BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016240
(392 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/332 (61%), Positives = 250/332 (75%), Gaps = 1/332 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
+V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ DV+RAV AAR AF G P
Sbjct: 15 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 74
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W RM A ER +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 75 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 134
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AE
Sbjct: 135 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 194
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 195 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 254
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLE+GGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 255 AAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 314
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
+FVE++ A A RVVG+PF +QGPQV++
Sbjct: 315 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDE 346
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 14 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 73
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 74 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 133
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 134 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 193
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 194 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 253
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 254 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 313
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 314 ERSVARAKSRVVGNPFDSKTEQGPQVDE 341
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 420 bits (1079), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/328 (60%), Positives = 246/328 (75%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AF GST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/328 (60%), Positives = 246/328 (75%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/328 (60%), Positives = 246/328 (75%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/328 (60%), Positives = 246/328 (75%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 245/328 (74%), Gaps = 1/328 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTL+LGGKSP I+ DAD+D A E AH+ALFFNQGQ C AGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
E++ A A RVVG+PF +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/336 (55%), Positives = 245/336 (72%), Gaps = 1/336 (0%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD 117
TP +++ YT++ IN ++ +S SG+ FP +P TG+ + V E + D+++AV AAR AF
Sbjct: 11 TPNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFS 70
Query: 118 EGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
G W RM A ER +++ + ADL+ER +A +E+ + GKPF Q+ ++ + RY
Sbjct: 71 LGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRY 130
Query: 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
YAGWADKI G+T P DG Y T HEPIGV GQIIPWNFPLLMF WK+ PAL CGNT+V+
Sbjct: 131 YAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVI 190
Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
K AEQTPLSALY+ L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGST GK
Sbjct: 191 KPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGK 250
Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
++ + A +SNLK VTLELGGKSP I+ DAD+D A E AH +FFNQGQCC AGSR FV
Sbjct: 251 LIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVE 310
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
ES+Y++FV+++ A +R+VG PF +QGPQ+++
Sbjct: 311 ESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDK 346
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/333 (54%), Positives = 239/333 (71%), Gaps = 1/333 (0%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
++ YT++ IN ++ S SGK FP +P T + + V EG+ EDV++AV AAR+AF G
Sbjct: 16 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 75
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PW M A ER +++ + ADL+ER +A +E + GK F + ++ + RY AG
Sbjct: 76 PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 135
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+V+K A
Sbjct: 136 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST GK++
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+ A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR FV ES+
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
YD+FV ++ A K V+G+P G+ QGPQ+++
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDK 348
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/333 (53%), Positives = 236/333 (70%), Gaps = 1/333 (0%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
+K+ +T+L IN ++ +S SGKTFP +P T + I V E + EDV++AV AAR+AF G
Sbjct: 16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGS 75
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PW M A ER ++I + ADL+ER +A LE+ + GK F + ++ + RY AG
Sbjct: 76 PWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAG 135
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKIQG T P DG + T HEPIGV G I PWN P+++ A K+GPAL CGNT+++K A
Sbjct: 136 WADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPA 195
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+AL+V+ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST GK++
Sbjct: 196 EQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQ 255
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+ AAKSNLK VTLELG K+P IV DAD+D A E AH +F NQGQ C A S+ FV E++
Sbjct: 256 EAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAI 315
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
YD+FV+++ A K V G+P G+ GPQ+N+
Sbjct: 316 YDEFVQRSVERAKKYVFGNPLTPGVNHGPQINK 348
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 304 bits (779), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 215/327 (65%), Gaps = 4/327 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
T P + P TL EP+GV G +IPWN+PL+M +WK LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+AL ++L +AG+P GV+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A SN+K V+LELGGKSP I+ D D++KA ++ ++FFN+G+ C A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
FV+K K +G+P + GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 215/327 (65%), Gaps = 4/327 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
T P + P TL EP+GV G +IPWN+PL+M +WK LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+AL ++L +AG+P GV+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A SN+K V+L+LGGKSP I+ D D++KA ++ ++FFN+G+ C A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
FV+K K +G+P + GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 302 bits (773), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 214/327 (65%), Gaps = 4/327 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
T P + P TL EP+GV G +IPWN+PL+M +WK LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+AL ++L +AG+P GV+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A SN+K V+L LGGKSP I+ D D++KA ++ ++FFN+G+ C A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
FV+K K +G+P + GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 301 bits (770), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 214/327 (65%), Gaps = 4/327 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
T P + P TL EP+GV G +IPWN+PL+M +WK LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+AL ++L +AG+P GV+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A SN+K V+LELGGKSP I+ D D++KA ++ ++FFN+G+ A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
FV+K K +G+P + GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 300 bits (769), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 214/327 (65%), Gaps = 4/327 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
T P + P TL EP+GV G +IPWN+PL+M +WK LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+AL ++L +AG+P GV+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A SN+K V+LELGGKSP I+ D D++KA ++ ++FFN+G+ A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
FV+K K +G+P + GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 298 bits (763), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 213/327 (65%), Gaps = 4/327 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
T P + P TL EP+GV G +IPWN+PL+M +WK LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+AL ++L +AG+P GV+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A SN+K V+L LGGKSP I+ D D++KA ++ ++FFN+G+ A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
FV+K K +G+P + GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 263 bits (673), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 198/330 (60%), Gaps = 2/330 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 2 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 59
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 60 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 119
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
I+G P V T EP+GV I WN+P+ + WK PALA GN ++ K +E
Sbjct: 120 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 179
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL ++++ EAG+P GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 180 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 239
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF+ GQ C G+R F+H S
Sbjct: 240 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 299
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
+F K + +GDP GP V+
Sbjct: 300 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 329
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 263 bits (673), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 198/330 (60%), Gaps = 2/330 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 61 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
