Query 016239
Match_columns 392
No_of_seqs 230 out of 2386
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 10:15:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016239.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016239hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 7.5E-41 2.6E-45 305.8 31.5 272 57-378 19-308 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 3.3E-40 1.1E-44 300.6 32.2 273 58-380 11-300 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 2E-40 6.7E-45 302.7 30.4 275 61-386 10-301 (306)
4 2vpj_A Kelch-like protein 12; 100.0 1.2E-39 4.2E-44 296.7 28.4 270 61-379 13-300 (301)
5 4asc_A Kelch repeat and BTB do 100.0 1.1E-37 3.7E-42 285.7 27.9 263 62-380 4-298 (315)
6 2woz_A Kelch repeat and BTB do 100.0 3.6E-37 1.2E-41 282.7 28.1 264 61-380 14-308 (318)
7 2uvk_A YJHT; unknown function, 100.0 2.9E-35 9.9E-40 274.3 26.0 268 57-368 14-353 (357)
8 2xn4_A Kelch-like protein 2; s 100.0 8.6E-36 2.9E-40 271.4 21.1 259 27-331 29-302 (302)
9 4asc_A Kelch repeat and BTB do 100.0 8.3E-36 2.9E-40 273.2 16.7 262 28-336 13-305 (315)
10 1zgk_A Kelch-like ECH-associat 100.0 3.5E-35 1.2E-39 268.2 20.7 246 26-306 37-300 (308)
11 3ii7_A Kelch-like protein 7; p 100.0 6.5E-35 2.2E-39 266.1 19.7 247 27-305 23-284 (306)
12 2vpj_A Kelch-like protein 12; 100.0 1.2E-34 3.9E-39 263.8 19.9 245 27-306 30-291 (301)
13 2woz_A Kelch repeat and BTB do 100.0 8.2E-35 2.8E-39 267.0 18.5 260 29-335 25-314 (318)
14 2uvk_A YJHT; unknown function, 100.0 1.2E-33 3.9E-38 263.5 25.8 247 92-377 2-314 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 3.3E-30 1.1E-34 259.3 21.9 238 61-337 396-674 (695)
16 1k3i_A Galactose oxidase precu 100.0 8.3E-31 2.8E-35 263.2 14.7 299 30-378 168-518 (656)
17 2zwa_A Leucine carboxyl methyl 99.9 8.1E-27 2.8E-31 234.7 22.1 232 90-367 379-644 (695)
18 1k3i_A Galactose oxidase precu 99.9 1.6E-27 5.4E-32 239.3 10.6 269 28-339 219-532 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.3E-07 4.3E-12 89.8 23.0 45 8-52 17-61 (445)
20 1p22_A F-BOX/WD-repeat protein 98.9 7.4E-08 2.5E-12 91.2 20.3 44 8-51 9-56 (435)
21 1fs1_A SKP2 F-BOX, cyclin A/CD 98.9 1E-09 3.4E-14 71.0 3.8 47 6-52 5-51 (53)
22 3v7d_B Cell division control p 98.8 7.1E-07 2.4E-11 85.0 23.4 43 8-50 13-56 (464)
23 2e31_A FBS1, F-box only protei 98.6 3.4E-08 1.2E-12 86.9 4.2 48 8-55 49-97 (297)
24 3dsm_A Uncharacterized protein 98.1 0.0015 5.1E-08 59.0 24.6 223 77-355 16-255 (328)
25 3mbr_X Glutamine cyclotransfer 97.8 0.0011 3.9E-08 56.7 16.2 157 165-364 30-189 (243)
26 3nol_A Glutamine cyclotransfer 97.6 0.004 1.4E-07 53.7 17.0 159 165-364 52-211 (262)
27 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.049 1.7E-06 49.7 24.7 228 58-363 49-304 (376)
28 3nol_A Glutamine cyclotransfer 97.5 0.0023 8E-08 55.2 14.2 189 104-338 47-246 (262)
29 3l2o_B F-box only protein 4; s 97.5 4.1E-05 1.4E-09 66.7 2.8 47 8-54 3-49 (312)
30 3dsm_A Uncharacterized protein 97.4 0.016 5.6E-07 52.0 19.4 152 165-355 53-214 (328)
31 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.028 9.4E-07 51.4 20.4 198 104-363 48-266 (376)
32 3mbr_X Glutamine cyclotransfer 97.3 0.017 5.7E-07 49.4 17.1 147 62-248 30-183 (243)
33 3nok_A Glutaminyl cyclase; bet 97.3 0.027 9.2E-07 48.7 17.9 189 104-338 59-256 (268)
34 1ri6_A Putative isomerase YBHE 97.2 0.018 6E-07 51.4 17.1 154 188-368 152-321 (343)
35 3nok_A Glutaminyl cyclase; bet 97.2 0.0073 2.5E-07 52.2 13.3 151 165-358 64-215 (268)
36 2ast_B S-phase kinase-associat 97.2 0.0002 6.7E-09 65.0 3.6 46 5-50 4-49 (336)
37 3hfq_A Uncharacterized protein 97.2 0.0085 2.9E-07 54.0 14.4 191 78-300 18-227 (347)
38 2iwa_A Glutamine cyclotransfer 97.0 0.072 2.4E-06 46.3 18.1 153 165-356 31-184 (266)
39 1rwi_B Serine/threonine-protei 97.0 0.089 3E-06 45.1 18.9 173 78-295 46-224 (270)
40 2z2n_A Virginiamycin B lyase; 97.0 0.098 3.4E-06 45.4 19.2 198 78-335 78-283 (299)
41 1k8k_C P40, ARP2/3 complex 41 97.0 0.12 4.2E-06 46.4 20.4 134 78-243 30-172 (372)
42 3vgz_A Uncharacterized protein 96.8 0.23 7.9E-06 44.2 21.1 195 61-297 51-266 (353)
43 1l0q_A Surface layer protein; 96.7 0.11 3.7E-06 47.4 18.3 181 64-296 3-192 (391)
44 2iwa_A Glutamine cyclotransfer 96.7 0.11 3.6E-06 45.1 16.8 145 63-247 32-184 (266)
45 1l0q_A Surface layer protein; 96.6 0.059 2E-06 49.1 15.7 144 61-249 42-194 (391)
46 3bws_A Protein LP49; two-domai 96.6 0.063 2.2E-06 49.7 15.8 180 79-295 102-294 (433)
47 3jrp_A Fusion protein of prote 96.6 0.094 3.2E-06 47.2 16.6 65 224-292 171-241 (379)
48 3scy_A Hypothetical bacterial 96.6 0.26 8.8E-06 44.4 19.6 115 224-355 221-341 (361)
49 1q7f_A NHL, brain tumor CG1071 96.5 0.16 5.6E-06 44.0 17.1 185 61-290 87-279 (286)
50 2z2n_A Virginiamycin B lyase; 96.5 0.36 1.2E-05 41.7 20.0 176 78-299 36-218 (299)
51 2vdu_B TRNA (guanine-N(7)-)-me 96.5 0.51 1.7E-05 44.0 21.2 157 166-355 210-395 (450)
52 2ovr_B FBW7, F-BOX/WD repeat p 96.4 0.58 2E-05 43.4 21.9 94 188-295 300-393 (445)
53 3g4e_A Regucalcin; six bladed 96.4 0.44 1.5E-05 41.7 21.2 221 62-336 24-261 (297)
54 2qc5_A Streptogramin B lactona 96.4 0.32 1.1E-05 42.1 18.4 187 61-299 29-223 (300)
55 1gxr_A ESG1, transducin-like e 96.4 0.36 1.2E-05 42.4 18.9 91 188-295 206-298 (337)
56 3jrp_A Fusion protein of prote 96.3 0.32 1.1E-05 43.6 18.5 116 166-302 69-202 (379)
57 3dwl_C Actin-related protein 2 96.3 0.096 3.3E-06 47.4 14.9 148 62-246 22-179 (377)
58 4aez_A CDC20, WD repeat-contai 96.3 0.23 7.7E-06 45.6 17.5 66 224-295 228-295 (401)
59 3v9f_A Two-component system se 96.3 0.23 8E-06 50.2 19.0 180 79-300 384-575 (781)
60 3hfq_A Uncharacterized protein 96.3 0.23 7.9E-06 44.4 17.2 146 188-355 163-321 (347)
61 3v9f_A Two-component system se 96.2 0.24 8.1E-06 50.2 18.6 181 79-300 428-618 (781)
62 3scy_A Hypothetical bacterial 96.2 0.66 2.3E-05 41.6 20.1 23 224-246 165-188 (361)
63 1q7f_A NHL, brain tumor CG1071 96.1 0.57 1.9E-05 40.4 20.4 187 62-295 40-240 (286)
64 2qc5_A Streptogramin B lactona 96.1 0.61 2.1E-05 40.2 20.7 174 78-298 83-264 (300)
65 2ojh_A Uncharacterized protein 96.1 0.58 2E-05 40.0 19.8 184 78-301 22-214 (297)
66 2p1m_B Transport inhibitor res 96.1 0.0027 9.4E-08 62.2 3.2 36 8-43 4-40 (594)
67 4ery_A WD repeat-containing pr 96.0 0.51 1.7E-05 41.3 17.8 105 165-294 118-224 (312)
68 4a2l_A BT_4663, two-component 96.0 0.29 1E-05 49.6 18.0 179 78-300 427-621 (795)
69 1ri6_A Putative isomerase YBHE 95.9 0.43 1.5E-05 42.1 17.1 75 226-304 244-321 (343)
70 2p4o_A Hypothetical protein; p 95.9 0.69 2.4E-05 40.7 18.2 215 62-336 42-277 (306)
71 1p22_A F-BOX/WD-repeat protein 95.9 0.6 2.1E-05 43.2 18.5 104 165-294 182-286 (435)
72 3v7d_B Cell division control p 95.9 0.85 2.9E-05 42.4 19.7 92 188-296 333-424 (464)
73 2dg1_A DRP35, lactonase; beta 95.9 0.84 2.9E-05 40.3 19.7 192 61-295 54-265 (333)
74 3no2_A Uncharacterized protein 95.9 0.53 1.8E-05 40.9 16.9 230 78-363 15-260 (276)
75 4a2l_A BT_4663, two-component 95.8 1.7 5.7E-05 44.0 22.5 186 79-301 194-394 (795)
76 1nir_A Nitrite reductase; hemo 95.6 0.85 2.9E-05 44.0 18.6 243 11-296 95-358 (543)
77 2pm7_B Protein transport prote 95.6 1 3.5E-05 39.2 21.9 69 225-297 170-244 (297)
78 3vl1_A 26S proteasome regulato 95.6 1.3 4.6E-05 40.3 21.7 64 224-293 258-322 (420)
79 1k8k_C P40, ARP2/3 complex 41 95.6 1.2 4.1E-05 39.7 23.2 74 224-303 213-286 (372)
80 1gxr_A ESG1, transducin-like e 95.6 0.87 3E-05 39.8 17.5 92 188-295 164-257 (337)
81 3jro_A Fusion protein of prote 95.5 0.66 2.2E-05 46.7 18.0 115 166-301 67-199 (753)
82 3ow8_A WD repeat-containing pr 95.4 1.2 4E-05 39.4 17.9 103 165-294 175-280 (321)
83 3bws_A Protein LP49; two-domai 95.3 0.12 4.1E-06 47.8 11.2 69 165-247 133-203 (433)
84 3jro_A Fusion protein of prote 95.3 0.23 7.9E-06 50.1 14.1 177 78-291 31-238 (753)
85 1ijq_A LDL receptor, low-densi 95.3 1.4 4.8E-05 39.0 22.2 198 78-336 10-226 (316)
86 2hqs_A Protein TOLB; TOLB, PAL 95.2 1.8 6.3E-05 39.8 21.8 101 187-301 247-352 (415)
87 4g56_B MGC81050 protein; prote 95.2 1.6 5.6E-05 39.2 19.7 94 188-295 205-303 (357)
88 3m0c_C LDL receptor, low-densi 95.2 3 0.0001 42.1 22.4 132 165-336 482-620 (791)
89 4gqb_B Methylosome protein 50; 95.1 0.41 1.4E-05 43.1 13.9 106 165-295 181-291 (344)
90 3ow8_A WD repeat-containing pr 95.1 1.2 4.2E-05 39.3 16.9 65 224-295 175-239 (321)
91 1rwi_B Serine/threonine-protei 95.1 1.3 4.3E-05 37.6 16.6 158 78-275 87-252 (270)
92 4gga_A P55CDC, cell division c 95.0 1.3 4.4E-05 40.7 17.2 102 165-289 158-259 (420)
93 3bg1_A Protein SEC13 homolog; 94.9 1.1 3.6E-05 39.5 15.8 62 225-290 179-246 (316)
94 3v65_B Low-density lipoprotein 94.8 2.3 8E-05 38.8 24.7 196 78-336 96-306 (386)
95 4ery_A WD repeat-containing pr 94.8 1.8 6.3E-05 37.6 18.3 106 165-294 160-269 (312)
96 3u4y_A Uncharacterized protein 94.8 0.83 2.8E-05 40.2 14.7 141 62-244 9-160 (331)
97 2hqs_A Protein TOLB; TOLB, PAL 94.7 2.5 8.7E-05 38.9 19.6 180 78-301 203-395 (415)
98 3fm0_A Protein CIAO1; WDR39,SG 94.7 0.58 2E-05 41.9 13.7 114 165-301 72-189 (345)
99 4aez_A CDC20, WD repeat-contai 94.7 1.4 4.6E-05 40.3 16.4 103 165-293 145-248 (401)
100 3mkq_A Coatomer beta'-subunit; 94.6 0.94 3.2E-05 45.6 16.5 65 224-294 152-218 (814)
101 3g4e_A Regucalcin; six bladed 94.6 0.84 2.9E-05 39.9 14.2 107 165-293 24-139 (297)
102 3ogk_B Coronatine-insensitive 94.6 0.013 4.5E-07 57.2 2.4 34 11-44 14-48 (592)
103 2ojh_A Uncharacterized protein 94.5 1.3 4.5E-05 37.6 15.2 102 188-301 63-170 (297)
104 3fm0_A Protein CIAO1; WDR39,SG 94.5 1.2 4.2E-05 39.7 15.3 62 224-289 161-223 (345)
105 2hes_X YDR267CP; beta-propelle 94.4 2.5 8.5E-05 37.4 18.5 76 224-303 164-246 (330)
106 4gga_A P55CDC, cell division c 94.4 2.3 7.8E-05 39.0 17.3 131 78-246 125-263 (420)
107 1r5m_A SIR4-interacting protei 94.3 2.7 9.2E-05 38.0 17.4 60 224-289 300-359 (425)
108 3bg1_A Protein SEC13 homolog; 94.2 1.1 3.8E-05 39.4 14.2 75 226-305 229-306 (316)
109 2aq5_A Coronin-1A; WD40 repeat 94.1 3.3 0.00011 37.6 17.9 97 188-293 155-254 (402)
110 3azo_A Aminopeptidase; POP fam 94.1 4.7 0.00016 39.4 19.9 140 187-355 217-371 (662)
111 2dg1_A DRP35, lactonase; beta 94.1 0.54 1.8E-05 41.6 12.0 117 165-299 55-177 (333)
112 2pm7_B Protein transport prote 94.1 2.6 9.1E-05 36.5 18.7 63 166-245 67-133 (297)
113 3v64_C Agrin; beta propeller, 93.9 3.5 0.00012 37.0 25.4 196 78-336 53-263 (349)
114 1jmx_B Amine dehydrogenase; ox 93.8 3 0.0001 36.5 16.4 64 60-129 8-77 (349)
115 3no2_A Uncharacterized protein 93.8 2.8 9.7E-05 36.2 15.7 139 188-363 57-203 (276)
116 1got_B GT-beta; complex (GTP-b 93.7 3.4 0.00012 36.5 17.6 91 188-294 165-258 (340)
117 1pjx_A Dfpase, DIISOPROPYLFLUO 93.7 3.2 0.00011 35.9 16.2 185 78-295 46-258 (314)
118 4e54_B DNA damage-binding prot 93.6 4.3 0.00015 37.4 17.8 100 165-288 220-324 (435)
119 2z3z_A Dipeptidyl aminopeptida 93.6 6 0.00021 39.0 21.9 105 186-300 234-351 (706)
120 1n7d_A LDL receptor, low-densi 93.5 0.86 3E-05 45.5 13.2 132 165-336 464-602 (699)
121 3p5b_L Low density lipoprotein 93.5 4.5 0.00015 37.1 22.8 132 165-336 170-308 (400)
122 3ott_A Two-component system se 93.5 3.7 0.00013 41.2 18.0 141 78-251 82-227 (758)
123 3ei3_B DNA damage-binding prot 93.4 4.2 0.00014 36.4 18.5 169 78-288 96-279 (383)
124 2ynn_A Coatomer subunit beta'; 93.4 3.7 0.00013 35.7 15.9 64 224-295 197-261 (304)
125 1pby_B Quinohemoprotein amine 93.3 1.2 4E-05 39.1 12.6 25 62-91 45-69 (337)
126 1vyh_C Platelet-activating fac 93.2 4.9 0.00017 36.7 17.2 53 188-248 215-269 (410)
127 3c5m_A Oligogalacturonate lyas 93.2 4.1 0.00014 36.5 16.4 101 187-299 264-390 (396)
128 4e54_B DNA damage-binding prot 93.1 0.63 2.2E-05 43.2 11.0 107 165-293 131-240 (435)
129 1qhu_A Protein (hemopexin); be 93.0 6 0.0002 37.0 19.4 103 223-337 268-376 (460)
130 3vl1_A 26S proteasome regulato 92.8 4.8 0.00016 36.5 16.5 24 224-247 192-215 (420)
131 1kb0_A Quinohemoprotein alcoho 92.8 4.6 0.00016 40.0 17.2 111 105-250 73-207 (677)
132 3dwl_C Actin-related protein 2 92.6 0.82 2.8E-05 41.1 10.7 135 118-289 35-175 (377)
133 1r5m_A SIR4-interacting protei 92.6 5.7 0.00019 35.7 18.5 62 224-294 258-320 (425)
134 3fvz_A Peptidyl-glycine alpha- 92.4 5.5 0.00019 35.1 27.8 189 79-297 70-281 (329)
135 4ggc_A P55CDC, cell division c 92.3 4.9 0.00017 34.6 17.4 23 224-246 161-183 (318)
136 2pbi_B Guanine nucleotide-bind 92.3 5.8 0.0002 35.4 17.3 64 224-294 209-272 (354)
137 3e5z_A Putative gluconolactona 92.3 5 0.00017 34.5 19.4 184 78-298 50-251 (296)
138 3zwl_B Eukaryotic translation 92.3 5.5 0.00019 35.0 16.7 65 224-295 186-251 (369)
139 2ad6_A Methanol dehydrogenase 92.3 1.8 6.2E-05 42.0 13.2 126 218-363 56-193 (571)
140 4aow_A Guanine nucleotide-bind 92.2 5.4 0.00019 34.7 17.6 51 188-246 196-248 (340)
141 1qhu_A Protein (hemopexin); be 92.1 7.7 0.00026 36.3 21.7 53 62-124 158-214 (460)
142 2bkl_A Prolyl endopeptidase; m 92.1 10 0.00034 37.5 22.3 97 186-295 251-353 (695)
143 4gqb_B Methylosome protein 50; 92.1 2.6 8.8E-05 37.7 13.3 105 165-294 138-247 (344)
144 1npe_A Nidogen, entactin; glyc 92.0 5 0.00017 34.0 21.2 145 165-355 90-240 (267)
145 2ynn_A Coatomer subunit beta'; 92.0 5.7 0.00019 34.4 17.8 64 224-294 152-218 (304)
146 2hes_X YDR267CP; beta-propelle 92.0 2.3 7.9E-05 37.6 12.8 62 224-289 260-326 (330)
147 3ei3_B DNA damage-binding prot 91.8 5.2 0.00018 35.8 15.2 105 167-293 87-194 (383)
148 2fp8_A Strictosidine synthase; 91.6 4.1 0.00014 35.8 13.9 51 224-274 239-300 (322)
149 3vgz_A Uncharacterized protein 91.5 6.7 0.00023 34.4 21.6 136 78-249 164-308 (353)
150 3e5z_A Putative gluconolactona 91.5 6.2 0.00021 33.9 17.1 60 224-295 228-288 (296)
151 2fp8_A Strictosidine synthase; 91.4 6.8 0.00023 34.3 20.2 127 187-336 165-301 (322)
152 4g56_B MGC81050 protein; prote 91.4 3 0.0001 37.4 13.0 101 165-291 238-343 (357)
153 3mmy_A MRNA export factor; mRN 91.0 7.2 0.00024 34.2 15.1 103 166-294 54-161 (368)
154 3i2n_A WD repeat-containing pr 91.0 7.6 0.00026 33.9 16.7 103 165-290 179-290 (357)
155 3k26_A Polycomb protein EED; W 91.0 7.7 0.00026 34.0 17.5 22 224-245 240-261 (366)
156 1got_B GT-beta; complex (GTP-b 90.9 8 0.00027 34.1 15.3 100 165-287 237-339 (340)
157 4a0p_A LRP6, LRP-6, low-densit 90.9 13 0.00044 36.4 25.4 198 78-336 15-225 (628)
158 1yfq_A Cell cycle arrest prote 90.6 8.1 0.00028 33.6 18.7 66 221-292 156-226 (342)
159 2xbg_A YCF48-like protein; pho 90.5 8.7 0.0003 33.9 16.7 91 196-301 108-201 (327)
160 3mkq_A Coatomer beta'-subunit; 90.5 4.9 0.00017 40.3 14.9 63 224-293 197-259 (814)
161 3lrv_A PRE-mRNA-splicing facto 90.4 8.9 0.0003 33.8 21.0 111 165-298 181-299 (343)
162 1kv9_A Type II quinohemoprotei 90.3 2.2 7.5E-05 42.3 11.7 125 218-363 60-195 (668)
163 3ott_A Two-component system se 90.2 9.3 0.00032 38.2 16.5 127 109-274 482-615 (758)
164 1w6s_A Methanol dehydrogenase 90.2 10 0.00035 36.9 16.1 111 105-250 58-199 (599)
165 3sov_A LRP-6, low-density lipo 90.1 9.5 0.00033 33.6 19.6 130 165-336 90-226 (318)
166 2pm9_A Protein WEB1, protein t 90.1 10 0.00035 34.0 18.4 109 166-294 178-295 (416)
167 1vyh_C Platelet-activating fac 90.0 11 0.00038 34.3 17.5 62 225-293 308-369 (410)
168 1erj_A Transcriptional repress 89.9 11 0.00037 34.1 19.1 68 165-245 218-288 (393)
169 2pbi_B Guanine nucleotide-bind 89.9 6.5 0.00022 35.0 13.8 67 224-296 165-232 (354)
170 3b7f_A Glycosyl hydrolase, BNR 89.6 12 0.0004 34.0 21.2 203 62-304 22-274 (394)
171 1n7d_A LDL receptor, low-densi 89.6 6.2 0.00021 39.2 14.4 65 224-294 551-615 (699)
172 1kb0_A Quinohemoprotein alcoho 89.5 2.2 7.5E-05 42.3 11.0 125 218-363 71-207 (677)
173 3c7x_A Matrix metalloproteinas 89.5 6.9 0.00024 31.9 12.3 76 224-311 109-191 (196)
174 1erj_A Transcriptional repress 89.4 5.3 0.00018 36.2 12.9 90 188-289 188-285 (393)
175 2aq5_A Coronin-1A; WD40 repeat 89.3 12 0.00041 33.7 16.9 54 188-246 199-256 (402)
176 4h5i_A Guanine nucleotide-exch 89.3 12 0.0004 33.5 18.3 61 224-289 280-341 (365)
177 1jmx_B Amine dehydrogenase; ox 89.2 4.1 0.00014 35.7 11.8 67 165-248 10-78 (349)
178 1yiq_A Quinohemoprotein alcoho 89.0 2.7 9.3E-05 41.8 11.3 126 218-363 64-200 (689)
179 2ad6_A Methanol dehydrogenase 89.0 5 0.00017 38.8 12.9 111 105-250 58-193 (571)
180 2hz6_A Endoplasmic reticulum t 88.9 1.3 4.6E-05 40.1 8.4 50 188-249 103-156 (369)
181 3iz6_a 40S ribosomal protein R 88.9 13 0.00043 33.4 18.5 96 188-295 181-282 (380)
182 3hxj_A Pyrrolo-quinoline quino 88.8 8.6 0.00029 33.4 13.6 63 224-297 225-289 (330)
183 2xbg_A YCF48-like protein; pho 88.8 12 0.00041 33.0 18.1 171 87-301 108-287 (327)
184 1pgu_A Actin interacting prote 88.8 13 0.00045 35.4 16.0 91 188-289 468-570 (615)
185 4a11_B DNA excision repair pro 88.7 9.4 0.00032 34.0 14.2 87 188-289 123-216 (408)
186 1w6s_A Methanol dehydrogenase 88.4 4.3 0.00015 39.6 12.0 126 218-363 56-199 (599)
187 1ijq_A LDL receptor, low-densi 88.3 12 0.00043 32.7 20.5 107 165-294 131-239 (316)
188 2hz6_A Endoplasmic reticulum t 88.2 0.67 2.3E-05 42.2 5.8 63 165-249 9-75 (369)
189 4ggc_A P55CDC, cell division c 88.0 12 0.00041 32.0 14.6 100 165-287 78-177 (318)
190 2ecf_A Dipeptidyl peptidase IV 87.8 23 0.00077 35.0 19.2 103 188-300 264-375 (741)
191 4aow_A Guanine nucleotide-bind 87.7 13 0.00044 32.1 15.2 102 165-289 226-335 (340)
192 3odt_A Protein DOA1; ubiquitin 87.7 12 0.00042 31.8 18.7 62 224-294 154-215 (313)
193 1flg_A Protein (quinoprotein e 87.5 5.8 0.0002 38.5 12.3 74 218-299 62-144 (582)
194 1sq9_A Antiviral protein SKI8; 87.4 15 0.00052 32.6 19.6 23 224-246 244-269 (397)
195 3m0c_C LDL receptor, low-densi 87.3 26 0.0009 35.3 21.5 104 165-291 525-630 (791)
196 1nir_A Nitrite reductase; hemo 87.0 8.4 0.00029 36.9 13.1 52 188-247 201-260 (543)
197 2xyi_A Probable histone-bindin 86.9 18 0.00062 33.0 15.5 60 226-290 291-352 (430)
198 3odt_A Protein DOA1; ubiquitin 86.7 14 0.00047 31.4 17.4 63 219-287 108-170 (313)
199 1yiq_A Quinohemoprotein alcoho 86.6 9.4 0.00032 37.9 13.5 111 105-250 66-200 (689)
200 3oyo_A Hemopexin fold protein 86.5 13 0.00043 31.1 12.3 76 224-310 127-216 (225)
201 3u4y_A Uncharacterized protein 86.5 15 0.00052 31.7 16.2 63 165-247 9-74 (331)
202 1qks_A Cytochrome CD1 nitrite 86.2 13 0.00043 35.9 13.8 53 188-246 219-277 (567)
203 3sfz_A APAF-1, apoptotic pepti 86.1 9.8 0.00034 40.3 14.3 92 188-293 1066-1158(1249)
204 1su3_A Interstitial collagenas 86.1 22 0.00074 33.1 14.9 63 224-296 367-435 (450)
205 3azo_A Aminopeptidase; POP fam 86.0 26 0.00089 34.0 18.4 122 165-301 252-377 (662)
206 3i2n_A WD repeat-containing pr 85.9 17 0.00057 31.6 15.8 66 224-295 128-201 (357)
207 1qks_A Cytochrome CD1 nitrite 85.9 22 0.00074 34.3 15.3 56 62-124 166-226 (567)
208 3tc9_A Hypothetical hydrolase; 85.7 16 0.00056 33.7 14.0 131 109-274 149-288 (430)
209 2ghs_A AGR_C_1268P; regucalcin 85.7 17 0.0006 31.8 13.7 104 165-290 60-167 (326)
210 2xdw_A Prolyl endopeptidase; a 85.7 29 0.001 34.2 21.1 97 186-294 258-369 (710)
211 3s94_A LRP-6, low-density lipo 85.6 28 0.00095 33.9 19.3 130 165-336 95-231 (619)
212 2p4o_A Hypothetical protein; p 85.6 17 0.00058 31.5 18.9 66 165-245 82-148 (306)
213 3iz6_a 40S ribosomal protein R 85.6 20 0.00067 32.1 15.1 62 225-292 170-236 (380)
214 2xyi_A Probable histone-bindin 85.4 10 0.00035 34.8 12.4 62 224-289 243-307 (430)
215 1pgu_A Actin interacting prote 85.4 26 0.00088 33.3 21.9 63 227-295 175-240 (615)
216 1sq9_A Antiviral protein SKI8; 85.4 20 0.00067 31.9 17.8 67 224-294 197-268 (397)
217 3hrp_A Uncharacterized protein 85.3 22 0.00075 32.5 15.7 64 224-294 230-299 (409)
218 3dr2_A Exported gluconolactona 85.2 13 0.00044 32.1 12.5 76 224-300 96-185 (305)
219 4a11_B DNA excision repair pro 85.1 20 0.00068 31.8 18.7 60 225-290 304-364 (408)
220 2vdu_B TRNA (guanine-N(7)-)-me 85.1 23 0.00078 32.5 19.2 72 225-297 319-397 (450)
221 3hrp_A Uncharacterized protein 84.9 23 0.00079 32.3 20.7 149 61-245 140-299 (409)
222 1kv9_A Type II quinohemoprotei 84.8 14 0.00047 36.5 13.7 118 165-298 66-194 (668)
223 3sfz_A APAF-1, apoptotic pepti 84.7 39 0.0013 35.7 18.1 68 224-298 972-1039(1249)
224 2pm9_A Protein WEB1, protein t 84.7 22 0.00074 31.8 20.3 25 225-249 178-202 (416)
225 2ecf_A Dipeptidyl peptidase IV 84.4 20 0.00069 35.4 14.9 62 236-299 264-327 (741)
226 3f3f_A Nucleoporin SEH1; struc 83.8 20 0.00068 30.7 21.3 62 225-290 182-248 (351)
227 1hxn_A Hemopexin, HPX; heme, b 83.4 18 0.0006 30.0 11.6 59 224-294 126-198 (219)
228 3dr2_A Exported gluconolactona 83.4 20 0.00068 30.9 12.9 27 224-252 249-275 (305)
229 3dm0_A Maltose-binding peripla 82.9 34 0.0011 33.6 15.7 51 188-246 542-594 (694)
230 3zwl_B Eukaryotic translation 82.6 24 0.00081 30.7 15.2 49 188-245 97-152 (369)
231 1itv_A MMP9; adaptive molecula 82.6 18 0.00061 29.3 16.1 62 224-295 109-176 (195)
232 3v65_B Low-density lipoprotein 82.2 29 0.00098 31.4 14.3 94 188-295 97-192 (386)
233 3gre_A Serine/threonine-protei 81.7 21 0.00071 32.4 12.9 66 165-247 181-248 (437)
234 1pex_A Collagenase-3, MMP-13; 81.5 21 0.0007 29.3 18.7 109 224-355 79-194 (207)
235 1npe_A Nidogen, entactin; glyc 81.5 23 0.00078 29.8 21.8 186 62-295 47-240 (267)
236 2bkl_A Prolyl endopeptidase; m 81.3 43 0.0015 32.8 19.6 122 165-301 131-269 (695)
237 3o4h_A Acylamino-acid-releasin 81.2 38 0.0013 32.2 20.7 89 187-289 175-274 (582)
238 3hxj_A Pyrrolo-quinoline quino 81.0 14 0.00049 31.9 11.1 85 165-274 107-194 (330)
239 3p5b_L Low density lipoprotein 80.7 33 0.0011 31.2 20.8 104 165-293 213-320 (400)
240 1yr2_A Prolyl oligopeptidase; 80.3 45 0.0015 33.1 15.6 100 186-298 293-400 (741)
241 1pex_A Collagenase-3, MMP-13; 80.3 23 0.00078 29.0 17.7 62 224-295 127-194 (207)
242 3mmy_A MRNA export factor; mRN 80.0 29 0.001 30.1 17.0 96 188-300 109-208 (368)
243 3oyo_A Hemopexin fold protein 79.9 25 0.00085 29.2 11.8 110 223-352 69-197 (225)
244 3c7x_A Matrix metalloproteinas 79.8 23 0.00078 28.7 13.3 110 223-355 60-177 (196)
245 3ba0_A Macrophage metalloelast 79.5 35 0.0012 30.7 16.0 110 224-355 236-352 (365)
246 3lp9_A LS-24; SEED albumin, pl 79.3 14 0.00048 30.8 9.7 65 165-245 129-202 (227)
247 3fvz_A Peptidyl-glycine alpha- 79.3 31 0.0011 30.0 22.0 95 165-275 207-310 (329)
248 2z3z_A Dipeptidyl aminopeptida 79.2 50 0.0017 32.3 23.0 108 186-300 283-398 (706)
249 1itv_A MMP9; adaptive molecula 78.1 26 0.00088 28.4 18.0 109 224-355 64-176 (195)
250 2cn3_A Xyloglucanase, beta-1,4 78.0 58 0.002 32.4 15.5 91 196-303 555-649 (737)
251 1pjx_A Dfpase, DIISOPROPYLFLUO 78.0 32 0.0011 29.3 13.4 102 188-297 47-165 (314)
252 1yfq_A Cell cycle arrest prote 77.3 34 0.0012 29.4 13.3 62 224-292 67-130 (342)
253 3k26_A Polycomb protein EED; W 77.2 31 0.0011 29.9 12.2 63 225-295 85-149 (366)
254 3f3f_A Nucleoporin SEH1; struc 76.7 35 0.0012 29.1 18.7 20 226-245 231-250 (351)
255 3dm0_A Maltose-binding peripla 76.5 59 0.002 31.7 18.7 62 226-294 532-593 (694)
256 4hw6_A Hypothetical protein, I 76.0 46 0.0016 30.6 13.3 62 224-291 239-302 (433)
257 3lp9_A LS-24; SEED albumin, pl 76.0 10 0.00036 31.6 8.0 61 224-294 129-202 (227)
258 3gre_A Serine/threonine-protei 74.8 48 0.0016 29.9 15.0 23 224-246 272-294 (437)
259 3sov_A LRP-6, low-density lipo 74.4 44 0.0015 29.2 16.2 103 165-294 46-155 (318)
260 3iuj_A Prolyl endopeptidase; h 74.0 70 0.0024 31.4 21.1 99 187-299 259-365 (693)
261 3pe7_A Oligogalacturonate lyas 74.0 46 0.0016 29.3 14.6 107 188-300 61-184 (388)
262 3b7f_A Glycosyl hydrolase, BNR 73.9 50 0.0017 29.6 15.1 106 188-301 82-216 (394)
263 3lrv_A PRE-mRNA-splicing facto 73.0 47 0.0016 28.9 22.6 92 188-294 150-245 (343)
264 3ba0_A Macrophage metalloelast 72.1 56 0.0019 29.4 16.8 64 224-297 284-354 (365)
265 1gen_A Gelatinase A; hydrolase 71.6 41 0.0014 27.7 15.3 62 224-295 135-204 (218)
266 2ece_A 462AA long hypothetical 71.1 67 0.0023 29.9 15.8 234 60-354 93-428 (462)
267 3ei3_A DNA damage-binding prot 70.7 62 0.0021 34.2 14.0 157 166-352 844-1000(1158)
268 2p9w_A MAL S 1 allergenic prot 70.7 57 0.0019 28.9 21.5 138 165-336 147-303 (334)
269 3v64_C Agrin; beta propeller, 69.6 60 0.002 28.7 21.3 102 165-291 170-273 (349)
270 1nr0_A Actin interacting prote 69.5 81 0.0028 30.2 18.8 106 165-294 250-356 (611)
271 1pby_B Quinohemoprotein amine 68.9 25 0.00084 30.2 9.3 56 188-248 12-69 (337)
272 3o4h_A Acylamino-acid-releasin 68.8 75 0.0026 30.1 13.5 96 189-299 134-233 (582)
273 3c75_H MADH, methylamine dehyd 67.4 77 0.0026 29.1 16.0 64 60-128 82-160 (426)
274 3iuj_A Prolyl endopeptidase; h 66.8 1E+02 0.0034 30.2 14.9 152 185-363 153-323 (693)
275 3sjl_D Methylamine dehydrogena 66.3 77 0.0026 28.7 18.0 65 59-128 41-120 (386)
276 1gen_A Gelatinase A; hydrolase 65.9 55 0.0019 26.9 16.0 98 224-337 87-193 (218)
277 3sjl_D Methylamine dehydrogena 65.6 53 0.0018 29.8 10.8 77 224-303 237-328 (386)
278 1hxn_A Hemopexin, HPX; heme, b 65.4 57 0.0019 26.9 14.4 65 219-293 67-144 (219)
279 3frx_A Guanine nucleotide-bind 65.1 67 0.0023 27.6 14.7 63 225-294 166-228 (319)
280 2ghs_A AGR_C_1268P; regucalcin 65.0 36 0.0012 29.6 9.6 67 224-301 60-126 (326)
281 2kwv_A RAD30 homolog B, DNA po 63.6 3.1 0.00011 24.5 1.4 18 8-25 19-36 (48)
282 1ck7_A Protein (gelatinase A); 63.6 52 0.0018 32.0 10.8 62 224-295 548-617 (631)
283 3sre_A PON1, serum paraoxonase 63.4 70 0.0024 28.6 11.1 91 234-336 82-183 (355)
284 2mad_H Methylamine dehydrogena 63.4 83 0.0028 28.1 23.8 61 60-124 30-105 (373)
285 2xdw_A Prolyl endopeptidase; a 61.1 1.3E+02 0.0043 29.5 16.7 110 236-363 209-329 (710)
286 3frx_A Guanine nucleotide-bind 60.7 80 0.0027 27.1 16.0 61 224-291 207-267 (319)
287 1flg_A Protein (quinoprotein e 60.3 36 0.0012 32.8 9.2 78 187-275 466-547 (582)
288 1su3_A Interstitial collagenas 58.9 1.1E+02 0.0039 28.2 18.4 109 224-355 318-434 (450)
289 3kya_A Putative phosphatase; s 58.5 1.2E+02 0.0042 28.5 12.2 112 109-243 151-277 (496)
290 3c5m_A Oligogalacturonate lyas 58.1 96 0.0033 27.1 21.4 108 186-303 167-283 (396)
291 3dw8_B Serine/threonine-protei 57.1 1.1E+02 0.0037 27.4 12.6 20 224-244 296-315 (447)
292 3tc9_A Hypothetical hydrolase; 56.5 22 0.00075 32.8 6.7 130 78-243 159-300 (430)
293 3a0f_A Xyloglucanase; beta-pro 56.2 1.6E+02 0.0056 29.2 20.7 73 224-299 256-351 (763)
294 3pe7_A Oligogalacturonate lyas 55.4 1.1E+02 0.0036 26.8 19.7 107 187-303 168-283 (388)
295 2xzm_R RACK1; ribosome, transl 55.4 1E+02 0.0035 26.6 15.8 61 165-245 87-150 (343)
296 2xzm_R RACK1; ribosome, transl 54.6 1.1E+02 0.0036 26.5 19.8 21 224-244 224-244 (343)
297 4h5i_A Guanine nucleotide-exch 53.9 1.2E+02 0.004 26.8 13.7 98 188-296 158-257 (365)
298 3s94_A LRP-6, low-density lipo 53.7 1.6E+02 0.0056 28.4 22.5 130 165-336 403-539 (619)
299 2gop_A Trilobed protease; beta 52.1 1.1E+02 0.0039 26.1 16.6 84 186-290 199-290 (347)
300 2oiz_A Aromatic amine dehydrog 49.7 1.4E+02 0.0046 26.4 17.2 60 62-124 15-89 (361)
301 1k32_A Tricorn protease; prote 46.1 1.2E+02 0.0039 31.5 10.9 102 188-299 359-467 (1045)
302 1yr2_A Prolyl oligopeptidase; 45.6 2.3E+02 0.0079 27.8 14.1 139 77-252 293-449 (741)
303 2xe4_A Oligopeptidase B; hydro 45.3 2.4E+02 0.0081 27.9 18.7 94 186-291 294-398 (751)
304 2be1_A Serine/threonine-protei 45.1 67 0.0023 28.5 7.7 74 224-304 10-87 (339)
305 3vu4_A KMHSV2; beta-propeller 43.7 1.6E+02 0.0056 25.6 22.9 62 224-289 206-269 (355)
306 1ck7_A Protein (gelatinase A); 42.7 1.1E+02 0.0039 29.7 9.3 98 224-337 500-606 (631)
307 2ymu_A WD-40 repeat protein; u 41.8 2.2E+02 0.0075 26.5 20.7 62 224-293 437-498 (577)
308 2be1_A Serine/threonine-protei 40.9 35 0.0012 30.4 5.1 26 224-249 55-81 (339)
309 2l9b_B MRNA 3'-END-processing 40.4 16 0.00054 22.2 1.8 21 12-33 6-26 (53)
310 3vu4_A KMHSV2; beta-propeller 39.9 1.9E+02 0.0064 25.2 19.0 22 225-246 148-170 (355)
311 4a0p_A LRP6, LRP-6, low-densit 39.5 2.7E+02 0.0093 26.9 21.0 155 78-274 59-224 (628)
312 2gop_A Trilobed protease; beta 38.7 1.6E+02 0.0055 25.1 9.4 59 235-300 152-214 (347)
313 1nr0_A Actin interacting prote 38.6 2.6E+02 0.009 26.5 20.1 61 227-295 162-223 (611)
314 1fwx_A Nitrous oxide reductase 38.3 52 0.0018 31.8 6.2 170 188-383 255-457 (595)
315 3amr_A 3-phytase; beta-propell 38.0 2.2E+02 0.0075 25.4 13.7 141 109-292 40-209 (355)
316 2oit_A Nucleoporin 214KDA; NH2 37.4 1.7E+02 0.0057 26.7 9.5 132 161-335 100-257 (434)
317 1sqj_A OXG-RCBH, oligoxylogluc 36.7 3.3E+02 0.011 27.1 21.2 132 225-368 134-280 (789)
318 3c75_H MADH, methylamine dehyd 36.2 1.8E+02 0.006 26.7 9.3 69 225-296 85-161 (426)
319 3b23_C Variegin; hydrolase-hyd 35.5 13 0.00046 19.8 0.9 19 1-19 11-29 (32)
320 2cn3_A Xyloglucanase, beta-1,4 30.0 4.1E+02 0.014 26.2 24.6 241 87-368 10-294 (737)
321 1sqj_A OXG-RCBH, oligoxylogluc 28.7 4.5E+02 0.015 26.2 24.0 77 224-300 241-340 (789)
322 2qe8_A Uncharacterized protein 28.6 2.8E+02 0.0094 23.9 9.2 78 165-250 77-161 (343)
323 3ju4_A Endo-N-acetylneuraminid 27.7 3.6E+02 0.012 24.7 10.7 109 217-337 286-406 (670)
324 1fwx_A Nitrous oxide reductase 27.2 85 0.0029 30.3 5.6 22 223-244 340-361 (595)
325 4gq1_A NUP37; propeller, trans 27.0 1.6E+02 0.0056 26.0 7.5 23 224-246 155-177 (393)
326 3qqz_A Putative uncharacterize 26.8 1.6E+02 0.0053 24.8 6.7 62 224-292 184-252 (255)
327 4hvt_A Ritya.17583.B, post-pro 26.0 4.8E+02 0.017 25.7 13.5 98 187-298 269-386 (711)
328 3ju4_A Endo-N-acetylneuraminid 25.2 3.2E+02 0.011 25.0 8.4 56 220-275 344-405 (670)
329 2qe8_A Uncharacterized protein 24.9 86 0.0029 27.3 5.0 51 224-275 258-309 (343)
330 2p9w_A MAL S 1 allergenic prot 23.9 2.1E+02 0.0073 25.2 7.2 64 224-293 147-215 (334)
331 2oaj_A Protein SNI1; WD40 repe 22.7 6.1E+02 0.021 25.6 17.3 24 224-247 109-132 (902)
332 2ymu_A WD-40 repeat protein; u 22.5 4.6E+02 0.016 24.1 21.5 63 224-294 396-458 (577)
333 1jof_A Carboxy-CIS,CIS-muconat 20.8 4.1E+02 0.014 22.9 16.2 182 161-378 152-364 (365)
334 2j04_A TAU60, YPL007P, hypothe 20.2 5.8E+02 0.02 24.5 11.0 69 165-246 140-213 (588)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.5e-41 Score=305.82 Aligned_cols=272 Identities=18% Similarity=0.289 Sum_probs=231.1
Q ss_pred cCCCCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEeecceEEeecCc-------------ceEec
Q 016239 57 TNASPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGANGFFFTTTPR-------------FGFSR 123 (392)
Q Consensus 57 ~~~~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g~i~v~gg~-------------~~ynp 123 (392)
+++..++.||++||. ....++++++||+.+++|..++++|.+|..++++..++.||++||. ++||+
T Consensus 19 ~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 19 HAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp --CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred cccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECC
Confidence 556778899999998 3456788999999999999999999999999999999999999983 79999
Q ss_pred CCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC
Q 016239 124 ILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP 203 (392)
Q Consensus 124 ~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 203 (392)
. +++|+.++++|.+|..++++++ +++||++||... .....++++||+.+++|+.++
T Consensus 98 ~-~~~W~~~~~~p~~r~~~~~~~~-----------------~~~iyv~GG~~~------~~~~~~~~~yd~~~~~W~~~~ 153 (308)
T 1zgk_A 98 M-TNQWSPCAPMSVPRNRIGVGVI-----------------DGHIYAVGGSHG------CIHHNSVERYEPERDEWHLVA 153 (308)
T ss_dssp T-TTEEEECCCCSSCCBTCEEEEE-----------------TTEEEEECCEET------TEECCCEEEEETTTTEEEECC
T ss_pred C-CCeEeECCCCCcCccccEEEEE-----------------CCEEEEEcCCCC------CcccccEEEECCCCCeEeECC
Confidence 9 7999999999999999999999 999999999742 223568999999999999999
Q ss_pred CCCCCCCCCCCccceeeEEECCEEEEEeecc-----cEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecC
Q 016239 204 PLPADFRSGYSSQYLSSALFRGRFYVFGIYS-----FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNA 278 (392)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~-----~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~ 278 (392)
++|.+ |.. ++++.++++||++||.. +.+++||+.+++|+.++.++..+. .+++++++++||++||...
T Consensus 154 ~~p~~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~ 226 (308)
T 1zgk_A 154 PMLTR-RIG-----VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS-GAGVCVLHNCIYAAGGYDG 226 (308)
T ss_dssp CCSSC-CBS-----CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB-SCEEEEETTEEEEECCBCS
T ss_pred CCCcc-ccc-----eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc-cceEEEECCEEEEEeCCCC
Confidence 99987 766 78889999999999975 579999999999999988776544 5566788999999998754
Q ss_pred CCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccce
Q 016239 279 PRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRC 358 (392)
Q Consensus 279 ~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~ 358 (392)
.. ...++|+||+.+++|+++..+|.. |..++++..+++|||+||.........+..+|+++++
T Consensus 227 ~~-~~~~v~~yd~~~~~W~~~~~~p~~-------------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--- 289 (308)
T 1zgk_A 227 QD-QLNSVERYDVETETWTFVAPMKHR-------------RSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT--- 289 (308)
T ss_dssp SS-BCCCEEEEETTTTEEEECCCCSSC-------------CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE---
T ss_pred CC-ccceEEEEeCCCCcEEECCCCCCC-------------ccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE---
Confidence 32 257889999999999999988866 4588899999999999996443333344455999999
Q ss_pred eeeecCCCCCcccccceEEE
Q 016239 359 SWRRLPQLPSPVNEFHKVIS 378 (392)
Q Consensus 359 ~W~~~~~~p~~~~~~~~~~~ 378 (392)
|+.+++||.++..++++++
T Consensus 290 -W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 290 -WSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp -EEEEEECSSCCBSCEEEEC
T ss_pred -EeecCCCCCCcccceeEeC
Confidence 9999999999999988764
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=300.64 Aligned_cols=273 Identities=15% Similarity=0.203 Sum_probs=228.7
Q ss_pred CCCCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEeecceEEeecC---------cceEecCCcCc
Q 016239 58 NASPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGANGFFFTTTP---------RFGFSRILNTS 128 (392)
Q Consensus 58 ~~~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g~i~v~gg---------~~~ynp~~~~~ 128 (392)
.+..++.+|++||.+. ..++++++||+.+++|..++++|.+|..++++..++.||++|| +++||+. +++
T Consensus 11 ~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~-~~~ 88 (302)
T 2xn4_A 11 PMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPV-KDQ 88 (302)
T ss_dssp ----CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETT-TTE
T ss_pred ccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCC-CCc
Confidence 3445778999999765 3567899999999999999999999999999999999999998 3899999 799
Q ss_pred eeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCC
Q 016239 129 WHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPAD 208 (392)
Q Consensus 129 W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 208 (392)
|+.++++|.+|..|+++++ +++||++||.+. .....++++||+.+++|+.++++|.+
T Consensus 89 W~~~~~~p~~r~~~~~~~~-----------------~~~iyv~GG~~~------~~~~~~~~~~d~~~~~W~~~~~~p~~ 145 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAVL-----------------NGLLYAVGGFDG------STGLSSVEAYNIKSNEWFHVAPMNTR 145 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE-----------------TTEEEEEEEECS------SCEEEEEEEEETTTTEEEEECCCSSC
T ss_pred eeeCCCCCccccceEEEEE-----------------CCEEEEEcCCCC------CccCceEEEEeCCCCeEeecCCCCCc
Confidence 9999999999999999999 999999999742 23456899999999999999999987
Q ss_pred CCCCCCccceeeEEECCEEEEEeecc-------cEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCC
Q 016239 209 FRSGYSSQYLSSALFRGRFYVFGIYS-------FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRG 281 (392)
Q Consensus 209 ~~~~~~~~~~~~~~~~g~ly~~gg~~-------~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~ 281 (392)
|.. ++++.++++||++||.. ..+++||+.+++|+.++.++..+ ..+++++.+++||++||.... .
T Consensus 146 -r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~-~ 217 (302)
T 2xn4_A 146 -RSS-----VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR-SGAGVGVLNNLLYAVGGHDGP-L 217 (302)
T ss_dssp -CBS-----CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCBSSS-S
T ss_pred -ccC-----ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc-ccccEEEECCEEEEECCCCCC-c
Confidence 766 78889999999999863 47999999999999998877644 455668889999999997543 2
Q ss_pred CceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeee
Q 016239 282 PSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWR 361 (392)
Q Consensus 282 ~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~ 361 (392)
...++|+||+.+++|++++.+|.. |..++++..+++|||+||.........+..+|+++++ |+
T Consensus 218 ~~~~~~~yd~~~~~W~~~~~~~~~-------------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~----W~ 280 (302)
T 2xn4_A 218 VRKSVEVYDPTTNAWRQVADMNMC-------------RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK----WT 280 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSC-------------CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE----EE
T ss_pred ccceEEEEeCCCCCEeeCCCCCCc-------------cccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe----EE
Confidence 246799999999999999998865 4578889999999999996433333334455999999 99
Q ss_pred ecC-CCCCcccccceEEEee
Q 016239 362 RLP-QLPSPVNEFHKVISFC 380 (392)
Q Consensus 362 ~~~-~~p~~~~~~~~~~~~~ 380 (392)
.++ +||.++..++++++..
T Consensus 281 ~~~~~~~~~r~~~~~~~~~~ 300 (302)
T 2xn4_A 281 VVSSCMSTGRSYAGVTVIDK 300 (302)
T ss_dssp ECSSCCSSCCBSCEEEEEEC
T ss_pred ECCcccCcccccceEEEecc
Confidence 997 8999998888877643
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=302.73 Aligned_cols=275 Identities=17% Similarity=0.182 Sum_probs=231.6
Q ss_pred CCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEeecceEEeecCc--------ceEecCCcCceeec
Q 016239 61 PRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGANGFFFTTTPR--------FGFSRILNTSWHLT 132 (392)
Q Consensus 61 ~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g~i~v~gg~--------~~ynp~~~~~W~~~ 132 (392)
..+.+|++||... .+++++||+.+++|..++++|.+|..++++..++.||++||. ++||+. +++|+.+
T Consensus 10 ~~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~-~~~W~~~ 85 (306)
T 3ii7_A 10 KHDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVV-KDSWYSK 85 (306)
T ss_dssp CCCEEEEEECCSS---TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETT-TTEEEEE
T ss_pred ccceEEEEeCCCC---CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCC-CCeEEEC
Confidence 3578999999765 588999999999999999999999999999999999999982 799999 7999999
Q ss_pred CCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCC
Q 016239 133 SPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSG 212 (392)
Q Consensus 133 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~ 212 (392)
+++|.+|..|+++++ +++||++||.+. ......++++||+.+++|+.++++|.+ |..
T Consensus 86 ~~~p~~r~~~~~~~~-----------------~~~iyv~GG~~~-----~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~ 142 (306)
T 3ii7_A 86 LGPPTPRDSLAACAA-----------------EGKIYTSGGSEV-----GNSALYLFECYDTRTESWHTKPSMLTQ-RCS 142 (306)
T ss_dssp ECCSSCCBSCEEEEE-----------------TTEEEEECCBBT-----TBSCCCCEEEEETTTTEEEEECCCSSC-CBS
T ss_pred CCCCccccceeEEEE-----------------CCEEEEECCCCC-----CCcEeeeEEEEeCCCCceEeCCCCcCC-cce
Confidence 999999999999999 999999999741 123456899999999999999999987 765
Q ss_pred CCccceeeEEECCEEEEEeec---------ccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCc
Q 016239 213 YSSQYLSSALFRGRFYVFGIY---------SFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPS 283 (392)
Q Consensus 213 ~~~~~~~~~~~~g~ly~~gg~---------~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~ 283 (392)
++++.++++||++||. ...+++||+.+++|+.+++++..+ ..+.++.++++||++||.... ...
T Consensus 143 -----~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~i~v~GG~~~~-~~~ 215 (306)
T 3ii7_A 143 -----HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR-KNHGLVFVKDKIFAVGGQNGL-GGL 215 (306)
T ss_dssp -----CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCEETT-EEB
T ss_pred -----eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh-hcceEEEECCEEEEEeCCCCC-CCC
Confidence 8888999999999986 356999999999999998777644 456668889999999987654 224
Q ss_pred eeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeec
Q 016239 284 FNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 284 ~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
.++|+||+.+++|++++.+|.. |..++++..+++|||+||.........+..+|+++++ |+.+
T Consensus 216 ~~~~~yd~~~~~W~~~~~~p~~-------------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~----W~~~ 278 (306)
T 3ii7_A 216 DNVEYYDIKLNEWKMVSPMPWK-------------GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK----WVAN 278 (306)
T ss_dssp CCEEEEETTTTEEEECCCCSCC-------------BSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTE----EEEE
T ss_pred ceEEEeeCCCCcEEECCCCCCC-------------ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe----EEeC
Confidence 6789999999999999998876 4588999999999999996544334445556999999 9999
Q ss_pred CCCCCcccccceEEEeecccccc
Q 016239 364 PQLPSPVNEFHKVISFCSTVSLH 386 (392)
Q Consensus 364 ~~~p~~~~~~~~~~~~~~~~~~~ 386 (392)
+++|.++..++++++.....+.+
T Consensus 279 ~~~~~~r~~~~~~~~~~~~~~~~ 301 (306)
T 3ii7_A 279 SKVRAFPVTSCLICVVDTCGANE 301 (306)
T ss_dssp EEEECCSCTTCEEEEEECC----
T ss_pred CCcccccceeEEEEECCcccCCh
Confidence 99999999998888776544443
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=296.72 Aligned_cols=270 Identities=14% Similarity=0.191 Sum_probs=229.4
Q ss_pred CCCEEEEEcc-cCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEeecceEEeecC---------cceEecCCcCc--
Q 016239 61 PRPWFFLFGL-HNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGANGFFFTTTP---------RFGFSRILNTS-- 128 (392)
Q Consensus 61 ~~~~l~~~gg-~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g~i~v~gg---------~~~ynp~~~~~-- 128 (392)
.++.+|++|| .+.....+++++||+.+++|..++++|.+|..++++..++.||++|| +++||+. +++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~-~~~~~ 91 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYT-ADEDG 91 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETT-CCTTC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECC-CCCCC
Confidence 4678999999 55556678999999999999999999999999999999999999998 3899999 789
Q ss_pred -eeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCC
Q 016239 129 -WHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPA 207 (392)
Q Consensus 129 -W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~ 207 (392)
|+.++++|.+|..|+++++ +++||++||... .....++++||+.+++|+.++++|.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~-----------------~~~lyv~GG~~~------~~~~~~~~~~d~~~~~W~~~~~~p~ 148 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL-----------------GDMIYVSGGFDG------SRRHTSMERYDPNIDQWSMLGDMQT 148 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE-----------------TTEEEEECCBCS------SCBCCEEEEEETTTTEEEEEEECSS
T ss_pred eeEECCCCCCCccceeEEEE-----------------CCEEEEEcccCC------CcccceEEEEcCCCCeEEECCCCCC
Confidence 9999999999999999999 999999999741 2235689999999999999999888
Q ss_pred CCCCCCCccceeeEEECCEEEEEeecc-----cEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCC
Q 016239 208 DFRSGYSSQYLSSALFRGRFYVFGIYS-----FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGP 282 (392)
Q Consensus 208 ~~~~~~~~~~~~~~~~~g~ly~~gg~~-----~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~ 282 (392)
+ |.. ++++.++++||++||.. ..+++||+.+++|+.++.++..+ ..+.++..+++||++||..... .
T Consensus 149 ~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~-~ 220 (301)
T 2vpj_A 149 A-REG-----AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR-SGAGVALLNDHIYVVGGFDGTA-H 220 (301)
T ss_dssp C-CBS-----CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCBCSSS-B
T ss_pred C-ccc-----ceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc-ccceEEEECCEEEEEeCCCCCc-c
Confidence 7 665 78889999999999975 57999999999999998777654 4566688899999999876432 2
Q ss_pred ceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeee
Q 016239 283 SFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRR 362 (392)
Q Consensus 283 ~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~ 362 (392)
..++|+||+.+++|++++.+|.. |..++++..+++||++||.........+..+|+++++ |+.
T Consensus 221 ~~~v~~yd~~~~~W~~~~~~p~~-------------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~----W~~ 283 (301)
T 2vpj_A 221 LSSVEAYNIRTDSWTTVTSMTTP-------------RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS----WEV 283 (301)
T ss_dssp CCCEEEEETTTTEEEEECCCSSC-------------CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTE----EEE
T ss_pred cceEEEEeCCCCcEEECCCCCCc-------------ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCe----EEE
Confidence 56789999999999999988876 4578889999999999995433222334445999999 999
Q ss_pred cCCCCCcccccceEEEe
Q 016239 363 LPQLPSPVNEFHKVISF 379 (392)
Q Consensus 363 ~~~~p~~~~~~~~~~~~ 379 (392)
+++||.++..++++++.
T Consensus 284 ~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 284 VTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp EEEEEEEEESCEEEEEE
T ss_pred cCCCCcccccceEEEeC
Confidence 99999999999888763
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=285.74 Aligned_cols=263 Identities=18% Similarity=0.226 Sum_probs=215.8
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCC--CCCCCcceEEeecceEEeecC---------------cceEecC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPA--QEPRAGSCFIGANGFFFTTTP---------------RFGFSRI 124 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~--~~~r~~~~~~~~~g~i~v~gg---------------~~~ynp~ 124 (392)
...++++|| .++++|||.+++|.. +++ |.+|.+++++..++.||++|| +++||+.
T Consensus 4 ~~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 4 QDLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp EEEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred ceEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 457888988 578999999999986 555 457999999999999999998 3799999
Q ss_pred CcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCC
Q 016239 125 LNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPP 204 (392)
Q Consensus 125 ~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 204 (392)
+++|+.++++|.+|..|+++++ +++||++||.+... ......++++||+.+++|+.+++
T Consensus 76 -~~~W~~~~~~p~~r~~~~~~~~-----------------~~~lyv~GG~~~~~---~~~~~~~~~~~d~~~~~W~~~~~ 134 (315)
T 4asc_A 76 -DSEWLGMPPLPSPRCLFGLGEA-----------------LNSIYVVGGREIKD---GERCLDSVMCYDRLSFKWGESDP 134 (315)
T ss_dssp -TTEEEECCCBSSCEESCEEEEE-----------------TTEEEEECCEESST---TCCBCCCEEEEETTTTEEEECCC
T ss_pred -CCeEEECCCCCcchhceeEEEE-----------------CCEEEEEeCCcCCC---CCcccceEEEECCCCCcEeECCC
Confidence 7999999999999999999999 99999999974211 12345689999999999999999
Q ss_pred CCCCCCCCCCccceeeEEECCEEEEEeecc------cEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecC
Q 016239 205 LPADFRSGYSSQYLSSALFRGRFYVFGIYS------FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNA 278 (392)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~------~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~ 278 (392)
+|.+ |.. ++++.++++||++||.. +.+++||+.+++|+.+++++..+ ..+++++.+++||++||...
T Consensus 135 ~p~~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~ 207 (315)
T 4asc_A 135 LPYV-VYG-----HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR-SLFGATVHDGRIIVAAGVTD 207 (315)
T ss_dssp CSSC-CBS-----CEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEEEEECS
T ss_pred CCCc-ccc-----eeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch-hceEEEEECCEEEEEeccCC
Confidence 9987 776 88899999999999982 58999999999999998877644 45566888999999999765
Q ss_pred CCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccC---------CCCeEEEEe
Q 016239 279 PRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHK---------KYPACVCEI 349 (392)
Q Consensus 279 ~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~---------~~~~~~~~~ 349 (392)
.. ...++|+||+.+++|++++.+|.. |..++++..+++|||+||.... .....+..+
T Consensus 208 ~~-~~~~~~~yd~~~~~W~~~~~~p~~-------------r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 208 TG-LTSSAEVYSITDNKWAPFEAFPQE-------------RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRY 273 (315)
T ss_dssp SS-EEEEEEEEETTTTEEEEECCCSSC-------------CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CC-ccceEEEEECCCCeEEECCCCCCc-------------ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEe
Confidence 42 356899999999999999998876 4588999999999999996421 111223345
Q ss_pred ecCCCccceeeeecCCCCCcccccceEEEee
Q 016239 350 GTESDKCRCSWRRLPQLPSPVNEFHKVISFC 380 (392)
Q Consensus 350 d~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~ 380 (392)
|+++++ |+.+ +|.++..++++++..
T Consensus 274 d~~~~~----W~~~--~~~~r~~~~~~~~~~ 298 (315)
T 4asc_A 274 NEEEKK----WEGV--LREIAYAAGATFLPV 298 (315)
T ss_dssp ETTTTE----EEEE--ESCSSCCSSCEEEEE
T ss_pred cCCCCh----hhhh--ccCCcCccceEEeCC
Confidence 999999 9999 455677777666544
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-37 Score=282.66 Aligned_cols=264 Identities=18% Similarity=0.241 Sum_probs=216.6
Q ss_pred CCCEEEEEcccCCCCCCCceeeeeCCCCceeeCC-CCCCCCCcceEEeecceEEeecC---------------cceEecC
Q 016239 61 PRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLP-PAQEPRAGSCFIGANGFFFTTTP---------------RFGFSRI 124 (392)
Q Consensus 61 ~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~~g~i~v~gg---------------~~~ynp~ 124 (392)
....++++|| ..+++|||.+++|...+ +.+.+|..++++..++.||++|| +++||+.
T Consensus 14 ~~~~i~~~GG-------~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~ 86 (318)
T 2woz_A 14 VKDLILLVND-------TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV 86 (318)
T ss_dssp EEEEEEEECS-------SEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT
T ss_pred ecchhhhccc-------cceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC
Confidence 3568999998 34799999999998843 22367888898999999999998 3689999
Q ss_pred CcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCC
Q 016239 125 LNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPP 204 (392)
Q Consensus 125 ~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 204 (392)
+++|+.++++|.+|..|+++++ +++||++||.... ......++++||+.+++|+.+++
T Consensus 87 -~~~W~~~~~~p~~r~~~~~~~~-----------------~~~iyv~GG~~~~----~~~~~~~~~~yd~~~~~W~~~~~ 144 (318)
T 2woz_A 87 -SSEWVGLPPLPSARCLFGLGEV-----------------DDKIYVVAGKDLQ----TEASLDSVLCYDPVAAKWSEVKN 144 (318)
T ss_dssp -TTEEEECSCBSSCBCSCEEEEE-----------------TTEEEEEEEEBTT----TCCEEEEEEEEETTTTEEEEECC
T ss_pred -CCcEEECCCCCccccccceEEE-----------------CCEEEEEcCccCC----CCcccceEEEEeCCCCCEeECCC
Confidence 7999999999999999999999 9999999997421 12345689999999999999999
Q ss_pred CCCCCCCCCCccceeeEEECCEEEEEeecc------cEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecC
Q 016239 205 LPADFRSGYSSQYLSSALFRGRFYVFGIYS------FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNA 278 (392)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~------~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~ 278 (392)
+|.+ |.+ ++++.++++||++||.. +++++||+.+++|+.+++++..+ ..+++++.+++||++||...
T Consensus 145 ~p~~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~ 217 (318)
T 2woz_A 145 LPIK-VYG-----HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-SMFGVAIHKGKIVIAGGVTE 217 (318)
T ss_dssp CSSC-EES-----CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEEEEEET
T ss_pred CCCc-ccc-----cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-ccceEEEECCEEEEEcCcCC
Confidence 9987 766 78888999999999963 47999999999999998877654 44566888999999999765
Q ss_pred CCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccC---------CCCeEEEEe
Q 016239 279 PRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHK---------KYPACVCEI 349 (392)
Q Consensus 279 ~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~---------~~~~~~~~~ 349 (392)
.. ....+|+||+.+++|++++.+|.. |..++++..+++||++||.... .....+..+
T Consensus 218 ~~-~~~~~~~yd~~~~~W~~~~~~p~~-------------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y 283 (318)
T 2woz_A 218 DG-LSASVEAFDLKTNKWEVMTEFPQE-------------RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKY 283 (318)
T ss_dssp TE-EEEEEEEEETTTCCEEECCCCSSC-------------CBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEE
T ss_pred CC-ccceEEEEECCCCeEEECCCCCCc-------------ccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEE
Confidence 32 256899999999999999998876 4578999999999999996431 112334556
Q ss_pred ecCCCccceeeeecCCCCCcccccceEEEee
Q 016239 350 GTESDKCRCSWRRLPQLPSPVNEFHKVISFC 380 (392)
Q Consensus 350 d~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~ 380 (392)
|+++++ |+.+ +|.++..++++++..
T Consensus 284 d~~~~~----W~~~--~~~~r~~~~~~~~~~ 308 (318)
T 2woz_A 284 EDDKKE----WAGM--LKEIRYASGASCLAT 308 (318)
T ss_dssp ETTTTE----EEEE--ESCCGGGTTCEEEEE
T ss_pred eCCCCE----ehhh--cccccccccceeeCC
Confidence 999999 9999 788888887776543
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.9e-35 Score=274.34 Aligned_cols=268 Identities=15% Similarity=0.090 Sum_probs=205.9
Q ss_pred cCCCCCCEEEEEcccCCCCCCCceeeeeCC--CCceeeCCCCC-CCCCcceEEeecceEEeecCc--------------c
Q 016239 57 TNASPRPWFFLFGLHNTSSRNNQSFAFDPA--SNSWFHLPPAQ-EPRAGSCFIGANGFFFTTTPR--------------F 119 (392)
Q Consensus 57 ~~~~~~~~l~~~gg~~~~~~~~~~~~yd~~--~~~W~~~~~~~-~~r~~~~~~~~~g~i~v~gg~--------------~ 119 (392)
.++..++.||++||... +++++||+. +++|..++++| .+|..+++++.++.||++||. +
T Consensus 14 ~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~ 89 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVH 89 (357)
T ss_dssp EEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEE
T ss_pred EEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEE
Confidence 44455899999999764 479999998 49999999999 899999999999999999884 7
Q ss_pred eEecCCcCceeecCCCC-cCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcc------------------
Q 016239 120 GFSRILNTSWHLTSPLR-FSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGL------------------ 180 (392)
Q Consensus 120 ~ynp~~~~~W~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~------------------ 180 (392)
+||+. +++|+++++++ .+|..|++++. +++||++||.+.....
T Consensus 90 ~yd~~-~~~W~~~~~~~p~~r~~~~~~~~-----------------~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
T 2uvk_A 90 KYNPK-TNSWVKLMSHAPMGMAGHVTFVH-----------------NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDK 151 (357)
T ss_dssp EEETT-TTEEEECSCCCSSCCSSEEEEEE-----------------TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred EEeCC-CCcEEECCCCCCcccccceEEEE-----------------CCEEEEEeCcCCCcCcccccchhhcCCcccchhh
Confidence 89999 79999999998 89999999888 9999999997421100
Q ss_pred ----------cccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc------cEEEEEEC--
Q 016239 181 ----------VDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS------FSVSSFDL-- 242 (392)
Q Consensus 181 ----------~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~------~~i~~yd~-- 242 (392)
.......++++||+.+++|+.++++|.+.+.. ++++.++++||++||.. ..++.||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~-----~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~ 226 (357)
T 2uvk_A 152 INAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAG-----AAVVNKGDKTWLINGEAKPGLRTDAVFELDFTG 226 (357)
T ss_dssp HHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBS-----CEEEEETTEEEEECCEEETTEECCCEEEEECC-
T ss_pred hhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCccc-----ccEEEECCEEEEEeeecCCCcccCceEEEEecC
Confidence 00012468999999999999999888763443 78889999999999963 47888876
Q ss_pred CCCceeecccCCCC-cccceeEEeeCCeEEEEEeecCCC----------------CCceeEEEeecCccceEecccCCHH
Q 016239 243 KKHVWSEVQTLRPP-GVMFSFLIASPNMLVLAGMCNAPR----------------GPSFNLWKVDELSMEFSEIAIMPHD 305 (392)
Q Consensus 243 ~~~~W~~i~~~~~~-~~~~~~~~~~~g~l~v~gg~~~~~----------------~~~~~v~~~d~~~~~W~~~~~~p~~ 305 (392)
.+++|+.+..++.+ .+..+++++.+++||++||..... .....+++||+.+++|++++.+|..
T Consensus 227 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 306 (357)
T 2uvk_A 227 NNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG 306 (357)
T ss_dssp --CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC
T ss_pred CCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC
Confidence 99999999887543 344556788999999999864321 1125788899999999999999876
Q ss_pred HHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEE-eecCCCccceeeeecCCCCC
Q 016239 306 FLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCE-IGTESDKCRCSWRRLPQLPS 368 (392)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~-~d~~~~~~~~~W~~~~~~p~ 368 (392)
|..++++..+++|||+||..........++ ++.++++ |.+..+.|.
T Consensus 307 -------------r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~----~~~~~~~~~ 353 (357)
T 2uvk_A 307 -------------RAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNK----VTVQNLEHH 353 (357)
T ss_dssp -------------CBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCS----CEEEC----
T ss_pred -------------cccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE----eEeeecccc
Confidence 457888999999999999654444344455 4889999 999988774
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.6e-36 Score=271.43 Aligned_cols=259 Identities=16% Similarity=0.226 Sum_probs=215.8
Q ss_pred hhhHHHhhccchhhhhhhcCcchhhHhhhccCCCCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEE
Q 016239 27 IPTLIRASSVCKSWRSIISAPSFSALIAHNTNASPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFI 106 (392)
Q Consensus 27 ~~~l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 106 (392)
..++..+++..++|..+...|. .+.. +.++..++.+|++||.+....+++++.||+.+++|..+++++.+|..++++
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~--~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 105 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPS--RRCR-AGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAA 105 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSS--CCBS-CEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred CCcEEEEcCcCCcEeEcccCCc--cccc-ceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEE
Confidence 4567788999999999876665 2322 244556889999999887777789999999999999999999999999999
Q ss_pred eecceEEeecC---------cceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeec
Q 016239 107 GANGFFFTTTP---------RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFI 177 (392)
Q Consensus 107 ~~~g~i~v~gg---------~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~ 177 (392)
..++.||++|| +++||+. +++|+.++++|.+|..++++++ +++||++||.+..
T Consensus 106 ~~~~~iyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~~~~~~~~-----------------~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 106 VLNGLLYAVGGFDGSTGLSSVEAYNIK-SNEWFHVAPMNTRRSSVGVGVV-----------------GGLLYAVGGYDVA 167 (302)
T ss_dssp EETTEEEEEEEECSSCEEEEEEEEETT-TTEEEEECCCSSCCBSCEEEEE-----------------TTEEEEECCEETT
T ss_pred EECCEEEEEcCCCCCccCceEEEEeCC-CCeEeecCCCCCcccCceEEEE-----------------CCEEEEEeCCCCC
Confidence 99999999998 3899999 7999999999999999999999 9999999998422
Q ss_pred CcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc-----cEEEEEECCCCceeeccc
Q 016239 178 GGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS-----FSVSSFDLKKHVWSEVQT 252 (392)
Q Consensus 178 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~-----~~i~~yd~~~~~W~~i~~ 252 (392)
. .....++++||+.+++|+.++++|.+ |.. ++++.++++||++||.. +.+++||+.+++|+.++.
T Consensus 168 ~----~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 168 S----RQCLSTVECYNATTNEWTYIAEMSTR-RSG-----AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp T----TEECCCEEEEETTTTEEEEECCCSSC-CBS-----CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC
T ss_pred C----CccccEEEEEeCCCCcEEECCCCccc-ccc-----ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC
Confidence 1 11256899999999999999999887 765 78899999999999974 489999999999999988
Q ss_pred CCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecc-cCCHHHHHhhcCCcccCccceeEEEEeCCEE
Q 016239 253 LRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIA-IMPHDFLYSLVDTEEDDKFASLKCVGLGNLI 331 (392)
Q Consensus 253 ~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i 331 (392)
++..+. .+.++..+++||++||.... ....++++||+.+++|+.++ .||.. |..+++++++++|
T Consensus 238 ~~~~r~-~~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~~~~~W~~~~~~~~~~-------------r~~~~~~~~~~~i 302 (302)
T 2xn4_A 238 MNMCRR-NAGVCAVNGLLYVVGGDDGS-CNLASVEYYNPTTDKWTVVSSCMSTG-------------RSYAGVTVIDKRL 302 (302)
T ss_dssp CSSCCB-SCEEEEETTEEEEECCBCSS-SBCCCEEEEETTTTEEEECSSCCSSC-------------CBSCEEEEEEC--
T ss_pred CCCccc-cCeEEEECCEEEEECCcCCC-cccccEEEEcCCCCeEEECCcccCcc-------------cccceEEEecccC
Confidence 776544 55568889999999986543 22467899999999999997 68766 5588888888775
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=8.3e-36 Score=273.20 Aligned_cols=262 Identities=15% Similarity=0.194 Sum_probs=213.1
Q ss_pred hhHHHhhccchhhhhhhcCcchhhHhhhccCCCCCCEEEEEcccC----C--CCCCCceeeeeCCCCceeeCCCCCCCCC
Q 016239 28 PTLIRASSVCKSWRSIISAPSFSALIAHNTNASPRPWFFLFGLHN----T--SSRNNQSFAFDPASNSWFHLPPAQEPRA 101 (392)
Q Consensus 28 ~~l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~~~~l~~~gg~~----~--~~~~~~~~~yd~~~~~W~~~~~~~~~r~ 101 (392)
+++..|++..++|.. ...|....+.. +.++..++.+|++||.. . ....++++.||+.+++|..++++|.+|.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNH-VSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSE-EEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE
T ss_pred CceEEECCCCCeEec-CCCCCCCCccc-eEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh
Confidence 456788999999975 54444334433 34555688999999952 1 1223458999999999999999999999
Q ss_pred cceEEeecceEEeecC------------cceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEE
Q 016239 102 GSCFIGANGFFFTTTP------------RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFI 169 (392)
Q Consensus 102 ~~~~~~~~g~i~v~gg------------~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 169 (392)
.++++..++.||++|| +++||+. +++|+.++++|.+|..|+++++ +++||
T Consensus 91 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~~~~~~~~-----------------~~~iy 152 (315)
T 4asc_A 91 LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRL-SFKWGESDPLPYVVYGHTVLSH-----------------MDLVY 152 (315)
T ss_dssp SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETT-TTEEEECCCCSSCCBSCEEEEE-----------------TTEEE
T ss_pred ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCC-CCcEeECCCCCCcccceeEEEE-----------------CCEEE
Confidence 9999999999999998 3899999 7999999999999999999999 99999
Q ss_pred EEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc-----cEEEEEECCC
Q 016239 170 VVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS-----FSVSSFDLKK 244 (392)
Q Consensus 170 v~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~-----~~i~~yd~~~ 244 (392)
++||... ......++++||+.+++|+.++++|.+ |.. ++++.++++||++||.. ..+++||+.+
T Consensus 153 v~GG~~~-----~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 153 VIGGKGS-----DRKCLNKMCVYDPKKFEWKELAPMQTA-RSL-----FGATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EECCBCT-----TSCBCCCEEEEETTTTEEEECCCCSSC-CBS-----CEEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred EEeCCCC-----CCcccceEEEEeCCCCeEEECCCCCCc-hhc-----eEEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 9999731 223456899999999999999999987 766 88899999999999975 3799999999
Q ss_pred CceeecccCCCCcccceeEEeeCCeEEEEEeecCC----C----CCceeEEEeecCccceEecccCCHHHHHhhcCCccc
Q 016239 245 HVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAP----R----GPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEED 316 (392)
Q Consensus 245 ~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~----~----~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~ 316 (392)
++|+.++.++..+. .+.++..+++||++||.... . ....++|+||+++++|+++...|
T Consensus 222 ~~W~~~~~~p~~r~-~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~------------- 287 (315)
T 4asc_A 222 NKWAPFEAFPQERS-SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREI------------- 287 (315)
T ss_dssp TEEEEECCCSSCCB-SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCS-------------
T ss_pred CeEEECCCCCCccc-ceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCC-------------
Confidence 99999988776544 55668889999999986431 1 12468999999999999994433
Q ss_pred CccceeEEEEeCCEEEEEec
Q 016239 317 DKFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 317 ~~~~~~~~~~~~~~i~v~gg 336 (392)
|..+++++++++||++..
T Consensus 288 --r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 288 --AYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp --SCCSSCEEEEEEECGGGS
T ss_pred --cCccceEEeCCEEEEEEe
Confidence 347888999999999874
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.5e-35 Score=268.21 Aligned_cols=246 Identities=17% Similarity=0.243 Sum_probs=207.9
Q ss_pred ChhhHHHhhccchhhhhhhcCcchhhHhhhccCCCCCCEEEEEccc----CCCCCCCceeeeeCCCCceeeCCCCCCCCC
Q 016239 26 PIPTLIRASSVCKSWRSIISAPSFSALIAHNTNASPRPWFFLFGLH----NTSSRNNQSFAFDPASNSWFHLPPAQEPRA 101 (392)
Q Consensus 26 P~~~l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~~~~l~~~gg~----~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~ 101 (392)
+..++..|++..++|..+...|.. +.. +.++..++.+|++||. .....+++++.||+.+++|..+++++.+|.
