T ss_dssp CHHHHHHHHT--CSSCEEECTTTTC
T ss_pred CHHHHHHHHh--CCCEEEEeccCCc
Confidence 4677777777 5566666555443
No 183
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=32.90 E-value=64 Score=24.19 Aligned_cols=40 Identities=10% Similarity=0.092 Sum_probs=25.1
Q ss_pred CCccEEEEcCCCCcccccCCHH--HHHHHHHHHh--CCCeEEEEch
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSN--SGKTIASICH 125 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~--l~~~l~~~~~--~~~~i~aic~ 125 (392)
.+||.|++....-. -...+. +.+|+.+... ++|+++.+++
T Consensus 45 ~~~d~vi~g~p~y~--~~~~~~~~~~~fl~~l~~~l~~k~~~~~~t 88 (137)
T 2fz5_A 45 ASKDVILLGCPAMG--SEELEDSVVEPFFTDLAPKLKGKKVGLFGS 88 (137)
T ss_dssp HTCSEEEEECCCBT--TTBCCHHHHHHHHHHHGGGCSSCEEEEEEE
T ss_pred hcCCEEEEEccccC--CCCCCHHHHHHHHHHhhhhcCCCEEEEEEe
Confidence 37899999553211 112344 8888887644 6888887775
No 184
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=31.22 E-value=1.9e+02 Score=25.51 Aligned_cols=30 Identities=13% Similarity=0.038 Sum_probs=20.3
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEE
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIA 121 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~ 121 (392)
.+.|+|+++-... ...+.+.++.++|+.+.
T Consensus 64 ~~~DvViiatp~~--------~h~~~~~~al~aG~~Vi 93 (304)
T 3bio_A 64 ESVDVALVCSPSR--------EVERTALEILKKGICTA 93 (304)
T ss_dssp SSCCEEEECSCHH--------HHHHHHHHHHTTTCEEE
T ss_pred CCCCEEEECCCch--------hhHHHHHHHHHcCCeEE
Confidence 4789999977421 22455667777888775
No 185
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=30.91 E-value=73 Score=26.03 Aligned_cols=29 Identities=28% Similarity=0.383 Sum_probs=18.2
Q ss_pred CCccEEEEcCCCCccc-ccCCHHHHHHHHHHHh
Q 016237 84 SKYDGLVIPGGRAPEY-LAMNDSVIDLVRKFSN 115 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~-~~~~~~l~~~l~~~~~ 115 (392)
.++|+||+.- |.+ ..-...+.+||.+...
T Consensus 66 ~~AD~iV~~s---P~y~~~~p~~lK~~iD~~~~ 95 (192)
T 3fvw_A 66 QEADAIWIFS---PVYNYAIPGPVKNLLDWLSR 95 (192)
T ss_dssp HHCSEEEEEC---CCBTTBCCHHHHHHHHHHTS
T ss_pred HhCCEEEEEC---cccccCCCHHHHHHHHHhhc
Confidence 4789999944 222 2234667778777764
No 186
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=30.89 E-value=27 Score=30.96 Aligned_cols=87 Identities=13% Similarity=0.071 Sum_probs=52.4
Q ss_pred CCEEEEEecCC---CCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC
Q 016237 8 KRSVLLLCGDY---MEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS 84 (392)
Q Consensus 8 ~~kI~ill~~g---~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (392)
+++|++++.+- |...-+.+..+.+++.|+++.+......+ -... ..++.+-..
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~----------------~~~~--------~~i~~~~~~ 58 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDI----------------PNQL--------SQIENMVTK 58 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCH----------------HHHH--------HHHHHHHHH
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCH----------------HHHH--------HHHHHHHHc
Confidence 57899999753 33334556777788899999888754321 0000 011111123
Q ss_pred CccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 85 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 85 ~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
.+|+||+.+.. .......++++.+.+.|+..+..
T Consensus 59 ~vdgiIi~~~~-------~~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 59 GVKVLVIASID-------GTTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp TCSEEEECCSS-------GGGGHHHHHHHHHTTCEEEEESS
T ss_pred CCCEEEEEcCC-------chhHHHHHHHHHHCCCCEEEECC
Confidence 68999996642 12334566777788999988764
No 187
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=30.42 E-value=2.2e+02 Score=24.07 Aligned_cols=38 Identities=11% Similarity=-0.030 Sum_probs=25.9
Q ss_pred CCCEEEEEecCC---CCccchHHHHHHHHhCCCeEEEECCC
Q 016237 7 GKRSVLLLCGDY---MEDYEAMVPFQALLAFGVSVDAACPG 44 (392)
Q Consensus 7 ~~~kI~ill~~g---~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (392)
++++|++++.+- |...-+.+..+.+.+.||++.+....