I+G P V T EP+GV I WN+P+ + WK PALA GN ++ K +E
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL ++++ EAG+P GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF+ GQ C G+R F+H S
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 300
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
+F K + +GDP GP V+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 330
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 197/330 (59%), Gaps = 2/330 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 2 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 59
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 60 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 119
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
I+G P V T EP+GV I WN+P+ + WK PALA GN ++ K +E
Sbjct: 120 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 179
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL ++++ EAG+P GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 180 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 239
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A+ S+LK VT+ LGGKSP I+ DAD+D+AA++A A FF+ GQ C G+R F+H S
Sbjct: 240 ASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 299
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
+F K + +GDP GP V+
Sbjct: 300 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 329
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 197/330 (59%), Gaps = 2/330 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 61 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
I+G P V T EP+GV I WN+P+ + WK PALA GN ++ K +E
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL ++++ EAG+P GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF+ GQ G+R F+H S
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQA 300
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
+F K + +GDP GP V+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 330
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 197/330 (59%), Gaps = 2/330 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 61 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
I+G P V T EP+GV I WN+P+ + WK PALA GN ++ K +E
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL ++++ EAG+P GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF+ GQ G+R F+H S
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQA 300
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
+F K + +GDP GP V+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 330
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/330 (41%), Positives = 192/330 (58%), Gaps = 6/330 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I+G++ + P ++P T ++I + AEDV AV AAR+AF W +
Sbjct: 9 QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R+ + A + D LET D+GKPF++ A ++ F Y+AG A+ + G
Sbjct: 69 AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDE-AVLDIDDVASCFEYFAGQAEALDG 127
Query: 187 -LTAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
AP P + L +P+GV G I PWN+PLLM WK+ PALA G T VLK +E
Sbjct: 128 KQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELA 187
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
++ L ++ +E GLPPGVLNI++G GP AGA L SH +VDK+AFTGS+ TG V+ A
Sbjct: 188 SVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASA 247
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A+ +KPVTLELGGKSP +V ED D+DK E + F+ GQ C A SR VHES+ +
Sbjct: 248 AQL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 306
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
FV+K + DPF+ G + GP +++
Sbjct: 307 FVDKLVKWTKNIKISDPFEEGCRLGPVISK 336
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 244 bits (622), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 194/324 (59%), Gaps = 5/324 (1%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
I G+FV S SG+TFP+LDP T +V+ A G +V+RA AA +AF W R A E
Sbjct: 30 FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR--WSRTKAKE 87
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGL 187
R + +LR A+L+E+H DE+A +E D G+ + + +V F +YA +A+ ++
Sbjct: 88 RKRYLLRIAELIEKHADELAVMECLDAGQVL-RIVRAQVARAAENFAFYAEYAEHAMEDR 146
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
T P D + T+ P G G I PWN PL++ W++ PALA GNT+VLK AE +P +A
Sbjct: 147 TFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++++L EA LPPGV N+V G+G AGAAL +H V L TG T TGKIV++ AA +L
Sbjct: 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHL 265
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K ++ ELGGKSP +V DAD+++A + + +F G+ C A SR V E +++ FV K
Sbjct: 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKV 325
Query: 368 NALAMKRVVGDPFKGGIQQGPQVN 391
A VG P + GP ++
Sbjct: 326 VERARAIRVGHPLDPETEVGPLIH 349
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/324 (39%), Positives = 197/324 (60%), Gaps = 5/324 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V+SA+ T ++P +VI V+EG ED RA+ AAR+AF+ G W + TA R
Sbjct: 37 IDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETR 96
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
K + AD ++ H + +A LET D GK E+S ++ +F Y+AG ADK G
Sbjct: 97 GKKVRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNVFMYFAGLADKDGGEMI 155
Query: 190 PADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248
+ P + + EP+GV QI PWN+PLL +WK+ PALA G ++V+K +E TPL+ +
Sbjct: 156 DSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIR 215
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
V +L+ E G P G +N++ G G G ++ H EVD ++FTG TGK +++ AA +N+
Sbjct: 216 VFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-NNVT 274
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
+ LELGGK+P I+ +DAD + A + A +F+ GQ C AGSR V S+ D+F E+A
Sbjct: 275 NIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKF-EQAL 333
Query: 369 ALAMKRV-VGDPFKGGIQQGPQVN 391
+K++ +G+ F + GP ++
Sbjct: 334 IDRVKKIKLGNGFDADTEMGPVIS 357
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 192/333 (57%), Gaps = 9/333 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP---WPR 123
QL ING + K P ++P T ++I + EDV+ AV+AA+ A W
Sbjct: 9 QLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWAT 68
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ R++ + A + E+A LE+ D GKP +++A ++ F YYA A+K
Sbjct: 69 ASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEK 127
Query: 184 IQGL-TAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
+ AP P + L EPIGV G I PWN+P+LM WKV PALA G +LK +
Sbjct: 128 LDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPS 187
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
E L+ L + ++ E GLPPGVLNI++G GP AGA LA+H +VDK+AFTGS+ TG ++
Sbjct: 188 ELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM 247
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
AA+ +KPV+LELGGKSP +V ED D+DKAAE A + F+ GQ C A SR +HES+
Sbjct: 248 TAAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI 306
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
+F+ + + DP + G + GP V++
Sbjct: 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSE 339
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 188/327 (57%), Gaps = 5/327 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +TA
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +I G
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 127
Query: 187 LTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
T P + + +PIGV I PWNFP M K GPALA G T+VLK A QTP S
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++ AK
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 246
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F E
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
K K +GD G+ GP +++
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDE 333
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 188/327 (57%), Gaps = 5/327 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +TA
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +I G
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 127
Query: 187 LTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
T P + + +PIGV I PWNFP M K GPALA G T+VLK A QTP S
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++ AK
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 246
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F E
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
K K +GD G+ GP +++
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDE 333
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 194/340 (57%), Gaps = 11/340 (3%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
+ V QL I+G++ K P ++P T ++I + EDV+ AV AA++A
Sbjct: 3 ITVSSRQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKN 62
Query: 120 --PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W + R++ + A ++ DE+ LE+ D GKP E+ A ++ F YY
Sbjct: 63 GRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEE-ALADLDDVVACFEYY 121
Query: 178 AGWADKIQG-----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 232
AG A+++ ++ P D + L EPIGV I PWN+P LM WK+ PALA G
Sbjct: 122 AGLAEELDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGC 180
Query: 233 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292
+LK +E ++ L + ++ E GLP GVLNIV+G G AGA+LASH +VDK++FTGS+
Sbjct: 181 AAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSS 240
Query: 293 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
TG ++ AA+ +KPV+LELGGKSP +V ED D+DK AE + FF GQ C A SR
Sbjct: 241 ATGSKIMTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSR 299
Query: 353 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
VHES+ +FV+K A + DP + G + GP V++
Sbjct: 300 LIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSE 339
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 189/327 (57%), Gaps = 11/327 (3%)
Query: 72 GQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
G+ + S G T P +P TG V+ + AE+V++AV +A+ A+ + W +M ERS
Sbjct: 26 GRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGIERS 83