T Consensus 37 ~~~~~~~~d~~~~~W~~~~~~p~~--r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 113 (308)
T 1zgk_A 37 SLSYLEAYNPSNGTWLRLADLQVP--RSG-LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRN 113 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSC--CBS-CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCB
T ss_pred CcceEEEEcCCCCeEeECCCCCcc--ccc-ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcc
Confidence 456788899999999999766652 322 2445568899999997 444567889999999999999999999999
Q ss_pred cceEEeecceEEeecC---------cceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEe
Q 016239 102 GSCFIGANGFFFTTTP---------RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVG 172 (392)
Q Consensus 102 ~~~~~~~~g~i~v~gg---------~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~g 172 (392)
.++++..++.||++|| +++||+. +++|+.++++|.+|..++++++ +++||++|
T Consensus 114 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~-----------------~~~iyv~G 175 (308)
T 1zgk_A 114 RIGVGVIDGHIYAVGGSHGCIHHNSVERYEPE-RDEWHLVAPMLTRRIGVGVAVL-----------------NRLLYAVG 175 (308)
T ss_dssp TCEEEEETTEEEEECCEETTEECCCEEEEETT-TTEEEECCCCSSCCBSCEEEEE-----------------TTEEEEEC
T ss_pred ccEEEEECCEEEEEcCCCCCcccccEEEECCC-CCeEeECCCCCccccceEEEEE-----------------CCEEEEEe
Confidence 9999999999999998 3899999 7999999999999999999999 99999999
Q ss_pred ceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc-----cEEEEEECCCCce
Q 016239 173 GVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS-----FSVSSFDLKKHVW 247 (392)
Q Consensus 173 G~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~-----~~i~~yd~~~~~W 247 (392)
|.+. .....++++||+.+++|+.++++|.+ |.. ++++.++++||++||.. ..+++||+.+++|
T Consensus 176 G~~~------~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 176 GFDG------TNRLNSAECYYPERNEWRMITAMNTI-RSG-----AGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp CBCS------SCBCCCEEEEETTTTEEEECCCCSSC-CBS-----CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCC------CCcCceEEEEeCCCCeEeeCCCCCCc-ccc-----ceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 9742 12356899999999999999999987 766 78889999999999975 5799999999999
Q ss_pred eecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHH
Q 016239 248 SEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDF 306 (392)
Q Consensus 248 ~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~ 306 (392)
+.++.++..+ ..+.++..+++||++||.... ....++|+||+.+++|++++.||..+
T Consensus 244 ~~~~~~p~~r-~~~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~~~~~W~~~~~~p~~r 300 (308)
T 1zgk_A 244 TFVAPMKHRR-SALGITVHQGRIYVLGGYDGH-TFLDSVECYDPDTDTWSEVTRMTSGR 300 (308)
T ss_dssp EECCCCSSCC-BSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCC
T ss_pred EECCCCCCCc-cceEEEEECCEEEEEcCcCCC-cccceEEEEcCCCCEEeecCCCCCCc
Confidence 9998777654 455567889999999986543 23568999999999999999999773
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=6.5e-35 Score=266.13 Aligned_cols=247 Identities=14% Similarity=0.136 Sum_probs=207.7
Q ss_pred hhhHHHhhccchhhhhhhcCcchhhHhhhccCCCCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEE
Q 016239 27 IPTLIRASSVCKSWRSIISAPSFSALIAHNTNASPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFI 106 (392)
Q Consensus 27 ~~~l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 106 (392)
..++.+|++..++|..+...|. .+.. +.++..++.+|++||.+ ...+++++.||+.+++|..++++|.+|..++++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~--~r~~-~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFE--KRRD-AACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC 98 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSC--CCBS-CEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE
T ss_pred CceEEEecCCCCCEecCCCCCc--ccce-eEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccceeEE
Confidence 4677889999999999877665 3332 34455688999999987 567789999999999999999999999999999
Q ss_pred eecceEEeecCc----------ceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceee
Q 016239 107 GANGFFFTTTPR----------FGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRF 176 (392)
Q Consensus 107 ~~~g~i~v~gg~----------~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~ 176 (392)
..++.||++||. ++||+. +++|+.++++|.+|..|+++++ +++||++||...
T Consensus 99 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~~~~~~~~-----------------~~~iyv~GG~~~ 160 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNSALYLFECYDTR-TESWHTKPSMLTQRCSHGMVEA-----------------NGLIYVCGGSLG 160 (306)
T ss_dssp EETTEEEEECCBBTTBSCCCCEEEEETT-TTEEEEECCCSSCCBSCEEEEE-----------------TTEEEEECCEES
T ss_pred EECCEEEEECCCCCCCcEeeeEEEEeCC-CCceEeCCCCcCCcceeEEEEE-----------------CCEEEEECCCCC
Confidence 999999999983 799999 7999999999999999999999 999999999742
Q ss_pred cCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc-----cEEEEEECCCCceeecc
Q 016239 177 IGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS-----FSVSSFDLKKHVWSEVQ 251 (392)
Q Consensus 177 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~-----~~i~~yd~~~~~W~~i~ 251 (392)
... ......++++||+.+++|+.++++|.+ |.. ++++.++++||++||.. ..+++||+.+++|+.++
T Consensus 161 ~~~--~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~-----~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 161 NNV--SGRVLNSCEVYDPATETWTELCPMIEA-RKN-----HGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp CTT--TCEECCCEEEEETTTTEEEEECCCSSC-CBS-----CEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred CCC--cccccceEEEeCCCCCeEEECCCccch-hhc-----ceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 211 011256899999999999999999887 665 88899999999999974 47999999999999998
Q ss_pred cCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHH
Q 016239 252 TLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHD 305 (392)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~ 305 (392)
.++..+. .+.+++++++||++||..... ...++|+||+.+++|++++.+|..
T Consensus 233 ~~p~~r~-~~~~~~~~~~i~v~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~~~~ 284 (306)
T 3ii7_A 233 PMPWKGV-TVKCAAVGSIVYVLAGFQGVG-RLGHILEYNTETDKWVANSKVRAF 284 (306)
T ss_dssp CCSCCBS-CCEEEEETTEEEEEECBCSSS-BCCEEEEEETTTTEEEEEEEEECC
T ss_pred CCCCCcc-ceeEEEECCEEEEEeCcCCCe-eeeeEEEEcCCCCeEEeCCCcccc
Confidence 8776444 455678899999999975432 346899999999999999998866
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=263.82 Aligned_cols=245 Identities=16% Similarity=0.259 Sum_probs=208.4
Q ss_pred hhhHHHhhccchhhhhhhcCcchhhHhhhccCCCCCCEEEEEcccCCCCCCCceeeeeCCCCc---eeeCCCCCCCCCcc
Q 016239 27 IPTLIRASSVCKSWRSIISAPSFSALIAHNTNASPRPWFFLFGLHNTSSRNNQSFAFDPASNS---WFHLPPAQEPRAGS 103 (392)
Q Consensus 27 ~~~l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~r~~~ 103 (392)
..++..+++..++|..+...|. .+.. +.++..++.+|++||.......++++.||+.+++ |..++++|.+|..+
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~--~r~~-~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~ 106 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITR--KRRY-VASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA 106 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSS--CCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC
T ss_pred eeEEEEEcCCCCeEEeCCCCCh--hhcc-ccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce
Confidence 4577888999999999886665 2322 3445567899999998866677899999999999 99999999999999
Q ss_pred eEEeecceEEeecC---------cceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEece
Q 016239 104 CFIGANGFFFTTTP---------RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGV 174 (392)
Q Consensus 104 ~~~~~~g~i~v~gg---------~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~ 174 (392)
+++..++.||++|| +++||+. +++|+.++++|.+|..|+++++ +++||++||.
T Consensus 107 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~~~~~~~~-----------------~~~iyv~GG~ 168 (301)
T 2vpj_A 107 GATTLGDMIYVSGGFDGSRRHTSMERYDPN-IDQWSMLGDMQTAREGAGLVVA-----------------SGVIYCLGGY 168 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCEEEEEETT-TTEEEEEEECSSCCBSCEEEEE-----------------TTEEEEECCB
T ss_pred eEEEECCEEEEEcccCCCcccceEEEEcCC-CCeEEECCCCCCCcccceEEEE-----------------CCEEEEECCC
Confidence 99999999999998 3899999 7999999999999999999999 9999999997
Q ss_pred eecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc-----cEEEEEECCCCceee
Q 016239 175 RFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS-----FSVSSFDLKKHVWSE 249 (392)
Q Consensus 175 ~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~-----~~i~~yd~~~~~W~~ 249 (392)
+. .....++++||+.+++|+.++++|.+ |.. ++++.++++||++||.. +.++.||+.+++|+.
T Consensus 169 ~~------~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~-----~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 169 DG------LNILNSVEKYDPHTGHWTNVTPMATK-RSG-----AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp CS------SCBCCCEEEEETTTTEEEEECCCSSC-CBS-----CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CC------CcccceEEEEeCCCCcEEeCCCCCcc-ccc-----ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 42 12456899999999999999999887 665 78899999999999974 589999999999999
Q ss_pred cccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHH
Q 016239 250 VQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDF 306 (392)
Q Consensus 250 i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~ 306 (392)
++.++..+. .+.++..+++||++||..... ...++|+||+++++|+.++.||..+
T Consensus 237 ~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~~W~~~~~~~~~r 291 (301)
T 2vpj_A 237 VTSMTTPRC-YVGATVLRGRLYAIAGYDGNS-LLSSIECYDPIIDSWEVVTSMGTQR 291 (301)
T ss_dssp ECCCSSCCB-SCEEEEETTEEEEECCBCSSS-BEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred CCCCCCccc-ceeEEEECCEEEEEcCcCCCc-ccccEEEEcCCCCeEEEcCCCCccc
Confidence 988776554 455678899999999865432 3478999999999999999998773
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8.2e-35 Score=266.95 Aligned_cols=260 Identities=16% Similarity=0.231 Sum_probs=210.6
Q ss_pred hHHHhhccchhhhhhhcCcchhhHhhhccCCCCCCEEEEEcccCCC------CCCCceeeeeCCCCceeeCCCCCCCCCc
Q 016239 29 TLIRASSVCKSWRSIISAPSFSALIAHNTNASPRPWFFLFGLHNTS------SRNNQSFAFDPASNSWFHLPPAQEPRAG 102 (392)
Q Consensus 29 ~l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~~~~l~~~gg~~~~------~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 102 (392)
++..|++..++|.. ...+....+. +++++..++.+|++||.... .....++.||+.+++|..++++|.+|..
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~~~~r~-~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAEQIPRN-HSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEE-EEECTTSCSS-EEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS
T ss_pred ceEEECCCCCceec-ccCCccCCcc-ceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc
Confidence 35678899999987 3333222332 33556678899999995311 1234589999999999999999999999
Q ss_pred ceEEeecceEEeecC-----------cceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEE
Q 016239 103 SCFIGANGFFFTTTP-----------RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVV 171 (392)
Q Consensus 103 ~~~~~~~g~i~v~gg-----------~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~ 171 (392)
++++..++.||++|| +++||+. +++|+.++++|.+|..|+++++ +++||++
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~-----------------~~~iyv~ 164 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPV-AAKWSEVKNLPIKVYGHNVISH-----------------NGMIYCL 164 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETT-TTEEEEECCCSSCEESCEEEEE-----------------TTEEEEE
T ss_pred cceEEECCEEEEEcCccCCCCcccceEEEEeCC-CCCEeECCCCCCcccccEEEEE-----------------CCEEEEE
Confidence 999999999999987 2899999 7999999999999999999998 9999999
Q ss_pred eceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc-----cEEEEEECCCCc
Q 016239 172 GGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS-----FSVSSFDLKKHV 246 (392)
Q Consensus 172 gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~-----~~i~~yd~~~~~ 246 (392)
||... ......++++||+.+++|+.++++|.+ |.. ++++.++++||++||.. ..+++||+.+++
T Consensus 165 GG~~~-----~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 165 GGKTD-----DKKCTNRVFIYNPKKGDWKDLAPMKTP-RSM-----FGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CCEES-----SSCBCCCEEEEETTTTEEEEECCCSSC-CBS-----CEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred cCCCC-----CCCccceEEEEcCCCCEEEECCCCCCC-ccc-----ceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 99742 122356899999999999999999887 665 78899999999999964 478999999999
Q ss_pred eeecccCCCCcccceeEEeeCCeEEEEEeecCCC--------CCceeEEEeecCccceEecccCCHHHHHhhcCCcccCc
Q 016239 247 WSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPR--------GPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDK 318 (392)
Q Consensus 247 W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~--------~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~ 318 (392)
|+.++.+|..+ ..+.++..+++||++||..... ....++|+||+.+++|+++ +|..
T Consensus 234 W~~~~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~------------- 297 (318)
T 2woz_A 234 WEVMTEFPQER-SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEI------------- 297 (318)
T ss_dssp EEECCCCSSCC-BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCC-------------
T ss_pred EEECCCCCCcc-cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccc-------------
Confidence 99998877654 4556788999999999865421 2246899999999999998 4444
Q ss_pred cceeEEEEeCCEEEEEe
Q 016239 319 FASLKCVGLGNLIYVFN 335 (392)
Q Consensus 319 ~~~~~~~~~~~~i~v~g 335 (392)
|..++++.++++|||+.
T Consensus 298 r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 298 RYASGASCLATRLNLFK 314 (318)
T ss_dssp GGGTTCEEEEEEEEGGG
T ss_pred cccccceeeCCEEEEEE
Confidence 34788889999999875
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-33 Score=263.51 Aligned_cols=247 Identities=14% Similarity=0.085 Sum_probs=192.7
Q ss_pred eCCCCCCCCCcceEEeecceEEeecCc-----ceEecCC-cCceeecCCCC-cCccCceEEEEEcCCCCcccccCCcccC
Q 016239 92 HLPPAQEPRAGSCFIGANGFFFTTTPR-----FGFSRIL-NTSWHLTSPLR-FSRINPLVGVFYDHDRGHCDLASGFACN 164 (392)
Q Consensus 92 ~~~~~~~~r~~~~~~~~~g~i~v~gg~-----~~ynp~~-~~~W~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (392)
.+++||.+|.+++++..++.||++||. ++||+.+ +++|+.++++| .+|..|+++++
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~----------------- 64 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI----------------- 64 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-----------------
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-----------------
Confidence 578899999988888889999999983 8999972 48999999999 89999999999
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCC-CCCCCCCCccceeeEEECCEEEEEeecc---------
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLP-ADFRSGYSSQYLSSALFRGRFYVFGIYS--------- 234 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~g~ly~~gg~~--------- 234 (392)
+++||++||....+. .......++++||+.+++|+.+++++ .+ |.. ++++.++++||++||..
T Consensus 65 ~~~lyv~GG~~~~~~-~~~~~~~~v~~yd~~~~~W~~~~~~~p~~-r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~ 137 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSE-GLTQVFNDVHKYNPKTNSWVKLMSHAPMG-MAG-----HVTFVHNGKAYVTGGVNQNIFNGYFE 137 (357)
T ss_dssp TTEEEEECCEEECTT-SCEEECCCEEEEETTTTEEEECSCCCSSC-CSS-----EEEEEETTEEEEEECCCHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCC-ccceeeccEEEEeCCCCcEEECCCCCCcc-ccc-----ceEEEECCEEEEEeCcCCCcCccccc
Confidence 999999999722000 01133568999999999999999888 55 665 78888999999999953
Q ss_pred ------------------------------cEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCce
Q 016239 235 ------------------------------FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSF 284 (392)
Q Consensus 235 ------------------------------~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~ 284 (392)
+.+++||+.+++|+.+..++..++..++++..+++||++||.........
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 217 (357)
T 2uvk_A 138 DLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTD 217 (357)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECC
T ss_pred chhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccC
Confidence 58999999999999998877656665777889999999998654433356
Q ss_pred eEEEeec--CccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccC----------------CCCeEE
Q 016239 285 NLWKVDE--LSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHK----------------KYPACV 346 (392)
Q Consensus 285 ~v~~~d~--~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~----------------~~~~~~ 346 (392)
++|.||. .+++|+++..+|..+ ++..++++..+++|||+||.... ......
T Consensus 218 ~v~~~d~d~~~~~W~~~~~~~~~~-----------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~ 286 (357)
T 2uvk_A 218 AVFELDFTGNNLKWNKLAPVSSPD-----------GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYS 286 (357)
T ss_dssp CEEEEECC---CEEEECCCSSTTT-----------CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEEC
T ss_pred ceEEEEecCCCCcEEecCCCCCCc-----------ccccceEEEECCEEEEEcCccccCCcccccccceeccccccceee
Confidence 7777765 899999999987553 25577899999999999995321 111122
Q ss_pred EE-eecCCCccceeeeecCCCCCcccccceEE
Q 016239 347 CE-IGTESDKCRCSWRRLPQLPSPVNEFHKVI 377 (392)
Q Consensus 347 ~~-~d~~~~~~~~~W~~~~~~p~~~~~~~~~~ 377 (392)
++ +|+++++ |+.++++|.++..+++++
T Consensus 287 ~~~yd~~~~~----W~~~~~~p~~r~~~~~~~ 314 (357)
T 2uvk_A 287 TDIHLWHNGK----WDKSGELSQGRAYGVSLP 314 (357)
T ss_dssp CEEEECC-------CEEEEECSSCCBSSEEEE
T ss_pred EEEEecCCCc----eeeCCCCCCCcccceeEE
Confidence 34 4999999 999999999988876553
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=3.3e-30 Score=259.31 Aligned_cols=238 Identities=13% Similarity=0.097 Sum_probs=190.6
Q ss_pred CCCEEEEEcccCCCCCCCceeeeeCCCCceeeCC-C-----CCCCCCcceEEee--cceEEeecCc----------ceEe
Q 016239 61 PRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLP-P-----AQEPRAGSCFIGA--NGFFFTTTPR----------FGFS 122 (392)
Q Consensus 61 ~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~-~-----~~~~r~~~~~~~~--~g~i~v~gg~----------~~yn 122 (392)
.++.+|++||... ..++++++||+.+++|..++ + +|.+|..|+++.. +|.||++||. ++||
T Consensus 396 ~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 6788999999877 77789999999999999987 5 7889999999999 9999999983 8999
Q ss_pred cCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecC
Q 016239 123 RILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELC 202 (392)
Q Consensus 123 p~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~ 202 (392)
+. +++|+.++++|.+|..|+++++. +++||++||... .. ++++||+.+++|+.+
T Consensus 475 ~~-t~~W~~~~~~p~~R~~h~~~~~~----------------~~~iyv~GG~~~-------~~--~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 475 MK-TREWSMIKSLSHTRFRHSACSLP----------------DGNVLILGGVTE-------GP--AMLLYNVTEEIFKDV 528 (695)
T ss_dssp TT-TTEEEECCCCSBCCBSCEEEECT----------------TSCEEEECCBCS-------SC--SEEEEETTTTEEEEC
T ss_pred CC-CCcEEECCCCCCCcccceEEEEc----------------CCEEEEECCCCC-------CC--CEEEEECCCCceEEc
Confidence 99 79999999999999999999842 889999999731 12 799999999999999
Q ss_pred CC---CCCCCCCCCCccceeeEEEC---CEEEEEeecc-------cEEEEEECCCCc------eeecccCCCCcccceeE
Q 016239 203 PP---LPADFRSGYSSQYLSSALFR---GRFYVFGIYS-------FSVSSFDLKKHV------WSEVQTLRPPGVMFSFL 263 (392)
Q Consensus 203 ~~---~~~~~~~~~~~~~~~~~~~~---g~ly~~gg~~-------~~i~~yd~~~~~------W~~i~~~~~~~~~~~~~ 263 (392)
++ +|.+ |.+ +++++++ ++||++||.. +.+++||+.+++ |+.+..+++..+..+.+
T Consensus 529 ~~~g~~p~~-r~~-----~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~ 602 (695)
T 2zwa_A 529 TPKDEFFQN-SLV-----SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI 602 (695)
T ss_dssp CCSSGGGGS-CCB-----SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEE
T ss_pred cCCCCCCCc-ccc-----eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceE
Confidence 86 7776 665 6767766 8999999972 579999999999 88887754434455666
Q ss_pred EeeC-CeEEEEEeecCCC--CCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCC-EEEEEecc
Q 016239 264 IASP-NMLVLAGMCNAPR--GPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGN-LIYVFNEE 337 (392)
Q Consensus 264 ~~~~-g~l~v~gg~~~~~--~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~v~gg~ 337 (392)
++.+ ++||++||..... ....+++.||+.+++|+.+ .+|..... .+.+.+..++++.+++ +|||+||.
T Consensus 603 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~~~~-----~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 603 KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSI-PISRRIWE-----DHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEEC-CCCHHHHH-----HSCCCCSSCEEECC---CEEEECCE
T ss_pred EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEe-eccccccC-----CCCccceeeeEEEeCCCEEEEEeCC
Confidence 7788 9999999975443 2356788999999999954 56655321 1112345677777776 99999995
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=8.3e-31 Score=263.19 Aligned_cols=299 Identities=12% Similarity=0.086 Sum_probs=217.8
Q ss_pred HHHhhccchhhhhhhcCcchhhHhhhccCCCC-CCEEEEEcccCCCC------CCCceeeeeCCCCceeeCCCCCCCCCc
Q 016239 30 LIRASSVCKSWRSIISAPSFSALIAHNTNASP-RPWFFLFGLHNTSS------RNNQSFAFDPASNSWFHLPPAQEPRAG 102 (392)
Q Consensus 30 l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~-~~~l~~~gg~~~~~------~~~~~~~yd~~~~~W~~~~~~~~~r~~ 102 (392)
+..+++...+|..+...|. ..++.+... ++.+|++||..... ....+++||+.+++|..++.++.+|..
T Consensus 168 ~~~~dp~~~~W~~~~~~P~----~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI----VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS----CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC
T ss_pred cccCCCCCCeeeeeccCCC----CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC
Confidence 4567788899998887765 112233333 88999999975432 224689999999999999888888766
Q ss_pred ce--EE-eecceEEeecC-----cceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEece
Q 016239 103 SC--FI-GANGFFFTTTP-----RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGV 174 (392)
Q Consensus 103 ~~--~~-~~~g~i~v~gg-----~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~ 174 (392)
++ ++ ..+|.||++|| +++|||. +++|..+++|+.+|..|+++++. +++||++||.
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~-t~~W~~~~~~~~~R~~~s~~~~~----------------dg~iyv~GG~ 306 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSS-SDSWIPGPDMQVARGYQSSATMS----------------DGRVFTIGGS 306 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGG-GTEEEECCCCSSCCSSCEEEECT----------------TSCEEEECCC
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCc-CCceeECCCCCccccccceEEec----------------CCeEEEEeCc
Confidence 54 33 35899999999 4899999 79999999999999999888772 7899999994
Q ss_pred eecCcccccccceEEEEEeCCCCCeecCC-----CCCCCCCCCCCccceeeEEECCEEEEEeecc---------cEEEEE
Q 016239 175 RFIGGLVDIEDRLAVEIYDPHSDSWELCP-----PLPADFRSGYSSQYLSSALFRGRFYVFGIYS---------FSVSSF 240 (392)
Q Consensus 175 ~~~~~~~~~~~~~~~~~yd~~~~~W~~~~-----~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~---------~~i~~y 240 (392)
.. ......++++||+.+++|+.++ +++.. +. ++++..++++|++||.. ..++.|
T Consensus 307 ~~-----~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~-~~------~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~y 374 (656)
T 1k3i_A 307 WS-----GGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA-DK------QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY 374 (656)
T ss_dssp CC-----SSSCCCCEEEEETTTTEEEEETTSCSGGGCCC-CT------TGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred cc-----CCcccccceEeCCCCCcceeCCCccccccccc-cc------cceeecCCceEEEECCCCcEEEecCccceeee
Confidence 21 1224568999999999999974 33333 22 34555789999999764 368899
Q ss_pred ECCCCceeecccCCC-------CcccceeEE--eeCCeEEEEEeecCCC----C-CceeEEEeecCccceEecc--cCCH
Q 016239 241 DLKKHVWSEVQTLRP-------PGVMFSFLI--ASPNMLVLAGMCNAPR----G-PSFNLWKVDELSMEFSEIA--IMPH 304 (392)
Q Consensus 241 d~~~~~W~~i~~~~~-------~~~~~~~~~--~~~g~l~v~gg~~~~~----~-~~~~v~~~d~~~~~W~~~~--~~p~ 304 (392)
|+.+++|.......+ .+....+++ ..+++||++||..... . ....++.||+.+++|+++. .||.
T Consensus 375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~ 454 (656)
T 1k3i_A 375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF 454 (656)
T ss_dssp ECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS
T ss_pred ecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC
Confidence 999999876432221 122223222 3599999999864311 1 1236788899999999986 7887
Q ss_pred HHHHhhcCCcccCccceeEEEEe-CCEEEEEeccccC-----CCCeEEEEe-ecCCCccceeeeecCCCCCcccccceEE
Q 016239 305 DFLYSLVDTEEDDKFASLKCVGL-GNLIYVFNEEYHK-----KYPACVCEI-GTESDKCRCSWRRLPQLPSPVNEFHKVI 377 (392)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~gg~~~~-----~~~~~~~~~-d~~~~~~~~~W~~~~~~p~~~~~~~~~~ 377 (392)
. |..++++++ +++|||+||.... ......+++ |+++++ |+.++++|.+|..|++++
T Consensus 455 ~-------------R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~----W~~~~~~~~~R~~hs~a~ 517 (656)
T 1k3i_A 455 A-------------RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT----FYKQNPNSIVRVYHSISL 517 (656)
T ss_dssp C-------------CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE----EEECCCCSSCCCTTEEEE
T ss_pred C-------------cccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc----eeecCCCCCccccccHhh
Confidence 6 446676666 9999999996432 112233444 999999 999999999999997665
Q ss_pred E
Q 016239 378 S 378 (392)
Q Consensus 378 ~ 378 (392)
+
T Consensus 518 l 518 (656)
T 1k3i_A 518 L 518 (656)
T ss_dssp E
T ss_pred c
Confidence 5
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.95 E-value=8.1e-27 Score=234.66 Aligned_cols=232 Identities=9% Similarity=0.067 Sum_probs=176.5
Q ss_pred eeeCCCCCCCCCcceEEeecceEEeecC--------cceEecCCcCceeecC-C-----CCcCccCceEEEEEcCCCCcc
Q 016239 90 WFHLPPAQEPRAGSCFIGANGFFFTTTP--------RFGFSRILNTSWHLTS-P-----LRFSRINPLVGVFYDHDRGHC 155 (392)
Q Consensus 90 W~~~~~~~~~r~~~~~~~~~g~i~v~gg--------~~~ynp~~~~~W~~~~-~-----~~~~r~~~~~~~~~~~~~~~~ 155 (392)
|...+..+..|.++ +++.++.||++|| +++||+. +++|+.++ + +|.+|..|+++++..
T Consensus 379 ~~~~~~~p~rr~g~-~~~~~~~iyv~GG~~~~~~~~v~~yd~~-~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~------ 450 (695)
T 2zwa_A 379 LLECECPINRKFGD-VDVAGNDVFYMGGSNPYRVNEILQLSIH-YDKIDMKNIEVSSSEVPVARMCHTFTTISR------ 450 (695)
T ss_dssp EEECCCTTCCBSCE-EEECSSCEEEECCBSSSBCCCEEEEEEC-SSCEEEEECCCCCSCCCCCCBSCEEEEETT------
T ss_pred EeccCCCCCCceeE-EEEECCEEEEECCCCCCCcCcEEEEECC-CCeEEEeccCCCCCCCCccccceEEEEEcc------
Confidence 44445555555544 4448999999999 3899999 79999988 5 789999999998821
Q ss_pred cccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-CCEEEEEeecc
Q 016239 156 DLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-RGRFYVFGIYS 234 (392)
Q Consensus 156 ~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~ 234 (392)
+++||++||.... .....++++||+.+++|+.++++|.+ |.. |+++.+ +++||++||..
T Consensus 451 ---------~~~lyv~GG~~~~-----~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~-----h~~~~~~~~~iyv~GG~~ 510 (695)
T 2zwa_A 451 ---------NNQLLLIGGRKAP-----HQGLSDNWIFDMKTREWSMIKSLSHT-RFR-----HSACSLPDGNVLILGGVT 510 (695)
T ss_dssp ---------TTEEEEECCBSST-----TCBCCCCEEEETTTTEEEECCCCSBC-CBS-----CEEEECTTSCEEEECCBC
T ss_pred ---------CCEEEEEcCCCCC-----CCccccEEEEeCCCCcEEECCCCCCC-ccc-----ceEEEEcCCEEEEECCCC
Confidence 4689999998421 12356899999999999999999987 776 788886 99999999976
Q ss_pred c--EEEEEECCCCceeeccc---CCCCcccceeEEeeC---CeEEEEEeecCCC-CCceeEEEeecCccc------eEec
Q 016239 235 F--SVSSFDLKKHVWSEVQT---LRPPGVMFSFLIASP---NMLVLAGMCNAPR-GPSFNLWKVDELSME------FSEI 299 (392)
Q Consensus 235 ~--~i~~yd~~~~~W~~i~~---~~~~~~~~~~~~~~~---g~l~v~gg~~~~~-~~~~~v~~~d~~~~~------W~~~ 299 (392)
. .+++||+.+++|+.++. +|..+.. +++++++ ++||++||..... ....++|+||+.+++ |+++
T Consensus 511 ~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~-~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~ 589 (695)
T 2zwa_A 511 EGPAMLLYNVTEEIFKDVTPKDEFFQNSLV-SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK 589 (695)
T ss_dssp SSCSEEEEETTTTEEEECCCSSGGGGSCCB-SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE
T ss_pred CCCCEEEEECCCCceEEccCCCCCCCcccc-eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc
Confidence 4 79999999999999976 4444444 4434545 8999999975443 335789999999999 8998
Q ss_pred ccCCHHHHHhhcCCcccCccceeEEEEeC-CEEEEEeccccCC---CCeEEEEeecCCCccceeeeecCCCC
Q 016239 300 AIMPHDFLYSLVDTEEDDKFASLKCVGLG-NLIYVFNEEYHKK---YPACVCEIGTESDKCRCSWRRLPQLP 367 (392)
Q Consensus 300 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~gg~~~~~---~~~~~~~~d~~~~~~~~~W~~~~~~p 367 (392)
..+|.. +|..++++.++ ++|||+||..... ....+..+|+++++ |+.+ ++|
T Consensus 590 ~~~p~~------------~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~----W~~~-~~p 644 (695)
T 2zwa_A 590 LQHPLF------------QRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET----LTSI-PIS 644 (695)
T ss_dssp EECGGG------------CCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE----EEEC-CCC
T ss_pred CCCCCC------------CcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe----EEEe-ecc
Confidence 886532 25688888888 9999999954221 23344556999999 9964 444
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=1.6e-27 Score=239.32 Aligned_cols=269 Identities=10% Similarity=-0.014 Sum_probs=193.2
Q ss_pred hhHHHhhccchhhhhhhcCcchhhHhhhccCCCCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEe
Q 016239 28 PTLIRASSVCKSWRSIISAPSFSALIAHNTNASPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIG 107 (392)
Q Consensus 28 ~~l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 107 (392)
.++..+++..++|+.+...|.....+.+..+...++.||++||... .++++||+.+++|..+++|+.+|..++++.
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~----~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~ 294 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----KKTSLYDSSSDSWIPGPDMQVARGYQSSAT 294 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST----TCEEEEEGGGTEEEECCCCSSCCSSCEEEE
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC----CceEEecCcCCceeECCCCCccccccceEE
Confidence 3567788999999988765542222222233457889999999764 368999999999999999999999999888
Q ss_pred e-cceEEeecCc----------ceEecCCcCceeecC-----CCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEE
Q 016239 108 A-NGFFFTTTPR----------FGFSRILNTSWHLTS-----PLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVV 171 (392)
Q Consensus 108 ~-~g~i~v~gg~----------~~ynp~~~~~W~~~~-----~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~ 171 (392)
+ +|.||++||. ++|||. +++|+.++ +++..|.. +++.. ++++|++
T Consensus 295 ~~dg~iyv~GG~~~~~~~~~~~e~yd~~-t~~W~~~~~~~~~p~~~~~~~-~~~~~-----------------~~~iyv~ 355 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGGVFEKNGEVYSPS-SKTWTSLPNAKVNPMLTADKQ-GLYRS-----------------DNHAWLF 355 (656)
T ss_dssp CTTSCEEEECCCCCSSSCCCCEEEEETT-TTEEEEETTSCSGGGCCCCTT-GGGTT-----------------TCSCCEE
T ss_pred ecCCeEEEEeCcccCCcccccceEeCCC-CCcceeCCCcccccccccccc-ceeec-----------------CCceEEE
Confidence 8 9999999992 899999 79999974 45555432 33334 8899999
Q ss_pred eceeecCcccccccceEEEEEeCCCCCeecCCCC-CC-----CCCCCCCccceeeEE---ECCEEEEEeeccc-------
Q 016239 172 GGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPL-PA-----DFRSGYSSQYLSSAL---FRGRFYVFGIYSF------- 235 (392)
Q Consensus 172 gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-~~-----~~~~~~~~~~~~~~~---~~g~ly~~gg~~~------- 235 (392)
||.+... .......+++.||+.++.|...... +. +.+. .+.++. .+++||++||...
T Consensus 356 Gg~~g~~--~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~-----~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 356 GWKKGSV--FQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAM-----CGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp ECGGGCE--EECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCB-----TCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred ECCCCcE--EEecCccceeeeecCCcceeecCCccccccccCCCCC-----CCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 9863110 0111345899999999998754221 11 0011 134443 4899999999631
Q ss_pred ----EEEEEECCCCceeecc--cCCCCcccceeEEeeCCeEEEEEeecCC-----CCCceeEEEeecCccceEecccCCH
Q 016239 236 ----SVSSFDLKKHVWSEVQ--TLRPPGVMFSFLIASPNMLVLAGMCNAP-----RGPSFNLWKVDELSMEFSEIAIMPH 304 (392)
Q Consensus 236 ----~i~~yd~~~~~W~~i~--~~~~~~~~~~~~~~~~g~l~v~gg~~~~-----~~~~~~v~~~d~~~~~W~~~~~~p~ 304 (392)
.++.||+.+++|..+. .++..+..+.+++..+|+||++||.... ......++.||+.+++|+.+..+|.
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~ 508 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI 508 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC
Confidence 7899999999999986 6665555444434449999999986422 1224567788999999999998886
Q ss_pred HHHHhhcCCcccCccceeEEEEe--CCEEEEEecccc
Q 016239 305 DFLYSLVDTEEDDKFASLKCVGL--GNLIYVFNEEYH 339 (392)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~gg~~~ 339 (392)
. |..++++++ +++||++||...
T Consensus 509 ~-------------R~~hs~a~ll~dg~v~v~GG~~~ 532 (656)
T 1k3i_A 509 V-------------RVYHSISLLLPDGRVFNGGGGLC 532 (656)
T ss_dssp C-------------CCTTEEEEECTTSCEEEEECCCC
T ss_pred c-------------cccccHhhcCCCcEEEecCCCCC
Confidence 6 446666666 999999999643
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.96 E-value=1.3e-07 Score=89.82 Aligned_cols=45 Identities=20% Similarity=0.391 Sum_probs=40.6
Q ss_pred CcccCCcHHHHHHHHhhCChhhHHHhhccchhhhhhhcCcchhhH
Q 016239 8 SAFTTLSTDITERILSLLPIPTLIRASSVCKSWRSIISAPSFSAL 52 (392)
Q Consensus 8 ~~~~~Lp~dl~~~iL~rLP~~~l~~~~~v~k~W~~l~~~~~f~~~ 52 (392)
..+..||+|++..||++|+.+++.++..|||+|+.++.++.+++.
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~ 61 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE 61 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhh
Confidence 458899999999999999999999999999999999988766554
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.94 E-value=7.4e-08 Score=91.24 Aligned_cols=44 Identities=34% Similarity=0.471 Sum_probs=38.5
Q ss_pred CcccCCcHH----HHHHHHhhCChhhHHHhhccchhhhhhhcCcchhh
Q 016239 8 SAFTTLSTD----ITERILSLLPIPTLIRASSVCKSWRSIISAPSFSA 51 (392)
Q Consensus 8 ~~~~~Lp~d----l~~~iL~rLP~~~l~~~~~v~k~W~~l~~~~~f~~ 51 (392)
..+..||+| |+..||++|+.++|.++..|||+|+.++.++.+++
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~ 56 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWK 56 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 357889999 99999999999999999999999999887665443
No 21
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.89 E-value=1e-09 Score=70.99 Aligned_cols=47 Identities=30% Similarity=0.544 Sum_probs=39.7
Q ss_pred CCCcccCCcHHHHHHHHhhCChhhHHHhhccchhhhhhhcCcchhhH
Q 016239 6 PYSAFTTLSTDITERILSLLPIPTLIRASSVCKSWRSIISAPSFSAL 52 (392)
Q Consensus 6 ~~~~~~~Lp~dl~~~iL~rLP~~~l~~~~~v~k~W~~l~~~~~f~~~ 52 (392)
+...|..||+|++.+||++||.+++.+++.|||+|+.++.++.+.+.
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~ 51 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC--
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHh
Confidence 34679999999999999999999999999999999999999887654
No 22
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.84 E-value=7.1e-07 Score=84.96 Aligned_cols=43 Identities=26% Similarity=0.475 Sum_probs=38.4
Q ss_pred CcccCCcHHHHHHHHhhCChhhHHHhhccchhhhhhhcC-cchh
Q 016239 8 SAFTTLSTDITERILSLLPIPTLIRASSVCKSWRSIISA-PSFS 50 (392)
Q Consensus 8 ~~~~~Lp~dl~~~iL~rLP~~~l~~~~~v~k~W~~l~~~-~~f~ 50 (392)
..+..||+||+.+||++||++++.++..|||+|+.++.+ +..+
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w 56 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLW 56 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHH
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 357889999999999999999999999999999999987 5433
No 23
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.56 E-value=3.4e-08 Score=86.92 Aligned_cols=48 Identities=21% Similarity=0.465 Sum_probs=44.9
Q ss_pred CcccCCcHHHHHHHHhhCChhhHH-HhhccchhhhhhhcCcchhhHhhh
Q 016239 8 SAFTTLSTDITERILSLLPIPTLI-RASSVCKSWRSIISAPSFSALIAH 55 (392)
Q Consensus 8 ~~~~~Lp~dl~~~iL~rLP~~~l~-~~~~v~k~W~~l~~~~~f~~~~~~ 55 (392)
..+..||+||+.+||++||.++|+ ++++|||+|+.|+.+|.|++.+..
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~ 97 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQ 97 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHH
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhh
Confidence 578899999999999999999999 999999999999999999988654
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.13 E-value=0.0015 Score=59.00 Aligned_cols=223 Identities=11% Similarity=0.012 Sum_probs=123.0
Q ss_pred CCceeeeeCCCCceeeCC-----CCCCCCCcceEEeecceEEeecC----cceEecCCcCce-eecCCCCcCccCceEEE
Q 016239 77 NNQSFAFDPASNSWFHLP-----PAQEPRAGSCFIGANGFFFTTTP----RFGFSRILNTSW-HLTSPLRFSRINPLVGV 146 (392)
Q Consensus 77 ~~~~~~yd~~~~~W~~~~-----~~~~~r~~~~~~~~~g~i~v~gg----~~~ynp~~~~~W-~~~~~~~~~r~~~~~~~ 146 (392)
...+..+|+++++...-- ..+.......++..++.+|+... +.++|+. +.+- .+++....+ ..+++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~-t~~~~~~i~~~~~p---~~i~~ 91 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDIN-TFKEVGRITGFTSP---RYIHF 91 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETT-TCCEEEEEECCSSE---EEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECc-ccEEEEEcCCCCCC---cEEEE
Confidence 467889999988865321 11111222356667899998853 4789998 5554 344332222 23333
Q ss_pred EEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCE
Q 016239 147 FYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGR 226 (392)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ 226 (392)
.. ++++|+.... ...+.++|+.+++-...-+.... . +........+..+++
T Consensus 92 ~~----------------~g~lyv~~~~-----------~~~v~~iD~~t~~~~~~i~~g~~-~-~~~~~p~~i~~~~~~ 142 (328)
T 3dsm_A 92 LS----------------DEKAYVTQIW-----------DYRIFIINPKTYEITGYIECPDM-D-MESGSTEQMVQYGKY 142 (328)
T ss_dssp EE----------------TTEEEEEEBS-----------CSEEEEEETTTTEEEEEEECTTC-C-TTTCBCCCEEEETTE
T ss_pred eC----------------CCeEEEEECC-----------CCeEEEEECCCCeEEEEEEcCCc-c-ccCCCcceEEEECCE
Confidence 21 6699998632 12688999988764321111110 0 000001344457899
Q ss_pred EEEEee-cccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCC----CceeEEEeecCccceEeccc
Q 016239 227 FYVFGI-YSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRG----PSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 227 ly~~gg-~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~----~~~~v~~~d~~~~~W~~~~~ 301 (392)
+|+... ..+.|.++|+.+++....-...... ....+.-+|++|+......... ....|+++|+.+.+....-.
T Consensus 143 lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p--~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 143 VYVNCWSYQNRILKIDTETDKVVDELTIGIQP--TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp EEEEECTTCCEEEEEETTTTEEEEEEECSSCB--CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCCEEEEEECCCCeEEEEEEcCCCc--cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe
Confidence 999874 4679999999988754432221111 1222344789888763221110 02568888998876554333
Q ss_pred CCHHHHHhhcCCcccCccceeEEEEe--CCEEEEEeccccCCCCeEEEEeecCCCc
Q 016239 302 MPHDFLYSLVDTEEDDKFASLKCVGL--GNLIYVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 302 ~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
++.. .....++.. ++.+|+..+ .++.+|+++++
T Consensus 221 ~~~g-------------~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~ 255 (328)
T 3dsm_A 221 FKLG-------------DWPSEVQLNGTRDTLYWINN--------DIWRMPVEADR 255 (328)
T ss_dssp CCTT-------------CCCEEEEECTTSCEEEEESS--------SEEEEETTCSS
T ss_pred cCCC-------------CCceeEEEecCCCEEEEEcc--------EEEEEECCCCc
Confidence 3321 013344443 778888764 23445777766
No 25
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.80 E-value=0.0011 Score=56.66 Aligned_cols=157 Identities=14% Similarity=0.074 Sum_probs=95.6
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++.+|+..|.. ..+.+.++|+++++=..--+++.. ..+ .+.+..+++||++....+.+++||+++
T Consensus 30 ~~~LyestG~~---------g~S~v~~vD~~tgkv~~~~~l~~~-~fg-----eGi~~~~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 30 RGHLYESTGET---------GRSSVRKVDLETGRILQRAEVPPP-YFG-----AGIVAWRDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp TTEEEEEECCT---------TSCEEEEEETTTCCEEEEEECCTT-CCE-----EEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred CCEEEEECCCC---------CCceEEEEECCCCCEEEEEeCCCC-cce-----eEEEEeCCEEEEEEeeCCEEEEEECCc
Confidence 88999988862 234789999999876544445443 232 566778999999998889999999987
Q ss_pred CceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEe---cccCCHHHHHhhcCCcccCccce
Q 016239 245 HVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE---IAIMPHDFLYSLVDTEEDDKFAS 321 (392)
Q Consensus 245 ~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~---~~~~p~~~~~~~~~~~~~~~~~~ 321 (392)
.+-.. ..+... ....++.-+++||+..| +..|+.+|+++.+-.. +..-+..+ ..-
T Consensus 95 l~~~~--ti~~~~-~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~g~~~------------~~l 152 (243)
T 3mbr_X 95 LTPRA--RFRYPG-EGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAGGRPL------------DNL 152 (243)
T ss_dssp TEEEE--EEECSS-CCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEETTEEC------------CCE
T ss_pred CcEEE--EEeCCC-CceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccCCccc------------ccc
Confidence 65332 222111 23445555778888754 3457778998764221 11111111 012
Q ss_pred eEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeecC
Q 016239 322 LKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRLP 364 (392)
Q Consensus 322 ~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~~ 364 (392)
-.+...+++||+-... ...+..+|+++++... |-.++
T Consensus 153 NeLe~~~G~lyanvw~-----s~~I~vIDp~tG~V~~-~idl~ 189 (243)
T 3mbr_X 153 NELEWVNGELLANVWL-----TSRIARIDPASGKVVA-WIDLQ 189 (243)
T ss_dssp EEEEEETTEEEEEETT-----TTEEEEECTTTCBEEE-EEECG
T ss_pred eeeEEeCCEEEEEECC-----CCeEEEEECCCCCEEE-EEECC
Confidence 2344569999976531 1234556998887333 44433
No 26
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.62 E-value=0.004 Score=53.75 Aligned_cols=159 Identities=11% Similarity=-0.068 Sum_probs=93.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++.+|+..|.. ..+.+.++|+++++=..--+++.. ..+ .+.+..+++||+.....+.+++||+++
T Consensus 52 ~~~LyestG~~---------g~S~v~~vD~~Tgkv~~~~~l~~~-~Fg-----eGit~~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 52 NGYFYESTGLN---------GRSSIRKVDIESGKTLQQIELGKR-YFG-----EGISDWKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp TTEEEEEEEET---------TEEEEEEECTTTCCEEEEEECCTT-CCE-----EEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred CCEEEEECCCC---------CCceEEEEECCCCcEEEEEecCCc-cce-----eEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence 77999988862 234789999998875433344433 222 456678999999998889999999987
Q ss_pred Cceee-cccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeE
Q 016239 245 HVWSE-VQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLK 323 (392)
Q Consensus 245 ~~W~~-i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~ 323 (392)
.+-.. ++. +. ....++.-+++||+..| +..++.+|+.+.+-. .+++.....+.+ ..--.
T Consensus 117 ~~~~~ti~~-~~---eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~--~~I~V~~~g~~~-------~~lNE 176 (262)
T 3nol_A 117 LRQVRSFNY-DG---EGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPV--RTITVTAHGEEL-------PELNE 176 (262)
T ss_dssp CCEEEEEEC-SS---CCCCEEECSSCEEECCS-------SSEEEEECTTTCSEE--EEEECEETTEEC-------CCEEE
T ss_pred CcEEEEEEC-CC---CceEEecCCCEEEEECC-------CCeEEEEcCCCCeEE--EEEEeccCCccc-------cccce
Confidence 65332 322 11 22345555677787644 346778899876522 222111000000 00112
Q ss_pred EEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeecC
Q 016239 324 CVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRLP 364 (392)
Q Consensus 324 ~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~~ 364 (392)
+...+++||+-... .-.+..+|+++++... |-.++
T Consensus 177 Le~~~G~lyan~w~-----~~~I~vIDp~tG~V~~-~Id~~ 211 (262)
T 3nol_A 177 LEWVDGEIFANVWQ-----TNKIVRIDPETGKVTG-IIDLN 211 (262)
T ss_dssp EEEETTEEEEEETT-----SSEEEEECTTTCBEEE-EEECT
T ss_pred eEEECCEEEEEEcc-----CCeEEEEECCCCcEEE-EEECC
Confidence 44558999976531 1234556999887433 33443
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.54 E-value=0.049 Score=49.70 Aligned_cols=228 Identities=11% Similarity=0.120 Sum_probs=124.5
Q ss_pred CCCCCCEEEEEcccCCCCCCCceeeeeCCCCc--eeeCCCCC-------CCCCcceEEeecceEEeecC---cceEecCC
Q 016239 58 NASPRPWFFLFGLHNTSSRNNQSFAFDPASNS--WFHLPPAQ-------EPRAGSCFIGANGFFFTTTP---RFGFSRIL 125 (392)
Q Consensus 58 ~~~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~--W~~~~~~~-------~~r~~~~~~~~~g~i~v~gg---~~~ynp~~ 125 (392)
+...++.+|+.... ..+.+||+++++ |..-.... ........+..++.||+... ++.+|+.
T Consensus 49 p~v~~~~v~~~~~~------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~- 121 (376)
T 3q7m_A 49 PALADNVVYAADRA------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTS- 121 (376)
T ss_dssp CEEETTEEEEECTT------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETT-
T ss_pred cEEECCEEEEEcCC------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECC-
Confidence 34456777776431 468899987665 65432111 11112234556889998743 5889987
Q ss_pred cC--ceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCC--eec
Q 016239 126 NT--SWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDS--WEL 201 (392)
Q Consensus 126 ~~--~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~ 201 (392)
++ .|+.-.+-. .....++. ++.+|+.... ..+..+|..+++ |+.
T Consensus 122 tG~~~W~~~~~~~---~~~~p~~~-----------------~~~v~v~~~~------------g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 122 DGTVAWQTKVAGE---ALSRPVVS-----------------DGLVLIHTSN------------GQLQALNEADGAVKWTV 169 (376)
T ss_dssp TCCEEEEEECSSC---CCSCCEEE-----------------TTEEEEECTT------------SEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCCCc---eEcCCEEE-----------------CCEEEEEcCC------------CeEEEEECCCCcEEEEE
Confidence 45 576432211 11222344 7777775432 158889987765 876
Q ss_pred CCCCCC-CCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCC--ceeecccCCCCc-------ccceeEEeeCCeEE
Q 016239 202 CPPLPA-DFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKH--VWSEVQTLRPPG-------VMFSFLIASPNMLV 271 (392)
Q Consensus 202 ~~~~~~-~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~--~W~~i~~~~~~~-------~~~~~~~~~~g~l~ 271 (392)
-...+. ..+.. ...+..++.+|+ |...+.+.+||+.++ .|+.-...+... ......+..++.||
T Consensus 170 ~~~~~~~~~~~~-----~~~~~~~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~ 243 (376)
T 3q7m_A 170 NLDMPSLSLRGE-----SAPTTAFGAAVV-GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVF 243 (376)
T ss_dssp ECCC-----CCC-----CCCEEETTEEEE-CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEE
T ss_pred eCCCCceeecCC-----CCcEEECCEEEE-EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEE
Confidence 543221 11111 345566788776 445678999999766 566532222100 01122345688888
Q ss_pred EEEeecCCCCCceeEEEeecCcc--ceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEe
Q 016239 272 LAGMCNAPRGPSFNLWKVDELSM--EFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEI 349 (392)
Q Consensus 272 v~gg~~~~~~~~~~v~~~d~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~ 349 (392)
+.+. ...++.+|..+. .|+.-. + .....+..++.||+... .+. ++-+
T Consensus 244 ~~~~-------~g~l~~~d~~tG~~~w~~~~--~----------------~~~~~~~~~~~l~~~~~--~g~----l~~~ 292 (376)
T 3q7m_A 244 ALAY-------NGNLTALDLRSGQIMWKREL--G----------------SVNDFIVDGNRIYLVDQ--NDR----VMAL 292 (376)
T ss_dssp EECT-------TSCEEEEETTTCCEEEEECC--C----------------CEEEEEEETTEEEEEET--TCC----EEEE
T ss_pred EEec-------CcEEEEEECCCCcEEeeccC--C----------------CCCCceEECCEEEEEcC--CCe----EEEE
Confidence 7652 234666787554 476421 1 12345667999999863 111 2344
Q ss_pred ecCCCccceeeeec
Q 016239 350 GTESDKCRCSWRRL 363 (392)
Q Consensus 350 d~~~~~~~~~W~~~ 363 (392)
|+.+++ ..|+.-
T Consensus 293 d~~tG~--~~w~~~ 304 (376)
T 3q7m_A 293 TIDGGV--TLWTQS 304 (376)
T ss_dssp ETTTCC--EEEEEC
T ss_pred ECCCCc--EEEeec
Confidence 777765 558763
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.53 E-value=0.0023 Score=55.25 Aligned_cols=189 Identities=7% Similarity=-0.087 Sum_probs=103.2
Q ss_pred eEEeecceEEeecCc------ceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeec
Q 016239 104 CFIGANGFFFTTTPR------FGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFI 177 (392)
Q Consensus 104 ~~~~~~g~i~v~gg~------~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~ 177 (392)
++...++.+|+.+|. .++|+. +++-...-+++..-...+++.. ++++|+....
T Consensus 47 GL~~~~~~LyestG~~g~S~v~~vD~~-Tgkv~~~~~l~~~~FgeGit~~-----------------g~~ly~ltw~--- 105 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNGRSSIRKVDIE-SGKTLQQIELGKRYFGEGISDW-----------------KDKIVGLTWK--- 105 (262)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTT-TCCEEEEEECCTTCCEEEEEEE-----------------TTEEEEEESS---
T ss_pred eEEEECCEEEEECCCCCCceEEEEECC-CCcEEEEEecCCccceeEEEEe-----------------CCEEEEEEee---
Confidence 566668899998763 688998 5654333334333233446666 8899999643
Q ss_pred CcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCCce-eecccCCC-
Q 016239 178 GGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVW-SEVQTLRP- 255 (392)
Q Consensus 178 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W-~~i~~~~~- 255 (392)
...+.+||+.+.+= +..++.+ ..+ .+.+.-++.||+..| ++.|..+|+++.+- ..+.....
T Consensus 106 --------~~~v~v~D~~t~~~--~~ti~~~-~eG-----~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 106 --------NGLGFVWNIRNLRQ--VRSFNYD-GEG-----WGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp --------SSEEEEEETTTCCE--EEEEECS-SCC-----CCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETT
T ss_pred --------CCEEEEEECccCcE--EEEEECC-CCc-----eEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCC
Confidence 23799999877553 2222222 122 344445667888877 67899999988643 22322111
Q ss_pred Ccccc-eeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEE--eCCEEE
Q 016239 256 PGVMF-SFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVG--LGNLIY 332 (392)
Q Consensus 256 ~~~~~-~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~ 332 (392)
..... .-+...+|+||+--.. +..|.+.|+.+.+=...-.++..... . ....+..-...+++. .++++|
T Consensus 169 ~~~~~lNELe~~~G~lyan~w~------~~~I~vIDp~tG~V~~~Id~~~L~~~-~-~~~~~~~~vlNGIA~dp~~~~lf 240 (262)
T 3nol_A 169 EELPELNELEWVDGEIFANVWQ------TNKIVRIDPETGKVTGIIDLNGILAE-A-GPLPSPIDVLNGIAWDKEHHRLF 240 (262)
T ss_dssp EECCCEEEEEEETTEEEEEETT------SSEEEEECTTTCBEEEEEECTTGGGG-S-CSCCSSCCCEEEEEEETTTTEEE
T ss_pred ccccccceeEEECCEEEEEEcc------CCeEEEEECCCCcEEEEEECCcCccc-c-ccccCcCCceEEEEEcCCCCEEE
Confidence 01010 1133448999964421 34777889988764333222211100 0 000000001233333 468999
Q ss_pred EEeccc
Q 016239 333 VFNEEY 338 (392)
Q Consensus 333 v~gg~~ 338 (392)
|.|..+
T Consensus 241 VTGK~W 246 (262)
T 3nol_A 241 VTGKLW 246 (262)
T ss_dssp EEETTC
T ss_pred EECCCC
Confidence 999654
No 29
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.49 E-value=4.1e-05 Score=66.66 Aligned_cols=47 Identities=26% Similarity=0.357 Sum_probs=43.4
Q ss_pred CcccCCcHHHHHHHHhhCChhhHHHhhccchhhhhhhcCcchhhHhh
Q 016239 8 SAFTTLSTDITERILSLLPIPTLIRASSVCKSWRSIISAPSFSALIA 54 (392)
Q Consensus 8 ~~~~~Lp~dl~~~iL~rLP~~~l~~~~~v~k~W~~l~~~~~f~~~~~ 54 (392)
..+..||+|++..||+.|+++++.++..|||+|+.++.++..++.+.
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l 49 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFL 49 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHH
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 46889999999999999999999999999999999999998887754
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.42 E-value=0.016 Score=52.02 Aligned_cols=152 Identities=7% Similarity=-0.029 Sum_probs=85.8
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCe-ecCCCCCCCCCCCCCccceeeEE-ECCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSW-ELCPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~i~~yd~ 242 (392)
++++|+.... ...+.++|..+.+- ..++....+ ...+. -++++|+.....+.|.++|+
T Consensus 53 ~~~lyv~~~~-----------~~~v~viD~~t~~~~~~i~~~~~p---------~~i~~~~~g~lyv~~~~~~~v~~iD~ 112 (328)
T 3dsm_A 53 DGIGWIVVNN-----------SHVIFAIDINTFKEVGRITGFTSP---------RYIHFLSDEKAYVTQIWDYRIFIINP 112 (328)
T ss_dssp TTEEEEEEGG-----------GTEEEEEETTTCCEEEEEECCSSE---------EEEEEEETTEEEEEEBSCSEEEEEET
T ss_pred CCEEEEEEcC-----------CCEEEEEECcccEEEEEcCCCCCC---------cEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 8899998653 22689999987765 334322222 34444 68899999866789999999
Q ss_pred CCCceee-cccCCC--CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCcc
Q 016239 243 KKHVWSE-VQTLRP--PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKF 319 (392)
Q Consensus 243 ~~~~W~~-i~~~~~--~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~ 319 (392)
.+.+-.. ++.... .......++..+++||+..... ...|.++|+.+.+....-.....
T Consensus 113 ~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~-----~~~v~viD~~t~~~~~~i~~g~~-------------- 173 (328)
T 3dsm_A 113 KTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSY-----QNRILKIDTETDKVVDELTIGIQ-------------- 173 (328)
T ss_dssp TTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTT-----CCEEEEEETTTTEEEEEEECSSC--------------
T ss_pred CCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCC-----CCEEEEEECCCCeEEEEEEcCCC--------------
Confidence 9886543 322110 0001223444789999885310 23566779887764432221111
Q ss_pred ceeEEEEeCCEEEEEeccccCCC-----CeEEEEeecCCCc
Q 016239 320 ASLKCVGLGNLIYVFNEEYHKKY-----PACVCEIGTESDK 355 (392)
Q Consensus 320 ~~~~~~~~~~~i~v~gg~~~~~~-----~~~~~~~d~~~~~ 355 (392)
-...++..++++|+......... ...++.+|+++++
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~ 214 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT 214 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe
Confidence 01222345678888763221110 1334555888777
No 31
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.35 E-value=0.028 Score=51.39 Aligned_cols=198 Identities=10% Similarity=0.043 Sum_probs=104.0
Q ss_pred eEEeecceEEeecC---cceEecCCcC--ceeecCCCC-------cCccCceEEEEEcCCCCcccccCCcccCCCeEEEE
Q 016239 104 CFIGANGFFFTTTP---RFGFSRILNT--SWHLTSPLR-------FSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVV 171 (392)
Q Consensus 104 ~~~~~~g~i~v~gg---~~~ynp~~~~--~W~~~~~~~-------~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~ 171 (392)
..+..++.||+... ++.+|+. ++ .|+.-.... ........++. ++.+|+.
T Consensus 48 ~p~v~~~~v~~~~~~g~v~a~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~v~ 109 (376)
T 3q7m_A 48 HPALADNVVYAADRAGLVKALNAD-DGKEIWSVSLAEKDGWFSKEPALLSGGVTVS-----------------GGHVYIG 109 (376)
T ss_dssp CCEEETTEEEEECTTSEEEEEETT-TCCEEEEEECCC---CCSCCCCCEEEEEEEE-----------------TTEEEEE
T ss_pred ccEEECCEEEEEcCCCeEEEEEcc-CCceeeeecCccccccccccCcccccCceEe-----------------CCEEEEE
Confidence 34566899998753 5789987 44 676433211 11111222333 7788886
Q ss_pred eceeecCcccccccceEEEEEeCCCCC--eecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCC--ce
Q 016239 172 GGVRFIGGLVDIEDRLAVEIYDPHSDS--WELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKH--VW 247 (392)
Q Consensus 172 gG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~--~W 247 (392)
... ..+..+|..+++ |+.-..-.. . ...+..++.+|+.. ..+.|.+||..++ .|
T Consensus 110 ~~~------------g~l~a~d~~tG~~~W~~~~~~~~--~-------~~p~~~~~~v~v~~-~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 110 SEK------------AQVYALNTSDGTVAWQTKVAGEA--L-------SRPVVSDGLVLIHT-SNGQLQALNEADGAVKW 167 (376)
T ss_dssp ETT------------SEEEEEETTTCCEEEEEECSSCC--C-------SCCEEETTEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred cCC------------CEEEEEECCCCCEEEEEeCCCce--E-------cCCEEECCEEEEEc-CCCeEEEEECCCCcEEE
Confidence 432 258899987765 765432111 1 34456688888754 4568999999776 47
Q ss_pred eecccCCC-CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc--ceEecccCCHHH--HHhhcCCcccCcccee
Q 016239 248 SEVQTLRP-PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM--EFSEIAIMPHDF--LYSLVDTEEDDKFASL 322 (392)
Q Consensus 248 ~~i~~~~~-~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~--~W~~~~~~p~~~--~~~~~~~~~~~~~~~~ 322 (392)
+.-...+. ........+..++.||+... ...++.+|..+. .|+.-...|... ...+.+ ...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~v~~g~~-------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~-------~~~ 233 (376)
T 3q7m_A 168 TVNLDMPSLSLRGESAPTTAFGAAVVGGD-------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSD-------VDT 233 (376)
T ss_dssp EEECCC-----CCCCCCEEETTEEEECCT-------TTEEEEEETTTCCEEEEEECCC-----------C-------CCC
T ss_pred EEeCCCCceeecCCCCcEEECCEEEEEcC-------CCEEEEEECCCCcEEEEEecccCCCCcccccccc-------cCC
Confidence 66433222 11112233455777766321 235666776544 477543333211 000000 123
Q ss_pred EEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeec
Q 016239 323 KCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 323 ~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
..+..++.+|+.+. .+. ++-+|+++++ ..|+.-
T Consensus 234 ~p~~~~~~v~~~~~--~g~----l~~~d~~tG~--~~w~~~ 266 (376)
T 3q7m_A 234 TPVVVNGVVFALAY--NGN----LTALDLRSGQ--IMWKRE 266 (376)
T ss_dssp CCEEETTEEEEECT--TSC----EEEEETTTCC--EEEEEC
T ss_pred CcEEECCEEEEEec--CcE----EEEEECCCCc--EEeecc
Confidence 34467889988762 121 2344777665 458764
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.34 E-value=0.017 Score=49.40 Aligned_cols=147 Identities=8% Similarity=0.004 Sum_probs=91.1
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEeecceEEeecC----cceEecCCcCceeecCCCCc
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGANGFFFTTTP----RFGFSRILNTSWHLTSPLRF 137 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g~i~v~gg----~~~ynp~~~~~W~~~~~~~~ 137 (392)
++.+|.-.|..+. +.+..+|+++++-..--+++......+++..++.||+... .++||+. +.+- +...+.
T Consensus 30 ~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~-tl~~--~~ti~~ 103 (243)
T 3mbr_X 30 RGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA-TLTP--RARFRY 103 (243)
T ss_dssp TTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-TTEE--EEEEEC
T ss_pred CCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC-cCcE--EEEEeC
Confidence 4677777665432 5688999999886554444444444567777999999863 3899987 4432 222222
Q ss_pred CccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCee-cCC--CCCCCCCCCCC
Q 016239 138 SRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWE-LCP--PLPADFRSGYS 214 (392)
Q Consensus 138 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~-~~~--~~~~~~~~~~~ 214 (392)
+....+++.- ++++|+.-|. ..+.++|+++.+-. .+. .-+.+.+.
T Consensus 104 ~~~Gwglt~d-----------------g~~L~vSdgs------------~~l~~iDp~t~~~~~~I~V~~~g~~~~~--- 151 (243)
T 3mbr_X 104 PGEGWALTSD-----------------DSHLYMSDGT------------AVIRKLDPDTLQQVGSIKVTAGGRPLDN--- 151 (243)
T ss_dssp SSCCCEEEEC-----------------SSCEEEECSS------------SEEEEECTTTCCEEEEEECEETTEECCC---
T ss_pred CCCceEEeeC-----------------CCEEEEECCC------------CeEEEEeCCCCeEEEEEEEccCCccccc---
Confidence 3233444433 7788888553 26889999886532 221 11111111
Q ss_pred ccceeeEEECCEEEEEeecccEEEEEECCCCcee
Q 016239 215 SQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVWS 248 (392)
Q Consensus 215 ~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W~ 248 (392)
.......+|+||+---.++.|.+.|+++++=.
T Consensus 152 --lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 152 --LNELEWVNGELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp --EEEEEEETTEEEEEETTTTEEEEECTTTCBEE
T ss_pred --ceeeEEeCCEEEEEECCCCeEEEEECCCCCEE
Confidence 12344569999977766789999999998543
No 33
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.29 E-value=0.027 Score=48.67 Aligned_cols=189 Identities=8% Similarity=-0.054 Sum_probs=103.4
Q ss_pred eEEeecceEEeecCc----ceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCc
Q 016239 104 CFIGANGFFFTTTPR----FGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGG 179 (392)
Q Consensus 104 ~~~~~~g~i~v~gg~----~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~ 179 (392)
++...++.||+..|. .++|+. +++-...- ++..-...+++.. +++||+....
T Consensus 59 GL~~~~~~Ly~stG~~g~v~~iD~~-Tgkv~~~~-l~~~~FgeGit~~-----------------g~~Ly~ltw~----- 114 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQGTLRQLSLE-SAQPVWME-RLGNIFAEGLASD-----------------GERLYQLTWT----- 114 (268)
T ss_dssp EEEEETTEEEEEETTTTEEEECCSS-CSSCSEEE-ECTTCCEEEEEEC-----------------SSCEEEEESS-----
T ss_pred eEEEECCEEEEEcCCCCEEEEEECC-CCcEEeEE-CCCCcceeEEEEe-----------------CCEEEEEEcc-----
Confidence 666678999999875 678988 55433222 4433233345555 8899998543
Q ss_pred ccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCCceee-cccCC-CCc
Q 016239 180 LVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVWSE-VQTLR-PPG 257 (392)
Q Consensus 180 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W~~-i~~~~-~~~ 257 (392)
...+.+||..+.+=. ..++.+ ..+ .+.+..++.||+..| ++.|..+|+++.+-.. +.... +..
T Consensus 115 ------~~~v~V~D~~Tl~~~--~ti~~~-~eG-----wGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 115 ------EGLLFTWSGMPPQRE--RTTRYS-GEG-----WGLCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQP 179 (268)
T ss_dssp ------SCEEEEEETTTTEEE--EEEECS-SCC-----CCEEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEE
T ss_pred ------CCEEEEEECCcCcEE--EEEeCC-Cce-----eEEecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 237999998765432 222222 112 455566788999887 7899999998864322 22211 101
Q ss_pred c-cceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEe--CCEEEEE
Q 016239 258 V-MFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGL--GNLIYVF 334 (392)
Q Consensus 258 ~-~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~ 334 (392)
. ...-+...+|+||+--. . +..|.+.|+.+.+=...-.+.......-.... +..-..-+++.. ++++||.
T Consensus 180 v~~lNeLe~~dG~lyanvw-~-----s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~-~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 180 VELINELECANGVIYANIW-H-----SSDVLEIDPATGTVVGVIDASALTRAVAGQVT-NPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp CCCEEEEEEETTEEEEEET-T-----CSEEEEECTTTCBEEEEEECHHHHHHHTTTCC-CTTCCEEEEEECTTTCCEEEE
T ss_pred cccccccEEeCCEEEEEEC-C-----CCeEEEEeCCCCcEEEEEECCCCccccccccc-CcCCceEEEEEcCCCCEEEEe
Confidence 1 11123344899995432 1 34777889988764333333221110000000 000012334433 6899999
Q ss_pred eccc
Q 016239 335 NEEY 338 (392)
Q Consensus 335 gg~~ 338 (392)
|..+
T Consensus 253 GK~W 256 (268)
T 3nok_A 253 GKLW 256 (268)
T ss_dssp ETTC
T ss_pred CCCC
Confidence 9644
No 34
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.21 E-value=0.018 Score=51.38 Aligned_cols=154 Identities=12% Similarity=0.069 Sum_probs=76.7
Q ss_pred EEEEEeCCC-CCeecCC--CCCCCCCCCCCccceeeEEE--CC-EEEEEeecccEEEEEECC--CCceeec---ccCCCC
Q 016239 188 AVEIYDPHS-DSWELCP--PLPADFRSGYSSQYLSSALF--RG-RFYVFGIYSFSVSSFDLK--KHVWSEV---QTLRPP 256 (392)
Q Consensus 188 ~~~~yd~~~-~~W~~~~--~~~~~~~~~~~~~~~~~~~~--~g-~ly~~gg~~~~i~~yd~~--~~~W~~i---~~~~~~ 256 (392)
.+.+||..+ ++...+. ......... ...+.+ +| .+|+.+...+.|..||.. +.++..+ ...+..
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGAG-----PRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTCC-----EEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred EEEEEEecCCCceeeecccccccCCCCC-----cceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 588888876 6554322 111100111 222333 44 477777667889999984 3444332 222221
Q ss_pred ---cccceeEEe-eCC-eEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEE
Q 016239 257 ---GVMFSFLIA-SPN-MLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLI 331 (392)
Q Consensus 257 ---~~~~~~~~~-~~g-~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i 331 (392)
......+.. -+| .||+.+... ..+.+|.++..+.+++.+..++.... -...++...+..|
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~----~~i~v~d~~~~~~~~~~~~~~~~~~~-----------~~~~~~s~dg~~l 291 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTA----SLITVFSVSEDGSVLSKEGFQPTETQ-----------PRGFNVDHSGKYL 291 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTT----TEEEEEEECTTSCCEEEEEEEECSSS-----------CCCEEECTTSSEE
T ss_pred ccccCCccceEECCCCCEEEEEecCC----CEEEEEEEcCCCCceEEeeeecCCCc-----------cceEEECCCCCEE
Confidence 111112222 245 455544221 15777766544566666655443210 0122222234556
Q ss_pred EEEeccccCCCCeEEEEeecCCCccceeeeecCCCCC
Q 016239 332 YVFNEEYHKKYPACVCEIGTESDKCRCSWRRLPQLPS 368 (392)
Q Consensus 332 ~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~p~ 368 (392)
|+.+. ....+.++++|+++++ ++.+..++.
T Consensus 292 ~~~~~---~~~~v~v~~~d~~~g~----~~~~~~~~~ 321 (343)
T 1ri6_A 292 IAAGQ---KSHHISVYEIVGEQGL----LHEKGRYAV 321 (343)
T ss_dssp EEECT---TTCEEEEEEEETTTTE----EEEEEEEEC
T ss_pred EEecC---CCCeEEEEEEcCCCce----eeEcccccc
Confidence 66653 2355666777888888 877776655
No 35
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.19 E-value=0.0073 Score=52.21 Aligned_cols=151 Identities=11% Similarity=-0.115 Sum_probs=89.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++.+|+..|.. ..+.++|+++++=..-- ++.. ..+ .+.+..+++||+.....+.+++||+++
T Consensus 64 ~~~Ly~stG~~-----------g~v~~iD~~Tgkv~~~~-l~~~-~Fg-----eGit~~g~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 64 QGHFFESTGHQ-----------GTLRQLSLESAQPVWME-RLGN-IFA-----EGLASDGERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp TTEEEEEETTT-----------TEEEECCSSCSSCSEEE-ECTT-CCE-----EEEEECSSCEEEEESSSCEEEEEETTT
T ss_pred CCEEEEEcCCC-----------CEEEEEECCCCcEEeEE-CCCC-cce-----eEEEEeCCEEEEEEccCCEEEEEECCc
Confidence 88999998861 13889999887643322 4332 222 446667889999998889999999987
Q ss_pred Cceee-cccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeE
Q 016239 245 HVWSE-VQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLK 323 (392)
Q Consensus 245 ~~W~~-i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~ 323 (392)
.+-.. ++. ++ ....++.-+++||+..| +..++.+|+++.+-. .+++........ ..--.
T Consensus 126 l~~~~ti~~-~~---eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~--~~I~V~~~g~~v-------~~lNe 185 (268)
T 3nok_A 126 PQRERTTRY-SG---EGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALV--GAVQVKLRGQPV-------ELINE 185 (268)
T ss_dssp TEEEEEEEC-SS---CCCCEEEETTEEEEECS-------SSEEEEECTTTCCEE--EEEECEETTEEC-------CCEEE
T ss_pred CcEEEEEeC-CC---ceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEE--EEEEeCCCCccc-------ccccc
Confidence 65432 332 22 22345566778888754 346777798876422 222211000000 01123
Q ss_pred EEEeCCEEEEEeccccCCCCeEEEEeecCCCccce
Q 016239 324 CVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRC 358 (392)
Q Consensus 324 ~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~ 358 (392)
+...+++||+-.. . .-.+..+|+++++...
T Consensus 186 Le~~dG~lyanvw--~---s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 186 LECANGVIYANIW--H---SSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEEETTEEEEEET--T---CSEEEEECTTTCBEEE
T ss_pred cEEeCCEEEEEEC--C---CCeEEEEeCCCCcEEE
Confidence 3455889996553 1 1234556998887433
No 36
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.17 E-value=0.0002 Score=64.98 Aligned_cols=46 Identities=30% Similarity=0.544 Sum_probs=39.5
Q ss_pred CCCCcccCCcHHHHHHHHhhCChhhHHHhhccchhhhhhhcCcchh
Q 016239 5 NPYSAFTTLSTDITERILSLLPIPTLIRASSVCKSWRSIISAPSFS 50 (392)
Q Consensus 5 ~~~~~~~~Lp~dl~~~iL~rLP~~~l~~~~~v~k~W~~l~~~~~f~ 50 (392)
.|...|..||+|++.+|+.+|+.+++.++..|||+|+.+..+|..+
T Consensus 4 ~~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 4 FPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp ---CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred cccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 3456899999999999999999999999999999999998776543
No 37
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.16 E-value=0.0085 Score=54.02 Aligned_cols=191 Identities=9% Similarity=0.027 Sum_probs=90.6
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec------CcceEecCCcCceeecCCCCcCccCceEEEEEcC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT------PRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDH 150 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g------g~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~ 150 (392)
..++.+|..++++..+...........++.. +|.+|+.+ .+++||.. +++++.+..............+..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~-~g~~~~~~~~~~~~~~p~~~a~sp- 95 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQID-GQTAHKLNTVVAPGTPPAYVAVDE- 95 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEE-TTEEEEEEEEEEESCCCSEEEEET-
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEec-CCcEEEeeeeecCCCCCEEEEECC-
Confidence 3467788888777654322111111223333 66677764 24788886 566665544222111222222211
Q ss_pred CCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCC-CCCeecCCCCCCC-----CCCCCCccceeeEEE-
Q 016239 151 DRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPH-SDSWELCPPLPAD-----FRSGYSSQYLSSALF- 223 (392)
Q Consensus 151 ~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~-----~~~~~~~~~~~~~~~- 223 (392)
++..+|+.+.. ...+.+||.. +++.+.+...... .+.. ......+.+
T Consensus 96 -------------dg~~l~~~~~~-----------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~s 149 (347)
T 3hfq_A 96 -------------ARQLVYSANYH-----------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQD--GSHIHYTDLT 149 (347)
T ss_dssp -------------TTTEEEEEETT-----------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCS--SCCEEEEEEC
T ss_pred -------------CCCEEEEEeCC-----------CCEEEEEEeCCCCCeeecceeecCCCCCCcccc--CCCceEEEEC
Confidence 14456666522 1146666653 3333332211100 0110 001222333
Q ss_pred -CCEEEEEeecccEEEEEECC-CCceeecccC--CCCcccceeEEeeCCe-EEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 224 -RGRFYVFGIYSFSVSSFDLK-KHVWSEVQTL--RPPGVMFSFLIASPNM-LVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 224 -~g~ly~~gg~~~~i~~yd~~-~~~W~~i~~~--~~~~~~~~~~~~~~g~-l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
+|++|+.+...+.|..||+. +++...+... +....-......-+|+ ||+.+... ..+.+|.++..+.+++.
T Consensus 150 pdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~----~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 150 PDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS----SQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp TTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----TEEEEEEEETTTTEEEE
T ss_pred CCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC----CEEEEEEecCCCCceEE
Confidence 67788777666789999987 5555543221 1111111222334666 66655322 26788877765566554
Q ss_pred cc
Q 016239 299 IA 300 (392)
Q Consensus 299 ~~ 300 (392)
+.
T Consensus 226 ~~ 227 (347)
T 3hfq_A 226 LG 227 (347)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 38
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.01 E-value=0.072 Score=46.25 Aligned_cols=153 Identities=10% Similarity=0.014 Sum_probs=86.4
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++.+|+..|. .....+.++|+.+++=...-+++.. ..+ .+.+..++.||+..-..+.+.+||+.+
T Consensus 31 dg~Lyvstg~---------~~~s~v~~iD~~tg~v~~~i~l~~~-~fg-----eGi~~~g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 31 NDTLFESTGL---------YGRSSVRQVALQTGKVENIHKMDDS-YFG-----EGLTLLNEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp TTEEEEEECS---------TTTCEEEEEETTTCCEEEEEECCTT-CCE-----EEEEEETTEEEEEETTCSEEEEEETTT
T ss_pred CCeEEEECCC---------CCCCEEEEEECCCCCEEEEEecCCC-cce-----EEEEEeCCEEEEEEecCCEEEEEECCC
Confidence 3799998663 1234799999998874433223332 121 455667889999998889999999987
Q ss_pred Cce-eecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeE
Q 016239 245 HVW-SEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLK 323 (392)
Q Consensus 245 ~~W-~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~ 323 (392)
.+= ..++...+ . ...+..-+++||+..+ +..++.+|+.+.+ .+..++.....+.. .....
T Consensus 96 ~~v~~~i~~g~~--~-g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~--v~~~I~Vg~~~~p~-------~~~ne 156 (266)
T 2iwa_A 96 LSNIKNFTHQMK--D-GWGLATDGKILYGSDG-------TSILYEIDPHTFK--LIKKHNVKYNGHRV-------IRLNE 156 (266)
T ss_dssp TEEEEEEECCSS--S-CCEEEECSSSEEEECS-------SSEEEEECTTTCC--EEEEEECEETTEEC-------CCEEE
T ss_pred CcEEEEEECCCC--C-eEEEEECCCEEEEECC-------CCeEEEEECCCCc--EEEEEEECCCCccc-------cccee
Confidence 642 22322201 1 2334445677887542 3467778987754 22222211000000 01224
Q ss_pred EEEeCCEEEEEeccccCCCCeEEEEeecCCCcc
Q 016239 324 CVGLGNLIYVFNEEYHKKYPACVCEIGTESDKC 356 (392)
Q Consensus 324 ~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~ 356 (392)
+...+++||+-... .-.+..+|+.+++.