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 47 (277)
T 3cs3_A 7 QTNIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGK 47 (277)
T ss_dssp CCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEEST
T ss_pred CCcEEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357899998642 33333456667778899999887654
No 188
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=30.28 E-value=64 Score=23.88 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=29.1
Q ss_pred hhHHHHHHcCCeeeCCCCCceEEEcCCeEEccCCCChHHHHHHH
Q 016237 339 AVKLNVLLAGASWLEPDPIDRCFTDGNLVSGAAWPGHPEFISQL 382 (392)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~vv~dg~lvT~~g~~~~~~~~~~l 382 (392)
...+.++..|+...+ .++.||+++.++...+-.+++.++
T Consensus 63 ~V~~~L~~~G~~~LP-----~~~VDGevv~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 63 TVNDFLQKHGADALP-----ITLVDGEIAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp HHHHHHHTTCGGGCS-----EEEETTEEEECSSCCCHHHHHHHH
T ss_pred HHHHHHHHcCcccCC-----EEEECCEEEEeccCCCHHHHHHHh
Confidence 345666667766654 689999999999988877776553
No 189
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=29.28 E-value=39 Score=29.24 Aligned_cols=40 Identities=23% Similarity=0.196 Sum_probs=25.0
Q ss_pred CCCEEEEEecCCCCcc---c-hHHHHHHHHhCCCeEEEECCCCC
Q 016237 7 GKRSVLLLCGDYMEDY---E-AMVPFQALLAFGVSVDAACPGKK 46 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~---e-~~~~~~~l~~ag~~v~~~s~~~~ 46 (392)
.++||++|...--... - +....+.+.+.|.+++++....-
T Consensus 33 ~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~~ 76 (247)
T 2q62_A 33 HRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGL 76 (247)
T ss_dssp SCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTC
T ss_pred CCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhcC
Confidence 3579999886432211 1 22244556678999999987653
No 190
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=28.45 E-value=1.9e+02 Score=21.91 Aligned_cols=98 Identities=10% Similarity=0.059 Sum_probs=44.5
Q ss_pred CCccEEEEcCC-CCccccc-CCHHHHHHHHHH--HhCCCeEEEEchhhHHhhcCcccCCeeEecCCCcHHHHHHCCCeEE
Q 016237 84 SKYDGLVIPGG-RAPEYLA-MNDSVIDLVRKF--SNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWI 159 (392)
Q Consensus 84 ~~~D~iiipGG-~~~~~~~-~~~~l~~~l~~~--~~~~~~i~aic~G~~~La~agll~g~~~T~~~~~~~~l~~~~~~~~ 159 (392)
.+||.|++... ++.-.+. .-..+.++++.. .-+++.++.++.|---.. .-+.+.....+.|++.|...+
T Consensus 45 ~~~d~vi~g~pt~g~g~~p~~~~~f~~~l~~~~~~l~~~~~avfg~G~~~y~-------~~~~a~~~l~~~l~~~G~~~~ 117 (147)
T 2hna_A 45 PASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYD-------TFCGAIDKLEAELKNSGAKQT 117 (147)
T ss_dssp CSEEEEEEECCTTTTCCTTSSCHHHHHHHHHHCCCTTEEEEEEESCCHHHHS-------CSSSCTTHHHHHHHHHTCEEC
T ss_pred ccCCeEEEEECccCCCCCChhHHHHHHHHHhhccccCCCEEEEEecccCCHH-------HHHHHHHHHHHHHHHcCCeEe
Confidence 36898888543 2221111 224455555543 234667777776643111 001112223455666676655
Q ss_pred cCCCcceeeecCceEecCCCCChHHHHHHHHHHh
Q 016237 160 EPETMAACVVDGNIITGATYEGHPEFIRLFLKAL 193 (392)
Q Consensus 160 ~~~~~~~~v~dg~iiT~~g~~s~~~~~~~~i~~l 193 (392)
... +..|..- +..-.....++...+.+.+
T Consensus 118 ~~~----~~~d~~~-~~~~~~~~~~w~~~~~~~l 146 (147)
T 2hna_A 118 GET----LKINILD-HDIPEDPAEEWLGSWVNLL 146 (147)
T ss_dssp SSC----BCCCCSS-CCSSCSCCHHHHHHHHHHH
T ss_pred eee----EEEecCC-CCCcHHHHHHHHHHHHHHh
Confidence 443 2223211 1122233455666665543
No 191
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=28.04 E-value=84 Score=26.20 Aligned_cols=43 Identities=14% Similarity=0.096 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEecCCCCcc-chHHHHHHHHhCCCeEEEECCCCC
Q 016237 4 SKGGKRSVLLLCGDYMEDY-EAMVPFQALLAFGVSVDAACPGKK 46 (392)
Q Consensus 4 m~~~~~kI~ill~~g~~~~-e~~~~~~~l~~ag~~v~~~s~~~~ 46 (392)
|..++|||++-+.=+.... ......+.|.+.|++|+++-....
T Consensus 3 m~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp CCCTTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCcCCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 3344689998888777777 788889999999999998865543
No 192
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=28.01 E-value=87 Score=25.97 Aligned_cols=36 Identities=14% Similarity=-0.016 Sum_probs=27.6
Q ss_pred CEEEEEecC-CCCccchHHHHHHHHhCCCeEEEECCC
Q 016237 9 RSVLLLCGD-YMEDYEAMVPFQALLAFGVSVDAACPG 44 (392)
Q Consensus 9 ~kI~ill~~-g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (392)
.||.+...+ .............|+.+||+|..++.+
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467776665 355677788889999999999988764
No 193
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=27.51 E-value=72 Score=28.77 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=22.8
Q ss_pred CccEEEEeCCCCCc----chhHHHHHHHHhcCCeEEEEcCC
Q 016237 201 DKRILFLCGDYMED----YEVAVPFQSLQALECHVDAVCPK 237 (392)
Q Consensus 201 ~~~v~ill~~~~~~----~e~~~~~~~~~~~~~~v~~~s~~ 237 (392)
|+++.+++.+..-. .........|++.|+++.+....
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~ 64 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATE 64 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECC
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEec
Confidence 45677776654321 12345677788888888877543
No 194
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=27.27 E-value=39 Score=29.06 Aligned_cols=85 Identities=11% Similarity=0.054 Sum_probs=50.2
Q ss_pred CCCEEEEEecCCCC---ccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCC
Q 016237 7 GKRSVLLLCGDYME---DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP 83 (392)
Q Consensus 7 ~~~kI~ill~~g~~---~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (392)
++++|++++.+-.+ ..=+.+..+.+.+.|+++.+......+ -.. ...+..+..