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
+++L A ++ D IA LE +NGK + A+ ++ + YYAG A + G
Sbjct: 84 RVMLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGLAPTLSGQHIQ 142
Query: 191 ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 250
G T EP+GV I+ WN+P ++ AWK PALACGN +V K + TP++ + ++
Sbjct: 143 LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 251 KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 310
++ HEAG+P G++N+V G G G+ L H V K++FTGS TGK V++++AK+ +K V
Sbjct: 203 EIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT-VKHV 260
Query: 311 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 370
TLELGGKSP ++ +D +++ A A A F QGQ C G+R FV + QF+E+
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKR 320
Query: 371 AMKRVVGDPF-----KGGIQQGPQVNQ 392
VVGDP GG+ PQ+++
Sbjct: 321 TKAIVVGDPLLTETRMGGLISKPQLDK 347
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 193/340 (56%), Gaps = 9/340 (2%)
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
P V QL ++G++ A G+ P ++P T I + G AEDV+ AV+AAR A
Sbjct: 19 PAMVPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRN 78
Query: 120 ---PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
W R R+K + A + E+A LE D GKP++++A ++ F Y
Sbjct: 79 RGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAW-DMDDVAGCFEY 137
Query: 177 YAGWADKI-QGLTAPADGPYHVQTLH---EPIGVAGQIIPWNFPLLMFAWKVGPALACGN 232
+A A+ + + +P P H EPIGV G I PWN+PLLM WK+ PALA G
Sbjct: 138 FADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGC 197
Query: 233 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292
T VLK +E ++ L ++ + E GLP GVLNIV+G GP AGA L++H +VDK+AFTGS
Sbjct: 198 TAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSF 257
Query: 293 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
TGK ++ AA +KPVTLELGGKSP +V +D D+DKA E + F+ GQ C A SR
Sbjct: 258 ETGKKIMASAAPM-VKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSR 316
Query: 353 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
+H + +F E+ A A V DP + G + GP V++
Sbjct: 317 LLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSE 356
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 176/303 (58%), Gaps = 12/303 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
TQLLI +F ++ + L+PRTG I +AE ++ AV AA +AF W + T
Sbjct: 26 TQLLIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTT 82
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ERS +L+ AD +E+ DE AALE + GKP E+P +R++AG ++
Sbjct: 83 PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAG---AVR 139
Query: 186 GLTAPADGPY---HVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
L APA G Y H + +PIG+ G I PWN+PL AWK+ PA+ GNT+V K +EQ
Sbjct: 140 NLHAPAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQ 199
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL +++L+ + LP GV+N+++G G T G AL +H +V ++ TG TGK VL
Sbjct: 200 TPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAA 258
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AAK+ +K LELGGK+P IV DAD++ ++N GQ C A R + +Y+
Sbjct: 259 AAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYE 317
Query: 362 QFV 364
+ V
Sbjct: 318 KLV 320
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 187/343 (54%), Gaps = 7/343 (2%)
Query: 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
+DP V + QL I G++ + P ++P T ++I + AEDV+ AV AAR
Sbjct: 12 QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
KA W T +R+K + A + +A LE+ D+GK +SA ++
Sbjct: 72 KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESA-ADMDDVAGC 130
Query: 174 FRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229
F YYAG A+ + P + Y L EP+GV G I PWN+PLLM WKV PALA
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289
G +LK +E ++ L + ++ E GLP G LNI++G GP AG LASH VDK++FT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 290 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALFFNQGQCCC 348
GS TG ++ AA+ +KPV+LELGGKSP +V +D D +D AAE + +F N GQ C
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
A SR V E++ F+++ + DP + + GP V+
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVS 352
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 201/334 (60%), Gaps = 5/334 (1%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
+K Y Q L++G+ VD+ASG T + P G+V+ E A+DV +AV+AARKAFD G
Sbjct: 19 IKSRY-QXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG 77
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWPR + ERS++ + ADL+ +E+A +E+ + GKP Q A+ E+ L+ Y AG
Sbjct: 78 PWPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQ-ARGEIGFCADLWSYAAG 136
Query: 180 WADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
A ++G T G + L EP+GV G I PWNFP ++ + +V A+ G T+VLK
Sbjct: 137 QARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKP 196
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
+E T +++ +++L EAG+P GV N+V+GYG AG LA VD +AFTGS G +
Sbjct: 197 SEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKL 256
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
++AA++ +K V LELGGK P IV DAD+D AA+ Y ++ N GQCC +GSR V E
Sbjct: 257 GEIAART-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEG 315
Query: 359 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
+ D E+ ++ K GDP + G +++
Sbjct: 316 IRDALXERLLDISRKVAFGDPLNERTKIGAXISE 349
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 186/343 (54%), Gaps = 7/343 (2%)
Query: 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
+DP V + QL I G++ + P ++P T ++I + AEDV+ AV AAR
Sbjct: 12 QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
KA W T +R+K + A + +A LE+ D+GK +SA ++
Sbjct: 72 KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESA-ADMDDVAGC 130
Query: 174 FRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229
F YYAG A+ + P + Y L EP+GV G I PWN+PLLM WKV PALA
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289
G +LK +E ++ L + ++ E GLP G LNI++G GP AG LASH VDK++FT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 290 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALFFNQGQCCC 348
GS TG ++ AA+ +KPV+L LGGKSP +V +D D +D AAE + +F N GQ C
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
A SR V E++ F+++ + DP + + GP V+
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVS 352
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 184/323 (56%), Gaps = 6/323 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+LLING+ V S G+ P +P TGDV+ +AE AE V+ AV AA AF E W + T
Sbjct: 25 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTP 81
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R++ +L+ AD++E + A LE+ + GKP + E+P +FR++AG A + G
Sbjct: 82 KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG 141
Query: 187 LTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
L A H + +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E TPL+
Sbjct: 142 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 201
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ ++ A S
Sbjct: 202 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-S 259
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
++K +ELGGK+P IV +DAD++ E ++N GQ C A R + + +YD VE
Sbjct: 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVE 319
Query: 366 KANALAMKRVVGDPFKGGIQQGP 388
K A G P + GP
Sbjct: 320 KLGAAVATLKSGAPDDESTELGP 342
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 182/328 (55%), Gaps = 7/328 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAE-GEAEDVNRAVSAARKAFDEGPWPRMT 125
Q I G++ + S TF DP TG+ + V + G AE +A W T
Sbjct: 14 QAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG---WRMKT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R+ DL+ ++D++A + T + GKP + A+ E+ ++A ++
Sbjct: 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKRVA 129
Query: 186 GLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P D + + EPIGV I PWNFP M A KVGPALA G IV+K AE TP
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SAL ++ L AG+P GVL++V G G + S+ V KL+FTGST G++++ +A
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP 249
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+ +K +TLELGG +PFIV +DAD+D A E A + + N GQ C +R FVHE VYD F
Sbjct: 250 T-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
+K A K VG + G GP +N+
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINE 336
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 178/325 (54%), Gaps = 6/325 (1%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
I+G +V+ +G F ++ P TG++I + V RA+++A++A E W M+
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKE--WAAMSPMA 75
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQGL 187
R +I+ R AD++ ND ++ LET D GKP +++ + F ++ G A + G
Sbjct: 76 RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P G + T P+GV I WN+P + WK PAL GN +V K +E TPL AL
Sbjct: 136 YIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGAL 194
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++++L EAGLP G+ N++ G T G L +H +V K++ TGS TG+ V AA +L
Sbjct: 195 KIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKV-AAAAAGHL 252
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K VT+ELGGKSP IV +DAD++ A A F++ GQ C G+R FV + +F+E
Sbjct: 253 KHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENL 312
Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
++GDP GP V++
Sbjct: 313 KRRTEAMILGDPLDYATHLGPLVSK 337
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 178/326 (54%), Gaps = 6/326 (1%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W + A
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + + + + EI+AL + GK +Q A+ EV T Y A WA + +G
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+D P ++ +GV I+PWNFP + A K+ PAL GNTIV+K +E TP +A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+ +K++ E GLP GV N+V G G T G LA + +V ++ TGS + G+ ++ AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV +
Sbjct: 245 ITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 367 ANALAMKRVVGDPF-KGGIQQGPQVN 391
G+P + I GP +N
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLIN 330