T Consensus 157 le~~dg~lyvn~~~-----~~~V~vID~~tg~V 184 (266)
T 2iwa_A 157 LEYINGEVWANIWQ-----TDCIARISAKDGTL 184 (266)
T ss_dssp EEEETTEEEEEETT-----SSEEEEEETTTCCE
T ss_pred EEEECCEEEEecCC-----CCeEEEEECCCCcE
Confidence 44458899977642 11334558888763
No 39
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.99 E-value=0.089 Score=45.12 Aligned_cols=173 Identities=10% Similarity=-0.059 Sum_probs=84.5
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec---CcceEecCCcCceeecCCCCcCccCceEEEEEcCCCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT---PRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRG 153 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g---g~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~ 153 (392)
..+..||+.+.......... .....+++.. +|.+|+.. ++.+||+. ++....+..... .......+ +.
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~-~~~~~~~~~~~~--~~p~~i~~-~~--- 117 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAG-SNNQTVLPFDGL--NYPEGLAV-DT--- 117 (270)
T ss_dssp CEEEEECC-----EECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTT-CSCCEECCCCSC--SSEEEEEE-CT---
T ss_pred CcEEEecCCCcccceEeeCC-cCCcceeEECCCCCEEEEcCCCEEEEEeCC-CceEeeeecCCc--CCCcceEE-CC---
Confidence 45778888766544332211 1112244444 67788874 35788987 444333321110 11112222 22
Q ss_pred cccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-CCEEEEEee
Q 016239 154 HCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-RGRFYVFGI 232 (392)
Q Consensus 154 ~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~g~ly~~gg 232 (392)
++++|+.... ...+.+++..+........... ... ...+.. +|.+|+...
T Consensus 118 -----------~g~l~v~~~~-----------~~~i~~~~~~~~~~~~~~~~~~--~~p-----~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 118 -----------QGAVYVADRG-----------NNRVVKLAAGSKTQTVLPFTGL--NDP-----DGVAVDNSGNVYVTDT 168 (270)
T ss_dssp -----------TCCEEEEEGG-----------GTEEEEECTTCCSCEECCCCSC--CSC-----CCEEECTTCCEEEEEG
T ss_pred -----------CCCEEEEECC-----------CCEEEEEECCCceeEeeccccC--CCc-----eeEEEeCCCCEEEEEC
Confidence 5678887432 1257778766654433221111 110 223332 578998877
Q ss_pred cccEEEEEECCCCceeecccCCCCcccceeEEe-eCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 233 YSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 233 ~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
..+.|..||+....-........ .....++. -+|.||+.... ...|+++|+.+..
T Consensus 169 ~~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~g~l~v~~~~------~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 169 DNNRVVKLEAESNNQVVLPFTDI--TAPWGIAVDEAGTVYVTEHN------TNQVVKLLAGSTT 224 (270)
T ss_dssp GGTEEEEECTTTCCEEECCCSSC--CSEEEEEECTTCCEEEEETT------TSCEEEECTTCSC
T ss_pred CCCEEEEEecCCCceEeecccCC--CCceEEEECCCCCEEEEECC------CCcEEEEcCCCCc
Confidence 67799999998765433221111 11222333 36788887632 2346666876654
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.96 E-value=0.098 Score=45.43 Aligned_cols=198 Identities=9% Similarity=-0.068 Sum_probs=98.6
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec----CcceEecCCcCceeecCCCCcCccCceEEEEEcCCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT----PRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDR 152 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g----g~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 152 (392)
..+..||+. ++...............++.. +|.+|+.. +++++|+. ++........... ....... +.
T Consensus 78 ~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~--g~~~~~~~~~~~~-~~~~i~~-~~-- 150 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD--GKIREYELPNKGS-YPSFITL-GS-- 150 (299)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--CCEEEEECSSTTC-CEEEEEE-CT--
T ss_pred CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC--CCEEEecCCCCCC-CCceEEE-cC--
Confidence 357788876 444333211111222344444 67888864 25788883 3433321111111 1111222 22
Q ss_pred CcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEE
Q 016239 153 GHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVF 230 (392)
Q Consensus 153 ~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~ 230 (392)
++++|+.... ...+.+||+ +++..... .+..... .....+ +|.+|+.
T Consensus 151 ------------~g~l~v~~~~-----------~~~i~~~~~-~g~~~~~~-~~~~~~~------~~~i~~~~~g~l~v~ 199 (299)
T 2z2n_A 151 ------------DNALWFTENQ-----------NNAIGRITE-SGDITEFK-IPTPASG------PVGITKGNDDALWFV 199 (299)
T ss_dssp ------------TSCEEEEETT-----------TTEEEEECT-TCCEEEEE-CSSTTCC------EEEEEECTTSSEEEE
T ss_pred ------------CCCEEEEeCC-----------CCEEEEEcC-CCcEEEee-CCCCCCc------ceeEEECCCCCEEEE
Confidence 5688886421 125888888 77666531 1111011 223333 5789888
Q ss_pred eecccEEEEEECCCCceeecccCCCCcccceeEEe-eCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHh
Q 016239 231 GIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYS 309 (392)
Q Consensus 231 gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~ 309 (392)
....+.|..||+ +++...+..... ......++. -+|+||+.... ...|+++|+. .+...+. ++...
T Consensus 200 ~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~~-g~~~~~~-~~~~~--- 266 (299)
T 2z2n_A 200 EIIGNKIGRITT-SGEITEFKIPTP-NARPHAITAGAGIDLWFTEWG------ANKIGRLTSN-NIIEEYP-IQIKS--- 266 (299)
T ss_dssp ETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECSTTCEEEEETT------TTEEEEEETT-TEEEEEE-CSSSS---
T ss_pred ccCCceEEEECC-CCcEEEEECCCC-CCCceeEEECCCCCEEEeccC------CceEEEECCC-CceEEEe-CCCCC---
Confidence 766678999999 777665432211 111222333 36788886521 2356677874 3333332 12110
Q ss_pred hcCCcccCccceeEEEEeCCEEEEEe
Q 016239 310 LVDTEEDDKFASLKCVGLGNLIYVFN 335 (392)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~i~v~g 335 (392)
....+++..++.||+..
T Consensus 267 ---------~~~~~i~~~~g~l~v~~ 283 (299)
T 2z2n_A 267 ---------AEPHGICFDGETIWFAM 283 (299)
T ss_dssp ---------CCEEEEEECSSCEEEEE
T ss_pred ---------CccceEEecCCCEEEEe
Confidence 11333334778888876
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.96 E-value=0.12 Score=46.37 Aligned_cols=134 Identities=14% Similarity=0.184 Sum_probs=64.2
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcc-eEEee-cceEEeecC----cceEecCCcCceeecCCCCcCccCceEEEEEcCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGS-CFIGA-NGFFFTTTP----RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHD 151 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~g~i~v~gg----~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 151 (392)
..+..||..++++..+..+....... +++.. ++..++.++ +.+||.. ++++.....+.........+.+ ..
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~v~~~~~-~~- 106 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK-GRTWKPTLVILRINRAARCVRW-AP- 106 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE-TTEEEEEEECCCCSSCEEEEEE-CT-
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC-CCeeeeeEEeecCCCceeEEEE-CC-
Confidence 46788888887654443333222222 23332 454444433 3678876 5665433222211111112222 11
Q ss_pred CCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCC-eecCCCCCCCCCCCCCccceeeEEE--CCEEE
Q 016239 152 RGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDS-WELCPPLPADFRSGYSSQYLSSALF--RGRFY 228 (392)
Q Consensus 152 ~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly 228 (392)
+++.++.|+.+ ..+.+||..+.. |........+.... ...+.+ ++.++
T Consensus 107 -------------~~~~l~~~~~d-----------~~v~i~d~~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~l 157 (372)
T 1k8k_C 107 -------------NEKKFAVGSGS-----------RVISICYFEQENDWWVCKHIKKPIRST-----VLSLDWHPNSVLL 157 (372)
T ss_dssp -------------TSSEEEEEETT-----------SSEEEEEEETTTTEEEEEEECTTCCSC-----EEEEEECTTSSEE
T ss_pred -------------CCCEEEEEeCC-----------CEEEEEEecCCCcceeeeeeecccCCC-----eeEEEEcCCCCEE
Confidence 45566666541 135666655443 32222111110111 222333 57788
Q ss_pred EEeecccEEEEEECC
Q 016239 229 VFGIYSFSVSSFDLK 243 (392)
Q Consensus 229 ~~gg~~~~i~~yd~~ 243 (392)
+.|+..+.|..||..
T Consensus 158 ~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAY 172 (372)
T ss_dssp EEEETTSCEEEEECC
T ss_pred EEEcCCCCEEEEEcc
Confidence 888888899999964
No 42
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.85 E-value=0.23 Score=44.21 Aligned_cols=195 Identities=9% Similarity=-0.040 Sum_probs=89.7
Q ss_pred CCCEEEEEcccCCC-CCCCceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC----cceEecCCcCcee-ec
Q 016239 61 PRPWFFLFGLHNTS-SRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP----RFGFSRILNTSWH-LT 132 (392)
Q Consensus 61 ~~~~l~~~gg~~~~-~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg----~~~ynp~~~~~W~-~~ 132 (392)
.+..+|+....... .....++.+|+.+.+....-+... ....++.. ++.+|+.+. +.++|+. +++-. .+
T Consensus 51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~-~~~~~~~~ 127 (353)
T 3vgz_A 51 QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTVNSAVTAIDAK-TGEVKGRL 127 (353)
T ss_dssp TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETTTTEEEEEETT-TCCEEEEE
T ss_pred CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecCCCEEEEEeCC-CCeeEEEE
Confidence 34566665432110 113568899998776433211111 11223333 445777754 4788987 45432 22
Q ss_pred CCCCcCc-------cCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCC
Q 016239 133 SPLRFSR-------INPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPL 205 (392)
Q Consensus 133 ~~~~~~r-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 205 (392)
+.-...+ ....++.. + ++..+|+.+.. ....+.++|..+.+-...-+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~s--~-------------dg~~l~~~~~~----------~~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 128 VLDDRKRTEEVRPLQPRELVAD--D-------------ATNTVYISGIG----------KESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp ESCCCCCCSSCCCCEEEEEEEE--T-------------TTTEEEEEEES----------SSCEEEEEETTTTEEEEEECC
T ss_pred ecCCCccccccCCCCCceEEEC--C-------------CCCEEEEEecC----------CCceEEEEcCCCCceEEEecC
Confidence 1110000 01112222 1 15567776522 123688999876543221111
Q ss_pred CCCCCCCCCccceeeEEE-CC-EEEEEeecccEEEEEECCCCceeecccCCC--CcccceeEE-eeCC-eEEEEEeecCC
Q 016239 206 PADFRSGYSSQYLSSALF-RG-RFYVFGIYSFSVSSFDLKKHVWSEVQTLRP--PGVMFSFLI-ASPN-MLVLAGMCNAP 279 (392)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~--~~~~~~~~~-~~~g-~l~v~gg~~~~ 279 (392)
... .. ...+.. +| .+|+.. ..+.|..||+.+.+-........ .......++ ..+| .||+....
T Consensus 183 ~~~-~~------~~~~~s~dg~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--- 251 (353)
T 3vgz_A 183 TGK-MS------TGLALDSEGKRLYTTN-ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK--- 251 (353)
T ss_dssp CCT-TC------CCCEEETTTTEEEEEC-TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---
T ss_pred CCC-cc------ceEEECCCCCEEEEEc-CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---
Confidence 111 11 222332 44 455554 46789999998875443222211 111111222 2244 46665421
Q ss_pred CCCceeEEEeecCccceE
Q 016239 280 RGPSFNLWKVDELSMEFS 297 (392)
Q Consensus 280 ~~~~~~v~~~d~~~~~W~ 297 (392)
...|+.+|..+.+..
T Consensus 252 ---~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 252 ---AAEVLVVDTRNGNIL 266 (353)
T ss_dssp ---SSEEEEEETTTCCEE
T ss_pred ---CCEEEEEECCCCcEE
Confidence 235566688766543
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.74 E-value=0.11 Score=47.38 Aligned_cols=181 Identities=12% Similarity=0.046 Sum_probs=88.9
Q ss_pred EEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee-cc-eEEeecC----cceEecCCcCceeecCCCCc
Q 016239 64 WFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NG-FFFTTTP----RFGFSRILNTSWHLTSPLRF 137 (392)
Q Consensus 64 ~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g-~i~v~gg----~~~ynp~~~~~W~~~~~~~~ 137 (392)
.+++.++.+ ..+..+|..+++....- .......+++.. +| .||+.++ +.+||.. +++....-....
T Consensus 3 ~l~vs~~~d-----~~v~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~-~~~~~~~~~~~~ 74 (391)
T 1l0q_A 3 FAYIANSES-----DNISVIDVTSNKVTATI--PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA-TNNVIATVPAGS 74 (391)
T ss_dssp EEEEEETTT-----TEEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETT-TTEEEEEEECSS
T ss_pred EEEEEcCCC-----CEEEEEECCCCeEEEEe--ecCCCcceEEECCCCCEEEEECCCCCeEEEEECC-CCeEEEEEECCC
Confidence 456655533 45788898877643321 111112233333 44 5666653 3788887 554432211111
Q ss_pred CccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccc
Q 016239 138 SRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQY 217 (392)
Q Consensus 138 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 217 (392)
......+ ..++..+++.+.. ...+.+||..+++-...-..... .
T Consensus 75 ---~v~~~~~--------------spdg~~l~~~~~~-----------~~~v~v~d~~~~~~~~~~~~~~~--------~ 118 (391)
T 1l0q_A 75 ---SPQGVAV--------------SPDGKQVYVTNMA-----------SSTLSVIDTTSNTVAGTVKTGKS--------P 118 (391)
T ss_dssp ---SEEEEEE--------------CTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEEECSSS--------E
T ss_pred ---CccceEE--------------CCCCCEEEEEECC-----------CCEEEEEECCCCeEEEEEeCCCC--------c
Confidence 1112222 1114456666532 12688999887754332211111 1
Q ss_pred eeeEEE-CC-EEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCC-eEEEEEeecCCCCCceeEEEeecCcc
Q 016239 218 LSSALF-RG-RFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPN-MLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 218 ~~~~~~-~g-~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g-~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
...+.. ++ .+|+.++..+.|..||+.+.+....-.... .. .......++ .|++.+..+. .+.+| |..+.
T Consensus 119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~-~~~~~~~dg~~l~~~~~~~~----~v~~~--d~~~~ 190 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SP-KGIAVTPDGTKVYVANFDSM----SISVI--DTVTN 190 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SE-EEEEECTTSSEEEEEETTTT----EEEEE--ETTTT
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-Cc-ceEEECCCCCEEEEEeCCCC----EEEEE--ECCCC
Confidence 222222 34 577888778899999998876544322211 11 111122245 4556553221 45555 77665
Q ss_pred ce
Q 016239 295 EF 296 (392)
Q Consensus 295 ~W 296 (392)
+.
T Consensus 191 ~~ 192 (391)
T 1l0q_A 191 SV 192 (391)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 44
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.72 E-value=0.11 Score=45.15 Aligned_cols=145 Identities=8% Similarity=-0.082 Sum_probs=85.3
Q ss_pred CEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEeecceEEeecC----cceEecCCcCceeecCCCCcC
Q 016239 63 PWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGANGFFFTTTP----RFGFSRILNTSWHLTSPLRFS 138 (392)
Q Consensus 63 ~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g~i~v~gg----~~~ynp~~~~~W~~~~~~~~~ 138 (392)
+.+|+..|..+. +.+..+|+.+++-..--+++......+++..++.||+... +++||+. +.+- +...+.+
T Consensus 32 g~Lyvstg~~~~---s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~-t~~v--~~~i~~g 105 (266)
T 2iwa_A 32 DTLFESTGLYGR---SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRR-TLSN--IKNFTHQ 105 (266)
T ss_dssp TEEEEEECSTTT---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETT-TTEE--EEEEECC
T ss_pred CeEEEECCCCCC---CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECC-CCcE--EEEEECC
Confidence 688887653222 6789999998875443223322233356667889999863 4899987 4432 2222222
Q ss_pred -ccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCee-cCC--CCCCCCCCCCC
Q 016239 139 -RINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWE-LCP--PLPADFRSGYS 214 (392)
Q Consensus 139 -r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~-~~~--~~~~~~~~~~~ 214 (392)
....+++.- +.++|+.-|. ..+.+.|+.+.+=. .+. .-+.+...
T Consensus 106 ~~~g~glt~D-----------------g~~l~vs~gs------------~~l~viD~~t~~v~~~I~Vg~~~~p~~~--- 153 (266)
T 2iwa_A 106 MKDGWGLATD-----------------GKILYGSDGT------------SILYEIDPHTFKLIKKHNVKYNGHRVIR--- 153 (266)
T ss_dssp SSSCCEEEEC-----------------SSSEEEECSS------------SEEEEECTTTCCEEEEEECEETTEECCC---
T ss_pred CCCeEEEEEC-----------------CCEEEEECCC------------CeEEEEECCCCcEEEEEEECCCCccccc---
Confidence 112222222 6788887542 27889998875422 221 11111111
Q ss_pred ccceeeEEECCEEEEEeecccEEEEEECCCCce
Q 016239 215 SQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVW 247 (392)
Q Consensus 215 ~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W 247 (392)
.......+|++|+-...++.|.+.|+.+.+-
T Consensus 154 --~nele~~dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 154 --LNELEYINGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp --EEEEEEETTEEEEEETTSSEEEEEETTTCCE
T ss_pred --ceeEEEECCEEEEecCCCCeEEEEECCCCcE
Confidence 1234455899998877778999999988753
No 45
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.64 E-value=0.059 Score=49.12 Aligned_cols=144 Identities=15% Similarity=0.095 Sum_probs=75.3
Q ss_pred CCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC----cceEecCCcCceeecCC
Q 016239 61 PRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP----RFGFSRILNTSWHLTSP 134 (392)
Q Consensus 61 ~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg----~~~ynp~~~~~W~~~~~ 134 (392)
.+..+++.++.+ ..+..+|..+++....-.... .-..++.. +..|++.+. +.+||.. +++....-.
T Consensus 42 dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~~~v~v~d~~-~~~~~~~~~ 113 (391)
T 1l0q_A 42 DGTKVYVANAHS-----NDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMASSTLSVIDTT-SNTVAGTVK 113 (391)
T ss_dssp TSSEEEEEEGGG-----TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEE
T ss_pred CCCEEEEECCCC-----CeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCCCEEEEEECC-CCeEEEEEe
Confidence 344566655433 467889988776543222111 22233333 445666653 3788987 554332211
Q ss_pred CCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCC
Q 016239 135 LRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYS 214 (392)
Q Consensus 135 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~ 214 (392)
... ......+ ..++..+|+.++. ...+.+||..+++....-.....
T Consensus 114 --~~~-~~~~~~~--------------s~dg~~l~~~~~~-----------~~~v~~~d~~~~~~~~~~~~~~~------ 159 (391)
T 1l0q_A 114 --TGK-SPLGLAL--------------SPDGKKLYVTNNG-----------DKTVSVINTVTKAVINTVSVGRS------ 159 (391)
T ss_dssp --CSS-SEEEEEE--------------CTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEEECCSS------
T ss_pred --CCC-CcceEEE--------------CCCCCEEEEEeCC-----------CCEEEEEECCCCcEEEEEecCCC------
Confidence 111 1112222 1114457677653 12688999887765433221111
Q ss_pred ccceeeEEE--CC-EEEEEeecccEEEEEECCCCceee
Q 016239 215 SQYLSSALF--RG-RFYVFGIYSFSVSSFDLKKHVWSE 249 (392)
Q Consensus 215 ~~~~~~~~~--~g-~ly~~gg~~~~i~~yd~~~~~W~~ 249 (392)
...+.+ ++ .+|+.++..+.|..||+.+++...
T Consensus 160 ---~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 160 ---PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp ---EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ---cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 222222 34 677777777899999998876443
No 46
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.60 E-value=0.063 Score=49.72 Aligned_cols=180 Identities=11% Similarity=-0.072 Sum_probs=89.0
Q ss_pred ceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeecC----cceEecCCcCceeecCCCCc--CccCc-eEEEEEcC
Q 016239 79 QSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTTP----RFGFSRILNTSWHLTSPLRF--SRINP-LVGVFYDH 150 (392)
Q Consensus 79 ~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~gg----~~~ynp~~~~~W~~~~~~~~--~r~~~-~~~~~~~~ 150 (392)
.++.+|+.+..+..+..++.+....+++.. ++.+++.++ +.+||+. +++.....+... ..... ..+.+ ..
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~v~~~~~-~~ 179 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDIN-SGQTVRLSPPEKYKKKLGFVETISI-PE 179 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETT-TCCEEEECCCHHHHTTCCEEEEEEE-GG
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECC-CCeEeeecCcccccccCCceeEEEE-cC
Confidence 577788876655544333322222233333 777777753 4788987 565543322211 11111 11222 11
Q ss_pred CCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEE
Q 016239 151 DRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFY 228 (392)
Q Consensus 151 ~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly 228 (392)
++++++.++. ...+.+||..+++-...-.... .. ....+.. +..+|
T Consensus 180 --------------~~~~~~s~~~-----------d~~v~~~d~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~l~ 227 (433)
T 3bws_A 180 --------------HNELWVSQMQ-----------ANAVHVFDLKTLAYKATVDLTG--KW-----SKILLYDPIRDLVY 227 (433)
T ss_dssp --------------GTEEEEEEGG-----------GTEEEEEETTTCCEEEEEECSS--SS-----EEEEEEETTTTEEE
T ss_pred --------------CCEEEEEECC-----------CCEEEEEECCCceEEEEEcCCC--CC-----eeEEEEcCCCCEEE
Confidence 6788887764 1268899987754322111111 11 1223333 34577
Q ss_pred EEeecccEEEEEECCCCceeecccCCCCcccceeEE-eeCCeEEEEEeecCCCC--CceeEEEeecCccc
Q 016239 229 VFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLI-ASPNMLVLAGMCNAPRG--PSFNLWKVDELSME 295 (392)
Q Consensus 229 ~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~-~~~g~l~v~gg~~~~~~--~~~~v~~~d~~~~~ 295 (392)
+.+...+.|..||+.+.+....-. .... ...+. ..+++.+++++...... ....|+.+|..+.+
T Consensus 228 ~~~~~~~~i~~~d~~~~~~~~~~~--~~~~-~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 228 CSNWISEDISVIDRKTKLEIRKTD--KIGL-PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEECC--CCSE-EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred EEecCCCcEEEEECCCCcEEEEec--CCCC-ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 777677899999998876533322 1111 22222 23565555544322211 12345555876654
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.60 E-value=0.094 Score=47.22 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=38.8
Q ss_pred CCEEEEEeecccEEEEEECCCCc--eeecccCCCCcccceeEE-eeC---CeEEEEEeecCCCCCceeEEEeecC
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV--WSEVQTLRPPGVMFSFLI-ASP---NMLVLAGMCNAPRGPSFNLWKVDEL 292 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~--W~~i~~~~~~~~~~~~~~-~~~---g~l~v~gg~~~~~~~~~~v~~~d~~ 292 (392)
++.+++.|+..+.|..||..+.. +..+............+. ..+ +++++.++.++ .+.+|.++..
T Consensus 171 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg----~i~iwd~~~~ 241 (379)
T 3jrp_A 171 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR----TCIIWTQDNE 241 (379)
T ss_dssp TTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS----CEEEEEESST
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC----EEEEEeCCCC
Confidence 47888888888899999986543 444433332121222222 224 67777776543 6888855443
No 48
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.60 E-value=0.26 Score=44.36 Aligned_cols=115 Identities=13% Similarity=0.105 Sum_probs=63.3
Q ss_pred CC-EEEEEeecccEEEEEECCCCceeecccC---CCCcccceeEE-eeCCe-EEEEEeecCCCCCceeEEEeecCccceE
Q 016239 224 RG-RFYVFGIYSFSVSSFDLKKHVWSEVQTL---RPPGVMFSFLI-ASPNM-LVLAGMCNAPRGPSFNLWKVDELSMEFS 297 (392)
Q Consensus 224 ~g-~ly~~gg~~~~i~~yd~~~~~W~~i~~~---~~~~~~~~~~~-~~~g~-l~v~gg~~~~~~~~~~v~~~d~~~~~W~ 297 (392)
+| .+|+.+...+.|..||..++++..+... +........++ .-+|+ ||+.... ....+.+|.+|..+.+++
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~---~~~~i~v~~~~~~~g~~~ 297 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL---KADGVAIFKVDETNGTLT 297 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS---SSCEEEEEEECTTTCCEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC---CCCEEEEEEEcCCCCcEE
Confidence 45 4777765678899999988776554332 21111112222 33666 4554422 012688888877777777
Q ss_pred ecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCc
Q 016239 298 EIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 298 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
.+..++.... -..+++...|..||+.+. ....+.++++|+++++
T Consensus 298 ~~~~~~~g~~-----------~~~~~~spdg~~l~~~~~---~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 298 KVGYQLTGIH-----------PRNFIITPNGKYLLVACR---DTNVIQIFERDQATGL 341 (361)
T ss_dssp EEEEEECSSC-----------CCEEEECTTSCEEEEEET---TTTEEEEEEECTTTCC
T ss_pred EeeEecCCCC-----------CceEEECCCCCEEEEEEC---CCCCEEEEEEECCCCc
Confidence 6665443100 012222223445666653 2355667777888887
No 49
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.51 E-value=0.16 Score=43.99 Aligned_cols=185 Identities=8% Similarity=-0.009 Sum_probs=91.5
Q ss_pred CCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeecC----cceEecCCcCceeecCCC
Q 016239 61 PRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTTP----RFGFSRILNTSWHLTSPL 135 (392)
Q Consensus 61 ~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~gg----~~~ynp~~~~~W~~~~~~ 135 (392)
.++.+|+..... ...+..||+.......+..... .....++.. +|.+|+... +.+||+. .+....+...
T Consensus 87 ~~g~l~v~~~~~----~~~i~~~d~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~ 160 (286)
T 1q7f_A 87 NSGDIIVTERSP----THQIQIYNQYGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCS 160 (286)
T ss_dssp TTTEEEEEECGG----GCEEEEECTTSCEEEEECTTTC-SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECT
T ss_pred CCCeEEEEcCCC----CCEEEEECCCCcEEEEecCccC-CCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCC
Confidence 455666654211 1457788855443333322111 112244443 677888742 4788876 4433333211
Q ss_pred CcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCc
Q 016239 136 RFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSS 215 (392)
Q Consensus 136 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 215 (392)
... .......+ +. ++++|+.... ...+.+||+....-..+..-. ....
T Consensus 161 ~~~-~~p~~i~~-~~--------------~g~l~v~~~~-----------~~~i~~~~~~g~~~~~~~~~g-~~~~---- 208 (286)
T 1q7f_A 161 KHL-EFPNGVVV-ND--------------KQEIFISDNR-----------AHCVKVFNYEGQYLRQIGGEG-ITNY---- 208 (286)
T ss_dssp TTC-SSEEEEEE-CS--------------SSEEEEEEGG-----------GTEEEEEETTCCEEEEESCTT-TSCS----
T ss_pred Ccc-CCcEEEEE-CC--------------CCCEEEEECC-----------CCEEEEEcCCCCEEEEEccCC-ccCC----
Confidence 111 11112222 22 5788887542 226888988654333332210 0011
Q ss_pred cceeeEEE--CCEEEEEeeccc-EEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEee
Q 016239 216 QYLSSALF--RGRFYVFGIYSF-SVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 216 ~~~~~~~~--~g~ly~~gg~~~-~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d 290 (392)
...+.+ +|.+|+.....+ .|..||+..+.-..+........-....+.-+|+||+... + ..+.+|.++
T Consensus 209 --p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~-~----~~v~v~~~~ 279 (286)
T 1q7f_A 209 --PIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK-D----YRLYIYRYV 279 (286)
T ss_dssp --EEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET-T----TEEEEEECS
T ss_pred --CcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC-C----CeEEEEEcc
Confidence 233333 678999887665 8999998655444443322111111222334789888742 1 267888653
No 50
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.50 E-value=0.36 Score=41.74 Aligned_cols=176 Identities=9% Similarity=-0.058 Sum_probs=90.1
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEe-ecceEEeec----CcceEecCCcCceeecCCCCcCccCceEEEEEcCCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIG-ANGFFFTTT----PRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDR 152 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~g~i~v~g----g~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 152 (392)
..+..||+. +...............+++. .+|.+|+.. +++++|+. ++.+... ++........... +.
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~-~~~~~~~~~~i~~-~~-- 108 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK--GIIKEYT-LPNPDSAPYGITE-GP-- 108 (299)
T ss_dssp TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEE-CSSTTCCEEEEEE-CT--
T ss_pred CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC--CcEEEEe-CCCcCCCceeeEE-CC--
Confidence 457889988 66654432211122234444 377788764 25788875 3443332 1111111112222 22
Q ss_pred CcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-CCEEEEEe
Q 016239 153 GHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-RGRFYVFG 231 (392)
Q Consensus 153 ~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~g~ly~~g 231 (392)
++++|+.... ...+.++|+ +++...... +..... ....+.. +|.+|+..
T Consensus 109 ------------~g~l~v~~~~-----------~~~i~~~d~-~g~~~~~~~-~~~~~~-----~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 109 ------------NGDIWFTEMN-----------GNRIGRITD-DGKIREYEL-PNKGSY-----PSFITLGSDNALWFTE 158 (299)
T ss_dssp ------------TSCEEEEETT-----------TTEEEEECT-TCCEEEEEC-SSTTCC-----EEEEEECTTSCEEEEE
T ss_pred ------------CCCEEEEecC-----------CceEEEECC-CCCEEEecC-CCCCCC-----CceEEEcCCCCEEEEe
Confidence 5688887432 125788888 555544321 111011 1222332 57898876
Q ss_pred ecccEEEEEECCCCceeecccCCCCcccceeEEe-eCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 232 IYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 232 g~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
...+.|..||+ +++...+..... ......++. .+|+||+.... ...|+++|+ +.+...+
T Consensus 159 ~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 159 NQNNAIGRITE-SGDITEFKIPTP-ASGPVGITKGNDDALWFVEII------GNKIGRITT-SGEITEF 218 (299)
T ss_dssp TTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEE
T ss_pred CCCCEEEEEcC-CCcEEEeeCCCC-CCcceeEEECCCCCEEEEccC------CceEEEECC-CCcEEEE
Confidence 55678999999 777665422211 111222333 36888886531 235677788 5555543
No 51
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.46 E-value=0.51 Score=44.01 Aligned_cols=157 Identities=9% Similarity=-0.061 Sum_probs=83.5
Q ss_pred CeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCC
Q 016239 166 PKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKH 245 (392)
Q Consensus 166 ~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~ 245 (392)
+++++.|+.+ ..+.+||..++.-...-.... ... ..+.+..++.+++.|+.++.|..||..+.
T Consensus 210 ~~~l~s~~~d-----------~~i~vwd~~~~~~~~~~~~~h--~~~----v~~~~~sd~~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 210 HQFIITSDRD-----------EHIKISHYPQCFIVDKWLFGH--KHF----VSSICCGKDYLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp CEEEEEEETT-----------SCEEEEEESCTTCEEEECCCC--SSC----EEEEEECSTTEEEEEESSSEEEEEETTTC
T ss_pred CcEEEEEcCC-----------CcEEEEECCCCceeeeeecCC--CCc----eEEEEECCCCEEEEEeCCCeEEEEECCCC
Confidence 6777777651 258888877654321100001 110 01222227888888888899999999887
Q ss_pred ceeecccC-------------C----------CCcccceeEE-eeCCeEEEEEeecCCCCCceeEEEe-ecCccceEecc
Q 016239 246 VWSEVQTL-------------R----------PPGVMFSFLI-ASPNMLVLAGMCNAPRGPSFNLWKV-DELSMEFSEIA 300 (392)
Q Consensus 246 ~W~~i~~~-------------~----------~~~~~~~~~~-~~~g~l~v~gg~~~~~~~~~~v~~~-d~~~~~W~~~~ 300 (392)
+....-.. + ........+. ..++++++++.... ..+.+|.+ +.....++.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d---~~i~iw~~~~~~~~~l~~~~ 349 (450)
T 2vdu_B 273 KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT---KCIIILEMSEKQKGDLALKQ 349 (450)
T ss_dssp CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC---SEEEEEEECSSSTTCEEEEE
T ss_pred cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC---CeEEEEEeccCCCCceeecc
Confidence 53322110 0 0001111222 22566665554221 16888866 44445566555
Q ss_pred cCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEecccc----CCCCeEEEEeecCCCc
Q 016239 301 IMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYH----KKYPACVCEIGTESDK 355 (392)
Q Consensus 301 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~----~~~~~~~~~~d~~~~~ 355 (392)
.++... ....+....+.+++..+..+ ....+.++.++.++++
T Consensus 350 ~~~~~~-------------~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~ 395 (450)
T 2vdu_B 350 IITFPY-------------NVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENS 395 (450)
T ss_dssp EEECSS-------------CEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTE
T ss_pred EeccCC-------------ceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCe
Confidence 543221 14566667788888765432 1344677777877777
No 52
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.43 E-value=0.58 Score=43.42 Aligned_cols=94 Identities=15% Similarity=0.144 Sum_probs=51.3
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeC
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASP 267 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~ 267 (392)
.+.+||..+++-... +... ... ......++.+++.|+.++.|..||+.+.+-...-..+.........+..+
T Consensus 300 ~i~i~d~~~~~~~~~--~~~~-~~~-----v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 371 (445)
T 2ovr_B 300 SIRVWDVETGNCIHT--LTGH-QSL-----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 371 (445)
T ss_dssp CEEEEETTTCCEEEE--ECCC-CSC-----EEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC
T ss_pred eEEEEECCCCCEEEE--EcCC-ccc-----EEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC
Confidence 588888876542211 1111 111 34445567778888888999999997764322211111111112223446
Q ss_pred CeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 268 NMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 268 g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+.+++.|+.++ .+.+| |..+.+
T Consensus 372 ~~~l~s~~~dg----~v~iw--d~~~~~ 393 (445)
T 2ovr_B 372 KNFVITSSDDG----TVKLW--DLKTGE 393 (445)
T ss_dssp SSEEEEEETTS----EEEEE--ETTTCC
T ss_pred CCEEEEEeCCC----eEEEE--ECCCCc
Confidence 77777776443 67888 655544
No 53
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.40 E-value=0.44 Score=41.70 Aligned_cols=221 Identities=13% Similarity=0.048 Sum_probs=107.2
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec--CcceEecCCcCceeecCCCCcC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT--PRFGFSRILNTSWHLTSPLRFS 138 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g--g~~~ynp~~~~~W~~~~~~~~~ 138 (392)
.+.+|+.... ...++.||+.++......... .-.+++.. +|.+++.. ++++||+. +++.+.+......
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~dG~l~v~~~~~l~~~d~~-~g~~~~~~~~~~~ 94 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTMDA---PVSSVALRQSGGYVATIGTKFCALNWK-EQSAVVLATVDND 94 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEECSS---CEEEEEEBTTSSEEEEETTEEEEEETT-TTEEEEEEECCTT
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeCCC---ceEEEEECCCCCEEEEECCeEEEEECC-CCcEEEEEecCCC
Confidence 3455555332 256889999887654332211 11233333 56666553 35889998 6777665443221
Q ss_pred --ccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCcc
Q 016239 139 --RINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQ 216 (392)
Q Consensus 139 --r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 216 (392)
.....-..+ +. ++++|+..-...............++.+|+. ++-..+.. ....
T Consensus 95 ~~~~~~~di~~-d~--------------dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~---~~~~----- 150 (297)
T 3g4e_A 95 KKNNRFNDGKV-DP--------------AGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD---QVDI----- 150 (297)
T ss_dssp CSSEEEEEEEE-CT--------------TSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE---EESB-----
T ss_pred CCCCCCCCEEE-CC--------------CCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEee---cccc-----
Confidence 111111222 22 5677764311000000000123467888874 33332211 0011
Q ss_pred ceeeEEE--CC-EEEEEeecccEEEEEEC--CCCceee---cccCCCCcccceeEE-eeCCeEEEEEeecCCCCCceeEE
Q 016239 217 YLSSALF--RG-RFYVFGIYSFSVSSFDL--KKHVWSE---VQTLRPPGVMFSFLI-ASPNMLVLAGMCNAPRGPSFNLW 287 (392)
Q Consensus 217 ~~~~~~~--~g-~ly~~gg~~~~i~~yd~--~~~~W~~---i~~~~~~~~~~~~~~-~~~g~l~v~gg~~~~~~~~~~v~ 287 (392)
.....+ ++ .||+.....+.|++||. .+.+... +............++ ..+|+||+.... ...|+
T Consensus 151 -pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~------~~~v~ 223 (297)
T 3g4e_A 151 -SNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN------GGRVI 223 (297)
T ss_dssp -EEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET------TTEEE
T ss_pred -ccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC------CCEEE
Confidence 223333 34 68998877789999986 4544321 111111011112233 347899987642 23477
Q ss_pred EeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEe---CCEEEEEec
Q 016239 288 KVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGL---GNLIYVFNE 336 (392)
Q Consensus 288 ~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~v~gg 336 (392)
+||+++.+....-.+|.. ...+++.. +++|||...
T Consensus 224 ~~d~~tG~~~~~i~~p~~--------------~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 224 RLDPVTGKRLQTVKLPVD--------------KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EECTTTCCEEEEEECSSS--------------BEEEEEEESGGGCEEEEEEB
T ss_pred EEcCCCceEEEEEECCCC--------------CceEEEEeCCCCCEEEEEcC
Confidence 789986655444444532 12333333 358999875
No 54
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.40 E-value=0.32 Score=42.07 Aligned_cols=187 Identities=9% Similarity=-0.050 Sum_probs=94.6
Q ss_pred CCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeecC----cceEecCCcCceeecCCC
Q 016239 61 PRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTTP----RFGFSRILNTSWHLTSPL 135 (392)
Q Consensus 61 ~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~gg----~~~ynp~~~~~W~~~~~~ 135 (392)
.++.+++.... ...+..||+. ++..............+++.. +|.+|+... +.+||+. ++......
T Consensus 29 ~~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~~~~~~~- 99 (300)
T 2qc5_A 29 EDGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GGFTEYPL- 99 (300)
T ss_dssp TTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEC-
T ss_pred CCCCEEEEcCC-----CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CCeEEecC-
Confidence 34556665321 1457889988 665543221111122344443 677888642 5788876 34443221
Q ss_pred CcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCc
Q 016239 136 RFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSS 215 (392)
Q Consensus 136 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 215 (392)
+..........+ +. ++++|+.... ...+..||+. ++..... ++.....
T Consensus 100 ~~~~~~~~~i~~-~~--------------~g~l~v~~~~-----------~~~i~~~~~~-g~~~~~~-~~~~~~~---- 147 (300)
T 2qc5_A 100 PQPDSGPYGITE-GL--------------NGDIWFTQLN-----------GDRIGKLTAD-GTIYEYD-LPNKGSY---- 147 (300)
T ss_dssp SSTTCCEEEEEE-CS--------------TTCEEEEETT-----------TTEEEEECTT-SCEEEEE-CSSTTCC----
T ss_pred CCCCCCCccceE-CC--------------CCCEEEEccC-----------CCeEEEECCC-CCEEEcc-CCCCCCC----
Confidence 111111222222 22 6778887532 1257888886 5554332 1211011
Q ss_pred cceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe-eCCeEEEEEeecCCCCCceeEEEeecC
Q 016239 216 QYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDEL 292 (392)
Q Consensus 216 ~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~ 292 (392)
...... +|.+|+.....+.|..||+ +++...+..... ......++. .+|.||+.... ...|+++|+
T Consensus 148 --~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~- 216 (300)
T 2qc5_A 148 --PAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTN-AAAPVGITSGNDGALWFVEIM------GNKIGRITT- 216 (300)
T ss_dssp --EEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETT------TTEEEEECT-
T ss_pred --ceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCC-CCCcceEEECCCCCEEEEccC------CCEEEEEcC-
Confidence 223333 5788887765678999999 666665432211 111222333 37888886531 235677787
Q ss_pred ccceEec
Q 016239 293 SMEFSEI 299 (392)
Q Consensus 293 ~~~W~~~ 299 (392)
+.+....
T Consensus 217 ~g~~~~~ 223 (300)
T 2qc5_A 217 TGEISEY 223 (300)
T ss_dssp TCCEEEE
T ss_pred CCcEEEE
Confidence 4455543
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.38 E-value=0.36 Score=42.42 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=49.2
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA 265 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~ 265 (392)
.+.+||..+.+-...-..+.. ...+.+ ++.++++|+..+.|..||..+.+-..+... ..........
T Consensus 206 ~i~~~d~~~~~~~~~~~~~~~---------v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--~~~v~~~~~~ 274 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDFTSQ---------IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH--ESCVLSLKFA 274 (337)
T ss_dssp EEEEEETTTTEEEEEEECSSC---------EEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCC--SSCEEEEEEC
T ss_pred cEEEEECCCCceEeeecCCCc---------eEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCC--ccceeEEEEC
Confidence 588888876543222111111 222222 677888888888999999987753333211 1111122223
Q ss_pred eCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 266 SPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 266 ~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
.++++++.++.++ .+.+| |..+.+
T Consensus 275 ~~~~~l~~~~~dg----~i~~~--~~~~~~ 298 (337)
T 1gxr_A 275 YCGKWFVSTGKDN----LLNAW--RTPYGA 298 (337)
T ss_dssp TTSSEEEEEETTS----EEEEE--ETTTCC
T ss_pred CCCCEEEEecCCC----cEEEE--ECCCCe
Confidence 3677777776432 57777 554443
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.32 Score=43.63 Aligned_cols=116 Identities=9% Similarity=0.135 Sum_probs=64.9
Q ss_pred CeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--C--CEEEEEeecccEEEEEE
Q 016239 166 PKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--R--GRFYVFGIYSFSVSSFD 241 (392)
Q Consensus 166 ~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~--g~ly~~gg~~~~i~~yd 241 (392)
+.+++.|+.+ ..+.+||..++.|..+..+... ... ...+.+ + +.+++.++..+.|..||
T Consensus 69 ~~~l~s~~~d-----------g~v~iwd~~~~~~~~~~~~~~~-~~~-----v~~~~~~~~~~~~~l~~~~~d~~i~v~d 131 (379)
T 3jrp_A 69 GTILASCSYD-----------GKVLIWKEENGRWSQIAVHAVH-SAS-----VNSVQWAPHEYGPLLLVASSDGKVSVVE 131 (379)
T ss_dssp CSEEEEEETT-----------SCEEEEEEETTEEEEEEEECCC-SSC-----EEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCEEEEeccC-----------CEEEEEEcCCCceeEeeeecCC-Ccc-----eEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence 5677776641 2588888888887666543322 111 233333 3 67888888889999999
Q ss_pred CCCCceeecccCCCCcccceeEEee--------------CCeEEEEEeecCCCCCceeEEEeecCccceEecccC
Q 016239 242 LKKHVWSEVQTLRPPGVMFSFLIAS--------------PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIM 302 (392)
Q Consensus 242 ~~~~~W~~i~~~~~~~~~~~~~~~~--------------~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~ 302 (392)
+.+..-...............+... ++.+++.|+.+. .+.+|.+......+..+..+
T Consensus 132 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~ 202 (379)
T 3jrp_A 132 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN----LVKIWKYNSDAQTYVLESTL 202 (379)
T ss_dssp CCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS----CEEEEEEETTTTEEEEEEEE
T ss_pred cCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC----eEEEEEecCCCcceeeEEEE
Confidence 9876322211111111111112222 477777776543 68888665555556555443
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.32 E-value=0.096 Score=47.41 Aligned_cols=148 Identities=14% Similarity=0.104 Sum_probs=68.8
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcc-eEEee-cceEEeecC----cceEecCCcCc-eeecCC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGS-CFIGA-NGFFFTTTP----RFGFSRILNTS-WHLTSP 134 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~g~i~v~gg----~~~ynp~~~~~-W~~~~~ 134 (392)
++.+++.++.+ ..+.+||..++.|..+..+....... +++.. ++..++.++ +.+||.. +++ |.....
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~-~~~~~~~~~~ 95 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR-PDGTWKQTLV 95 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-------CCCCEEE
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC-CCCceeeeeE
Confidence 34455555433 35677888887776666555433322 23322 455455443 3677876 444 433222
Q ss_pred CCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCC-eecCCCCCCCCCCCC
Q 016239 135 LRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDS-WELCPPLPADFRSGY 213 (392)
Q Consensus 135 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~ 213 (392)
+...... ...+. |.. +++.++.|+.+ ..+.+||..++. |.....+..+....
T Consensus 96 ~~~~~~~-v~~~~-------------~~~-~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~~~~~~~~h~~~- 148 (377)
T 3dwl_C 96 LLRLNRA-ATFVR-------------WSP-NEDKFAVGSGA-----------RVISVCYFEQENDWWVSKHLKRPLRST- 148 (377)
T ss_dssp CCCCSSC-EEEEE-------------CCT-TSSCCEEEESS-----------SCEEECCC-----CCCCEEECSSCCSC-
T ss_pred ecccCCc-eEEEE-------------ECC-CCCEEEEEecC-----------CeEEEEEECCcccceeeeEeecccCCC-
Confidence 2211111 11111 111 45555665541 157788877664 44443322210111
Q ss_pred CccceeeEEE--CCEEEEEeecccEEEEEECCCCc
Q 016239 214 SSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 214 ~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~ 246 (392)
...+.+ ++.+.+.|+.++.|..||..+..
T Consensus 149 ----v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 149 ----ILSLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp ----EEEEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred ----eEEEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 222333 57788888888899999986443
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.30 E-value=0.23 Score=45.62 Aligned_cols=66 Identities=12% Similarity=0.098 Sum_probs=36.0
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
++.+++.|+.++.|..||..+.+-...-.... .....+... +..+++.|+... ...+.+| |..+.+
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~p~~~~ll~~~~gs~--d~~i~i~--d~~~~~ 295 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTKTNHN--AAVKAVAWCPWQSNLLATGGGTM--DKQIHFW--NAATGA 295 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEECCCS--SCCCEEEECTTSTTEEEEECCTT--TCEEEEE--ETTTCC
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEecCCc--ceEEEEEECCCCCCEEEEecCCC--CCEEEEE--ECCCCC
Confidence 67788888888999999998754322211111 111222222 456777664111 1156777 655443
No 59
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.30 E-value=0.23 Score=50.21 Aligned_cols=180 Identities=11% Similarity=0.065 Sum_probs=95.2
Q ss_pred ceeeeeCCCCceeeCCCCCC-CCC-cceEEee-cceEEee---cCcceEecCCcCceeecCCCCcCccCceEEEEEcCCC
Q 016239 79 QSFAFDPASNSWFHLPPAQE-PRA-GSCFIGA-NGFFFTT---TPRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDR 152 (392)
Q Consensus 79 ~~~~yd~~~~~W~~~~~~~~-~r~-~~~~~~~-~g~i~v~---gg~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 152 (392)
.+..||+.++++........ +.. -.+++.. +|.|++. +|.++||+. +++++........ .....+...+.
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~-~~~~~~~~~~~~~-~~~v~~i~~d~-- 459 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTR-LKKFQIIELEKNE-LLDVRVFYEDK-- 459 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSS-SCEEEECCSTTTC-CCCEEEEEECT--
T ss_pred cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCC-CCcEEEeccCCCC-CCeEEEEEECC--
Confidence 35667777665554421111 111 1233333 6777775 467899998 6888766532111 11222222222
Q ss_pred CcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCC-CCCCCCCccceeeEEE--CCEEEE
Q 016239 153 GHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPA-DFRSGYSSQYLSSALF--RGRFYV 229 (392)
Q Consensus 153 ~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~~~~~~~~~~~~~~~~--~g~ly~ 229 (392)
++.+++... ..+.+||+.+++|+....... ..... ....... +|.|++
T Consensus 460 ------------~g~lwigt~-------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~----~i~~i~~d~~g~lWi 510 (781)
T 3v9f_A 460 ------------NKKIWIGTH-------------AGVFVIDLASKKVIHHYDTSNSQLLEN----FVRSIAQDSEGRFWI 510 (781)
T ss_dssp ------------TSEEEEEET-------------TEEEEEESSSSSCCEEECTTTSSCSCS----CEEEEEECTTCCEEE
T ss_pred ------------CCCEEEEEC-------------CceEEEeCCCCeEEecccCcccccccc----eeEEEEEcCCCCEEE
Confidence 567776532 158889999988876543221 00000 1222222 466665
Q ss_pred EeecccEEEEEECCCCceeecccCCC-CcccceeEEe-eCCeEEEEEeecCCCCCceeE-EEeecCccceEecc
Q 016239 230 FGIYSFSVSSFDLKKHVWSEVQTLRP-PGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNL-WKVDELSMEFSEIA 300 (392)
Q Consensus 230 ~gg~~~~i~~yd~~~~~W~~i~~~~~-~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v-~~~d~~~~~W~~~~ 300 (392)
|...+-+.+||+.+++++....... .......+.. .+|.|++... ..+ ++||+.+.+++...
T Consensus 511 -gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--------~Glv~~~d~~~~~~~~~~ 575 (781)
T 3v9f_A 511 -GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--------EGLVCFPSARNFDYQVFQ 575 (781)
T ss_dssp -EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--------TEEEEESCTTTCCCEEEC
T ss_pred -EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--------CCceEEECCCCCcEEEcc
Confidence 4443458999999998887654221 1111122333 4788887542 134 78899888877654
No 60
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.29 E-value=0.23 Score=44.37 Aligned_cols=146 Identities=11% Similarity=0.086 Sum_probs=69.0
Q ss_pred EEEEEeCC-CCCeecCCCCCCCCCCCCCccceeeEE-ECCE-EEEEeecccEEEEEECC--CCceeeccc---CCCC---
Q 016239 188 AVEIYDPH-SDSWELCPPLPADFRSGYSSQYLSSAL-FRGR-FYVFGIYSFSVSSFDLK--KHVWSEVQT---LRPP--- 256 (392)
Q Consensus 188 ~~~~yd~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~-ly~~gg~~~~i~~yd~~--~~~W~~i~~---~~~~--- 256 (392)
.+.+||.. +++...+.......... ....+. -+|+ +|+.+...+.+..||.. ++++..+.. .+..
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~----p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFG----PRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCC----EEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCC----CceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 67888876 45554332111110111 012222 2555 88877666777777655 466554322 2211
Q ss_pred cccceeE-EeeCCe-EEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEE
Q 016239 257 GVMFSFL-IASPNM-LVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVF 334 (392)
Q Consensus 257 ~~~~~~~-~~~~g~-l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 334 (392)
......+ +.-+|+ ||+..... ..+.+|.++.. .+++.+..++... .. -...++...|..||+.
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~----~~v~v~~~~~~-g~~~~~~~~~~~~------~~----~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGY----NTLAVFAVTAD-GHLTLIQQISTEG------DF----PRDFDLDPTEAFVVVV 303 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETT----TEEEEEEECGG-GCEEEEEEEECSS------SC----CCEEEECTTSSEEEEE
T ss_pred CCcceeEEECCCCCEEEEEeCCC----CEEEEEEECCC-CcEEEeEEEecCC------CC----cCeEEECCCCCEEEEE
Confidence 0111222 333665 66655322 15777765532 2555555444310 00 0122222234457776
Q ss_pred eccccCCCCeEEEEeecCCCc
Q 016239 335 NEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 335 gg~~~~~~~~~~~~~d~~~~~ 355 (392)
+. ....+.++++|+++.+
T Consensus 304 ~~---~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 304 NQ---NTDNATLYARDLTSGK 321 (347)
T ss_dssp ET---TTTEEEEEEECTTTCC
T ss_pred Ec---CCCcEEEEEEeCCCCe
Confidence 63 2345666777888877
No 61
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.24 E-value=0.24 Score=50.19 Aligned_cols=181 Identities=9% Similarity=-0.027 Sum_probs=98.9
Q ss_pred ceeeeeCCCCceeeCCCCCCC-CCcceEEee-cceEEee--cCcceEecCCcCceeecCCCCc-C-ccCceEEEEEcCCC
Q 016239 79 QSFAFDPASNSWFHLPPAQEP-RAGSCFIGA-NGFFFTT--TPRFGFSRILNTSWHLTSPLRF-S-RINPLVGVFYDHDR 152 (392)
Q Consensus 79 ~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~~-~g~i~v~--gg~~~ynp~~~~~W~~~~~~~~-~-r~~~~~~~~~~~~~ 152 (392)
.++.||+.++++........+ ..-.+++.. +|.|++. +|.++||+. +++|........ . .......+..+.
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~-~~~~~~~~~~~~~~~~~~~i~~i~~d~-- 504 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLA-SKKVIHHYDTSNSQLLENFVRSIAQDS-- 504 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESS-SSSCCEEECTTTSSCSCSCEEEEEECT--
T ss_pred CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCC-CCeEEecccCcccccccceeEEEEEcC--
Confidence 467788888887766432111 111233333 6788776 467899998 677765543221 0 012222233232
Q ss_pred CcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEE
Q 016239 153 GHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVF 230 (392)
Q Consensus 153 ~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~ 230 (392)
++.|++.... ..+.+||+.+++++..... ...... ....+.. +|.|++.
T Consensus 505 ------------~g~lWigt~~------------~Gl~~~~~~~~~~~~~~~~-~~l~~~----~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 505 ------------EGRFWIGTFG------------GGVGIYTPDMQLVRKFNQY-EGFCSN----TINQIYRSSKGQMWLA 555 (781)
T ss_dssp ------------TCCEEEEESS------------SCEEEECTTCCEEEEECTT-TTCSCS----CEEEEEECTTSCEEEE
T ss_pred ------------CCCEEEEEcC------------CCEEEEeCCCCeEEEccCC-CCCCCC----eeEEEEECCCCCEEEE
Confidence 6677775321 1377889888888766431 111111 1222333 5677665
Q ss_pred eecccEEEEEECCCCceeecccCC--CCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecc
Q 016239 231 GIYSFSVSSFDLKKHVWSEVQTLR--PPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 231 gg~~~~i~~yd~~~~~W~~i~~~~--~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~ 300 (392)
+. .+-+..||+.++++....... +.......+...+|+|++.+ ...+.+||+.+.+++...
T Consensus 556 T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--------~~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 556 TG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--------NTGISCYITSKKCFYTYD 618 (781)
T ss_dssp ET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--------SSCEEEEETTTTEEEEEC
T ss_pred EC-CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--------CCceEEEECCCCceEEec
Confidence 43 333399999999887764321 11222222233478888865 224667899888876654
No 62
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.19 E-value=0.66 Score=41.59 Aligned_cols=23 Identities=9% Similarity=0.280 Sum_probs=15.7
Q ss_pred CCE-EEEEeecccEEEEEECCCCc
Q 016239 224 RGR-FYVFGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 224 ~g~-ly~~gg~~~~i~~yd~~~~~ 246 (392)
+|+ +|+.+...+.|..|+...+.
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNA 188 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTC
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCC
Confidence 554 77776556788888776544
No 63
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.14 E-value=0.57 Score=40.42 Aligned_cols=187 Identities=12% Similarity=0.034 Sum_probs=91.8
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCC---CC-CCcceEEe--ecceEEeecC-----cceEecCCcCcee
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQ---EP-RAGSCFIG--ANGFFFTTTP-----RFGFSRILNTSWH 130 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~-r~~~~~~~--~~g~i~v~gg-----~~~ynp~~~~~W~ 130 (392)
.+.+|+....+ ..+..||+.......+.... .. .....++. .+|.+|+.+. +.+||+. ...-.
T Consensus 40 ~g~l~v~~~~~-----~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~~~ 113 (286)
T 1q7f_A 40 QNDIIVADTNN-----HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQFVR 113 (286)
T ss_dssp TCCEEEEEGGG-----TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCEEE
T ss_pred CCCEEEEECCC-----CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcEEE
Confidence 44566653322 45788888754433333211 00 11224444 3788888762 3678854 33322
Q ss_pred ecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCC
Q 016239 131 LTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFR 210 (392)
Q Consensus 131 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~ 210 (392)
.+.... . .......+ +. ++++|+.... ...+.+||+........... ....
T Consensus 114 ~~~~~~-~-~~~~~i~~-~~--------------~g~l~v~~~~-----------~~~i~~~~~~g~~~~~~~~~-~~~~ 164 (286)
T 1q7f_A 114 KFGATI-L-QHPRGVTV-DN--------------KGRIIVVECK-----------VMRVIIFDQNGNVLHKFGCS-KHLE 164 (286)
T ss_dssp EECTTT-C-SCEEEEEE-CT--------------TSCEEEEETT-----------TTEEEEECTTSCEEEEEECT-TTCS
T ss_pred EecCcc-C-CCceEEEE-eC--------------CCCEEEEECC-----------CCEEEEEcCCCCEEEEeCCC-CccC
Confidence 222111 0 11111222 22 5678887532 12588888755433333211 1101
Q ss_pred CCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEE-eeCCeEEEEEeecCCCCCceeEE
Q 016239 211 SGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLI-ASPNMLVLAGMCNAPRGPSFNLW 287 (392)
Q Consensus 211 ~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~-~~~g~l~v~gg~~~~~~~~~~v~ 287 (392)
. ...+.+ +|.+|+.....+.|..||+..+....+..... ......++ ..+|+||+..... ...|.
T Consensus 165 ~------p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~-~~~p~~i~~d~~G~l~v~~~~~-----~~~i~ 232 (286)
T 1q7f_A 165 F------PNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI-TNYPIGVGINSNGEILIADNHN-----NFNLT 232 (286)
T ss_dssp S------EEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTT-SCSEEEEEECTTCCEEEEECSS-----SCEEE
T ss_pred C------cEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCc-cCCCcEEEECCCCCEEEEeCCC-----CEEEE
Confidence 1 233333 58899987777899999987654444432111 01112233 3478898876421 11455
Q ss_pred EeecCccc
Q 016239 288 KVDELSME 295 (392)
Q Consensus 288 ~~d~~~~~ 295 (392)
+||.+...
T Consensus 233 ~~~~~g~~ 240 (286)
T 1q7f_A 233 IFTQDGQL 240 (286)
T ss_dssp EECTTSCE
T ss_pred EECCCCCE
Confidence 55866543
No 64
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.08 E-value=0.61 Score=40.23 Aligned_cols=174 Identities=10% Similarity=0.012 Sum_probs=88.4
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec----CcceEecCCcCceeecCCCCcCccCceEEEEEcCCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT----PRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDR 152 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g----g~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 152 (392)
..+..||+. ++...............++.. +|.+|+.. +++++|+. ++..... ++..-.. ...+..+.
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~-~~~~~~~-~~~i~~d~-- 155 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTIYEYD-LPNKGSY-PAFITLGS-- 155 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--SCEEEEE-CSSTTCC-EEEEEECT--
T ss_pred CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC--CCEEEcc-CCCCCCC-ceeEEECC--
Confidence 457888888 665443221111222344443 77888864 24788876 3333221 1111111 11222222
Q ss_pred CcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEE
Q 016239 153 GHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVF 230 (392)
Q Consensus 153 ~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~ 230 (392)
++++|+.... ...+.+||+ +++..... .+..... ...+.+ +|.+|+.
T Consensus 156 ------------~g~l~v~~~~-----------~~~i~~~~~-~g~~~~~~-~~~~~~~------~~~i~~d~~g~l~v~ 204 (300)
T 2qc5_A 156 ------------DNALWFTENQ-----------NNSIGRITN-TGKLEEYP-LPTNAAA------PVGITSGNDGALWFV 204 (300)
T ss_dssp ------------TSSEEEEETT-----------TTEEEEECT-TCCEEEEE-CSSTTCC------EEEEEECTTSSEEEE
T ss_pred ------------CCCEEEEecC-----------CCeEEEECC-CCcEEEee-CCCCCCC------cceEEECCCCCEEEE
Confidence 5678876421 125888888 66665432 1221111 233333 5789988
Q ss_pred eecccEEEEEECCCCceeecccCCCCcccceeEE-eeCCeEEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 231 GIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLI-ASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 231 gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~-~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
....+.|..||+ ++++........ ......++ .-+|+||+.... ...|.++|+. .+...
T Consensus 205 ~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~~-g~~~~ 264 (300)
T 2qc5_A 205 EIMGNKIGRITT-TGEISEYDIPTP-NARPHAITAGKNSEIWFTEWG------ANQIGRITND-NTIQE 264 (300)
T ss_dssp ETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEE
T ss_pred ccCCCEEEEEcC-CCcEEEEECCCC-CCCceEEEECCCCCEEEeccC------CCeEEEECCC-CcEEE
Confidence 766678999999 566655432211 11112233 337888887621 2456677874 44443
No 65
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.08 E-value=0.58 Score=39.95 Aligned_cols=184 Identities=10% Similarity=-0.011 Sum_probs=86.9
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeecC---cceEecCCc-CceeecCCCCcCccCceEEEEEcCCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTTP---RFGFSRILN-TSWHLTSPLRFSRINPLVGVFYDHDR 152 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~gg---~~~ynp~~~-~~W~~~~~~~~~r~~~~~~~~~~~~~ 152 (392)
..++.+|+.+++...+...... -.+++.. +|..+++++ ++++|.. + ++...+........-..+...
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~--v~~~~~spdg~~l~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~s----- 93 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPEL--FEAPNWSPDGKYLLLNSEGLLYRLSLA-GDPSPEKVDTGFATICNNDHGIS----- 93 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSC--CEEEEECTTSSEEEEEETTEEEEEESS-SCCSCEECCCTTCCCBCSCCEEC-----
T ss_pred eeEEEEeCCCCceeeeccCCcc--eEeeEECCCCCEEEEEcCCeEEEEeCC-CCCCceEeccccccccccceEEC-----
Confidence 5678888887776544322111 1122222 444333322 3678887 5 555444322211111112121
Q ss_pred CcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-CCE-EEEE
Q 016239 153 GHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-RGR-FYVF 230 (392)
Q Consensus 153 ~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~g~-ly~~ 230 (392)
. +++.+++++.. ......++.++..++.-+.+...... ...... +++ |++.
T Consensus 94 ----------p-dg~~l~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 94 ----------P-DGALYAISDKV-------EFGKSAIYLLPSTGGTPRLMTKNLPS---------YWHGWSPDGKSFTYC 146 (297)
T ss_dssp ----------T-TSSEEEEEECT-------TTSSCEEEEEETTCCCCEECCSSSSE---------EEEEECTTSSEEEEE
T ss_pred ----------C-CCCEEEEEEeC-------CCCcceEEEEECCCCceEEeecCCCc---------cceEECCCCCEEEEE
Confidence 1 45555554421 11234788888777665444321110 222222 444 5545
Q ss_pred eeccc--EEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 231 GIYSF--SVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 231 gg~~~--~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
+...+ .|+.+|..+.....+..... .........+++.+++.+... ....+|.++..+.....+..
T Consensus 147 ~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~---~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 147 GIRDQVFDIYSMDIDSGVETRLTHGEG--RNDGPDYSPDGRWIYFNSSRT---GQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EEETTEEEEEEEETTTCCEEECCCSSS--CEEEEEECTTSSEEEEEECTT---SSCEEEEEETTSSCEEECCC
T ss_pred ECCCCceEEEEEECCCCcceEcccCCC--ccccceECCCCCEEEEEecCC---CCccEEEECCCCCCcEEEec
Confidence 55444 56666777666555433221 111222233666555443221 16789998877666555543
No 66
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.07 E-value=0.0027 Score=62.15 Aligned_cols=36 Identities=25% Similarity=0.439 Sum_probs=29.4
Q ss_pred CcccCCcHHHHHHHHhhCC-hhhHHHhhccchhhhhh
Q 016239 8 SAFTTLSTDITERILSLLP-IPTLIRASSVCKSWRSI 43 (392)
Q Consensus 8 ~~~~~Lp~dl~~~iL~rLP-~~~l~~~~~v~k~W~~l 43 (392)
..|..||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4699999999999999999 99999999999999987
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.03 E-value=0.51 Score=41.29 Aligned_cols=105 Identities=19% Similarity=0.213 Sum_probs=55.1
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
++.+++.|+.+ ..+.+||..+++-... ++.. ... ...+.+ ++.+++.|+..+.|..||+
T Consensus 118 ~~~~l~s~~~d-----------~~i~iwd~~~~~~~~~--~~~~-~~~-----v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 118 QSNLIVSGSFD-----------ESVRIWDVKTGKCLKT--LPAH-SDP-----VSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp SSSEEEEEETT-----------SCEEEEETTTCCEEEE--ECCC-SSC-----EEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCEEEEEeCC-----------CcEEEEECCCCEEEEE--ecCC-CCc-----EEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 45566666541 2588889876543211 1111 111 222333 5778888888899999999
Q ss_pred CCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 243 KKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
.+.+-...-...............+++.++.++.++ .+.+| |..+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~iw--d~~~~ 224 (312)
T 4ery_A 179 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN----TLKLW--DYSKG 224 (312)
T ss_dssp TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT----EEEEE--ETTTT
T ss_pred CCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC----eEEEE--ECCCC
Confidence 876543221111111111112233677777765433 67777 55443
No 68
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.01 E-value=0.29 Score=49.60 Aligned_cols=179 Identities=10% Similarity=0.095 Sum_probs=96.6
Q ss_pred CceeeeeCCCCceeeCCCCCC--CCCc-ceEEee-cceEEee--cCcceEecCCcCceeecCCCC--cC-ccCceEEEEE
Q 016239 78 NQSFAFDPASNSWFHLPPAQE--PRAG-SCFIGA-NGFFFTT--TPRFGFSRILNTSWHLTSPLR--FS-RINPLVGVFY 148 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~--~r~~-~~~~~~-~g~i~v~--gg~~~ynp~~~~~W~~~~~~~--~~-r~~~~~~~~~ 148 (392)
..+..||+.++++........ +... .+++.. +|.|++. +|.++||+. +++|+...... .. ..........
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~i~~ 505 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPE-QRSFTTIEKEKDGTPVVSKQITTLFR 505 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETT-TTEEEECCBCTTCCBCCCCCEEEEEE
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCC-CCeEEEccccccccccCCceEEEEEE
Confidence 346778888877766543211 1111 123322 6777776 467999998 78887765331 11 1112222232
Q ss_pred cCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCC--CCCCCCCCCccceeeEEE--C
Q 016239 149 DHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPL--PADFRSGYSSQYLSSALF--R 224 (392)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~--~~~~~~~~~~~~~~~~~~--~ 224 (392)
+. ++.+++.... .+.+||+.++++ ..... ....... ...+... +
T Consensus 506 d~--------------~g~lWigt~~-------------Gl~~~~~~~~~~-~~~~~~~~~~l~~~----~i~~i~~d~~ 553 (795)
T 4a2l_A 506 DS--------------HKRLWIGGEE-------------GLSVFKQEGLDI-QKASILPVSNVTKL----FTNCIYEASN 553 (795)
T ss_dssp CT--------------TCCEEEEESS-------------CEEEEEEETTEE-EECCCSCSCGGGGS----CEEEEEECTT
T ss_pred CC--------------CCCEEEEeCC-------------ceEEEeCCCCeE-EEecCCCCCCCCCC----eeEEEEECCC
Confidence 22 6777775421 377788877776 32211 0000000 1222333 4
Q ss_pred CEEEEEeecccEEEEEECCCCceeecccCC--CCcccceeEEe-eCCeEEEEEeecCCCCCceeEEEeecCccceEecc
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSEVQTLR--PPGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~--~~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~ 300 (392)
|.|++-+. . -|..||+.++++....... +... ..+++. .+|+|++.+ ...+.+||+.+.+++...
T Consensus 554 g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t--------~~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 554 GIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLST--------NRGISCFNPETEKFRNFT 621 (795)
T ss_dssp SCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEE--------TTEEEEEETTTTEEEEEC
T ss_pred CCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEc--------CCceEEEcCCCCcEEEcC
Confidence 67766443 3 6999999999888764321 1122 223333 368888876 234667799888877554
No 69
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.94 E-value=0.43 Score=42.07 Aligned_cols=75 Identities=12% Similarity=0.088 Sum_probs=44.9
Q ss_pred EEEEEeecccEEEEEECC--CCceeecccCCCCcccceeEEeeCCe-EEEEEeecCCCCCceeEEEeecCccceEecccC
Q 016239 226 RFYVFGIYSFSVSSFDLK--KHVWSEVQTLRPPGVMFSFLIASPNM-LVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIM 302 (392)
Q Consensus 226 ~ly~~gg~~~~i~~yd~~--~~~W~~i~~~~~~~~~~~~~~~~~g~-l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~ 302 (392)
.||+.+...+.|..||+. +++++.+...+....-.......+|+ ||+.+... ..+.+|.+|..+.+++.+..+
T Consensus 244 ~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKS----HHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTT----CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCC----CeEEEEEEcCCCceeeEcccc
Confidence 677776667889999987 55666654433222211222233565 44443222 278899999888888877665
Q ss_pred CH
Q 016239 303 PH 304 (392)
Q Consensus 303 p~ 304 (392)
+.
T Consensus 320 ~~ 321 (343)
T 1ri6_A 320 AV 321 (343)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 70
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.94 E-value=0.69 Score=40.67 Aligned_cols=215 Identities=13% Similarity=0.046 Sum_probs=102.9
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec----C--cceEecCCcCceeecCC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT----P--RFGFSRILNTSWHLTSP 134 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g----g--~~~ynp~~~~~W~~~~~ 134 (392)
++.+|+.... ...++.+|+..+.-.... . +...++++.. +|.+|+.. + ++++|+. +++.+.+..
T Consensus 42 ~g~lyv~d~~-----~~~I~~~d~~g~~~~~~~-~--~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~~~~~~~ 112 (306)
T 2p4o_A 42 DGTIFVTNHE-----VGEIVSITPDGNQQIHAT-V--EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGTVETLLT 112 (306)
T ss_dssp TSCEEEEETT-----TTEEEEECTTCCEEEEEE-C--SSEEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSCEEEEEE
T ss_pred CCCEEEEeCC-----CCeEEEECCCCceEEEEe-C--CCCceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCeEEEEEe
Confidence 4456665321 246788888764322111 1 1122344443 67788774 2 4677877 566665544
Q ss_pred CCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCC---CeecCCC----CC-
Q 016239 135 LRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSD---SWELCPP----LP- 206 (392)
Q Consensus 135 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~----~~- 206 (392)
.+..+.....+.. . ++.+|+.-.. ...++++|+.++ .|..-+. .+
T Consensus 113 ~~~~~~~~g~~~~--~--------------~~~~~v~d~~-----------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~ 165 (306)
T 2p4o_A 113 LPDAIFLNGITPL--S--------------DTQYLTADSY-----------RGAIWLIDVVQPSGSIWLEHPMLARSNSE 165 (306)
T ss_dssp CTTCSCEEEEEES--S--------------SSEEEEEETT-----------TTEEEEEETTTTEEEEEEECGGGSCSSTT
T ss_pred CCCccccCccccc--C--------------CCcEEEEECC-----------CCeEEEEeCCCCcEeEEEECCcccccccc
Confidence 4433333233222 1 4556665311 125778887653 2211100 11
Q ss_pred CCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC-CceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCcee
Q 016239 207 ADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK-HVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFN 285 (392)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~-~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~ 285 (392)
..... ......-++.||+.....+.|.+||+.. .+............-....+..+|+||+.... ...
T Consensus 166 ~~~~~-----pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~------~~~ 234 (306)
T 2p4o_A 166 SVFPA-----ANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHI------YNS 234 (306)
T ss_dssp CCSCS-----EEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBT------TCC
T ss_pred CCCCc-----CCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCC------CCe
Confidence 11011 1222233458999887778999999875 22211111000001111123347889887532 235
Q ss_pred EEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEe-----CCEEEEEec
Q 016239 286 LWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGL-----GNLIYVFNE 336 (392)
Q Consensus 286 v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~v~gg 336 (392)
|.++|++. +...+...+... ....+++.. ++.|||...
T Consensus 235 V~~~~~~G-~~~~~~~~~~~~------------~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 235 VVRIAPDR-STTIIAQAEQGV------------IGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECTTC-CEEEEECGGGTC------------TTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEECCCC-CEEEEeeccccc------------CCceEEEEecccCCCCEEEEECC
Confidence 66778764 333333332211 123444443 378999875
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.90 E-value=0.6 Score=43.23 Aligned_cols=104 Identities=11% Similarity=0.169 Sum_probs=56.8
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++.+++.|+.+ ..+.+||..+++-... +... ... ...+.+++..++.|+.++.|..||..+
T Consensus 182 ~~~~l~sg~~d-----------g~i~vwd~~~~~~~~~--~~~h-~~~-----v~~l~~~~~~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 182 DERVIITGSSD-----------STVRVWDVNTGEMLNT--LIHH-CEA-----VLHLRFNNGMMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp CSSEEEEEETT-----------SCEEEEESSSCCEEEE--ECCC-CSC-----EEEEECCTTEEEEEETTSCEEEEECSS
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCcEEEE--EcCC-CCc-----EEEEEEcCCEEEEeeCCCcEEEEeCCC
Confidence 45666666641 2588888877653221 1111 111 344455677788888889999999987
Q ss_pred Cceeec-ccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 245 HVWSEV-QTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 245 ~~W~~i-~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
..-... ........... .+..+++.++.|+.++ .+.+| |..+.
T Consensus 243 ~~~~~~~~~~~~~~~~v~-~~~~~~~~l~s~~~dg----~i~vw--d~~~~ 286 (435)
T 1p22_A 243 PTDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDR----TIKVW--NTSTC 286 (435)
T ss_dssp SSCCEEEEEECCCSSCEE-EEEEETTEEEEEETTS----EEEEE--ETTTC
T ss_pred CCCceeeeEecCCCCcEE-EEEeCCCEEEEEeCCC----eEEEE--ECCcC
Confidence 643211 11111111112 2334677777765433 67777 66554
No 72
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.90 E-value=0.85 Score=42.43 Aligned_cols=92 Identities=12% Similarity=0.134 Sum_probs=53.4
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeC
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASP 267 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~ 267 (392)
.+.+||..+++-. ..+... ... ...+..++...+.|+.++.|..||+.+..-..... ............+
T Consensus 333 ~i~vwd~~~~~~~--~~~~~h-~~~-----v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~ 402 (464)
T 3v7d_B 333 TIRIWDLENGELM--YTLQGH-TAL-----VGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVS 402 (464)
T ss_dssp CEEEEETTTTEEE--EEECCC-SSC-----EEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEEC
T ss_pred cEEEEECCCCcEE--EEEeCC-CCc-----EEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec--CCCCccEEEEEeC
Confidence 5888998765422 111111 111 44556678888888888999999998764222111 1111222234557
Q ss_pred CeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 268 NMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 268 g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
+++++.|+ ++ .+.+| |..+.+-
T Consensus 403 ~~~l~~~~-dg----~i~iw--d~~~g~~ 424 (464)
T 3v7d_B 403 DNILVSGS-EN----QFNIY--NLRSGKL 424 (464)
T ss_dssp SSEEEEEE-TT----EEEEE--ETTTCCE
T ss_pred CCEEEEec-CC----eEEEE--ECCCCcE
Confidence 78777776 32 67888 6666543
No 73
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.90 E-value=0.84 Score=40.30 Aligned_cols=192 Identities=11% Similarity=0.017 Sum_probs=93.7
Q ss_pred CCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec--------CcceEecCCcCcee-
Q 016239 61 PRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT--------PRFGFSRILNTSWH- 130 (392)
Q Consensus 61 ~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g--------g~~~ynp~~~~~W~- 130 (392)
.++.+++.+... ..++.||+.+++...+.... ...-.+++.. +|.+|+.+ +++++|+. +++..
T Consensus 54 ~~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~-~~~~~~ 126 (333)
T 2dg1_A 54 RQGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN-GDNLQD 126 (333)
T ss_dssp TTSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-SCSCEE
T ss_pred CCCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC-CCEEEE
Confidence 344566654322 46888999888776543111 1112234443 67777763 46788987 55543
Q ss_pred ecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCC
Q 016239 131 LTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFR 210 (392)
Q Consensus 131 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~ 210 (392)
.+...... .......+ +. ++++|+...... .......++.+|+.+++.+.+..-. .
T Consensus 127 ~~~~~~~~-~~~~~i~~-d~--------------~g~l~v~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~---~ 182 (333)
T 2dg1_A 127 IIEDLSTA-YCIDDMVF-DS--------------KGGFYFTDFRGY-----STNPLGGVYYVSPDFRTVTPIIQNI---S 182 (333)
T ss_dssp EECSSSSC-CCEEEEEE-CT--------------TSCEEEEECCCB-----TTBCCEEEEEECTTSCCEEEEEEEE---S
T ss_pred EEccCccC-CcccceEE-CC--------------CCCEEEEecccc-----ccCCCceEEEEeCCCCEEEEeecCC---C
Confidence 22221111 11111222 22 567887543210 0112346888888776655442100 1
Q ss_pred CCCCccceeeEEE--CC-EEEEEeecccEEEEEECCCC--ceeecc-----cCCCCcccceeEEeeCCeEEEEEeecCCC
Q 016239 211 SGYSSQYLSSALF--RG-RFYVFGIYSFSVSSFDLKKH--VWSEVQ-----TLRPPGVMFSFLIASPNMLVLAGMCNAPR 280 (392)
Q Consensus 211 ~~~~~~~~~~~~~--~g-~ly~~gg~~~~i~~yd~~~~--~W~~i~-----~~~~~~~~~~~~~~~~g~l~v~gg~~~~~ 280 (392)
. .....+ +| .||+.....+.|..||+.++ ....+. .......-....+..+|+||+....
T Consensus 183 ~------~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~---- 252 (333)
T 2dg1_A 183 V------ANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG---- 252 (333)
T ss_dssp S------EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET----
T ss_pred c------ccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC----
Confidence 1 222223 44 58887766678999998542 232211 1111111111223337888886532
Q ss_pred CCceeEEEeecCccc
Q 016239 281 GPSFNLWKVDELSME 295 (392)
Q Consensus 281 ~~~~~v~~~d~~~~~ 295 (392)
...|++||++...
T Consensus 253 --~~~v~~~d~~g~~ 265 (333)
T 2dg1_A 253 --QGRVLVFNKRGYP 265 (333)
T ss_dssp --TTEEEEECTTSCE
T ss_pred --CCEEEEECCCCCE
Confidence 2345666886543
No 74
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.88 E-value=0.53 Score=40.88 Aligned_cols=230 Identities=12% Similarity=-0.012 Sum_probs=110.1
Q ss_pred CceeeeeCCCCc--eeeCCCCCCCCCcceEEeecceEEeecC--cceEecCCcCceeecCCCCcCccCceEEEEEcCCCC
Q 016239 78 NQSFAFDPASNS--WFHLPPAQEPRAGSCFIGANGFFFTTTP--RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRG 153 (392)
Q Consensus 78 ~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~g~i~v~gg--~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~ 153 (392)
..+.++|+++++ |+.-..-. ...+...+..+|.+++.+. +..+|+.-...|+.-.+. ....+++....