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~----------------~~~--------~~~~~~l~~ 61 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANADI----------------ERE--------KTLLRAIGS 61 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTCH----------------HHH--------HHHHHHHHT
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCCH----------------HHH--------HHHHHHHHh
Confidence 46789999975322 233455667777899999887755321 000 001111112
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
..+|+||+.+... ...+++..+.+.|+..+..
T Consensus 62 ~~vdgiIi~~~~~----------~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 62 RGFDGLILQSFSN----------PQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp TTCSEEEEESSCC----------HHHHHHHHTTSSCEEEESC
T ss_pred CCCCEEEEecCCc----------HHHHHHHHHCCCCEEEEec
Confidence 3689999976421 3455666667888887763
No 195
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=27.20 E-value=92 Score=25.20 Aligned_cols=40 Identities=25% Similarity=0.292 Sum_probs=26.2
Q ss_pred CCccEEEEcCCCCccc-ccCCHHHHHHHHHHHh------CCCeEEEEchh
Q 016237 84 SKYDGLVIPGGRAPEY-LAMNDSVIDLVRKFSN------SGKTIASICHG 126 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~-~~~~~~l~~~l~~~~~------~~~~i~aic~G 126 (392)
.++|+||+..- .+ ..-...+..||.+... ++|+++.++++
T Consensus 71 ~~aD~ii~~sP---~y~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~ 117 (193)
T 1rtt_A 71 RAADALLFATP---EYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGAS 117 (193)
T ss_dssp HHCSEEEEECC---EETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEEC
T ss_pred HhCCEEEEEcc---ccccCcCHHHHHHHHHhccccCcccCCCeEEEEEeC
Confidence 37899999542 22 1234677888888753 57887777764
No 196
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=26.92 E-value=50 Score=26.55 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=27.8
Q ss_pred CCCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEchh
Q 016237 83 PSKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 126 (392)
Q Consensus 83 ~~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~G 126 (392)
..+||.|++.... -.-.-.+.+..||.+..-++|.++.+|+.
T Consensus 85 l~~yD~iilg~Pv--y~g~~~~~~~~fl~~~~l~gk~v~~f~t~ 126 (171)
T 4ici_A 85 IGTYDVVFIGYPI--WWDLAPRIINTFIEGHSLKGKTVVPFATS 126 (171)
T ss_dssp GGGCSEEEEEEEC--BTTBCCHHHHHHHHHSCCTTSEEEEEEEC
T ss_pred HhHCCEEEEeccc--ccCCchHHHHHHHHHcCCCcCEEEEEEec
Confidence 4589999994321 11123467889998875568887777763
No 197
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=26.90 E-value=74 Score=23.74 Aligned_cols=40 Identities=25% Similarity=0.302 Sum_probs=29.3
Q ss_pred chhHHHHHHcCCeeeCCCCCceEEEcCCeEEccCCCChHHHHHHH
Q 016237 338 PAVKLNVLLAGASWLEPDPIDRCFTDGNLVSGAAWPGHPEFISQL 382 (392)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~vv~dg~lvT~~g~~~~~~~~~~l 382 (392)
+...+.++..|+...+ .++.||+++.++...+-.+++.++
T Consensus 59 ~~V~~~L~~~G~~~LP-----~~~VDGevv~~G~yPt~eEl~~~l 98 (110)
T 3kgk_A 59 EKVKAFIEASGAEGLP-----LLLLDGETVMAGRYPKRAELARWF 98 (110)
T ss_dssp HHHHHHHHHHCGGGCC-----EEEETTEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHHHcCcccCC-----EEEECCEEEEeccCCCHHHHHHHh
Confidence 3455667777766654 689999999999988877776543
No 198
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=26.50 E-value=1.6e+02 Score=24.01 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=28.9
Q ss_pred CCccEEEEcCCCCccc-ccCCHHHHHHHHHHHhCCCeEEEEchhhHHhhcCcccCCeeE
Q 016237 84 SKYDGLVIPGGRAPEY-LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKC 141 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~-~~~~~~l~~~l~~~~~~~~~i~aic~G~~~La~agll~g~~~ 141 (392)
.+.|.||+.- |.+ ..-...+..||.+....|.....-..| ..|+|+||++
T Consensus 72 ~~AD~iV~~~---P~y~~~~pa~LK~~iD~v~~~g~~~~~~~~~-----~~~~l~gK~~ 122 (196)
T 3lcm_A 72 TWADHLIFIF---PIWWSGMPAILKGFIDRVFVADFAYSYKKVG-----LEGHLQGKSA 122 (196)
T ss_dssp HHCSEEEEEE---ECBTTBCCHHHHHHHHHHSCBTTTEEECSSS-----EEESCTTCEE
T ss_pred HhCCEEEEEC---chhhccccHHHHHHHHHHccCCcceecCCCC-----cccCCCCCEE
Confidence 3689998843 222 234567889999987665433221111 2356777764
No 199
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=26.46 E-value=1.3e+02 Score=22.29 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=25.1
Q ss_pred CCCEEEEEecCCCCccch--HHHHHHHHhCCCeEEE
Q 016237 7 GKRSVLLLCGDYMEDYEA--MVPFQALLAFGVSVDA 40 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~e~--~~~~~~l~~ag~~v~~ 40 (392)
+++||++++..|....-+ .-..+.|.+.|+++++
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V 55 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVEL 55 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 357899999999886653 5566778888876544
No 200
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=26.42 E-value=43 Score=26.59 Aligned_cols=41 Identities=15% Similarity=0.274 Sum_probs=27.1
Q ss_pred CCCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 83 PSKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 83 ~~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
..+||.|++....- .-.-.+.+.+||++..-++|.++.+|+
T Consensus 76 l~~yd~iilG~P~~--~g~~~~~~~~fl~~~~l~gk~v~~f~t 116 (162)
T 3klb_A 76 PEKYEVLFVGFPVW--WYIAPTIINTFLESYDFAGKIVVPFAT 116 (162)
T ss_dssp GGGCSEEEEEEECB--TTBCCHHHHHHHHTSCCTTCEEEEEEE
T ss_pred hhhCCEEEEEcccc--cCCCCHHHHHHHHhcCCCCCEEEEEEE
Confidence 45899999943211 112346788888876556888877775
No 201
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=26.37 E-value=60 Score=26.91 Aligned_cols=37 Identities=5% Similarity=-0.014 Sum_probs=30.8
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCC
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPG 44 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (392)
+|||++.+.-+....-.....+.|.+.|++|+++-..