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 178/326 (54%), Gaps = 6/326 (1%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W + A
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + + + + EI+AL + GK +Q A+ EV T Y A WA + +G
Sbjct: 67 ERASWLRKISAGIRERATEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+D P ++ +GV I+PWNFP + A K+ PAL GNTIV+K +E TP +A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+ +K++ E GLP GV N+V G G T G LA + +V ++ TGS + G+ ++ AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 367 ANALAMKRVVGDPF-KGGIQQGPQVN 391
G+P + I GP +N
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLIN 330
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 178/326 (54%), Gaps = 6/326 (1%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W + A
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + + + + EI+AL + GK +Q A+ EV T Y A WA + +G
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+D P ++ +GV I+PWNFP + A K+ PAL GNTIV+K +E TP +A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+ +K++ E GLP GV N+V G G T G LA + +V ++ TGS + G+ ++ AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 367 ANALAMKRVVGDPF-KGGIQQGPQVN 391
G+P + I GP +N
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLIN 330
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 186/328 (56%), Gaps = 5/328 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+Q L+NG+++D+A G T +P G VI V + A+ A+ KA W T
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKT 90
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ ++ DL+ + D+IA + T + GKP + A+ EV ++A A ++
Sbjct: 91 AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKRVY 149
Query: 186 GLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T PA + + +P+GV I PWNFP M K PALA G T++++ A+ TPL
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL + L +AG+P GVL IV+G GA L S+ V KL+FTGST G++++ A
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP 269
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+ +K ++LELGG +PFIV +DAD+D A + A + + N GQ C +R +V VYD+F
Sbjct: 270 T-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
EK A + VG+ + G+ GP + +
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEE 356
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 170/325 (52%), Gaps = 5/325 (1%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
I GQ+V S T L P TG VI + G D A+ A+ A W ++TA
Sbjct: 16 FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLTART 73
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R ++ FA+ + + +A + + GK A+ EV +T Y A I+G
Sbjct: 74 RQNMLRTFANKIRENKHILAPMLVAEQGKLL-SVAEMEVDVTATFIDYGCDNALTIEGDI 132
Query: 189 APADGPYHVQTLHE-PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P+D +H+ P GV I WNFPL + K+GPAL GNT+VLK ++TPL+
Sbjct: 133 LPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+ ++ EAGLP GVLN+++G G G L + TGST GK + + +A+ +
Sbjct: 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY-M 251
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
PV LELGGK+P +V +DAD+DKAAE A + F N GQ C R +VH SVYD+F+ K
Sbjct: 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKF 311
Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
L VGDP Q GP+ NQ
Sbjct: 312 LPLVKGLKVGDPMDADSQMGPKCNQ 336
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 197/334 (58%), Gaps = 15/334 (4%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T + G+++ +A+ TFP DP +G + VA+ + AV AA +AF W ++
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A ++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 G--LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
G + PA L +PIGVA I PWNFP M KVG ALA G T+V+K AE TP
Sbjct: 128 GDIIHTPAK-DRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTA---GAALASHMEVDKLAFTGSTTTGKIVLQ 300
SAL +++L +AG+P GV N++ A G A+ + V K++FTGSTTTGKI+L
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
AA S +K V++ELGG +PFIV + A+VD+A A + F N GQ C ++ V ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 305
Query: 361 DQFVEKANALAMKR--VVGDPFKGGIQQGPQVNQ 392
D FV KA A AMK+ VG+ F+ G QGP +N+
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINE 338
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 196/334 (58%), Gaps = 15/334 (4%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T + G+++ +A+ TFP DP +G + VA+ + AV AA +AF W ++
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A ++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 G--LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
G + PA L +PIGVA I PWNFP M KVG ALA G T+V+K AE TP
Sbjct: 128 GDIIHTPAK-DRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTA---GAALASHMEVDKLAFTGSTTTGKIVLQ 300
SAL +++L +AG+P GV N++ A G A+ + V K++FTGSTTTGKI+L
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
AA S +K V++ELGG +PFIV + A+VD+A A + F N GQ ++ V ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIH 305
Query: 361 DQFVEKANALAMKR--VVGDPFKGGIQQGPQVNQ 392
D FV KA A AMK+ VG+ F+ G QGP +N+
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINE 338
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 174/329 (52%), Gaps = 7/329 (2%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
DYT+ ING++V+S S +T ++P T +VI VA+G DV++AV AA + E +
Sbjct: 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ ER ++ + E D+I T + G P S + F D
Sbjct: 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFVAARDALDN 123
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
+ D + E IGV+G I PWNFP + K+ A A G+ +VLK +E+TP
Sbjct: 124 YEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
+A+ ++++ + G+P GV N+V+G G G L+ H +V +FTGS TG + + AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA 239
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
K + K V+LELGGKSP+IV +D D+ +AA+ + N GQ C AG+R V + D F
Sbjct: 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
+ + + VG+P + G Q GP +++
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISK 327
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 179/334 (53%), Gaps = 4/334 (1%)
Query: 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
P ++ + ING + D ++ +DP T + ++ G D ++A++AA+KAF
Sbjct: 19 PGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ- 77
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
W + +ER + + ++ E+ + ++A + + G P + + + + R +
Sbjct: 78 -TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFI 136
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
+ A +G ++ IGV G I PWN+P+ KV PAL G T+VLK
Sbjct: 137 KAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKP 196
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
+E PLSA+ +++L EA LP GV N+++G G G+ L++H +++ ++FTGST GK +
Sbjct: 197 SEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
+ A+ + LK V LELGGK I+ DAD+D A + F+N GQ C A +R V ++
Sbjct: 257 SKNASNT-LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQA 314
Query: 359 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
+YD+ ++ A +A K VG + G GP V++
Sbjct: 315 IYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSK 348
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 176/332 (53%), Gaps = 6/332 (1%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+D T+ LI GQ+V+ S + ++P VI + DV+ A AA+KA + W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKA--QAEWA 67
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
A ERS II R A+LLE H +EI ++G A E+ + + + A +
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGST-RSKANLEITLAGNITKESASFPG 126
Query: 183 KIQGLTAPADGPYHVQTLHE-PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
++ G +P++ P ++ GV G I PWNFPL + V PALA GN +V+K A
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 242 TPLSALYV-SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
TP++ + +++ EAG+P GV++ V+G G G +H ++FTGST G+ V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 301 LAAKSN-LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LA +K V LELGG +PF+V DAD+D AA+ A F +QGQ C + +R V +V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
+D+F+EK GDP G GP +N
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVIN 338
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 168/330 (50%), Gaps = 4/330 (1%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+Y +L I G++ ++ P TG+ + V A DV+ AV+AAR AFD GPWP
Sbjct: 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPS 66
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ER+ +I +L D L + G+P + Y+AG ADK
Sbjct: 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 184 IQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
+ T G Y + EP+GV G I+ WN PL + K+ PAL G TIVLK A +T
Sbjct: 127 VT-WTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+A ++++ E GLP GVL++V G G G AL S+ ++D FTGS+ G+ V + A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A+ LKP TLELGGKS I+ ED D+ A + ++ N GQ C +R S YD+
Sbjct: 245 AEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
V VG P Q GP +++
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISE 333
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 167/325 (51%), Gaps = 7/325 (2%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD-EGPWPRMTAYE 128
I G++ DSA G TF +P TG VI V EDV AV A + A PWP T
Sbjct: 16 IGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET--- 72
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R K + D L+ + +EI + ++GKP+++ AQ EV F Y A + T
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCXEHGKPWKE-AQGEVDYAAGFFDYCAKHISALDSHT 131
Query: 189 APADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P T+H P+GV G I+PWNFP+ A K+ ALA G V+K A +TPL+ +
Sbjct: 132 IPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXI 191
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+ + LP G +N+V G G L H +V L+FTGST G+ ++ A+ +
Sbjct: 192 AFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAE-QV 250
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K + LELGG +PFIV +DAD++ AA+ F GQ C +R FVHE V D F +K