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~--~~~~~~~~~~~----- 86 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPA--GCEMQTARILP----- 86 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCT--TCEEEEEEECT-----
T ss_pred CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCC--CccccccEECC-----
Confidence 567888987766 54322110 1112223334777777533 478898522266643321 11112222221
Q ss_pred cccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCC-CeecCC--CCCCCCCCCCCccceeeEEECCEEEEE
Q 016239 154 HCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSD-SWELCP--PLPADFRSGYSSQYLSSALFRGRFYVF 230 (392)
Q Consensus 154 ~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~-~W~~~~--~~~~~~~~~~~~~~~~~~~~~g~ly~~ 230 (392)
++++++.... ....+..+|+..+ .|+... ..+...... .......+|.+++.
T Consensus 87 -----------dG~~lv~~~~----------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~----~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 87 -----------DGNALVAWCG----------HPSTILEVNMKGEVLSKTEFETGIERPHAQF----RQINKNKKGNYLVP 141 (276)
T ss_dssp -----------TSCEEEEEES----------TTEEEEEECTTSCEEEEEEECCSCSSGGGSC----SCCEECTTSCEEEE
T ss_pred -----------CCCEEEEecC----------CCCEEEEEeCCCCEEEEEeccCCCCcccccc----cCceECCCCCEEEE
Confidence 5666665432 0125667776433 243221 111100000 01223346777777
Q ss_pred eecccEEEEEECCCC-ceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc--ceEeccc-CCHHH
Q 016239 231 GIYSFSVSSFDLKKH-VWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM--EFSEIAI-MPHDF 306 (392)
Q Consensus 231 gg~~~~i~~yd~~~~-~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~--~W~~~~~-~p~~~ 306 (392)
....+.|.+||++-+ .|+.-....+ .......+|.+++.+.. ...|..+|+++. .|+.-.. ++...
T Consensus 142 ~~~~~~v~~~d~~G~~~w~~~~~~~~----~~~~~~~~g~~~v~~~~------~~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 142 LFATSEVREIAPNGQLLNSVKLSGTP----FSSAFLDNGDCLVACGD------AHCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp ETTTTEEEEECTTSCEEEEEECSSCC----CEEEECTTSCEEEECBT------TSEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred ecCCCEEEEECCCCCEEEEEECCCCc----cceeEcCCCCEEEEeCC------CCeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 666789999999732 4554332111 22334457888887643 224667788743 3665321 22110
Q ss_pred HHhhcCCcccCccceeEEEEeCCEEEEEeccccC-----CCCeEEEEeecCCCccceeeeec
Q 016239 307 LYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHK-----KYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~-----~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
+ ..-.......++.+||.....+. .....++++|++-+ -.|+.-
T Consensus 212 l----------~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~---~~W~~~ 260 (276)
T 3no2_A 212 L----------FFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK---VVWQLN 260 (276)
T ss_dssp C----------SEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB---EEEEEC
T ss_pred c----------cccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC---EEEEec
Confidence 0 01133444678899998731111 02334677866333 248753
No 75
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.79 E-value=1.7 Score=44.02 Aligned_cols=186 Identities=11% Similarity=0.157 Sum_probs=97.3
Q ss_pred ceeeeeCCCCceeeCCCCCCCCCcceEEe-ecceEEeec---CcceEecCCcCceeecCCCC---cCc-cCceEEEEEcC
Q 016239 79 QSFAFDPASNSWFHLPPAQEPRAGSCFIG-ANGFFFTTT---PRFGFSRILNTSWHLTSPLR---FSR-INPLVGVFYDH 150 (392)
Q Consensus 79 ~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~g~i~v~g---g~~~ynp~~~~~W~~~~~~~---~~r-~~~~~~~~~~~ 150 (392)
.++.||+.++++......+....-.++.. .+|.|++.. |.++||+. +++++.....+ ... ...-.++..+.
T Consensus 194 Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~-~~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 272 (795)
T 4a2l_A 194 GLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPK-TKEIKNYLHSPSNPKSISSNYIRSLAMDS 272 (795)
T ss_dssp CEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETT-TTEEEEECCCTTCTTSCSCSBEEEEEECT
T ss_pred CEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCC-CCeEEEeecCCCCccccCCCeEEEEEEcC
Confidence 47889998888876643221111122332 377788763 67999998 67776543221 111 11122222222
Q ss_pred CCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEE
Q 016239 151 DRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFY 228 (392)
Q Consensus 151 ~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly 228 (392)
++.+++.. . . .+.+||+.++.++.....+...... +......... +|.|+
T Consensus 273 --------------~g~lWigt-~-----------~-Gl~~~~~~~~~~~~~~~~~~~~~~l-~~~~i~~i~~D~~g~lW 324 (795)
T 4a2l_A 273 --------------QNRLWIGT-F-----------N-DLNIYHEGTDSFASYSSNPVENGSL-SQRSVRSIFMDSQGGMW 324 (795)
T ss_dssp --------------TSCEEEEE-S-----------S-CEEEEETTTTEEEEECCCTTSTTSC-SSSCEEEEEECTTSCEE
T ss_pred --------------CCCEEEEe-C-----------C-hhheEcCCCCeEEEEecCCCCCCCC-CCCcEEEEEEeCCcCEE
Confidence 56666642 1 1 4778899888887764322110000 0001122222 45555
Q ss_pred EEeecccEEEEEECCCCceeecccCCC----CcccceeEEe-eCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 229 VFGIYSFSVSSFDLKKHVWSEVQTLRP----PGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 229 ~~gg~~~~i~~yd~~~~~W~~i~~~~~----~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
+|...+-|..||+.++.++.....+. ......+++. .+|.|++.. . ...+..||+.+.+++....
T Consensus 325 -igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt-~------~~Gl~~~~~~~~~~~~~~~ 394 (795)
T 4a2l_A 325 -LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGT-N------DGGLNLYNPITQRFTSYTL 394 (795)
T ss_dssp -EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEE-S------SSCEEEECTTTCCEEEECC
T ss_pred -EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEE-C------CCCeEEEcCCCCcEEEEec
Confidence 45555679999998888876643221 1111222333 267888743 1 1245667988888876653
No 76
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.61 E-value=0.85 Score=43.97 Aligned_cols=243 Identities=9% Similarity=-0.023 Sum_probs=107.5
Q ss_pred cCCcHHHHHHHHhhCC---h-hhHHHhhccchhhhhhhcCcchhhHhhhccCCCCCCEEEEEcccCCCCCCCceeeeeCC
Q 016239 11 TTLSTDITERILSLLP---I-PTLIRASSVCKSWRSIISAPSFSALIAHNTNASPRPWFFLFGLHNTSSRNNQSFAFDPA 86 (392)
Q Consensus 11 ~~Lp~dl~~~iL~rLP---~-~~l~~~~~v~k~W~~l~~~~~f~~~~~~~~~~~~~~~l~~~gg~~~~~~~~~~~~yd~~ 86 (392)
..|.++-+..|.+.|- . ...+....+.+.|..+.........- .......+.+|+.+... ..+..+|..
T Consensus 95 ~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~--~~~~~p~~~~~vs~~~d-----~~V~v~D~~ 167 (543)
T 1nir_A 95 GELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKKQ--LNDLDLPNLFSVTLRDA-----GQIALVDGD 167 (543)
T ss_dssp TSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCSSC--CSCCCGGGEEEEEEGGG-----TEEEEEETT
T ss_pred cCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCccc--ccccCCCCEEEEEEcCC-----CeEEEEECC
Confidence 5788888888876552 1 11122333444554333111000000 01223356677765533 457788988
Q ss_pred CCceeeCCCCCCCCCcceEEee--cceEEeecC---cceEec--CCcCceeecCCCCcCccCceEEEEEcCCCCcccccC
Q 016239 87 SNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP---RFGFSR--ILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLAS 159 (392)
Q Consensus 87 ~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg---~~~ynp--~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 159 (392)
+++.... ++.....+.++.. +..+|+.+. +.+||. . +.+- +..++....-..++ +
T Consensus 168 t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~-t~~~--~~~i~~g~~p~~va-~------------ 229 (543)
T 1nir_A 168 SKKIVKV--IDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAK-EPTK--VAEIKIGIEARSVE-S------------ 229 (543)
T ss_dssp TCCEEEE--EECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSS-SCEE--EEEEECCSEEEEEE-E------------
T ss_pred CceEEEE--EecCcccceEEECCCCCEEEEECCCCeEEEEECcCC-CCcE--EEEEecCCCcceEE-e------------
Confidence 7764321 1211113444333 446777653 477887 4 3322 22222221111222 2
Q ss_pred Cccc----CCCeEEEEeceeecCcccccccceEEEEEeCCCCCeec-CCC--CCCCCCCCCCccceeeEEE---CCEEEE
Q 016239 160 GFAC----NLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWEL-CPP--LPADFRSGYSSQYLSSALF---RGRFYV 229 (392)
Q Consensus 160 ~~~~----~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~--~~~~~~~~~~~~~~~~~~~---~g~ly~ 229 (392)
.. ++..+|+.... ..++.++|..+.+-.. ++. +...-...+.......+.. ++.+|+
T Consensus 230 --sp~~~~dg~~l~v~~~~-----------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 230 --SKFKGYEDRYTIAGAYW-----------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp --CCSTTCTTTEEEEEEEE-----------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred --CCCcCCCCCEEEEEEcc-----------CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 22 25567665432 1257788876654221 111 0000000000000222222 456777
Q ss_pred EeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 230 FGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 230 ~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
.....+.|..+|..+.+-..+...+....-......-+|+.+++..... ..+.+| |..+.+-
T Consensus 297 s~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~---~~v~v~--D~~tg~l 358 (543)
T 1nir_A 297 NVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS---NKVAVI--DSKDRRL 358 (543)
T ss_dssp EETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG---TEEEEE--ETTTTEE
T ss_pred EECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC---CeEEEE--ECCCCeE
Confidence 6666789999998775321111111111111222334666544443221 156666 8776643
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.60 E-value=1 Score=39.15 Aligned_cols=69 Identities=12% Similarity=0.071 Sum_probs=38.3
Q ss_pred CEEEEEeecccEEEEEECCCCc--eeecccCCCCcccceeEEe-eC---CeEEEEEeecCCCCCceeEEEeecCccceE
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHV--WSEVQTLRPPGVMFSFLIA-SP---NMLVLAGMCNAPRGPSFNLWKVDELSMEFS 297 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~--W~~i~~~~~~~~~~~~~~~-~~---g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~ 297 (392)
+.+++.|+.++.|..||..+.+ +..+..+.........+.. .+ +.+++.++.+. .+.+|.++.....|.
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~----~v~iWd~~~~~~~~~ 244 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR----TCIIWTQDNEQGPWK 244 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS----CEEEEEESSTTSCCE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC----cEEEEEeCCCCCccc
Confidence 4577888888888888876543 5444333221111112222 23 36666665443 789996654444454
No 78
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.57 E-value=1.3 Score=40.27 Aligned_cols=64 Identities=17% Similarity=0.178 Sum_probs=36.0
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCe-EEEEEeecCCCCCceeEEEeecCc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNM-LVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~-l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
++.+.+.|+..+.|..||+.+.+-...................++. +++.|+.++ .+.+| |..+
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg----~i~vw--d~~~ 322 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG----MLAQW--DLRS 322 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS----EEEEE--ETTC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC----eEEEE--EcCC
Confidence 6778888888889999999876532221111111111112223555 777776433 67777 5544
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.57 E-value=1.2 Score=39.68 Aligned_cols=74 Identities=15% Similarity=0.064 Sum_probs=43.7
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCC
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMP 303 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p 303 (392)
++..++.++.++.|..||..+.+-...-...... ........++++++.| .++ .+.+|.++....+|..+..+.
T Consensus 213 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~-~d~----~i~i~~~~~~~~~~~~~~~~~ 286 (372)
T 1k8k_C 213 NGSRVAWVSHDSTVCLADADKKMAVATLASETLP-LLAVTFITESSLVAAG-HDC----FPVLFTYDSAAGKLSFGGRLD 286 (372)
T ss_dssp SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCC-EEEEEEEETTEEEEEE-TTS----SCEEEEEETTTTEEEECCCCC
T ss_pred CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCC-eEEEEEecCCCEEEEE-eCC----eEEEEEccCcCceEEEeeccC
Confidence 5677778888889999999876532221111111 1122233477776666 322 678886554447788776654
No 80
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.57 E-value=0.87 Score=39.84 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=49.6
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA 265 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~ 265 (392)
.+.+||..+++....-.... .. ...+.+ ++..++.++..+.|..||+.+.+-....... .........
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~---~~-----i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~v~~~~~s 233 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHT---DG-----ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--SQIFSLGYC 233 (337)
T ss_dssp CEEEEETTTTEEEEEECCCS---SC-----EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEEC
T ss_pred cEEEEeCCCCceeeeeeccc---Cc-----eEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--CceEEEEEC
Confidence 58888887764332211111 11 223333 6778888888899999999876533321111 111122223
Q ss_pred eCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 266 SPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 266 ~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
.+++++++++.+. .+.+| |..+.+
T Consensus 234 ~~~~~l~~~~~~~----~i~~~--~~~~~~ 257 (337)
T 1gxr_A 234 PTGEWLAVGMESS----NVEVL--HVNKPD 257 (337)
T ss_dssp TTSSEEEEEETTS----CEEEE--ETTSSC
T ss_pred CCCCEEEEEcCCC----cEEEE--ECCCCC
Confidence 4677777775432 56666 655443
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.48 E-value=0.66 Score=46.71 Aligned_cols=115 Identities=10% Similarity=0.128 Sum_probs=64.3
Q ss_pred CeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--C--CEEEEEeecccEEEEEE
Q 016239 166 PKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--R--GRFYVFGIYSFSVSSFD 241 (392)
Q Consensus 166 ~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~--g~ly~~gg~~~~i~~yd 241 (392)
+..++.|+.+ ..+.+||..++.|..+..+... ... ...+.+ + +.+++.|+.++.|..||
T Consensus 67 ~~~l~s~s~D-----------g~I~vwd~~~~~~~~~~~~~~h-~~~-----V~~v~~sp~~~~~~l~sgs~dg~I~vwd 129 (753)
T 3jro_A 67 GTILASCSYD-----------GKVLIWKEENGRWSQIAVHAVH-SAS-----VNSVQWAPHEYGPLLLVASSDGKVSVVE 129 (753)
T ss_dssp CSEEEEEETT-----------SCEEEEEEETTEEEEEEEECCC-SSC-----EEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCEEEEEeCC-----------CeEEEEECCCCcccccccccCC-CCC-----eEEEEECCCCCCCEEEEEeCCCcEEEEE
Confidence 6677777652 2588888888877666543322 111 233333 3 77888899889999999
Q ss_pred CCCCceeecccCCCCcccceeEEee--------------CCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 242 LKKHVWSEVQTLRPPGVMFSFLIAS--------------PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 242 ~~~~~W~~i~~~~~~~~~~~~~~~~--------------~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
..+..-...............+... ++.+++.|+.++ .+.+|.+......+..+..
T Consensus 130 l~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg----~I~iwd~~~~~~~~~~~~~ 199 (753)
T 3jro_A 130 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN----LVKIWKYNSDAQTYVLEST 199 (753)
T ss_dssp CCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS----CEEEEEEETTTTEEEEEEE
T ss_pred eecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC----eEEEEeccCCcccceeeee
Confidence 9876322111111111111111111 366777776443 6888866555555555444
No 82
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.45 E-value=1.2 Score=39.41 Aligned_cols=103 Identities=11% Similarity=0.107 Sum_probs=56.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeec-CCCCCCCCCCCCCccceeeEE-ECCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWEL-CPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~i~~yd~ 242 (392)
+++.++.|+.+ ..+.+||..+++-.. +.....+ . .+.+. -++.+++.|+.++.|..||.
T Consensus 175 dg~~lasg~~d-----------g~i~iwd~~~~~~~~~~~~h~~~--v------~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 175 DGKYLASGAID-----------GIINIFDIATGKLLHTLEGHAMP--I------RSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTTEEEEEECCCSSC--C------CEEEECTTSCEEEEECTTSCEEEEET
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCcEEEEEcccCCc--e------eEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 56677776641 258889987764321 1111111 1 12222 26788888888889999999
Q ss_pred CCCceeecccCCCCcccceeE-EeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 243 KKHVWSEVQTLRPPGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
.+.+.... +.........+ ...++++++.|+.+. .+.+| |..+.
T Consensus 236 ~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~----~v~iw--d~~~~ 280 (321)
T 3ow8_A 236 QHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK----SVKVW--DVGTR 280 (321)
T ss_dssp TTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS----CEEEE--ETTTT
T ss_pred CCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC----cEEEE--eCCCC
Confidence 87654322 11111111122 223677777776543 68888 65544
No 83
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.34 E-value=0.12 Score=47.82 Aligned_cols=69 Identities=13% Similarity=0.151 Sum_probs=41.8
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
++++++.++.+ ..+.+||..+++.......... ... . .....+.+ ++.+++.++..+.|..||+
T Consensus 133 ~~~~~~~~~~~-----------~~i~~~d~~~g~~~~~~~~~~~-~~~-~-~~v~~~~~~~~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 133 NTRLAIPLLED-----------EGMDVLDINSGQTVRLSPPEKY-KKK-L-GFVETISIPEHNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SSEEEEEBTTS-----------SSEEEEETTTCCEEEECCCHHH-HTT-C-CEEEEEEEGGGTEEEEEEGGGTEEEEEET
T ss_pred CCeEEEEeCCC-----------CeEEEEECCCCeEeeecCcccc-ccc-C-CceeEEEEcCCCEEEEEECCCCEEEEEEC
Confidence 56777776541 2588999888766543221110 000 0 01222333 6889999888899999999
Q ss_pred CCCce
Q 016239 243 KKHVW 247 (392)
Q Consensus 243 ~~~~W 247 (392)
.+.+.
T Consensus 199 ~~~~~ 203 (433)
T 3bws_A 199 KTLAY 203 (433)
T ss_dssp TTCCE
T ss_pred CCceE
Confidence 87654
No 84
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.33 E-value=0.23 Score=50.08 Aligned_cols=177 Identities=11% Similarity=0.059 Sum_probs=88.5
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcc-eEEee-c--ceEEeecC----cceEecCCcCceeecCCCCcCccCceEEEEEc
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGS-CFIGA-N--GFFFTTTP----RFGFSRILNTSWHLTSPLRFSRINPLVGVFYD 149 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~--g~i~v~gg----~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~ 149 (392)
..+..||....++..+..+....... ++... + +..++.|+ +.+||.. +++|..+..+.........+.+.
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~-~~~~~~~~~~~~h~~~V~~v~~s- 108 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE-NGRWSQIAVHAVHSASVNSVQWA- 108 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEEC-
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC-CCcccccccccCCCCCeEEEEEC-
Confidence 35677787666665544443333222 23322 2 44555543 3678887 67665544443222222222221
Q ss_pred CCCCcccccCCcccCC--CeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE----
Q 016239 150 HDRGHCDLASGFACNL--PKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF---- 223 (392)
Q Consensus 150 ~~~~~~~~~~~~~~~~--~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (392)
+ + +.+++.|+.+ ..+.+||..++.-.....+... ... ...+.+
T Consensus 109 p--------------~~~~~~l~sgs~d-----------g~I~vwdl~~~~~~~~~~~~~~-~~~-----v~~l~~~p~~ 157 (753)
T 3jro_A 109 P--------------HEYGPLLLVASSD-----------GKVSVVEFKENGTTSPIIIDAH-AIG-----VNSASWAPAT 157 (753)
T ss_dssp C--------------GGGCSEEEEEETT-----------SEEEEEECCSSSCCCCEEEECC-SSC-----EEEEEECCCC
T ss_pred C--------------CCCCCEEEEEeCC-----------CcEEEEEeecCCCcceeEeecC-CCc-----eEEEEecCcc
Confidence 1 3 6777777652 2688888776532111111000 000 122222
Q ss_pred -----------CCEEEEEeecccEEEEEECCCC--ceeecccCCCCcccceeEE-eeC---CeEEEEEeecCCCCCceeE
Q 016239 224 -----------RGRFYVFGIYSFSVSSFDLKKH--VWSEVQTLRPPGVMFSFLI-ASP---NMLVLAGMCNAPRGPSFNL 286 (392)
Q Consensus 224 -----------~g~ly~~gg~~~~i~~yd~~~~--~W~~i~~~~~~~~~~~~~~-~~~---g~l~v~gg~~~~~~~~~~v 286 (392)
++.+++.|+.++.|..||..+. .+..+............+. ..+ +++++.|+.++ .+.+
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg----~I~i 233 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR----TCII 233 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS----CEEE
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC----EEEE
Confidence 3677888888889999988654 3333333222111122222 224 67887776543 6888
Q ss_pred EEeec
Q 016239 287 WKVDE 291 (392)
Q Consensus 287 ~~~d~ 291 (392)
|.++.
T Consensus 234 wd~~~ 238 (753)
T 3jro_A 234 WTQDN 238 (753)
T ss_dssp EEESS
T ss_pred ecCCC
Confidence 85544
No 85
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.33 E-value=1.4 Score=38.99 Aligned_cols=198 Identities=8% Similarity=-0.072 Sum_probs=99.7
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC----cceEecCCc----Cceeec-C-CCCcCccCceEE
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP----RFGFSRILN----TSWHLT-S-PLRFSRINPLVG 145 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg----~~~ynp~~~----~~W~~~-~-~~~~~r~~~~~~ 145 (392)
.++..+|+..+....+-+ ......+++.. ++.||+... .+++++. + .....+ + .+.. -.+++
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~---p~gla 83 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLD-RAHGVSSYDTVISRDIQA---PDGLA 83 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSC---CCEEE
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECC-CCCCCcccEEEEeCCCCC---cCEEE
Confidence 456778887766544321 11222345443 678998743 3677775 3 111211 1 1111 12333
Q ss_pred EEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEE
Q 016239 146 VFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALF 223 (392)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~ 223 (392)
+- . .++.||+.-.. ...++++|+....-+.+. .+..+ ...++.
T Consensus 84 vd--~-------------~~~~ly~~d~~-----------~~~I~~~~~~g~~~~~~~~~~~~~P---------~~iavd 128 (316)
T 1ijq_A 84 VD--W-------------IHSNIYWTDSV-----------LGTVSVADTKGVKRKTLFRENGSKP---------RAIVVD 128 (316)
T ss_dssp EE--T-------------TTTEEEEEETT-----------TTEEEEEETTSSSEEEEEECTTCCE---------EEEEEE
T ss_pred Ee--e-------------cCCeEEEEECC-----------CCEEEEEeCCCCceEEEEECCCCCc---------ceEEeC
Confidence 31 0 16789987422 226788887654333221 12111 333443
Q ss_pred --CCEEEEEeecc-cEEEEEECCCCceeecccCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 224 --RGRFYVFGIYS-FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 224 --~g~ly~~gg~~-~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
+|.||+..... +.|+++++....-+.+..... .....++.. +++||+.... ...|+++|.+...-+.
T Consensus 129 p~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~--~~P~gla~d~~~~~lY~~D~~------~~~I~~~d~dg~~~~~ 200 (316)
T 1ijq_A 129 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDSK------LHSISSIDVNGGNRKT 200 (316)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC--SCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEE
T ss_pred CCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCC--CCceEEEEeccCCEEEEEECC------CCeEEEEecCCCceEE
Confidence 68999986443 689999986543333321111 112233433 7899987632 3456666766543333
Q ss_pred cccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEec
Q 016239 299 IAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 299 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg 336 (392)
+...+... ....++++.++.||+...
T Consensus 201 ~~~~~~~~------------~~P~giav~~~~ly~~d~ 226 (316)
T 1ijq_A 201 ILEDEKRL------------AHPFSLAVFEDKVFWTDI 226 (316)
T ss_dssp EEECTTTT------------SSEEEEEEETTEEEEEET
T ss_pred EeecCCcc------------CCcEEEEEECCEEEEEEC
Confidence 32221111 125677778899999874
No 86
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.24 E-value=1.8 Score=39.83 Aligned_cols=101 Identities=9% Similarity=-0.019 Sum_probs=54.5
Q ss_pred eEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeec-c--cEEEEEECCCCceeecccCCCCcccce
Q 016239 187 LAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIY-S--FSVSSFDLKKHVWSEVQTLRPPGVMFS 261 (392)
Q Consensus 187 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~-~--~~i~~yd~~~~~W~~i~~~~~~~~~~~ 261 (392)
..++++|..+++...+...... ...+.+ +|+..++++. . ..|+.+|+.+.+-..+.... .....
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~---------~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~--~~~~~ 315 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSN---------NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEG--SQNQD 315 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSC---------EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSS--SEEEE
T ss_pred ceEEEEECCCCCEEeCcCCCCc---------ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCC--CcccC
Confidence 3689999988877655432211 222333 5654444433 2 27999999887644432211 11112
Q ss_pred eEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 262 FLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 262 ~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
.....+|+.++++..... ...|+.+|..+.+...+..
T Consensus 316 ~~~spdG~~l~~~~~~~g---~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 316 ADVSSDGKFMVMVSSNGG---QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp EEECTTSSEEEEEEECSS---CEEEEEEETTTCCEEECCC
T ss_pred eEECCCCCEEEEEECcCC---ceEEEEEECCCCCEEEecC
Confidence 223346776655543321 3567777888877665443
No 87
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.24 E-value=1.6 Score=39.17 Aligned_cols=94 Identities=12% Similarity=0.014 Sum_probs=48.8
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE---CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEE
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF---RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLI 264 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~---~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~ 264 (392)
.+.+||..+.+-......... .. ....+.+ ++.+++.|+..+.|..||+.+.+-.. ...........+.
T Consensus 205 ~v~~wd~~~~~~~~~~~~~~~-~~-----~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~--~~~~~~~~v~~l~ 276 (357)
T 4g56_B 205 RILLWDTRKPKPATRIDFCAS-DT-----IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ--TSAVHSQNITGLA 276 (357)
T ss_dssp CEEECCTTSSSCBCBCCCTTC-CS-----CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE--EECCCSSCEEEEE
T ss_pred ceEEEECCCCceeeeeeeccc-cc-----cccchhhhhcccceEEEeecccceeEEECCCCcEeE--EEeccceeEEEEE
Confidence 588888877653322221111 11 1233333 36788888888899999997754221 1111111112222
Q ss_pred e-eCC-eEEEEEeecCCCCCceeEEEeecCccc
Q 016239 265 A-SPN-MLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 265 ~-~~g-~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
. .++ ++++.|+.+. .+.|| |..+.+
T Consensus 277 ~sp~~~~~lasgs~D~----~i~iw--d~~~~~ 303 (357)
T 4g56_B 277 YSYHSSPFLASISEDC----TVAVL--DADFSE 303 (357)
T ss_dssp ECSSSSCCEEEEETTS----CEEEE--CTTSCE
T ss_pred EcCCCCCEEEEEeCCC----EEEEE--ECCCCc
Confidence 2 244 5666565433 67888 766554
No 88
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.22 E-value=3 Score=42.14 Aligned_cols=132 Identities=8% Similarity=-0.111 Sum_probs=74.5
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEE--CCEEEEEe-ecccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALF--RGRFYVFG-IYSFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~--~g~ly~~g-g~~~~i~~ 239 (392)
+++||+.-.. ...|++++.....-+.+. .+..+ .+.++. +|.|||.. |....|++
T Consensus 482 ~~~LY~tD~~-----------~~~I~v~~ldG~~~~~l~~~~l~~P---------~gIaVDp~~g~LYwtD~g~~~~I~~ 541 (791)
T 3m0c_C 482 HSNIYWTDSV-----------LGTVSVADTKGVKRKTLFRENGSKP---------RAIVVDPVHGFMYWTDWGTPAKIKK 541 (791)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTSSSEEEEEECTTCCE---------EEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCcEEEEecC-----------CCeEEEEeCCCCeEEEEEeCCCCCc---------ceEEEecCCCCEEEecCCCCCeEEE
Confidence 6789988432 236888888665544442 22121 333332 58999986 43468999
Q ss_pred EECCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccC
Q 016239 240 FDLKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDD 317 (392)
Q Consensus 240 yd~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~ 317 (392)
+++....-..+..... ..-..+++ .+++||+.-.. ...|+++|.+...=+.+..-...+
T Consensus 542 ~~~dG~~~~~lv~~~l--~~P~GLavD~~~~~LYwaD~~------~~~I~~~d~dG~~~~~v~~~~~~l----------- 602 (791)
T 3m0c_C 542 GGLNGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRL----------- 602 (791)
T ss_dssp EETTSCCEEEEECSSC--SCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEEECTTTT-----------
T ss_pred EecCCCceEEEEeCCC--CCceEEEEecCCCeEEEEeCC------CCcEEEEecCCCceEEEecCCCcc-----------
Confidence 9986554333322111 11122333 47899998531 345777777654433332211111
Q ss_pred ccceeEEEEeCCEEEEEec
Q 016239 318 KFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 318 ~~~~~~~~~~~~~i~v~gg 336 (392)
...+++++.+++||+...
T Consensus 603 -~~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 603 -AHPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp -SSEEEEEEETTEEEEEET
T ss_pred -CCCCEEEEeCCEEEEEEC
Confidence 135678889999999874
No 89
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.15 E-value=0.41 Score=43.11 Aligned_cols=106 Identities=15% Similarity=0.038 Sum_probs=53.6
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE---CCEEEEEeecccEEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF---RGRFYVFGIYSFSVSSFD 241 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~---~g~ly~~gg~~~~i~~yd 241 (392)
+..+++.|+.+ ..+.+||..+.+-...-..... ... ..++.+ ++.+++.|+.++.|..||
T Consensus 181 ~~~~l~s~s~D-----------~~v~iwd~~~~~~~~~~~~~~~-~~~-----~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 181 KDSVFLSCSED-----------NRILLWDTRCPKPASQIGCSAP-GYL-----PTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp CTTEEEEEETT-----------SCEEEEETTSSSCEEECC-----CCC-----EEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCCceeeeccc-----------cccccccccccceeeeeeccee-ecc-----ceeeeecCCCCcceEEeccCCcEEEEE
Confidence 44577766642 2588899877653222111111 100 222332 467888888889999999
Q ss_pred CCCCceeecccCCCCcccceeEEee-CC-eEEEEEeecCCCCCceeEEEeecCccc
Q 016239 242 LKKHVWSEVQTLRPPGVMFSFLIAS-PN-MLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 242 ~~~~~W~~i~~~~~~~~~~~~~~~~-~g-~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
..+.+- +..+.........+... ++ ++++.|+.+. .+.|| |..+.+
T Consensus 244 ~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~----~i~vw--d~~~~~ 291 (344)
T 4gqb_B 244 TKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSEDC----SLAVL--DSSLSE 291 (344)
T ss_dssp SCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEETTS----CEEEE--CTTCCE
T ss_pred CCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCCC----eEEEE--ECCCCc
Confidence 976642 21111111111222222 44 5666665433 67888 766554
No 90
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.14 E-value=1.2 Score=39.32 Aligned_cols=65 Identities=11% Similarity=0.158 Sum_probs=38.6
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+|++.+.|+..+.|..||+.+.+-...-...... ........++++++.|+.+. .+.+| |..+..
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spd~~~l~s~s~dg----~i~iw--d~~~~~ 239 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP-IRSLTFSPDSQLLVTASDDG----YIKIY--DVQHAN 239 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-CCEEEECTTSCEEEEECTTS----CEEEE--ETTTCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCc-eeEEEEcCCCCEEEEEcCCC----eEEEE--ECCCcc
Confidence 6788888888899999999877533221111111 11222333777777776443 67888 655443
No 91
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.13 E-value=1.3 Score=37.62 Aligned_cols=158 Identities=11% Similarity=-0.044 Sum_probs=79.2
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec----CcceEecCCcCceeecCCCCcCccCceEEEEEcCCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT----PRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDR 152 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g----g~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 152 (392)
..+..||+..+....+.... ......++.. +|.+|+.. .+.++++. +.......... ...-..+++. .
T Consensus 87 ~~i~~~d~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~-~~~p~~i~~~--~-- 159 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLPFDG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAG-SKTQTVLPFTG-LNDPDGVAVD--N-- 159 (270)
T ss_dssp TEEEEECTTCSCCEECCCCS-CSSEEEEEECTTCCEEEEEGGGTEEEEECTT-CCSCEECCCCS-CCSCCCEEEC--T--
T ss_pred CEEEEEeCCCceEeeeecCC-cCCCcceEECCCCCEEEEECCCCEEEEEECC-CceeEeecccc-CCCceeEEEe--C--
Confidence 46788888776544332211 1122344444 77788863 24677765 33332221111 1111122222 1
Q ss_pred CcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEE
Q 016239 153 GHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVF 230 (392)
Q Consensus 153 ~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~ 230 (392)
++++|+.... ...+.+||+.+..-........ .. ...+.+ +|.+|+.
T Consensus 160 ------------~g~l~v~~~~-----------~~~i~~~~~~~~~~~~~~~~~~---~~-----p~~i~~d~~g~l~v~ 208 (270)
T 1rwi_B 160 ------------SGNVYVTDTD-----------NNRVVKLEAESNNQVVLPFTDI---TA-----PWGIAVDEAGTVYVT 208 (270)
T ss_dssp ------------TCCEEEEEGG-----------GTEEEEECTTTCCEEECCCSSC---CS-----EEEEEECTTCCEEEE
T ss_pred ------------CCCEEEEECC-----------CCEEEEEecCCCceEeecccCC---CC-----ceEEEECCCCCEEEE
Confidence 5678887532 1268889887665333221111 11 233333 4689988
Q ss_pred eecccEEEEEECCCCceeecccCCCCcccceeEEe-eCCeEEEEEe
Q 016239 231 GIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA-SPNMLVLAGM 275 (392)
Q Consensus 231 gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~-~~g~l~v~gg 275 (392)
....+.|..||+....-...... .......++. -+|+||+...
T Consensus 209 ~~~~~~v~~~~~~~~~~~~~~~~--~~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 209 EHNTNQVVKLLAGSTTSTVLPFT--GLNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp ETTTSCEEEECTTCSCCEECCCC--SCSCEEEEEECTTCCEEEEEG
T ss_pred ECCCCcEEEEcCCCCcceeeccC--CCCCceeEEECCCCCEEEEEC
Confidence 76677899999976543332111 1111222333 3688888764
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.96 E-value=1.3 Score=40.72 Aligned_cols=102 Identities=12% Similarity=0.132 Sum_probs=56.5
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++++++.|+.+ ..+.+||..+++-... +... .. ...+...++.+.+.|+..+.+..+|...
T Consensus 158 dg~~lasgs~D-----------g~v~iWd~~~~~~~~~--~~~h-~~-----~v~~~s~~~~~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 158 EGNYLAVGTSS-----------AEVQLWDVQQQKRLRN--MTSH-SA-----RVGSLSWNSYILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTTEEEEE--ECCC-SS-----CEEEEEEETTEEEEEETTSEEEEEETTS
T ss_pred CCCEEEEEECC-----------CeEEEEEcCCCcEEEE--EeCC-CC-----ceEEEeeCCCEEEEEeCCCceeEeeecc
Confidence 56777777652 2588899877643221 1111 11 1445566888888899889999999876
Q ss_pred CceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEe
Q 016239 245 HVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 245 ~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
......................+++.++.++.++ .+.+|..
T Consensus 219 ~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~----~v~i~~~ 259 (420)
T 4gga_A 219 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN----LVNVWPS 259 (420)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS----CEEEEES
T ss_pred cceeeEEecccccceeeeeecCCCCeeeeeeccc----cceEEee
Confidence 5433221111111111222333667666665443 5777744
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.93 E-value=1.1 Score=39.54 Aligned_cols=62 Identities=11% Similarity=0.137 Sum_probs=34.4
Q ss_pred CEEEEEeecccEEEEEECCC-CceeecccCCCCcccceeEEe-eC----CeEEEEEeecCCCCCceeEEEee
Q 016239 225 GRFYVFGIYSFSVSSFDLKK-HVWSEVQTLRPPGVMFSFLIA-SP----NMLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~-~~W~~i~~~~~~~~~~~~~~~-~~----g~l~v~gg~~~~~~~~~~v~~~d 290 (392)
+.+++.|+.++.|..+|..+ +.|..+..+.........+.. .+ +.+++.++.+. .+.+|..+
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~----~v~iw~~~ 246 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG----RVFIWTCD 246 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC----EEEEEECS
T ss_pred cceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC----eEEEEEcc
Confidence 35677788888888888864 456655443321111112221 12 25666665443 78888543
No 94
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.81 E-value=2.3 Score=38.79 Aligned_cols=196 Identities=7% Similarity=-0.080 Sum_probs=101.6
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC----cceEecCCcCceeecC--CCCcCccCceEEEEEc
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP----RFGFSRILNTSWHLTS--PLRFSRINPLVGVFYD 149 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg----~~~ynp~~~~~W~~~~--~~~~~r~~~~~~~~~~ 149 (392)
..+..+++.......+.. ......+++.. ++.||+..- ++++++. +...+.+. .+..+ .++++-
T Consensus 96 ~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~-g~~~~~~~~~~~~~p---~glavd-- 167 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLN-GSNVEEVVSTGLESP---GGLAVD-- 167 (386)
T ss_dssp SCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCCEEEEECSSCSCC---CCEEEE--
T ss_pred ccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecC-CCCcEEEEeCCCCCc---cEEEEE--
Confidence 456677776655444322 11222344433 678888732 3677776 44433321 11111 122221
Q ss_pred CCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEE--CC
Q 016239 150 HDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALF--RG 225 (392)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~--~g 225 (392)
..++.||+.-.. ...+++++.....-+.+. .+..+ ...++. ++
T Consensus 168 -------------~~~g~lY~~d~~-----------~~~I~~~~~dg~~~~~l~~~~l~~P---------~giavdp~~g 214 (386)
T 3v65_B 168 -------------WVHDKLYWTDSG-----------TSRIEVANLDGAHRKVLLWQSLEKP---------RAIALHPMEG 214 (386)
T ss_dssp -------------TTTTEEEEEETT-----------TTEEEECBTTSCSCEEEECSSCSCE---------EEEEEETTTT
T ss_pred -------------eCCCeEEEEcCC-----------CCeEEEEeCCCCceEEeecCCCCCC---------cEEEEEcCCC
Confidence 116788887432 226778877654333221 11111 333443 68
Q ss_pred EEEEEeecc-cEEEEEECCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCccceEecccC
Q 016239 226 RFYVFGIYS-FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIM 302 (392)
Q Consensus 226 ~ly~~gg~~-~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~ 302 (392)
.||+..... ..|+++|+....-..+..... .....++. .+++||+.... ...|+++|.+...-+.+...
T Consensus 215 ~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~--~~PnGlavd~~~~~lY~aD~~------~~~I~~~d~dG~~~~~~~~~ 286 (386)
T 3v65_B 215 TIYWTDWGNTPRIEASSMDGSGRRIIADTHL--FWPNGLTIDYAGRRMYWVDAK------HHVIERANLDGSHRKAVISQ 286 (386)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEEEECSSC--SCEEEEEEEGGGTEEEEEETT------TTEEEEECTTSCSCEEEECS
T ss_pred eEEEeccCCCCEEEEEeCCCCCcEEEEECCC--CCeeeEEEeCCCCEEEEEECC------CCEEEEEeCCCCeeEEEEEC
Confidence 999986544 789999986543333322111 11122333 48899998632 34677777665332222211
Q ss_pred CHHHHHhhcCCcccCccceeEEEEeCCEEEEEec
Q 016239 303 PHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 303 p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg 336 (392)
.. ....++++.++.||+...
T Consensus 287 ~~--------------~~P~giav~~~~ly~td~ 306 (386)
T 3v65_B 287 GL--------------PHPFAITVFEDSLYWTDW 306 (386)
T ss_dssp SC--------------SSEEEEEEETTEEEEEET
T ss_pred CC--------------CCceEEEEECCEEEEeeC
Confidence 10 125677778999999874
No 95
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.81 E-value=1.8 Score=37.59 Aligned_cols=106 Identities=13% Similarity=0.130 Sum_probs=55.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
++++++.|+.+ ..+.+||..+++-...-.... ... ...+.+ ++...+.++..+.|..||.
T Consensus 160 ~~~~l~~~~~d-----------~~i~~wd~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 160 DGSLIVSSSYD-----------GLCRIWDTASGQCLKTLIDDD--NPP-----VSFVKFSPNGKYILAATLDNTLKLWDY 221 (312)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTCCEEEEECCSS--CCC-----EEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred CCCEEEEEeCC-----------CcEEEEECCCCceeeEEeccC--CCc-----eEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 55666666541 258889987665322110001 000 222222 5677778888899999999
Q ss_pred CCCceeecccCCCCc-c-cceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 243 KKHVWSEVQTLRPPG-V-MFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 243 ~~~~W~~i~~~~~~~-~-~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
.+.+-...-...... . ........++.+++.|+.++ .+.+| |..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~vw--d~~~~ 269 (312)
T 4ery_A 222 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN----LVYIW--NLQTK 269 (312)
T ss_dssp TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS----CEEEE--ETTTC
T ss_pred CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC----EEEEE--ECCCc
Confidence 877533221111111 1 11112223667777665433 67777 65544
No 96
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.75 E-value=0.83 Score=40.16 Aligned_cols=141 Identities=9% Similarity=-0.069 Sum_probs=70.4
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee-cc-eEEeecC----cceEecCCcCce--eecC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NG-FFFTTTP----RFGFSRILNTSW--HLTS 133 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g-~i~v~gg----~~~ynp~~~~~W--~~~~ 133 (392)
...+|+..... ..+..+|+.+++....-..... ...++.. +| .+|+.+. ++++|+. +++. ..+.
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~ 80 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQITLGYD--FVDTAITSDCSNVVVTSDFCQTLVQIETQ-LEPPKVVAIQ 80 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEEEECCCC--EEEEEECSSSCEEEEEESTTCEEEEEECS-SSSCEEEEEE
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeeeEEccCC--cceEEEcCCCCEEEEEeCCCCeEEEEECC-CCceeEEecc
Confidence 45666665433 4688899988877543222211 1133332 44 5777654 4788987 4543 1221
Q ss_pred CCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCC
Q 016239 134 PLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGY 213 (392)
Q Consensus 134 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~ 213 (392)
....+. ++++.. .++..+| .+... .....+.+||..+++-...-+ .. ..
T Consensus 81 ~~~~~~--~~~~~s---------------~dg~~l~-~~~~~--------~~~~~i~v~d~~~~~~~~~~~--~~-~~-- 129 (331)
T 3u4y_A 81 EGQSSM--ADVDIT---------------PDDQFAV-TVTGL--------NHPFNMQSYSFLKNKFISTIP--IP-YD-- 129 (331)
T ss_dssp ECSSCC--CCEEEC---------------TTSSEEE-ECCCS--------SSSCEEEEEETTTTEEEEEEE--CC-TT--
T ss_pred cCCCCc--cceEEC---------------CCCCEEE-EecCC--------CCcccEEEEECCCCCeEEEEE--CC-CC--
Confidence 111111 112221 1145566 43220 112268899988776433211 11 11
Q ss_pred CccceeeEEE-CC-EEEEEeecccE-EEEEECCC
Q 016239 214 SSQYLSSALF-RG-RFYVFGIYSFS-VSSFDLKK 244 (392)
Q Consensus 214 ~~~~~~~~~~-~g-~ly~~gg~~~~-i~~yd~~~ 244 (392)
....+.. +| .+|+.+...+. +..||...
T Consensus 130 ---~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 130 ---AVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp ---EEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred ---ccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 1223322 45 48887766566 88888754
No 97
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.74 E-value=2.5 Score=38.87 Aligned_cols=180 Identities=9% Similarity=-0.078 Sum_probs=90.9
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee-cce-EEeec---C---cceEecCCcCceeecCCCCcCccCceEEEEEc
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGF-FFTTT---P---RFGFSRILNTSWHLTSPLRFSRINPLVGVFYD 149 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~-i~v~g---g---~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~ 149 (392)
..++.+|..+++...+..... ...+++.. +|. |++.+ | .+++|.. +++...+..... ......+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~~~l~~~~~---~~~~~~~-- 274 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQIRQVTDGRS---NNTEPTW-- 274 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEEECCCCSS---CEEEEEE--
T ss_pred cEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCCCceEEEEECC-CCCEEeCcCCCC---cccceEE--
Confidence 467888988877665543322 11223333 443 44332 1 4778987 565554433221 1111222
Q ss_pred CCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEE
Q 016239 150 HDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRF 227 (392)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~l 227 (392)
.+ +++.+++++.. .....++.+|..++.-+.+..... . ...+.+ +|+.
T Consensus 275 ------------sp-dg~~l~~~s~~--------~g~~~i~~~d~~~~~~~~l~~~~~---~------~~~~~~spdG~~ 324 (415)
T 2hqs_A 275 ------------FP-DSQNLAFTSDQ--------AGRPQVYKVNINGGAPQRITWEGS---Q------NQDADVSSDGKF 324 (415)
T ss_dssp ------------CT-TSSEEEEEECT--------TSSCEEEEEETTSSCCEECCCSSS---E------EEEEEECTTSSE
T ss_pred ------------CC-CCCEEEEEECC--------CCCcEEEEEECCCCCEEEEecCCC---c------ccCeEECCCCCE
Confidence 12 44444443320 112368888988776444432111 0 222222 5654
Q ss_pred EEEeec---ccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 228 YVFGIY---SFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 228 y~~gg~---~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
.++++. ...|..+|+.+.+...+.... ........-+|+.++++..... ...+|.+|..+..-..+..
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~---~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGM---GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETT---EEEEEEEETTSCCEEECCC
T ss_pred EEEEECcCCceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCC---ccEEEEEECCCCcEEEeeC
Confidence 444443 258999999988876553321 1122223347777666654322 4578888887766555544
No 98
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.71 E-value=0.58 Score=41.88 Aligned_cols=114 Identities=12% Similarity=0.191 Sum_probs=61.6
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
+++.++.|+.+ .++.+||..++.++.+..+... ... ...+.+ ++.+++.|+.++.|..+|+
T Consensus 72 ~g~~l~s~s~D-----------~~v~iw~~~~~~~~~~~~~~~h-~~~-----v~~v~~sp~~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 72 CGNYLASASFD-----------ATTCIWKKNQDDFECVTTLEGH-ENE-----VKSVAWAPSGNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp TSSEEEEEETT-----------SCEEEEEECCC-EEEEEEECCC-SSC-----EEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEECC-----------CcEEEEEccCCCeEEEEEccCC-CCC-----ceEEEEeCCCCEEEEEECCCeEEEEEC
Confidence 55666666642 1477777777766544332221 111 223333 5788888888899999998
Q ss_pred CCCc-eeecccCCCCcccceeEE-eeCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 243 KKHV-WSEVQTLRPPGVMFSFLI-ASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 243 ~~~~-W~~i~~~~~~~~~~~~~~-~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
.++. +..+............+. ..++++++.|+.+. .+.+| |..+..|..+..
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~----~i~~w--~~~~~~~~~~~~ 189 (345)
T 3fm0_A 135 DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD----TVKLY--REEEDDWVCCAT 189 (345)
T ss_dssp CTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS----CEEEE--EEETTEEEEEEE
T ss_pred CCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC----cEEEE--EecCCCEEEEEE
Confidence 7653 333322222111112222 23677777776443 67788 655666665443
No 99
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.68 E-value=1.4 Score=40.26 Aligned_cols=103 Identities=18% Similarity=0.155 Sum_probs=55.9
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++++++.|+.+ ..+.+||..+++-...-. .. ... ...+..++.+++.|+..+.|..||+..
T Consensus 145 ~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~--~~-~~~-----v~~~~~~~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 145 DGSFLSVGLGN-----------GLVDIYDVESQTKLRTMA--GH-QAR-----VGCLSWNRHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTCCEEEEEC--CC-SSC-----EEEEEEETTEEEEEETTSEEEEEETTS
T ss_pred CCCEEEEECCC-----------CeEEEEECcCCeEEEEec--CC-CCc-----eEEEEECCCEEEEEcCCCCEEEEeccc
Confidence 55666666541 158888887765322211 11 111 344555788888899899999999974
Q ss_pred CceeecccCCCCcccceeEE-eeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 245 HVWSEVQTLRPPGVMFSFLI-ASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 245 ~~W~~i~~~~~~~~~~~~~~-~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
..-... ...........+. ..++.+++.|+.++ .+.+| |..+
T Consensus 206 ~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d~----~v~iw--d~~~ 248 (401)
T 4aez_A 206 ANHQIG-TLQGHSSEVCGLAWRSDGLQLASGGNDN----VVQIW--DARS 248 (401)
T ss_dssp SSCEEE-EEECCSSCEEEEEECTTSSEEEEEETTS----CEEEE--ETTC
T ss_pred Ccceee-EEcCCCCCeeEEEEcCCCCEEEEEeCCC----eEEEc--cCCC
Confidence 331111 1111111112222 22677777776543 57777 6554
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.63 E-value=0.94 Score=45.60 Aligned_cols=65 Identities=9% Similarity=0.051 Sum_probs=35.7
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
++.+++.++..+.|..||..+.+-................... ++.++++|+.++ .+.+| |..+.
T Consensus 152 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg----~i~~~--d~~~~ 218 (814)
T 3mkq_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL----TIKIW--DYQTK 218 (814)
T ss_dssp EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTS----EEEEE--ETTTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC----EEEEE--ECCCC
Confidence 4678888888899999998765432221111101111111222 677777775432 56777 55443
No 101
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.62 E-value=0.84 Score=39.85 Aligned_cols=107 Identities=11% Similarity=0.021 Sum_probs=61.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECCEEEEEeecccEEEEEECC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIYSFSVSSFDLK 243 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~i~~yd~~ 243 (392)
++.+|++... ...+.+||+.++.-+... .+.. . .+.+. -+|.+|+.. ...|..||+.
T Consensus 24 ~~~l~~~d~~-----------~~~i~~~d~~~~~~~~~~-~~~~--~------~~i~~~~dG~l~v~~--~~~l~~~d~~ 81 (297)
T 3g4e_A 24 SNSLLFVDIP-----------AKKVCRWDSFTKQVQRVT-MDAP--V------SSVALRQSGGYVATI--GTKFCALNWK 81 (297)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTTCCEEEEE-CSSC--E------EEEEEBTTSSEEEEE--TTEEEEEETT
T ss_pred CCEEEEEECC-----------CCEEEEEECCCCcEEEEe-CCCc--e------EEEEECCCCCEEEEE--CCeEEEEECC
Confidence 5788887542 226889999887654332 1111 1 22222 267766654 4689999999
Q ss_pred CCceeecccCCC---CcccceeEEeeCCeEEEEEeecCC-----CCCceeEEEeecCc
Q 016239 244 KHVWSEVQTLRP---PGVMFSFLIASPNMLVLAGMCNAP-----RGPSFNLWKVDELS 293 (392)
Q Consensus 244 ~~~W~~i~~~~~---~~~~~~~~~~~~g~l~v~gg~~~~-----~~~~~~v~~~d~~~ 293 (392)
+++++.+..... ........+.-+|+||+....... ......+|++|+..
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 998887654332 111222334447898875432211 12356899998764
No 102
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=94.58 E-value=0.013 Score=57.25 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=31.7
Q ss_pred cCCcHHHHHHHHhhC-ChhhHHHhhccchhhhhhh
Q 016239 11 TTLSTDITERILSLL-PIPTLIRASSVCKSWRSII 44 (392)
Q Consensus 11 ~~Lp~dl~~~iL~rL-P~~~l~~~~~v~k~W~~l~ 44 (392)
..||+|++.+||++| |.+++.++..|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 479999999999999 8999999999999998873
No 103
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.52 E-value=1.3 Score=37.63 Aligned_cols=102 Identities=10% Similarity=-0.037 Sum_probs=54.4
Q ss_pred EEEEEeCCC-CCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeec----ccEEEEEECCCCceeecccCCCCccccee
Q 016239 188 AVEIYDPHS-DSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIY----SFSVSSFDLKKHVWSEVQTLRPPGVMFSF 262 (392)
Q Consensus 188 ~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~----~~~i~~yd~~~~~W~~i~~~~~~~~~~~~ 262 (392)
.+.++|..+ +....+...+...... .....-+|+.+++++. ...|+.+|..+.+-..+..... ....
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~ 134 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNN-----DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP---SYWH 134 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCS-----CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS---EEEE
T ss_pred eEEEEeCCCCCCceEecccccccccc-----ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC---ccce
Confidence 688999988 7666554322110111 1111225655555542 3588999987776554433221 1111
Q ss_pred EEeeCCeE-EEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 263 LIASPNML-VLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 263 ~~~~~g~l-~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
....+++. ++.+.... ...+|.+|..+.....+..
T Consensus 135 ~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp EECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCC
T ss_pred EECCCCCEEEEEECCCC----ceEEEEEECCCCcceEccc
Confidence 22235654 43444332 5789998887766655544
No 104
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.51 E-value=1.2 Score=39.71 Aligned_cols=62 Identities=11% Similarity=0.169 Sum_probs=40.1
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeE-EeeCCeEEEEEeecCCCCCceeEEEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
++.+++.|+.++.|..||..++.|..+............+ ...+|++++.|+.++ .+.+|..
T Consensus 161 ~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~----~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR----TVRIWRQ 223 (345)
T ss_dssp SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS----CEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC----eEEEecc
Confidence 5778888888889999999888886554433311111222 233677777776543 6888854
No 105
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.42 E-value=2.5 Score=37.35 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=43.8
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe-eC--CeEEEEEeecCCCCCceeEEEeecC----ccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA-SP--NMLVLAGMCNAPRGPSFNLWKVDEL----SMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~-~~--g~l~v~gg~~~~~~~~~~v~~~d~~----~~~W 296 (392)
++.+++.|+.++.|..+|..++.|..+..+.........+.. .+ +.+++.|+.+. .+.+|.+... ...|
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~----~v~iw~~~~~~~~~~~~~ 239 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS----TVRVWKYMGDDEDDQQEW 239 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS----CEEEEEEEEECTTSCEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC----eEEEEEecCCCcccccee
Confidence 577888888889999999888777665444331111111222 22 44555555433 6889966432 2346
Q ss_pred EecccCC
Q 016239 297 SEIAIMP 303 (392)
Q Consensus 297 ~~~~~~p 303 (392)
..+..++
T Consensus 240 ~~~~~~~ 246 (330)
T 2hes_X 240 VCEAILP 246 (330)
T ss_dssp EEEEECC
T ss_pred EEeeecc
Confidence 6555443
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.40 E-value=2.3 Score=39.04 Aligned_cols=131 Identities=9% Similarity=0.025 Sum_probs=65.7
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcc-eEEee-cceEEeecC----cceEecCCcCceeecCCCCcCccCceEEEEEcCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGS-CFIGA-NGFFFTTTP----RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHD 151 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~g~i~v~gg----~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 151 (392)
..+.++|..+++...+-.+..+.... +++.. +|..+++|+ +.+||.. +++-. ..+............
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~-~~~~~--~~~~~h~~~v~~~s~---- 197 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-QQKRL--RNMTSHSARVGSLSW---- 197 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEE--EEECCCSSCEEEEEE----
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC-CCcEE--EEEeCCCCceEEEee----
Confidence 45788898887765543333332222 23322 566666654 3678877 44322 112111112222233
Q ss_pred CCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE--ECCEEEE
Q 016239 152 RGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL--FRGRFYV 229 (392)
Q Consensus 152 ~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~--~~g~ly~ 229 (392)
++.+++.|+.+ ..+..+|......... .+... ... ..... -++...+
T Consensus 198 -------------~~~~l~sgs~d-----------~~i~~~d~~~~~~~~~-~~~~h-~~~-----~~~~~~~~~g~~l~ 246 (420)
T 4gga_A 198 -------------NSYILSSGSRS-----------GHIHHHDVRVAEHHVA-TLSGH-SQE-----VCGLRWAPDGRHLA 246 (420)
T ss_dssp -------------ETTEEEEEETT-----------SEEEEEETTSSSCEEE-EEECC-SSC-----EEEEEECTTSSEEE
T ss_pred -------------CCCEEEEEeCC-----------CceeEeeecccceeeE-Eeccc-ccc-----eeeeeecCCCCeee
Confidence 55666666541 2566777654432211 11110 100 12222 2567778
Q ss_pred EeecccEEEEEECCCCc
Q 016239 230 FGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 230 ~gg~~~~i~~yd~~~~~ 246 (392)
.++.++.+..+|..+.+
T Consensus 247 s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 247 SGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp EEETTSCEEEEESSCCS
T ss_pred eeeccccceEEeecccc
Confidence 88888889999887653
No 107
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=94.26 E-value=2.7 Score=37.97 Aligned_cols=60 Identities=12% Similarity=0.105 Sum_probs=34.4
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
++ +++.++..+.|..||+.+.+-.......... ........+++++++++.++ .+.+|.+
T Consensus 300 ~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~~dg----~i~i~~~ 359 (425)
T 1r5m_A 300 DD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-IFAGRISQDGQKYAVAFMDG----QVNVYDL 359 (425)
T ss_dssp TT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-EEEEEECTTSSEEEEEETTS----CEEEEEC
T ss_pred CC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-EEEEEEcCCCCEEEEEECCC----eEEEEEC
Confidence 45 7777888889999999876533322211111 11112233677777776433 6777744
No 108
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.20 E-value=1.1 Score=39.42 Aligned_cols=75 Identities=11% Similarity=0.054 Sum_probs=43.2
Q ss_pred EEEEEeecccEEEEEECCC---CceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccC
Q 016239 226 RFYVFGIYSFSVSSFDLKK---HVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIM 302 (392)
Q Consensus 226 ~ly~~gg~~~~i~~yd~~~---~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~ 302 (392)
.+.+.|+.++.|..+|..+ +.|...................++++++.++.++ .+.+|..+.. ..|..+..+
T Consensus 229 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~----~v~lw~~~~~-g~~~~~~~~ 303 (316)
T 3bg1_A 229 STIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN----KVTLWKESVD-GQWVCISDV 303 (316)
T ss_dssp CEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS----CEEEEEECTT-SCEEEEEEC
T ss_pred ceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC----eEEEEEECCC-CcEEEeeec
Confidence 6777888889999999876 3333210000011111212233677777776544 6899966543 579988887
Q ss_pred CHH
Q 016239 303 PHD 305 (392)
Q Consensus 303 p~~ 305 (392)
...
T Consensus 304 ~~~ 306 (316)
T 3bg1_A 304 NKG 306 (316)
T ss_dssp C--
T ss_pred cCC
Confidence 754
No 109
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.13 E-value=3.3 Score=37.60 Aligned_cols=97 Identities=11% Similarity=0.106 Sum_probs=50.8
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecc-cCCCCcccceeEE
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQ-TLRPPGVMFSFLI 264 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~-~~~~~~~~~~~~~ 264 (392)
.+.+||..+++....-..... ... ...+.+ ++.+++.|+.++.|..||+.+.+-...- .............
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~-~~~-----v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVH-PDT-----IYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTC-CSC-----EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred EEEEEECCCCCccEEEecCCC-CCc-----eEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 588899887654322100110 111 233333 6778888888899999999887543321 1111111222233
Q ss_pred eeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 265 ASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 265 ~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
..++++++.|.... ....+.+| |..+
T Consensus 229 ~~~~~~l~~g~~~~-~d~~i~iw--d~~~ 254 (402)
T 2aq5_A 229 VSEGKILTTGFSRM-SERQVALW--DTKH 254 (402)
T ss_dssp CSTTEEEEEEECTT-CCEEEEEE--ETTB
T ss_pred cCCCcEEEEeccCC-CCceEEEE--cCcc
Confidence 44788777773211 11156666 6554
No 110
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.12 E-value=4.7 Score=39.41 Aligned_cols=140 Identities=9% Similarity=-0.068 Sum_probs=75.6
Q ss_pred eEEEEEeCC-CC---CeecCCCCCCCCCCCCCccceeeEEE-CCEEEEEeeccc--EEEEEECCCCceeecccCCCCc--
Q 016239 187 LAVEIYDPH-SD---SWELCPPLPADFRSGYSSQYLSSALF-RGRFYVFGIYSF--SVSSFDLKKHVWSEVQTLRPPG-- 257 (392)
Q Consensus 187 ~~~~~yd~~-~~---~W~~~~~~~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~--~i~~yd~~~~~W~~i~~~~~~~-- 257 (392)
.+++++|.. ++ ..+.+..-.. .. ....+.. +|++|+.+...+ .|+.+|+.+.++..+.......
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~--~~-----~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 289 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPE--EA-----IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAG 289 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETT--BC-----EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSC
T ss_pred cEEEEEEECCCCcccccEEeCCCCC--ce-----EcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccC
Confidence 478999988 56 3333321101 11 1222222 678887766554 8999999888887764422110
Q ss_pred --c--cceeEEe-eCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEE-EEeCCEE
Q 016239 258 --V--MFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKC-VGLGNLI 331 (392)
Q Consensus 258 --~--~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~i 331 (392)
. ....+.. -++++++.+.. ....+|.+|..+...+.+..-... ...+ ...++.+
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~d~~~~~~~~l~~~~~~---------------~~~~~s~~~~~~ 349 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGK-----GAAVLGILDPESGELVDAAGPWTE---------------WAATLTVSGTRA 349 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBS-----SSCEEEEEETTTTEEEECCSSCCE---------------EEEEEEEETTEE
T ss_pred ccccccCceEeEeCCCEEEEEEEc-----CccEEEEEECCCCcEEEecCCCCe---------------EEEEEecCCCEE
Confidence 0 0112233 37888776643 267899999877766555331111 1233 4567777
Q ss_pred EEEeccccCCCCeEEEEeecCCCc
Q 016239 332 YVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 332 ~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
++..+... ....++.+|..+++
T Consensus 350 ~~~~~~~~--~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 350 VGVAASPR--TAYEVVELDTVTGR 371 (662)
T ss_dssp EEEEEETT--EEEEEEEEETTTCC
T ss_pred EEEEcCCC--CCCEEEEEECCCCc
Confidence 76654322 22334445666555
No 111
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.11 E-value=0.54 Score=41.60 Aligned_cols=117 Identities=8% Similarity=0.017 Sum_probs=66.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECCEEEEEeecc----cEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIYS----FSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~----~~i~~ 239 (392)
++++|+.+.. ...+.+||+.+++.+.+...+.. . ..+.+. -+|.+|+.+... +.|..
T Consensus 55 ~g~l~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~~-~------~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 55 QGQLFLLDVF-----------EGNIFKINPETKEIKRPFVSHKA-N------PAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp TSCEEEEETT-----------TCEEEEECTTTCCEEEEEECSSS-S------EEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred CCCEEEEECC-----------CCEEEEEeCCCCcEEEEeeCCCC-C------cceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 6678887643 12688999988877654311111 1 122332 267888876544 58999
Q ss_pred EECCCCceeec-ccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 240 FDLKKHVWSEV-QTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 240 yd~~~~~W~~i-~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
||+.+++...+ ........-....+.-+|+||+.............||++|+.+.+...+
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 99988876533 2111111112222334788888653211111246899999877665543
No 112
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.10 E-value=2.6 Score=36.46 Aligned_cols=63 Identities=13% Similarity=0.200 Sum_probs=39.9
Q ss_pred CeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEEC----CEEEEEeecccEEEEEE
Q 016239 166 PKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFR----GRFYVFGIYSFSVSSFD 241 (392)
Q Consensus 166 ~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----g~ly~~gg~~~~i~~yd 241 (392)
+.+++.|+.+ .++.++|..++.|..+..+... ... ...+.+. +.+++.|+.++.|..||
T Consensus 67 g~~l~s~s~D-----------~~v~iWd~~~~~~~~~~~~~~h-~~~-----v~~v~~~p~~~g~~l~s~s~d~~v~~wd 129 (297)
T 2pm7_B 67 GTILASCSYD-----------GKVMIWKEENGRWSQIAVHAVH-SAS-----VNSVQWAPHEYGPMLLVASSDGKVSVVE 129 (297)
T ss_dssp CSEEEEEETT-----------TEEEEEEBSSSCBCCCEEECCC-SSC-----EEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCEEEEEcCC-----------CEEEEEEcCCCceEEEEEeecC-CCc-----eeEEEeCcCCCCcEEEEEECCCcEEEEE
Confidence 5677776652 2688999988877655432211 111 2333332 56778888889999999
Q ss_pred CCCC
Q 016239 242 LKKH 245 (392)
Q Consensus 242 ~~~~ 245 (392)
+.+.
T Consensus 130 ~~~~ 133 (297)
T 2pm7_B 130 FKEN 133 (297)
T ss_dssp BCSS
T ss_pred ecCC
Confidence 8765
No 113
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.88 E-value=3.5 Score=37.03 Aligned_cols=196 Identities=7% Similarity=-0.080 Sum_probs=102.2
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEe--ecceEEeecC----cceEecCCcCceeecC--CCCcCccCceEEEEEc
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIG--ANGFFFTTTP----RFGFSRILNTSWHLTS--PLRFSRINPLVGVFYD 149 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~g~i~v~gg----~~~ynp~~~~~W~~~~--~~~~~r~~~~~~~~~~ 149 (392)
..+..+++.......+.. ......+++. .++.||+..- .+++++. +...+.+. .+..+ .++++-
T Consensus 53 ~~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~-g~~~~~~~~~~~~~p---~glavd-- 124 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLN-GSNVEEVVSTGLESP---GGLAVD-- 124 (349)
T ss_dssp SCEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSCC---CEEEEE--
T ss_pred cceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEeccCCceEEEecC-CCCceEEEeCCCCCc---cEEEEe--
Confidence 446777877666544322 1112234443 3688988742 3677776 44333321 11111 222221
Q ss_pred CCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEE--CC
Q 016239 150 HDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALF--RG 225 (392)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~--~g 225 (392)
. .++.||+.-.. ...+++++.....-+.+. .+..+ ...++. +|
T Consensus 125 ~-------------~~g~ly~~d~~-----------~~~I~~~~~dG~~~~~l~~~~l~~P---------~~iavdp~~g 171 (349)
T 3v64_C 125 W-------------VHDKLYWTDSG-----------TSRIEVANLDGAHRKVLLWQSLEKP---------RAIALHPMEG 171 (349)
T ss_dssp T-------------TTTEEEEEETT-----------TTEEEEEETTSCSCEEEECTTCSCE---------EEEEEETTTT
T ss_pred c-------------CCCeEEEEcCC-----------CCeEEEEcCCCCceEEEEeCCCCCc---------ceEEEecCcC
Confidence 1 16788887432 226888887654433321 11111 334443 68
Q ss_pred EEEEEeecc-cEEEEEECCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCccceEecccC
Q 016239 226 RFYVFGIYS-FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIM 302 (392)
Q Consensus 226 ~ly~~gg~~-~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~ 302 (392)
.||+..... ..|+++|+....-+.+..... .....++. .+++||+.... ...|+++|.+...=+.+...
T Consensus 172 ~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~--~~PnGla~d~~~~~lY~aD~~------~~~I~~~~~dG~~~~~~~~~ 243 (349)
T 3v64_C 172 TIYWTDWGNTPRIEASSMDGSGRRIIADTHL--FWPNGLTIDYAGRRMYWVDAK------HHVIERANLDGSHRKAVISQ 243 (349)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEESCCSSC--SCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECS
T ss_pred eEEEeccCCCCEEEEEeCCCCCcEEEEECCC--CCcceEEEeCCCCEEEEEECC------CCEEEEEeCCCCceEEEEeC
Confidence 999997555 789999987543333322111 11122333 47899998632 34566777665332222221
Q ss_pred CHHHHHhhcCCcccCccceeEEEEeCCEEEEEec
Q 016239 303 PHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 303 p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg 336 (392)
.. ....++++.++.||+...
T Consensus 244 ~~--------------~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 244 GL--------------PHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp SC--------------SSEEEEEEETTEEEEEET
T ss_pred CC--------------CCceEEEEECCEEEEecC
Confidence 10 125677778999999874
No 114
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.81 E-value=3 Score=36.54 Aligned_cols=64 Identities=9% Similarity=0.028 Sum_probs=35.1
Q ss_pred CCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee-cc-eEEeecC----cceEecCCcCce
Q 016239 60 SPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NG-FFFTTTP----RFGFSRILNTSW 129 (392)
Q Consensus 60 ~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g-~i~v~gg----~~~ynp~~~~~W 129 (392)
..++.+|+.++.+ ..+..+|+.+++....-..+.......++.. +| .+|+.+. ++++|+. +++.
T Consensus 8 ~~~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~-t~~~ 77 (349)
T 1jmx_B 8 KAGHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD-TCKN 77 (349)
T ss_dssp CTTCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT-TTEE
T ss_pred cCCCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC-CCcE
Confidence 4456677765533 5688999988765432222210012233333 44 5777643 4788987 5543
No 115
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.78 E-value=2.8 Score=36.15 Aligned_cols=139 Identities=9% Similarity=0.007 Sum_probs=70.3
Q ss_pred EEEEEeCCCC--CeecCCCCCCCCCCCCCccceeeEEECCEEEEEeec-ccEEEEEECCCC-ceeecccCC-CC--cccc
Q 016239 188 AVEIYDPHSD--SWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIY-SFSVSSFDLKKH-VWSEVQTLR-PP--GVMF 260 (392)
Q Consensus 188 ~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~-~~~i~~yd~~~~-~W~~i~~~~-~~--~~~~ 260 (392)
.+..||+ ++ .|+.-.+.... . ......-+|.+++.... .+.++.+|+.-+ .|+.-.... .. ....
T Consensus 57 ~V~~~d~-~G~~~W~~~~~~~~~--~-----~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 57 GAKMITR-DGRELWNIAAPAGCE--M-----QTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp EEEEECT-TSCEEEEEECCTTCE--E-----EEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCS
T ss_pred CEEEECC-CCCEEEEEcCCCCcc--c-----cccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCccccccc
Confidence 5888888 44 37654321111 0 11223347777777654 678999998544 343321100 00 0111
Q ss_pred eeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc-ceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEecccc
Q 016239 261 SFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM-EFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYH 339 (392)
Q Consensus 261 ~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~-~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~ 339 (392)
......+|.+++.... ...|..||++.+ .|+.-.. .. ........++.+++.+...
T Consensus 129 ~v~~~~~G~~lv~~~~------~~~v~~~d~~G~~~w~~~~~--~~--------------~~~~~~~~~g~~~v~~~~~- 185 (276)
T 3no2_A 129 QINKNKKGNYLVPLFA------TSEVREIAPNGQLLNSVKLS--GT--------------PFSSAFLDNGDCLVACGDA- 185 (276)
T ss_dssp CCEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECS--SC--------------CCEEEECTTSCEEEECBTT-
T ss_pred CceECCCCCEEEEecC------CCEEEEECCCCCEEEEEECC--CC--------------ccceeEcCCCCEEEEeCCC-
Confidence 1223457777766532 234566677643 3664322 11 1223445567788876521
Q ss_pred CCCCeEEEEeecCCCccceeeeec
Q 016239 340 KKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 340 ~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
-.++.+|+++++ ..|+.-
T Consensus 186 ----~~v~~~d~~tG~--~~w~~~ 203 (276)
T 3no2_A 186 ----HCFVQLNLESNR--IVRRVN 203 (276)
T ss_dssp ----SEEEEECTTTCC--EEEEEE
T ss_pred ----CeEEEEeCcCCc--EEEEec
Confidence 135667888766 457763
No 116
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.74 E-value=3.4 Score=36.54 Aligned_cols=91 Identities=12% Similarity=0.169 Sum_probs=49.8
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeE-E
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFL-I 264 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~-~ 264 (392)
.+.+||..++.-... +... ... ...+.+ ++.+++.|+.++.|..||+.+.+-... ..........+ .
T Consensus 165 ~i~~wd~~~~~~~~~--~~~h-~~~-----v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~--~~~h~~~v~~v~~ 234 (340)
T 1got_B 165 TCALWDIETGQQTTT--FTGH-TGD-----VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT--FTGHESDINAICF 234 (340)
T ss_dssp CEEEEETTTTEEEEE--ECCC-SSC-----EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE--ECCCSSCEEEEEE
T ss_pred cEEEEECCCCcEEEE--EcCC-CCc-----eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE--EcCCcCCEEEEEE
Confidence 588888877653221 1111 110 222222 577888899889999999987643221 11111111122 2
Q ss_pred eeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 265 ASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 265 ~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
..++++++.|+.++ .+.+| |..+.
T Consensus 235 ~p~~~~l~s~s~d~----~v~iw--d~~~~ 258 (340)
T 1got_B 235 FPNGNAFATGSDDA----TCRLF--DLRAD 258 (340)
T ss_dssp CTTSSEEEEEETTS----CEEEE--ETTTT
T ss_pred cCCCCEEEEEcCCC----cEEEE--ECCCC
Confidence 33777777776543 68888 65443
No 117
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.65 E-value=3.2 Score=35.90 Aligned_cols=185 Identities=8% Similarity=-0.083 Sum_probs=88.0
Q ss_pred CceeeeeCCCCceeeCCCCC---CCCCcceEEee-c-ceEEeec---CcceEecCCcCceeec-CCCCc--CccCceEEE
Q 016239 78 NQSFAFDPASNSWFHLPPAQ---EPRAGSCFIGA-N-GFFFTTT---PRFGFSRILNTSWHLT-SPLRF--SRINPLVGV 146 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~~-~-g~i~v~g---g~~~ynp~~~~~W~~~-~~~~~--~r~~~~~~~ 146 (392)
..+..||+.++++..+.... ......+++.. + |.+|+.+ ++++||+. ++...+ ..... +........
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~i~ 123 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD--GTFEEIAKKDSEGRRMQGCNDCA 123 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT--SCEEECCSBCTTSCBCBCCCEEE
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC--CCEEEEEeccCCCccccCCcCEE
Confidence 46888998888876543210 00112234433 5 7888874 46888886 444433 22111 111111222
Q ss_pred EEcCCCCcccccCCcccCCCeEEEEeceeecC--cc--cccccceEEEEEeCCCCCeecCCC-CCCCCCCCCCccceeeE
Q 016239 147 FYDHDRGHCDLASGFACNLPKFIVVGGVRFIG--GL--VDIEDRLAVEIYDPHSDSWELCPP-LPADFRSGYSSQYLSSA 221 (392)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~--~~--~~~~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~~ 221 (392)
+ +. ++++|+........ .. ........+..||+. ++.+.+.. ...+ ...+
T Consensus 124 ~-d~--------------~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---------~~i~ 178 (314)
T 1pjx_A 124 F-DY--------------EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---------NGIA 178 (314)
T ss_dssp E-CT--------------TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---------EEEE
T ss_pred E-CC--------------CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---------ceEE
Confidence 2 22 66788765321000 00 000112468888876 55443321 1111 2333
Q ss_pred EE-----CC-EEEEEeecccEEEEEECC-CCceee---cccCCCCc-ccceeEE-eeCCeEEEEEeecCCCCCceeEEEe
Q 016239 222 LF-----RG-RFYVFGIYSFSVSSFDLK-KHVWSE---VQTLRPPG-VMFSFLI-ASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 222 ~~-----~g-~ly~~gg~~~~i~~yd~~-~~~W~~---i~~~~~~~-~~~~~~~-~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
.. ++ .+|+.....+.|.+||+. +++... +...+... .....++ ..+|+||+.... ...|.++
T Consensus 179 ~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~------~~~i~~~ 252 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG------SSHIEVF 252 (314)
T ss_dssp EEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET------TTEEEEE
T ss_pred EecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC------CCEEEEE
Confidence 33 34 577776666789999976 444322 11111111 1112233 347888887532 2356667
Q ss_pred ecCccc
Q 016239 290 DELSME 295 (392)
Q Consensus 290 d~~~~~ 295 (392)
|+.+.+
T Consensus 253 d~~~g~ 258 (314)
T 1pjx_A 253 GPDGGQ 258 (314)
T ss_dssp CTTCBS
T ss_pred cCCCCc
Confidence 887443
No 118
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.64 E-value=4.3 Score=37.35 Aligned_cols=100 Identities=10% Similarity=0.065 Sum_probs=50.6
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--C-CEEEEEeecccEEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--R-GRFYVFGIYSFSVSSFD 241 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~-g~ly~~gg~~~~i~~yd 241 (392)
++++++.|+.+ ..+.+||..... +..+... ... ...+.+ + ..+++.|+.++.|..||
T Consensus 220 ~~~~l~~g~~d-----------g~i~~wd~~~~~---~~~~~~h-~~~-----v~~v~~~p~~~~~~~s~s~d~~v~iwd 279 (435)
T 4e54_B 220 SSRMVVTGDNV-----------GNVILLNMDGKE---LWNLRMH-KKK-----VTHVALNPCCDWFLATASVDQTVKIWD 279 (435)
T ss_dssp TTTEEEEECSS-----------SBEEEEESSSCB---CCCSBCC-SSC-----EEEEEECTTCSSEEEEEETTSBCCEEE
T ss_pred CCCEEEEEeCC-----------CcEeeeccCcce---eEEEecc-cce-----EEeeeecCCCceEEEEecCcceeeEEe
Confidence 56777777652 257888875532 2221111 111 233333 2 34777788888899999
Q ss_pred CCCCceeecc-cCCCCcccceeE-EeeCCeEEEEEeecCCCCCceeEEE
Q 016239 242 LKKHVWSEVQ-TLRPPGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLWK 288 (392)
Q Consensus 242 ~~~~~W~~i~-~~~~~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~ 288 (392)
+.+.+-.... ...........+ ...+|..++.|+.++ .+.+|.
T Consensus 280 ~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~----~i~iwd 324 (435)
T 4e54_B 280 LRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS----EIRVYS 324 (435)
T ss_dssp TTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS----CEEEEE
T ss_pred cccccccceEEEeeeccccccceeECCCCCeeEEEcCCC----EEEEEE
Confidence 8765432211 111111111111 123677777776543 678883
No 119
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.63 E-value=6 Score=38.98 Aligned_cols=105 Identities=9% Similarity=0.096 Sum_probs=55.3
Q ss_pred ceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecc-----cEEEEEECCCC-ceeecccCCCCc
Q 016239 186 RLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYS-----FSVSSFDLKKH-VWSEVQTLRPPG 257 (392)
Q Consensus 186 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~-----~~i~~yd~~~~-~W~~i~~~~~~~ 257 (392)
...+.++|..+++-..+...... .. ....+.+ +|+..+++... ..|..+|+.+. ....+.......