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEECH
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEch
Confidence 5789999987777777888889999999999987654
No 202
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=25.67 E-value=1.9e+02 Score=21.20 Aligned_cols=83 Identities=13% Similarity=0.021 Sum_probs=45.4
Q ss_pred CCCEEEEEecCCCCccchHH-HHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCC
Q 016237 7 GKRSVLLLCGDYMEDYEAMV-PFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSK 85 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~e~~~-~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 85 (392)
+.+||++++.-|....=+.. ..+...+.|.++++.+..-. .+.+ ..++
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~------------------------------~~~~-~~~~ 53 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYG------------------------------AHYD-IMGV 53 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETT------------------------------SCTT-TGGG
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchH------------------------------HHHh-hccC
Confidence 35789999998864322222 22333345888888552210 0122 1247
Q ss_pred ccEEEEcCCCCcccccCCHHHHHHHHHHH-hCCCeEEEEchhhH
Q 016237 86 YDGLVIPGGRAPEYLAMNDSVIDLVRKFS-NSGKTIASICHGQL 128 (392)
Q Consensus 86 ~D~iiipGG~~~~~~~~~~~l~~~l~~~~-~~~~~i~aic~G~~ 128 (392)
||+|++ |...++ ..+-+++.. +.++||..|-.-..
T Consensus 54 ~DvvLL--gPQV~y------~~~~ik~~~~~~~ipV~vI~~~~Y 89 (108)
T 3nbm_A 54 YDLIIL--APQVRS------YYREMKVDAERLGIQIVATRGMEY 89 (108)
T ss_dssp CSEEEE--CGGGGG------GHHHHHHHHTTTTCEEEECCHHHH
T ss_pred CCEEEE--ChHHHH------HHHHHHHHhhhcCCcEEEeCHHHh
Confidence 999999 322222 223344444 35899998876544
No 203
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=25.49 E-value=52 Score=28.42 Aligned_cols=90 Identities=13% Similarity=0.103 Sum_probs=51.8
Q ss_pred CCEEEEEecCC---CCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCC
Q 016237 8 KRSVLLLCGDY---MEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPS 84 (392)
Q Consensus 8 ~~kI~ill~~g---~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (392)
.++|++++.+- |...=+.+..+.+.+.|+++.+......+ -.. ...++.+...
T Consensus 15 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~----------------~~~--------~~~~~~l~~~ 70 (298)
T 3tb6_A 15 NKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNP----------------DNE--------RRGLENLLSQ 70 (298)
T ss_dssp CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCH----------------HHH--------HHHHHHHHHT
T ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCCh----------------HHH--------HHHHHHHHHC
Confidence 36899998753 33334556777788899999988655321 000 0011111123
Q ss_pred CccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 85 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 85 ~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
.+|+||+.+..... .......++++.+.+.|+..+..
T Consensus 71 ~vdgiIi~~~~~~~----~~~~~~~~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 71 HIDGLIVEPTKSAL----QTPNIGYYLNLEKNGIPFAMINA 107 (298)
T ss_dssp CCSEEEECCSSTTS----CCTTHHHHHHHHHTTCCEEEESS
T ss_pred CCCEEEEecccccc----cCCcHHHHHHHHhcCCCEEEEec
Confidence 68999997753211 01123455666677999887763
No 204
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=25.43 E-value=96 Score=23.66 Aligned_cols=44 Identities=16% Similarity=0.378 Sum_probs=23.5
Q ss_pred CC-ccEEEEcCCC-CcccccCCHHHHHHHHHHHh---CCCeEEEEchhh
Q 016237 84 SK-YDGLVIPGGR-APEYLAMNDSVIDLVRKFSN---SGKTIASICHGQ 127 (392)
Q Consensus 84 ~~-~D~iiipGG~-~~~~~~~~~~l~~~l~~~~~---~~~~i~aic~G~ 127 (392)
.+ ||.|++.... +...-.-...+.+|+.+... +++.++.+|+|.
T Consensus 46 ~~~~d~ii~~~p~y~~g~~~~p~~~~~fl~~l~~~~l~~k~~~v~~~g~ 94 (147)
T 1f4p_A 46 FEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGD 94 (147)
T ss_dssp TTTCSEEEEEECEECSSSCEECTTTHHHHHTGGGSCCTTCEEEEEEEEC
T ss_pred cCcCCEEEEEeCCCCCCCcCCChhHHHHHHHHHhcccCCCEEEEEeecC
Confidence 36 8999884421 11000012356666665533 477888777753
No 205
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=25.27 E-value=85 Score=28.79 Aligned_cols=42 Identities=10% Similarity=-0.111 Sum_probs=25.2
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHH---h---CCCeEEEEchhh
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFS---N---SGKTIASICHGQ 127 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~---~---~~~~i~aic~G~ 127 (392)
.++|+|++..-.-. -...+.+.+|+.+.. . ++|+++.+|++.