Sbjct: 251 KKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKL 310
Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
K VGD GI GP +N+
Sbjct: 311 AERVNKXTVGDGXNDGIDIGPLINK 335
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 172/336 (51%), Gaps = 20/336 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+ING+ V + + +P R ++ V++ + +A+ +A +AF W +
Sbjct: 40 LIINGERVTTED--KIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNP 95
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-- 184
ER+ I+++ A ++ R E +A + GKP+++ A + YYA ++
Sbjct: 96 EERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKE-ADADTAEAIDFLEYYARQMIELNR 154
Query: 185 --QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQ 241
+ L+ P + + T P+GV I PWNF L +M V P + GNT+VLK A
Sbjct: 155 GKEILSRPGEQNRYFYT---PMGVTVTISPWNFALAIMVGTAVAP-IVTGNTVVLKPAST 210
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TP+ A ++L +AGLP GV+N V G G G L H + + FTGS G + +
Sbjct: 211 TPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270
Query: 302 AA-----KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
AA +++LK V +E+GGK +V DAD+D AAE + F GQ C AGSR +H
Sbjct: 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH 330
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
+ VYD+ +EK ALA VGDP GP +++
Sbjct: 331 KDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDE 366
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 165/319 (51%), Gaps = 12/319 (3%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+L NG++V+S +G+ P +G + + E+VN A+ A+ A + W
Sbjct: 13 NILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA--QKIWKIRPI 70
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+ER ++ +ADLLE + I L + KP ++SA EV T + R+ A A ++ G
Sbjct: 71 HERVDLLYAWADLLEERKEIIGELIMHEVAKP-KKSAIGEVSRTADIIRHTADEALRLNG 129
Query: 187 LTAPAD----GPYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
T D G L EP+GV I P+N+P+ + A K+ PAL GNT+V K A
Sbjct: 130 ETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPAT 189
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
Q LS + + + L +AG P G++ +V+G G G L H +D + FTG TTTG+ +
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE---R 246
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
++ K+ + PV LELGGK P IV +DAD+ A F GQ C A R FV +SV
Sbjct: 247 ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA 306
Query: 361 DQFVEKANALAMKRVVGDP 379
DQ V L + VG P
Sbjct: 307 DQLVANIKELVEQLTVGSP 325
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 164/332 (49%), Gaps = 12/332 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I+G+ ++ + +++P +V+ V++ + +A+ AA KAF+ W
Sbjct: 40 LVIDGERYETEN--KIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFE--TWRYTDP 95
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-Q 185
ER+ ++ R + R E +AL + GKP+ + A + YYA ++ +
Sbjct: 96 EERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNE-ADADTAEAIDFMEYYARQMIELAK 154
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G + Q ++ P GV I PWNF + A + GNT+VLK A P+
Sbjct: 155 GKPVNSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVI 214
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK- 304
A ++L E+GLP GV+N V G G G L H + + FTGS G + + AAK
Sbjct: 215 AAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKV 274
Query: 305 ----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
++LK V E+GGK +V ED D++ AA+ + F GQ C AGSR VHE VY
Sbjct: 275 QPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVY 334
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
D+ +++ + + VG+P + GP ++Q
Sbjct: 335 DEVLKRVIEITESKKVGEPDSADVYMGPVIDQ 366
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 7/327 (2%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
ING++ SG+T L+P VIT + + + A A+KA E W + T +
Sbjct: 10 FINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAKSTTED 67
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R ++ + L + D+I + + G +S E+ T + + ++ G+
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVK 126
Query: 189 -APADGPYHVQTLHE-PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
P+D ++ P+GV I P+NFP+ + + PA+A GN++V K QT +S
Sbjct: 127 EVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISG 186
Query: 247 -LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
++K AGLP GVLN++ G + ++ ++FTGST G+ + ++A ++
Sbjct: 187 GTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
K + LELGG +PF V DADVD+A + A + F +QGQ C +R VH+ VYD+FVE
Sbjct: 247 -FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVE 305
Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
K A + GD GP +N+
Sbjct: 306 KFTARVKQLPYGDQTDPKTVVGPLINE 332
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 167/327 (51%), Gaps = 14/327 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+G++++ + ++P + +VI + E+ A+ A K + +
Sbjct: 2 MFIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKY--KEVMKNLPIT 56
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
+R I++ A ++ +E+A + D GKP +Q A+ EV + F+ A + + +
Sbjct: 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKEHRDE 115
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P+D + T EP+G+ G I P+NFPL + A K+ PA+A GN IV + + PL +
Sbjct: 116 VIPSDDRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174
Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
++K++ A +P GV N+++G G G + + +V+ ++FTGS+ G+++ +
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK--- 231
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
K+ K + LELGG +P IV +DAD++KA F GQ C + V ES+ D+F
Sbjct: 232 KAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQV 390
+E A VG+P GP +
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLI 318
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 160/317 (50%), Gaps = 16/317 (5%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
+NG++ S +P +G + V E+V+ ++A+KA + W ++ ER
Sbjct: 9 VNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSYIER 64
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +++G
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 190 PADGPYHVQT-------LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
G + + EP+G+ I P+N+P+ + K+ PAL GN I K Q
Sbjct: 124 EG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
+S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ + ++A
Sbjct: 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV D+
Sbjct: 243 G---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 363 FVEKANALAMKRVVGDP 379
VEK + +G+P
Sbjct: 300 LVEKIREKVLALTIGNP 316
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 160/317 (50%), Gaps = 16/317 (5%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
+NG++ S +P +G + V E+V+ ++A+KA + W ++ ER
Sbjct: 9 VNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSYIER 64
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +++G
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 190 PADGPYHVQT-------LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
G + + EP+G+ I P+N+P+ + K+ PAL GN I K Q
Sbjct: 124 EG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
+S L +++ EAGLP GV N ++G G G + H V+ + F+GST G+ + ++A
Sbjct: 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMA 242
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV D+
Sbjct: 243 G---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 363 FVEKANALAMKRVVGDP 379
VEK + +G+P
Sbjct: 300 LVEKIREKVLALTIGNP 316
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 159/317 (50%), Gaps = 16/317 (5%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
+NG++ S +P +G + V E+V+ ++A+KA + W ++ ER
Sbjct: 9 VNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSYIER 64
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +++G
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 190 PADGPYHVQT-------LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
G + + EP+G+ I P+N+P+ + K+ PAL GN I K Q
Sbjct: 124 EG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
+S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ + ++A
Sbjct: 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
++P+ L LGGK IV EDAD++ A+ F GQ C A R V ESV D+
Sbjct: 243 G---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 363 FVEKANALAMKRVVGDP 379
VEK + +G+P
Sbjct: 300 LVEKIREKVLALTIGNP 316
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 160/324 (49%), Gaps = 6/324 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING++V+S + + ++P T +V+ V ED++ A A +AF W ++ R
Sbjct: 10 INGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRR 67
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT- 188
++I+ F LL +H +E+A L T +NGK ++ A EV + AG + G +
Sbjct: 68 ARILFNFQQLLSQHKEELAHLITIENGKNTKE-ALGEVGRGIENVEFAAGAPSLMMGDSL 126
Query: 189 APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248
A PIGV G I P+NFP+++ W A+A GNT +LK +E+TPL
Sbjct: 127 ASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEK 186
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
+ +L +AGLP GV N+V G L H E+ ++F GS G+ V + ++ NLK
Sbjct: 187 LVELFEKAGLPKGVFNVVYGAHDVVNGIL-EHPEIKAISFVGSKPVGEYVYKKGSE-NLK 244
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
V G K+ IV DA+++ A F + G+ C A + V E + D+F+ K
Sbjct: 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQ 304
Query: 369 ALAMKRVVGDPFKGGIQQGPQVNQ 392
+G+ G+ GP + +
Sbjct: 305 EKVADIKIGNGLDDGVFLGPVIRE 328
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 159/317 (50%), Gaps = 16/317 (5%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
+NG++ S +P +G + V E+V+ ++A+KA + W ++ ER
Sbjct: 9 VNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSYIER 64
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +++G
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 190 PADGPYHVQT-------LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
G + + EP+G+ I P+N+P+ + K+ PAL GN I K Q
Sbjct: 124 EG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
+S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ + ++A
Sbjct: 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