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~-~~-----~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPK-EK-----FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKH 307 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCT-TC-----EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSS
T ss_pred eeEEEEEECCCCceEeeccCCCC-ce-----eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCC
Confidence 35788999988775544321111 11 1222333 56533333322 38999999887 666553221111
Q ss_pred c---cceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccceEecc
Q 016239 258 V---MFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 258 ~---~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~ 300 (392)
. .......- +|++++.+..+ ....+|.+|..+...+.+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~----g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRD----GWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTT----SSCEEEEEETTSCEEEECC
T ss_pred eECccCCceeecCCCCEEEEEEccC----CccEEEEEECCCCEEEecC
Confidence 0 11222344 78866555322 1578999987666666553
No 120
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.54 E-value=0.86 Score=45.46 Aligned_cols=132 Identities=8% Similarity=-0.098 Sum_probs=69.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCC--CCCCCCCCCCccceeeEE--ECCEEEEEeec-ccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPP--LPADFRSGYSSQYLSSAL--FRGRFYVFGIY-SFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~~~~~~~~~~~~~--~~g~ly~~gg~-~~~i~~ 239 (392)
++.||+.-.. ...+.++++....-+.+.. +..+ ...++ .+|.||+.... .+.|++
T Consensus 464 ~g~LY~tD~~-----------~~~I~v~d~dg~~~~~l~~~~~~~P---------~giavDp~~g~ly~td~~~~~~I~~ 523 (699)
T 1n7d_A 464 HSNIYWTDSV-----------LGTVSVADTKGVKRKTLFREQGSKP---------RAIVVDPVHGFMYWTDWGTPAKIKK 523 (699)
T ss_dssp SSBCEECCTT-----------TSCEEEEBSSSCCEEEECCCSSCCC---------CCEECCSSSSCCEECCCSSSCCEEB
T ss_pred CCcEEEEecc-----------CCeEEEEecCCCceEEEEeCCCCCc---------ceEEEccCCCcEEEcccCCCCeEEE
Confidence 6788886321 2257888876554333322 1121 22222 26889988633 368999
Q ss_pred EECCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccC
Q 016239 240 FDLKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDD 317 (392)
Q Consensus 240 yd~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~ 317 (392)
+++....-+.+..... .....+++ .+++||+.-.. ...|+++|.....-+.+...+..+
T Consensus 524 ~~~dG~~~~~l~~~~l--~~PnGlavd~~~~~LY~aD~~------~~~I~~~d~dG~~~~~~~~~~~~~----------- 584 (699)
T 1n7d_A 524 GGLNGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRL----------- 584 (699)
T ss_dssp CCSSSCCCCEESCSSC--SSCCCEEECTTTCCEEEEETT------TTEEEEECSSSSCCEEECCCSSSC-----------
T ss_pred EeCCCCCeeEEEeCCC--CCccEEEEeccCCEEEEEecC------CCeEEEEccCCCceEEEEecCCcC-----------
Confidence 8886543333321111 11112333 36889987632 345667777654333333221110
Q ss_pred ccceeEEEEeCCEEEEEec
Q 016239 318 KFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 318 ~~~~~~~~~~~~~i~v~gg 336 (392)
....++++.++.||+...
T Consensus 585 -~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 585 -AHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp -SSCCCCEEETTEEEEECS
T ss_pred -CCceEeEEECCEEEEEeC
Confidence 124566778889999874
No 121
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.51 E-value=4.5 Score=37.11 Aligned_cols=132 Identities=8% Similarity=-0.111 Sum_probs=73.5
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEE--CCEEEEEe-ecccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALF--RGRFYVFG-IYSFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~--~g~ly~~g-g~~~~i~~ 239 (392)
++.||+.-.. ...++++++....-+.+. .+..+ .+.++. +|.||+.. |....|++
T Consensus 170 ~~~lY~~d~~-----------~~~I~~~~~~g~~~~~l~~~~~~~P---------~~iavdp~~g~ly~td~~~~~~I~~ 229 (400)
T 3p5b_L 170 HSNIYWTDSV-----------LGTVSVADTKGVKRKTLFRENGSKP---------RAIVVDPVHGFMYWTDWGTPAKIKK 229 (400)
T ss_dssp TTEEEEEETT-----------TTEEEEECTTTCSEEEEEECSSCCE---------EEEEEETTTTEEEEEECSSSCCEEE
T ss_pred CCceEEEECC-----------CCeEEEEeCCCCceEEEEeCCCCCc---------ceEEEecccCeEEEEeCCCCCEEEE
Confidence 6789988432 226888888765544332 12111 333332 68999986 43468999
Q ss_pred EECCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccC
Q 016239 240 FDLKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDD 317 (392)
Q Consensus 240 yd~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~ 317 (392)
+++....=..+..... ..-..++. .+++||+.... ...|+++|.+...-+.+...+..+
T Consensus 230 ~~~dG~~~~~~~~~~l--~~P~glavd~~~~~lY~aD~~------~~~I~~~d~dG~~~~~~~~~~~~l----------- 290 (400)
T 3p5b_L 230 GGLNGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRL----------- 290 (400)
T ss_dssp EETTSCSCEEEECSSC--SCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCCCEEEEECSSTT-----------
T ss_pred EeCCCCccEEEEECCC--CceEEEEEEeCCCEEEEEECC------CCEEEEEeCCCCccEEEEeCCCCC-----------
Confidence 9986543222211111 11122333 37899998532 346777777654433333221111
Q ss_pred ccceeEEEEeCCEEEEEec
Q 016239 318 KFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 318 ~~~~~~~~~~~~~i~v~gg 336 (392)
...+++++.++.||+...
T Consensus 291 -~~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 291 -AHPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp -SSEEEEEEETTEEEEEES
T ss_pred -CCCEEEEEeCCEEEEecC
Confidence 135677889999999873
No 122
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.47 E-value=3.7 Score=41.19 Aligned_cols=141 Identities=9% Similarity=0.002 Sum_probs=72.2
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEeecceEEeec--CcceEecCCcCceeecCCCCcCc-cCceEEEEEcCCCCc
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGANGFFFTTT--PRFGFSRILNTSWHLTSPLRFSR-INPLVGVFYDHDRGH 154 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g~i~v~g--g~~~ynp~~~~~W~~~~~~~~~r-~~~~~~~~~~~~~~~ 154 (392)
..+..||+.+.++... ....+..-..+...+|.|++.. |.++||+. +++.+......... .........+.
T Consensus 82 ~Gl~~yd~~~~~f~~~-~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~d~---- 155 (758)
T 3ott_A 82 NGILVYNYRADRYEQP-ETDFPTDVRTMALQGDTLWLGALNGLYTYQLQ-SRKLTSFDTRRNGLPNNTIYSIIRTK---- 155 (758)
T ss_dssp TEEEEEETTTTEECCC-SCCCCSCEEEEEEETTEEEEEETTEEEEEETT-TCCEEEECHHHHCCSCSCEEEEEECT----
T ss_pred CCeEEEeCCCCEEECc-ccCCCceEEEEEecCCcEEEEcCCcceeEeCC-CCeEEEeccCCCCcCCCeEEEEEEcC----
Confidence 3478899998876541 1111111113334578888764 57899998 67776552211110 11112222222
Q ss_pred ccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-CC-EEEEEee
Q 016239 155 CDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-RG-RFYVFGI 232 (392)
Q Consensus 155 ~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~g-~ly~~gg 232 (392)
++.+++... ..+..||+.+++.+.... +...... ...-.+.... ++ .|++ |.
T Consensus 156 ----------~g~lWigt~-------------~Gl~~~~~~~~~~~~~~~-~~~~~~~-~~~i~~i~~d~~~~~lWi-gt 209 (758)
T 3ott_A 156 ----------DNQIYVGTY-------------NGLCRYIPSNGKFEGIPL-PVHSSQS-NLFVNSLLEDTTRQCVWI-GT 209 (758)
T ss_dssp ----------TCCEEEEET-------------TEEEEEETTTTEEEEECC-CCCTTCS-SCCEEEEEEETTTTEEEE-EE
T ss_pred ----------CCCEEEEeC-------------CCHhhCccCCCceEEecC-CCccccc-cceeEEEEEECCCCEEEE-EE
Confidence 667887421 147788888877765431 1110000 0000122222 23 4555 44
Q ss_pred cccEEEEEECCCCceeecc
Q 016239 233 YSFSVSSFDLKKHVWSEVQ 251 (392)
Q Consensus 233 ~~~~i~~yd~~~~~W~~i~ 251 (392)
. +.+..||+.++++....
T Consensus 210 ~-~Gl~~~~~~~~~~~~~~ 227 (758)
T 3ott_A 210 E-GYLFQYFPSTGQIKQTE 227 (758)
T ss_dssp E-EEEEEEETTTTEEEEEE
T ss_pred C-CCCeEEcCCCCeEEecc
Confidence 3 46899999998887653
No 123
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.37 E-value=4.2 Score=36.41 Aligned_cols=169 Identities=7% Similarity=-0.070 Sum_probs=80.4
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcc-eEEee--cceEEeecC----cceEecCCcCceeecCCCCcCccCceEEEEEcC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGS-CFIGA--NGFFFTTTP----RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDH 150 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~--~g~i~v~gg----~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~ 150 (392)
..+.+||..+.+.............. +++.. ++.+++.++ +.+||.. ++....+............+.+. .
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~-~ 173 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS-GSVIQVFAKTDSWDYWYCCVDVS-V 173 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT-SCEEEEEECCCCSSCCEEEEEEE-T
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC-CCceEEEeccCCCCCCeEEEEEC-C
Confidence 35778888876655432221122222 23332 345555543 3677876 45444333222111111222221 1
Q ss_pred CCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCE-E
Q 016239 151 DRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGR-F 227 (392)
Q Consensus 151 ~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~-l 227 (392)
+++.++.|+. ...+.+||.....-..+...... ...+.+ ++. +
T Consensus 174 --------------~~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~h~~~---------v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 174 --------------SRQMLATGDS-----------TGRLLLLGLDGHEIFKEKLHKAK---------VTHAEFNPRCDWL 219 (383)
T ss_dssp --------------TTTEEEEEET-----------TSEEEEEETTSCEEEEEECSSSC---------EEEEEECSSCTTE
T ss_pred --------------CCCEEEEECC-----------CCCEEEEECCCCEEEEeccCCCc---------EEEEEECCCCCCE
Confidence 5566666654 12688888743332222211111 223333 344 7
Q ss_pred EEEeecccEEEEEECCCC----ceeecccCCCCcccceeEEee-CCeEEEEEeecCCCCCceeEEE
Q 016239 228 YVFGIYSFSVSSFDLKKH----VWSEVQTLRPPGVMFSFLIAS-PNMLVLAGMCNAPRGPSFNLWK 288 (392)
Q Consensus 228 y~~gg~~~~i~~yd~~~~----~W~~i~~~~~~~~~~~~~~~~-~g~l~v~gg~~~~~~~~~~v~~ 288 (392)
++.|+.++.|..||+.+. ...... ............. ++++++.++.++ .+.+|.
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~----~i~iwd 279 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRN----EIRVYS 279 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSS----EEEEEE
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCC----cEEEEE
Confidence 888888899999999873 222211 1111111111223 677777776433 677773
No 124
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.36 E-value=3.7 Score=35.67 Aligned_cols=64 Identities=8% Similarity=0.199 Sum_probs=37.4
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCccc-ceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVM-FSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~-~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
++.+.+.|+.++.|..+|..+.+-.. .+...... .......++.+++.|+.++ .+.+| |..+.+
T Consensus 197 ~~~~l~s~s~D~~i~iWd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~s~s~Dg----~i~iW--d~~~~~ 261 (304)
T 2ynn_A 197 DKPYMITASDDLTIKIWDYQTKSCVA--TLEGHMSNVSFAVFHPTLPIIISGSEDG----TLKIW--NSSTYK 261 (304)
T ss_dssp TCCEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEECSSSSEEEEEETTS----CEEEE--ETTTCC
T ss_pred CCCEEEEEcCCCeEEEEeCCCCccce--eeCCCCCCEEEEEECCCCCEEEEEcCCC----eEEEE--ECCCCc
Confidence 45677788888999999998764322 11111111 1112233667777776543 68888 665443
No 125
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.29 E-value=1.2 Score=39.06 Aligned_cols=25 Identities=4% Similarity=-0.081 Sum_probs=15.5
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCcee
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWF 91 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~ 91 (392)
+..+|+.... ...+..+|+.+.+-.
T Consensus 45 g~~l~v~~~~-----~~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 45 GRIAYATVNK-----SESLVKIDLVTGETL 69 (337)
T ss_dssp SSEEEEEETT-----TTEEEEEETTTCCEE
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCCeE
Confidence 3466665432 146888998877643
No 126
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.24 E-value=4.9 Score=36.74 Aligned_cols=53 Identities=6% Similarity=0.047 Sum_probs=32.0
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCcee
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWS 248 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~ 248 (392)
++.+||..++.-... +... ... ...+.. ++.+++.|+.++.|..||..+.+..
T Consensus 215 ~i~~wd~~~~~~~~~--~~~h-~~~-----v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 215 TIKMWEVQTGYCVKT--FTGH-REW-----VRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp EEEEEETTTCCEEEE--EECC-SSC-----EEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred eEEEEECCCCcEEEE--EeCC-Ccc-----EEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 688899877653211 1110 100 122222 5778888888899999999876543
No 127
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.17 E-value=4.1 Score=36.52 Aligned_cols=101 Identities=9% Similarity=-0.165 Sum_probs=53.8
Q ss_pred eEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-CCEEEEEee----------------cccEEEEEECCCCceee
Q 016239 187 LAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-RGRFYVFGI----------------YSFSVSSFDLKKHVWSE 249 (392)
Q Consensus 187 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~g~ly~~gg----------------~~~~i~~yd~~~~~W~~ 249 (392)
..+.++|..+++.+.+...+.. .....- +|+++++.+ ....|+.+|+.+++...
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~~~---------~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMVMPPC---------SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK 334 (396)
T ss_dssp EEEEEECTTTCCEEEEEECCSE---------EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCE
T ss_pred ceEEEEECCCCCeEEeeeCCCC---------CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE
Confidence 3589999988876665433211 211222 677666543 12579999998887665
Q ss_pred cccCCCCc---------ccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 250 VQTLRPPG---------VMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 250 i~~~~~~~---------~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
+....... .........+|+.+++..... ....+|.+|..+..++++
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~---~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 335 LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE---GVPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT---SSCEEEEEECCTTCC---
T ss_pred ccCCCCccccccccccCCCCCceEccCCCeEEEEecCC---CCceEEEEEEcccccccc
Confidence 53322100 011112334565444443221 146799999888776654
No 128
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.14 E-value=0.63 Score=43.15 Aligned_cols=107 Identities=9% Similarity=0.034 Sum_probs=60.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
+..+++.|+.+ .++.+||..++.-...-..... .. .-.+.+.. ++.+++.|+.++.|..+|+
T Consensus 131 ~~~~lasGs~d-----------g~i~lWd~~~~~~~~~~~~~gH-~~----~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 131 HPSTVAVGSKG-----------GDIMLWNFGIKDKPTFIKGIGA-GG----SITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp CTTCEEEEETT-----------SCEEEECSSCCSCCEEECCCSS-SC----CCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCCEEEEEeCC-----------CEEEEEECCCCCceeEEEccCC-CC----CEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 56677777652 1588888876654332221111 11 01223332 5677778888899999999
Q ss_pred CCCceeecccCCCCcccceeE-EeeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 243 KKHVWSEVQTLRPPGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
.++....+............+ ...++++++.|+.++ .+.+| |..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg----~i~~w--d~~~ 240 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG----NVILL--NMDG 240 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS----BEEEE--ESSS
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC----cEeee--ccCc
Confidence 887766554332222222222 334777888776443 67777 5544
No 129
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.98 E-value=6 Score=37.04 Aligned_cols=103 Identities=11% Similarity=0.074 Sum_probs=58.4
Q ss_pred ECCEEEEEeecccEEEEEECCCCceee--ccc-CCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 223 FRGRFYVFGIYSFSVSSFDLKKHVWSE--VQT-LRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 223 ~~g~ly~~gg~~~~i~~yd~~~~~W~~--i~~-~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
.+|++|+|-|. ..+++|...+.+.. |.. .+..+....++...++++|++-| .++|+|+... ..+.+
T Consensus 268 ~~G~tYFFKg~--~yWR~~~~~~~~~p~~Is~~WpglP~~IDAAf~~~~~~yfFkG--------~~yw~f~~~~-g~~~~ 336 (460)
T 1qhu_A 268 NHGATYVFSGS--HYWRLDTNRDGWHSWPIAHQWPQGPSTVDAAFSWEDKLYLIQD--------TKVYVFLTKG-GYTLV 336 (460)
T ss_dssp TTCCEEEEETT--EEEECTTGGGCCCCEEGGGTCTTSCSSCSEEEEETTEEEEEET--------TEEEEEECSB-SCEEC
T ss_pred CCCeEEEEeCC--EEEEEecCCCCcCccchhhhccCCCCCCcEEEEECCeEEEEeC--------CEEEEEeCCC-Cceec
Confidence 47899999873 67888876543322 211 11111223334556899999864 3688888653 24566
Q ss_pred ccCCHHHHHhhcCCccc--CccceeEEEE-eCCEEEEEecc
Q 016239 300 AIMPHDFLYSLVDTEED--DKFASLKCVG-LGNLIYVFNEE 337 (392)
Q Consensus 300 ~~~p~~~~~~~~~~~~~--~~~~~~~~~~-~~~~i~v~gg~ 337 (392)
...|..+...+ +.... ...-..++.. ..+++|++-|.
T Consensus 337 ~GyPK~I~~~l-Glp~~~~~~~IDAA~~~~~~~ktyfFkG~ 376 (460)
T 1qhu_A 337 NGYPKRLEKEL-GSPPVISLEAVDAAFVCPGSSRLHIMAGR 376 (460)
T ss_dssp TTCCEEHHHHH-CCCSSCCCSCCCEEECCTTCCEEEEEETT
T ss_pred CCCCeEHHHhc-cCCCccccCcccEEEEeCCCCEEEEEECC
Confidence 66666664333 43322 1112223322 46899999874
No 130
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.83 E-value=4.8 Score=36.46 Aligned_cols=24 Identities=13% Similarity=0.086 Sum_probs=19.4
Q ss_pred CCEEEEEeecccEEEEEECCCCce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVW 247 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W 247 (392)
++..++.|+.++.|..||+.+.+-
T Consensus 192 ~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 192 RGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEcCCCcEEEeECCCCce
Confidence 577777888888999999987653
No 131
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.79 E-value=4.6 Score=40.01 Aligned_cols=111 Identities=12% Similarity=0.159 Sum_probs=67.0
Q ss_pred EEeecceEEeecC---cceEecCCcC--ceeecCCCCcC--------ccCceEEEEEcCCCCcccccCCcccCCCeEEEE
Q 016239 105 FIGANGFFFTTTP---RFGFSRILNT--SWHLTSPLRFS--------RINPLVGVFYDHDRGHCDLASGFACNLPKFIVV 171 (392)
Q Consensus 105 ~~~~~g~i~v~gg---~~~ynp~~~~--~W~~~~~~~~~--------r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~ 171 (392)
.++.+|.||+.+. ++.+|.. ++ .|+.-...+.. ....+.++. +++||+.
T Consensus 73 P~v~~g~vyv~~~~~~v~AlD~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-----------------~~~v~v~ 134 (677)
T 1kb0_A 73 PVVVDGIMYVSASWSVVHAIDTR-TGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-----------------KGKVYVG 134 (677)
T ss_dssp CEEETTEEEEECGGGCEEEEETT-TTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-----------------TTEEEEE
T ss_pred CEEECCEEEEECCCCeEEEEECC-CCcEEEEEcCCCCccccccccccCCCCCceEE-----------------CCEEEEE
Confidence 3456899998754 4788987 45 68764433211 111233444 7888886
Q ss_pred eceeecCcccccccceEEEEEeCCCCC--eecCCC-C-CCCCCCCCCccceeeEEECCEEEEEee-----cccEEEEEEC
Q 016239 172 GGVRFIGGLVDIEDRLAVEIYDPHSDS--WELCPP-L-PADFRSGYSSQYLSSALFRGRFYVFGI-----YSFSVSSFDL 242 (392)
Q Consensus 172 gG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~-~-~~~~~~~~~~~~~~~~~~~g~ly~~gg-----~~~~i~~yd~ 242 (392)
... ..+..+|..+++ |+.-.. - +..... ..+.++.++.+|+..+ ..+.|.+||.
T Consensus 135 ~~d------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~-----~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~ 197 (677)
T 1kb0_A 135 AWD------------GRLIALDAATGKEVWHQNTFEGQKGSLTI-----TGAPRVFKGKVIIGNGGAEYGVRGYITAYDA 197 (677)
T ss_dssp CTT------------SEEEEEETTTCCEEEEEETTTTCCSSCBC-----CSCCEEETTEEEECCBCTTTCCBCEEEEEET
T ss_pred cCC------------CEEEEEECCCCCEEeeecCCcCcCcCccc-----ccCcEEECCEEEEEecccccCCCCEEEEEEC
Confidence 432 158888887764 875432 1 111011 1455677899988754 2578999999
Q ss_pred CCC--ceeec
Q 016239 243 KKH--VWSEV 250 (392)
Q Consensus 243 ~~~--~W~~i 250 (392)
.+. .|+.-
T Consensus 198 ~tG~~~W~~~ 207 (677)
T 1kb0_A 198 ETGERKWRWF 207 (677)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 776 47654
No 132
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.56 E-value=0.82 Score=41.09 Aligned_cols=135 Identities=12% Similarity=0.095 Sum_probs=64.3
Q ss_pred cceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCC
Q 016239 118 RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSD 197 (392)
Q Consensus 118 ~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~ 197 (392)
+.+||.. ++.|+.+..+.........+.+ .+ ++++++.|+.+ ..+.+||..++
T Consensus 35 i~iw~~~-~~~~~~~~~~~~h~~~v~~~~~-s~--------------~~~~l~s~s~d-----------~~v~vwd~~~~ 87 (377)
T 3dwl_C 35 VELYEQD-GNGWKHARTFSDHDKIVTCVDW-AP--------------KSNRIVTCSQD-----------RNAYVYEKRPD 87 (377)
T ss_dssp BCEEEEE-TTEEEECCCBCCCSSCEEEEEE-CT--------------TTCCEEEEETT-----------SSEEEC-----
T ss_pred EEEEEcc-CCceEEEEEEecCCceEEEEEE-eC--------------CCCEEEEEeCC-----------CeEEEEEcCCC
Confidence 3678887 6777666655432222222222 11 45566666541 25888888777
Q ss_pred C-eecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCc-eeecccCCC-CcccceeEE-eeCCeEE
Q 016239 198 S-WELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHV-WSEVQTLRP-PGVMFSFLI-ASPNMLV 271 (392)
Q Consensus 198 ~-W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~-W~~i~~~~~-~~~~~~~~~-~~~g~l~ 271 (392)
. |.....+... ... ...+.+ ++.+++.|+..+.|..||..+.+ |..+..... .......+. ..+++++
T Consensus 88 ~~~~~~~~~~~~-~~~-----v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 88 GTWKQTLVLLRL-NRA-----ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp -CCCCEEECCCC-SSC-----EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred CceeeeeEeccc-CCc-----eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 6 5444322221 111 222222 57778888888899999998765 433332222 111112222 2366777
Q ss_pred EEEeecCCCCCceeEEEe
Q 016239 272 LAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 272 v~gg~~~~~~~~~~v~~~ 289 (392)
+.|+.++ .+.+|.+
T Consensus 162 ~~~~~d~----~i~iwd~ 175 (377)
T 3dwl_C 162 AAGCADR----KAYVLSA 175 (377)
T ss_dssp EEEESSS----CEEEEEE
T ss_pred EEEeCCC----EEEEEEE
Confidence 7776443 5777754
No 133
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.55 E-value=5.7 Score=35.74 Aligned_cols=62 Identities=6% Similarity=-0.061 Sum_probs=34.2
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEee-CCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS-PNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~-~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
++.+++.++..+.|..||..+.+-...-... ......+... ++ +++.++.++ .+.+| |..+.
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~-~l~~~~~d~----~i~i~--d~~~~ 320 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGNSQNCFYGH--SQSIVSASWVGDD-KVISCSMDG----SVRLW--SLKQN 320 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBSCSEEECCC--SSCEEEEEEETTT-EEEEEETTS----EEEEE--ETTTT
T ss_pred CCCEEEEEcCCCEEEEEECCCCccceEecCC--CccEEEEEECCCC-EEEEEeCCC----cEEEE--ECCCC
Confidence 5677778888889999998876432221111 1112223333 55 555554332 56666 65544
No 134
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=92.36 E-value=5.5 Score=35.09 Aligned_cols=189 Identities=11% Similarity=0.029 Sum_probs=89.4
Q ss_pred ceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeecC----cceEecCCcC--ceeecCCCC-----cCcc-CceEE
Q 016239 79 QSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTTP----RFGFSRILNT--SWHLTSPLR-----FSRI-NPLVG 145 (392)
Q Consensus 79 ~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~gg----~~~ynp~~~~--~W~~~~~~~-----~~r~-~~~~~ 145 (392)
.+..+|+.+.+.........-.....++.. +|.+|+... +.+||+. ++ .-..+.... .... ....+
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPH-SKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTT-CSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCC-CCeEEEEEecccCCCCCCccccCCCcEE
Confidence 578889877665332110000112344444 777888753 3678876 33 122222111 1111 12222
Q ss_pred EEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCC-------CCCCCCCCCccce
Q 016239 146 VFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPL-------PADFRSGYSSQYL 218 (392)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-------~~~~~~~~~~~~~ 218 (392)
.+ + .+++.+|+..+. ....+.+||+....-..+... +..+.. ..
T Consensus 149 a~-~-------------~~~g~lyv~d~~----------~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~-----p~ 199 (329)
T 3fvz_A 149 AV-E-------------PSTGAVFVSDGY----------CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSV-----PH 199 (329)
T ss_dssp EE-C-------------TTTCCEEEEECS----------SCCEEEEECTTSCEEEEECEECCSSSCCTTEESC-----EE
T ss_pred EE-e-------------CCCCeEEEEeCC----------CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCC-----Cc
Confidence 22 1 116789998642 122688888644332333210 111011 13
Q ss_pred eeEEE-C-CEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCC-CCCceeEEEeecCccc
Q 016239 219 SSALF-R-GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAP-RGPSFNLWKVDELSME 295 (392)
Q Consensus 219 ~~~~~-~-g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~-~~~~~~v~~~d~~~~~ 295 (392)
..++. + +.||+.....+.|..||+.+.+....-..+........+....+.++...|.... ......++.+|..+.+
T Consensus 200 gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 200 SLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE 279 (329)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC
T ss_pred EEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe
Confidence 33443 4 8999998888899999998666544322121111111223333566665542111 1113355555766555
Q ss_pred eE
Q 016239 296 FS 297 (392)
Q Consensus 296 W~ 297 (392)
..
T Consensus 280 ~~ 281 (329)
T 3fvz_A 280 II 281 (329)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 135
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.35 E-value=4.9 Score=34.55 Aligned_cols=23 Identities=17% Similarity=0.060 Sum_probs=18.5
Q ss_pred CCEEEEEeecccEEEEEECCCCc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~ 246 (392)
++...+.++.++.|..||..+.+
T Consensus 161 ~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 161 DGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp TSSEEEEEETTSCEEEEESSCBT
T ss_pred CCCEEEEEecCcceeEEECCCCc
Confidence 56777788888899999997754
No 136
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.35 E-value=5.8 Score=35.35 Aligned_cols=64 Identities=14% Similarity=0.093 Sum_probs=38.2
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
++.+++.|+.++.|..||+.+.+....-..... .........++.+++.|+.+. .+.+| |..+.
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~~~p~~~~l~s~s~D~----~v~lw--d~~~~ 272 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES-DVNSVRYYPSGDAFASGSDDA----TCRLY--DLRAD 272 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTS----CEEEE--ETTTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-CeEEEEEeCCCCEEEEEeCCC----eEEEE--ECCCC
Confidence 357888899899999999988764332111111 111111223677777776543 67888 65544
No 137
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.31 E-value=5 Score=34.52 Aligned_cols=184 Identities=9% Similarity=-0.022 Sum_probs=88.5
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee-cceEEeec----CcceEecCCcCceeecCCCCcC-cc-CceEEEEEcC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA-NGFFFTTT----PRFGFSRILNTSWHLTSPLRFS-RI-NPLVGVFYDH 150 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~g~i~v~g----g~~~ynp~~~~~W~~~~~~~~~-r~-~~~~~~~~~~ 150 (392)
..++.||+.++ ...+.... ....+++.. +|.+|+.. ++.+||+. +++.+.+...... .. ......+ ++
T Consensus 50 ~~i~~~~~~~~-~~~~~~~~--~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~i~~-d~ 124 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHPS--HHQNGHCLNKQGHLIACSHGLRRLERQREP-GGEWESIADSFEGKKLNSPNDVCL-AP 124 (296)
T ss_dssp TEEEEEETTSC-EEEEESSC--SSEEEEEECTTCCEEEEETTTTEEEEECST-TCCEEEEECEETTEECCCCCCEEE-CT
T ss_pred CEEEEEECCCC-eEEEECCC--CCcceeeECCCCcEEEEecCCCeEEEEcCC-CCcEEEEeeccCCCCCCCCCCEEE-CC
Confidence 46888999877 54443211 112244443 67777764 25889997 5666554322111 11 1111122 12
Q ss_pred CCCcccccCCcccCCCeEEEE----eceeecCccc--ccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-
Q 016239 151 DRGHCDLASGFACNLPKFIVV----GGVRFIGGLV--DIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF- 223 (392)
Q Consensus 151 ~~~~~~~~~~~~~~~~~iyv~----gG~~~~~~~~--~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~- 223 (392)
++++|+. |......... .......++.+|+. ++-+.+.... .. ...+.+
T Consensus 125 --------------~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~---~~------~~gi~~s 180 (296)
T 3e5z_A 125 --------------DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR---VK------PNGLAFL 180 (296)
T ss_dssp --------------TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC---SS------EEEEEEC
T ss_pred --------------CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC---CC------CccEEEC
Confidence 6788886 3311000000 00012368888886 5544432111 11 233333
Q ss_pred -CCEEEEEeecccEEEEEECC-CCce-eecccC-CCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 224 -RGRFYVFGIYSFSVSSFDLK-KHVW-SEVQTL-RPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 224 -~g~ly~~gg~~~~i~~yd~~-~~~W-~~i~~~-~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
+|++++.....+.|++||+. +++. ...... .....-....+..+|+||+.. . ..|++||++...-..
T Consensus 181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~------~~v~~~~~~g~~~~~ 251 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--G------DGVHVLTPDGDELGR 251 (296)
T ss_dssp TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--T------TEEEEECTTSCEEEE
T ss_pred CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--C------CeEEEECCCCCEEEE
Confidence 56666666666799999986 4554 211111 111111122234488888876 1 245566887554333
No 138
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=92.28 E-value=5.5 Score=34.97 Aligned_cols=65 Identities=11% Similarity=0.198 Sum_probs=35.7
Q ss_pred CCEEEEEeecccEEEEEECCC-CceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKK-HVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~-~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
++..++.|+..+.|..||+.+ .+-...-.... ..........++.+++.++.++ .+.+| |..+.+
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~----~i~v~--d~~~~~ 251 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE-KSISDMQFSPDLTYFITSSRDT----NSFLV--DVSTLQ 251 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCS-SCEEEEEECTTSSEEEEEETTS----EEEEE--ETTTCC
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC-CceeEEEECCCCCEEEEecCCc----eEEEE--ECCCCc
Confidence 567778888889999999987 33221111111 1111112223677777765432 56666 655543
No 139
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.26 E-value=1.8 Score=41.98 Aligned_cols=126 Identities=11% Similarity=0.093 Sum_probs=69.4
Q ss_pred eeeEEECCEEEEEeecccEEEEEEC-CCC--ceeecccCCCC-------cccceeEEeeCCeEEEEEeecCCCCCceeEE
Q 016239 218 LSSALFRGRFYVFGIYSFSVSSFDL-KKH--VWSEVQTLRPP-------GVMFSFLIASPNMLVLAGMCNAPRGPSFNLW 287 (392)
Q Consensus 218 ~~~~~~~g~ly~~gg~~~~i~~yd~-~~~--~W~~i~~~~~~-------~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~ 287 (392)
.+.++.++.+|+.+...+.|+++|. .+. .|+.-...... .......+..+++||+... ...++
T Consensus 56 ~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~ 128 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLL 128 (571)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEE
T ss_pred cccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEE
Confidence 4556789999998764578999998 665 68764322110 0111234567888887642 24577
Q ss_pred EeecCcc--ceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeec
Q 016239 288 KVDELSM--EFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 288 ~~d~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
.+|..+. .|+.-..-+... .. ...+-++.+++||+-.........-.++-+|.++++ ..|+.-
T Consensus 129 alD~~tG~~~W~~~~~~~~~~----~~-------~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~--~~W~~~ 193 (571)
T 2ad6_A 129 ALDAKTGKINWEVEVCDPKVG----ST-------LTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGE--LKWRAF 193 (571)
T ss_dssp EEETTTCCEEEEEECCCGGGT----CB-------CCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCC--EEEEEE
T ss_pred EEECCCCCEEEEecCCCCCcc----ce-------eccCCEEECCEEEEEecCCccCCCCEEEEEECCCCc--EEEEEc
Confidence 7887654 487432211110 00 112334568888876532111111233445888776 568654
No 140
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.19 E-value=5.4 Score=34.68 Aligned_cols=51 Identities=12% Similarity=0.043 Sum_probs=31.0
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCc
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~ 246 (392)
.+.+||..+.+-...-.... .. ..++.+ ++.+++.|+.++.|..||..+.+
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~---~~-----v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHT---GY-----LNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp CEEEEETTTTEEEEEECCCS---SC-----EEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred EEEEEECCCCceeeEecCCC---Cc-----EEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 57788887654332211111 10 222333 57888889988999999997764
No 141
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.14 E-value=7.7 Score=36.29 Aligned_cols=53 Identities=11% Similarity=0.193 Sum_probs=32.2
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeC--CCCCCCCCcceEEeecceEEeecCc--ceEecC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHL--PPAQEPRAGSCFIGANGFFFTTTPR--FGFSRI 124 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~r~~~~~~~~~g~i~v~gg~--~~ynp~ 124 (392)
++.+|++.| +..|.||..+++.... +.++ . --++....|.+|++-|. ++||+.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~~y~rfd~~ 214 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGNQFLRFNPV 214 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETTEEEEECTT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECCEEEEEcCc
Confidence 445566655 5678899887654321 2222 1 12344447889998775 888876
No 142
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.07 E-value=10 Score=37.50 Aligned_cols=97 Identities=15% Similarity=0.103 Sum_probs=56.4
Q ss_pred ceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEee---cccEEEEEECCCCc---eeecccCCCCccc
Q 016239 186 RLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGI---YSFSVSSFDLKKHV---WSEVQTLRPPGVM 259 (392)
Q Consensus 186 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg---~~~~i~~yd~~~~~---W~~i~~~~~~~~~ 259 (392)
...++++|..++.|+.+..-... . ...+..+|.+|+... ....|+.+|+.+.. |+.+....+.. .
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~---~-----~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~ 321 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGA---K-----YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA-S 321 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSC---C-----EEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC-E
T ss_pred ceEEEEEcCCCCceEEeecCCCc---e-----EEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC-e
Confidence 34677777767778776532111 1 233335666666654 23689999997654 77764433211 1
Q ss_pred ceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 260 FSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 260 ~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
...+...+++|++....+. ...+|.++.....
T Consensus 322 l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~ 353 (695)
T 2bkl_A 322 LLSVSIVGGHLSLEYLKDA----TSEVRVATLKGKP 353 (695)
T ss_dssp EEEEEEETTEEEEEEEETT----EEEEEEEETTCCE
T ss_pred EEEEEEECCEEEEEEEECC----EEEEEEEeCCCCe
Confidence 1223334888887765433 5788888865443
No 143
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.06 E-value=2.6 Score=37.70 Aligned_cols=105 Identities=12% Similarity=0.081 Sum_probs=54.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CC-EEEEEeecccEEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RG-RFYVFGIYSFSVSSFD 241 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g-~ly~~gg~~~~i~~yd 241 (392)
+++.++.|+.+ .++.++|..+++-. ..+... ... ...+.+ ++ .+++.|+.++.|..||
T Consensus 138 dg~~l~sgs~d-----------~~i~iwd~~~~~~~--~~~~~h-~~~-----V~~~~~~~~~~~~l~s~s~D~~v~iwd 198 (344)
T 4gqb_B 138 SGTQAVSGSKD-----------ICIKVWDLAQQVVL--SSYRAH-AAQ-----VTCVAASPHKDSVFLSCSEDNRILLWD 198 (344)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTTEEE--EEECCC-SSC-----EEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCcEE--EEEcCc-CCc-----eEEEEecCCCCCceeeecccccccccc
Confidence 56667776642 25888888776422 111111 110 222232 33 5778888889999999
Q ss_pred CCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 242 LKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 242 ~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
+.+.+-...-...........+.. .++++++.|+.++ .+.+| |..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg----~v~~w--d~~~~ 247 (344)
T 4gqb_B 199 TRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG----TVSLV--DTKST 247 (344)
T ss_dssp TTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS----EEEEE--ESCC-
T ss_pred ccccceeeeeecceeeccceeeeecCCCCcceEEeccCC----cEEEE--ECCCC
Confidence 987654332111111111122222 2567777776443 67777 65543
No 144
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.05 E-value=5 Score=34.00 Aligned_cols=145 Identities=7% Similarity=-0.082 Sum_probs=76.1
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeec--ccEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIY--SFSVSSF 240 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~--~~~i~~y 240 (392)
++++|+.-.. ...+.+++.....-+.+..... .. ....++. ++.||+.... .+.|+++
T Consensus 90 ~~~lyv~d~~-----------~~~I~~~~~~g~~~~~~~~~~~--~~-----P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 90 GRTIFWTDSQ-----------LDRIEVAKMDGTQRRVLFDTGL--VN-----PRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTSCSCEEEECSSC--SS-----EEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CCeEEEEECC-----------CCEEEEEEcCCCCEEEEEECCC--CC-----ccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 5789987432 2267888876443222211111 11 1333443 5899998754 4689999
Q ss_pred ECCCCceeecccCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCc
Q 016239 241 DLKKHVWSEVQTLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDK 318 (392)
Q Consensus 241 d~~~~~W~~i~~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~ 318 (392)
++....-+.+..... .....++.. +++||+.... ...|+++|..+..-..+.. ..
T Consensus 152 ~~dg~~~~~~~~~~~--~~P~gia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~--~~------------- 208 (267)
T 1npe_A 152 HMDGTNRRILAQDNL--GLPNGLTFDAFSSQLCWVDAG------THRAECLNPAQPGRRKVLE--GL------------- 208 (267)
T ss_dssp ETTSCCCEEEECTTC--SCEEEEEEETTTTEEEEEETT------TTEEEEEETTEEEEEEEEE--CC-------------
T ss_pred ecCCCCcEEEEECCC--CCCcEEEEcCCCCEEEEEECC------CCEEEEEecCCCceEEEec--CC-------------
Confidence 986543333321111 112223332 5788887632 3467777876543222211 00
Q ss_pred cceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCc
Q 016239 319 FASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 319 ~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
....+++..++.||+..... . .+..+|+.+.+
T Consensus 209 ~~P~gi~~d~~~lyva~~~~---~--~v~~~d~~~g~ 240 (267)
T 1npe_A 209 QYPFAVTSYGKNLYYTDWKT---N--SVIAMDLAISK 240 (267)
T ss_dssp CSEEEEEEETTEEEEEETTT---T--EEEEEETTTTE
T ss_pred CCceEEEEeCCEEEEEECCC---C--eEEEEeCCCCC
Confidence 12456666799999987421 1 23445777655
No 145
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.98 E-value=5.7 Score=34.43 Aligned_cols=64 Identities=9% Similarity=0.106 Sum_probs=34.6
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe---eCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA---SPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~---~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
++.+++.|+.++.|..||+.+.+-........ ......+.. .++.+++.|+.+. .+.+| |..+.
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D~----~i~iW--d~~~~ 218 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDL----TIKIW--DYQTK 218 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEEEETTS----EEEEE--ETTTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEEEcCCC----eEEEE--eCCCC
Confidence 45788889989999999986543211100011 111111111 1556666665443 68888 65544
No 146
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.98 E-value=2.3 Score=37.57 Aligned_cols=62 Identities=10% Similarity=0.106 Sum_probs=35.8
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCC-Ccc-cceeEEe-e--CCeEEEEEeecCCCCCceeEEEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRP-PGV-MFSFLIA-S--PNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~-~~~-~~~~~~~-~--~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
.+.+++.|+.++.|..||..++.|..+..... ... ....+.. . ++++++.|+.++ .+.+|.+
T Consensus 260 ~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg----~v~~W~~ 326 (330)
T 2hes_X 260 FNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG----IVNFWSL 326 (330)
T ss_dssp TTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS----EEEEEEC
T ss_pred CCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC----cEEEEEe
Confidence 45566778888899999998888866533221 111 1112221 1 467777776543 6888843
No 147
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.82 E-value=5.2 Score=35.80 Aligned_cols=105 Identities=7% Similarity=-0.059 Sum_probs=59.1
Q ss_pred eEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCC
Q 016239 167 KFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 167 ~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++++.|+.+ ..+.+||..+......-..... .. .-.+.+.. ++.+++.++.++.|..+|+.+
T Consensus 87 ~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~h-~~----~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 87 TTVAVGSKG-----------GDIILWDYDVQNKTSFIQGMGP-GD----AITGMKFNQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp TEEEEEEBT-----------SCEEEEETTSTTCEEEECCCST-TC----BEEEEEEETTEEEEEEEEETTTEEEEEETTS
T ss_pred CEEEEEcCC-----------CeEEEEeCCCcccceeeecCCc-CC----ceeEEEeCCCCCCEEEEEeCCCEEEEEECCC
Confidence 677776641 2588899887766544322111 11 11233333 457788888889999999998
Q ss_pred CceeecccCCCCcc-cceeEEeeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 245 HVWSEVQTLRPPGV-MFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 245 ~~W~~i~~~~~~~~-~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
+....+........ ........++++++.|+.+. .+.+| |...
T Consensus 151 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~i~--d~~~ 194 (383)
T 3ei3_B 151 SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG----RLLLL--GLDG 194 (383)
T ss_dssp CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTS----EEEEE--ETTS
T ss_pred CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCC----CEEEE--ECCC
Confidence 76665543332111 11222333677777775432 56677 6543
No 148
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=91.58 E-value=4.1 Score=35.79 Aligned_cols=51 Identities=18% Similarity=0.206 Sum_probs=30.9
Q ss_pred CCEEEEEeec----------ccEEEEEECCCCceeecccCCCC-cccceeEEeeCCeEEEEE
Q 016239 224 RGRFYVFGIY----------SFSVSSFDLKKHVWSEVQTLRPP-GVMFSFLIASPNMLVLAG 274 (392)
Q Consensus 224 ~g~ly~~gg~----------~~~i~~yd~~~~~W~~i~~~~~~-~~~~~~~~~~~g~l~v~g 274 (392)
+|.||+.... .+.|.+||+..+.-..+..+... ......++..+++||+..
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEEC
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEee
Confidence 5789888644 46799999975555545432211 112223445689999875
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=91.55 E-value=6.7 Score=34.36 Aligned_cols=136 Identities=10% Similarity=-0.024 Sum_probs=69.1
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEe--ecceEEeecC---cceEecCCcCceeecCCC-Cc-CccCceEEEEEcC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIG--ANGFFFTTTP---RFGFSRILNTSWHLTSPL-RF-SRINPLVGVFYDH 150 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~g~i~v~gg---~~~ynp~~~~~W~~~~~~-~~-~r~~~~~~~~~~~ 150 (392)
..++.+|+.+.+-...-+... .....++. .++.+|+... ..++|+. +++-...-.. .. +........+.
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~s-- 239 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTG-KMSTGLALDSEGKRLYTTNADGELITIDTA-DNKILSRKKLLDDGKEHFFINISLD-- 239 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCC-TTCCCCEEETTTTEEEEECTTSEEEEEETT-TTEEEEEEECCCSSSCCCEEEEEEE--
T ss_pred ceEEEEcCCCCceEEEecCCC-CccceEEECCCCCEEEEEcCCCeEEEEECC-CCeEEEEEEcCCCCCCcccceEEEC--
Confidence 458889988766433212111 11122232 2456777643 4678887 4533221111 11 11111112221
Q ss_pred CCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECC-EEE
Q 016239 151 DRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRG-RFY 228 (392)
Q Consensus 151 ~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g-~ly 228 (392)
.++..+|+.... ...+.+||..+++-...-+.+.+ ...+. -+| .+|
T Consensus 240 ------------~dg~~l~~~~~~-----------~~~v~~~d~~~~~~~~~~~~~~~---------~~~~~s~dg~~l~ 287 (353)
T 3vgz_A 240 ------------TARQRAFITDSK-----------AAEVLVVDTRNGNILAKVAAPES---------LAVLFNPARNEAY 287 (353)
T ss_dssp ------------TTTTEEEEEESS-----------SSEEEEEETTTCCEEEEEECSSC---------CCEEEETTTTEEE
T ss_pred ------------CCCCEEEEEeCC-----------CCEEEEEECCCCcEEEEEEcCCC---------ceEEECCCCCEEE
Confidence 115567776432 23688999877764332222222 12222 244 588
Q ss_pred EEeecccEEEEEECCCCceee
Q 016239 229 VFGIYSFSVSSFDLKKHVWSE 249 (392)
Q Consensus 229 ~~gg~~~~i~~yd~~~~~W~~ 249 (392)
+.+...+.|..||+.+.+...
T Consensus 288 v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 288 VTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEE
T ss_pred EEECCCCeEEEEECCCCeEEE
Confidence 887677899999998876543
No 150
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.48 E-value=6.2 Score=33.89 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=35.7
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCC-eEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPN-MLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g-~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+|.||+.. .+.|.+||+..+....+..... ....+...-++ .||+.. ...+|++++.++.
T Consensus 228 ~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~--~~~~~f~~~d~~~L~v~t--------~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 228 GGLIWASA--GDGVHVLTPDGDELGRVLTPQT--TSNLCFGGPEGRTLYMTV--------STEFWSIETNVRG 288 (296)
T ss_dssp TSCEEEEE--TTEEEEECTTSCEEEEEECSSC--CCEEEEESTTSCEEEEEE--------TTEEEEEECSCCB
T ss_pred CCCEEEEc--CCeEEEECCCCCEEEEEECCCC--ceeEEEECCCCCEEEEEc--------CCeEEEEEccccc
Confidence 68888877 5789999998665555533221 11111111233 567654 2368888887765
No 151
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=91.45 E-value=6.8 Score=34.29 Aligned_cols=127 Identities=13% Similarity=0.018 Sum_probs=67.6
Q ss_pred eEEEEEeCCCCCeecCC-CCCCCCCCCCCccceeeEEE-CC-EEEEEeecccEEEEEECCCC---ceeecccCCCCcccc
Q 016239 187 LAVEIYDPHSDSWELCP-PLPADFRSGYSSQYLSSALF-RG-RFYVFGIYSFSVSSFDLKKH---VWSEVQTLRPPGVMF 260 (392)
Q Consensus 187 ~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~~~~i~~yd~~~~---~W~~i~~~~~~~~~~ 260 (392)
..+.+||+.+++.+.+. .+..+ ...+.. +| .||+.....+.|.+||+... +.+.+...+ . -.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p---------~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~--g-P~ 232 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVP---------GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP--N-PG 232 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCC---------CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS--S-EE
T ss_pred ceEEEEeCCCCEEEEeccCCccC---------cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC--C-CC
Confidence 46889998877655432 11111 222332 34 58888666679999998753 333332221 1 11
Q ss_pred eeEEeeCCeEEEEEeecCCC----CCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEec
Q 016239 261 SFLIASPNMLVLAGMCNAPR----GPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 261 ~~~~~~~g~l~v~gg~~~~~----~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg 336 (392)
...+..+|+||+........ .....|+++|++...-..+. .|.... + ....+++..+++|||.+.
T Consensus 233 gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~-~~~g~~--~--------~~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 233 NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP-LPPPFA--G--------EHFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE-CCTTTT--T--------SCCCEEEEETTEEEEECS
T ss_pred CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE-CCCCCc--c--------ccceEEEEeCCEEEEeec
Confidence 12233478899876431110 01356888898755433332 232110 0 123445567899999864
No 152
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.43 E-value=3 Score=37.38 Aligned_cols=101 Identities=5% Similarity=-0.075 Sum_probs=54.2
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CC-EEEEEeecccEEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RG-RFYVFGIYSFSVSSFD 241 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g-~ly~~gg~~~~i~~yd 241 (392)
++++++.|+.+ ..+.+||..+.+ .+..+... ... ...+.+ ++ .+.+.|+.++.|..||
T Consensus 238 ~~~~la~g~~d-----------~~i~~wd~~~~~--~~~~~~~~-~~~-----v~~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 238 KDDTFACGDET-----------GNVSLVNIKNPD--SAQTSAVH-SQN-----ITGLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp STTEEEEEESS-----------SCEEEEESSCGG--GCEEECCC-SSC-----EEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred ccceEEEeecc-----------cceeEEECCCCc--EeEEEecc-cee-----EEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 56777777642 258888876543 22211111 111 223333 34 5666677788999999
Q ss_pred CCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeec
Q 016239 242 LKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDE 291 (392)
Q Consensus 242 ~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~ 291 (392)
..+.+-.... .-.. ....++. .++++++.++.++ .+.+|.+..
T Consensus 299 ~~~~~~~~~~--~H~~-~V~~vafsP~d~~~l~s~s~Dg----~v~iW~~~~ 343 (357)
T 4g56_B 299 ADFSEVFRDL--SHRD-FVTGVAWSPLDHSKFTTVGWDH----KVLHHHLPS 343 (357)
T ss_dssp TTSCEEEEEC--CCSS-CEEEEEECSSSTTEEEEEETTS----CEEEEECC-
T ss_pred CCCCcEeEEC--CCCC-CEEEEEEeCCCCCEEEEEcCCC----eEEEEECCC
Confidence 9877543321 1111 1122222 3677777776544 688885543
No 153
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=91.04 E-value=7.2 Score=34.21 Aligned_cols=103 Identities=12% Similarity=0.175 Sum_probs=56.8
Q ss_pred CeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECC
Q 016239 166 PKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLK 243 (392)
Q Consensus 166 ~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~ 243 (392)
+++++.|+.+ ..+.+||..+........+... ... ...+.+ ++...+.|+.++.|..||..
T Consensus 54 g~~l~~~~~d-----------g~i~iw~~~~~~~~~~~~~~~h-~~~-----v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 54 GNFLIAGSWA-----------NDVRCWEVQDSGQTIPKAQQMH-TGP-----VLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp SEEEEEEETT-----------SEEEEEEECTTSCEEEEEEEEC-SSC-----EEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceEEEEECCC-----------CcEEEEEcCCCCceeEEEeccc-cCC-----EEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 5777777652 2578888776333221111111 110 222333 67777788888999999999
Q ss_pred CCceeecccCCCCcccceeEE---eeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 244 KHVWSEVQTLRPPGVMFSFLI---ASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 244 ~~~W~~i~~~~~~~~~~~~~~---~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
+.+........ .....+. ..++.+++.++.++ .+.+| |..+.
T Consensus 117 ~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~~~~~dg----~i~vw--d~~~~ 161 (368)
T 3mmy_A 117 SNQAIQIAQHD---APVKTIHWIKAPNYSCVMTGSWDK----TLKFW--DTRSS 161 (368)
T ss_dssp TTEEEEEEECS---SCEEEEEEEECSSCEEEEEEETTS----EEEEE--CSSCS
T ss_pred CCCceeecccc---CceEEEEEEeCCCCCEEEEccCCC----cEEEE--ECCCC
Confidence 88755532211 1112222 34677777776443 57777 65544
No 154
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=90.95 E-value=7.6 Score=33.94 Aligned_cols=103 Identities=12% Similarity=0.079 Sum_probs=53.2
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE----CCEEEEEeecccEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF----RGRFYVFGIYSFSVSSF 240 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~----~g~ly~~gg~~~~i~~y 240 (392)
++.+++.|+. ...+.+||..+..-......... ..+.... ++..++.|+..+.|..|
T Consensus 179 ~~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~~~l~~~~~dg~i~i~ 239 (357)
T 3i2n_A 179 EERVVCAGYD-----------NGDIKLFDLRNMALRWETNIKNG--------VCSLEFDRKDISMNKLVATSLEGKFHVF 239 (357)
T ss_dssp CCCEEEEEET-----------TSEEEEEETTTTEEEEEEECSSC--------EEEEEESCSSSSCCEEEEEESTTEEEEE
T ss_pred CCCEEEEEcc-----------CCeEEEEECccCceeeecCCCCc--------eEEEEcCCCCCCCCEEEEECCCCeEEEE
Confidence 5566666654 12688899877653222211111 1223332 56778888888899999
Q ss_pred ECCCCceeec-c--cCCCCcccceeEE-eeCCe-EEEEEeecCCCCCceeEEEee
Q 016239 241 DLKKHVWSEV-Q--TLRPPGVMFSFLI-ASPNM-LVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 241 d~~~~~W~~i-~--~~~~~~~~~~~~~-~~~g~-l~v~gg~~~~~~~~~~v~~~d 290 (392)
|..+.+-... . ...........+. ..++. +++.|+.++ .+.+|.++
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~iwd~~ 290 (357)
T 3i2n_A 240 DMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG----GLHLWKYE 290 (357)
T ss_dssp EEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS----EEEEEEEE
T ss_pred eCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC----cEEEeecC
Confidence 9876431111 0 0001111112222 23556 666665433 68888664
No 155
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=90.95 E-value=7.7 Score=34.00 Aligned_cols=22 Identities=9% Similarity=0.063 Sum_probs=17.5
Q ss_pred CCEEEEEeecccEEEEEECCCC
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKH 245 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~ 245 (392)
.+.+++.++..+.|..||+.+.
T Consensus 240 ~~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 240 LGDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp ETTEEEEECSSSEEEEEEESST
T ss_pred cCCEEEEEecCCEEEEEeCCCc
Confidence 3667777888889999998765
No 156
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=90.89 E-value=8 Score=34.08 Aligned_cols=100 Identities=19% Similarity=0.272 Sum_probs=52.2
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
+++.++.|+.+ ..+.+||..++.-...-..+.. ... ...+.+ +|.+.+.|+.++.|..||.
T Consensus 237 ~~~~l~s~s~d-----------~~v~iwd~~~~~~~~~~~~~~~-~~~-----v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 237 NGNAFATGSDD-----------ATCRLFDLRADQELMTYSHDNI-ICG-----ITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTTEEEEEECCTTC-CSC-----EEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCEEEEEcCC-----------CcEEEEECCCCcEEEEEccCCc-ccc-----eEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 55666776642 2588888876542211111110 111 222333 6788888988899999998
Q ss_pred CCCceeecccCCCCcccceeE-EeeCCeEEEEEeecCCCCCceeEE
Q 016239 243 KKHVWSEVQTLRPPGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLW 287 (392)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~ 287 (392)
.+.+-.. .+.........+ ...++++++.|+.++ .+.+|
T Consensus 300 ~~~~~~~--~~~~h~~~v~~~~~s~dg~~l~s~s~D~----~i~iW 339 (340)
T 1got_B 300 LKADRAG--VLAGHDNRVSCLGVTDDGMAVATGSWDS----FLKIW 339 (340)
T ss_dssp TTCCEEE--EEECCSSCEEEEEECTTSSCEEEEETTS----CEEEE
T ss_pred ccCcEee--EeecCCCcEEEEEEcCCCCEEEEEcCCc----cEEec
Confidence 7654221 111111111122 233677777776443 57777
No 157
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.87 E-value=13 Score=36.42 Aligned_cols=198 Identities=9% Similarity=-0.089 Sum_probs=103.2
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC----cceEecCCcCceeecCCCCcCccCceEEEEEcCC
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP----RFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHD 151 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg----~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 151 (392)
.++...|+....-....++.......+++.. ++.||+..- .+++++. ....+.+..... ..-.++++- .
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~-g~~~~~v~~~g~-~~P~GlAvD--~- 89 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMN-GSALEHVVEFGL-DYPEGMAVD--W- 89 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSC-SCCCEEEEE--T-
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECC-CCCcEEEEeCCC-CCcceEEEE--e-
Confidence 4567777765443332233222333344443 789998742 3566665 333333222111 111223221 1
Q ss_pred CCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecC--CCCCCCCCCCCCccceeeEEE--CCEE
Q 016239 152 RGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELC--PPLPADFRSGYSSQYLSSALF--RGRF 227 (392)
Q Consensus 152 ~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~~~~~~~~~~~~~~~~--~g~l 227 (392)
.+++||+.-.. ...+++++.....=+.+ ..+..| ...++. +|.|
T Consensus 90 ------------~~~~LY~tD~~-----------~~~I~v~~~dG~~~~~l~~~~l~~P---------~~iavdp~~G~l 137 (628)
T 4a0p_A 90 ------------LGKNLYWADTG-----------TNRIEVSKLDGQHRQVLVWKDLDSP---------RALALDPAEGFM 137 (628)
T ss_dssp ------------TTTEEEEEETT-----------TTEEEEEETTSTTCEEEECSSCCCE---------EEEEEETTTTEE
T ss_pred ------------CCCEEEEEECC-----------CCEEEEEecCCCcEEEEEeCCCCCc---------ccEEEccCCCeE
Confidence 16889987432 23688888754432222 122222 344444 6899
Q ss_pred EEEe-ecccEEEEEECCCCceeecccCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccceEecccCCH
Q 016239 228 YVFG-IYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPH 304 (392)
Q Consensus 228 y~~g-g~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~ 304 (392)
|+.. |....|+++++....-+.+... ......++.. +++||+.-.. ...|+++|.+...=+.+...
T Consensus 138 Y~tD~g~~~~I~r~~~dG~~~~~l~~~---~~~P~GlalD~~~~~LY~aD~~------~~~I~~~d~dG~~~~v~~~~-- 206 (628)
T 4a0p_A 138 YWTEWGGKPKIDRAAMDGSERTTLVPN---VGRANGLTIDYAKRRLYWTDLD------TNLIESSNMLGLNREVIADD-- 206 (628)
T ss_dssp EEEECSSSCEEEEEETTSCSCEEEECS---CSSEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEEEC--
T ss_pred EEeCCCCCCEEEEEeCCCCceEEEECC---CCCcceEEEccccCEEEEEECC------CCEEEEEcCCCCceEEeecc--
Confidence 9986 4457899999876554444321 1111223333 6899998632 34566777655322222110
Q ss_pred HHHHhhcCCcccCccceeEEEEeCCEEEEEec
Q 016239 305 DFLYSLVDTEEDDKFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg 336 (392)
. ...+++++.++.||+...
T Consensus 207 -l------------~~P~glav~~~~ly~tD~ 225 (628)
T 4a0p_A 207 -L------------PHPFGLTQYQDYIYWTDW 225 (628)
T ss_dssp -C------------SCEEEEEEETTEEEEEET
T ss_pred -C------------CCceEEEEECCEEEEecC
Confidence 0 135678888999999874
No 158
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.58 E-value=8.1 Score=33.61 Aligned_cols=66 Identities=8% Similarity=-0.103 Sum_probs=36.8
Q ss_pred EEECCEEEEEeecccEEEEEECCC-Cc--eeecccCCCCcccceeEE-ee-CCeEEEEEeecCCCCCceeEEEeecC
Q 016239 221 ALFRGRFYVFGIYSFSVSSFDLKK-HV--WSEVQTLRPPGVMFSFLI-AS-PNMLVLAGMCNAPRGPSFNLWKVDEL 292 (392)
Q Consensus 221 ~~~~g~ly~~gg~~~~i~~yd~~~-~~--W~~i~~~~~~~~~~~~~~-~~-~g~l~v~gg~~~~~~~~~~v~~~d~~ 292 (392)
+.+.+..++.++..+.|..||..+ .. .......... ....+. .. +++++++|+.++ .+.+|.++..
T Consensus 156 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~i~~i~~~~~~~~~l~~~~~dg----~i~i~~~~~~ 226 (342)
T 1yfq_A 156 MDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY--QIRDVALLPKEQEGYACSSIDG----RVAVEFFDDQ 226 (342)
T ss_dssp EEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSS--CEEEEEECSGGGCEEEEEETTS----EEEEEECCTT
T ss_pred EEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCC--ceeEEEECCCCCCEEEEEecCC----cEEEEEEcCC
Confidence 333333366677778999999987 33 2222211111 112222 23 577777776433 6888877665
No 159
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.55 E-value=8.7 Score=33.92 Aligned_cols=91 Identities=11% Similarity=0.010 Sum_probs=48.6
Q ss_pred CCCeecCCCCC-CCCCCCCCccceeeE-EECCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEE
Q 016239 196 SDSWELCPPLP-ADFRSGYSSQYLSSA-LFRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLA 273 (392)
Q Consensus 196 ~~~W~~~~~~~-~~~~~~~~~~~~~~~-~~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~ 273 (392)
-.+|+.+.... .+ .. ....+ .-++.+|+.+. .+.|+.-+=.-++|+.+....... ........+++++++
T Consensus 108 G~tW~~~~~~~~~~-~~-----~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~~-~~~~~~~~~~~~~~~ 179 (327)
T 2xbg_A 108 GQSWSQIPLDPKLP-GS-----PRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQEAIGV-MRNLNRSPSGEYVAV 179 (327)
T ss_dssp TSSCEECCCCTTCS-SC-----EEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECSCCCC-EEEEEECTTSCEEEE
T ss_pred CCCceECccccCCC-CC-----eEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecCCCcc-eEEEEEcCCCcEEEE
Confidence 46899886421 11 11 12233 34678888765 344554433456899986544322 222222336777776
Q ss_pred EeecCCCCCceeEEEe-ecCccceEeccc
Q 016239 274 GMCNAPRGPSFNLWKV-DELSMEFSEIAI 301 (392)
Q Consensus 274 gg~~~~~~~~~~v~~~-d~~~~~W~~~~~ 301 (392)
+. ...+|+- |....+|+.+..
T Consensus 180 g~-------~G~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 180 SS-------RGSFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp ET-------TSSEEEEECTTCSSCEEEEC
T ss_pred EC-------CCcEEEEeCCCCCceeECCC
Confidence 62 1234544 333678998854
No 160
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.53 E-value=4.9 Score=40.28 Aligned_cols=63 Identities=5% Similarity=0.167 Sum_probs=36.5
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
++.+++.|+..+.|..||..+.+-...-.... ..........++.+++.|+.++ .+.+| |..+
T Consensus 197 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg----~v~vw--d~~~ 259 (814)
T 3mkq_A 197 DKPYMITASDDLTIKIWDYQTKSCVATLEGHM-SNVSFAVFHPTLPIIISGSEDG----TLKIW--NSST 259 (814)
T ss_dssp TCCEEEEECTTSEEEEEETTTTEEEEEEECCS-SCEEEEEECSSSSEEEEEETTS----CEEEE--ETTT
T ss_pred CCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC-CCEEEEEEcCCCCEEEEEeCCC----eEEEE--ECCC
Confidence 67788888888999999998765322211111 1111122233677777776433 57777 5544
No 161
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=90.37 E-value=8.9 Score=33.76 Aligned_cols=111 Identities=16% Similarity=0.209 Sum_probs=60.8
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCee--cCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWE--LCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSF 240 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~--~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~y 240 (392)
++.+++.|+.+ ..+.+||..++.-. .+.. .. .. ....+.+ +|...+.|+ .+.|..|
T Consensus 181 dg~~lasg~~d-----------g~i~iwd~~~~~~~~~~~~~-~h--~~-----~v~~l~fs~~g~~l~s~~-~~~v~iw 240 (343)
T 3lrv_A 181 DSLLLALYSPD-----------GILDVYNLSSPDQASSRFPV-DE--EA-----KIKEVKFADNGYWMVVEC-DQTVVCF 240 (343)
T ss_dssp TSCEEEEECTT-----------SCEEEEESSCTTSCCEECCC-CT--TS-----CEEEEEECTTSSEEEEEE-SSBEEEE
T ss_pred CCCEEEEEcCC-----------CEEEEEECCCCCCCccEEec-cC--CC-----CEEEEEEeCCCCEEEEEe-CCeEEEE
Confidence 66777777652 26889998776532 1211 01 11 1223333 566666666 5599999
Q ss_pred ECCCCcee-ecccCCC--Cccc-ceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 241 DLKKHVWS-EVQTLRP--PGVM-FSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 241 d~~~~~W~-~i~~~~~--~~~~-~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
|+.+.+-. .+..... .... .......++++++.++.+.. .+.+|.++.....|..
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~---~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 241 DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN---SLTIYKFDKKTKNWTK 299 (343)
T ss_dssp ETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT---EEEEEEECTTTCSEEE
T ss_pred EcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC---cEEEEEEcccccceEe
Confidence 99876421 1221110 0111 11222336777777643121 7899999888888987
No 162
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.26 E-value=2.2 Score=42.27 Aligned_cols=125 Identities=11% Similarity=0.041 Sum_probs=68.7
Q ss_pred eeeEEECCEEEEEeecccEEEEEECCCC--ceeecccCCCC-------cccceeEEeeCCeEEEEEeecCCCCCceeEEE
Q 016239 218 LSSALFRGRFYVFGIYSFSVSSFDLKKH--VWSEVQTLRPP-------GVMFSFLIASPNMLVLAGMCNAPRGPSFNLWK 288 (392)
Q Consensus 218 ~~~~~~~g~ly~~gg~~~~i~~yd~~~~--~W~~i~~~~~~-------~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~ 288 (392)
.+.++.+++||+... .+.|+++|..+. .|+.-...... .......++.+++||+... ...++.
T Consensus 60 ~~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~a 131 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS-WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIA 131 (668)
T ss_dssp CCCEEETTEEEEEEG-GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEE
T ss_pred cCCEEECCEEEEECC-CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEE
Confidence 456678999999765 468999998665 68764322210 1112234556888887542 245777
Q ss_pred eecCcc--ceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeec
Q 016239 289 VDELSM--EFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 289 ~d~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
+|..+. .|+.-..-+... + ....+-++.++++|+-.+.......-.++-+|.++++ ..|+.-
T Consensus 132 lD~~tG~~~W~~~~~~~~~~----~-------~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~--~~W~~~ 195 (668)
T 1kv9_A 132 LDAKTGKAIWSQQTTDPAKP----Y-------SITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGK--LAWRFY 195 (668)
T ss_dssp EETTTCCEEEEEECSCTTSS----C-------BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC--EEEEEE
T ss_pred EECCCCCEeeeeccCCCCCc----c-------eecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCc--EEEEec
Confidence 787654 487543211110 0 1122334578888875432111111233445888776 568763
No 163
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.23 E-value=9.3 Score=38.19 Aligned_cols=127 Identities=12% Similarity=0.018 Sum_probs=68.2
Q ss_pred cceEEe--e--cCcceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccc
Q 016239 109 NGFFFT--T--TPRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIE 184 (392)
Q Consensus 109 ~g~i~v--~--gg~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~ 184 (392)
+|.|++ . +|..+||+. +++++....-.........+.+.+. ++.|++....
T Consensus 482 ~g~lWi~~~t~~Gl~~~d~~-~~~~~~~~~~~~~~~~~~~~i~~d~--------------~g~lWigt~~---------- 536 (758)
T 3ott_A 482 EGNVWVLLYNNKGIDKINPR-TREVTKLFADELTGEKSPNYLLCDE--------------DGLLWVGFHG---------- 536 (758)
T ss_dssp TSCEEEEETTCSSEEEEETT-TTEEEEECTTTSCGGGCEEEEEECT--------------TSCEEEEETT----------
T ss_pred CCCEEEEccCCCCcEEEeCC-CCceEEecCCCcCCCcccceEEECC--------------CCCEEEEecC----------
Confidence 577887 2 367899998 6877765321111111122233232 6788864321
Q ss_pred cceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCCceeecccCCCCccccee
Q 016239 185 DRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSF 262 (392)
Q Consensus 185 ~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~ 262 (392)
.+.+||+.+++++... .++.. ...+.+.-+|.|++.+. +-|.+||+.+.+...... +..... .+
T Consensus 537 ---Gl~~~~~~~~~~~~~~~~gl~~~-------~i~~i~~~~g~lWi~t~--~Gl~~~~~~~~~~~~~~~-~~~~~~-~~ 602 (758)
T 3ott_A 537 ---GVMRINPKDESQQSISFGSFSNN-------EILSMTCVKNSIWVSTT--NGLWIIDRKTMDARQQNM-TNKRFT-SL 602 (758)
T ss_dssp ---EEEEECC--CCCCBCCCCC---C-------CEEEEEEETTEEEEEES--SCEEEEETTTCCEEEC---CCCCCS-EE
T ss_pred ---ceEEEecCCCceEEecccCCCcc-------ceEEEEECCCCEEEECC--CCeEEEcCCCceeEEecC-CCCcee-ee
Confidence 4788999888877653 22221 11334445788777553 459999999988766432 221111 22
Q ss_pred EEe-eCCeEEEEE
Q 016239 263 LIA-SPNMLVLAG 274 (392)
Q Consensus 263 ~~~-~~g~l~v~g 274 (392)
+.. .+|+||+.|
T Consensus 603 ~~~~~~G~l~fG~ 615 (758)
T 3ott_A 603 LFDPKEDCVYLGG 615 (758)
T ss_dssp EEETTTTEEEEEC
T ss_pred EEECCCCcEEEec
Confidence 222 378888755
No 164
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=90.17 E-value=10 Score=36.87 Aligned_cols=111 Identities=11% Similarity=0.116 Sum_probs=64.6
Q ss_pred EEeecceEEeecC----cceEec-CCcC--ceeecCCCCcC-----c---cCceEEE--EEcCCCCcccccCCcccCCCe
Q 016239 105 FIGANGFFFTTTP----RFGFSR-ILNT--SWHLTSPLRFS-----R---INPLVGV--FYDHDRGHCDLASGFACNLPK 167 (392)
Q Consensus 105 ~~~~~g~i~v~gg----~~~ynp-~~~~--~W~~~~~~~~~-----r---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 167 (392)
.++.++.||+.+. ++.+|. . ++ .|+.-...... + ...+.++ . +++
T Consensus 58 P~v~~g~vyv~~~~~~~v~AlD~~~-tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~-----------------~g~ 119 (599)
T 1w6s_A 58 PLVVDGKMYIHTSFPNNTFALGLDD-PGTILWQDKPKQNPAARAVACCDLVNRGLAYWPG-----------------DGK 119 (599)
T ss_dssp CEEETTEEEEECSTTTCEEEEETTC-TTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECC-----------------CSS
T ss_pred cEEECCEEEEEeCCCCEEEEEeCCC-CCcEEEEECCCCCccccccccccccccceEEEec-----------------CCc
Confidence 3556899999865 478898 6 44 78765433211 1 1122333 3 555
Q ss_pred ----EEEEeceeecCcccccccceEEEEEeCCCCC--eecCCCCC-CCCCCCCCccceeeEEECCEEEEEee-----ccc
Q 016239 168 ----FIVVGGVRFIGGLVDIEDRLAVEIYDPHSDS--WELCPPLP-ADFRSGYSSQYLSSALFRGRFYVFGI-----YSF 235 (392)
Q Consensus 168 ----iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~-~~~~~~~~~~~~~~~~~~g~ly~~gg-----~~~ 235 (392)
||+.... ..+..+|..+++ |+.-..-+ ..... ..+.++.++++|+-.+ ..+
T Consensus 120 ~~~rV~v~t~d------------g~l~AlDa~TG~~~W~~~~~~~~~~~~~-----~ssP~v~~g~V~vg~~g~e~g~~g 182 (599)
T 1w6s_A 120 TPALILKTQLD------------GNVAALNAETGETVWKVENSDIKVGSTL-----TIAPYVVKDKVIIGSSGAELGVRG 182 (599)
T ss_dssp SCCEEEEECTT------------SEEEEEETTTCCEEEEEECCCGGGTCBC-----CSCCEEETTEEEECCBCGGGTCCC
T ss_pred ceeEEEEEcCC------------CEEEEEECCCCCEEEeecCCCCCcccee-----ecCCEEECCEEEEEecccccCCCC
Confidence 7776432 157888887765 87532211 01011 1355667999887543 357
Q ss_pred EEEEEECCCC--ceeec
Q 016239 236 SVSSFDLKKH--VWSEV 250 (392)
Q Consensus 236 ~i~~yd~~~~--~W~~i 250 (392)
.|.+||.++. .|+.-
T Consensus 183 ~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 183 YLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCcEEEEEc
Confidence 8999999876 47654
No 165
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.07 E-value=9.5 Score=33.63 Aligned_cols=130 Identities=9% Similarity=-0.083 Sum_probs=70.2
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEE--CCEEEEEe-ecccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALF--RGRFYVFG-IYSFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~--~g~ly~~g-g~~~~i~~ 239 (392)
++.||+.-.. ...++++++....-+.+. .+..+ ...++. +|.||+.. +....|++
T Consensus 90 ~g~ly~~d~~-----------~~~I~~~~~dG~~~~~l~~~~~~~P---------~giavdp~~g~ly~td~~~~~~I~r 149 (318)
T 3sov_A 90 GEKLYWTDSE-----------TNRIEVSNLDGSLRKVLFWQELDQP---------RAIALDPSSGFMYWTDWGEVPKIER 149 (318)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTSCSCEEEECSSCSSE---------EEEEEEGGGTEEEEEECSSSCEEEE
T ss_pred CCeEEEEECC-----------CCEEEEEECCCCcEEEEEeCCCCCc---------cEEEEeCCCCEEEEEecCCCCEEEE
Confidence 6788887422 226888887654323221 12111 333333 58999986 44578999
Q ss_pred EECCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccC
Q 016239 240 FDLKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDD 317 (392)
Q Consensus 240 yd~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~ 317 (392)
+|+....-+.+..... .....++. .+++||+.... ...|+++|.+...-+.+..-. .
T Consensus 150 ~~~dG~~~~~~~~~~l--~~Pnglavd~~~~~lY~aD~~------~~~I~~~d~dG~~~~~~~~~~--~----------- 208 (318)
T 3sov_A 150 AGMDGSSRFIIINSEI--YWPNGLTLDYEEQKLYWADAK------LNFIHKSNLDGTNRQAVVKGS--L----------- 208 (318)
T ss_dssp EETTSCSCEEEECSSC--SCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSC--C-----------
T ss_pred EEcCCCCeEEEEECCC--CCccEEEEeccCCEEEEEECC------CCEEEEEcCCCCceEEEecCC--C-----------
Confidence 9986433222211111 11122333 37899998632 346777776653323322100 0
Q ss_pred ccceeEEEEeCCEEEEEec
Q 016239 318 KFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 318 ~~~~~~~~~~~~~i~v~gg 336 (392)
....++++.++.+|+..-
T Consensus 209 -~~P~glav~~~~lywtd~ 226 (318)
T 3sov_A 209 -PHPFALTLFEDILYWTDW 226 (318)
T ss_dssp -SCEEEEEEETTEEEEEET
T ss_pred -CCceEEEEeCCEEEEEec
Confidence 135677778999999853
No 166
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.06 E-value=10 Score=34.02 Aligned_cols=109 Identities=19% Similarity=0.140 Sum_probs=54.1
Q ss_pred CeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CC-EEEEEeeccc---EEEE
Q 016239 166 PKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RG-RFYVFGIYSF---SVSS 239 (392)
Q Consensus 166 ~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g-~ly~~gg~~~---~i~~ 239 (392)
+.+++.|+.+ ..+.+||..+++-...-..+.. ..++... ...+.+ ++ .+++.++..+ .|..
T Consensus 178 ~~~l~~~~~d-----------g~v~iwd~~~~~~~~~~~~~~~-~~~~~~~-v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 178 AHVFASAGSS-----------NFASIWDLKAKKEVIHLSYTSP-NSGIKQQ-LSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp TTEEEEESSS-----------SCEEEEETTTTEEEEEECCCCC-SSCCCCC-EEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CcEEEEEcCC-----------CCEEEEECCCCCcceEEecccc-ccccCCc-eEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 5677777652 2588888877654322222110 0000000 222333 23 5777777766 8999
Q ss_pred EECCCCceeecccCC-CCcccceeEEe-e-CCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 240 FDLKKHVWSEVQTLR-PPGVMFSFLIA-S-PNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 240 yd~~~~~W~~i~~~~-~~~~~~~~~~~-~-~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
||..+..- .+.... ........+.. . ++++++.++.+. .+.+| |..+.
T Consensus 245 ~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg----~v~~w--d~~~~ 295 (416)
T 2pm9_A 245 WDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN----TVLLW--NPESA 295 (416)
T ss_dssp EETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS----EEEEE--CSSSC
T ss_pred EeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC----CEEEe--eCCCC
Confidence 99987531 111121 11111122222 2 677777776543 57777 65544
No 167
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=89.97 E-value=11 Score=34.27 Aligned_cols=62 Identities=15% Similarity=0.226 Sum_probs=35.4
Q ss_pred CEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
|.+.+.|+.++.|..||..+.+-...-.... ..........++++++.|+.++ .+.+| |..+
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~-~~v~~v~~~~~g~~l~s~s~D~----~i~vw--d~~~ 369 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD-NWVRGVLFHSGGKFILSCADDK----TLRVW--DYKN 369 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEECSSSSCEEEEETTT----EEEEE--CCTT
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEEECCC-CcEEEEEEcCCCCEEEEEeCCC----eEEEE--ECCC
Confidence 6677888888999999998764221111111 1111222233677777776443 68888 5543
No 168
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=89.92 E-value=11 Score=34.06 Aligned_cols=68 Identities=22% Similarity=0.289 Sum_probs=35.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeec-CCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWEL-CPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFD 241 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd 241 (392)
++++++.|+.+ ..+.+||..++.-.. +...... ..++... ...+.+ +|.+.+.|+.++.|..||
T Consensus 218 ~~~~l~~~s~d-----------~~v~iwd~~~~~~~~~~~~~~~~-~~~h~~~-v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 218 DGKYIAAGSLD-----------RAVRVWDSETGFLVERLDSENES-GTGHKDS-VYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp TCCEEEEEETT-----------SCEEEEETTTCCEEEEEC-------CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCEEEEEcCC-----------CcEEEEECCCCcEEEeecccccC-CCCCCCC-EEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 56677777652 258888887764321 1110000 0110001 222333 577788888889999999
Q ss_pred CCCC
Q 016239 242 LKKH 245 (392)
Q Consensus 242 ~~~~ 245 (392)
+.+.
T Consensus 285 ~~~~ 288 (393)
T 1erj_A 285 LQNA 288 (393)
T ss_dssp C---
T ss_pred CCCC
Confidence 8754
No 169
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.90 E-value=6.5 Score=35.00 Aligned_cols=67 Identities=13% Similarity=0.082 Sum_probs=36.7
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEee-CCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS-PNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~-~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
++...+.++.++.|..+|+.+.+-...-...........+... ++.+++.|+.++ .+.+| |..+.+.