T Consensus 306 ~~~d~iiigsP~y~--~~~~~~~k~~ld~l~~~~~~~l~~k~~~~~~~~g 353 (404)
T 2ohh_A 306 LESGAIALGAPTIY--DEPYPSVGDLLMYLRGLKFNRTLTRKALVFGSMG 353 (404)
T ss_dssp HTCSEEEEECCEET--TEECTHHHHHHHHHHHHCGGGTCCEEEEEEEEES
T ss_pred HHCCEEEEECcccc--ccchHHHHHHHHHhhhccccccCCCEEEEEEecC
Confidence 37999999553111 112245666666554 3 688888888654
No 206
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=25.19 E-value=1.1e+02 Score=26.38 Aligned_cols=37 Identities=8% Similarity=-0.295 Sum_probs=24.2
Q ss_pred CCEEEEEecC-C------CCccchHHHHHHHHhCCCeEEEECCC
Q 016237 8 KRSVLLLCGD-Y------MEDYEAMVPFQALLAFGVSVDAACPG 44 (392)
Q Consensus 8 ~~kI~ill~~-g------~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (392)
+++|++++.+ - |...=+.+..+.+++.||++.+....
T Consensus 4 s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 47 (287)
T 3bbl_A 4 SFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFPFS 47 (287)
T ss_dssp CCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred eeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 5689999865 2 22223445667777899998876543
No 207
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=24.85 E-value=30 Score=29.98 Aligned_cols=88 Identities=13% Similarity=-0.061 Sum_probs=50.1
Q ss_pred CCCEEEEEecCCCC---ccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCC
Q 016237 7 GKRSVLLLCGDYME---DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP 83 (392)
Q Consensus 7 ~~~kI~ill~~g~~---~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (392)
++++|++++.+-.+ ..=+.+..+.+.+.|+++.+......+ -.. . ..+..+..
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~----------------~~~-----~---~~~~~l~~ 62 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNSR----------------ISE-----R---EQILEFVH 62 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCH----------------HHH-----H---HHHHHHHH
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCH----------------HHH-----H---HHHHHHHH
Confidence 35789999975333 223455667777899999887654321 000 0 01111112
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEEEch
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 125 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~aic~ 125 (392)
..+|+||+.+... ......++++.+.+.|+..+..
T Consensus 63 ~~vdgiI~~~~~~-------~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 63 LKVDAIFITTLDD-------VYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp TTCSEEEEECSCT-------TTTHHHHHHHHHTTCCEEEESS
T ss_pred cCCCEEEEecCCh-------HHHHHHHHHHHHcCCCEEEecC
Confidence 3689999965321 2233456667777999888753
No 208
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=24.63 E-value=64 Score=26.55 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=22.4
Q ss_pred CEEEEEecCCCC---ccchHHHHHHHHhCCCeEEEECCC
Q 016237 9 RSVLLLCGDYME---DYEAMVPFQALLAFGVSVDAACPG 44 (392)
Q Consensus 9 ~kI~ill~~g~~---~~e~~~~~~~l~~ag~~v~~~s~~ 44 (392)
|||+||+..--. ..-++.....+.+.+++++++...
T Consensus 3 k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~ 41 (190)
T 3u7r_A 3 KTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIG 41 (190)
T ss_dssp EEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGG
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecc
Confidence 689999864222 223444444455678899988764
No 209
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=24.62 E-value=92 Score=27.46 Aligned_cols=78 Identities=19% Similarity=0.336 Sum_probs=49.0
Q ss_pred ccEEEEeCCCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCcCE
Q 016237 202 KRILFLCGDYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGYDA 281 (392)
Q Consensus 202 ~~v~ill~~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 281 (392)
+++.++..+... .....+.|++.|+++.+...... .+ .++|+
T Consensus 30 mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~~~~~~------------------------------~~-----~~~Dl 71 (278)
T 1z0s_A 30 MRAAVVYKTDGH---VKRIEEALKRLEVEVELFNQPSE------------------------------EL-----ENFDF 71 (278)
T ss_dssp CEEEEEESSSTT---HHHHHHHHHHTTCEEEEESSCCG------------------------------GG-----GGSSE
T ss_pred eEEEEEeCCcHH---HHHHHHHHHHCCCEEEEcccccc------------------------------cc-----CCCCE
Confidence 357777665443 66678889999988766532100 01 25799
Q ss_pred EEEcCCCChhhccCChHHHHHHHHHHHcCCcEEEEehHHHHHHHcCCCCC
Q 016237 282 LVVPGGRAPEYLALNENVIALVKDFMEAKKPVASICHGQQILAAAGVLKG 331 (392)
Q Consensus 282 viipgg~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~G~~~La~aglL~g 331 (392)
+|+-||.|. ++...+.+... .||.+|-.| .-|.|..
T Consensus 72 vIvlGGDGT--------~L~aa~~~~~~-~PilGIN~G-----~lGFLt~ 107 (278)
T 1z0s_A 72 IVSVGGDGT--------ILRILQKLKRC-PPIFGINTG-----RVGLLTH 107 (278)
T ss_dssp EEEEECHHH--------HHHHHTTCSSC-CCEEEEECS-----SSCTTCC
T ss_pred EEEECCCHH--------HHHHHHHhCCC-CcEEEECCC-----CCccccc
Confidence 999998663 33334444444 899999887 4455554
No 210
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=24.37 E-value=57 Score=28.94 Aligned_cols=39 Identities=15% Similarity=0.007 Sum_probs=27.4
Q ss_pred CCEEEEEecC---------------CCCc--cchHHHHHHHHhCCCeEEEECCCCC
Q 016237 8 KRSVLLLCGD---------------YMED--YEAMVPFQALLAFGVSVDAACPGKK 46 (392)
Q Consensus 8 ~~kI~ill~~---------------g~~~--~e~~~~~~~l~~ag~~v~~~s~~~~ 46 (392)
+|||+++... .... .-+......|.+.|++|.+++....