++P+ LELGGK IV EDAD++ A+ F GQ A R V ESV D+
Sbjct: 243 G---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADE 299
Query: 363 FVEKANALAMKRVVGDP 379
VEK + +G+P
Sbjct: 300 LVEKIREKVLALTIGNP 316
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 156/325 (48%), Gaps = 18/325 (5%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I GQ++ + G+T +LDP V+ +A V+ AV AAR+AF W R +R
Sbjct: 10 IAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRPLEQR 66
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+++ RFA L+ DE+A + + GKP +SA TEV T A + T
Sbjct: 67 IELLERFAATLKSRADELARVIGEETGKPLWESA-TEV---TSXVNKVAISVQAFRERTG 122
Query: 190 PADGPYHVQTL---HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
GP T H+P GV P+NFP + + PAL GN +V K +E TP A
Sbjct: 123 EKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVA 182
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
K +AGLP GVLN+V G G G ALA+H +D L FTGS+ TG ++
Sbjct: 183 ELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQP 241
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVE 365
K + LE GG +P +V E AD+D A + F + GQ C R V + + D +
Sbjct: 242 QKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLA 301
Query: 366 KANALAMKRVVGD------PFKGGI 384
+ A++ VG PF G +
Sbjct: 302 RLVAVSATLRVGRFDEQPAPFXGAV 326
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 157/324 (48%), Gaps = 14/324 (4%)
Query: 71 NGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
NG + SG+ + P + I V + + V R+A+ W + A +R
Sbjct: 27 NGSW--GGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKM--WADIPAPKRG 82
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
+I+ + D L + + +L + + GK + + EV + Y G + I G P
Sbjct: 83 EIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGV-GEVQEYVDVCDYAVGLSRMIGGPVLP 141
Query: 191 ADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
++ P H P+G+ G I +NFP+ ++ W AL CGN + K A TPL+++ V
Sbjct: 142 SERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAV 201
Query: 250 SKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
+K+ L + LP + ++ G G G A+A VD L+FTGST GK+V + +
Sbjct: 202 TKIVAEVLEQNNLPGAICSMTCG-GADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQER 260
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
+ + LELGG + IV EDAD++ A +A GQ C R +HESV+D VE
Sbjct: 261 FGRKL-LELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVE 319
Query: 366 KANALAMKRV-VGDPFKGGIQQGP 388
+ A A K+V +GDP+ GP
Sbjct: 320 RI-AKAYKQVRIGDPWDPSTLYGP 342
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 131/265 (49%), Gaps = 13/265 (4%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+ +RS+++L+ A L+ R E+ A ++ GK + + A +V YYA
Sbjct: 93 WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARA 148
Query: 181 ADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
A + + A PY ++ + P+G I PWNFP+ +F + +A GNT++ K
Sbjct: 149 ALRYR-YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
AE + V ++ HEAG PPGV+N + G G GA L H + + FTGS G
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 298 VLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
+ + A + + K +E GGK+ IV E AD D AAE + + QGQ C A SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 353 TFVHESVYDQFVEKANALAMKRVVG 377
+ + Y+ +E+ A + VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 130/265 (49%), Gaps = 13/265 (4%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+ +RS+++L+ A L+ R E+ A ++ GK + + A +V YYA
Sbjct: 93 WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARA 148
Query: 181 ADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
A + + A PY ++ + P+G I PWNFP+ +F + +A GNT++ K
Sbjct: 149 ALRYR-YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
AE + V ++ HEAG PPGV+N + G G GA L H + + FTGS G
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 298 VLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
+ + A + + K +E GGK IV E AD D AAE + + QGQ C A SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 353 TFVHESVYDQFVEKANALAMKRVVG 377
+ + Y+ +E+ A + VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 142/314 (45%), Gaps = 10/314 (3%)
Query: 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139
G+ T P + I V + D V AR+A+ W + A +R +I+ + D
Sbjct: 36 GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDA 93
Query: 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT 199
L + +L + + GK + EV + Y G + I G P++ H
Sbjct: 94 LREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALI 152
Query: 200 LH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LH 254
P+G+ G I +NFP+ ++ W A+ CGN + K A T L ++ V+K+ L
Sbjct: 153 EQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLE 212
Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 314
+ LP + ++ G G G A+A V+ L+FTGST GK V L + LEL
Sbjct: 213 DNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV-GLMVQERFGRSLLEL 270
Query: 315 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
GG + I EDAD+ A +A GQ C R F+HES++D+ V + +
Sbjct: 271 GGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQI 330
Query: 375 VVGDPFKGGIQQGP 388
VG+P+ + GP
Sbjct: 331 RVGNPWDPNVLYGP 344
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 133/276 (48%), Gaps = 8/276 (2%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R A R+ + + A LLE + AL + GK + A +E+ RYYA
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLD-DALSELREAADFCRYYAAQ 624
Query: 181 ADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
K+ G GP + T+ GV I PWNFPL +F +V AL GN++V K
Sbjct: 625 GRKLFGSETAMPGPTGESNALTMRGR-GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAK 683
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK- 296
AEQTP A LLHEAG+P L +V+G G GAAL +H ++ + FTGST +
Sbjct: 684 PAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIAGVVFTGSTEVARS 742
Query: 297 IVLQLAAKSN-LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 355
I LAAK + P+ E GG + I A ++ A+ + F + GQ C A FV
Sbjct: 743 INRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFV 802
Query: 356 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
E V D+ +E A + +GDP GP ++
Sbjct: 803 QEDVADRMIEMVAGAARELKIGDPSDVATHVGPVID 838
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 162/317 (51%), Gaps = 12/317 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L ING+ V + PT++P + +V+ + + +V A++AA+ AF W
Sbjct: 534 LFINGKEV--RTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDP 589
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R++ +L+ A + E++A + + GK ++Q A +V YYA ++
Sbjct: 590 RTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYAREMIRLGQ 648
Query: 187 LTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
P + +EP GVA I PWNFPL + A+ GN +V K + T +
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK- 304
++ +L EAGLP GV N G G G L H ++ +AFTGS TG +++ AAK
Sbjct: 709 GWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768
Query: 305 ----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+N+K + E+GGK+ I+ +DAD+D+A Y+ F QGQ C A SR V ++VY
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828
Query: 361 DQFVEKANALAMKRVVG 377
D+F+E+ ++A VG
Sbjct: 829 DKFIERLVSMAKATKVG 845
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 7/300 (2%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+ +++P T + ++ ++ A++ A + + W R++I+ A+ L+
Sbjct: 6 YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALKE 63
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE 202
H DE+A T + GK +S + EV + + YYA + T + L +
Sbjct: 64 HEDELAKXXTLEXGKLLSESKE-EVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLKQ 122
Query: 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG- 261
GV PWNFPL P GN I+LK A P SA +K++ AG P G
Sbjct: 123 STGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGS 182
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
++N+ Y A + + + +A TGS G V + A K NLK T ELGG FI
Sbjct: 183 LINLYPSYDQLAD--IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTXELGGNDAFI 239
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V +DAD + + A +N GQ C + R V +S YD+ + + + GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 13/265 (4%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+ +RS+++L+ A L+ R E+ A ++ GK + + A +V YYA
Sbjct: 93 WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARA 148
Query: 181 ADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
A + + A PY ++ + P+G I PWNFP+ +F + +A GNT++ K
Sbjct: 149 ALRYR-YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
AE + V ++ HEAG PPGV+N + G G GA L H + + FTGS G
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 298 VLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
+ + A + + K +E GGK IV E AD D AAE + + QGQ A SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASR 327
Query: 353 TFVHESVYDQFVEKANALAMKRVVG 377
+ + Y+ +E+ A + VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 140/320 (43%), Gaps = 15/320 (4%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP--RMTAYERSKIILRF 136
SG+ P I V E+V R + F G W M ER ++ +
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
AD++ER+ D A + + GKP + +A EV R KI G P D Y
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251
EP+GV I P+N+PL K+ + GN +V+K + PL A K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVT 311
L +AG PP + +++ G A +A V ++FTGST G+ V+++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTGSTEVGERVVKV---GGVKQYV 261
Query: 312 LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
+ELGG P IV EDAD+D AA+ ++ GQ C A VY + VE+
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 372 MKRVVGDPFKGGIQQGPQVN 391
VGDP + GP ++
Sbjct: 322 SSLRVGDPRDPTVDVGPLIS 341
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 140/320 (43%), Gaps = 15/320 (4%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP--RMTAYERSKIILRF 136
SG+ P I V E+V R + F G W M ER ++ +
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
AD++ER+ D A + + GKP + +A EV R KI G P D Y
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251