T Consensus 165 ~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg----~v~~w--d~~~~~~ 232 (354)
T 2pbi_B 165 SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK----KAMVW--DMRSGQC 232 (354)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS----CEEEE--ETTTCCE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC----eEEEE--ECCCCcE
Confidence 4556667777889999999887543221111111111111111 456777776543 67888 6665543
No 170
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.62 E-value=12 Score=33.99 Aligned_cols=203 Identities=11% Similarity=0.102 Sum_probs=100.6
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCC--CceeeCCCCCCCCCcceEEee---cceEEeec-------CcceEecCCcCce
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPAS--NSWFHLPPAQEPRAGSCFIGA---NGFFFTTT-------PRFGFSRILNTSW 129 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~r~~~~~~~~---~g~i~v~g-------g~~~ynp~~~~~W 129 (392)
...|++... .-++.++... .+|....+......-++++.. .+.||+.+ ++++.+.. ..+|
T Consensus 22 ~g~l~vgt~-------~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~-G~tW 93 (394)
T 3b7f_A 22 PVMLLVATI-------KGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDG-GGNW 93 (394)
T ss_dssp CCEEEEEET-------TEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESST-TSCC
T ss_pred CCEEEEEec-------CceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCC-CCCc
Confidence 456666432 2366677654 689875321111112234433 56788774 45666665 6799
Q ss_pred eecCCC---CcC--c----cCceE-EEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCe
Q 016239 130 HLTSPL---RFS--R----INPLV-GVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSW 199 (392)
Q Consensus 130 ~~~~~~---~~~--r----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W 199 (392)
+.+... +.. + ....+ .+..+... ..+.+|+.+.. ..+++.+-...+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-----------~~~~l~~g~~~------------ggl~~S~DgG~tW 150 (394)
T 3b7f_A 94 TEATRPPAFNKAPEGETGRVVDHVFWLTPGHAS-----------EPGTWYAGTSP------------QGLFRSTDHGASW 150 (394)
T ss_dssp EECSBCCCCCCCC----CCCCCEEEEEEECCTT-----------STTCEEEEEET------------TEEEEESSTTSBC
T ss_pred eECCccccCCCcccccccccccceeEEEeCCCC-----------CCCEEEEEecC------------CcEEEEcCCCCCe
Confidence 987532 111 0 00111 12211100 03567765421 1466776667789
Q ss_pred ecCCCC---CCCC------C-CCCCccceeeEEEC----CEEEEEeecccEEEEEECCCCceeecccCCCC---------
Q 016239 200 ELCPPL---PADF------R-SGYSSQYLSSALFR----GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPP--------- 256 (392)
Q Consensus 200 ~~~~~~---~~~~------~-~~~~~~~~~~~~~~----g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~--------- 256 (392)
+.+... |... . ..........+.++ +.||+.... +.|+..+-..++|+.+......
T Consensus 151 ~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~ 229 (394)
T 3b7f_A 151 EPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVE 229 (394)
T ss_dssp EECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSS
T ss_pred EECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-CCEEEECCCCCCceECCCCccccccCCCccc
Confidence 887532 1100 0 00000011233332 567775433 4578777777899987532110
Q ss_pred -cccceeEEee-C--CeEEEEEeecCCCCCceeEEEeecCccceEeccc-CCH
Q 016239 257 -GVMFSFLIAS-P--NMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI-MPH 304 (392)
Q Consensus 257 -~~~~~~~~~~-~--g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~-~p~ 304 (392)
......++.. + +.||+.. ...||+.+....+|+.+.. +|.
T Consensus 230 ~g~~~~~i~~~~~~~~~l~vg~--------~~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 230 FGHDPHCVVQHPAAPDILYQQN--------HCGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp SCBCEEEEEECSSSTTEEEEEE--------TTEEEEEETTTTEEECGGGGSCT
T ss_pred cCcceeEEEECCCCCCEEEEEc--------CCeEEEeCCCCCcceECCCCCCC
Confidence 1112333333 2 5666643 2247888888899998864 443
No 171
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.59 E-value=6.2 Score=39.24 Aligned_cols=65 Identities=14% Similarity=0.091 Sum_probs=39.5
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
++.||+.-...+.|.+||+....-+.+............+++.++.||+.... ...|.++|+.+.
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~------~~~V~~~d~~~G 615 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII------NEAIFSANRLTG 615 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECST------TTCEEEEETTTE
T ss_pred CCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCC------CCeEEEEEccCC
Confidence 57899998777899999996543333322111111122345667889887632 345667786544
No 172
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=89.53 E-value=2.2 Score=42.34 Aligned_cols=125 Identities=10% Similarity=0.079 Sum_probs=69.2
Q ss_pred eeeEEECCEEEEEeecccEEEEEECCCC--ceeecccCCC-------CcccceeEEeeCCeEEEEEeecCCCCCceeEEE
Q 016239 218 LSSALFRGRFYVFGIYSFSVSSFDLKKH--VWSEVQTLRP-------PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWK 288 (392)
Q Consensus 218 ~~~~~~~g~ly~~gg~~~~i~~yd~~~~--~W~~i~~~~~-------~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~ 288 (392)
.+.++.+|.||+.+. .+.|+++|..+. .|+.-..... .......++..+++||+... ...++.
T Consensus 71 ~~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~a 142 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIA 142 (677)
T ss_dssp CCCEEETTEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEE
T ss_pred eCCEEECCEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEE
Confidence 355678999999876 468999998766 5776433221 01122334567888887642 235777
Q ss_pred eecCcc--ceEeccc-CCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeec
Q 016239 289 VDELSM--EFSEIAI-MPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 289 ~d~~~~--~W~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
+|..+. .|+.-.. -+... . ....+-++.++++|+..+..+....-.++-+|.++++ ..|+.-
T Consensus 143 lD~~tG~~~W~~~~~~~~~~~----~-------~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~--~~W~~~ 207 (677)
T 1kb0_A 143 LDAATGKEVWHQNTFEGQKGS----L-------TITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGE--RKWRWF 207 (677)
T ss_dssp EETTTCCEEEEEETTTTCCSS----C-------BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC--EEEEEE
T ss_pred EECCCCCEEeeecCCcCcCcC----c-------ccccCcEEECCEEEEEecccccCCCCEEEEEECCCCc--EEEEec
Confidence 787654 4875322 10000 0 0122334578888886542211111223444888776 567664
No 173
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=89.51 E-value=6.9 Score=31.87 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=43.3
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-----cccCCC-CcccceeEEeeCC-eEEEEEeecCCCCCceeEEEeecCccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-----VQTLRP-PGVMFSFLIASPN-MLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-----i~~~~~-~~~~~~~~~~~~g-~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
++++|+|-|. ..++||..+++-.. +...+. +....+++...++ ++|++-| ...|+||..+++
T Consensus 109 ~g~~yfFkG~--~yw~yd~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg--------~~y~r~d~~~~~- 177 (196)
T 3c7x_A 109 NGKTYFFRGN--KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKG--------NKYWKFNNQKLK- 177 (196)
T ss_dssp TTEEEEEETT--EEEEEETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEET--------TEEEEEETTTTE-
T ss_pred CCEEEEEECC--EEEEEeCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEEC--------CEEEEEECCcce-
Confidence 6899999774 67999987754221 111111 1122333333244 8999864 367899987653
Q ss_pred EecccCCHHHHHhhc
Q 016239 297 SEIAIMPHDFLYSLV 311 (392)
Q Consensus 297 ~~~~~~p~~~~~~~~ 311 (392)
.....|..+...|.
T Consensus 178 -v~~~yp~~i~~~w~ 191 (196)
T 3c7x_A 178 -VEPGYPKSALRDWM 191 (196)
T ss_dssp -ECTTCCEEHHHHTS
T ss_pred -eccCCccchhhhcC
Confidence 33455655443343
No 174
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=89.36 E-value=5.3 Score=36.16 Aligned_cols=90 Identities=18% Similarity=0.282 Sum_probs=48.6
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeec-ccCCC--Ccc--cc
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEV-QTLRP--PGV--MF 260 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i-~~~~~--~~~--~~ 260 (392)
++.+||..++.....-..... ....+.. ++.+++.|+.++.|..||..+.+-... ..... ... ..
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 188 TVRIWDLRTGQCSLTLSIEDG--------VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 259 (393)
T ss_dssp EEEEEETTTTEEEEEEECSSC--------EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE
T ss_pred cEEEEECCCCeeEEEEEcCCC--------cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCE
Confidence 688889877654322111111 0222222 678888899889999999987653322 11110 111 11
Q ss_pred eeE-EeeCCeEEEEEeecCCCCCceeEEEe
Q 016239 261 SFL-IASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 261 ~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
..+ ...++++++.|+.++ .+.+|.+
T Consensus 260 ~~v~~~~~g~~l~s~s~d~----~v~~wd~ 285 (393)
T 1erj_A 260 YSVVFTRDGQSVVSGSLDR----SVKLWNL 285 (393)
T ss_dssp EEEEECTTSSEEEEEETTS----EEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCC----EEEEEEC
Confidence 112 223677777776443 6888844
No 175
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.35 E-value=12 Score=33.73 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=30.0
Q ss_pred EEEEEeCCCCCeecCC-CCCCCCCCCCCccceeeEEECCEEEEEe---ecccEEEEEECCCCc
Q 016239 188 AVEIYDPHSDSWELCP-PLPADFRSGYSSQYLSSALFRGRFYVFG---IYSFSVSSFDLKKHV 246 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~~~g~ly~~g---g~~~~i~~yd~~~~~ 246 (392)
.+.+||..+++-...- ......... .....-++.+++.| +..+.|..||..+..
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEGTRPV-----HAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCSSSCC-----EEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred cEEEEeCCCCceeeeeccCCCCCcce-----EEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 6889998776532211 111110111 11222367777777 567899999997754
No 176
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=89.26 E-value=12 Score=33.52 Aligned_cols=61 Identities=15% Similarity=0.169 Sum_probs=38.6
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-cccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-VQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
+|++.+.|+.++.|..||..+.+-.. +..... ..-......-+|++++.|..+. ++.||.+
T Consensus 280 dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~-~~V~~v~fSpdg~~laS~S~D~----tvrvw~i 341 (365)
T 4h5i_A 280 KGELAVLASNDNSIALVKLKDLSMSKIFKQAHS-FAITEVTISPDSTYVASVSAAN----TIHIIKL 341 (365)
T ss_dssp TSCEEEEEETTSCEEEEETTTTEEEEEETTSSS-SCEEEEEECTTSCEEEEEETTS----EEEEEEC
T ss_pred CCCceEEEcCCCEEEEEECCCCcEEEEecCccc-CCEEEEEECCCCCEEEEEeCCC----eEEEEEc
Confidence 78888899999999999998765321 111111 1111222334888888876554 7999955
No 177
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.19 E-value=4.1 Score=35.66 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=40.4
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECC-EEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRG-RFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g-~ly~~gg~~~~i~~yd~ 242 (392)
++++|+.++. ...+.++|..+++....-..+..... ...+. -+| .+|+.+...+.|..||+
T Consensus 10 ~~~~~v~~~~-----------~~~v~~~d~~~~~~~~~~~~~~~~~~------~~~~~s~dg~~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 10 GHEYMIVTNY-----------PNNLHVVDVASDTVYKSCVMPDKFGP------GTAMMAPDNRTAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp TCEEEEEEET-----------TTEEEEEETTTTEEEEEEECSSCCSS------CEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCEEEEEeCC-----------CCeEEEEECCCCcEEEEEecCCCCCC------ceeEECCCCCEEEEEeCCCCcEEEEeC
Confidence 6778887654 22688999888764322122220011 22232 245 57888776789999999
Q ss_pred CCCcee
Q 016239 243 KKHVWS 248 (392)
Q Consensus 243 ~~~~W~ 248 (392)
.+.+-.
T Consensus 73 ~t~~~~ 78 (349)
T 1jmx_B 73 DTCKNT 78 (349)
T ss_dssp TTTEEE
T ss_pred CCCcEE
Confidence 887654
No 178
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=88.97 E-value=2.7 Score=41.76 Aligned_cols=126 Identities=13% Similarity=0.051 Sum_probs=68.6
Q ss_pred eeeEEECCEEEEEeecccEEEEEECCCC--ceeecccCCC-------CcccceeEEeeCCeEEEEEeecCCCCCceeEEE
Q 016239 218 LSSALFRGRFYVFGIYSFSVSSFDLKKH--VWSEVQTLRP-------PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWK 288 (392)
Q Consensus 218 ~~~~~~~g~ly~~gg~~~~i~~yd~~~~--~W~~i~~~~~-------~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~ 288 (392)
.+.++.+++||+.+. .+.|+++|..++ .|+.-..... +.......++.+++||+... ...++.
T Consensus 64 ~~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~A 135 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEA 135 (689)
T ss_dssp CCCEEETTEEEEECG-GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEE
T ss_pred ecCEEECCEEEEEcC-CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEE
Confidence 455678999999765 457999998765 6876432221 01112234566888887542 235667
Q ss_pred eecCcc--ceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeec
Q 016239 289 VDELSM--EFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 289 ~d~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
+|..+. .|+.-....... .+ ....+.++.++++|+-.+.......-.++-+|.+|++ ..|+.-
T Consensus 136 lDa~TG~~~W~~~~~~~~~~---~~-------~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~--~~W~~~ 200 (689)
T 1yiq_A 136 IDAKTGQRAWSVDTRADHKR---SY-------TITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGK--EAWRFY 200 (689)
T ss_dssp EETTTCCEEEEEECCSCTTS---CC-------BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC--EEEEEE
T ss_pred EECCCCCEeeeecCcCCCCC---Cc-------cccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCc--EEEEec
Confidence 787654 487543211110 00 1122345678998885432111112233444888877 568753
No 179
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.97 E-value=5 Score=38.82 Aligned_cols=111 Identities=10% Similarity=0.085 Sum_probs=66.6
Q ss_pred EEeecceEEeecC----cceEec-CCcC--ceeecCCCCcC--------ccCceEEEEEcCCCCcccccCCcccCCCeEE
Q 016239 105 FIGANGFFFTTTP----RFGFSR-ILNT--SWHLTSPLRFS--------RINPLVGVFYDHDRGHCDLASGFACNLPKFI 169 (392)
Q Consensus 105 ~~~~~g~i~v~gg----~~~ynp-~~~~--~W~~~~~~~~~--------r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 169 (392)
.++.++.||+... ++.+|. . ++ .|+.-...... ....+.++. ++++|
T Consensus 58 P~v~~g~vyv~~~~~~~v~AlD~~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~ 119 (571)
T 2ad6_A 58 PLVIGDMMYVHSAFPNNTYALNLND-PGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-----------------AGQIV 119 (571)
T ss_dssp CEEETTEEEEECSTTTCEEEEETTC-TTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-----------------TTEEE
T ss_pred cEEECCEEEEEeCCCCEEEEEeCCC-CccEEEEEcCCCCccccccccccccccccEEE-----------------CCEEE
Confidence 3556899999865 478898 6 44 78764333211 011233445 88888
Q ss_pred EEeceeecCcccccccceEEEEEeCCCC--CeecCCCC-CCCCCCCCCccceeeEEECCEEEEEeec-----ccEEEEEE
Q 016239 170 VVGGVRFIGGLVDIEDRLAVEIYDPHSD--SWELCPPL-PADFRSGYSSQYLSSALFRGRFYVFGIY-----SFSVSSFD 241 (392)
Q Consensus 170 v~gG~~~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~-~~~~~~~~~~~~~~~~~~~g~ly~~gg~-----~~~i~~yd 241 (392)
+.... ..+..+|..++ .|+.-..- +..... ..+.++.++++|+-... .+.|.+||
T Consensus 120 v~~~d------------g~l~alD~~tG~~~W~~~~~~~~~~~~~-----~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D 182 (571)
T 2ad6_A 120 KKQAN------------GHLLALDAKTGKINWEVEVCDPKVGSTL-----TQAPFVAKDTVLMGCSGAELGVRGAVNAFD 182 (571)
T ss_dssp EECTT------------SEEEEEETTTCCEEEEEECCCGGGTCBC-----CSCCEEETTEEEEECBCGGGTCCCEEEEEE
T ss_pred EEeCC------------CEEEEEECCCCCEEEEecCCCCCcccee-----ccCCEEECCEEEEEecCCccCCCCEEEEEE
Confidence 87432 15888898776 48753221 111011 13455679999886542 47899999
Q ss_pred CCCC--ceeec
Q 016239 242 LKKH--VWSEV 250 (392)
Q Consensus 242 ~~~~--~W~~i 250 (392)
..+. .|+.-
T Consensus 183 ~~tG~~~W~~~ 193 (571)
T 2ad6_A 183 LKTGELKWRAF 193 (571)
T ss_dssp TTTCCEEEEEE
T ss_pred CCCCcEEEEEc
Confidence 9765 57653
No 180
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=88.94 E-value=1.3 Score=40.10 Aligned_cols=50 Identities=16% Similarity=0.268 Sum_probs=21.9
Q ss_pred EEEEEeCCCCC--eecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCC--ceee
Q 016239 188 AVEIYDPHSDS--WELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKH--VWSE 249 (392)
Q Consensus 188 ~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~--~W~~ 249 (392)
.+..+|..+++ |+.-..- ..+. + -.++.+|+ |+..+.|.++|+.++ .|+.
T Consensus 103 ~v~a~D~~tG~~~w~~~~~~--~~~~-------~--p~~~~v~~-~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 103 IWYVIDLLTGEKQQTLSSAF--ADSL-------S--PSTSLLYL-GRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp EEEEECCC---------------------------------EEE-EEEEEEEECCCSSSSSCCCEE
T ss_pred EEEEEECCCCcEEEEecCCC--cccc-------c--ccCCEEEE-EecCCEEEEEECCCCCEEEeE
Confidence 58888887654 6543221 1011 1 13455554 555678999998766 4764
No 181
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=88.88 E-value=13 Score=33.41 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=50.2
Q ss_pred EEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEE---CCEEEEEeecccEEEEEECCCCceeecccCCCC-cccce
Q 016239 188 AVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALF---RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPP-GVMFS 261 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~---~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~-~~~~~ 261 (392)
++.+||..++.-...- ..+.. ... . ...+.+ ++.+++.|+.++.|..||+.... ..+...... .....
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~-h~~---~-v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSG-HTA---D-VLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGHEGDINS 254 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSS-CCS---C-EEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCCSSCCCE
T ss_pred cEEEEEcCCCcEEEEeecccCCC-Ccc---C-eEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCcCCCeEE
Confidence 5888898876543221 11111 110 0 122222 57888999999999999986321 111111111 11112
Q ss_pred eEEeeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 262 FLIASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 262 ~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
.....+++.++.|+.++ .+.+| |..+..
T Consensus 255 v~~~p~~~~l~s~s~D~----~i~lw--d~~~~~ 282 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDDG----TCRLF--DMRTGH 282 (380)
T ss_dssp EEECTTSSEEEEECSSS----CEEEE--ETTTTE
T ss_pred EEEecCCCeEEEEcCCC----eEEEE--ECCCCc
Confidence 22233777777776543 68888 665543
No 182
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.84 E-value=8.6 Score=33.36 Aligned_cols=63 Identities=11% Similarity=0.203 Sum_probs=33.0
Q ss_pred CCEEEEEeecccEEEEEECCCCc-eeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc-ceE
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV-WSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM-EFS 297 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~-W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~-~W~ 297 (392)
+|.||+. ...+.+.+||...+. |..-.. .. .....++..++.||+... ...++++|++.. .|.
T Consensus 225 ~g~l~v~-t~~~gl~~~~~~g~~~~~~~~~-~~--~~~~~~~~~~g~l~v~t~-------~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 225 DGTIYVT-SLDGHLYAINPDGTEKWRFKTG-KR--IESSPVIGNTDTIYFGSY-------DGHLYAINPDGTEKWN 289 (330)
T ss_dssp TSCEEEE-ETTTEEEEECTTSCEEEEEECS-SC--CCSCCEECTTSCEEEECT-------TCEEEEECTTSCEEEE
T ss_pred CCeEEEE-cCCCeEEEECCCCCEeEEeeCC-CC--ccccceEcCCCeEEEecC-------CCCEEEECCCCcEEEE
Confidence 4577764 445689999875543 443221 11 111222333788887532 235777787433 354
No 183
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.79 E-value=12 Score=33.00 Aligned_cols=171 Identities=16% Similarity=0.172 Sum_probs=84.1
Q ss_pred CCceeeCCCCC-CCCCcceEEe-ecceEEeecCc-ceEecC-CcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcc
Q 016239 87 SNSWFHLPPAQ-EPRAGSCFIG-ANGFFFTTTPR-FGFSRI-LNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFA 162 (392)
Q Consensus 87 ~~~W~~~~~~~-~~r~~~~~~~-~~g~i~v~gg~-~~ynp~-~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 162 (392)
..+|..+.... .+-..+.++. .++.+|+.+.. .+|-.. -..+|+.+...... .-+.+... .
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~-~~~~~~~~--~------------ 172 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIG-VMRNLNRS--P------------ 172 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCC-CEEEEEEC--T------------
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCc-ceEEEEEc--C------------
Confidence 56798875432 2222233443 36777777532 223221 13589887543221 12222222 1
Q ss_pred cCCCeEEEEeceeecCcccccccceEEEEE-eCCCCCeecCCCCCCCCCCCCCccceeeEE-ECCEEEEEeecccEEEEE
Q 016239 163 CNLPKFIVVGGVRFIGGLVDIEDRLAVEIY-DPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIYSFSVSSF 240 (392)
Q Consensus 163 ~~~~~iyv~gG~~~~~~~~~~~~~~~~~~y-d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~i~~y 240 (392)
++.++++|.. + .+..- |....+|+.+.. +.. .. ....+. -++.+|+.+. .+.++..
T Consensus 173 --~~~~~~~g~~--------G----~~~~S~d~gG~tW~~~~~-~~~-~~-----~~~~~~~~~g~~~~~~~-~G~~~~s 230 (327)
T 2xbg_A 173 --SGEYVAVSSR--------G----SFYSTWEPGQTAWEPHNR-TTS-RR-----LHNMGFTPDGRLWMIVN-GGKIAFS 230 (327)
T ss_dssp --TSCEEEEETT--------S----SEEEEECTTCSSCEEEEC-CSS-SC-----EEEEEECTTSCEEEEET-TTEEEEE
T ss_pred --CCcEEEEECC--------C----cEEEEeCCCCCceeECCC-CCC-Cc-----cceeEECCCCCEEEEeC-CceEEEe
Confidence 5567766532 0 12222 333578988743 222 11 133332 2577887654 4556665
Q ss_pred ECC-CCceeecccC-CCCcccceeEEe-eCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 241 DLK-KHVWSEVQTL-RPPGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 241 d~~-~~~W~~i~~~-~~~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
+.. -.+|+.+..+ .+.......++. -++.+|++|.. ..+++-.-...+|+.+..
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA-------GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST-------TCEEEESSTTSSCEECGG
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC-------CeEEEeCCCCcccEEcCc
Confidence 432 5689987654 122222233332 26788888752 234443345678998764
No 184
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=88.76 E-value=13 Score=35.40 Aligned_cols=91 Identities=10% Similarity=0.056 Sum_probs=49.9
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA 265 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~ 265 (392)
.+.+||..++.... ..+... ... ...+.+ ++.+.+.|+..+.|..||..+.+-...-..............
T Consensus 468 ~i~~~~~~~~~~~~-~~~~~~-~~~-----v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~s 540 (615)
T 1pgu_A 468 TIQVFKLSDLEVSF-DLKTPL-RAK-----PSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWK 540 (615)
T ss_dssp CEEEEETTEEEEEE-ECSSCC-SSC-----EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEEC
T ss_pred eEEEEECCCccccc-cccCCc-cCc-----eEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEc
Confidence 57888887665432 111111 111 233334 788888898889999999987654322111011111122223
Q ss_pred e----------CCeEEEEEeecCCCCCceeEEEe
Q 016239 266 S----------PNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 266 ~----------~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
. ++++++.|+.++ .+.+|.+
T Consensus 541 p~~~~~~~~~~~~~~l~~~~~dg----~i~iw~~ 570 (615)
T 1pgu_A 541 PAEKGANEEEIEEDLVATGSLDT----NIFIYSV 570 (615)
T ss_dssp CCC------CCSCCEEEEEETTS----CEEEEES
T ss_pred CccccccccccCCCEEEEEcCCC----cEEEEEC
Confidence 3 678888776543 6788844
No 185
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=88.72 E-value=9.4 Score=34.04 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=45.4
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-----CCEEEEEeecccEEEEEECCCCceeecccCCCCccccee
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-----RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSF 262 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~ 262 (392)
.+.+||..++.-...-..+.. ...+.+ ++.+.+.|+..+.|..||+.+.+-... ..........
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--~~~~~~~v~~ 191 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEET---------VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI--LQGHRQEILA 191 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSC---------EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE--ECCCCSCEEE
T ss_pred eEEEeeCCCCccceeccCCCc---------eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee--ecCCCCcEEE
Confidence 688888877654333222221 111111 345788888888999999987643222 1111111122
Q ss_pred EEee-CCe-EEEEEeecCCCCCceeEEEe
Q 016239 263 LIAS-PNM-LVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 263 ~~~~-~g~-l~v~gg~~~~~~~~~~v~~~ 289 (392)
+... ++. +++.|+.++ .+.+|.+
T Consensus 192 ~~~~~~~~~ll~~~~~dg----~i~i~d~ 216 (408)
T 4a11_B 192 VSWSPRYDYILATASADS----RVKLWDV 216 (408)
T ss_dssp EEECSSCTTEEEEEETTS----CEEEEET
T ss_pred EEECCCCCcEEEEEcCCC----cEEEEEC
Confidence 2222 444 677775443 5777743
No 186
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.40 E-value=4.3 Score=39.57 Aligned_cols=126 Identities=7% Similarity=0.078 Sum_probs=67.6
Q ss_pred eeeEEECCEEEEEeecccEEEEEEC-CCC--ceeecccCCC-------CcccceeEEe--eCCe----EEEEEeecCCCC
Q 016239 218 LSSALFRGRFYVFGIYSFSVSSFDL-KKH--VWSEVQTLRP-------PGVMFSFLIA--SPNM----LVLAGMCNAPRG 281 (392)
Q Consensus 218 ~~~~~~~g~ly~~gg~~~~i~~yd~-~~~--~W~~i~~~~~-------~~~~~~~~~~--~~g~----l~v~gg~~~~~~ 281 (392)
.+.++.++.||+.+...+.|+++|. .+. .|+.-..... +......+++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~------ 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL------ 129 (599)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT------
T ss_pred eccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC------
Confidence 4567789999998764578999998 665 6876433221 0011122344 5676 877532
Q ss_pred CceeEEEeecCcc--ceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCcccee
Q 016239 282 PSFNLWKVDELSM--EFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCS 359 (392)
Q Consensus 282 ~~~~v~~~d~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~ 359 (392)
...++.+|..+. .|+.-..-+... +. ...+-++.+++||+-.+.......-.++-+|.++++ ..
T Consensus 130 -dg~l~AlDa~TG~~~W~~~~~~~~~~----~~-------~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~--~~ 195 (599)
T 1w6s_A 130 -DGNVAALNAETGETVWKVENSDIKVG----ST-------LTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGE--QV 195 (599)
T ss_dssp -TSEEEEEETTTCCEEEEEECCCGGGT----CB-------CCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCC--EE
T ss_pred -CCEEEEEECCCCCEEEeecCCCCCcc----ce-------eecCCEEECCEEEEEecccccCCCCeEEEEECCCCc--EE
Confidence 245777787554 387532211110 00 112334568888875421111111233444888776 56
Q ss_pred eeec
Q 016239 360 WRRL 363 (392)
Q Consensus 360 W~~~ 363 (392)
|+.-
T Consensus 196 W~~~ 199 (599)
T 1w6s_A 196 WRAY 199 (599)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8764
No 187
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.33 E-value=12 Score=32.68 Aligned_cols=107 Identities=9% Similarity=-0.088 Sum_probs=59.2
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
++.+|+.... ....++++++....-+.+..... .. ..+.+.- ++.||+.-...+.|.++|+
T Consensus 131 ~g~ly~~d~~----------~~~~I~~~~~dG~~~~~~~~~~~--~~-----P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 131 HGFMYWTDWG----------TPAKIKKGGLNGVDIYSLVTENI--QW-----PNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp TTEEEEEECS----------SSCEEEEEETTSCCEEEEECSSC--SC-----EEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCEEEEEccC----------CCCeEEEEcCCCCCeEEEEECCC--CC-----ceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 6788887421 12368888875433332211111 11 1344443 5899999877789999998
Q ss_pred CCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 243 KKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
....-+.+............+++.++.||+.... ...|.++|+.+.
T Consensus 194 dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~------~~~V~~~~~~~g 239 (316)
T 1ijq_A 194 NGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII------NEAIFSANRLTG 239 (316)
T ss_dssp TSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT------TTEEEEEETTTC
T ss_pred CCCceEEEeecCCccCCcEEEEEECCEEEEEECC------CCeEEEEeCCCC
Confidence 7543333322111111123455578999987632 346777776443
No 188
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=88.18 E-value=0.67 Score=42.15 Aligned_cols=63 Identities=10% Similarity=-0.013 Sum_probs=34.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCC--eecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDS--WELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~ 242 (392)
++.+|+.... ..+..+|..+++ |+.-. .+.. ...+..++.+|+.++..+.|+++|.
T Consensus 9 ~~~v~~gs~d------------g~v~a~d~~tG~~~W~~~~---~~~~-------s~p~~~~g~~~v~~s~dg~l~a~d~ 66 (369)
T 2hz6_A 9 ETLLFVSTLD------------GSLHAVSKRTGSIKWTLKE---DPVL-------QVPTHVEEPAFLPDPNDGSLYTLGS 66 (369)
T ss_dssp TTEEEEEETT------------SEEEEEETTTCCEEEEEEC---CCSC-------CCC-----CCEEECTTTCCEEEC--
T ss_pred CCEEEEEcCC------------CEEEEEECCCCCEEEEecC---CCce-------ecceEcCCCEEEEeCCCCEEEEEEC
Confidence 6677766432 158888877664 77543 1111 2345567888888777789999998
Q ss_pred CCC--ceee
Q 016239 243 KKH--VWSE 249 (392)
Q Consensus 243 ~~~--~W~~ 249 (392)
+++ .|+.
T Consensus 67 ~tG~~~w~~ 75 (369)
T 2hz6_A 67 KNNEGLTKL 75 (369)
T ss_dssp ---CCSEEC
T ss_pred CCCceeeee
Confidence 654 4554
No 189
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=87.97 E-value=12 Score=32.02 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=52.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
+++.++.|+.+ ..+.+||..+++-...-.... .. ......++.+.+.|+..+.+..++..+
T Consensus 78 ~~~~l~sgs~D-----------g~v~iw~~~~~~~~~~~~~h~---~~-----~~~~~~~~~~l~s~~~~~~~~~~~~~~ 138 (318)
T 4ggc_A 78 EGNYLAVGTSS-----------AEVQLWDVQQQKRLRNMTSHS---AR-----VGSLSWNSYILSSGSRSGHIHHHDVRV 138 (318)
T ss_dssp TSSEEEEEETT-----------SEEEEEETTTTEEEEEEECCS---SC-----EEEEEEETTEEEEEETTSEEEEEETTS
T ss_pred CCCEEEEEECC-----------CcEEEeecCCceeEEEecCcc---ce-----EEEeecCCCEEEEEecCCceEeeecCC
Confidence 56777777652 268888887765322211111 11 334455667777787777888887766
Q ss_pred CceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEE
Q 016239 245 HVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLW 287 (392)
Q Consensus 245 ~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~ 287 (392)
......................++++++.++.++ .+.+|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~----~i~iw 177 (318)
T 4ggc_A 139 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN----LVNVW 177 (318)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS----CEEEE
T ss_pred CceeEEEEcCccCceEEEEEcCCCCEEEEEecCc----ceeEE
Confidence 5433221111111112222334666666665433 56666
No 190
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.77 E-value=23 Score=34.99 Aligned_cols=103 Identities=6% Similarity=0.012 Sum_probs=51.8
Q ss_pred EEEEEeCCC-CCeecCCCCCCCCCCCCCccceeeEEECCE-EEEEee----cccEEEEEECCCCceeecccCCCCc---c
Q 016239 188 AVEIYDPHS-DSWELCPPLPADFRSGYSSQYLSSALFRGR-FYVFGI----YSFSVSSFDLKKHVWSEVQTLRPPG---V 258 (392)
Q Consensus 188 ~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~-ly~~gg----~~~~i~~yd~~~~~W~~i~~~~~~~---~ 258 (392)
.+.++|..+ ++-..+...... .. .....+.-+|+ |++... ....|+.+|+.+.+...+....... .
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~-~~----~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQ-DI----YLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCS-SE----EEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred EEEEEECCCCCceEEecCCCCc-ce----EEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 678888877 664443221010 00 00111113444 444432 2357999999988766653322111 1
Q ss_pred cceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecc
Q 016239 259 MFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 259 ~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~ 300 (392)
.......-+|++++.+..+. ...+|.+|..+. .+.+.
T Consensus 339 ~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EEESC
T ss_pred CCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-eeeee
Confidence 11222344778665553221 578998887655 55443
No 191
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=87.69 E-value=13 Score=32.15 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=51.9
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
++++++.|+.+ ..+.+||..+.. .+..+... .. ........+..++.++..+.|..||..+
T Consensus 226 ~~~~l~s~s~D-----------g~i~iwd~~~~~--~~~~~~~~-~~-----v~~~~~~~~~~~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 226 DGSLCASGGKD-----------GQAMLWDLNEGK--HLYTLDGG-DI-----INALCFSPNRYWLCAATGPSIKIWDLEG 286 (340)
T ss_dssp TSSEEEEEETT-----------CEEEEEETTTTE--EEEEEECS-SC-----EEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred CCCEEEEEeCC-----------CeEEEEEeccCc--eeeeecCC-ce-----EEeeecCCCCceeeccCCCEEEEEECCC
Confidence 56677776642 257888876543 22211111 11 1223333444556677778999999887
Q ss_pred Cceeec-ccCCC------CcccceeE-EeeCCeEEEEEeecCCCCCceeEEEe
Q 016239 245 HVWSEV-QTLRP------PGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 245 ~~W~~i-~~~~~------~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
..-... ..... .......+ ...++++++.|+.++ .+.||.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg----~v~iW~~ 335 (340)
T 4aow_A 287 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN----LVRVWQV 335 (340)
T ss_dssp TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS----CEEEEEE
T ss_pred CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC----EEEEEeC
Confidence 643221 11110 01111112 233777777776543 6888844
No 192
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=87.66 E-value=12 Score=31.80 Aligned_cols=62 Identities=6% Similarity=0.061 Sum_probs=32.8
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
++..++.++..+.|..||..+.. ..+..... ..........++. ++.++.++ .+.+| |..+.
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~-~~i~~~~~~~~~~-~~~~~~dg----~i~i~--d~~~~ 215 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQNDKVI-KTFSGIHN-DVVRHLAVVDDGH-FISCSNDG----LIKLV--DMHTG 215 (313)
T ss_dssp TTTEEEEEETTSCEEEEETTEEE-EEECSSCS-SCEEEEEEEETTE-EEEEETTS----EEEEE--ETTTC
T ss_pred CCCEEEEEECCCCEEEEecCceE-EEEeccCc-ccEEEEEEcCCCe-EEEccCCC----eEEEE--ECCch
Confidence 67788888888899999943322 22221111 1112222334667 55554332 56677 65543
No 193
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=87.52 E-value=5.8 Score=38.50 Aligned_cols=74 Identities=14% Similarity=0.165 Sum_probs=46.1
Q ss_pred eeeEEECCEEEEEeecccEEEEEECCCC--ceeecccCCCC-----cccceeEEeeCCeEEEEEeecCCCCCceeEEEee
Q 016239 218 LSSALFRGRFYVFGIYSFSVSSFDLKKH--VWSEVQTLRPP-----GVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 218 ~~~~~~~g~ly~~gg~~~~i~~yd~~~~--~W~~i~~~~~~-----~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d 290 (392)
.+.++.++++|+.+...+ |+++|.++. .|+.-...+.. .......+..+++||+... ...++.+|
T Consensus 62 ~~P~v~~g~vyv~~~~~~-v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD 133 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYSR-LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALN 133 (582)
T ss_dssp CCCEEETTEEEEEETTTE-EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEE
T ss_pred eccEEECCEEEEEcCCCC-EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEE
Confidence 355778999999876444 999998765 68764332221 0111233567888887542 23577778
Q ss_pred cCcc--ceEec
Q 016239 291 ELSM--EFSEI 299 (392)
Q Consensus 291 ~~~~--~W~~~ 299 (392)
..+. .|+.-
T Consensus 134 ~~TG~~~W~~~ 144 (582)
T 1flg_A 134 KNTGKVVWKKK 144 (582)
T ss_dssp SSSCCEEEEEE
T ss_pred CCCCCEEeeec
Confidence 7654 48753
No 194
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=87.40 E-value=15 Score=32.64 Aligned_cols=23 Identities=9% Similarity=0.106 Sum_probs=18.7
Q ss_pred CCEEEEEeecc---cEEEEEECCCCc
Q 016239 224 RGRFYVFGIYS---FSVSSFDLKKHV 246 (392)
Q Consensus 224 ~g~ly~~gg~~---~~i~~yd~~~~~ 246 (392)
++.+++.|+.. +.|..||..+.+
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCC
T ss_pred CCCEEEEEecCCCCceEEEEECCCCc
Confidence 57777888877 899999997764
No 195
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=87.30 E-value=26 Score=35.28 Aligned_cols=104 Identities=9% Similarity=-0.097 Sum_probs=57.2
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
++.||+.--. ....+++.+.....-+.+..-.. .. ..+.++- ++.|||.-...+.|.++|+
T Consensus 525 ~g~LYwtD~g----------~~~~I~~~~~dG~~~~~lv~~~l--~~-----P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 525 HGFMYWTDWG----------TPAKIKKGGLNGVDIYSLVTENI--QW-----PNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp TTEEEEEECS----------SSCEEEEEETTSCCEEEEECSSC--SC-----EEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCEEEecCC----------CCCeEEEEecCCCceEEEEeCCC--CC-----ceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 6789987411 12368888775543333321111 11 1333333 6899999877789999998
Q ss_pred CCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeec
Q 016239 243 KKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDE 291 (392)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~ 291 (392)
....=..+...........++++.+++||+.... ...|++.|.
T Consensus 588 dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~------~~~I~~~dk 630 (791)
T 3m0c_C 588 NGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII------NEAIFSANR 630 (791)
T ss_dssp TSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT------TTEEEEEET
T ss_pred CCCceEEEecCCCccCCCCEEEEeCCEEEEEECC------CCEEEEEeC
Confidence 6543333322111111223456678999988632 345666654
No 196
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=87.01 E-value=8.4 Score=36.91 Aligned_cols=52 Identities=6% Similarity=-0.093 Sum_probs=29.2
Q ss_pred EEEEEeC--CCCCeecCCCCCCCCCCCCCccceeeEEE-----CC-EEEEEeecccEEEEEECCCCce
Q 016239 188 AVEIYDP--HSDSWELCPPLPADFRSGYSSQYLSSALF-----RG-RFYVFGIYSFSVSSFDLKKHVW 247 (392)
Q Consensus 188 ~~~~yd~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----~g-~ly~~gg~~~~i~~yd~~~~~W 247 (392)
++.+||. .+.+ .+..++.. .. ....++. +| .+|+.+...+.|..+|..+.+-
T Consensus 201 ~V~v~D~~~~t~~--~~~~i~~g-~~-----p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 201 RIDMIDLWAKEPT--KVAEIKIG-IE-----ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEEEEETTSSSCE--EEEEEECC-SE-----EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred eEEEEECcCCCCc--EEEEEecC-CC-----cceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 6889998 4443 33333222 11 1233332 45 4666555568899999877653
No 197
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=86.90 E-value=18 Score=33.00 Aligned_cols=60 Identities=12% Similarity=0.176 Sum_probs=32.6
Q ss_pred EEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEee-CC-eEEEEEeecCCCCCceeEEEee
Q 016239 226 RFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS-PN-MLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 226 ~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~-~g-~l~v~gg~~~~~~~~~~v~~~d 290 (392)
.+++.|+..+.|..||..+.. ..+............+... ++ .+++.++.++ .+.+|.+.
T Consensus 291 ~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~----~i~iwd~~ 352 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDR----RLHVWDLS 352 (430)
T ss_dssp TEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTS----CCEEEEGG
T ss_pred CEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC----cEEEEeCC
Confidence 488889989999999997632 1111111111111122222 34 5677776443 68888443
No 198
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.71 E-value=14 Score=31.44 Aligned_cols=63 Identities=13% Similarity=0.208 Sum_probs=33.7
Q ss_pred eeEEECCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEE
Q 016239 219 SSALFRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLW 287 (392)
Q Consensus 219 ~~~~~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~ 287 (392)
..+..++.+++.|+..+.|..||.......... .............++.+++.++.++ .+.+|
T Consensus 108 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~----~i~i~ 170 (313)
T 3odt_A 108 CSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQA--HNASVWDAKVVSFSENKFLTASADK----TIKLW 170 (313)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTEEEEEEEC--CSSCEEEEEEEETTTTEEEEEETTS----CEEEE
T ss_pred EEEEecCCEEEEEeCCCCEEEEcCCcEEEeccc--CCCceeEEEEccCCCCEEEEEECCC----CEEEE
Confidence 344457778888888899999993332222211 1111111111222677777765433 57777
No 199
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=86.59 E-value=9.4 Score=37.85 Aligned_cols=111 Identities=16% Similarity=0.197 Sum_probs=66.3
Q ss_pred EEeecceEEeecC---cceEecCCcC--ceeecCCCCcC--------ccCceEEEEEcCCCCcccccCCcccCCCeEEEE
Q 016239 105 FIGANGFFFTTTP---RFGFSRILNT--SWHLTSPLRFS--------RINPLVGVFYDHDRGHCDLASGFACNLPKFIVV 171 (392)
Q Consensus 105 ~~~~~g~i~v~gg---~~~ynp~~~~--~W~~~~~~~~~--------r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~ 171 (392)
.++.++.||+.+. ++.+|.. ++ .|+.-...+.. ....+.++. +++||+.
T Consensus 66 P~v~~g~vyv~~~~~~v~AlD~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~g~v~v~ 127 (689)
T 1yiq_A 66 PIVVDGVMYTTGPFSVVYALDAR-DGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-----------------KGKVYVG 127 (689)
T ss_dssp CEEETTEEEEECGGGCEEEEETT-TCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-----------------TTEEEEE
T ss_pred CEEECCEEEEEcCCCeEEEEECC-CCceeEEEcCCCCccccccccccCCCCccEEE-----------------CCEEEEE
Confidence 3456899998754 4788887 44 68754433211 011223444 7888886
Q ss_pred eceeecCcccccccceEEEEEeCCCCC--eecCCC-CCC-CCCCCCCccceeeEEECCEEEEEee-----cccEEEEEEC
Q 016239 172 GGVRFIGGLVDIEDRLAVEIYDPHSDS--WELCPP-LPA-DFRSGYSSQYLSSALFRGRFYVFGI-----YSFSVSSFDL 242 (392)
Q Consensus 172 gG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~-~~~-~~~~~~~~~~~~~~~~~g~ly~~gg-----~~~~i~~yd~ 242 (392)
... ..+..+|..+++ |+.-.. -+. .... ..+.++.++.+|+-.+ ..+.|.+||.
T Consensus 128 ~~d------------g~l~AlDa~TG~~~W~~~~~~~~~~~~~~-----~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~ 190 (689)
T 1yiq_A 128 VLD------------GRLEAIDAKTGQRAWSVDTRADHKRSYTI-----TGAPRVVNGKVVIGNGGAEFGVRGYVTAYDA 190 (689)
T ss_dssp CTT------------SEEEEEETTTCCEEEEEECCSCTTSCCBC-----CSCCEEETTEEEECCBCTTTCCBCEEEEEET
T ss_pred ccC------------CEEEEEECCCCCEeeeecCcCCCCCCccc-----cCCcEEECCEEEEEeCCCccCCCCEEEEEEC
Confidence 432 157888887764 876542 111 1111 1355677999988543 2468999999
Q ss_pred CCCc--eeec
Q 016239 243 KKHV--WSEV 250 (392)
Q Consensus 243 ~~~~--W~~i 250 (392)
.+.+ |+.-
T Consensus 191 ~tG~~~W~~~ 200 (689)
T 1yiq_A 191 ETGKEAWRFY 200 (689)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 8774 7653
No 200
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=86.51 E-value=13 Score=31.06 Aligned_cols=76 Identities=9% Similarity=-0.067 Sum_probs=43.4
Q ss_pred CCEEEEEeecccEEEEEECCCCceee----cc-cCCCC-----cccceeEEe--eCCeEEEEEeecCCCCCceeEEEeec
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE----VQ-TLRPP-----GVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDE 291 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~----i~-~~~~~-----~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~ 291 (392)
++++|+|-|. ..++||..+++... |. ..+.. .....+++. .++++|++-| ...|+||.
T Consensus 127 ~gk~yfFkG~--~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--------~~ywr~d~ 196 (225)
T 3oyo_A 127 GKEVYLFKGN--KYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--------QNYVRIDF 196 (225)
T ss_dssp TTEEEEEETT--EEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--------TEEEEEEC
T ss_pred CCcEEEEeCC--eEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeC
Confidence 6899999874 78999977665443 11 11111 112223344 4799999874 36889998
Q ss_pred Ccc--ceEecccCCHHHHHhh
Q 016239 292 LSM--EFSEIAIMPHDFLYSL 310 (392)
Q Consensus 292 ~~~--~W~~~~~~p~~~~~~~ 310 (392)
.+. .=+.+.. |..+...|
T Consensus 197 ~~g~~~~~~~~g-Pk~i~~~w 216 (225)
T 3oyo_A 197 TPGGKADTLVGN-IRPILDGW 216 (225)
T ss_dssp CTTCGGGCEECC-CEEHHHHS
T ss_pred CcCCccceecCC-ceEhhHcC
Confidence 722 2233444 55444333
No 201
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=86.50 E-value=15 Score=31.71 Aligned_cols=63 Identities=10% Similarity=-0.029 Sum_probs=41.7
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CC-EEEEEeecccEEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RG-RFYVFGIYSFSVSSFD 241 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g-~ly~~gg~~~~i~~yd 241 (392)
++.+|+.... ...+.++|..+++....-..+.. .. .+.+ +| .+|+.+...+.|..+|
T Consensus 9 ~~~~~v~~~~-----------~~~v~~~d~~~~~~~~~~~~~~~--------~~-~~~~s~dg~~l~~~~~~~~~i~~~d 68 (331)
T 3u4y_A 9 SNFGIVVEQH-----------LRRISFFSTDTLEILNQITLGYD--------FV-DTAITSDCSNVVVTSDFCQTLVQIE 68 (331)
T ss_dssp CCEEEEEEGG-----------GTEEEEEETTTCCEEEEEECCCC--------EE-EEEECSSSCEEEEEESTTCEEEEEE
T ss_pred CCEEEEEecC-----------CCeEEEEeCcccceeeeEEccCC--------cc-eEEEcCCCCEEEEEeCCCCeEEEEE
Confidence 6778887654 22789999988877544332221 13 3333 45 4887777678999999
Q ss_pred CCCCce
Q 016239 242 LKKHVW 247 (392)
Q Consensus 242 ~~~~~W 247 (392)
+.+++.
T Consensus 69 ~~~~~~ 74 (331)
T 3u4y_A 69 TQLEPP 74 (331)
T ss_dssp CSSSSC
T ss_pred CCCCce
Confidence 988874
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=86.18 E-value=13 Score=35.94 Aligned_cols=53 Identities=8% Similarity=-0.122 Sum_probs=31.1
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-----CC-EEEEEeecccEEEEEECCCCc
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-----RG-RFYVFGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----~g-~ly~~gg~~~~i~~yd~~~~~ 246 (392)
.+.+||..+.+-+.+..++.. .. ....++. +| .+|+.....+.+..+|..+.+
T Consensus 219 ~V~viD~~~~t~~~v~~i~~G-~~-----P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 219 KVNMIDLWMKEPTTVAEIKIG-SE-----ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp EEEEEETTSSSCCEEEEEECC-SE-----EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred eEEEEECCCCCCcEeEEEecC-CC-----CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 688999852233444333332 11 1233333 45 688887777899999987654
No 203
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=86.14 E-value=9.8 Score=40.34 Aligned_cols=92 Identities=8% Similarity=0.018 Sum_probs=48.5
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCCceeecccCCCCcc-cceeEEee
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGV-MFSFLIAS 266 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~-~~~~~~~~ 266 (392)
.+.+||..+++-...-..... ... ..+..-++..++.|+.++.|..||..+.+- +........ ........
T Consensus 1066 ~v~vwd~~~~~~~~~~~~~~~-~v~-----~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~--~~~l~~h~~~v~~~~~s~ 1137 (1249)
T 3sfz_A 1066 TVKVWNVITGRIERDFTCHQG-TVL-----SCAISSDATKFSSTSADKTAKIWSFDLLSP--LHELKGHNGCVRCSAFSL 1137 (1249)
T ss_dssp EEEEEETTTTCCCEEEECCSS-CCC-----CEEECSSSSSCEEECCSSCCCEECSSSSSC--SBCCCCCSSCEEEEEECS
T ss_pred cEEEEECCCCceeEEEcccCC-cEE-----EEEECCCCCEEEEEcCCCcEEEEECCCcce--eeeeccCCCcEEEEEECC
Confidence 688888877653211110111 110 122223677778888888899999876542 222221111 11222334
Q ss_pred CCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 267 PNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 267 ~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
++++++.|+.++ .+.+| |..+
T Consensus 1138 dg~~lat~~~dg----~i~vw--d~~~ 1158 (1249)
T 3sfz_A 1138 DGILLATGDDNG----EIRIW--NVSD 1158 (1249)
T ss_dssp SSSEEEEEETTS----CCCEE--ESSS
T ss_pred CCCEEEEEeCCC----EEEEE--ECCC
Confidence 788888776443 57888 5444
No 204
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=86.13 E-value=22 Score=33.15 Aligned_cols=63 Identities=13% Similarity=0.133 Sum_probs=38.9
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-----cc-cCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-----VQ-TLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-----i~-~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
++++|+|-| +..++||..+++-.. |. ..+.......+++..+|++|++-| ...|+||..+.+=
T Consensus 367 ~~k~yfFkG--~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFkg--------~~ywr~d~~~~~v 435 (450)
T 1su3_A 367 TGKTYFFVA--NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHG--------TRQYKFDPKTKRI 435 (450)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEET--------TEEEEEETTTTEE
T ss_pred CCeEEEEeC--CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEeC--------CEEEEEECCcceE
Confidence 589999987 478999987543221 21 111111122233456899999864 3578998876653
No 205
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.05 E-value=26 Score=33.98 Aligned_cols=122 Identities=11% Similarity=0.017 Sum_probs=67.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCC-CccceeeEEE-CCEEEEEeec-ccEEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGY-SSQYLSSALF-RGRFYVFGIY-SFSVSSFD 241 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~~-~g~ly~~gg~-~~~i~~yd 241 (392)
++++|+.+..+ ....++.+|..+++++.+........... +......+.. ++.+++.+.. ...|+.+|
T Consensus 252 dg~l~~~~~~~---------~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 322 (662)
T 3azo_A 252 DGSLIVATDRT---------GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILD 322 (662)
T ss_dssp TSCEEEEECTT---------SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEE
T ss_pred CCeEEEEECCC---------CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEE
Confidence 55677665431 12378899988888887754322110000 0000122332 6777776654 23677889
Q ss_pred CCCCceeecccCCCCcccceeE-EeeCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 242 LKKHVWSEVQTLRPPGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 242 ~~~~~W~~i~~~~~~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
..+++.+.+..... ....+ ...++.++++..... ....+|.+|..+.+.+.+..
T Consensus 323 ~~~~~~~~l~~~~~---~~~~~~s~~~~~~~~~~~~~~---~~~~i~~~d~~~g~~~~l~~ 377 (662)
T 3azo_A 323 PESGELVDAAGPWT---EWAATLTVSGTRAVGVAASPR---TAYEVVELDTVTGRARTIGA 377 (662)
T ss_dssp TTTTEEEECCSSCC---EEEEEEEEETTEEEEEEEETT---EEEEEEEEETTTCCEEEEES
T ss_pred CCCCcEEEecCCCC---eEEEEEecCCCEEEEEEcCCC---CCCEEEEEECCCCceEEeec
Confidence 88777666643211 11222 334666766654322 25789999988877777643
No 206
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=85.91 E-value=17 Score=31.63 Aligned_cols=66 Identities=17% Similarity=0.128 Sum_probs=37.0
Q ss_pred CCEEEEEeecccEEEEEECCCCc--eeecccCCCC-cccceeEE-----eeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV--WSEVQTLRPP-GVMFSFLI-----ASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~--W~~i~~~~~~-~~~~~~~~-----~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
++.+.+.|+..+.|..||+.+.. ...+...... ......+. ..++++++.|+.++ .+.+| |..+.+
T Consensus 128 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~----~i~i~--d~~~~~ 201 (357)
T 3i2n_A 128 GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG----DIKLF--DLRNMA 201 (357)
T ss_dssp CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS----EEEEE--ETTTTE
T ss_pred CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC----eEEEE--ECccCc
Confidence 56777888888899999998764 2223221111 11111121 24777777775432 56666 655544
No 207
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=85.89 E-value=22 Score=34.31 Aligned_cols=56 Identities=9% Similarity=-0.131 Sum_probs=31.4
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC---cceEecC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP---RFGFSRI 124 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg---~~~ynp~ 124 (392)
...+|+.... .+.+..+|..+++-.. .++.....+.++.. +..+|+.+. +.++|+.
T Consensus 166 ~~~~~V~~~~-----~~~V~viD~~t~~v~~--~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRD-----AGQIALIDGSTYEIKT--VLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETT-----TTEEEEEETTTCCEEE--EEECSSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CceEEEEeCC-----CCeEEEEECCCCeEEE--EEeCCCCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 4566665432 2578899998876432 22222222344443 456787653 4788873
No 208
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=85.74 E-value=16 Score=33.66 Aligned_cols=131 Identities=10% Similarity=0.040 Sum_probs=66.2
Q ss_pred cceEEeec---CcceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCccccccc
Q 016239 109 NGFFFTTT---PRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIED 185 (392)
Q Consensus 109 ~g~i~v~g---g~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~ 185 (392)
++.||+.. .+.++|+. +++...+.. .. .......+ +. +++.||+..... +..
T Consensus 149 ~g~Lyv~d~~~~I~~id~~-~~~v~~~~~--~~-~~P~~ia~-d~-------------~G~~lyvad~~~-------~~~ 203 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFE-KEYVSTVYS--GL-SKVRTICW-TH-------------EADSMIITNDQN-------NND 203 (430)
T ss_dssp EEEEEEEEBTEEEEEEETT-TTEEEEEEC--CC-SCEEEEEE-CT-------------TSSEEEEEECCS-------CTT
T ss_pred CCeEEEEeCCCcEEEEECC-CCEEEEEec--CC-CCcceEEE-eC-------------CCCEEEEEeCCC-------Ccc
Confidence 57888874 35788887 566655433 11 11122222 11 144588885421 112
Q ss_pred ceEEEEEeCCCCCee---cCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccc
Q 016239 186 RLAVEIYDPHSDSWE---LCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMF 260 (392)
Q Consensus 186 ~~~~~~yd~~~~~W~---~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~ 260 (392)
...+..++. .+.+. .+..+..+ +..++. +|.||+..-..+.|++||+.+..-..+........-.
T Consensus 204 ~~~v~~~~~-~g~~~~~~~l~~~~~p---------~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~ 273 (430)
T 3tc9_A 204 RPNNYILTR-ESGFKVITELTKGQNC---------NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEF 273 (430)
T ss_dssp SEEEEEEEG-GGTSCSEEEEEECSSC---------CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCE
T ss_pred cceEEEEeC-CCceeeeeeeccCCCc---------eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcce
Confidence 224555554 33343 22222222 333333 6889998766679999999877653332222211111
Q ss_pred eeEEeeCCe-EEEEE
Q 016239 261 SFLIASPNM-LVLAG 274 (392)
Q Consensus 261 ~~~~~~~g~-l~v~g 274 (392)
...+..+|+ ||+..
T Consensus 274 gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 274 HIQFHPSGNYAYIVV 288 (430)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred eEEEcCCCCEEEEEE
Confidence 222333555 88875
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=85.71 E-value=17 Score=31.75 Aligned_cols=104 Identities=9% Similarity=-0.058 Sum_probs=58.6
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceee-EEECCEEEEEeecccEEEEEECC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSS-ALFRGRFYVFGIYSFSVSSFDLK 243 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~g~ly~~gg~~~~i~~yd~~ 243 (392)
++.+|+++.. ...+.+||+.++..+... .+.. . .+. ..-+|.+++.. ...|+.||+.
T Consensus 60 ~~~l~~~d~~-----------~~~i~~~d~~~~~~~~~~-~~~~--v------~~i~~~~dg~l~v~~--~~gl~~~d~~ 117 (326)
T 2ghs_A 60 SGTAWWFNIL-----------ERELHELHLASGRKTVHA-LPFM--G------SALAKISDSKQLIAS--DDGLFLRDTA 117 (326)
T ss_dssp TTEEEEEEGG-----------GTEEEEEETTTTEEEEEE-CSSC--E------EEEEEEETTEEEEEE--TTEEEEEETT
T ss_pred CCEEEEEECC-----------CCEEEEEECCCCcEEEEE-CCCc--c------eEEEEeCCCeEEEEE--CCCEEEEECC
Confidence 5678887543 126889998877655432 1211 1 222 23478887765 3469999999
Q ss_pred CCceeecccCCC---CcccceeEEeeCCeEEEEEeecCCCCCceeEEEee
Q 016239 244 KHVWSEVQTLRP---PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 244 ~~~W~~i~~~~~---~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d 290 (392)
+++.+.+..... ........+.-+|+||+.............||++|
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 888876643321 11112223344788877543221122246788888
No 210
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=85.68 E-value=29 Score=34.19 Aligned_cols=97 Identities=12% Similarity=0.057 Sum_probs=54.5
Q ss_pred ceEEEEEeCCC------C--CeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc---cEEEEEECCCC---ceeecc
Q 016239 186 RLAVEIYDPHS------D--SWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS---FSVSSFDLKKH---VWSEVQ 251 (392)
Q Consensus 186 ~~~~~~yd~~~------~--~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~---~~i~~yd~~~~---~W~~i~ 251 (392)
...++++|..+ + .++.+..-... . .......++.||+.+... ..|+.+|+.+. .|+.+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~---~----~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEG---E----YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSS---C----EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCc---E----EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 34788888765 3 46665431111 1 122223456788876533 47999999775 487764
Q ss_pred cCCCCcccceeEEee-CCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 252 TLRPPGVMFSFLIAS-PNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 252 ~~~~~~~~~~~~~~~-~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
..... .....+... +++|++....+. ...||.+|..+.
T Consensus 331 ~~~~~-~~~~~~~~~~~~~lv~~~~~~g----~~~l~~~~~~~g 369 (710)
T 2xdw_A 331 PEHEK-DVLEWVACVRSNFLVLCYLHDV----KNTLQLHDLATG 369 (710)
T ss_dssp CCCSS-CEEEEEEEETTTEEEEEEEETT----EEEEEEEETTTC
T ss_pred CCCCC-CeEEEEEEEcCCEEEEEEEECC----EEEEEEEECCCC
Confidence 43221 112223334 778877765432 567888887443
No 211
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=85.64 E-value=28 Score=33.93 Aligned_cols=130 Identities=9% Similarity=-0.072 Sum_probs=70.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEE--ECCEEEEEe-ecccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSAL--FRGRFYVFG-IYSFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~--~~g~ly~~g-g~~~~i~~ 239 (392)
++++|+.-.. ...+++++.....=+.+. .+..| ...++ .+|.||+.. |....|++
T Consensus 95 ~~~ly~~d~~-----------~~~I~v~~~dG~~~~~l~~~~l~~P---------~~Iavdp~~g~ly~tD~g~~~~I~r 154 (619)
T 3s94_A 95 GEKLYWTDSE-----------TNRIEVSNLDGSLRKVLFWQELDQP---------RAIALDPSSGFMYWTDWGEVPKIER 154 (619)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTSCSCEEEECSSCSCC---------CCEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCEEEEEeCC-----------CCEEEEEECCCCCEEEEEeCCCCCC---------ceEEEecCCCeEEEeccCCCCEEEE
Confidence 6789888432 236888887654322222 22222 23344 268999986 43468999
Q ss_pred EECCCCceeecccCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccC
Q 016239 240 FDLKKHVWSEVQTLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDD 317 (392)
Q Consensus 240 yd~~~~~W~~i~~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~ 317 (392)
.++....-..+..... ..-..++.. +++||+.... ...|+++|.+...=+.+.. ...
T Consensus 155 ~~~dG~~~~~l~~~~~--~~P~Glald~~~~~LY~aD~~------~~~I~~~~~dG~~~~~~~~--~~~----------- 213 (619)
T 3s94_A 155 AGMDGSSRFIIINSEI--YWPNGLTLDYEEQKLYWADAK------LNFIHKSNLDGTNRQAVVK--GSL----------- 213 (619)
T ss_dssp EETTSCSCEEEECSSC--SSEEEEEEETTTTEEEEEETT------TCCEEEESSSCCEEC--------------------
T ss_pred EECCCCceEEEEeCCC--CCCcEEEEEccCCEEEEEeCC------CCeEEEecCCCCccEEEEe--CCC-----------
Confidence 9886543333322111 112233333 7899998532 3467777876543222211 011
Q ss_pred ccceeEEEEeCCEEEEEec
Q 016239 318 KFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 318 ~~~~~~~~~~~~~i~v~gg 336 (392)
...+++++.++.||+..-
T Consensus 214 -~~P~gi~~~~~~ly~td~ 231 (619)
T 3s94_A 214 -PHPFALTLFEDILYWTDW 231 (619)
T ss_dssp ---CCCEEESSSEEEEECT
T ss_pred -CCceEEEEeCCEEEEecC
Confidence 125677778889999864
No 212
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=85.63 E-value=17 Score=31.45 Aligned_cols=66 Identities=14% Similarity=0.056 Sum_probs=39.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeE-EECCEEEEEeecccEEEEEECC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSA-LFRGRFYVFGIYSFSVSSFDLK 243 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~g~ly~~gg~~~~i~~yd~~ 243 (392)
++++|+.... .....+..+|..+++.+.+...+.. +.. ...+ ..++.+|+.....+.|+++|+.
T Consensus 82 dG~l~vad~~---------~~~~~v~~~d~~~g~~~~~~~~~~~-~~~-----~g~~~~~~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 82 NGDLVATGWN---------ADSIPVVSLVKSDGTVETLLTLPDA-IFL-----NGITPLSDTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp TSCEEEEEEC---------TTSCEEEEEECTTSCEEEEEECTTC-SCE-----EEEEESSSSEEEEEETTTTEEEEEETT
T ss_pred CCcEEEEecc---------CCcceEEEEcCCCCeEEEEEeCCCc-ccc-----CcccccCCCcEEEEECCCCeEEEEeCC
Confidence 5678886422 0112477888878877665544332 221 2222 2356788876556799999987
Q ss_pred CC
Q 016239 244 KH 245 (392)
Q Consensus 244 ~~ 245 (392)
+.
T Consensus 147 ~~ 148 (306)
T 2p4o_A 147 QP 148 (306)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 213
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=85.57 E-value=20 Score=32.11 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=35.6
Q ss_pred CEEEEEeecccEEEEEECCCCceeecc-cCCCCcccc--eeEE--eeCCeEEEEEeecCCCCCceeEEEeecC
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSEVQ-TLRPPGVMF--SFLI--ASPNMLVLAGMCNAPRGPSFNLWKVDEL 292 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~i~-~~~~~~~~~--~~~~--~~~g~l~v~gg~~~~~~~~~~v~~~d~~ 292 (392)
+...+.|+.++.|..||+.+++-...- ...+..... ..+. ..++.+++.|+.+. .+.+| |..
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~----~v~~w--d~~ 236 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT----TVRLW--DLR 236 (380)
T ss_dssp SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS----CEEEE--ETT
T ss_pred CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC----eEEEE--ECC
Confidence 445667777889999999887643321 111111111 1112 12678888887554 68888 543
No 214
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=85.41 E-value=10 Score=34.76 Aligned_cols=62 Identities=10% Similarity=0.162 Sum_probs=34.1
Q ss_pred CCEEEEEeecccEEEEEECCCCc-eeecccCCCCcccceeEEe-eCC-eEEEEEeecCCCCCceeEEEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV-WSEVQTLRPPGVMFSFLIA-SPN-MLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~-W~~i~~~~~~~~~~~~~~~-~~g-~l~v~gg~~~~~~~~~~v~~~ 289 (392)
++.+++.++..+.|..||+.+.. ...+............+.. -++ .+++.|+.++ .+.+|.+
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg----~v~vwd~ 307 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK----TVALWDL 307 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS----EEEEEET
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC----eEEEEeC
Confidence 56788888888999999998753 1111111111111112222 234 4777776543 6777733
No 215
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=85.38 E-value=26 Score=33.31 Aligned_cols=63 Identities=13% Similarity=-0.022 Sum_probs=35.1
Q ss_pred EEEEeecccEEEEEECCCCceeecccCCCC-cccceeEE-eeC-CeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 227 FYVFGIYSFSVSSFDLKKHVWSEVQTLRPP-GVMFSFLI-ASP-NMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 227 ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~-~~~~~~~~-~~~-g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+++.|+..+.|..||..+.+-...-..... ......+. ..+ +++++.++.++ .+.+| |..+.+
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~vw--d~~~~~ 240 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR----KISCF--DGKSGE 240 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC----CEEEE--ETTTCC
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC----eEEEE--ECCCCC
Confidence 777888889999999876653322111111 00122222 235 77777776443 57777 655443
No 216
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=85.36 E-value=20 Score=31.91 Aligned_cols=67 Identities=10% Similarity=-0.044 Sum_probs=35.6
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccC---C-CCcccceeE-EeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTL---R-PPGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~---~-~~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
++ +++.|+..+.|..||+.+.+-...-.. . ........+ ...++++++.++.+.. ...+.+| |..+.
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-~g~i~i~--d~~~~ 268 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-FGCITLY--ETEFG 268 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-EEEEEEE--ETTTC
T ss_pred Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-CceEEEE--ECCCC
Confidence 56 777788889999999987654332111 1 001111222 2336777777764310 0156666 65543
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=85.34 E-value=22 Score=32.47 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=37.9
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccC---CCCccc-ceeEEee--CCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTL---RPPGVM-FSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~---~~~~~~-~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
+|.||+.. ..+.|++||+.+.....+... ...... ...++.. ++.||+.... ...|+++|.+..
T Consensus 230 ~g~lyv~d-~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------~~~I~~~~~~g~ 299 (409)
T 3hrp_A 230 EEWLYFVD-SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------LSSVYKITPDGE 299 (409)
T ss_dssp SSEEEEEC-TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------TTEEEEECTTCC
T ss_pred CCeEEEEE-CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------CCEEEEEecCCC
Confidence 68899944 367899999988765554211 111111 1133433 6899987532 346777777654
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=85.23 E-value=13 Score=32.14 Aligned_cols=76 Identities=8% Similarity=0.062 Sum_probs=44.4
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCC---cccceeEEeeCCeEEEE----Eeec-------CCCCCceeEEEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPP---GVMFSFLIASPNMLVLA----GMCN-------APRGPSFNLWKV 289 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~---~~~~~~~~~~~g~l~v~----gg~~-------~~~~~~~~v~~~ 289 (392)
+|++|+.....+.|..||+. ++.+.+...... ..-....+.-+|+||+. |... ........||++
T Consensus 96 dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 96 QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 68888876545689999986 666655332111 11122334458899985 2110 001124689999
Q ss_pred ecCccceEecc
Q 016239 290 DELSMEFSEIA 300 (392)
Q Consensus 290 d~~~~~W~~~~ 300 (392)
|+.+.+.+.+.
T Consensus 175 d~~~g~~~~~~ 185 (305)
T 3dr2_A 175 PPDGSPLQRMA 185 (305)
T ss_dssp CSSSCCCEEEE
T ss_pred cCCCCcEEEEe
Confidence 99877776653
No 219
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=85.14 E-value=20 Score=31.82 Aligned_cols=60 Identities=12% Similarity=0.160 Sum_probs=33.4
Q ss_pred CEEEEEeecccEEEEEECCCCceeecccCCCC-cccceeEEeeCCeEEEEEeecCCCCCceeEEEee
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPP-GVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~-~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d 290 (392)
+..+++++..+.|..||..+.+-... +... ..........++++++.|+.++ .+.+|.++
T Consensus 304 ~~~~~~~~~~~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg----~i~iw~~~ 364 (408)
T 4a11_B 304 SSEFVFVPYGSTIAVYTVYSGEQITM--LKGHYKTVDCCVFQSNFQELYSGSRDC----NILAWVPS 364 (408)
T ss_dssp SSCEEEEEETTEEEEEETTTCCEEEE--ECCCSSCEEEEEEETTTTEEEEEETTS----CEEEEEEC
T ss_pred CceEEEEecCCEEEEEECcCCcceee--eccCCCeEEEEEEcCCCCEEEEECCCC----eEEEEeCC
Confidence 34555556678999999877643222 2211 1111222334677777776543 68888543
No 220
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=85.12 E-value=23 Score=32.48 Aligned_cols=72 Identities=11% Similarity=0.004 Sum_probs=41.5
Q ss_pred CEEEEEee-cccEEEEEEC--CC-CceeecccCCCCcccceeEEeeCCeEEEEEeecCC---CCCceeEEEeecCccceE
Q 016239 225 GRFYVFGI-YSFSVSSFDL--KK-HVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAP---RGPSFNLWKVDELSMEFS 297 (392)
Q Consensus 225 g~ly~~gg-~~~~i~~yd~--~~-~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~---~~~~~~v~~~d~~~~~W~ 297 (392)
+...++++ ..+.|..||. .+ .++..+...... .....+....+.+++....... ....+.+|.++..+..|+
T Consensus 319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 44444444 6788999998 33 344444333322 1223344455777776643321 123589999998888886
No 221
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=84.91 E-value=23 Score=32.34 Aligned_cols=149 Identities=9% Similarity=-0.006 Sum_probs=74.1
Q ss_pred CCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEeecceEEeecC-----cceEecCCcCc-eeecCC
Q 016239 61 PRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGANGFFFTTTP-----RFGFSRILNTS-WHLTSP 134 (392)
Q Consensus 61 ~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g~i~v~gg-----~~~ynp~~~~~-W~~~~~ 134 (392)
..+.||+.... ...+..+|+.++.-..+........ .++...++.+|+... ++++++. ++. ...+..
T Consensus 140 ~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~-~~~~~~~~g~ 212 (409)
T 3hrp_A 140 GNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA-SGWAPTRIGQ 212 (409)
T ss_dssp STTEEEEEETT-----TTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG-GTTCEEEEEE
T ss_pred CCCCEEEEecC-----CCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcC-CCceeEEeee
Confidence 34456665332 2467888988766554422211111 222222556777642 4677876 322 223311
Q ss_pred CC--cCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCC
Q 016239 135 LR--FSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSG 212 (392)
Q Consensus 135 ~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~ 212 (392)
.. ....-+.+++. ..++.||+... ...+.+||+.+..-..+......-...
T Consensus 213 ~~~~~~~~p~~iav~---------------p~~g~lyv~d~------------~~~I~~~d~~~~~~~~~~~~~~~g~~~ 265 (409)
T 3hrp_A 213 LGSTFSGKIGAVALD---------------ETEEWLYFVDS------------NKNFGRFNVKTQEVTLIKQLELSGSLG 265 (409)
T ss_dssp CCTTSCSCCCBCEEC---------------TTSSEEEEECT------------TCEEEEEETTTCCEEEEEECCCCSCCC
T ss_pred ccchhcCCcEEEEEe---------------CCCCeEEEEEC------------CCcEEEEECCCCCEEEEecccccCCCC
Confidence 11 11111223222 11678888422 126889998877655442111100000
Q ss_pred CCccce-eeEEE--CCEEEEEeecccEEEEEECCCC
Q 016239 213 YSSQYL-SSALF--RGRFYVFGIYSFSVSSFDLKKH 245 (392)
Q Consensus 213 ~~~~~~-~~~~~--~g~ly~~gg~~~~i~~yd~~~~ 245 (392)
.... ..++. ++.||+.....+.|.+||+...
T Consensus 266 --~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 266 --TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp --CSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred --CCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC
Confidence 0001 34444 5899999877789999998654
No 222
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=84.79 E-value=14 Score=36.45 Aligned_cols=118 Identities=14% Similarity=0.059 Sum_probs=64.8
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCC--eecCCCCCCCC----CCCCCccceeeEEECCEEEEEeecccEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDS--WELCPPLPADF----RSGYSSQYLSSALFRGRFYVFGIYSFSVS 238 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~----~~~~~~~~~~~~~~~g~ly~~gg~~~~i~ 238 (392)
++++|+.... ..+..+|..+++ |+.-...+... ... ....+.++.++++|+.. ..+.|+
T Consensus 66 ~g~vyv~~~~------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~v~~-~dg~l~ 130 (668)
T 1kv9_A 66 DGVIYTSMSW------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCD--AVNRGVALWGDKVYVGT-LDGRLI 130 (668)
T ss_dssp TTEEEEEEGG------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTC--SCCCCCEEEBTEEEEEC-TTSEEE
T ss_pred CCEEEEECCC------------CeEEEEECCCChhceEECCCCCcccccccccc--CCccceEEECCEEEEEc-CCCEEE
Confidence 8899987543 157778876654 77643322110 000 00134566788888754 457899
Q ss_pred EEECCCC--ceeecccCCC-CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc--ceEe
Q 016239 239 SFDLKKH--VWSEVQTLRP-PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM--EFSE 298 (392)
Q Consensus 239 ~yd~~~~--~W~~i~~~~~-~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~--~W~~ 298 (392)
++|.++. .|+.-...+. .......-++.++.+|+..... .......|+.||..+. .|+.
T Consensus 131 alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 131 ALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGA-EYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCT-TTCCBCEEEEEETTTCCEEEEE
T ss_pred EEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCC-CcCCCCEEEEEECCCCcEEEEe
Confidence 9998766 5876432221 1111222345688877643221 1112456778887654 3875
No 223
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=84.75 E-value=39 Score=35.66 Aligned_cols=68 Identities=6% Similarity=0.087 Sum_probs=40.0
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
++...++|+..+.|..||..+.+........... ........+++.++.++.++ .+.+| |..+.+...
T Consensus 972 ~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~-v~~l~~s~dg~~l~s~~~dg----~i~vw--d~~~~~~~~ 1039 (1249)
T 3sfz_A 972 HLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA-VRHIQFTADGKTLISSSEDS----VIQVW--NWQTGDYVF 1039 (1249)
T ss_dssp TSSEEEEEETTSCCEEEETTTTSCEEECCCCSSC-CCCEEECSSSSCEEEECSSS----BEEEE--ETTTTEEEC
T ss_pred CCCEEEEEcCCCCEEEEEcCCCceeeecccCCCc-eEEEEECCCCCEEEEEcCCC----EEEEE--ECCCCceEE
Confidence 6778888888889999999876543321111111 11222334677777765433 67788 666655443
No 224
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=84.69 E-value=22 Score=31.83 Aligned_cols=25 Identities=20% Similarity=0.009 Sum_probs=20.0
Q ss_pred CEEEEEeecccEEEEEECCCCceee
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSE 249 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~ 249 (392)
+.+++.++..+.|..||+.+.+-..
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVI 202 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEE
T ss_pred CcEEEEEcCCCCEEEEECCCCCcce
Confidence 5788888888899999998876433
No 225
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.43 E-value=20 Score=35.35 Aligned_cols=62 Identities=5% Similarity=-0.143 Sum_probs=30.6
Q ss_pred EEEEEECCC-CceeecccCCC-CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 236 SVSSFDLKK-HVWSEVQTLRP-PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 236 ~i~~yd~~~-~~W~~i~~~~~-~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
.|+.+|+.+ .+-..+..... ......... -+|+.+++...... .....|+.+|..+.+...+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~-~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD-QKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT-SSEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc-CCeEEEEEEECCCCceEEE
Confidence 788889887 66544432211 111112223 55555444432211 1246677778776654443
No 226
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=83.75 E-value=20 Score=30.72 Aligned_cols=62 Identities=8% Similarity=0.024 Sum_probs=37.0
Q ss_pred CEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEee-CC----eEEEEEeecCCCCCceeEEEee
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS-PN----MLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~-~g----~l~v~gg~~~~~~~~~~v~~~d 290 (392)
+.+++.++..+.+..++....+...+............+... ++ ++++.|+.++ .+.+|.+.
T Consensus 182 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg----~i~iwd~~ 248 (351)
T 3f3f_A 182 PEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG----RIRIFKIT 248 (351)
T ss_dssp CCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS----CEEEEEEE
T ss_pred CcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC----eEEEEeCC
Confidence 677888887778877777777765554443322222222323 44 6777776443 68888654
No 227
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=83.41 E-value=18 Score=30.04 Aligned_cols=59 Identities=20% Similarity=0.138 Sum_probs=34.0
Q ss_pred CCEEEEEeecccEEEEEECCCC---ceeecccCCCCcccceeEEe-----------eCCeEEEEEeecCCCCCceeEEEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKH---VWSEVQTLRPPGVMFSFLIA-----------SPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~---~W~~i~~~~~~~~~~~~~~~-----------~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
++++|+|-|. ..+.||..+. .|...+.+ + ....+++.. .++.+|++-| ..-|+|
T Consensus 126 ~gk~yfFkG~--~ywr~d~~~~P~~i~~~~~g~-p-~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg--------~~y~r~ 193 (219)
T 1hxn_A 126 SSRLHIMAGR--RLWWLDLKSGAQATWTELPWP-H-EKVDGALCMEKPLGPNSCSTSGPNLYLIHG--------PNLYCY 193 (219)
T ss_dssp CCEEEEEETT--EEEEEEGGGGGGCCCEEECCS-C-SCCSEEEEESSCSSSCCSCSSSCEEEEEET--------TEEEEE
T ss_pred CCEEEEEeCC--EEEEEeCCCCceEhhhcCCCC-C-CCcCEEEEccccccccceeccCCeEEEEEC--------CEEEEE
Confidence 6899999884 6799997653 22222221 1 122233331 3567888864 357788
Q ss_pred ecCcc
Q 016239 290 DELSM 294 (392)
Q Consensus 290 d~~~~ 294 (392)
|..+.
T Consensus 194 ~~~~~ 198 (219)
T 1hxn_A 194 RHVDK 198 (219)
T ss_dssp SSHHH
T ss_pred eCCce
Confidence 76543
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=83.38 E-value=20 Score=30.91 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=18.8
Q ss_pred CCEEEEEeecccEEEEEECCCCceeeccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQT 252 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~ 252 (392)
+|.||+..+ +.|.+||+..+....+..
