Query 016240
Match_columns 392
No_of_seqs 232 out of 1833
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 10:16:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 8.1E-78 2.8E-82 610.2 36.1 327 64-392 5-331 (490)
2 3rh9_A Succinate-semialdehyde 100.0 1.3E-73 4.5E-78 581.9 41.2 325 63-391 9-334 (506)
3 3ifg_A Succinate-semialdehyde 100.0 1.1E-73 3.7E-78 580.3 38.0 324 65-392 12-336 (484)
4 3ed6_A Betaine aldehyde dehydr 100.0 1.4E-73 4.6E-78 583.6 37.9 324 64-391 31-357 (520)
5 3b4w_A Aldehyde dehydrogenase; 100.0 2.1E-73 7.2E-78 579.7 38.8 329 62-392 5-333 (495)
6 2o2p_A Formyltetrahydrofolate 100.0 2E-73 6.9E-78 581.9 38.1 326 66-392 37-367 (517)
7 1bxs_A Aldehyde dehydrogenase; 100.0 4.3E-73 1.5E-77 577.9 40.2 326 66-392 21-348 (501)
8 3ek1_A Aldehyde dehydrogenase; 100.0 3.5E-73 1.2E-77 578.5 36.5 324 65-392 32-356 (504)
9 3k2w_A Betaine-aldehyde dehydr 100.0 5.5E-73 1.9E-77 577.2 37.7 328 60-391 7-335 (497)
10 3u4j_A NAD-dependent aldehyde 100.0 1.1E-72 3.9E-77 577.7 39.7 325 64-392 21-349 (528)
11 3i44_A Aldehyde dehydrogenase; 100.0 7.1E-73 2.4E-77 575.7 36.9 329 59-392 19-348 (497)
12 1o04_A Aldehyde dehydrogenase, 100.0 7.3E-73 2.5E-77 576.0 36.0 325 67-392 21-347 (500)
13 1a4s_A ALDH, betaine aldehyde 100.0 1.9E-72 6.6E-77 573.7 38.7 325 63-392 17-342 (503)
14 3r31_A BADH, betaine aldehyde 100.0 8.1E-73 2.8E-77 577.5 35.8 323 62-392 11-337 (517)
15 4f3x_A Putative aldehyde dehyd 100.0 9.8E-73 3.4E-77 574.8 36.3 324 64-392 24-348 (498)
16 3iwj_A Putative aminoaldehyde 100.0 2.9E-72 1E-76 572.7 39.8 328 63-392 5-339 (503)
17 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.2E-72 7.6E-77 574.8 36.6 323 66-392 27-350 (515)
18 3qan_A 1-pyrroline-5-carboxyla 100.0 8.6E-72 2.9E-76 572.4 40.2 323 64-392 36-366 (538)
19 2ve5_A BADH, betaine aldehyde 100.0 5E-72 1.7E-76 570.2 36.7 328 61-391 2-330 (490)
20 4e4g_A Methylmalonate-semialde 100.0 5E-72 1.7E-76 572.1 35.8 327 61-392 22-350 (521)
21 1wnd_A Putative betaine aldehy 100.0 6.8E-72 2.3E-76 568.3 36.0 323 65-392 23-346 (495)
22 2imp_A Lactaldehyde dehydrogen 100.0 7.9E-72 2.7E-76 566.9 36.1 324 65-392 6-331 (479)
23 3jz4_A Succinate-semialdehyde 100.0 8.9E-72 3.1E-76 566.8 36.4 324 65-392 9-333 (481)
24 3prl_A NADP-dependent glyceral 100.0 1.4E-71 4.9E-76 567.1 35.7 322 64-392 10-337 (505)
25 2w8n_A Succinate-semialdehyde 100.0 3.4E-71 1.2E-75 562.8 35.0 321 66-392 13-338 (487)
26 4dng_A Uncharacterized aldehyd 100.0 6.3E-71 2.1E-75 561.4 35.5 324 64-391 5-331 (485)
27 3ty7_A Putative aldehyde dehyd 100.0 5.2E-71 1.8E-75 561.0 33.0 322 64-392 6-327 (478)
28 3r64_A NAD dependent benzaldeh 100.0 1.5E-70 5.2E-75 560.7 36.2 328 61-392 8-339 (508)
29 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.2E-70 4.2E-75 562.3 35.6 321 66-392 38-366 (516)