EP+GV I P+N+PL K+ + GN +V+K + PL A K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVT 311
L +AG PP + +++ G A +A V ++FTGST G+ V+++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTGSTEVGERVVKV---GGVKQYV 261
Query: 312 LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
+ELGG P IV EDAD+D AA+ ++ GQ C A VY + VE+
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 372 MKRVVGDPFKGGIQQGPQVN 391
VGDP + GP ++
Sbjct: 322 SSLRVGDPRDPTVDVGPLIS 341
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 140/320 (43%), Gaps = 15/320 (4%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP--RMTAYERSKIILRF 136
SG+ P I V E+V R + F G W M ER ++ +
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
AD++ER+ D A + + GKP + +A EV R KI G P D Y
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251
EP+GV I P+N+PL K+ + GN +V+K + PL A K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVT 311
L +AG PP + +++ G A +A V ++FTGST G+ V+++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTGSTEVGERVVKV---GGVKQYV 261
Query: 312 LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
+ELGG P IV EDAD+D AA+ ++ GQ C A VY + VE+
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 372 MKRVVGDPFKGGIQQGPQVN 391
VGDP + GP ++
Sbjct: 322 SSLRVGDPRDPTVDVGPLIS 341
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 130/305 (42%), Gaps = 23/305 (7%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG + A+++ A+S A F + W + +R++ + L H
Sbjct: 11 SVNPATGQTLAAXPWANAQEIEHALSLAASGFKK--WKXTSVAQRAQTLRDIGQALRAHA 68
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL---- 200
+E A T + GKP +Q A+ EV + L +YA G P V+
Sbjct: 69 EEXAQCITREXGKPIKQ-ARAEVTKSAALCDWYAE-----HGPAXLNPEPTLVENQQAVI 122
Query: 201 -HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 259
+ P+GV I PWNFPL P L GN+ +LK A A ++++L EAG P
Sbjct: 123 EYRPLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTP 182
Query: 260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI----VLQLAAKSNLKPVTLELG 315
GV YG ++ T TG + + A + LK LELG
Sbjct: 183 AGV------YGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELG 236
Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
G PFIV DAD++ A + A + N GQ C A R V E + F ++ A A
Sbjct: 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALK 296
Query: 376 VGDPF 380
GDP
Sbjct: 297 XGDPL 301
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 7/300 (2%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
I+G+ V SG+ +P TG+V VA D+ AV +A+ A + W
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAA--QPKWAATNPQR 87
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R+++ +F LL + +E+A + ++GK + A+ ++ + + G +
Sbjct: 88 RARVFXKFVQLLNDNXNELAEXLSREHGKTIDD-AKGDIVRGLEVCEFVIGIPHLQKSEF 146
Query: 189 APADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
GP ++ +P+G+ I P+NFP + W PA+ACGN +LK +E+ P +
Sbjct: 147 TEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPI 206
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+++L EAGLP G+LN+V+G A A+ +H ++ ++F GST + V AA N
Sbjct: 207 RLAELXIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-XNG 264
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF-VHESVYDQFVEK 366
K G K+ I+ DAD+D+AA A + + G+ C A S V E ++ ++K
Sbjct: 265 KRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDK 324
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 4/174 (2%)
Query: 193 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL 252
P + EP GV I P+N+P+ + + A+ GNT ++K +E TP ++ + K+
Sbjct: 120 APSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKI 179
Query: 253 LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 312
+ EA P + ++ G G + L S + D + FTGS GK+V+Q AAK +L PV L
Sbjct: 180 IAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVL 235
Query: 313 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
ELGGK P IV DAD+D+ + F N GQ C A +VH SV D +E+
Sbjct: 236 ELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLER 289
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 4/173 (2%)
Query: 194 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253
P + EP GV I P+N+P+ + + A+ GNT ++K +E TP ++ + K++
Sbjct: 121 PSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKII 180
Query: 254 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313
EA P + ++ G G + L S + D + FTGS GK+V+Q AAK +L PV LE
Sbjct: 181 AEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLE 236
Query: 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
LGGK P IV DAD+D+ + F N GQ A +VH SV D +E+
Sbjct: 237 LGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLER 289
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
EP+GV I WN+P + + A+A GN ++LK +E + A ++ L+ + +
Sbjct: 102 EPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQN 160
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
+ +V G P L D + +TGST GKIV+ AAK +L PVTLELGGKSP
Sbjct: 161 LYLVVKGGVPETTELLKERF--DHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCY 217
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V +D D+D A + F N GQ C A S+ +Q VEK ++K G+ K
Sbjct: 218 VDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKK-SLKDFYGEDAK 276
Query: 382 GGIQQGPQVN 391
G +N
Sbjct: 277 QSRDYGRIIN 286
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 10/282 (3%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSA 163
+NRA+ AA A E W +R+++ L+ AD+L E+ A GK Q+
Sbjct: 102 LNRAIDAALAARKE--WDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAE 159
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAW 222
FR+ A +A +++G + P T++ + G I P+NF +
Sbjct: 160 IDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL 219
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
PAL GN ++ K ++ L++ V ++L EAGLPP ++ V GPT G + S
Sbjct: 220 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEH 278
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHY 337
+ + FTGS T K + + A++ + T E GGK+ V ADVD
Sbjct: 279 LCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLR 338
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
+ F GQ C A SR +V +S++ Q + + VGDP
Sbjct: 339 SAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDP 380
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
EP+GV I WN+P + + A+A GN +VLK +E + A ++ ++ + L
Sbjct: 119 EPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKD 177
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
+ +++G P L D + +TGST GKI++ AAK +L PVTLELGGKSP
Sbjct: 178 LYPVINGGVPETTELLKERF--DHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCY 234
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V ++ D+D A + F N GQ C A S+ +Q VEK ++K G+ K
Sbjct: 235 VDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKK-SLKEFYGEDAK 293
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP-- 260
P + G I PWNFPL + PAL G +V+K +E P +V+ LL P
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPR---FVAPLLXALNTVPEL 182
Query: 261 -GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319
VL V G G T GA L ++ VD + FTGS TG+ V + AA+ + P LELGGK P
Sbjct: 183 RDVLIFVEGGGET-GANLINY--VDFVCFTGSVATGREVAETAARRFI-PAYLELGGKDP 238
Query: 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
IV E A+++ A + N GQ C + R +V ES +++F + A A + + P
Sbjct: 239 AIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298
Query: 380 F 380
Sbjct: 299 L 299
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSA 163
+N+A+ AA A E W +R++I L+ AD+L EI A GK Q+
Sbjct: 105 LNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAE 162
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAW 222
FR+ A +A +++G + P T++ + G I P+NF +
Sbjct: 163 IDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNL 222
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
PAL GN ++ K ++ L++ V ++L EAGLPP ++ V GP G + S
Sbjct: 223 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEH 281
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHY 337
+ + FTGS T K + + A++ + T E GGK+ V ADV+
Sbjct: 282 LCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLR 341
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
+ F GQ C A SR +V S++ Q + + VGDP
Sbjct: 342 SAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSA 163
+N+A+ AA A E W +R++I L+ AD+L EI A GK Q+
Sbjct: 105 LNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAE 162
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAW 222
FR+ A +A +++G + P T++ + G I P+NF +
Sbjct: 163 IDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNL 222
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
PAL GN ++ K ++ L++ V ++L EAGLPP ++ V GP G + S
Sbjct: 223 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEH 281
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHY 337
+ + FTGS T K + + A++ + T E GGK+ V ADV+
Sbjct: 282 LCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLR 341
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
+ F GQ C A +R +V S++ Q + + VGDP
Sbjct: 342 SAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSA 163
+N+A+ AA A E W +R++I L+ AD+L EI A GK Q+
Sbjct: 105 LNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAE 162
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAW 222
FR+ A +A +++G + P T++ + G I P+NF +
Sbjct: 163 IDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNL 222
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
PAL GN ++ K ++ L++ V ++L EAGLPP ++ V GP G + S
Sbjct: 223 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEH 281
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHY 337
+ + FTGS T K + + A++ + T E GGK+ V ADV+
Sbjct: 282 LCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLR 341
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
+ F GQ C A R +V S++ Q + + VGDP
Sbjct: 342 SAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 47/357 (13%)
Query: 66 TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
T+LL N GQ++ + +G DP TG + V+ E D+ RA S AR+ D G
Sbjct: 5 TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 60
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