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 58 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGS 58 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTS
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 5689999865 1111 2344567788889999999998754
No 211
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=22.66 E-value=54 Score=26.29 Aligned_cols=89 Identities=10% Similarity=0.035 Sum_probs=51.0
Q ss_pred CCEEEEEecCCCCc---cchHHHHHHHHhCCC-eEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCC
Q 016237 8 KRSVLLLCGDYMED---YEAMVPFQALLAFGV-SVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP 83 (392)
Q Consensus 8 ~~kI~ill~~g~~~---~e~~~~~~~l~~ag~-~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (392)
+.||+|+....... .=+.+..+.|.+.|. +++++...| ...+.+.... +.
T Consensus 17 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPG---------------------afEiP~aak~-la---- 70 (160)
T 2c92_A 17 GVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLG---------------------AIEIPVVAQE-LA---- 70 (160)
T ss_dssp TCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESS---------------------GGGHHHHHHH-HH----
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCc---------------------HHHHHHHHHH-HH----
Confidence 46899999875543 346678899999886 555554322 1112221111 11
Q ss_pred CCccEEEEcCCC--C-c-cc-ccCCHHHHHHHHHHHhCCCeEEE
Q 016237 84 SKYDGLVIPGGR--A-P-EY-LAMNDSVIDLVRKFSNSGKTIAS 122 (392)
Q Consensus 84 ~~~D~iiipGG~--~-~-~~-~~~~~~l~~~l~~~~~~~~~i~a 122 (392)
..||+|+.-|-- | . .+ +..+....-+.+-..+.++||+.
T Consensus 71 ~~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~ 114 (160)
T 2c92_A 71 RNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIAN 114 (160)
T ss_dssp TSCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred hcCCEEEEEeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 149999988742 2 1 11 33344555666666777887654
No 212
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=22.58 E-value=69 Score=27.75 Aligned_cols=37 Identities=19% Similarity=0.081 Sum_probs=28.3
Q ss_pred CCEEEEEecCC-CCccchHHHHHHHHhCCCeEEEECCC
Q 016237 8 KRSVLLLCGDY-MEDYEAMVPFQALLAFGVSVDAACPG 44 (392)
Q Consensus 8 ~~kI~ill~~g-~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (392)
.+||.+...+| ............|+.+||+|..++.+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 45777776653 55667788889999999999888765
No 213
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=22.57 E-value=51 Score=26.32 Aligned_cols=37 Identities=16% Similarity=0.033 Sum_probs=24.4
Q ss_pred CccEEEEe-CCCCCcchhHHHHHHHHhcCCeEEEEcCC
Q 016237 201 DKRILFLC-GDYMEDYEVAVPFQSLQALECHVDAVCPK 237 (392)
Q Consensus 201 ~~~v~ill-~~~~~~~e~~~~~~~~~~~~~~v~~~s~~ 237 (392)
..++.+.. .....+.........|+..||+|......
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 34555544 34455556667888899999998877543
No 214
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=22.43 E-value=1.2e+02 Score=25.37 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=30.0
Q ss_pred CCEEEEEecCCCCccc-hHHHHHHHHhCCCeEEEECCCC
Q 016237 8 KRSVLLLCGDYMEDYE-AMVPFQALLAFGVSVDAACPGK 45 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e-~~~~~~~l~~ag~~v~~~s~~~ 45 (392)
+|||++-+.=+..... .....+.|.+.|++|+++-...
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 5799988877666664 7888999999999999875543
No 215
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=22.28 E-value=2.6e+02 Score=21.27 Aligned_cols=82 Identities=15% Similarity=0.131 Sum_probs=44.5
Q ss_pred CCCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCc
Q 016237 7 GKRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKY 86 (392)
Q Consensus 7 ~~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 86 (392)
.+++|+|+-...-...==......|.+.||++.-+.++.. .+ .|.+.-+ +++++. ...
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~----------------~i---~G~~~~~--s~~el~-~~v 70 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD----------------EI---EGLKCYR--SVRELP-KDV 70 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS----------------EE---TTEECBS--SGGGSC-TTC
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCC----------------eE---CCeeecC--CHHHhC-CCC
Confidence 3689999965322211112334557788999887777642 12 2333322 345553 357
Q ss_pred cEEEEcCCCCcccccCCHHHHHHHHHHHhCCC
Q 016237 87 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGK 118 (392)
Q Consensus 87 D~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~ 118 (392)
|++++.=- .+...+.+++..+.+.
T Consensus 71 Dlvii~vp--------~~~v~~v~~~~~~~g~ 94 (138)
T 1y81_A 71 DVIVFVVP--------PKVGLQVAKEAVEAGF 94 (138)
T ss_dssp CEEEECSC--------HHHHHHHHHHHHHTTC
T ss_pred CEEEEEeC--------HHHHHHHHHHHHHcCC
Confidence 88888321 2455556666665554
No 216
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=22.25 E-value=79 Score=25.23 Aligned_cols=93 Identities=17% Similarity=0.170 Sum_probs=53.4
Q ss_pred CEEEEEecCCCCc---cchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCC--CCC
Q 016237 9 RSVLLLCGDYMED---YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDE--IDP 83 (392)
Q Consensus 9 ~kI~ill~~g~~~---~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~ 83 (392)
.||+|+....... .=+.+..+.|.+.|.+++++...|. ..+.+....-... ...