30 3pqa_A Lactaldehyde dehydrogen 100.0 1.3E-70 4.3E-75 557.8 34.9 314 68-391 2-319 (486)
31 1t90_A MMSDH, probable methylm 100.0 1.7E-70 5.8E-75 557.8 35.9 322 65-392 5-328 (486)
32 1euh_A NADP dependent non phos 100.0 1.3E-70 4.6E-75 557.3 34.3 320 64-392 3-328 (475)
33 2j6l_A Aldehyde dehydrogenase 100.0 3.7E-70 1.3E-74 556.8 37.4 322 64-392 22-348 (500)
34 1uxt_A Glyceraldehyde-3-phosph 100.0 2.2E-70 7.7E-75 558.2 33.4 322 63-392 16-342 (501)
35 3ju8_A Succinylglutamic semial 100.0 3.2E-69 1.1E-73 548.9 37.2 319 67-391 7-328 (490)
36 3ros_A NAD-dependent aldehyde 100.0 1.7E-69 5.9E-74 549.2 34.5 306 82-392 5-310 (484)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 2.1E-68 7E-73 548.8 35.5 324 63-392 61-394 (563)
38 4f9i_A Proline dehydrogenase/d 100.0 1.2E-67 4E-72 571.3 35.5 324 64-392 530-860 (1026)
39 3etf_A Putative succinate-semi 100.0 4.4E-67 1.5E-71 530.3 35.5 308 79-391 5-312 (462)
40 2y53_A Aldehyde dehydrogenase 100.0 4E-67 1.4E-71 538.8 30.4 319 65-392 7-344 (534)
41 4h7n_A Aldehyde dehydrogenase; 100.0 1E-65 3.5E-70 521.4 31.2 306 78-391 3-310 (474)
42 3v4c_A Aldehyde dehydrogenase 100.0 2.7E-64 9.3E-69 517.0 30.9 315 62-391 26-362 (528)
43 3lns_A Benzaldehyde dehydrogen 100.0 2.3E-63 8E-68 502.0 35.3 302 80-392 5-310 (457)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 1.6E-62 5.4E-67 502.0 30.2 297 77-377 3-320 (510)
45 3haz_A Proline dehydrogenase; 100.0 4.3E-61 1.5E-65 519.0 33.8 292 97-392 544-839 (1001)
46 3sza_A Aldehyde dehydrogenase, 100.0 1E-60 3.4E-65 483.4 32.8 287 99-392 14-304 (469)
47 3k9d_A LMO1179 protein, aldehy 100.0 6.8E-57 2.3E-61 455.6 20.4 287 96-392 5-304 (464)
48 2h5g_A Delta 1-pyrroline-5-car 100.0 2.8E-56 9.6E-61 450.0 17.6 277 84-371 10-305 (463)
49 3my7_A Alcohol dehydrogenase/a 100.0 1.3E-54 4.4E-59 437.6 25.8 264 97-370 1-269 (452)
50 4ghk_A Gamma-glutamyl phosphat 100.0 5.5E-54 1.9E-58 431.8 23.4 269 102-380 25-315 (444)
51 1vlu_A Gamma-glutamyl phosphat 100.0 3.6E-54 1.2E-58 435.1 17.6 266 104-380 15-305 (468)
52 1o20_A Gamma-glutamyl phosphat 100.0 2.8E-53 9.7E-58 424.7 22.1 265 102-376 13-296 (427)
53 4gic_A HDH, histidinol dehydro 84.1 32 0.0011 33.3 24.3 165 193-373 119-293 (423)
54 3v4g_A Arginine repressor; vib 77.2 4.2 0.00014 34.7 5.9 122 124-269 29-152 (180)
55 3lap_A Arginine repressor; arg 59.7 31 0.0011 29.0 7.6 37 229-269 110-146 (170)
56 2yvq_A Carbamoyl-phosphate syn 58.9 14 0.00049 30.0 5.3 63 250-314 60-132 (143)
57 2xw6_A MGS, methylglyoxal synt 58.2 3.9 0.00013 33.2 1.6 82 221-313 21-111 (134)
58 1b4a_A Arginine repressor; hel 57.4 78 0.0027 25.8 10.9 36 230-269 90-125 (149)
59 3v42_A Folliculin; tumor suppr 57.3 13 0.00043 33.0 4.9 69 221-297 21-89 (226)
60 1b93_A Protein (methylglyoxal 56.1 22 0.00076 29.3 6.0 114 205-344 12-135 (152)
61 3fxd_A Protein ICMQ; helix bun 56.0 33 0.0011 23.1 5.5 47 100-152 5-51 (57)