T Consensus 249 ~G~lwv~~~--~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 249 GGWLWSSSG--TGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp TSCEEECCS--SEEEEECTTSCEEEEEEC
T ss_pred CCCEEEecC--CcEEEECCCCCEEEEEEC
Confidence 578877663 469999997666555543
No 229
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=82.92 E-value=34 Score=33.55 Aligned_cols=51 Identities=16% Similarity=0.141 Sum_probs=31.4
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCc
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~ 246 (392)
.+.+||..+.+-... +... ... ...+.+ ++.+.+.|+.++.|..+|+.+.+
T Consensus 542 ~v~vwd~~~~~~~~~--~~~h-~~~-----v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 542 TVKVWNLSNCKLRST--LAGH-TGY-----VSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp CEEEEETTTCCEEEE--ECCC-SSC-----EEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred eEEEEECCCCcEEEE--EcCC-CCC-----EEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 588888876543221 1111 110 222333 67888889988999999998775
No 230
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=82.62 E-value=24 Score=30.72 Aligned_cols=49 Identities=10% Similarity=0.286 Sum_probs=28.2
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecc-----cEEEEEECCCC
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYS-----FSVSSFDLKKH 245 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~-----~~i~~yd~~~~ 245 (392)
.+.+||..+++-...-..+.. ...+.+ ++..++.++.. +.|..||..+.
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSPVP---------VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp EEEEEETTTCCEEEEEECSSC---------EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred eEEEEECCCCcEEEEeecCCC---------eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 688888877654332221111 122222 56666666665 78888888655
No 231
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=82.60 E-value=18 Score=29.32 Aligned_cols=62 Identities=16% Similarity=0.152 Sum_probs=38.6
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-----cc-cCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-----VQ-TLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-----i~-~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+|++|+|-| +..++||..+++-.. +. ..+..+....++...+|.+|++-| ...|+||..+..
T Consensus 109 ~g~~yfFkg--~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffkg--------~~y~~~~~~~~~ 176 (195)
T 1itv_A 109 RGKMLLFSG--RRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQD--------RFYWRVSSRSEL 176 (195)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECGGGCEEHHHHSTTSCSSCSEEEEETTEEEEEET--------TEEEEEECCTTC
T ss_pred CCeEEEEeC--CEEEEEeCCcccccCCCccChhhcCCCCCCCCCEEEEeCCeEEEEeC--------CEEEEEECCccE
Confidence 689999977 478999987754221 11 111111223334556799999864 367888876654
No 232
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.18 E-value=29 Score=31.38 Aligned_cols=94 Identities=9% Similarity=-0.076 Sum_probs=52.1
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA 265 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~ 265 (392)
.+..+++.....+.+..-. .. ..+.+.. ++.||+..-..+.|+++++.....+.+...........++-.
T Consensus 97 ~I~~i~~~~~~~~~~~~~~---~~-----~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~ 168 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNNL---EN-----AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDW 168 (386)
T ss_dssp CEEEECTTSCCCEEEECSC---SC-----EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEET
T ss_pred cceeeccCCCcEEEEecCC---Cc-----cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEe
Confidence 4667777665555443211 11 1333333 589999987778999999987765554222111111122112
Q ss_pred eCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 266 SPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 266 ~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
.++.||+.... ...|++++.+...
T Consensus 169 ~~g~lY~~d~~------~~~I~~~~~dg~~ 192 (386)
T 3v65_B 169 VHDKLYWTDSG------TSRIEVANLDGAH 192 (386)
T ss_dssp TTTEEEEEETT------TTEEEECBTTSCS
T ss_pred CCCeEEEEcCC------CCeEEEEeCCCCc
Confidence 47899987632 2356666766543
No 233
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=81.69 E-value=21 Score=32.42 Aligned_cols=66 Identities=14% Similarity=0.056 Sum_probs=39.6
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
++.+++.|+. ...+.+||..+.+-...-..+.. ... ..++.+ ++.+.+.|+.++.|..||+
T Consensus 181 ~~~~l~~~~~-----------d~~i~iwd~~~~~~~~~~~~~~h-~~~-----v~~~~~s~~~~~l~s~~~dg~i~iwd~ 243 (437)
T 3gre_A 181 EKSLLVALTN-----------LSRVIIFDIRTLERLQIIENSPR-HGA-----VSSICIDEECCVLILGTTRGIIDIWDI 243 (437)
T ss_dssp SCEEEEEEET-----------TSEEEEEETTTCCEEEEEECCGG-GCC-----EEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred CCCEEEEEeC-----------CCeEEEEeCCCCeeeEEEccCCC-CCc-----eEEEEECCCCCEEEEEcCCCeEEEEEc
Confidence 4667777664 22688999877553221111100 111 233333 6788888988899999999
Q ss_pred CCCce
Q 016239 243 KKHVW 247 (392)
Q Consensus 243 ~~~~W 247 (392)
.+.+.
T Consensus 244 ~~~~~ 248 (437)
T 3gre_A 244 RFNVL 248 (437)
T ss_dssp TTTEE
T ss_pred CCccE
Confidence 87654
No 234
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=81.53 E-value=21 Score=29.29 Aligned_cols=109 Identities=11% Similarity=0.068 Sum_probs=59.6
Q ss_pred CCEEEEEeecccEEEEEECCCCce---eeccc--CCCC-cccceeEEee-CCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVW---SEVQT--LRPP-GVMFSFLIAS-PNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W---~~i~~--~~~~-~~~~~~~~~~-~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
++++|+|-|. ..++|+-.+-.- +.|.. +|.. ....+++... ++++|++-| ...|+||..+++
T Consensus 79 ~~~iyfFkG~--~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~~- 147 (207)
T 1pex_A 79 HDLIFIFRGR--KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNHI- 147 (207)
T ss_dssp TTEEEEEETT--EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTTE-
T ss_pred CCcEEEEccC--EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCcc-
Confidence 5999999874 678887432111 11222 1111 1222332222 589999874 367999987543
Q ss_pred EecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCc
Q 016239 297 SEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 297 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
....-|..+...|-+... ..-+++..++++|++-|.. ++++|..+.+
T Consensus 148 -~d~gyPr~i~~~~~Gip~----~iDaAf~~~g~~YfFkg~~-------y~rf~~~~~~ 194 (207)
T 1pex_A 148 -MDKDYPRLIEEDFPGIGD----KVDAVYEKNGYIYFFNGPI-------QFEYSIWSNR 194 (207)
T ss_dssp -ECSSCCCBHHHHSTTSCS----CCSEEEEETTEEEEEETTE-------EEEEETTTTE
T ss_pred -ccCCCCccHHHcCCCCCC----CccEEEEcCCcEEEEECCE-------EEEEeCCccE
Confidence 233455555444544421 1234445689999998742 3455655544
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=81.48 E-value=23 Score=29.75 Aligned_cols=186 Identities=6% Similarity=-0.148 Sum_probs=93.6
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC----cceEecCCcCceeecCCC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP----RFGFSRILNTSWHLTSPL 135 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg----~~~ynp~~~~~W~~~~~~ 135 (392)
++.+|+.... ...+..+++....-..+.... ......++.. ++.||+... +.++|+. ...-+.+...
T Consensus 47 ~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~-~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~-g~~~~~~~~~ 119 (267)
T 1npe_A 47 DKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQD-LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD-GTQRRVLFDT 119 (267)
T ss_dssp TTEEEEEETT-----TTEEEEEESSSCCCEEEECTT-CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECS
T ss_pred CCEEEEEECC-----CCEEEEEecCCCCcEEEEECC-CCCccEEEEEecCCeEEEEECCCCEEEEEEcC-CCCEEEEEEC
Confidence 5567765332 256888888765432221110 0122345543 678998743 3677765 3322222111
Q ss_pred CcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCc
Q 016239 136 RFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSS 215 (392)
Q Consensus 136 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 215 (392)
. -.......+ +. +++++|+.... .....++++++....-+.+..... ..
T Consensus 120 ~--~~~P~~i~v-d~-------------~~g~lyv~~~~---------~~~~~I~~~~~dg~~~~~~~~~~~--~~---- 168 (267)
T 1npe_A 120 G--LVNPRGIVT-DP-------------VRGNLYWTDWN---------RDNPKIETSHMDGTNRRILAQDNL--GL---- 168 (267)
T ss_dssp S--CSSEEEEEE-ET-------------TTTEEEEEECC---------SSSCEEEEEETTSCCCEEEECTTC--SC----
T ss_pred C--CCCccEEEE-ee-------------CCCEEEEEECC---------CCCcEEEEEecCCCCcEEEEECCC--CC----
Confidence 1 011112222 11 16789987432 012367777765433222211111 11
Q ss_pred cceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 216 QYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 216 ~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
..+.+.. ++.||+.....+.|.+||+....-..+.... .....++..++.||+.... ...|+++|+.+
T Consensus 169 -P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~---~~P~gi~~d~~~lyva~~~------~~~v~~~d~~~ 238 (267)
T 1npe_A 169 -PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL---QYPFAVTSYGKNLYYTDWK------TNSVIAMDLAI 238 (267)
T ss_dssp -EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC---CSEEEEEEETTEEEEEETT------TTEEEEEETTT
T ss_pred -CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC---CCceEEEEeCCEEEEEECC------CCeEEEEeCCC
Confidence 1333333 4689999877789999999764322222111 1112345568899987532 34677888875
Q ss_pred cc
Q 016239 294 ME 295 (392)
Q Consensus 294 ~~ 295 (392)
.+
T Consensus 239 g~ 240 (267)
T 1npe_A 239 SK 240 (267)
T ss_dssp TE
T ss_pred CC
Confidence 54
No 236
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=81.27 E-value=43 Score=32.85 Aligned_cols=122 Identities=7% Similarity=0.042 Sum_probs=61.4
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECCEEEEEeec----------
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIY---------- 233 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~---------- 233 (392)
+++.+++.... .+....++.++|..++.......++.. .. ...+. -+|+.++++..
T Consensus 131 DG~~la~~~~~------~G~~~~~i~v~dl~tg~~~~~~~~~~~-~~------~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 131 DGKKVAFAQKP------NAADEAVLHVIDVDSGEWSKVDVIEGG-KY------ATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp TSSEEEEEEEE------TTCSCCEEEEEETTTCCBCSSCCBSCC-TT------CCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEECC------CCCceEEEEEEECCCCCCcCCcccCcc-cc------cceEEecCCCEEEEEEecCCCCCcccc
Confidence 55655554331 122345799999998876411111111 11 12222 25655555433
Q ss_pred ---ccEEEEEECCCCcee--ecccCCCC-cccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 234 ---SFSVSSFDLKKHVWS--EVQTLRPP-GVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 234 ---~~~i~~yd~~~~~W~--~i~~~~~~-~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
...|+.+++.+.+-+ .+-..+.. .........-+|+.+++...... ...++|.+|..+..|+.+..
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeec
Confidence 235999999877633 22222211 11222223446665555443321 25788888876677777654
No 237
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=81.18 E-value=38 Score=32.20 Aligned_cols=89 Identities=6% Similarity=-0.032 Sum_probs=49.8
Q ss_pred eEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECCEEEEEeeccc--EEEEEECCCCceeecccCCCCcccceeE
Q 016239 187 LAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIYSF--SVSSFDLKKHVWSEVQTLRPPGVMFSFL 263 (392)
Q Consensus 187 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~--~i~~yd~~~~~W~~i~~~~~~~~~~~~~ 263 (392)
.+++++|..++.++.+..-... ....+. -+|+..+.+...+ .|+.+|+.+++...+.. ..... ....
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~--------~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~-~~~~ 244 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGS--------FSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLEL-PSKDF-SSYR 244 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCE--------EEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCC-SCSHH-HHHC
T ss_pred eEEEEEcCCCCCceEeecCCCc--------cccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccC-CCcCh-hhhh
Confidence 4699999988888876432211 012222 2565444555555 89999999887762221 11111 1111
Q ss_pred --------EeeCCeEEEEEeecCCCCCceeEEEe
Q 016239 264 --------IASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 264 --------~~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
..-+|++++.+..+. ...+|.+
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g----~~~l~~~ 274 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREG----RSAVFID 274 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETT----EEEEEET
T ss_pred hccccceeEcCCCcEEEEEEcCC----cEEEEEE
Confidence 344777777665433 5777754
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=81.02 E-value=14 Score=31.90 Aligned_cols=85 Identities=9% Similarity=0.107 Sum_probs=43.6
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCC-CCCeecCCCCCCCCCCCCCccceeeEEE-CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPH-SDSWELCPPLPADFRSGYSSQYLSSALF-RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~i~~yd~ 242 (392)
++.+|+.... ..+..||+. ...|+...+.+. . .+.+.. +|.+|+ |...+.|+.||+
T Consensus 107 ~~~l~v~t~~------------~~l~~~d~~g~~~~~~~~~~~~---~------~~~~~~~~g~l~v-gt~~~~l~~~d~ 164 (330)
T 3hxj_A 107 EDILYVTSMD------------GHLYAINTDGTEKWRFKTKKAI---Y------ATPIVSEDGTIYV-GSNDNYLYAINP 164 (330)
T ss_dssp TTEEEEECTT------------SEEEEECTTSCEEEEEECSSCC---C------SCCEECTTSCEEE-ECTTSEEEEECT
T ss_pred CCEEEEEecC------------CEEEEEcCCCCEEEEEcCCCce---e------eeeEEcCCCEEEE-EcCCCEEEEECC
Confidence 6777775321 157788876 334665432111 1 233334 677766 444578999999
Q ss_pred CCC-ceeecccCCCCcccceeEEeeCCeEEEEE
Q 016239 243 KKH-VWSEVQTLRPPGVMFSFLIASPNMLVLAG 274 (392)
Q Consensus 243 ~~~-~W~~i~~~~~~~~~~~~~~~~~g~l~v~g 274 (392)
... .|..-... ......+...++.||+..
T Consensus 165 ~g~~~~~~~~~~---~~~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 165 DGTEKWRFKTND---AITSAASIGKDGTIYFGS 194 (330)
T ss_dssp TSCEEEEEECSS---CCCSCCEECTTCCEEEES
T ss_pred CCCEeEEEecCC---CceeeeEEcCCCEEEEEe
Confidence 722 35443211 111122222467777643
No 239
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=80.70 E-value=33 Score=31.16 Aligned_cols=104 Identities=10% Similarity=-0.052 Sum_probs=58.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecC-C-CCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELC-P-PLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSF 240 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~-~-~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~y 240 (392)
++.||+.-.. ....+++++.....=+.+ . .+..+ .+.++- ++.||+.-...+.|+++
T Consensus 213 ~g~ly~td~~----------~~~~I~~~~~dG~~~~~~~~~~l~~P---------~glavd~~~~~lY~aD~~~~~I~~~ 273 (400)
T 3p5b_L 213 HGFMYWTDWG----------TPAKIKKGGLNGVDIYSLVTENIQWP---------NGITLDLLSGRLYWVDSKLHSISSI 273 (400)
T ss_dssp TTEEEEEECS----------SSCCEEEEETTSCSCEEEECSSCSCE---------EEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCeEEEEeCC----------CCCEEEEEeCCCCccEEEEECCCCce---------EEEEEEeCCCEEEEEECCCCEEEEE
Confidence 6788887411 112578887754332222 1 11111 334443 68999998777899999
Q ss_pred ECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 241 DLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 241 d~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
|.....-..+...........++++.++.||+.... ...|+++|..+
T Consensus 274 d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~------~~~V~~~~~~~ 320 (400)
T 3p5b_L 274 DVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII------NEAIFSANRLT 320 (400)
T ss_dssp ETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESS------SCSEEEEESSS
T ss_pred eCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCC------CCeEEEEEcCC
Confidence 986543333322211111223456688999998732 34566777433
No 240
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=80.28 E-value=45 Score=33.07 Aligned_cols=100 Identities=9% Similarity=-0.072 Sum_probs=58.3
Q ss_pred ceEEEEEeCCCC--C-eecCCCCCCCCCCCCCccceeeEEECCEEEEEeec---ccEEEEEECCC--CceeecccCCCCc
Q 016239 186 RLAVEIYDPHSD--S-WELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIY---SFSVSSFDLKK--HVWSEVQTLRPPG 257 (392)
Q Consensus 186 ~~~~~~yd~~~~--~-W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~---~~~i~~yd~~~--~~W~~i~~~~~~~ 257 (392)
...++++|..+. . |+.+..-... .. ......++.||+.... ...|+.+|+.+ ..|+.+-+.....
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~-~~------~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~ 365 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKA-QW------DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN 365 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSS-CE------EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE
T ss_pred cceEEEEECCCCCCcccEEecCCCCc-eE------EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe
Confidence 347888888776 6 7776532111 11 1222356678777532 35799999987 5788775332211
Q ss_pred ccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 258 VMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 258 ~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
...+...+++|++....+. ...+|.+|..+..-..
T Consensus 366 --l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~~~~ 400 (741)
T 1yr2_A 366 --LESVGIAGNRLFASYIHDA----KSQVLAFDLDGKPAGA 400 (741)
T ss_dssp --EEEEEEEBTEEEEEEEETT----EEEEEEEETTSCEEEE
T ss_pred --EEEEEEECCEEEEEEEECC----EEEEEEEeCCCCceee
Confidence 1223344888887765433 5778888865543333
No 241
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=80.25 E-value=23 Score=29.01 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=38.3
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-----cc-cCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-----VQ-TLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-----i~-~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+|++|+|-| +..++||..+++-.. +. ..+.......++...+|++|++-| ...|+||..+++
T Consensus 127 ~gk~yfFkG--~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~iDaAf~~~g~~YfFkg--------~~y~rf~~~~~~ 194 (207)
T 1pex_A 127 TGKTLLFSG--NQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNG--------PIQFEYSIWSNR 194 (207)
T ss_dssp TSEEEEEET--TEEEEEETTTTEECSSCCCBHHHHSTTSCSCCSEEEEETTEEEEEET--------TEEEEEETTTTE
T ss_pred CCEEEEEeC--CEEEEEeCcCccccCCCCccHHHcCCCCCCCccEEEEcCCcEEEEEC--------CEEEEEeCCccE
Confidence 489999987 478999987653221 11 111111122333456999999864 367888887654
No 242
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=79.98 E-value=29 Score=30.08 Aligned_cols=96 Identities=13% Similarity=0.109 Sum_probs=51.4
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE----CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeE
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF----RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFL 263 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~----~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~ 263 (392)
.+.+||..++.-........+ ...+.+ ++.+++.++.++.|..||+.+.+-...-..+ . ....+
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~-~~~~~ 176 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAP---------VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP--E-RCYCA 176 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSC---------EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS--S-CEEEE
T ss_pred cEEEEEcCCCCceeeccccCc---------eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC--C-CceEE
Confidence 688899887765443221111 222332 6778888888899999999876422221111 1 12222
Q ss_pred EeeCCeEEEEEeecCCCCCceeEEEeecCccceEecc
Q 016239 264 IASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 264 ~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~ 300 (392)
......+++ +..+. .+.+|.++.....+..+.
T Consensus 177 ~~~~~~~~~-~~~~~----~i~~~~~~~~~~~~~~~~ 208 (368)
T 3mmy_A 177 DVIYPMAVV-ATAER----GLIVYQLENQPSEFRRIE 208 (368)
T ss_dssp EEETTEEEE-EEGGG----CEEEEECSSSCEEEEECC
T ss_pred EecCCeeEE-EeCCC----cEEEEEeccccchhhhcc
Confidence 333444444 43222 577776555444455443
No 243
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=79.89 E-value=25 Score=29.22 Aligned_cols=110 Identities=10% Similarity=-0.033 Sum_probs=56.4
Q ss_pred ECCEEEEEeecccEEEEEECCC----Cceee----cc----cCCCC-c-ccceeEEe--eCCeEEEEEeecCCCCCceeE
Q 016239 223 FRGRFYVFGIYSFSVSSFDLKK----HVWSE----VQ----TLRPP-G-VMFSFLIA--SPNMLVLAGMCNAPRGPSFNL 286 (392)
Q Consensus 223 ~~g~ly~~gg~~~~i~~yd~~~----~~W~~----i~----~~~~~-~-~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v 286 (392)
.+|++|+|-| +..++||..+ +.... |. .+|.. . ....++.. .++++|++-| ...
T Consensus 69 ~~g~~~fFkg--~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG--------~~y 138 (225)
T 3oyo_A 69 EASEAYVFSG--NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG--------NKY 138 (225)
T ss_dssp STTEEEEEET--TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET--------TEE
T ss_pred CCCeEEEEcC--CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC--------CeE
Confidence 4899999987 4788997632 22111 11 11110 0 01222233 3799999874 368
Q ss_pred EEeecCccceEecccCCHHHHHhhcCCcc-cCccceeEEEE--eCCEEEEEeccccCCCCeEEEEeecC
Q 016239 287 WKVDELSMEFSEIAIMPHDFLYSLVDTEE-DDKFASLKCVG--LGNLIYVFNEEYHKKYPACVCEIGTE 352 (392)
Q Consensus 287 ~~~d~~~~~W~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~--~~~~i~v~gg~~~~~~~~~~~~~d~~ 352 (392)
|+||..+.+-.. . |..+...|-+... ..+...-+++. .++++|++-|.. ++.+|..
T Consensus 139 w~~d~~~~~~~~--g-Pk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~~-------ywr~d~~ 197 (225)
T 3oyo_A 139 VRIAYDSKQLVG--N-IRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQN-------YVRIDFT 197 (225)
T ss_dssp EEEETTTTEEEE--E-EEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETTE-------EEEEECC
T ss_pred EEEECCCCeecC--C-CcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECCE-------EEEEeCC
Confidence 999976655433 1 3333322322200 00011223333 478999998742 2556665
No 244
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=79.83 E-value=23 Score=28.72 Aligned_cols=110 Identities=12% Similarity=0.049 Sum_probs=56.9
Q ss_pred ECCEEEEEeecccEEEEEECCCCce---eecccCC--CCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 223 FRGRFYVFGIYSFSVSSFDLKKHVW---SEVQTLR--PPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 223 ~~g~ly~~gg~~~~i~~yd~~~~~W---~~i~~~~--~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
.+|++|+|-| +..++||..+... +.|...- .+.....+++.. ++++|++-| ...|+||..+++
T Consensus 60 ~~g~~yfFkg--~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG--------~~yw~yd~~~~~ 129 (196)
T 3c7x_A 60 KDGKFVFFKG--DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG--------NKYYRFNEELRA 129 (196)
T ss_dssp TTSCEEEEET--TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET--------TEEEEEETTTTE
T ss_pred CCCcEEEecC--CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC--------CEEEEEeCCccc
Confidence 4789999977 4688998643211 1222211 111112233333 689999864 357899986643
Q ss_pred eEecccCCHHHHHhhcCCcccCccceeEEEEeCC-EEEEEeccccCCCCeEEEEeecCCCc
Q 016239 296 FSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGN-LIYVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 296 W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
....-|..+. .|-+... .-..+....++ ++|++-|.. .+++|..+.+
T Consensus 130 --v~~gyPk~i~-~~~gip~---~idaAf~~~~~~~~YfFkg~~-------y~r~d~~~~~ 177 (196)
T 3c7x_A 130 --VDSEYPKNIK-VWEGIPE---SPRGSFMGSDEVFTYFYKGNK-------YWKFNNQKLK 177 (196)
T ss_dssp --ECTTCSEEGG-GSBTCCS---SCSEEEECTTSSEEEEEETTE-------EEEEETTTTE
T ss_pred --ccCCCCccHH-HCCCcCC---CcceeEEecCCCEEEEEECCE-------EEEEECCcce
Confidence 2233344333 2333321 11223333344 999998742 3566765544
No 245
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=79.51 E-value=35 Score=30.71 Aligned_cols=110 Identities=8% Similarity=-0.017 Sum_probs=59.9
Q ss_pred CCEEEEEeecccEEEEEECCCCc--e-eecccC--CCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV--W-SEVQTL--RPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~--W-~~i~~~--~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
+|++|+|-| +..++|+..+.. + +.|... |.......+++.. ++++|++-| ...|+||..+.+
T Consensus 236 ~g~~~fFkg--~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~~- 304 (365)
T 3ba0_A 236 RNQVFLFKD--DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQM- 304 (365)
T ss_dssp GTEEEEEET--TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTE-
T ss_pred CCEEEEEeC--CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcce-
Confidence 799999977 368888754321 1 122221 2111112223333 589999864 367999976543
Q ss_pred EecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCc
Q 016239 297 SEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 297 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
....-|..+...|-+... .-..++...++++|+|-|.. ++++|..+.+
T Consensus 305 -v~~gyPk~I~~~f~g~p~---~iDaA~~~~~g~~YfFkg~~-------ywr~d~~~~~ 352 (365)
T 3ba0_A 305 -MDPGYPKLITKNFQGIGP---KIDAVFYSKNKYYYFFQGSN-------QFEYDFLLQR 352 (365)
T ss_dssp -ECSSCCCCHHHHSTTCCS---SCSEEEEETTTEEEEEETTE-------EEEEETTTTE
T ss_pred -ecCCCCcchhhcCCCCCC---ccceeeEecCCcEEEEeCCE-------EEEEECCccE
Confidence 233455555444444321 11233333388999998732 3566766655
No 246
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=79.27 E-value=14 Score=30.83 Aligned_cols=65 Identities=12% Similarity=0.013 Sum_probs=37.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC------CCCCCCCCCCCccceeeEEE---CCEEEEEeeccc
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP------PLPADFRSGYSSQYLSSALF---RGRFYVFGIYSF 235 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~------~~~~~~~~~~~~~~~~~~~~---~g~ly~~gg~~~ 235 (392)
++++|.+-|. ..++||..+++-..-- .+|.....+.. ....+|.. +|++|+|-|.
T Consensus 129 ~~k~yfFkG~-------------~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p-~~iDAA~~~~~~g~~YfFkg~-- 192 (227)
T 3lp9_A 129 GKEVYLFKGD-------------QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFE-SGADAAFASHKTNEVYFFKDD-- 192 (227)
T ss_dssp TTEEEEEETT-------------EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGG-GCCSEEEECSSTTEEEEEETT--
T ss_pred CCEEEEEECC-------------EEEEEeCCCccccCCCCeEHHHCCCCccccccC-CCccEEEEcCCCceEEEEECC--
Confidence 6899999886 5889987654322110 11110000000 01223333 5899999874
Q ss_pred EEEEEECCCC
Q 016239 236 SVSSFDLKKH 245 (392)
Q Consensus 236 ~i~~yd~~~~ 245 (392)
.-++||..++
T Consensus 193 ~Ywr~d~~~~ 202 (227)
T 3lp9_A 193 HYARVKVTPX 202 (227)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEECCcc
Confidence 6899998776
No 247
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=79.27 E-value=31 Score=30.01 Aligned_cols=95 Identities=6% Similarity=0.022 Sum_probs=49.2
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeec-------ccEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIY-------SFSV 237 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~-------~~~i 237 (392)
++.+|+.... ...+.+||+.+++....-..+.. ... ..+.+...+.+|...|. ...|
T Consensus 207 ~g~l~v~d~~-----------~~~I~~~~~~~G~~~~~~~~~~~-~~~----~~~~~~~pg~~~~~~g~~~v~~~~~~~v 270 (329)
T 3fvz_A 207 LDQLCVADRE-----------NGRIQCFKTDTKEFVREIKHASF-GRN----VFAISYIPGFLFAVNGKPYFGDQEPVQG 270 (329)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTTCCEEEEECCTTT-TTC----EEEEEEETTEEEEEECCCCTTCSCCCCE
T ss_pred CCEEEEEECC-----------CCEEEEEECCCCcEEEEEecccc-CCC----cceeeecCCEEEEeCCCEEeccCCCcEE
Confidence 4899998643 22689999886655332111110 000 12233333555555443 3489
Q ss_pred EEEECCCCceeeccc-CCCCcccceeEE-eeCCeEEEEEe
Q 016239 238 SSFDLKKHVWSEVQT-LRPPGVMFSFLI-ASPNMLVLAGM 275 (392)
Q Consensus 238 ~~yd~~~~~W~~i~~-~~~~~~~~~~~~-~~~g~l~v~gg 275 (392)
..+|..+.+....-. ..........++ .-+|.||+...
T Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~ 310 (329)
T 3fvz_A 271 FVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA 310 (329)
T ss_dssp EEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES
T ss_pred EEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC
Confidence 999988876554321 111111122233 34778998874
No 248
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=79.17 E-value=50 Score=32.25 Aligned_cols=108 Identities=8% Similarity=-0.032 Sum_probs=53.1
Q ss_pred ceEEEEEeCCCC-CeecCCCCCCC-CCCCCCccceeeEE-E--CCEEEEEeecc--cEEEEEECCCCceeecccCCCCcc
Q 016239 186 RLAVEIYDPHSD-SWELCPPLPAD-FRSGYSSQYLSSAL-F--RGRFYVFGIYS--FSVSSFDLKKHVWSEVQTLRPPGV 258 (392)
Q Consensus 186 ~~~~~~yd~~~~-~W~~~~~~~~~-~~~~~~~~~~~~~~-~--~g~ly~~gg~~--~~i~~yd~~~~~W~~i~~~~~~~~ 258 (392)
...+.++|..++ ..+.+...... .... ....+. - +|++++.+... ..|+.+|...+....+..... ..
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~~~~~~----~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~-~v 357 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDKHYVEP----LHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEW-EV 357 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECSSCCCC----CSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSS-CE
T ss_pred eeEEEEEECCCCceeeEEEEccCCCeECc----cCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCe-EE
Confidence 457889998887 56554311110 0000 011222 2 67766655443 368888876666665533211 11
Q ss_pred cceeEEeeCC-eEEEEEeecCCCCCceeEEEeecCccceEecc
Q 016239 259 MFSFLIASPN-MLVLAGMCNAPRGPSFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 259 ~~~~~~~~~g-~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~ 300 (392)
.......-+| .|++.+... ......||.+|..+...+.+.
T Consensus 358 ~~~~~~spdg~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEA--SPLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp EEEEEECTTSSEEEEEESSS--CTTCBEEEEEETTCCCCEESC
T ss_pred EeeeEEcCCCCEEEEEecCC--CCceEEEEEEEcCCCCceecc
Confidence 1101122245 455554321 112468888888776655554
No 249
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=78.10 E-value=26 Score=28.37 Aligned_cols=109 Identities=9% Similarity=0.098 Sum_probs=60.5
Q ss_pred CCEEEEEeecccEEEEEECCCCce-eecccC--CC-CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVW-SEVQTL--RP-PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W-~~i~~~--~~-~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
++++|+|-|. ..++|+..+..- +.|... |. .....+++...++++|++-| ...|+||..+++ ..
T Consensus 64 ~~~~yfFkG~--~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~~--~~ 131 (195)
T 1itv_A 64 SKKLFFFSGR--QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQM--VD 131 (195)
T ss_dssp TCCEEEEETT--EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTTE--EC
T ss_pred CCeEEEEeCC--EEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCccc--cc
Confidence 6899999874 678888542110 112111 11 11233444444789999864 367999987653 22
Q ss_pred ccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCc
Q 016239 300 AIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 300 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
..-|..+...|-+... ..-++...++.+|++-|.. ++++|..+.+
T Consensus 132 ~gyPr~i~~~w~Gvp~----~idaa~~~~g~~Yffkg~~-------y~~~~~~~~~ 176 (195)
T 1itv_A 132 PRSASEVDRMFPGVPL----DTHDVFQFREKAYFCQDRF-------YWRVSSRSEL 176 (195)
T ss_dssp GGGCEEHHHHSTTSCS----SCSEEEEETTEEEEEETTE-------EEEEECCTTC
T ss_pred CCCccChhhcCCCCCC----CCCEEEEeCCeEEEEeCCE-------EEEEECCccE
Confidence 2345444444544421 1334555579999998742 3566655544
No 250
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=77.97 E-value=58 Score=32.39 Aligned_cols=91 Identities=16% Similarity=0.265 Sum_probs=47.4
Q ss_pred CCCeecCCCCCCCCCCCCCccceeeE-EECCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEee---CCeEE
Q 016239 196 SDSWELCPPLPADFRSGYSSQYLSSA-LFRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS---PNMLV 271 (392)
Q Consensus 196 ~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~---~g~l~ 271 (392)
-.+|+.+...|.. .. .... .-++.+|+.+ .+.|+.=.=.-++|+.+.....+. ....+... ++.||
T Consensus 555 G~tW~~~~~~~~~-~~------i~~~~~~~~~~~a~~--~g~v~~S~DgG~tW~~~~~~~~p~-~~~~i~~~~~~~g~l~ 624 (737)
T 2cn3_A 555 GNSWKVCTNLGMG-AV------VASDRVNGKKFYAFY--NGKFYISTDGGLTFTDTKAPQLPK-SVNKIKAVPGKEGHVW 624 (737)
T ss_dssp TSSCEECBTCCTT-CE------EEECSSCTTCEEEEE--TTEEEEESSTTSBCEECCCSSCCS-CCSEEEEETTEEEEEE
T ss_pred CCCCccCCCCCCC-ce------EEEEecCCCEEEEec--CCEEEEECCCCcCcccccCCCCCC-ccceEEEEeCCCCEEE
Confidence 4689998754432 10 1111 1245677665 344444322346899874211111 11222332 57888
Q ss_pred EEEeecCCCCCceeEEEeecCccceEecccCC
Q 016239 272 LAGMCNAPRGPSFNLWKVDELSMEFSEIAIMP 303 (392)
Q Consensus 272 v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p 303 (392)
+.+.. ..||+-+-...+|+++..++
T Consensus 625 ~~~~~-------g~l~~S~D~G~tW~~~~~~~ 649 (737)
T 2cn3_A 625 LAARE-------GGLWRSTDGGYTFEKLSNVD 649 (737)
T ss_dssp EECBT-------TCEEEESSTTSSCEECTTCS
T ss_pred EEeCC-------CcEEEEeCCCcccEECcCCC
Confidence 87631 24676666678999986543
No 251
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=77.96 E-value=32 Score=29.31 Aligned_cols=102 Identities=5% Similarity=-0.029 Sum_probs=54.0
Q ss_pred EEEEEeCCCCCeecCCCCCC--CCCCCCCccceeeEEE-C-CEEEEEeecccEEEEEECCCCceeec-ccCCC-C--ccc
Q 016239 188 AVEIYDPHSDSWELCPPLPA--DFRSGYSSQYLSSALF-R-GRFYVFGIYSFSVSSFDLKKHVWSEV-QTLRP-P--GVM 259 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~--~~~~~~~~~~~~~~~~-~-g~ly~~gg~~~~i~~yd~~~~~W~~i-~~~~~-~--~~~ 259 (392)
.+.+||+.+++++.+.. +. ..... ....+.. + |.+|+.+.. +.|..||+. ++...+ ..... . ..-
T Consensus 47 ~i~~~d~~~g~~~~~~~-~~~~~~~~~----~~~i~~~~~~g~l~v~~~~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICK-PEVNGYGGI----PAGCQCDRDANQLFVADMR-LGLLVVQTD-GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp EEEEECTTTCCEEEEEC-CEETTEECC----EEEEEECSSSSEEEEEETT-TEEEEEETT-SCEEECCSBCTTSCBCBCC
T ss_pred EEEEEeCCCCcEEEEEe-cccCCCCCC----CceEEEecCCCcEEEEECC-CCEEEEeCC-CCEEEEEeccCCCccccCC
Confidence 68899988888765532 10 00010 1222222 4 788887643 479999998 776655 32211 1 111
Q ss_pred ceeEEeeCCeEEEEEeec---------CCCCCceeEEEeecCccceE
Q 016239 260 FSFLIASPNMLVLAGMCN---------APRGPSFNLWKVDELSMEFS 297 (392)
Q Consensus 260 ~~~~~~~~g~l~v~gg~~---------~~~~~~~~v~~~d~~~~~W~ 297 (392)
....+..+|+||+..... ........||++|+. .+..
T Consensus 120 ~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 120 NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence 222233478888876322 111123678888876 4443
No 252
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=77.31 E-value=34 Score=29.40 Aligned_cols=62 Identities=8% Similarity=0.037 Sum_probs=36.8
Q ss_pred CCE-EEEEeecccEEEEEEC-CCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecC
Q 016239 224 RGR-FYVFGIYSFSVSSFDL-KKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDEL 292 (392)
Q Consensus 224 ~g~-ly~~gg~~~~i~~yd~-~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~ 292 (392)
++. +++.|+..+.|..||+ .+++...+..... ......+....+.+++.++.+. .+.+| |..
T Consensus 67 ~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~l~s~~~d~----~i~iw--d~~ 130 (342)
T 1yfq_A 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEA-NLGICRICKYGDDKLIAASWDG----LIEVI--DPR 130 (342)
T ss_dssp SSSEEEEEEETTSCEEEECSSSSSSEEECBSCCC-CSCEEEEEEETTTEEEEEETTS----EEEEE--CHH
T ss_pred CCCcEEEEEcCCCeEEEEEeccCCceEeccccCC-CCceEEEEeCCCCEEEEEcCCC----eEEEE--ccc
Confidence 678 7888888899999999 8887655543111 1111222222266666665432 57777 544
No 253
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=77.25 E-value=31 Score=29.94 Aligned_cols=63 Identities=10% Similarity=-0.017 Sum_probs=37.2
Q ss_pred CEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe-e-CCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA-S-PNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~-~-~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+.+++.|+..+.|..||+.+.+-... ..........+.. . ++.+++.|+.++ .+.+| |..+.+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg----~i~iw--d~~~~~ 149 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDH----ALRLW--NIQTDT 149 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETTS----CEEEE--ETTTTE
T ss_pred CCEEEEecCCCEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCC----eEEEE--EeecCe
Confidence 57888898889999999987643222 1111111122222 2 677777776443 67788 655443
No 254
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=76.74 E-value=35 Score=29.13 Aligned_cols=20 Identities=10% Similarity=0.210 Sum_probs=16.3
Q ss_pred EEEEEeecccEEEEEECCCC
Q 016239 226 RFYVFGIYSFSVSSFDLKKH 245 (392)
Q Consensus 226 ~ly~~gg~~~~i~~yd~~~~ 245 (392)
.+++.|+.++.|..||..+.
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEEEETTSCEEEEEEEEC
T ss_pred eEEEEEcCCCeEEEEeCCCC
Confidence 68888888888999988763
No 255
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=76.50 E-value=59 Score=31.73 Aligned_cols=62 Identities=15% Similarity=0.160 Sum_probs=36.4
Q ss_pred EEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 226 RFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 226 ~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
.+++.|+.++.|..||+.+.+-...-.... ..........++++++.|+.++ .+.+| |..+.
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~-~~v~~v~~spdg~~l~sg~~Dg----~i~iw--d~~~~ 593 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHT-GYVSTVAVSPDGSLCASGGKDG----VVLLW--DLAEG 593 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETTS----BCEEE--ETTTT
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcCCC-CCEEEEEEeCCCCEEEEEeCCC----eEEEE--ECCCC
Confidence 467778888899999998765433211111 1111222233778888776543 68888 65544
No 256
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=75.99 E-value=46 Score=30.64 Aligned_cols=62 Identities=16% Similarity=0.199 Sum_probs=34.7
Q ss_pred CCEEEEEeecccEEEEEECCCCce-eecccCCCCcccceeEEeeCC-eEEEEEeecCCCCCceeEEEeec
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVW-SEVQTLRPPGVMFSFLIASPN-MLVLAGMCNAPRGPSFNLWKVDE 291 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W-~~i~~~~~~~~~~~~~~~~~g-~l~v~gg~~~~~~~~~~v~~~d~ 291 (392)
+|.||+.....+.|++||+.+.+. ..+.............+..++ .||+.... ...|++++.
T Consensus 239 ~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~------~~~I~~~~~ 302 (433)
T 4hw6_A 239 NGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG------KHCIYRVDY 302 (433)
T ss_dssp TCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT------TTEEEEEEB
T ss_pred CCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC------CCEEEEEeC
Confidence 688999876677999999986655 333221111111222233345 48887632 235566543
No 257
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=75.97 E-value=10 Score=31.60 Aligned_cols=61 Identities=8% Similarity=-0.028 Sum_probs=36.5
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-----ccc-CCC-C-----cccceeEEe-eCCeEEEEEeecCCCCCceeEEEee
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-----VQT-LRP-P-----GVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-----i~~-~~~-~-----~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d 290 (392)
++++|+|-| +..++||..+++-.. +.. .|. . ....+++.. .++++|++-| ..-|+||
T Consensus 129 ~~k~yfFkG--~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--------~~Ywr~d 198 (227)
T 3lp9_A 129 GKEVYLFKG--DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--------DHYARVK 198 (227)
T ss_dssp TTEEEEEET--TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--------TEEEEEE
T ss_pred CCEEEEEEC--CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--------CEEEEEE
Confidence 689999988 478999987553221 110 111 0 112233222 3689999874 3678998
Q ss_pred cCcc
Q 016239 291 ELSM 294 (392)
Q Consensus 291 ~~~~ 294 (392)
..+.
T Consensus 199 ~~~~ 202 (227)
T 3lp9_A 199 VTPX 202 (227)
T ss_dssp CCSS
T ss_pred CCcc
Confidence 8765
No 258
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=74.83 E-value=48 Score=29.87 Aligned_cols=23 Identities=13% Similarity=0.034 Sum_probs=17.7
Q ss_pred CCEEEEEeecccEEEEEECCCCc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~ 246 (392)
++.+.+.|+.++.|..||..+.+
T Consensus 272 ~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 272 NSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp TEEEEEEESTTEEEEEEETTTTE
T ss_pred CccEEEEEcCCCcEEEEEcCCCc
Confidence 35577777777889999998765
No 259
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=74.37 E-value=44 Score=29.21 Aligned_cols=103 Identities=6% Similarity=-0.112 Sum_probs=56.4
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCC---eecCCCCCCCCCCCCCccceeeEE--ECCEEEEEeecccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDS---WELCPPLPADFRSGYSSQYLSSAL--FRGRFYVFGIYSFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~~~--~~g~ly~~gg~~~~i~~ 239 (392)
+++||+.-.. ...+.++++.... +.....+..+ .+.++ .++.||+.....+.|.+
T Consensus 46 ~~~lyw~D~~-----------~~~I~r~~~~g~~~~~~~~~~~l~~p---------~glavd~~~g~ly~~d~~~~~I~~ 105 (318)
T 3sov_A 46 HGLIYWSDVS-----------EEAIKRTEFNKTESVQNVVVSGLLSP---------DGLACDWLGEKLYWTDSETNRIEV 105 (318)
T ss_dssp GTEEEEEETT-----------TTEEEEEETTSSSCCCEEEEECCSCC---------CEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEECC-----------CCcEEEEEccCCCceEEEEcCCCCCc---------cEEEEEcCCCeEEEEECCCCEEEE
Confidence 6788888422 2257788776542 2111222222 23343 37899999777789999
Q ss_pred EECCCCceeecccCCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 240 FDLKKHVWSEVQTLRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 240 yd~~~~~W~~i~~~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
+|+....-+.+...... ....+++ .+|.||+..... ...|++++.+..
T Consensus 106 ~~~dG~~~~~l~~~~~~--~P~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~ 155 (318)
T 3sov_A 106 SNLDGSLRKVLFWQELD--QPRAIALDPSSGFMYWTDWGE-----VPKIERAGMDGS 155 (318)
T ss_dssp EETTSCSCEEEECSSCS--SEEEEEEEGGGTEEEEEECSS-----SCEEEEEETTSC
T ss_pred EECCCCcEEEEEeCCCC--CccEEEEeCCCCEEEEEecCC-----CCEEEEEEcCCC
Confidence 99875433333211111 1122333 368898875211 346777777654
No 260
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=73.99 E-value=70 Score=31.38 Aligned_cols=99 Identities=10% Similarity=0.046 Sum_probs=56.2
Q ss_pred eEEEEEeCCCC--CeecCCCCCCCCCCCCCccceeeEEECCEEEEEeec---ccEEEEEECCCC---ceeecccCCCCcc
Q 016239 187 LAVEIYDPHSD--SWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIY---SFSVSSFDLKKH---VWSEVQTLRPPGV 258 (392)
Q Consensus 187 ~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~---~~~i~~yd~~~~---~W~~i~~~~~~~~ 258 (392)
..++++|..+. .|+.+..-.. .. .......++.||+.... ...|+.+|+.+. .|+.+.+.....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~---~~----~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~- 330 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLD---AD----VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV- 330 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSS---SC----EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-
T ss_pred cEEEEEECCCCCCceEEEeCCCC---ce----EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-
Confidence 47888887665 6776643111 11 12233457889988654 368999998763 477654333221
Q ss_pred cceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 259 MFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 259 ~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
. .+...++.|++....+. ...|+.+|.++.....+
T Consensus 331 -~-~~s~~g~~lv~~~~~~g----~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 331 -L-TVHSGSGYLFAEYMVDA----TARVEQFDYEGKRVREV 365 (693)
T ss_dssp -E-EEEEETTEEEEEEEETT----EEEEEEECTTSCEEEEE
T ss_pred -E-EEEEECCEEEEEEEECC----eeEEEEEECCCCeeEEe
Confidence 1 33444666666544322 45677778776544443
No 261
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=73.96 E-value=46 Score=29.29 Aligned_cols=107 Identities=12% Similarity=-0.044 Sum_probs=55.9
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCCceeecccCCCCcccce-eEEee
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFS-FLIAS 266 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~-~~~~~ 266 (392)
.++++|..++.-+.+...+..... .....-+|+..++......|+.+|+.+.+-..+...+....... .+...
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~------~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 134 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTF------GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS 134 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSS------SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT
T ss_pred eEEEEeCCCCceEEeeeCCCCCcc------ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECC
Confidence 688899988877766543322010 11222256544454445689999999887655544333211111 12234
Q ss_pred CCeEEEEEeecCC----------------CCCceeEEEeecCccceEecc
Q 016239 267 PNMLVLAGMCNAP----------------RGPSFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 267 ~g~l~v~gg~~~~----------------~~~~~~v~~~d~~~~~W~~~~ 300 (392)
++++++.-..... ......||.+|..+.+-+.+.
T Consensus 135 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 184 (388)
T 3pe7_A 135 DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL 184 (388)
T ss_dssp TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE
T ss_pred CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee
Confidence 5665442211100 112367888898877655443
No 262
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=73.88 E-value=50 Score=29.64 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=56.2
Q ss_pred EEEEEeCCCCCeecCCCC---CCCC-CC-CCCccceeeEEE-----CCEEEEEeecccEEEEEECCCCceeecccC---C
Q 016239 188 AVEIYDPHSDSWELCPPL---PADF-RS-GYSSQYLSSALF-----RGRFYVFGIYSFSVSSFDLKKHVWSEVQTL---R 254 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~---~~~~-~~-~~~~~~~~~~~~-----~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~---~ 254 (392)
.+...+-...+|+.+... +... +. .........+.. .+.||+.+ ..+.|++.+-...+|+.+... +
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~-~~ggl~~S~DgG~tW~~~~~~~~~p 160 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT-SPQGLFRSTDHGASWEPVAGFNDHP 160 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEE-ETTEEEEESSTTSBCEECHHHHTCT
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEe-cCCcEEEEcCCCCCeEECcCccCCc
Confidence 466666667889988632 1110 00 000001112223 46777654 345788888888899987532 1
Q ss_pred C-------------CcccceeEEee---CCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 255 P-------------PGVMFSFLIAS---PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 255 ~-------------~~~~~~~~~~~---~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
. .......+... .+.||+... ...+|+.+....+|+.+..
T Consensus 161 ~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-------~ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 161 MRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-------SGGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp THHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-------TBEEEEESSTTSSCEECCT
T ss_pred cccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-------CCCEEEECCCCCCceECCC
Confidence 0 01112233332 356777543 1247777777788988753
No 263
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=72.95 E-value=47 Score=28.89 Aligned_cols=92 Identities=9% Similarity=-0.009 Sum_probs=49.9
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECCEEEEEeecccEEEEEECCCCcee--ecccCCCCcccceeEE
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIYSFSVSSFDLKKHVWS--EVQTLRPPGVMFSFLI 264 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~i~~yd~~~~~W~--~i~~~~~~~~~~~~~~ 264 (392)
.+.+||..+++-............ .+.+. -+|.+++.|+.++.|..||+.+.+-. .+.... ......+.
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i------~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h--~~~v~~l~ 221 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEY------SSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDE--EAKIKEVK 221 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCC------CEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCT--TSCEEEEE
T ss_pred cEEEEECCCCcEEEEEecCCCCce------EEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccC--CCCEEEEE
Confidence 588899877665332211111011 12222 26788888898899999999877533 221101 11111222
Q ss_pred -eeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 265 -ASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 265 -~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
..++..++.++ +. .+.+| |..+.
T Consensus 222 fs~~g~~l~s~~-~~----~v~iw--d~~~~ 245 (343)
T 3lrv_A 222 FADNGYWMVVEC-DQ----TVVCF--DLRKD 245 (343)
T ss_dssp ECTTSSEEEEEE-SS----BEEEE--ETTSS
T ss_pred EeCCCCEEEEEe-CC----eEEEE--EcCCC
Confidence 23677777665 22 68888 65443
No 264
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=72.06 E-value=56 Score=29.37 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=39.2
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-----ccc-CCCCcccceeEEee-CCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-----VQT-LRPPGVMFSFLIAS-PNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-----i~~-~~~~~~~~~~~~~~-~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
++++|+|-| +..++||..+++-.. |.. .+.......+++.. +|++|++-| ...|+||..+.+-
T Consensus 284 ~~~~yfFkG--~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg--------~~ywr~d~~~~~v 353 (365)
T 3ba0_A 284 FYRTYFFVD--NQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG--------SNQFEYDFLLQRI 353 (365)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET--------TEEEEEETTTTEE
T ss_pred CCEEEEEEC--CEEEEEeCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC--------CEEEEEECCccEE
Confidence 589999987 478999987654222 111 11111222333444 899998864 3688999877654
Q ss_pred E
Q 016239 297 S 297 (392)
Q Consensus 297 ~ 297 (392)
.
T Consensus 354 ~ 354 (365)
T 3ba0_A 354 T 354 (365)
T ss_dssp E
T ss_pred e
Confidence 3
No 265
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=71.58 E-value=41 Score=27.68 Aligned_cols=62 Identities=8% Similarity=0.028 Sum_probs=37.3
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-----cc-cCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-----VQ-TLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-----i~-~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+|++|+|-| +..++||..+++-.. +. ..+.......++... +|.+|++-| ...|+||..+..
T Consensus 135 ~g~~YfFkG--~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg--------~~y~~~~~~~~~ 204 (218)
T 1gen_A 135 NKKTYIFAG--DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG--------AYYLKLENQSLK 204 (218)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEET--------TEEEEEETTEEE
T ss_pred CCeEEEEEC--CEEEEEECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEEC--------CEEEEEECCcee
Confidence 689999987 478999987764221 11 111111122233444 489999864 367888876554
No 266
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=71.08 E-value=67 Score=29.89 Aligned_cols=234 Identities=10% Similarity=0.110 Sum_probs=0.0
Q ss_pred CCCCEEEEEcccCCCCCCCceeeeeCCCC----ceeeCC-------CCCCCCCcceEEeecceEEee----------cCc
Q 016239 60 SPRPWFFLFGLHNTSSRNNQSFAFDPASN----SWFHLP-------PAQEPRAGSCFIGANGFFFTT----------TPR 118 (392)
Q Consensus 60 ~~~~~l~~~gg~~~~~~~~~~~~yd~~~~----~W~~~~-------~~~~~r~~~~~~~~~g~i~v~----------gg~ 118 (392)
..+..+|+-+..+ +.++++|..++ +-.+.- ..-..+-+...+.-+| |||. |+.
T Consensus 93 ~~r~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Q ss_pred ceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCeEEEEe---------------------ceeec
Q 016239 119 FGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPKFIVVG---------------------GVRFI 177 (392)
Q Consensus 119 ~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~g---------------------G~~~~ 177 (392)
.++|+. +.+-...=+....-..++.-+.... ++++++.. |.
T Consensus 167 ~vlD~~-T~~v~~~~~~~~~~~~~~Yd~~~~p--------------~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d--- 228 (462)
T 2ece_A 167 LMLDHY-SFEPLGKWEIDRGDQYLAYDFWWNL--------------PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGN--- 228 (462)
T ss_dssp EEECTT-TCCEEEECCSBCTTCCCCCCEEEET--------------TTTEEEECBCCCHHHHTTCCCTTTHHHHSCC---
T ss_pred EEEECC-CCeEEEEEccCCCCccccceEEECC--------------CCCEEEEccCcCccccccccchhhhhhccCC---
Q ss_pred CcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-------CCEEEEEee-----cccEEEEEECCCC
Q 016239 178 GGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF-------RGRFYVFGI-----YSFSVSSFDLKKH 245 (392)
Q Consensus 178 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-------~g~ly~~gg-----~~~~i~~yd~~~~ 245 (392)
++.+||..++ +.+..++.+ ..+ .....+ +..+|+... .++.|++|....+
T Consensus 229 ----------~V~v~D~~~~--k~~~tI~vg-~~g-----~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 229 ----------RIHFWDLRKR--KRIHSLTLG-EEN-----RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp ----------EEEEEETTTT--EEEEEEESC-TTE-----EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred ----------EEEEEECCCC--cEeeEEecC-CCC-----CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Q ss_pred ceeeccc--CCC-----------------CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeec-CccceEecccCCHH
Q 016239 246 VWSEVQT--LRP-----------------PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDE-LSMEFSEIAIMPHD 305 (392)
Q Consensus 246 ~W~~i~~--~~~-----------------~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~-~~~~W~~~~~~p~~ 305 (392)
+|+.+.. .+. ........+..+|+.+.+.-.. ...|.+||. +..+.+.+..++..
T Consensus 291 ~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg-----~d~VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 291 KWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG-----IGEVRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp EEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT-----TTEEEEEECSSTTSCEEEEEEECB
T ss_pred ceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEEEEeC
Q ss_pred ------------------HHHhhcCCcccCccceeEEEEeCCEEEEEe--------ccccCCCCeEEEEe--ecCCC
Q 016239 306 ------------------FLYSLVDTEEDDKFASLKCVGLGNLIYVFN--------EEYHKKYPACVCEI--GTESD 354 (392)
Q Consensus 306 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g--------g~~~~~~~~~~~~~--d~~~~ 354 (392)
+ .+++...|.+||+.+ -.|-......++.+ |++++
T Consensus 366 G~~~~~~~~~G~~~~ggPr--------------~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G 428 (462)
T 2ece_A 366 GIFHRADHPAGHKLTGAPQ--------------MLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG 428 (462)
T ss_dssp TTTTCBCCTTSCCCCSCCC--------------CEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC
T ss_pred CeeccccccccccCCCCCC--------------EEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC
No 267
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=70.73 E-value=62 Score=34.20 Aligned_cols=157 Identities=11% Similarity=0.114 Sum_probs=78.6
Q ss_pred CeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCC
Q 016239 166 PKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKH 245 (392)
Q Consensus 166 ~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~ 245 (392)
..++++|-.. ..+.++......+.+|+...++.+.+...+.. . ...+.+.++|+|.+ |..+.+..||...+
T Consensus 844 ~~~lvVGTa~-~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~--g----~v~al~~~~g~Lla--~ig~~l~vy~l~~~ 914 (1158)
T 3ei3_A 844 NTYFIVGTAM-VYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK--G----AVYSMVEFNGKLLA--SINSTVRLYEWTTE 914 (1158)
T ss_dssp CCEEEEEEEE-CCTTCSSCCCEEEEEEEEETTEEEEEEEEEES--S----CEEEEEEETTEEEE--EETTEEEEEEECTT
T ss_pred CEEEEEEeee-cCCCCCCCCceEEEEEEEECCEEEEEEEEEcC--C----cCEEEeeeCCEEEE--EcCCEEEEEECCCC
Confidence 4566666432 11111112344678887765566655432221 1 12566678896554 44468999998766
Q ss_pred ceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEE
Q 016239 246 VWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCV 325 (392)
Q Consensus 246 ~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
+.-..............+...++.|++..-. .++.+.+|+...++-..++.-... +...++.
T Consensus 915 ~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~-----~Sv~~~~y~~~~~~L~~~a~D~~~-------------~~vta~~ 976 (1158)
T 3ei3_A 915 KELRTECNHYNNIMALYLKTKGDFILVGDLM-----RSVLLLAYKPMEGNFEEIARDFNP-------------NWMSAVE 976 (1158)
T ss_dssp SCEEEEEEECCCSCEEEEEEETTEEEEEESS-----BCEEEEEEETTTTEEEEEEECCSC-------------BCEEEEE
T ss_pred ceEEEEeeccccEEEEEEeccCCEEEEEEhh-----heEEEEEEEcCCCeEEEEEeeccc-------------ccEEEEE
Confidence 4222111000011111233446655543321 267888888887777777653333 3344555
Q ss_pred EeCCEEEEEeccccCCCCeEEEEeecC
Q 016239 326 GLGNLIYVFNEEYHKKYPACVCEIGTE 352 (392)
Q Consensus 326 ~~~~~i~v~gg~~~~~~~~~~~~~d~~ 352 (392)
.+++. .++++ +..+.+.+++++++
T Consensus 977 ~ld~~-t~l~a--D~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 977 ILDDD-NFLGA--ENAFNLFVCQKDSA 1000 (1158)
T ss_dssp EEETT-EEEEE--ETTSEEEEEEECTT
T ss_pred EEccC-cEEEE--cCCCcEEEEecCCC
Confidence 44333 33343 33455666777553
No 268
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=70.68 E-value=57 Score=28.90 Aligned_cols=138 Identities=12% Similarity=0.075 Sum_probs=70.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCC---eecCCCCCCCCCCCCCccceeeEEE-CC-EEEEEeecccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDS---WELCPPLPADFRSGYSSQYLSSALF-RG-RFYVFGIYSFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~~~~i~~ 239 (392)
++.+||.+... ...+.++|+.... |-.-.+.... +.+ ..+.+.. +| .|++..+ .+.|.+
T Consensus 147 ~GnaYVt~s~~----------~~~I~rV~pdG~~~~~~~~~~~~~~~-~~G----~nGIv~~pdg~~Liv~~~-~g~L~~ 210 (334)
T 2p9w_A 147 DGNSYVAFALG----------MPAIARVSADGKTVSTFAWESGNGGQ-RPG----YSGITFDPHSNKLIAFGG-PRALTA 210 (334)
T ss_dssp TSCEEEEEEES----------SCEEEEECTTSCCEEEEEECCCCSSS-CCS----CSEEEEETTTTEEEEESS-SSSEEE
T ss_pred CCCEEEeCCCC----------CCeEEEEeCCCCEEeeeeecCCCccc-ccC----cceEEEeCCCCEEEEEcC-CCeEEE
Confidence 78899976541 0257888876432 4322221222 333 2455555 35 5666666 889999
Q ss_pred EECCCCceeecccC--C--CCcccceeE--EeeCCeEEEEEeecCCCCCceeEEEeecCccceEeccc---CCHHHHHhh
Q 016239 240 FDLKKHVWSEVQTL--R--PPGVMFSFL--IASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI---MPHDFLYSL 310 (392)
Q Consensus 240 yd~~~~~W~~i~~~--~--~~~~~~~~~--~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~---~p~~~~~~~ 310 (392)
||+.+.....++.. . ........+ ...+|+++++.... ..++++-.... |+.... .|...
T Consensus 211 fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~------~~~~~l~S~Dg-W~sa~~~g~~~~~~---- 279 (334)
T 2p9w_A 211 FDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA------PYAISFRSWDN-WKSANIKKTKRSEL---- 279 (334)
T ss_dssp EECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET------TEEEEEECSST-TSEEEEEEEECGGG----
T ss_pred EcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCC------CCEEEEECCCC-cceeEEeeeecCcc----
Confidence 99885432123211 0 001111222 23699997776432 12344433333 876543 34321
Q ss_pred cCCcccCccceeEEE-E----eCCEEEEEec
Q 016239 311 VDTEEDDKFASLKCV-G----LGNLIYVFNE 336 (392)
Q Consensus 311 ~~~~~~~~~~~~~~~-~----~~~~i~v~gg 336 (392)
. . ..++.+ . .+++||++.+
T Consensus 280 ~-~------~g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 280 Q-N------SGFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp G-S------SCEEEEEEEEETTEEEEEEEEC
T ss_pred c-c------CceeEEEEeccccCCeEEEEee
Confidence 1 0 122332 3 7899999886
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=69.61 E-value=60 Score=28.72 Aligned_cols=102 Identities=6% Similarity=-0.084 Sum_probs=57.4
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEEC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDL 242 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~ 242 (392)
++.+|+.-.. ....+++++.....-+.+.. ..... ..+.+.- ++.||+.-...+.|.++|+
T Consensus 170 ~g~ly~td~~----------~~~~I~r~~~dG~~~~~~~~--~~~~~-----PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 170 EGTIYWTDWG----------NTPRIEASSMDGSGRRIIAD--THLFW-----PNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp TTEEEEEECS----------SSCEEEEEETTSCSCEESCC--SSCSC-----EEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCeEEEeccC----------CCCEEEEEeCCCCCcEEEEE--CCCCC-----cceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 6788887422 12468888876544333321 11111 1334443 6899999877789999998
Q ss_pred CCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeec
Q 016239 243 KKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDE 291 (392)
Q Consensus 243 ~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~ 291 (392)
....-..+..... ..-..+++.++.||+.... ...|+++|.
T Consensus 233 dG~~~~~~~~~~~--~~P~giav~~~~ly~td~~------~~~V~~~~~ 273 (349)
T 3v64_C 233 DGSHRKAVISQGL--PHPFAITVFEDSLYWTDWH------TKSINSANK 273 (349)
T ss_dssp TSCSCEEEECSSC--SSEEEEEEETTEEEEEETT------TTEEEEEET
T ss_pred CCCceEEEEeCCC--CCceEEEEECCEEEEecCC------CCeEEEEEc
Confidence 6533222211111 1123345578999998632 345667774
No 270
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=69.46 E-value=81 Score=30.22 Aligned_cols=106 Identities=9% Similarity=0.023 Sum_probs=56.8
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCC
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
+++.++.|+.+ .++.++|..+.+....-......... ...+..++...+.++..+.+..+|+.+
T Consensus 250 dg~~l~s~s~D-----------~~v~lWd~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 250 DGTKIASASAD-----------KTIKIWNVATLKVEKTIPVGTRIEDQ-----QLGIIWTKQALVSISANGFINFVNPEL 313 (611)
T ss_dssp TSSEEEEEETT-----------SEEEEEETTTTEEEEEEECCSSGGGC-----EEEEEECSSCEEEEETTCCEEEEETTT
T ss_pred CCCEEEEEeCC-----------CeEEEEeCCCCceeeeecCCCCccce-----eEEEEEcCCEEEEEeCCCcEEEEeCCC
Confidence 55666666642 26888998776553321111111111 233445777777888888899999877
Q ss_pred CceeecccCCCCcccceeE-EeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 245 HVWSEVQTLRPPGVMFSFL-IASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 245 ~~W~~i~~~~~~~~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
.+-... ..........+ ...+|+.++.++.++ .+.+| |..+.
T Consensus 314 ~~~~~~--~~gh~~~v~~l~~spdg~~l~s~s~D~----~v~~W--d~~~~ 356 (611)
T 1nr0_A 314 GSIDQV--RYGHNKAITALSSSADGKTLFSADAEG----HINSW--DISTG 356 (611)
T ss_dssp TEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS----CEEEE--ETTTC
T ss_pred CCcceE--EcCCCCCEEEEEEeCCCCEEEEEeCCC----cEEEE--ECCCC
Confidence 653222 11111111122 223677777766443 67777 54443
No 271
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=68.87 E-value=25 Score=30.20 Aligned_cols=56 Identities=13% Similarity=-0.024 Sum_probs=31.4
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECC-EEEEEeecccEEEEEECCCCcee
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRG-RFYVFGIYSFSVSSFDLKKHVWS 248 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g-~ly~~gg~~~~i~~yd~~~~~W~ 248 (392)
.+.++|..+++-...-..+...-.. ...+. -+| .+|+.+...+.|..+|+.+.+-.
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTP-----MVPMVAPGGRIAYATVNKSESLVKIDLVTGETL 69 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCC-----CCEEECTTSSEEEEEETTTTEEEEEETTTCCEE
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCc-----cceEEcCCCCEEEEEeCCCCeEEEEECCCCCeE
Confidence 6888888776433221122100000 22222 245 68888777789999999887643
No 272
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=68.78 E-value=75 Score=30.10 Aligned_cols=96 Identities=14% Similarity=-0.004 Sum_probs=53.3
Q ss_pred EEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeecc----cEEEEEECCCCceeecccCCCCcccceeEE
Q 016239 189 VEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYS----FSVSSFDLKKHVWSEVQTLRPPGVMFSFLI 264 (392)
Q Consensus 189 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~----~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~ 264 (392)
..+||..++.-+.+...+. . .....-+|+..++++.. ..|+.+|+.+.+.+.+..... .......
T Consensus 134 ~~l~d~~~g~~~~l~~~~~----~-----~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~--~~~~~~~ 202 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG----F-----GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG--SFSSASI 202 (582)
T ss_dssp EEEEEEETTEEEEEEEESS----C-----EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC--EEEEEEE
T ss_pred ceEEEccCCcEEEeecCCC----c-----eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC--ccccceE
Confidence 3377887776655542211 1 23334466655554433 579999999988876633221 1122223
Q ss_pred eeCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 265 ASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 265 ~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
.-+|+.++.+.... ...||.+|.++.+.+.+
T Consensus 203 SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~~ 233 (582)
T 3o4h_A 203 SPGMKVTAGLETAR----EARLVTVDPRDGSVEDL 233 (582)
T ss_dssp CTTSCEEEEEECSS----CEEEEEECTTTCCEEEC
T ss_pred CCCCCEEEEccCCC----eeEEEEEcCCCCcEEEc
Confidence 44777655332211 35677778887776633
No 273
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=67.44 E-value=77 Score=29.15 Aligned_cols=64 Identities=11% Similarity=0.073 Sum_probs=36.3
Q ss_pred CCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeec-------------CcceEecC
Q 016239 60 SPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTT-------------PRFGFSRI 124 (392)
Q Consensus 60 ~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~g-------------g~~~ynp~ 124 (392)
.....+|+......... +.+..+|+.+++-. ..++..... .++.. +..+|+.. .+.++|+.
T Consensus 82 ~~~~~vyV~n~~~~~~~-~~VsVID~~t~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAI-TQQFVIDGSTGRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSS-EEEEEEETTTTEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCC-CeEEEEECCCCEEE--EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 34567888754321111 67899999887643 222222222 34443 55688874 14788987
Q ss_pred CcCc
Q 016239 125 LNTS 128 (392)
Q Consensus 125 ~~~~ 128 (392)
+.+
T Consensus 158 -t~~ 160 (426)
T 3c75_H 158 -TFL 160 (426)
T ss_dssp -TCC
T ss_pred -CCc
Confidence 454
No 274
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=66.78 E-value=1e+02 Score=30.25 Aligned_cols=152 Identities=14% Similarity=0.102 Sum_probs=71.9
Q ss_pred cceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCE-EEEEeec------------ccEEEEEECCCCceee--
Q 016239 185 DRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGR-FYVFGIY------------SFSVSSFDLKKHVWSE-- 249 (392)
Q Consensus 185 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~-ly~~gg~------------~~~i~~yd~~~~~W~~-- 249 (392)
...++.++|..+++..... .+.. +.. ..+-. +|+ ||..... ...|+.+++.+.+=+.
T Consensus 153 ~~~~i~v~dl~tg~~~~~~-~~~~-k~~-----~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~ 224 (693)
T 3iuj_A 153 DWREIHLMDVESKQPLETP-LKDV-KFS-----GISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRL 224 (693)
T ss_dssp CEEEEEEEETTTCSEEEEE-EEEE-ESC-----CCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEE
T ss_pred ceEEEEEEECCCCCCCccc-cCCc-eec-----cEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceE
Confidence 3458999999998865431 1110 111 11223 554 4444221 2468888887764321
Q ss_pred cccCCC--CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc--ceEecccCCHHHHHhhcCCcccCccceeEEE
Q 016239 250 VQTLRP--PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM--EFSEIAIMPHDFLYSLVDTEEDDKFASLKCV 325 (392)
Q Consensus 250 i~~~~~--~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
+-..+. ..........-+|+.+++....... ..++|.+|..+. .|+.+..-... ....+.
T Consensus 225 v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~--~~~i~~~d~~~~~~~~~~l~~~~~~--------------~~~~~~ 288 (693)
T 3iuj_A 225 VFGAIPAQHHRYVGATVTEDDRFLLISAANSTS--GNRLYVKDLSQENAPLLTVQGDLDA--------------DVSLVD 288 (693)
T ss_dssp EESCSGGGCCSEEEEEECTTSCEEEEEEESSSS--CCEEEEEETTSTTCCCEEEECSSSS--------------CEEEEE
T ss_pred EEecCCCCCeEEEEEEEcCCCCEEEEEEccCCC--CcEEEEEECCCCCCceEEEeCCCCc--------------eEEEEe
Confidence 111111 1111222234467655544322211 357888887554 67766442211 112245
Q ss_pred EeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeec
Q 016239 326 GLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 326 ~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
..|+++|+......... .++.+|..+.. ...|+.+
T Consensus 289 ~~g~~l~~~t~~~~~~~--~l~~~d~~~~~-~~~~~~l 323 (693)
T 3iuj_A 289 NKGSTLYLLTNRDAPNR--RLVTVDAANPG-PAHWRDL 323 (693)
T ss_dssp EETTEEEEEECTTCTTC--EEEEEETTSCC-GGGCEEE
T ss_pred ccCCEEEEEECCCCCCC--EEEEEeCCCCC-ccccEEE
Confidence 67889998875322223 33434444322 1238765
No 275
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=66.30 E-value=77 Score=28.72 Aligned_cols=65 Identities=11% Similarity=0.022 Sum_probs=36.8
Q ss_pred CCCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC-------------cceEec
Q 016239 59 ASPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP-------------RFGFSR 123 (392)
Q Consensus 59 ~~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg-------------~~~ynp 123 (392)
......+|+..... ....+.+..+|+.+++-. ..++.....+ ++.. +..+|+... +.++|+
T Consensus 41 ~pd~~~vyV~~~~~-~~~~~~V~ViD~~t~~v~--~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 41 APDARRVYVNDPAH-FAAVTQQFVIDGEAGRVI--GMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCTTEEEEEECGG-GCSSEEEEEEETTTTEEE--EEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCCEEEEEcCcc-cCCCCEEEEEECCCCeEE--EEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 45677888875421 111267899999887643 2222222223 4443 456888741 478898
Q ss_pred CCcCc
Q 016239 124 ILNTS 128 (392)
Q Consensus 124 ~~~~~ 128 (392)
. +.+
T Consensus 117 ~-t~~ 120 (386)
T 3sjl_D 117 V-TLL 120 (386)
T ss_dssp T-TCC
T ss_pred C-CCe
Confidence 7 454
No 276
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=65.89 E-value=55 Score=26.92 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=54.5
Q ss_pred CCEEEEEeecccEEEEEECCCCce---eeccc--CCCCcccceeEEe--eCCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVW---SEVQT--LRPPGVMFSFLIA--SPNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W---~~i~~--~~~~~~~~~~~~~--~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
++++|+|-| +..++||..+..- +.|.. .+.......+++. .++++|++-| ...|+||..+++
T Consensus 87 ~~k~yfFkG--~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~~- 155 (218)
T 1gen_A 87 EEKAVFFAG--NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKK- 155 (218)
T ss_dssp TTEEEEEET--TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTTE-
T ss_pred CCEEEEEeC--CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECcccc-
Confidence 689999977 4789998531100 11211 1111111223333 4789999864 368999987653
Q ss_pred EecccCCHHHHHhhcCCcccCccceeEEEEe--CCEEEEEecc
Q 016239 297 SEIAIMPHDFLYSLVDTEEDDKFASLKCVGL--GNLIYVFNEE 337 (392)
Q Consensus 297 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~gg~ 337 (392)
....-|..+...|.+... ..-++... ++.+|++-|.
T Consensus 156 -v~~gyPr~i~~~w~g~p~----~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 156 -MDPGFPKLIADAWNAIPD----NLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp -ECSSCCEEHHHHSSSCCS----SCSEEEECTTTCEEEEEETT
T ss_pred -ccCCCCcchhhccCCCCC----CCCEEEEEcCCCcEEEEECC
Confidence 233446555555655532 12234443 4899999874
No 277
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=65.58 E-value=53 Score=29.79 Aligned_cols=77 Identities=16% Similarity=0.057 Sum_probs=41.1
Q ss_pred CCEEEEEeecccEEEEEECCCCc------eeeccc------CCCCcccceeEEeeCCeEEEEEeecCC---CCCceeEEE
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV------WSEVQT------LRPPGVMFSFLIASPNMLVLAGMCNAP---RGPSFNLWK 288 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~------W~~i~~------~~~~~~~~~~~~~~~g~l~v~gg~~~~---~~~~~~v~~ 288 (392)
+|++++... .+.++++|..++. |+.... ..+.+....++-.-+++||+.-..... ......||+
T Consensus 237 dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 677665543 4689999987654 431111 111122222222347899986532211 123578999
Q ss_pred eecCccceEecccCC
Q 016239 289 VDELSMEFSEIAIMP 303 (392)
Q Consensus 289 ~d~~~~~W~~~~~~p 303 (392)
+|..+.+ .+..++
T Consensus 316 iD~~t~k--v~~~i~ 328 (386)
T 3sjl_D 316 LDAKTGE--RLAKFE 328 (386)
T ss_dssp EETTTCC--EEEEEE
T ss_pred EECCCCe--EEEEEE
Confidence 9987655 444443
No 278
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=65.45 E-value=57 Score=26.90 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=36.6
Q ss_pred eeEEECCEEEEEeecccEEEEEECCCC-ce-----eeccc---CCCC--cccceeEEee--CCeEEEEEeecCCCCCcee
Q 016239 219 SSALFRGRFYVFGIYSFSVSSFDLKKH-VW-----SEVQT---LRPP--GVMFSFLIAS--PNMLVLAGMCNAPRGPSFN 285 (392)
Q Consensus 219 ~~~~~~g~ly~~gg~~~~i~~yd~~~~-~W-----~~i~~---~~~~--~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~ 285 (392)
++...+|++|+|-| ...++|+..++ +- +.|.. .|.. .....+++.. ++++|++-| ..
T Consensus 67 AA~~~~~~~yfFkG--~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--------~~ 136 (219)
T 1hxn_A 67 AAFSWEDKLYLIQD--TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--------RR 136 (219)
T ss_dssp EEEEETTEEEEEET--TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--------TE
T ss_pred EEEEECCcEEEecC--CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--------CE
Confidence 34445899999977 47899987532 11 11111 1111 0012233333 689999875 35
Q ss_pred EEEeecCc
Q 016239 286 LWKVDELS 293 (392)
Q Consensus 286 v~~~d~~~ 293 (392)
.|+||..+
T Consensus 137 ywr~d~~~ 144 (219)
T 1hxn_A 137 LWWLDLKS 144 (219)
T ss_dssp EEEEEGGG
T ss_pred EEEEeCCC
Confidence 79998654
No 279
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=65.10 E-value=67 Score=27.60 Aligned_cols=63 Identities=8% Similarity=0.042 Sum_probs=36.1
Q ss_pred CEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
+.+++.|+.++.|..||+.+.+-...-.... ..........++++++.|+.++ .+.+| |..+.
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~sp~g~~l~s~~~dg----~i~iw--d~~~~ 228 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHN-SNINTLTASPDGTLIASAGKDG----EIMLW--NLAAK 228 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCC-SCEEEEEECTTSSEEEEEETTC----EEEEE--ETTTT
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCC-CcEEEEEEcCCCCEEEEEeCCC----eEEEE--ECCCC
Confidence 4467778888899999997754322111111 1111222233778877776543 68888 65543
No 280
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=64.95 E-value=36 Score=29.64 Aligned_cols=67 Identities=13% Similarity=0.036 Sum_probs=41.9
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
++.+|+++...+.|+.||+.+++...+.. +. ........-+|++++.. . ..|+++|..+.+.+.+..
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~~--~v~~i~~~~dg~l~v~~--~------~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHAL-PF--MGSALAKISDSKQLIAS--D------DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEEC-SS--CEEEEEEEETTEEEEEE--T------TEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEEC-CC--cceEEEEeCCCeEEEEE--C------CCEEEEECCCCcEEEEee
Confidence 37899998777899999998887655432 11 11122234478877754 1 136677877766665543
No 281
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=63.64 E-value=3.1 Score=24.52 Aligned_cols=18 Identities=44% Similarity=0.534 Sum_probs=13.7
Q ss_pred CcccCCcHHHHHHHHhhC
Q 016239 8 SAFTTLSTDITERILSLL 25 (392)
Q Consensus 8 ~~~~~Lp~dl~~~iL~rL 25 (392)
+-+..||.||.+++|+--
T Consensus 19 eVF~~LP~dIQ~Ells~~ 36 (48)
T 2kwv_A 19 EVFKQLPADIQEEILSGK 36 (48)
T ss_dssp GGTTTSCHHHHHHHTTCC
T ss_pred HHHHHCcHHHHHHHHhcc
Confidence 556778999988888643
No 282
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=63.60 E-value=52 Score=32.04 Aligned_cols=62 Identities=8% Similarity=0.037 Sum_probs=35.9
Q ss_pred CCEEEEEeecccEEEEEECCCCceee-----cc-cCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSE-----VQ-TLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~-----i~-~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
++++|+|-|. ..++||..+++-.. +. ..+.......++... +|++|++-| ...|+||..+..
T Consensus 548 ~gktYFFkG~--~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG--------~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 548 NKKTYIFAGD--KFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG--------AYYLKLENQSLK 617 (631)
T ss_dssp TCEEEEEETT--EEEEEETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEET--------TEEECCBTTBTT
T ss_pred CCeEEEEECC--EEEEEcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEEC--------CEEEEEeCccce
Confidence 6899999874 78999987653211 11 111111122233443 388998864 356888876543
No 283
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=63.43 E-value=70 Score=28.60 Aligned_cols=91 Identities=14% Similarity=0.110 Sum_probs=49.8
Q ss_pred ccEEEEEECCC--CceeecccCC--C--CcccceeEEee---CC--eEEEEEeecCCCCCceeEEEeecCccceEecccC
Q 016239 234 SFSVSSFDLKK--HVWSEVQTLR--P--PGVMFSFLIAS---PN--MLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIM 302 (392)
Q Consensus 234 ~~~i~~yd~~~--~~W~~i~~~~--~--~~~~~~~~~~~---~g--~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~ 302 (392)
.+.|+.||+.+ .+-+++.... + ....-+.+... +| +||++... .....+++|.+|+.+...+.+...