R Y +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 61 RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 119
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
+ + A DG + Q + P GVA I +NFP K PAL G
Sbjct: 120 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSG 179
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
+++K A T L+ V+ ++ LPPG L+I+ G ++ L D ++FTG
Sbjct: 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 236
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
S T + +Q A+ N++ +L + I+C DA D A + LF +
Sbjct: 237 SADTAATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEV 287
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
GQ C A R FV E+ + +E A K VG+P ++ G V++
Sbjct: 288 VREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 47/357 (13%)
Query: 66 TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
T+LL N GQ++ + +G DP TG + V+ E D+ RA S AR+ D G
Sbjct: 5 TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 60
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
R Y +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 61 RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 119
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
+ + A DG + Q + P GVA I +NFP K PAL G
Sbjct: 120 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 179
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
+++K A T L+ V+ ++ LPPG L+I+ G ++ L D ++FTG
Sbjct: 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 236
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
S T + +Q A+ N++ +L + I+C DA D A + LF +
Sbjct: 237 SADTAATLRAHPAFVQRGARLNVQADSL-----NSAILCADATPDTPA----FDLFIKEV 287
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
GQ C A R FV E+ + +E A K VG+P ++ G V++
Sbjct: 288 VREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 47/357 (13%)
Query: 66 TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
T+LL N GQ++ + +G DP TG + V+ E D+ RA S AR+ D G
Sbjct: 5 TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 60
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
R Y +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 61 RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 119
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
+ + A DG + Q + P GVA I +NFP K PAL G
Sbjct: 120 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 179
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
+++K A T L+ V+ ++ LPPG L+I+ G ++ L D ++FTG
Sbjct: 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 236
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
S T + +Q A+ N++ +L + I+C DA D A + LF +
Sbjct: 237 SADTAATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEV 287
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
GQ C A R FV E+ + +E A K VG+P ++ G V++
Sbjct: 288 VREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 47/357 (13%)
Query: 66 TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
T+LL N GQ++ + +G DP TG + V+ E D+ RA S AR+ D G
Sbjct: 3 TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 58
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
R Y +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 59 RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 117
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
+ + A DG + Q + P GVA I +NFP K PAL G
Sbjct: 118 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 177
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
+++K A T L+ V+ ++ LPPG L+I+ G ++ L D ++FTG
Sbjct: 178 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 234
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
S T + +Q A+ N++ +L + I+C DA D A + LF +
Sbjct: 235 SADTAATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEV 285
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
GQ C A R FV E+ + +E A K VG+P ++ G V++
Sbjct: 286 VREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 342
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 152/357 (42%), Gaps = 47/357 (13%)
Query: 66 TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
T+LL N GQ++ + +G DP TG + V+ E D+ RA S AR+ D G
Sbjct: 5 TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 60
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
R Y +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 61 RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 119
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
+ + A DG + Q + P GVA I +NFP K PAL G
Sbjct: 120 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 179
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
+++K A T L+ V+ ++ LPPG L+I+ G ++ L D ++FTG
Sbjct: 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 236
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
S T + +Q A+ N++ +L + I+C DA D A + LF +
Sbjct: 237 SADTAATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEV 287
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
GQ A R FV E+ + +E A K VG+P ++ G V++
Sbjct: 288 VREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 120/298 (40%), Gaps = 26/298 (8%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
L+ G+++D A TF + P G A G E VNRA AA +AF + + E
Sbjct: 33 LVAGEWLDGAG--TFASA-PAHGPA-HDFAVGTVELVNRACEAAEEAF--WTYGYSSRKE 86
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R+ + AD +E + I + + + G P E E TT R +A +K L
Sbjct: 87 RAAFLRAIADEIEARAEAITEIGSQETGLP-EARLNGERGRTTGQLRLFADHIEKGDYLD 145
Query: 189 APADGPY---------HVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGNTIVLK 237
D ++ + P+G NFPL ALA G +V+K
Sbjct: 146 RRVDAAXPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVK 205
Query: 238 TAEQTP----LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
P + A V + + G+ PGV +++ G G AL H + + FTGS
Sbjct: 206 GHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLA 265
Query: 294 TGKIVLQL-AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH---YALFFNQGQCC 347
G+ + L AA+ P ELG +P + +A +A L +L GQ C
Sbjct: 266 GGRALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTXGAGQFC 323
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 113/289 (39%), Gaps = 26/289 (8%)
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTT---RLF----- 174
R+ +R+ ++ A LE +D+I A + P E E+ T RLF
Sbjct: 48 RLNNSKRASLLRTIASELEARSDDIIARAHLETALP-EVRLTGEIARTANQLRLFADVVN 106
Query: 175 --RYYAGWADKIQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPAL 228
Y+ D AP P Q P+ V G NFPL A AL
Sbjct: 107 SGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGA---SNFPLAFSAAGGDTASAL 163
Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVD 284
A G +++K P ++ V++ + +A LP + ++ G G AL SH E+
Sbjct: 164 AAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIK 223
Query: 285 KLAFTGSTTTGKIVLQLA-AKSNLKPVTLELGGKSPFIVCEDADVDKA--AELAHYALFF 341
+ FTGS G+ + LA + P ELG +P + A KA A+ ++
Sbjct: 224 AVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTM 283
Query: 342 NQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQ 389
GQ C F + Q F+E A +L ++ GI+ Q
Sbjct: 284 GCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQ 332
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 9/172 (5%)
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA-- 256
T+ EP+G+ I+P P +K +L N I+ + S +KL+ +A
Sbjct: 99 TIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAV 158
Query: 257 --GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 314
G P ++ + AL H ++ + TG K AA S+ KP
Sbjct: 159 AAGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK-----AAYSSGKPAIGVG 213
Query: 315 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
G P ++ E AD+ +A + F+ G C + V + VYD+ E+
Sbjct: 214 AGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKER 265
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 10/177 (5%)
Query: 192 DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251
D V + P+GV +IP P +K ++ GN+IV + L +
Sbjct: 97 DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVR 156
Query: 252 LLHE----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++ E AG P G ++ ++ L H + + TG + K AA S+
Sbjct: 157 IISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK-----AAYSSG 211
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
P G P + A++ +A + + F+ G CA ++ V E V + V
Sbjct: 212 TPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNG-TICASEQSVVVERVNKEAV 267
>pdb|2ZBK|A Chain A, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|C Chain C, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|E Chain E, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|G Chain G, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
Length = 389
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGA-----ALASHMEVDKLAFTGSTTTGKIVLQLA 302
+V +L E LP +L YG + +++ E ++LA + G + +
Sbjct: 244 FVRRLNEELKLPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMGDIF 303
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
S KP E K+ I +DAD+ +A E+ +Y F
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKDADIKRAEEIKNYEWF 341
>pdb|2X4G|A Chain A, Crystal Structure Of Pa4631, A
Nucleoside-Diphosphate-Sugar Epimerase From Pseudomonas
Aeruginosa
Length = 342
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR--MTAYERSKIILRFADLLERH 143
+ P TG VIT + GE + V+ R D R + A ER +I R+ LL H
Sbjct: 190 IGPTTGRVITAIGNGE---MTHYVAGQRNVIDAAEAGRGLLMALERGRIGERY--LLTGH 244
Query: 144 NDEIAAL 150
N E+A L
Sbjct: 245 NLEMADL 251
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,119,319
Number of Sequences: 62578
Number of extensions: 445561
Number of successful extensions: 1507
Number of sequences better than 100.0: 101
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1217
Number of HSP's gapped (non-prelim): 101
length of query: 392
length of database: 14,973,337
effective HSP length: 101
effective length of query: 291
effective length of database: 8,652,959
effective search space: 2518011069
effective search space used: 2518011069
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)