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGa---------------------fEiP~aa~~la~~~~~~~ 71 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGA---------------------LEIPATISFALDGADNGG 71 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSG---------------------GGHHHHHHHHHHHHHTTC
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcH---------------------HHHHHHHHHHHhhccccC
Confidence 5899999875543 3466788999999977777765431 1111111111110 012
Q ss_pred CCccEEEEcCCC--C--ccc-ccCCHHHHHHHHHHHhCCCeEEE
Q 016237 84 SKYDGLVIPGGR--A--PEY-LAMNDSVIDLVRKFSNSGKTIAS 122 (392)
Q Consensus 84 ~~~D~iiipGG~--~--~~~-~~~~~~l~~~l~~~~~~~~~i~a 122 (392)
.+||+|+.-|-- | ..+ ...+.....+.+-..+.++||+.
T Consensus 72 ~~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl~~vsl~~~vPV~~ 115 (157)
T 2i0f_A 72 TEYDGFVALGTVIRGETYHFDIVSNESCRALTDLSVEESIAIGN 115 (157)
T ss_dssp CCCSEEEEEEEEECCSSSTTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 479999988742 2 111 23344556666666778888653
No 217
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=22.23 E-value=98 Score=26.83 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=31.6
Q ss_pred CEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCC
Q 016237 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKK 46 (392)
Q Consensus 9 ~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~ 46 (392)
|||++-==||....-+..+.+.|++.| +|.++.|...
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g-~V~VVAP~~~ 38 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 577666668999999999999999998 9999999754
No 218
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.96 E-value=1.2e+02 Score=22.20 Aligned_cols=36 Identities=14% Similarity=0.012 Sum_probs=24.1
Q ss_pred CCEEEEEecCCCCccc-hHHHHHHHHhCCCeEEEECC
Q 016237 8 KRSVLLLCGDYMEDYE-AMVPFQALLAFGVSVDAACP 43 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e-~~~~~~~l~~ag~~v~~~s~ 43 (392)
++||++++..|....= ..-..+.+.+.|+++++...
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 5689999999886541 12345566678887766544
No 219
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=21.77 E-value=1.9e+02 Score=26.32 Aligned_cols=41 Identities=7% Similarity=0.008 Sum_probs=26.8
Q ss_pred CCccEEEEcCCCCcccccCCHHHHHHHHHHHh---CCCeEEEEchh
Q 016237 84 SKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSN---SGKTIASICHG 126 (392)
Q Consensus 84 ~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~---~~~~i~aic~G 126 (392)
.+||+|++....-.. ...+.+.+++.+... ++|.++.+|+.
T Consensus 302 ~~~d~ii~gsp~~~~--~~~~~~~~~l~~l~~~~l~~k~~~~f~t~ 345 (402)
T 1e5d_A 302 SDAGAVIVGSPTHNN--GILPYVAGTLQYIKGLRPQNKIGGAFGSF 345 (402)
T ss_dssp HTCSEEEEECCCBTT--BCCHHHHHHHHHHHHTCCCSCEEEEEEEE
T ss_pred HHCCEEEEECCccCC--CchHHHHHHHHHhhhcccCCCEEEEEEcC
Confidence 379999997652111 123467777777654 68888888763
No 220
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=21.74 E-value=2.9e+02 Score=24.46 Aligned_cols=92 Identities=16% Similarity=-0.006 Sum_probs=48.4
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCCCCCCCCCCccccCCCCcccccccccCccccCcCcCCCCCCCcc
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPSKYD 87 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~D 87 (392)
+|||.|+- .-..-.......|.+.|++|...-....+.. . ......|..+......+++...++|
T Consensus 4 ~~~i~~iG---iGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~-----------~-~~L~~~gi~v~~g~~~~~l~~~~~d 68 (326)
T 3eag_A 4 MKHIHIIG---IGGTFMGGLAAIAKEAGFEVSGCDAKMYPPM-----------S-TQLEALGIDVYEGFDAAQLDEFKAD 68 (326)
T ss_dssp CCEEEEES---CCSHHHHHHHHHHHHTTCEEEEEESSCCTTH-----------H-HHHHHTTCEEEESCCGGGGGSCCCS
T ss_pred CcEEEEEE---ECHHHHHHHHHHHHhCCCEEEEEcCCCCcHH-----------H-HHHHhCCCEEECCCCHHHcCCCCCC
Confidence 56887774 4444555667889999999987654322100 0 0011234444332222222102589
Q ss_pred EEEEcCCCCcccccCCHHHHHHHHHHHhCCCeEEE
Q 016237 88 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIAS 122 (392)
Q Consensus 88 ~iiipGG~~~~~~~~~~~l~~~l~~~~~~~~~i~a 122 (392)
.||+.-|... +++.+ +++.++|.+|.+
T Consensus 69 ~vV~Spgi~~----~~p~~----~~a~~~gi~v~~ 95 (326)
T 3eag_A 69 VYVIGNVAKR----GMDVV----EAILNLGLPYIS 95 (326)
T ss_dssp EEEECTTCCT----TCHHH----HHHHHTTCCEEE
T ss_pred EEEECCCcCC----CCHHH----HHHHHcCCcEEe
Confidence 9999665422 33433 445556666654
No 221
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=27.16 E-value=20 Score=29.94 Aligned_cols=44 Identities=18% Similarity=0.207 Sum_probs=21.8
Q ss_pred CCCccEEEEcCCC-CcccccCCHHHHHHHHHH---HhCCCeEEEEchh
Q 016237 83 PSKYDGLVIPGGR-APEYLAMNDSVIDLVRKF---SNSGKTIASICHG 126 (392)
Q Consensus 83 ~~~~D~iiipGG~-~~~~~~~~~~l~~~l~~~---~~~~~~i~aic~G 126 (392)
..++|+||+.--. ....-..-+.+++|+... .-++|+++.++++
T Consensus 71 i~~AD~iIi~tP~Y~~s~p~~lK~~iD~l~~~~~~~l~gK~v~~v~ts 118 (199)
T 3s2y_A 71 IATADAVVIVTPEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTAS 118 (199)
Confidence 3478999984421 101011113344444432 1257887777754
No 222
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=21.18 E-value=1.3e+02 Score=25.10 Aligned_cols=37 Identities=8% Similarity=-0.059 Sum_probs=30.3
Q ss_pred CCEEEEEecCCCCccchHHHHHHHHhCCCeEEEECCC
Q 016237 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPG 44 (392)
Q Consensus 8 ~~kI~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (392)
+|||.+-+.=+....-.....+.|.+.|++|+++-..