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~--~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP--GSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS--TTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC--CCCCeEEEEEEECCCCEEEEEecc
Confidence 46889999874 3444443221 1 11222333322 35 46777643 233479999999887766655554
Q ss_pred CHHHHHhhcCCcccCccceeEEEEeCCEEEEEec
Q 016239 303 PHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 303 p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg 336 (392)
....+ .+.+-.++..++.+|+.+-
T Consensus 160 ~g~~~----------~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 160 RHKLL----------PSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp CCTTC----------SSEEEEEEEETTEEEEEES
T ss_pred ccCCC----------CCCceEEEeCCCCEEecCC
Confidence 33221 1224455667788888654
No 284
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=63.39 E-value=83 Score=28.11 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=33.5
Q ss_pred CCCCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeec------------C-cceEecC
Q 016239 60 SPRPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTT------------P-RFGFSRI 124 (392)
Q Consensus 60 ~~~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~g------------g-~~~ynp~ 124 (392)
....++|+..+...... ..+..||+.+++-. ..++..... .++.. +..+|+.. + +.++|+.
T Consensus 30 ~~~~~~yv~~~~~~~~~-~~v~v~D~~t~~~~--~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAI-IQQWVLDAGSGSIL--GHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCEEEEeCCcccCCc-cEEEEEECCCCeEE--EEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 34567888754111111 17889999876642 333333322 33333 55788874 1 3688887
No 285
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=61.13 E-value=1.3e+02 Score=29.49 Aligned_cols=110 Identities=12% Similarity=0.082 Sum_probs=51.8
Q ss_pred EEEEEECCCCceee--cccCCC-CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCc------c--ceEecccCCH
Q 016239 236 SVSSFDLKKHVWSE--VQTLRP-PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELS------M--EFSEIAIMPH 304 (392)
Q Consensus 236 ~i~~yd~~~~~W~~--i~~~~~-~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~------~--~W~~~~~~p~ 304 (392)
.|+.+++.+.+-+. +-..+. ..........-+|+.+++....... ...++|.+|..+ . .++.+..-..
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD-PVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS-SCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC-CccEEEEEECcccccccCCccceEEeeCCCC
Confidence 48899998876432 212111 1111222234466655554332211 145777778765 3 4666544211
Q ss_pred HHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCccceeeeec
Q 016239 305 DFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRL 363 (392)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~ 363 (392)
. ....+...|+.||+.+.... ....++.+|..+.. ...|+.+
T Consensus 288 ~--------------~~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~-~~~~~~l 329 (710)
T 2xdw_A 288 G--------------EYDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPE-ESKWKVL 329 (710)
T ss_dssp S--------------CEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCC-GGGCEEE
T ss_pred c--------------EEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCC-cccceec
Confidence 1 12234456788888875322 22233444544331 0127766
No 286
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=60.71 E-value=80 Score=27.06 Aligned_cols=61 Identities=10% Similarity=0.124 Sum_probs=35.2
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeec
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDE 291 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~ 291 (392)
+|.+.+.|+.++.|..||..+.+-...-. ............++.+++.+... .+.+|.++.
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~la~~~~~-----~i~v~~~~~ 267 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKAMYTLS--AQDEVFSLAFSPNRYWLAAATAT-----GIKVFSLDP 267 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEEEEEE--CCSCEEEEEECSSSSEEEEEETT-----EEEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCcEEEEEEcCCCCEEEEEcCC-----CcEEEEeCc
Confidence 67888889988999999998764322111 11111222233366666555422 577886654
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=60.30 E-value=36 Score=32.82 Aligned_cols=78 Identities=19% Similarity=0.110 Sum_probs=47.3
Q ss_pred eEEEEEeCCCCC--eecCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEEEECCCCc--eeecccCCCCccccee
Q 016239 187 LAVEIYDPHSDS--WELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSSFDLKKHV--WSEVQTLRPPGVMFSF 262 (392)
Q Consensus 187 ~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~yd~~~~~--W~~i~~~~~~~~~~~~ 262 (392)
..+..+|+.+++ |+.-...+. .+ ...+..+|.+|+ |...+.+.+||.++.+ |+.-.. ........
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~~~---~~-----g~~~tagglvf~-g~~dg~l~A~D~~tG~~lW~~~~~--~g~~a~P~ 534 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHLPL---WA-----GVLATAGNLVFT-GTGDGYFKAFDAKSGKELWKFQTG--SGIVSPPI 534 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC---CS-----CCEEETTTEEEE-ECTTSEEEEEETTTCCEEEEEECS--SCCCSCCE
T ss_pred ceEEEEECCCCCEEEEecCCCCC---cc-----cceEeCCCEEEE-ECCCCcEEEEECCCCCEEEEecCC--CCcccCce
Confidence 468889998775 886543322 11 233344677776 6677899999998764 665322 11112222
Q ss_pred EEeeCCeEEEEEe
Q 016239 263 LIASPNMLVLAGM 275 (392)
Q Consensus 263 ~~~~~g~l~v~gg 275 (392)
....+|++||.-.
T Consensus 535 ~y~~~G~qYv~~~ 547 (582)
T 1flg_A 535 TWEQDGEQYLGVT 547 (582)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEECCEEEEEEE
Confidence 2347999998753
No 288
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=58.94 E-value=1.1e+02 Score=28.25 Aligned_cols=109 Identities=8% Similarity=0.059 Sum_probs=59.4
Q ss_pred CCEEEEEeecccEEEEEECCCCc--e-eecc---cCCC-CcccceeEEe-eCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV--W-SEVQ---TLRP-PGVMFSFLIA-SPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~--W-~~i~---~~~~-~~~~~~~~~~-~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
+|++|+|-|. .+++|+..+-. + ..|. ..|. .....+++.. .++++|++-| ...|+||..+.+
T Consensus 318 ~g~~~fFKg~--~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~~ 387 (450)
T 1su3_A 318 RDEVRFFKGN--KYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKRS 387 (450)
T ss_dssp GTEEEEEETT--EEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTE
T ss_pred CCeEEEEeCC--EEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCcc
Confidence 6999999874 67888743210 0 1111 1121 1122233222 2689999864 378999876542
Q ss_pred eEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEeccccCCCCeEEEEeecCCCc
Q 016239 296 FSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEIGTESDK 355 (392)
Q Consensus 296 W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~~~~~~~~~~~~~d~~~~~ 355 (392)
....-|..+...|-+... ..-+++..++++|+|-|.. ++++|..+.+
T Consensus 388 --~~~gYPk~I~~~fpgip~----~iDAA~~~~g~~YFFkg~~-------ywr~d~~~~~ 434 (450)
T 1su3_A 388 --MDPGYPKMIAHDFPGIGH----KVDAVFMKDGFFYFFHGTR-------QYKFDPKTKR 434 (450)
T ss_dssp --ECSSCSEEHHHHSTTSCS----CCSEEEEETTEEEEEETTE-------EEEEETTTTE
T ss_pred --ccCCCCcchhhcCCCCCC----CccEEEEcCCeEEEEeCCE-------EEEEECCcce
Confidence 233345555444444321 1334445789999998742 3566665555
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=58.46 E-value=1.2e+02 Score=28.46 Aligned_cols=112 Identities=13% Similarity=0.060 Sum_probs=56.8
Q ss_pred cceEEeecC----cceEecCCcCceeecCCCCcCccC--ceEEEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccc
Q 016239 109 NGFFFTTTP----RFGFSRILNTSWHLTSPLRFSRIN--PLVGVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVD 182 (392)
Q Consensus 109 ~g~i~v~gg----~~~ynp~~~~~W~~~~~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~ 182 (392)
++.||+.-. ..+.|+. ++....+......... ..+++.. ..-|+..++..+|+.--... .
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~-~~~v~~l~~~~~~~~~~p~~ia~~~--------~~~~~d~~G~~lyvad~~~~-----~ 216 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLK-NRMLSSPLNINTIPTNRIRSIAFNK--------KIEGYADEAEYMIVAIDYDG-----K 216 (496)
T ss_dssp EEEEEEEEETEEEEEEEETT-TTEEEEEECCTTSSCSBEEEEEECC--------CBTTTBCTTCEEEEEECCCT-----T
T ss_pred CCEEEEEECCCCeEEEEECC-CCEEEEEEccCccccCCCcEEEEee--------cccccCCCCCEEEEEeCCCC-----C
Confidence 467888743 3677887 5666655443322211 1222200 00112222556888743210 0
Q ss_pred cccceEEEEEeCCC-CCee------cCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECC
Q 016239 183 IEDRLAVEIYDPHS-DSWE------LCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLK 243 (392)
Q Consensus 183 ~~~~~~~~~yd~~~-~~W~------~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~ 243 (392)
......+..++... +.|. .++....+ +..+.. ++.||+..-..+.|++||+.
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p---------~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAAYKQC---------NGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEEESCC---------CCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred cccCceEEEEecCCCCceeecccceeeccCCCc---------eEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 01234577776544 3554 22221111 333333 47899988777899999997
No 290
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.10 E-value=96 Score=27.12 Aligned_cols=108 Identities=7% Similarity=-0.055 Sum_probs=55.0
Q ss_pred ceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCE-EEEEee-cc----cEEEEEECCCCceeecccCCCCc
Q 016239 186 RLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGR-FYVFGI-YS----FSVSSFDLKKHVWSEVQTLRPPG 257 (392)
Q Consensus 186 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~-ly~~gg-~~----~~i~~yd~~~~~W~~i~~~~~~~ 257 (392)
...+.++|..++..+.+...+.. . ...... ++. |++... .. ..|+.+|+...++..+....+..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~--~------~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 238 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAW--L------GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGE 238 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSC--E------EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTE
T ss_pred cceEEEEECCCCcEEeeccCCcc--c------ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCc
Confidence 34788899888776655421111 1 222232 244 444432 11 47999999887776664421111
Q ss_pred ccceeEEeeCCe-EEEEEeecCCCCCceeEEEeecCccceEecccCC
Q 016239 258 VMFSFLIASPNM-LVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMP 303 (392)
Q Consensus 258 ~~~~~~~~~~g~-l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p 303 (392)
........-+|+ |++...... .....|+.+|..+.+.+.+..++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~ 283 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKG--QTDRVIYKANPETLENEEVMVMP 283 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETT--TCCEEEEEECTTTCCEEEEEECC
T ss_pred cccceEECCCCCEEEEEecCCC--CccceEEEEECCCCCeEEeeeCC
Confidence 111112233565 444433222 11334777798877766665444
No 291
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=57.06 E-value=1.1e+02 Score=27.39 Aligned_cols=20 Identities=35% Similarity=0.614 Sum_probs=16.3
Q ss_pred CCEEEEEeecccEEEEEECCC
Q 016239 224 RGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~ 244 (392)
+|.+.+.++. +.|..||+.+
T Consensus 296 ~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 296 SGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TSSEEEEEES-SEEEEEETTC
T ss_pred CCCEEEEeeC-CeEEEEeCCC
Confidence 5677777777 9999999976
No 292
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=56.47 E-value=22 Score=32.79 Aligned_cols=130 Identities=8% Similarity=-0.056 Sum_probs=64.8
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC--------cceEecCCcCceeecCCCCcCccCceEEEE
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP--------RFGFSRILNTSWHLTSPLRFSRINPLVGVF 147 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg--------~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~ 147 (392)
..+..+|+..+....+... ......++.. ++.||+... +..+++. +.+.....+......+.+++.
T Consensus 159 ~~I~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~--g~~~~~~~l~~~~~p~giavd 234 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE--SGFKVITELTKGQNCNGAETH 234 (430)
T ss_dssp EEEEEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG--GTSCSEEEEEECSSCCCEEEC
T ss_pred CcEEEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC--CceeeeeeeccCCCceEEEEe
Confidence 5688899988776655331 1112234433 445888853 2345543 333311111111112223322
Q ss_pred EcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECCE
Q 016239 148 YDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRGR 226 (392)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~ 226 (392)
..++.||+.--. ...+.+||+.+..-..+...+.. ... ...++ -+|.
T Consensus 235 ---------------p~~g~lyv~d~~-----------~~~V~~~~~~~~~~~~~~~~~~~-~~P-----~gia~~pdG~ 282 (430)
T 3tc9_A 235 ---------------PINGELYFNSWN-----------AGQVFRYDFTTQETTPLFTIQDS-GWE-----FHIQFHPSGN 282 (430)
T ss_dssp ---------------TTTCCEEEEETT-----------TTEEEEEETTTTEEEEEEECSSS-SCC-----EEEEECTTSS
T ss_pred ---------------CCCCEEEEEECC-----------CCEEEEEECCCCcEEEEEEcCCC-Ccc-----eeEEEcCCCC
Confidence 115678887321 12688999876654233222211 111 22232 2455
Q ss_pred -EEEEeecccEEEEEECC
Q 016239 227 -FYVFGIYSFSVSSFDLK 243 (392)
Q Consensus 227 -ly~~gg~~~~i~~yd~~ 243 (392)
||+.....+.|++||..
T Consensus 283 ~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 283 YAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCEEEEEeCC
Confidence 99998777889887764
No 293
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=56.17 E-value=1.6e+02 Score=29.24 Aligned_cols=73 Identities=12% Similarity=0.222 Sum_probs=44.5
Q ss_pred CCEEEEEe--------ecccEEEEEECCCCceeecccCCCCcc--------------cceeEEee-CCeEEEEEeecCCC
Q 016239 224 RGRFYVFG--------IYSFSVSSFDLKKHVWSEVQTLRPPGV--------------MFSFLIAS-PNMLVLAGMCNAPR 280 (392)
Q Consensus 224 ~g~ly~~g--------g~~~~i~~yd~~~~~W~~i~~~~~~~~--------------~~~~~~~~-~g~l~v~gg~~~~~ 280 (392)
++.+|+.. +..+.++..+-...+|+.+.+.+.... .+..+++. .+.||+.+....
T Consensus 256 ~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~gg~~~i~v~~~~~v~~~~~~~~-- 333 (763)
T 3a0f_A 256 NGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSREGANTYPAPTGNKKVVPGGWNGISVGNGDTVVVSTLDAN-- 333 (763)
T ss_dssp TSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSSSSCEESCCCCCTTSCCCEEEEEEECSTBCEEEEEESCT--
T ss_pred CCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCCCCccccccccccccccCCceeEEEcCCCeEEEEecCCC--
Confidence 68889883 334678888888899999865332111 11233333 466777665211
Q ss_pred CCceeEEEeecCccceEec
Q 016239 281 GPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 281 ~~~~~v~~~d~~~~~W~~~ 299 (392)
....+|+=.-...+|+.+
T Consensus 334 -~~~~l~~S~DgG~tW~~~ 351 (763)
T 3a0f_A 334 -GEDSVYLSRDAGNSWKDL 351 (763)
T ss_dssp -TSCCEEEESBTTSSEEEH
T ss_pred -CCCCEEEECCCCCCcccC
Confidence 235566555457789988
No 294
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=55.38 E-value=1.1e+02 Score=26.82 Aligned_cols=107 Identities=10% Similarity=-0.020 Sum_probs=54.3
Q ss_pred eEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-E-CCEEEEEeec------ccEEEEEECCCCceeecccCCCCcc
Q 016239 187 LAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-F-RGRFYVFGIY------SFSVSSFDLKKHVWSEVQTLRPPGV 258 (392)
Q Consensus 187 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~-~g~ly~~gg~------~~~i~~yd~~~~~W~~i~~~~~~~~ 258 (392)
..+.++|..+++-+.+..-+.. . ..... - +|+..++... ...|+.+|........+........
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~~--~------~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQW--L------GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGES 239 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESSC--E------EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEE
T ss_pred ceEEEEECCCCceEEeecCCcc--c------cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcc
Confidence 5788999988765555321111 1 12222 2 4543333221 2479999988776655543221111
Q ss_pred cceeEEeeCCe-EEEEEeecCCCCCceeEEEeecCccceEecccCC
Q 016239 259 MFSFLIASPNM-LVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMP 303 (392)
Q Consensus 259 ~~~~~~~~~g~-l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p 303 (392)
.......-+|+ |+.+..... .....||.+|..+.+-+.+..++
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKG--SPDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETT--CCCEEEEEECTTTCCEEEEEEEC
T ss_pred cccceECCCCCEEEEEecCCC--CCcceEEEEecCCCceEEEEcCC
Confidence 11112333665 544443221 11345888898887766665544
No 295
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=55.36 E-value=1e+02 Score=26.63 Aligned_cols=61 Identities=8% Similarity=0.052 Sum_probs=35.9
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeec-CCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWEL-CPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFD 241 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd 241 (392)
++.+++.|+. ..++.+||..+++-.. +...... ...+.+ ++...+.|+.++.|..||
T Consensus 87 ~~~~l~s~s~-----------D~~v~lwd~~~~~~~~~~~~h~~~---------v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 87 ENCFAISSSW-----------DKTLRLWDLRTGTTYKRFVGHQSE---------VYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp STTEEEEEET-----------TSEEEEEETTSSCEEEEEECCCSC---------EEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred CCCEEEEEcC-----------CCcEEEEECCCCcEEEEEcCCCCc---------EEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 4556666654 1268889987765321 1111111 222333 567777888888999999
Q ss_pred CCCC
Q 016239 242 LKKH 245 (392)
Q Consensus 242 ~~~~ 245 (392)
...+
T Consensus 147 ~~~~ 150 (343)
T 2xzm_R 147 ILGE 150 (343)
T ss_dssp SSSC
T ss_pred ccCC
Confidence 8754
No 296
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=54.64 E-value=1.1e+02 Score=26.55 Aligned_cols=21 Identities=14% Similarity=0.270 Sum_probs=17.6
Q ss_pred CCEEEEEeecccEEEEEECCC
Q 016239 224 RGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~ 244 (392)
+|...+.|+.++.|..||+.+
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp TSSEEEEEETTCEEEEEESSC
T ss_pred CCCEEEEEcCCCeEEEEECCC
Confidence 678888888889999999843
No 297
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=53.88 E-value=1.2e+02 Score=26.77 Aligned_cols=98 Identities=10% Similarity=0.015 Sum_probs=48.2
Q ss_pred EEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEE-ECCEEEEEeecccEEEEEECCCCceeecccCCCCcc-cceeEEe
Q 016239 188 AVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSAL-FRGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGV-MFSFLIA 265 (392)
Q Consensus 188 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~-~~~~~~~ 265 (392)
.+.++|..+.+-...-..... . ...+. -+|++.+.++ .+.+..++..++.-........... .......
T Consensus 158 ~i~iwd~~~~~~~~~~~~~~~--V------~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs 228 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETRGE--V------KDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFI 228 (365)
T ss_dssp EEEEEETTTTEEEEEEECSSC--C------CEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEE
T ss_pred EEEEeECCCCcEEEEeCCCCc--e------EEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEc
Confidence 688889877654332111111 1 12222 2566666655 4567778877665433222222111 1222234
Q ss_pred eCCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 266 SPNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 266 ~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
.+++.++.+..+... ...++.+|......
T Consensus 229 pdg~~l~~~s~d~~~--~~~i~~~~~~~~~~ 257 (365)
T 4h5i_A 229 ADDTVLIAASLKKGK--GIVLTKISIKSGNT 257 (365)
T ss_dssp ETTEEEEEEEESSSC--CEEEEEEEEETTEE
T ss_pred CCCCEEEEEecCCcc--eeEEeeccccccee
Confidence 588888877654432 23444445544433
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=53.72 E-value=1.6e+02 Score=28.44 Aligned_cols=130 Identities=8% Similarity=-0.103 Sum_probs=69.3
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC--CCCCCCCCCCCccceeeEEE--CCEEEEEe-ecccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP--PLPADFRSGYSSQYLSSALF--RGRFYVFG-IYSFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~~--~g~ly~~g-g~~~~i~~ 239 (392)
++.||+.-.. ...+++.+.....-+.+. .+..| .+.++. +|.||+.. |....|++
T Consensus 403 ~~~lY~tD~~-----------~~~I~v~~~~G~~~~~l~~~~l~~P---------~~iavdp~~G~ly~tD~g~~~~I~r 462 (619)
T 3s94_A 403 ARNLYWTDTG-----------TDRIEVTRLNGTMRKILISEDLEEP---------RAIVLDPMVGYMYWTDWGEIPKIER 462 (619)
T ss_dssp TTEEEEEETT-----------TTEEEEEETTSCSCEEEECTTCCSE---------EEEEEETTTTEEEEEECSSSCEEEE
T ss_pred cCcEEEEeCC-----------CCcEEEEeCCCCeEEEEEECCCCCe---------eeEEEEcCCCcEEEecCCCCCEEEE
Confidence 6789987321 236888877654333332 22222 344444 58999986 44468999
Q ss_pred EECCCCceeecccCCCCcccceeEEee--CCeEEEEEeecCCCCCceeEEEeecCccceEecccCCHHHHHhhcCCcccC
Q 016239 240 FDLKKHVWSEVQTLRPPGVMFSFLIAS--PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDD 317 (392)
Q Consensus 240 yd~~~~~W~~i~~~~~~~~~~~~~~~~--~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~ 317 (392)
.++.-..=..+..... ..-..++.. +++||+.-.. ...|++++.+...=+.+..- ..
T Consensus 463 ~~~dG~~~~~l~~~~l--~~P~GlalD~~~~~LY~aD~~------~~~I~~~~~dG~~~~~~~~~--~l----------- 521 (619)
T 3s94_A 463 AALDGSDRVVLVNTSL--GWPNGLALDYDEGKIYWGDAK------TDKIEVMNTDGTGRRVLVED--KI----------- 521 (619)
T ss_dssp EETTSCSCEEEECSSC--SCEEEEEEETTTTEEEEEETT------TTEEEEEESSSCCCEEEEEC--CC-----------
T ss_pred EccCCCccEEEEeCCC--CCCeeeEEcccCCEEEEEECC------CCEEEEEecCCCceEEEecc--CC-----------
Confidence 8875432222211111 111223333 7899998532 23566667654432222110 00
Q ss_pred ccceeEEEEeCCEEEEEec
Q 016239 318 KFASLKCVGLGNLIYVFNE 336 (392)
Q Consensus 318 ~~~~~~~~~~~~~i~v~gg 336 (392)
...+++++.++.||+...
T Consensus 522 -~~P~glav~~~~ly~tD~ 539 (619)
T 3s94_A 522 -PHIFGFTLLGDYVYWTDW 539 (619)
T ss_dssp -CSSCCEEEETTEEEEECT
T ss_pred -CCcEEEEEECCEEEEeec
Confidence 124577788999999874
No 299
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=52.06 E-value=1.1e+02 Score=26.14 Aligned_cols=84 Identities=13% Similarity=0.071 Sum_probs=42.5
Q ss_pred ceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEECCE-EEEEeec-------ccEEEEEECCCCceeecccCCCCc
Q 016239 186 RLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALFRGR-FYVFGIY-------SFSVSSFDLKKHVWSEVQTLRPPG 257 (392)
Q Consensus 186 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~-ly~~gg~-------~~~i~~yd~~~~~W~~i~~~~~~~ 257 (392)
...++.+| ++.++.+..- . . .....-+|+ |++.+.. ...|+.+| ++++..+.......
T Consensus 199 ~~~l~~~d--~~~~~~l~~~-~--~-------~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~ 264 (347)
T 2gop_A 199 FWDIYIWE--DGKEEKMFEK-V--S-------FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRG 264 (347)
T ss_dssp CEEEEEEE--TTEEEEEEEE-E--S-------EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSE
T ss_pred cccEEEeC--CCceEEeccC-c--c-------eeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcc
Confidence 34677777 6666655431 1 1 122244665 4444322 24799999 55665553322211
Q ss_pred ccceeEEeeCCeEEEEEeecCCCCCceeEEEee
Q 016239 258 VMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVD 290 (392)
Q Consensus 258 ~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d 290 (392)
.. ..+...++ +++.+.... ...+| ++
T Consensus 265 ~~-~~~~~sdg-~~~~~~~~~----~~~l~-~~ 290 (347)
T 2gop_A 265 VG-QAKIKDGK-VYFTLFEEG----SVNLY-IW 290 (347)
T ss_dssp EE-EEEEETTE-EEEEEEETT----EEEEE-EE
T ss_pred cC-CccEEcCc-EEEEEecCC----cEEEE-Ec
Confidence 11 11222255 766665433 67899 88
No 300
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=49.72 E-value=1.4e+02 Score=26.35 Aligned_cols=60 Identities=7% Similarity=0.030 Sum_probs=31.6
Q ss_pred CCEEEEEcccCCCCCCCceeeeeCCCCceeeCCCCCCCCCcceEEee--cceEEeecC-------------cceEecC
Q 016239 62 RPWFFLFGLHNTSSRNNQSFAFDPASNSWFHLPPAQEPRAGSCFIGA--NGFFFTTTP-------------RFGFSRI 124 (392)
Q Consensus 62 ~~~l~~~gg~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~g~i~v~gg-------------~~~ynp~ 124 (392)
...+|+.........-..++.+|+.+++-.. .++..... .++.. +..+|+... +.+||+.
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLG--MVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEE--EEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEE--EecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 3567775432111112468889988776432 22222222 33333 557888741 4788876
No 301
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=46.13 E-value=1.2e+02 Score=31.53 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=55.5
Q ss_pred EEE-EEeCCCCCeecCCCCCCCCCCCCCccceeeEEE--CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEE
Q 016239 188 AVE-IYDPHSDSWELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLI 264 (392)
Q Consensus 188 ~~~-~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~ 264 (392)
.++ +||..++.-+.+. ... .. ...+.+ +|+..+++...+.|..+|+.+++-..+....... ......
T Consensus 359 ~l~~~~d~~~~~~~~l~--~~~--~~-----~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~-v~~~~~ 428 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKFE--ENL--GN-----VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM-ITDFTI 428 (1045)
T ss_dssp EEEEEEETTTCCEEECC--CCC--CS-----EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC-CCCEEE
T ss_pred ceEEEEECCCCCceEec--CCc--cc-----eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC-ccceEE
Confidence 567 7888776655544 111 11 222233 6777777777789999999988766553222211 122223
Q ss_pred eeCCeEEEEEeecC--C--CCCceeEEEeecCccceEec
Q 016239 265 ASPNMLVLAGMCNA--P--RGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 265 ~~~g~l~v~gg~~~--~--~~~~~~v~~~d~~~~~W~~~ 299 (392)
.-+|+.++++.... . ......|+.+|..+.+...+
T Consensus 429 SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 429 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred CCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 44777666654332 0 11134566668877654443
No 302
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=45.57 E-value=2.3e+02 Score=27.82 Aligned_cols=139 Identities=12% Similarity=0.024 Sum_probs=69.8
Q ss_pred CCceeeeeCCCC--c-eeeCCCCCCCCCcceEEeecceEEeecC-------cceEecCCc--CceeecCCCCcCccCceE
Q 016239 77 NNQSFAFDPASN--S-WFHLPPAQEPRAGSCFIGANGFFFTTTP-------RFGFSRILN--TSWHLTSPLRFSRINPLV 144 (392)
Q Consensus 77 ~~~~~~yd~~~~--~-W~~~~~~~~~r~~~~~~~~~g~i~v~gg-------~~~ynp~~~--~~W~~~~~~~~~r~~~~~ 144 (392)
..+++.+|..+. . +..+........ ..+...++.|++... .+++|.. + ..|+.+-+-... .-..+
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~l~~~~~~-~l~~~ 369 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQW-DFVDGVGDQLWFVSGDGAPLKKIVRVDLS-GSTPRFDTVVPESKD-NLESV 369 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEECS-SSSCEEEEEECCCSS-EEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceE-EEEeccCCEEEEEECCCCCCCEEEEEeCC-CCccccEEEecCCCC-eEEEE
Confidence 467888888776 5 666643322221 122234666776642 3677876 4 467765432211 11112
Q ss_pred EEEEcCCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCCCCCCCCCCCCccceeeEEE-
Q 016239 145 GVFYDHDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPPLPADFRSGYSSQYLSSALF- 223 (392)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~- 223 (392)
... ++++++.... .....++++|...+.-+.+. +|.. .. ...+..
T Consensus 370 ~~~-----------------~~~lv~~~~~---------dg~~~l~~~~~~g~~~~~l~-~~~~-~~------v~~~~~s 415 (741)
T 1yr2_A 370 GIA-----------------GNRLFASYIH---------DAKSQVLAFDLDGKPAGAVS-LPGI-GS------ASGLSGR 415 (741)
T ss_dssp EEE-----------------BTEEEEEEEE---------TTEEEEEEEETTSCEEEECB-CSSS-CE------EEEEECC
T ss_pred EEE-----------------CCEEEEEEEE---------CCEEEEEEEeCCCCceeecc-CCCC-eE------EEEeecC
Confidence 223 6677776544 12346788886444333332 2211 10 112222
Q ss_pred -CC-EEEEE-eec--ccEEEEEECCCCceeeccc
Q 016239 224 -RG-RFYVF-GIY--SFSVSSFDLKKHVWSEVQT 252 (392)
Q Consensus 224 -~g-~ly~~-gg~--~~~i~~yd~~~~~W~~i~~ 252 (392)
++ .+++. .+. ...|+.||+.+++.+.+..
T Consensus 416 ~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 416 PGDRHAYLSFSSFTQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp BTCSCEEEEEEETTEEEEEEEEETTTTEEEECSC
T ss_pred CCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 33 34333 332 2589999998887666543
No 303
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=45.34 E-value=2.4e+02 Score=27.92 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=52.3
Q ss_pred ceEEEEEeCCCC--Ce--ecCCCCCCCCCCCCCccceeeE-EECCEEEEEeec----ccEEEEEECCC-Cceee-cccCC
Q 016239 186 RLAVEIYDPHSD--SW--ELCPPLPADFRSGYSSQYLSSA-LFRGRFYVFGIY----SFSVSSFDLKK-HVWSE-VQTLR 254 (392)
Q Consensus 186 ~~~~~~yd~~~~--~W--~~~~~~~~~~~~~~~~~~~~~~-~~~g~ly~~gg~----~~~i~~yd~~~-~~W~~-i~~~~ 254 (392)
...++++|..+. .+ +.+.+-... . ..... ..++.||+.... ...|+.+|..+ ..|+. +-...
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~--~-----~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~ 366 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKG--V-----RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS 366 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTT--C-----CEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC
T ss_pred CceEEEEECCCCCCCceeEEeecCCCC--c-----eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC
Confidence 447888888764 45 544321111 0 02222 236788888543 24899999876 68876 42222
Q ss_pred CCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeec
Q 016239 255 PPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDE 291 (392)
Q Consensus 255 ~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~ 291 (392)
. ......+...++.|++....+. ...++.+|.
T Consensus 367 ~-~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl 398 (751)
T 2xe4_A 367 E-DVFMESIAVRSNYLVVAGRRAG----LTRIWTMMA 398 (751)
T ss_dssp S-SEEEEEEEECSSEEEEEEEETT----EEEEEEEEC
T ss_pred C-CcEEEEEEEECCEEEEEEEeCC----EEEEEEEec
Confidence 1 1122233445777777664332 567788785
No 304
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=45.10 E-value=67 Score=28.51 Aligned_cols=74 Identities=5% Similarity=-0.090 Sum_probs=37.0
Q ss_pred CCEEEEEeecccEEEEEECCCC--ceeeccc--CCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEec
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKH--VWSEVQT--LRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEI 299 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~--~W~~i~~--~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~ 299 (392)
++.+| ++...+.|+++|.+++ .|+.-.. .++....... ...++.++++.... ...++.+|..+..|+.-
T Consensus 10 ~~~V~-v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~-~~~~~~~~vv~p~~-----dG~l~a~~~~~G~~~~~ 82 (339)
T 2be1_A 10 SDILI-AADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPS-RLETYETLIIEPFG-----DGNIYYFNAHQGLQKLP 82 (339)
T ss_dssp EEEEE-EEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSC-TTTSSEEEEECCST-----TTEEEEEETTTEEEEEE
T ss_pred CCEEE-EEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCc-cccCCcEEEEEECC-----CCEEEEEECCCCcEEee
Confidence 44444 4555678999998665 6876433 1110000000 11245566553211 34667777766665543
Q ss_pred ccCCH
Q 016239 300 AIMPH 304 (392)
Q Consensus 300 ~~~p~ 304 (392)
..+|.
T Consensus 83 ~~~~~ 87 (339)
T 2be1_A 83 LSIRQ 87 (339)
T ss_dssp EEHHH
T ss_pred ecccc
Confidence 33443
No 305
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=43.73 E-value=1.6e+02 Score=25.56 Aligned_cols=62 Identities=3% Similarity=-0.014 Sum_probs=36.8
Q ss_pred CCEEEEEeecccE-EEEEECCCCceee-cccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEe
Q 016239 224 RGRFYVFGIYSFS-VSSFDLKKHVWSE-VQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKV 289 (392)
Q Consensus 224 ~g~ly~~gg~~~~-i~~yd~~~~~W~~-i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~ 289 (392)
+|.+.+.|+.++. |..+|..+.+-.. +..-.............++++++.++.+. .+.+|.+
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~----~v~iw~~ 269 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW----TLHVFEI 269 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTC----EEEEEES
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC----EEEEEEc
Confidence 6788888888887 9999998764322 21000111111222233778777776543 7888855
No 306
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=42.70 E-value=1.1e+02 Score=29.69 Aligned_cols=98 Identities=11% Similarity=0.103 Sum_probs=50.4
Q ss_pred CCEEEEEeecccEEEEEECCCC--ce-eeccc--CCC-CcccceeEE-eeCCeEEEEEeecCCCCCceeEEEeecCccce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKH--VW-SEVQT--LRP-PGVMFSFLI-ASPNMLVLAGMCNAPRGPSFNLWKVDELSMEF 296 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~--~W-~~i~~--~~~-~~~~~~~~~-~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W 296 (392)
++++|+|-|. ..++||..+. -+ +.|.. .|. .....+++. ..++++|++-| ...|+||..+++
T Consensus 500 ~~k~yFFkG~--~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG--------~~ywryd~~~~~- 568 (631)
T 1ck7_A 500 EEKAVFFAGN--EYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKK- 568 (631)
T ss_dssp TTEEEEEETT--EEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET--------TEEEEEETTTTE-
T ss_pred CCEEEEEecC--EEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC--------CEEEEEcCCccc-
Confidence 6889999774 7899985321 00 11211 111 111222222 24789999874 368899976542
Q ss_pred EecccCCHHHHHhhcCCcccCccceeEEEEe--CCEEEEEecc
Q 016239 297 SEIAIMPHDFLYSLVDTEEDDKFASLKCVGL--GNLIYVFNEE 337 (392)
Q Consensus 297 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~gg~ 337 (392)
....-|..+...|.+... ..-+++.. ++++|++-|.
T Consensus 569 -vd~gYPk~i~~~w~G~p~----~iDAAf~~~~~g~~YFFkG~ 606 (631)
T 1ck7_A 569 -MDPGFPKLIADAWNAIPD----NLDAVVDLQGGGHSYFFKGA 606 (631)
T ss_dssp -ECTTCCEETTTSCSSCCT----TCCEEECCTTSCBCEEEETT
T ss_pred -ccCCCCcchHhhcCCCCC----CCcEeEEEcCCCeEEEEECC
Confidence 222234443333333321 12233333 4799999874
No 307
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=41.83 E-value=2.2e+02 Score=26.48 Aligned_cols=62 Identities=5% Similarity=0.079 Sum_probs=36.4
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
++.+.+.++.++.|..||...+.-..+.... ..........++++++.++.+. .+.+| |...
T Consensus 437 d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~--~~v~~~~~spd~~~las~~~d~----~i~iw--~~~~ 498 (577)
T 2ymu_A 437 DDQTIASASDDKTVKLWNRNGQLLQTLTGHS--SSVRGVAFSPDGQTIASASDDK----TVKLW--NRNG 498 (577)
T ss_dssp TSSEEEEEETTSEEEEEETTSCEEEEEECCS--SCEEEEEECTTSCEEEEEETTS----EEEEE--ETTS
T ss_pred CCCEEEEEcCCCEEEEEECCCCEEEEEcCCC--CCEEEEEEcCCCCEEEEEeCCC----EEEEE--cCCC
Confidence 6777788888889999997655433332211 1111222334788877776443 67788 5443
No 308
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=40.89 E-value=35 Score=30.37 Aligned_cols=26 Identities=4% Similarity=-0.063 Sum_probs=19.4
Q ss_pred CCEEEEEe-ecccEEEEEECCCCceee
Q 016239 224 RGRFYVFG-IYSFSVSSFDLKKHVWSE 249 (392)
Q Consensus 224 ~g~ly~~g-g~~~~i~~yd~~~~~W~~ 249 (392)
++.+|+.. ..++.|++||..++.|..
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp SSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 56777776 357899999998876653
No 309
>2l9b_B MRNA 3'-END-processing protein RNA14; 3' END mRNA maturation, transcription; NMR {Saccharomyces cerevisiae}
Probab=40.38 E-value=16 Score=22.17 Aligned_cols=21 Identities=24% Similarity=0.542 Sum_probs=17.0
Q ss_pred CCcHHHHHHHHhhCChhhHHHh
Q 016239 12 TLSTDITERILSLLPIPTLIRA 33 (392)
Q Consensus 12 ~Lp~dl~~~iL~rLP~~~l~~~ 33 (392)
.+|+|+++ +|+-||-++++.-
T Consensus 6 ~iP~eI~d-LL~vLPKRQYFK~ 26 (53)
T 2l9b_B 6 ELPTEVLD-LLSVIPKRQYFNT 26 (53)
T ss_dssp CCCHHHHH-HHHHSBCGGGGCS
T ss_pred CCCHHHHH-HHHHcchHhhhcc
Confidence 48999987 8999998877643
No 310
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=39.90 E-value=1.9e+02 Score=25.16 Aligned_cols=22 Identities=9% Similarity=-0.079 Sum_probs=14.4
Q ss_pred CEEEEE-eecccEEEEEECCCCc
Q 016239 225 GRFYVF-GIYSFSVSSFDLKKHV 246 (392)
Q Consensus 225 g~ly~~-gg~~~~i~~yd~~~~~ 246 (392)
..+.+. |+..+.|..||..+..
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~ 170 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSG 170 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC--
T ss_pred cEEEEeCCCcCcEEEEEECCCCC
Confidence 444444 6677899999998653
No 311
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=39.50 E-value=2.7e+02 Score=26.92 Aligned_cols=155 Identities=5% Similarity=-0.157 Sum_probs=80.7
Q ss_pred CceeeeeCCCCceeeCCCCCCCCCcceEEe--ecceEEeecC----cceEecCCcCceeec--CCCCcCccCceEEEEEc
Q 016239 78 NQSFAFDPASNSWFHLPPAQEPRAGSCFIG--ANGFFFTTTP----RFGFSRILNTSWHLT--SPLRFSRINPLVGVFYD 149 (392)
Q Consensus 78 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~g~i~v~gg----~~~ynp~~~~~W~~~--~~~~~~r~~~~~~~~~~ 149 (392)
..+..+++.......+..... ....+++. .++.||+... ++++++. ...-+.+ ..+..| ...++ +
T Consensus 59 ~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~~~~~l~~~~l~~P----~~iav-d 131 (628)
T 4a0p_A 59 KTISRAFMNGSALEHVVEFGL-DYPEGMAVDWLGKNLYWADTGTNRIEVSKLD-GQHRQVLVWKDLDSP----RALAL-D 131 (628)
T ss_dssp TEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTTEEEEEETTTTEEEEEETT-STTCEEEECSSCCCE----EEEEE-E
T ss_pred CeEEEEECCCCCcEEEEeCCC-CCcceEEEEeCCCEEEEEECCCCEEEEEecC-CCcEEEEEeCCCCCc----ccEEE-c
Confidence 456666665544333211110 11224555 4788998843 4777775 3322222 223222 22233 1
Q ss_pred CCCCcccccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCC-CCCCCCCCCCCccceeeEEE--CCE
Q 016239 150 HDRGHCDLASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCP-PLPADFRSGYSSQYLSSALF--RGR 226 (392)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~~--~g~ 226 (392)
+. ++.||+.--. ....++..+.....-+.+. .+..| .+.+.- +++
T Consensus 132 p~-------------~G~lY~tD~g----------~~~~I~r~~~dG~~~~~l~~~~~~P---------~GlalD~~~~~ 179 (628)
T 4a0p_A 132 PA-------------EGFMYWTEWG----------GKPKIDRAAMDGSERTTLVPNVGRA---------NGLTIDYAKRR 179 (628)
T ss_dssp TT-------------TTEEEEEECS----------SSCEEEEEETTSCSCEEEECSCSSE---------EEEEEETTTTE
T ss_pred cC-------------CCeEEEeCCC----------CCCEEEEEeCCCCceEEEECCCCCc---------ceEEEccccCE
Confidence 11 6789987310 1236888877655444332 22111 233333 589
Q ss_pred EEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEE
Q 016239 227 FYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAG 274 (392)
Q Consensus 227 ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~g 274 (392)
||+.-...+.|.++|+....=+.+..... ....+++.+++||+..
T Consensus 180 LY~aD~~~~~I~~~d~dG~~~~v~~~~l~---~P~glav~~~~ly~tD 224 (628)
T 4a0p_A 180 LYWTDLDTNLIESSNMLGLNREVIADDLP---HPFGLTQYQDYIYWTD 224 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEECCS---CEEEEEEETTEEEEEE
T ss_pred EEEEECCCCEEEEEcCCCCceEEeeccCC---CceEEEEECCEEEEec
Confidence 99998878899999986543233322111 1224566788998875
No 312
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=38.67 E-value=1.6e+02 Score=25.12 Aligned_cols=59 Identities=8% Similarity=-0.020 Sum_probs=31.7
Q ss_pred cEEEEEECCCCce-eecccCCCCcccceeEEeeCCeEEEEEeecCCCC--C-ceeEEEeecCccceEecc
Q 016239 235 FSVSSFDLKKHVW-SEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRG--P-SFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 235 ~~i~~yd~~~~~W-~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~--~-~~~v~~~d~~~~~W~~~~ 300 (392)
..|+.+|+.+++. ..+.. + . .......-+| |++.+....... . ...+|.+| +.+++.+.
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~--~-~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P--R-FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E--T-TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred ceEEEEECCCCeEEeeecC-C--C-cccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEec
Confidence 4789999988876 55544 2 1 1122223355 555543221111 1 56888888 55555554
No 313
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=38.65 E-value=2.6e+02 Score=26.52 Aligned_cols=61 Identities=11% Similarity=0.074 Sum_probs=35.8
Q ss_pred EEEEeecccEEEEEECCCCceeecccCCCCcc-cceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccc
Q 016239 227 FYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGV-MFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSME 295 (392)
Q Consensus 227 ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~-~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~ 295 (392)
.++.|+.++.|..||..+.+... .+..... ........+|++++.|+.+. .+.+| |..+.+
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D~----~i~lw--d~~~g~ 223 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGDG----TIVLY--NGVDGT 223 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS----CEEEE--ETTTCC
T ss_pred EEEEEeCCCeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECCC----cEEEE--ECCCCc
Confidence 57778888899999987654332 2222111 11222233788888776543 68888 654443
No 314
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=38.29 E-value=52 Score=31.78 Aligned_cols=170 Identities=10% Similarity=0.045 Sum_probs=87.1
Q ss_pred EEEEEeCCCCCeec-CCCCCCCCCCCCCccceeeEEE-CC-EEEEEeecccEEEEEECCCCc-e---------eecccCC
Q 016239 188 AVEIYDPHSDSWEL-CPPLPADFRSGYSSQYLSSALF-RG-RFYVFGIYSFSVSSFDLKKHV-W---------SEVQTLR 254 (392)
Q Consensus 188 ~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~~~~i~~yd~~~~~-W---------~~i~~~~ 254 (392)
.+-+.|..+.+.+. +..+|.+ ... |++.+. +| .+|+.+...+.|.+||..+.+ + ..+...+
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg-~~P-----hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIA-NNP-----HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEE-SSC-----CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred cEEEEeCcccCCceeEEEEecC-CCc-----eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC
Confidence 57788887743333 2223322 111 344433 45 588888788999999998652 1 1112222
Q ss_pred CCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCc------cceEecccCCHHHHHhhcCCcccCccceeEE----
Q 016239 255 PPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELS------MEFSEIAIMPHDFLYSLVDTEEDDKFASLKC---- 324 (392)
Q Consensus 255 ~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~------~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~---- 324 (392)
....-.+....-+|.+|+.-..+. .+.+|.++... +.+..+..++... .-.+.+
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~lds----qV~kwdi~~a~~~~~g~~~~~vi~kidV~y------------qpGh~~~~~g 392 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDS----QVVKWNIEDAIRAYAGEKVDPIKDKLDVHY------------QPGHLKTVMG 392 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTT----EEEEEEHHHHHHHHHTCSCCCEEEEEECSS------------CEEEEEETTT
T ss_pred CCCCcceEEECCCCeEEEEEecCC----cEEEEEhhHhhhhhcccccceeEEEeeccc------------ccccceeccc
Confidence 211112222344677887754322 57778555421 2356666655431 001222
Q ss_pred ---EEeCCEEEEEeccccCC-------CCeEEEEeecCCCccceeeeecCCCCCcccccceEEEeeccc
Q 016239 325 ---VGLGNLIYVFNEEYHKK-------YPACVCEIGTESDKCRCSWRRLPQLPSPVNEFHKVISFCSTV 383 (392)
Q Consensus 325 ---~~~~~~i~v~gg~~~~~-------~~~~~~~~d~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~~ 383 (392)
...|..+|+.++..... .....--+|.+.++ -+.+...|...--|.+.++-.+.|
T Consensus 393 ~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~----m~lv~d~p~~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 393 ETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK----MVLVHDGPTFAEPHDAIAVHPSIL 457 (595)
T ss_dssp TSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS----CEEEEEEEESSCCCCEEEECTTTT
T ss_pred eEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc----EEEEEEEcCCCCCCceEEccHHHc
Confidence 24567788777633111 01111123667777 777777776333466776666666
No 315
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=38.00 E-value=2.2e+02 Score=25.38 Aligned_cols=141 Identities=15% Similarity=0.159 Sum_probs=0.0
Q ss_pred cceEEee---cCcceEecCCcCceeecCCCCcCccCceEEEEEcCCCCcccccCCcccCCCe-------EEEEeceeecC
Q 016239 109 NGFFFTT---TPRFGFSRILNTSWHLTSPLRFSRINPLVGVFYDHDRGHCDLASGFACNLPK-------FIVVGGVRFIG 178 (392)
Q Consensus 109 ~g~i~v~---gg~~~ynp~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------iyv~gG~~~~~ 178 (392)
..+++.. +|.++||.. .+.-+.++. .|.+-.-... +.+ +.++.-.
T Consensus 40 ~s~ii~t~k~~gL~Vydl~-G~~l~~~~~---g~~nnVD~r~-----------------~~~l~g~~~dla~as~R---- 94 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLD-GKMLHSYNT---GKLNNVDIRY-----------------DFPLNGKKVDIAAASNR---- 94 (355)
T ss_dssp GCEEEEEETTTEEEEEETT-SCEEEEECC---SCEEEEEEEE-----------------EEEETTEEEEEEEEEEC----
T ss_pred ccEEEEEcCCCCEEEEcCC-CcEEEEccC---CCcccEEEec-----------------ccccCCceEeEEEEeCC----
Q ss_pred ccccccc--ceEEEEE--eCCCCCeecCCCC--C--CCCCCCCCccceeeEEE----CCEEEEE-eecccEEEEEECCCC
Q 016239 179 GLVDIED--RLAVEIY--DPHSDSWELCPPL--P--ADFRSGYSSQYLSSALF----RGRFYVF-GIYSFSVSSFDLKKH 245 (392)
Q Consensus 179 ~~~~~~~--~~~~~~y--d~~~~~W~~~~~~--~--~~~~~~~~~~~~~~~~~----~g~ly~~-gg~~~~i~~yd~~~~ 245 (392)
. ..++.+| |+.++.++.+... | ...+.. .+.+.+ .+++|++ .+..+.+..|++...
T Consensus 95 ------~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~p-----yGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~ 163 (355)
T 3amr_A 95 ------SEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEV-----YGFTLYHSQKTGKYYAMVTGKEGEFEQYELKAD 163 (355)
T ss_dssp ------STTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSC-----CCEEEEECTTTCCEEEEEECSSSEEEEEEEEEC
T ss_pred ------CCCCCeEEEEEECCCCCceeeccccccCcCCCCCCe-----eEEEEEecCCCCcEEEEEECCCCeEEEEEEEeC
Q ss_pred -----ceeecccCCC-CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecC
Q 016239 246 -----VWSEVQTLRP-PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDEL 292 (392)
Q Consensus 246 -----~W~~i~~~~~-~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~ 292 (392)
+=+.+..+.. ...+.+.+-.-.++||+--. ...||+||.+
T Consensus 164 ~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eE-------d~GIw~~da~ 209 (355)
T 3amr_A 164 KNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEE-------DEAIWKFSAE 209 (355)
T ss_dssp TTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEET-------TTEEEEEECS
T ss_pred CCCcccceEEEEecCCCCcceEEEcCCCCeEEEecc-------cceEEEEeCC
No 316
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=37.41 E-value=1.7e+02 Score=26.67 Aligned_cols=132 Identities=11% Similarity=0.112 Sum_probs=0.0
Q ss_pred cccCCCeEEE---EeceeecCcccccccceEEEEEeCCCC------------CeecCCCCCCCCCCCCCccceeeEEEC-
Q 016239 161 FACNLPKFIV---VGGVRFIGGLVDIEDRLAVEIYDPHSD------------SWELCPPLPADFRSGYSSQYLSSALFR- 224 (392)
Q Consensus 161 ~~~~~~~iyv---~gG~~~~~~~~~~~~~~~~~~yd~~~~------------~W~~~~~~~~~~~~~~~~~~~~~~~~~- 224 (392)
|..++..+++ .|+. ...+.+||..+. ..+........ ...+.++
T Consensus 100 ~spdg~~lav~~~sgs~-----------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~---------V~~v~~~p 159 (434)
T 2oit_A 100 LSCDNLTLSACMMSSEY-----------GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGM---------VIDMKWNP 159 (434)
T ss_dssp ECTTSCEEEEEEEETTT-----------EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGS---------EEEEEECS
T ss_pred EcCCCCEEEEEEeccCC-----------CceEEEEEccccccCCcCCcceeeeeeccCCCCCc---------eEEEEECC
Q ss_pred --CEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEee-CCeEEEEEeecCCCCCceeEEEeecCccceEeccc
Q 016239 225 --GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS-PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSEIAI 301 (392)
Q Consensus 225 --g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~-~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~~~~ 301 (392)
+.+++.++.++.|..||+.+. ..+............+... +|+.++.|+.++ .+.+| |.....-..+..
T Consensus 160 ~~~~~las~s~Dg~v~iwD~~~~--~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg----~v~iw--d~~~~~~~~~~~ 231 (434)
T 2oit_A 160 TVPSMVAVCLADGSIAVLQVTET--VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG----TVVQY--LPTLQEKKVIPC 231 (434)
T ss_dssp SCTTEEEEEETTSCEEEEEESSS--EEEEEEECGGGCEEEEEECTTSSCEEEEETTS----CEEEE--CTTCCEEEEECC
T ss_pred CCCCEEEEEECCCeEEEEEcCCC--cceeeccCCCCceeEEEEcCCCCEEEEEcCCC----cEEEE--ccCCcccccccC
Q ss_pred CCH-------HHHHhhcCCcccCccceeEEEEeCCEEEEEe
Q 016239 302 MPH-------DFLYSLVDTEEDDKFASLKCVGLGNLIYVFN 335 (392)
Q Consensus 302 ~p~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g 335 (392)
... . ..++...++..|+++
T Consensus 232 ~~~~~~~~~~~---------------v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 232 PPFYESDHPVR---------------VLDVLWIGTYVFAIV 257 (434)
T ss_dssp CTTCCTTSCEE---------------EEEEEEEETTEEEEE
T ss_pred CcccCCCCcee---------------EEEEEEecCceEEEE
No 317
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=36.75 E-value=3.3e+02 Score=27.14 Aligned_cols=132 Identities=12% Similarity=0.211 Sum_probs=60.5
Q ss_pred CEEEEEeecccEEEEEECCCCceeecccCCC---CcccceeEEee---CCeEEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 225 GRFYVFGIYSFSVSSFDLKKHVWSEVQTLRP---PGVMFSFLIAS---PNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 225 g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~---~~~~~~~~~~~---~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
+.+|+ +.....|+.=+=.-++|+.+...+. .......++.. .+.||+..... ..||+=.-...+|+.
T Consensus 134 ~~v~~-g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~------~~v~~S~DgG~TW~~ 206 (789)
T 1sqj_A 134 NEVWM-GTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP------QGMYVTHDGGVSWEP 206 (789)
T ss_dssp EEEEE-ECSSSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST------TCEEEESSTTSSCEE
T ss_pred CEEEE-EeccCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC------CeEEEEcCCCcCccc
Confidence 45666 3333444433333468999876441 11222233322 24666654311 345554445678999
Q ss_pred cccCCHHH----HHhhcCCcccCccceeEEE--EeCCEEEEEeccccC---CCCeEEEEeecCCCccceeeeecCCCCC
Q 016239 299 IAIMPHDF----LYSLVDTEEDDKFASLKCV--GLGNLIYVFNEEYHK---KYPACVCEIGTESDKCRCSWRRLPQLPS 368 (392)
Q Consensus 299 ~~~~p~~~----~~~~~~~~~~~~~~~~~~~--~~~~~i~v~gg~~~~---~~~~~~~~~d~~~~~~~~~W~~~~~~p~ 368 (392)
+..+|... ...+-+.. ......+.++ ..++.||+..+.... ...-.++.-+..-.+ |+.+...|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~t----W~~~~~~~~ 280 (789)
T 1sqj_A 207 VAGQPSSWLNRTTGAFPDKK-PASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGA----WDDITPRVG 280 (789)
T ss_dssp CTTCCCSCCHHHHHTSTTCC-CSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCC----EEECCCCTT
T ss_pred CCCCcCccccccccccCccc-ccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCc----eEECcCCCC
Confidence 88665431 00010000 0000112222 228899987432110 112223444444555 999987554
No 318
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=36.16 E-value=1.8e+02 Score=26.68 Aligned_cols=69 Identities=9% Similarity=-0.133 Sum_probs=36.2
Q ss_pred CEEEEEeecc----cEEEEEECCCCceeecccCCCCcccceeEEee-CCeEEEEEeecCC---CCCceeEEEeecCccce
Q 016239 225 GRFYVFGIYS----FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIAS-PNMLVLAGMCNAP---RGPSFNLWKVDELSMEF 296 (392)
Q Consensus 225 g~ly~~gg~~----~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~-~g~l~v~gg~~~~---~~~~~~v~~~d~~~~~W 296 (392)
..+|+..... +.|.++|+.+.+-.. ..+... .....+.- +.+||+....... +.....|.++|..+.+-
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~--~I~vG~-~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILG--MTDGGF-LPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEE--EEEECS-SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEE--EEECCC-CCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 5688886543 689999998875432 222111 11222333 4457776421000 00134677779887653
No 319
>3b23_C Variegin; hydrolase-hydrolase inhibitor complex; 2.40A {Amblyomma variegatum}
Probab=35.51 E-value=13 Score=19.78 Aligned_cols=19 Identities=16% Similarity=0.342 Sum_probs=16.2
Q ss_pred CCCCCCCCcccCCcHHHHH
Q 016239 1 MSDHNPYSAFTTLSTDITE 19 (392)
Q Consensus 1 ~~~~~~~~~~~~Lp~dl~~ 19 (392)
|++.-|...+..+|+|-++
T Consensus 11 M~~~~p~gDFE~IP~~~~~ 29 (32)
T 3b23_C 11 MHKTAPPFDFEAIPEEYLD 29 (32)
T ss_pred ccccCCCCChhhCCHhhhc
Confidence 7788888899999998876
No 320
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=30.01 E-value=4.1e+02 Score=26.15 Aligned_cols=241 Identities=9% Similarity=0.118 Sum_probs=112.0
Q ss_pred CCceeeCCCCCCCCCcceEEee---cceEEee---cCcceEecCCcCceeecCCCCcCc----cCceEEEEEcCCCCccc
Q 016239 87 SNSWFHLPPAQEPRAGSCFIGA---NGFFFTT---TPRFGFSRILNTSWHLTSPLRFSR----INPLVGVFYDHDRGHCD 156 (392)
Q Consensus 87 ~~~W~~~~~~~~~r~~~~~~~~---~g~i~v~---gg~~~ynp~~~~~W~~~~~~~~~r----~~~~~~~~~~~~~~~~~ 156 (392)
..+|..+.+....-.-..++.. .+.||+. ||+++.+-. ..+|+.+.+.+... .....+++ +..
T Consensus 10 ~~~w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~-dp~----- 82 (737)
T 2cn3_A 10 PYKWDNVVIGGGGGFMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIAT-DPV----- 82 (737)
T ss_dssp CEEEEEECCCSBCSCCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEE-CSS-----
T ss_pred CCeeEEcccCCCcceeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEe-CCC-----
Confidence 4568777554322112234432 3678875 356888777 78999876532211 11222222 211
Q ss_pred ccCCcccCCCeEEEEeceeecCcccccccceEEEEEeCCCCCeecCCC-CCCC-CCCCCCccceeeEEE----CCEEEEE
Q 016239 157 LASGFACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWELCPP-LPAD-FRSGYSSQYLSSALF----RGRFYVF 230 (392)
Q Consensus 157 ~~~~~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~-~~~~~~~~~~~~~~~----~g~ly~~ 230 (392)
+.+.+|+..+.... ... .....+++=+=.-.+|+.+.. .+.. ...+ ........+ .+.+|+-
T Consensus 83 -------~~~~v~v~~~~~~~-~~~--~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g--~~~~~~l~~~p~~~~~v~~g 150 (737)
T 2cn3_A 83 -------DPNRVYIVAGMYTN-DWL--PNMGAILRSTDRGETWEKTILPFKMGGNMPG--RSMGERLAIDPNDNRILYLG 150 (737)
T ss_dssp -------STTCEEEEECSCSS-SSS--CCCCEEEEESSSSSSCEEEECSSCCCTTSTT--TTSCCCEEECSSCTTCEEEE
T ss_pred -------CCCEEEEEeccccc-ccc--cCCccEEEeCCCCCCcccCCCCcccCCCcCc--ccccceEEECCCCCCEEEEe
Confidence 04678887652100 000 001123322223468988752 1110 0000 000112233 2567764
Q ss_pred eecccEEEEEECCCCceeecccCCCCcc--------------cceeEEee--C-------CeEEEEEeecCCCCCceeEE
Q 016239 231 GIYSFSVSSFDLKKHVWSEVQTLRPPGV--------------MFSFLIAS--P-------NMLVLAGMCNAPRGPSFNLW 287 (392)
Q Consensus 231 gg~~~~i~~yd~~~~~W~~i~~~~~~~~--------------~~~~~~~~--~-------g~l~v~gg~~~~~~~~~~v~ 287 (392)
......|+.=+=.-.+|+.+..++.... ....++.. + +.||+..... ...||
T Consensus 151 ~~~g~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~-----~~~v~ 225 (737)
T 2cn3_A 151 TRCGNGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADK-----NESIY 225 (737)
T ss_dssp CSTTCCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCS-----SCCEE
T ss_pred eccCCcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCC-----CccEE
Confidence 4221234432223458999875443110 11112211 1 2566643211 12356
Q ss_pred EeecCccceEecccCCHHHHHhhcCCcccCccceeEEEE-eCCEEEEEeccc----cCCCCeEEEEeecCCCccceeeee
Q 016239 288 KVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVG-LGNLIYVFNEEY----HKKYPACVCEIGTESDKCRCSWRR 362 (392)
Q Consensus 288 ~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~gg~~----~~~~~~~~~~~d~~~~~~~~~W~~ 362 (392)
+=.-...+|+.+..+|... ..+.++. .++.+|+..+.. .....-.++..+....+ |+.
T Consensus 226 ~S~DgG~tW~~~~~~p~~~-------------~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~t----W~~ 288 (737)
T 2cn3_A 226 RSTDGGVTWKAVPGQPKGL-------------LPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGE----WID 288 (737)
T ss_dssp EESSTTSCCEECTTCCCSS-------------EEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCC----EEE
T ss_pred EEcCCCCceEECCCCCCcc-------------cceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCC----EEE
Confidence 5444567899998777531 1222232 278899876422 12133344555767777 999
Q ss_pred cCCCCC
Q 016239 363 LPQLPS 368 (392)
Q Consensus 363 ~~~~p~ 368 (392)
+.+.|.
T Consensus 289 i~~~~~ 294 (737)
T 2cn3_A 289 ITPIPY 294 (737)
T ss_dssp CCSSCT
T ss_pred ccCCCC
Confidence 987764
No 321
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=28.65 E-value=4.5e+02 Score=26.17 Aligned_cols=77 Identities=14% Similarity=0.167 Sum_probs=47.2
Q ss_pred CCEEEEEe--------ecccEEEEEECCCCceeecccCCCC---------cc---cceeEEee---CCeEEEEEeecCCC
Q 016239 224 RGRFYVFG--------IYSFSVSSFDLKKHVWSEVQTLRPP---------GV---MFSFLIAS---PNMLVLAGMCNAPR 280 (392)
Q Consensus 224 ~g~ly~~g--------g~~~~i~~yd~~~~~W~~i~~~~~~---------~~---~~~~~~~~---~g~l~v~gg~~~~~ 280 (392)
++.||+.. |..+.|+..+-.-++|+.+...+.. .. ....+++. .+.||+.+......
T Consensus 241 ~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~ 320 (789)
T 1sqj_A 241 PNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPG 320 (789)
T ss_dssp SSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSC
T ss_pred CCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCC
Confidence 78899883 3456788888888899998764331 11 22333332 35677776532111
Q ss_pred CCceeEEEeecCccceEecc
Q 016239 281 GPSFNLWKVDELSMEFSEIA 300 (392)
Q Consensus 281 ~~~~~v~~~d~~~~~W~~~~ 300 (392)
.....+|+=+-...+|+.+.
T Consensus 321 ~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 321 PALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp SSCCCEEEESSTTSSEEEHH
T ss_pred cccccEEEecCCCCCceeCc
Confidence 11256776666678999987
No 322
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=28.56 E-value=2.8e+02 Score=23.92 Aligned_cols=78 Identities=10% Similarity=0.010 Sum_probs=42.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCe-ecCCCCCCCCCCCCCccceeeEEE--CCEEEEEee---cccEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSW-ELCPPLPADFRSGYSSQYLSSALF--RGRFYVFGI---YSFSVS 238 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~~~~--~g~ly~~gg---~~~~i~ 238 (392)
++++|++.... .......+.+||+.+++- +.+ .++.... .+.......++. ++.+|+... ..+.|.
T Consensus 77 ~g~L~v~D~g~------~~~~~~~i~~~d~~tg~~~~~~-~~~~~~~-~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 77 NGIVWMLDNGN------QSKSVPKLVAWDTLNNQLSRVI-YLPPPIT-LSNSFVNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp SSEEEEEECHH------HHTSCCEEEEEETTTTEEEEEE-ECCTTTS-CTTCCCCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred CCcEEEEcCCC------CcCCCCeEEEEECCCCeEEEEE-ECChhhc-ccccccceEEEecCCCEEEEEcCccCCCCeEE
Confidence 57899985210 000123688999988763 222 1211100 000011344444 478999865 567899
Q ss_pred EEECCCCc-eeec
Q 016239 239 SFDLKKHV-WSEV 250 (392)
Q Consensus 239 ~yd~~~~~-W~~i 250 (392)
+||+.+++ |..+
T Consensus 149 v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 149 RVDLQTGLAARVL 161 (343)
T ss_dssp EEETTTCCEEEEC
T ss_pred EEECCCCCEEEEe
Confidence 99997654 4444
No 323
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=27.68 E-value=3.6e+02 Score=24.73 Aligned_cols=109 Identities=14% Similarity=0.156 Sum_probs=62.7
Q ss_pred ceeeEEECCEEEEEeeccc-----EE-EEEEC-----CCC-ceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCce
Q 016239 217 YLSSALFRGRFYVFGIYSF-----SV-SSFDL-----KKH-VWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSF 284 (392)
Q Consensus 217 ~~~~~~~~g~ly~~gg~~~-----~i-~~yd~-----~~~-~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~ 284 (392)
.|+-+.+++.=|.+|-..+ .| +.|-+ -.. .=+.|+..-......+.+-.++|.||+..........-.
T Consensus 286 ~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRgt~~~~~GS 365 (670)
T 3ju4_A 286 VHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTRGDRLGS 365 (670)
T ss_dssp EEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEEEEESCTTSCCC
T ss_pred eeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEEecCcCCCCCcc
Confidence 3778888888888875432 22 22211 111 112233322233344556678999999875443333233
Q ss_pred eEEEeecCccceEecccCCHHHHHhhcCCcccCccceeEEEEeCCEEEEEecc
Q 016239 285 NLWKVDELSMEFSEIAIMPHDFLYSLVDTEEDDKFASLKCVGLGNLIYVFNEE 337 (392)
Q Consensus 285 ~v~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~gg~ 337 (392)
.+-+-+.....|+.+. +|.... ....-++.+||.||+||.+
T Consensus 366 ~L~rs~d~Gq~w~slr-fp~nvH-----------htnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 366 SLHRSRDIGQTWESLR-FPHNVH-----------HTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp EEEEESSTTSSCEEEE-CTTCCC-----------SSCCCEEEETTEEEEEEEC
T ss_pred eeeeecccCCchhhee-cccccc-----------ccCCCcceeCCEEEEEecc
Confidence 3444466777898754 334331 3456778999999999963
No 324
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=27.23 E-value=85 Score=30.30 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=17.9
Q ss_pred ECCEEEEEeecccEEEEEECCC
Q 016239 223 FRGRFYVFGIYSFSVSSFDLKK 244 (392)
Q Consensus 223 ~~g~ly~~gg~~~~i~~yd~~~ 244 (392)
-+|.+|+.-..+..|..+|..+
T Consensus 340 ~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 340 GRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCeEEEEEecCCcEEEEEhhH
Confidence 3678999888888888898866
No 325
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=27.03 E-value=1.6e+02 Score=25.99 Aligned_cols=23 Identities=4% Similarity=-0.133 Sum_probs=19.3
Q ss_pred CCEEEEEeecccEEEEEECCCCc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHV 246 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~ 246 (392)
++.+.+.|+.++.|..+|+.++.
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCEEEEEECCCeEEEEECCCCc
Confidence 67899999999999999986654
No 326
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=26.83 E-value=1.6e+02 Score=24.81 Aligned_cols=62 Identities=8% Similarity=0.096 Sum_probs=37.8
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCC-------CcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecC
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRP-------PGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDEL 292 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~-------~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~ 292 (392)
.+.+|++...++.+..+|...+.-..+...+. ........+.-+|.|||+. + ...+|+|...
T Consensus 184 tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs--E-----~n~~y~f~~~ 252 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS--E-----PNRFYRFTPQ 252 (255)
T ss_dssp TTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE--T-----TTEEEEEEC-
T ss_pred CCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc--C-----CceEEEEEec
Confidence 47899999988999999987663333322211 0111222234488999995 2 3477877653
No 327
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=26.01 E-value=4.8e+02 Score=25.66 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=56.3
Q ss_pred eEEEEEeCCC--CCeecCCCCCCCCCCCCCccceeeEEECCEEEEEeec----------ccEEEEEECCC--------Cc
Q 016239 187 LAVEIYDPHS--DSWELCPPLPADFRSGYSSQYLSSALFRGRFYVFGIY----------SFSVSSFDLKK--------HV 246 (392)
Q Consensus 187 ~~~~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~----------~~~i~~yd~~~--------~~ 246 (392)
+.++..|... +.|..+ .+|.. . .-....++.+|+.... .+.|.+.|+.+ ..
T Consensus 269 ~~~~~~~~~~~~~~~~~l-~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 339 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI-NMPSD--A------TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTS 339 (711)
T ss_dssp EEEEEEECSSSSCEEEEC-CSCTT--C------EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTT
T ss_pred eeEEEEcCCCCCCcceEe-ecCCc--c------eEeeeECCEEEEEECcccccccccCCCCeEEEEECCccccccccccc
Confidence 4566666542 567777 33332 1 1134668999997521 35799999765 36
Q ss_pred eeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCccceEe
Q 016239 247 WSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSMEFSE 298 (392)
Q Consensus 247 W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~~W~~ 298 (392)
|+.+-.+.. ......+...++.|++....+. ...++++|..+..|..
T Consensus 340 ~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~----~~~l~~~~~~~g~~~~ 386 (711)
T 4hvt_A 340 LKILFTPTA-NEVFNFISTTKDRVFLATYDNV----VAKVVTFTLENEQWTK 386 (711)
T ss_dssp CEEEECCCT-TEEEEEEEECSSCEEEEEEETT----EEEEEEECEETTEECC
T ss_pred ceEEECCCC-CCeEEEEEEECCEEEEEEEECC----EEEEEEEECCCCceEE
Confidence 887422222 2223334555778877654332 4567777877777743
No 328
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=25.15 E-value=3.2e+02 Score=25.03 Aligned_cols=56 Identities=11% Similarity=0.091 Sum_probs=38.6
Q ss_pred eEEECCEEEEEeecc------cEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEe
Q 016239 220 SALFRGRFYVFGIYS------FSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGM 275 (392)
Q Consensus 220 ~~~~~g~ly~~gg~~------~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg 275 (392)
.-.++|+||+..-.. ..+.+-+..-+.|+.+.-+....+..--....++.||++|.
T Consensus 344 vkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 344 IKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred hhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 345799999995322 25667777788999986654433333335677999999985
No 329
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=24.89 E-value=86 Score=27.35 Aligned_cols=51 Identities=10% Similarity=-0.032 Sum_probs=32.5
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEe-eCCeEEEEEe
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIA-SPNMLVLAGM 275 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~-~~g~l~v~gg 275 (392)
+|.||+.....+.|.+||+++++...+...+. ...-..++. -+++||+...
T Consensus 258 ~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~-~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 258 DHNIYVGDLAHSAIGVITSADRAYKLLVTDEK-LSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp TCCEEEEEGGGTEEEEEETTTTEEEEEEECGG-GSCEEEEEECTTSCEEEEEC
T ss_pred CCCEEEEccCCCeEEEEECCCCCEEEEEECCc-eecCCeeEECCCCcEEEEeC
Confidence 68899998777899999996666665543221 111122222 3688888864
No 330
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=23.94 E-value=2.1e+02 Score=25.20 Aligned_cols=64 Identities=11% Similarity=-0.073 Sum_probs=39.6
Q ss_pred CCEEEEEeecc-cEEEEEECCCCc---eeecccCCCCcccceeEEee-CCeEEEEEeecCCCCCceeEEEeecCc
Q 016239 224 RGRFYVFGIYS-FSVSSFDLKKHV---WSEVQTLRPPGVMFSFLIAS-PNMLVLAGMCNAPRGPSFNLWKVDELS 293 (392)
Q Consensus 224 ~g~ly~~gg~~-~~i~~yd~~~~~---W~~i~~~~~~~~~~~~~~~~-~g~l~v~gg~~~~~~~~~~v~~~d~~~ 293 (392)
+|.+|+.+... +.|+.+|+.... |-.-.+..........++.. +|+++++... ...++++|..+
T Consensus 147 ~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~------~g~L~~fD~~~ 215 (334)
T 2p9w_A 147 DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG------PRALTAFDVSK 215 (334)
T ss_dssp TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS------SSSEEEEECSS
T ss_pred CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC------CCeEEEEcCCC
Confidence 68999998888 899999997552 43222222233344456665 6666555432 24577778764
No 331
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=22.71 E-value=6.1e+02 Score=25.64 Aligned_cols=24 Identities=13% Similarity=0.275 Sum_probs=19.4
Q ss_pred CCEEEEEeecccEEEEEECCCCce
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVW 247 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W 247 (392)
++...+.|+.++.|..||..+.+-
T Consensus 109 ~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 109 SLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp TCSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcc
Confidence 567777788889999999988764
No 332
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=22.49 E-value=4.6e+02 Score=24.15 Aligned_cols=63 Identities=6% Similarity=0.152 Sum_probs=35.2
Q ss_pred CCEEEEEeecccEEEEEECCCCceeecccCCCCcccceeEEeeCCeEEEEEeecCCCCCceeEEEeecCcc
Q 016239 224 RGRFYVFGIYSFSVSSFDLKKHVWSEVQTLRPPGVMFSFLIASPNMLVLAGMCNAPRGPSFNLWKVDELSM 294 (392)
Q Consensus 224 ~g~ly~~gg~~~~i~~yd~~~~~W~~i~~~~~~~~~~~~~~~~~g~l~v~gg~~~~~~~~~~v~~~d~~~~ 294 (392)
+++..+.|+..+.|..||...+.-..+.... ..........++++++.++.+. .+.+| |....
T Consensus 396 dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~--~~v~~~~~s~d~~~l~~~~~d~----~v~~w--~~~~~ 458 (577)
T 2ymu_A 396 DGQTIASASDDKTVKLWNRNGQLLQTLTGHS--SSVWGVAFSPDDQTIASASDDK----TVKLW--NRNGQ 458 (577)
T ss_dssp TSSCEEEEETTSEEEEECTTCCEEEEEECCS--SCEEEEEECTTSSEEEEEETTS----EEEEE--ETTSC
T ss_pred CCCEEEEEeCCCEEEEEeCCCCEEEEecCCC--CCeEEEEECCCCCEEEEEcCCC----EEEEE--ECCCC
Confidence 5777788888889999996544333322111 1111112233677777765433 57777 55443
No 333
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=20.81 E-value=4.1e+02 Score=22.92 Aligned_cols=182 Identities=7% Similarity=-0.081 Sum_probs=0.0
Q ss_pred cccCCCeEEEEeceeecCcccccccceEEEEEeCC-CCCeecCCCCCCCC-CCCCCccceeeEEE---CCEEEEEeeccc
Q 016239 161 FACNLPKFIVVGGVRFIGGLVDIEDRLAVEIYDPH-SDSWELCPPLPADF-RSGYSSQYLSSALF---RGRFYVFGIYSF 235 (392)
Q Consensus 161 ~~~~~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~~-~~~~~~~~~~~~~~---~g~ly~~gg~~~ 235 (392)
|.+++..+|+.... ...+.+||.. +++.+.+.....+. ... ...+.+ +..+|+.+...+
T Consensus 152 ~spdG~~l~~~~~~-----------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~-----p~~~~~spdg~~l~v~~~~~~ 215 (365)
T 1jof_A 152 FDPTETYLYSADLT-----------ANKLWTHRKLASGEVELVGSVDAPDPGDH-----PRWVAMHPTGNYLYALMEAGN 215 (365)
T ss_dssp ECTTSSEEEEEETT-----------TTEEEEEEECTTSCEEEEEEEECSSTTCC-----EEEEEECTTSSEEEEEETTTT
T ss_pred ECCCCCEEEEEcCC-----------CCEEEEEEECCCCCEEEeeeEecCCCCCC-----CCEeEECCCCCEEEEEECCCC
Q ss_pred EEEEEECC--CCc----eeecccCCCCc-----------ccceeE-EeeCCeEEEEEeecCCCCCceeEEEeecC-ccce
Q 016239 236 SVSSFDLK--KHV----WSEVQTLRPPG-----------VMFSFL-IASPNMLVLAGMCNAPRGPSFNLWKVDEL-SMEF 296 (392)
Q Consensus 236 ~i~~yd~~--~~~----W~~i~~~~~~~-----------~~~~~~-~~~~g~l~v~gg~~~~~~~~~~v~~~d~~-~~~W 296 (392)
.|..|+.. +++ ...+...+... ...... ..-+|+.+++............|..|+.. +.+.
T Consensus 216 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE
T ss_pred eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE
Q ss_pred Ee----cccCCHHHHHhhcCCcccCccceeEEEE---eCCEEEEEeccccCCCCeEEEEeecCCCccceeeeecCCCCCc
Q 016239 297 SE----IAIMPHDFLYSLVDTEEDDKFASLKCVG---LGNLIYVFNEEYHKKYPACVCEIGTESDKCRCSWRRLPQLPSP 369 (392)
Q Consensus 297 ~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~v~gg~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~p~~ 369 (392)
+. +........ ..++.. .|+.||+.+. ....+.++++|.++-+ =...-++|.+
T Consensus 296 ~~~~~~~~~~~~~~~-------------~~a~sp~~~dg~~l~v~~~---~~~~v~v~~~~~~~l~----~~~~~~~~~p 355 (365)
T 1jof_A 296 EKQLFLSPTPTSGGH-------------SNAVSPCPWSDEWMAITDD---QEGWLEIYRWKDEFLH----RVARVRIPEP 355 (365)
T ss_dssp EEEEEEEECSSCCTT-------------CCCEEECTTCTTEEEEECS---SSCEEEEEEEETTEEE----EEEEEECCST
T ss_pred EEeeeeeecCCCCcc-------------cceecCCCcCCCEEEEEEc---CCCeEEEEEEchhhCc----eeeEEEcCCC
Q ss_pred ccccceEEE
Q 016239 370 VNEFHKVIS 378 (392)
Q Consensus 370 ~~~~~~~~~ 378 (392)
.+.-.|+.+
T Consensus 356 ~~~~~~~~~ 364 (365)
T 1jof_A 356 GFGMNAIWY 364 (365)
T ss_dssp TEEEEEEEE
T ss_pred cceeeeEec
No 334
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=20.17 E-value=5.8e+02 Score=24.47 Aligned_cols=69 Identities=14% Similarity=0.148 Sum_probs=38.0
Q ss_pred CCeEEEEeceeecCcccccccceEEEEEeCCCCCee-----cCCCCCCCCCCCCCccceeeEEECCEEEEEeecccEEEE
Q 016239 165 LPKFIVVGGVRFIGGLVDIEDRLAVEIYDPHSDSWE-----LCPPLPADFRSGYSSQYLSSALFRGRFYVFGIYSFSVSS 239 (392)
Q Consensus 165 ~~~iyv~gG~~~~~~~~~~~~~~~~~~yd~~~~~W~-----~~~~~~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~i~~ 239 (392)
++++++.|+.+ .++.+||..++.=. .+..+... ..++...-.+.+...+. ++.++.++.+..
T Consensus 140 DG~~LAsgs~D-----------GtVkIWd~~~~~l~~~~~i~l~ti~~~-~~gh~~~V~sVawSPdg-Laass~D~tVrl 206 (588)
T 2j04_A 140 IESSIVVGNED-----------GELQFFSIRKNSENTPEFYFESSIRLS-DAGSKDWVTHIVWYEDV-LVAALSNNSVFS 206 (588)
T ss_dssp SSSCEEEEETT-----------SEEEEEECCCCTTTCCCCEEEEEEECS-CTTCCCCEEEEEEETTE-EEEEETTCCEEE
T ss_pred CCCEEEEEcCC-----------CEEEEEECCCCccccccceeeeeeecc-cccccccEEEEEEcCCc-EEEEeCCCeEEE
Confidence 66777777652 26889998775310 01111100 01010112344444455 777888889999
Q ss_pred EECCCCc
Q 016239 240 FDLKKHV 246 (392)
Q Consensus 240 yd~~~~~ 246 (392)
+|..++.
T Consensus 207 Wd~~~~~ 213 (588)
T 2j04_A 207 MTVSASS 213 (588)
T ss_dssp ECCCSSS
T ss_pred EECCCCc
Confidence 9997766
Done!