T Consensus 4 ~k~IllgvTGaiaa~k~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp CSEEEEEECSSSCHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3689998887777777888889999999999987654
No 223
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=20.92 E-value=1.6e+02 Score=24.29 Aligned_cols=79 Identities=11% Similarity=-0.017 Sum_probs=47.0
Q ss_pred CccEEEEeC-CCCCcchhHHHHHHHHhcCCeEEEEcCCCCCCCCCCCcccCCCCCccccCCCCCcccccccccCCCCCCc
Q 016237 201 DKRILFLCG-DYMEDYEVAVPFQSLQALECHVDAVCPKKKAGDSCPTAVHDFEGDQTYSEKPGHNFTLTANFESVDVSGY 279 (392)
Q Consensus 201 ~~~v~ill~-~~~~~~e~~~~~~~~~~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 279 (392)
..++.+... ....+.........|+..||+|..+..+ ++++.-.+.+...++
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~---------------------------vp~~~l~~~~~~~~~ 140 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD---------------------------IEPGKFVEAVKKYQP 140 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS---------------------------BCHHHHHHHHHHHCC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC---------------------------CCHHHHHHHHHHcCC
Confidence 335555444 3566777778889999999999888753 111221222222368
Q ss_pred CEEEEcCCCChhhccCChHHHHHHHHHHHcC
Q 016237 280 DALVVPGGRAPEYLALNENVIALVKDFMEAK 310 (392)
Q Consensus 280 D~viipgg~~~~~~~~~~~l~~~l~~~~~~g 310 (392)
|+|.+.+.... .-+.+.+.+++..+++
T Consensus 141 d~v~lS~~~~~----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 141 DIVGMSALLTT----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp SEEEEECCSGG----GTHHHHHHHHHHHHTT
T ss_pred CEEEEeccccc----cHHHHHHHHHHHHhcC
Confidence 99999774332 2345555665555554
No 224
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.71 E-value=1.5e+02 Score=26.20 Aligned_cols=37 Identities=8% Similarity=0.058 Sum_probs=23.5
Q ss_pred CCccEEEEeCCCCCc----chhHHHHHHHHhcCCeEEEEcC
Q 016237 200 SDKRILFLCGDYMED----YEVAVPFQSLQALECHVDAVCP 236 (392)
Q Consensus 200 ~~~~v~ill~~~~~~----~e~~~~~~~~~~~~~~v~~~s~ 236 (392)
.|+++.+++.+..-. .-.......|++.++++++...
T Consensus 7 ~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t 47 (304)
T 3s40_A 7 KFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHT 47 (304)
T ss_dssp SCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEEC
T ss_pred CCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEc
Confidence 467888877663322 1234566778888888877643
No 225
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=20.62 E-value=71 Score=24.84 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=24.3
Q ss_pred CCCCccEEEEcCCCCcccccCCHHHHHHHHHHHh-CCCeEEEEchh
Q 016237 82 DPSKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSN-SGKTIASICHG 126 (392)
Q Consensus 82 ~~~~~D~iiipGG~~~~~~~~~~~l~~~l~~~~~-~~~~i~aic~G 126 (392)
+..+||.|++... .-.-.-.+.+..||.+... ++++++..++|
T Consensus 73 ~l~~~d~iilG~P--~~~g~~~~~~~~fl~~~~~~~~k~~~~~t~g 116 (151)
T 3edo_A 73 DYNNYDLILIGSP--VWSGYPATPIKTLLDQMKNYRGEVASFFTSA 116 (151)
T ss_dssp CGGGCSEEEEEEE--EETTEECTHHHHHHHHTTTCCSEEEEEEECS
T ss_pred CHhhCCEEEEEcc--eecccccHHHHHHHHhchhcCCEEEEEEEeC
Confidence 3458999999432 1111224678888887643 34444444443
No 226
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=20.51 E-value=19 Score=31.20 Aligned_cols=37 Identities=5% Similarity=-0.026 Sum_probs=23.9
Q ss_pred CCCEEEEEecCCC--C---ccchHHHHHHHHhCCCeEEEECC
Q 016237 7 GKRSVLLLCGDYM--E---DYEAMVPFQALLAFGVSVDAACP 43 (392)
Q Consensus 7 ~~~kI~ill~~g~--~---~~e~~~~~~~l~~ag~~v~~~s~ 43 (392)
++++|++++.+-. + ..-+.+..+.+++.|+++.+...
T Consensus 4 ~~~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 45 (289)
T 3brs_A 4 KQYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLEFMAP 45 (289)
T ss_dssp -CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTCEEEECCC
T ss_pred CCcEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 4578999986432 2 12234556667778999988765
No 227
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=20.30 E-value=2.1e+02 Score=24.59 Aligned_cols=37 Identities=11% Similarity=0.035 Sum_probs=26.9
Q ss_pred CccEEEEeC-CCCCcchhHHHHHHHHhcCCeEEEEcCC
Q 016237 201 DKRILFLCG-DYMEDYEVAVPFQSLQALECHVDAVCPK 237 (392)
Q Consensus 201 ~~~v~ill~-~~~~~~e~~~~~~~~~~~~~~v~~~s~~ 237 (392)
..++.+... ....+........+|+..||+|..++.+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 445555544 3566677778888999999999988764
Done!