62 1b4b_A Arginine repressor; cor 52.3 30 0.001 24.4 5.4 56 230-302 12-67 (71)
63 2zfz_A Arginine repressor; DNA 51.5 33 0.0011 24.8 5.6 36 230-269 20-55 (79)
64 2ioj_A Hypothetical protein AF 49.9 17 0.00058 29.1 4.3 50 261-311 53-102 (139)
65 1kae_A HDH, histidinol dehydro 46.8 2.1E+02 0.0071 27.7 20.4 163 194-372 114-286 (434)
66 1xxa_A ARGR, arginine represso 46.2 26 0.0009 25.3 4.4 37 230-269 14-50 (78)
67 2p5m_A Arginine repressor; alp 45.8 31 0.0011 25.2 4.8 36 230-269 24-59 (83)
68 1vmd_A MGS, methylglyoxal synt 38.8 27 0.00093 29.6 3.9 122 197-344 19-151 (178)
69 3pzy_A MOG; ssgcid, seattle st 35.2 25 0.00086 29.2 3.1 50 245-295 28-79 (164)
70 3iwt_A 178AA long hypothetical 33.0 64 0.0022 26.8 5.4 52 244-295 40-94 (178)
71 3rfq_A Pterin-4-alpha-carbinol 31.0 27 0.00091 29.8 2.6 54 243-296 48-103 (185)
72 1y5e_A Molybdenum cofactor bio 30.1 34 0.0012 28.4 3.2 52 244-295 31-85 (169)
73 4g6u_B EC869 CDII; beta-augmen 27.4 83 0.0028 26.5 5.0 83 66-156 11-96 (177)
74 2pjk_A 178AA long hypothetical 23.3 41 0.0014 28.3 2.4 53 243-295 39-94 (178)
75 3fgh_A Transcription factor A, 22.3 70 0.0024 21.7 3.1 35 112-148 30-64 (67)
76 3mwd_B ATP-citrate synthase; A 21.8 4.8E+02 0.016 24.1 12.2 128 228-374 166-318 (334)
77 2bon_A Lipid kinase; DAG kinas 20.9 1.9E+02 0.0066 26.4 6.9 104 233-340 33-146 (332)
78 1wu2_A MOEA protein, molybdopt 20.4 22 0.00075 34.2 0.1 52 245-296 212-264 (396)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=8.1e-78 Score=610.25 Aligned_cols=327 Identities=41% Similarity=0.714 Sum_probs=313.9
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 143 (392)
...++||||+|+++.+|++++++||.||++|++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|+++
T Consensus 5 ~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 82 (490)
T 2wme_A 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRER 82 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 345899999999988899999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (392)
Q Consensus 144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (392)
.++|++++++|+|||+.+++..|+..+++.++||+.+.+++.+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999987667999999999999999998887777666778899999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.++
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999988665
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~ 383 (392)
.+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~ 322 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence 55899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCC
Q 016240 384 IQQGPQVNQ 392 (392)
Q Consensus 384 ~~~Gpli~~ 392 (392)
+++||||++
T Consensus 323 ~~~Gpli~~ 331 (490)
T 2wme_A 323 TNFGPLVSF 331 (490)
T ss_dssp CCBCCCSCH
T ss_pred CccCCcCCH
Confidence 999999973
No 2
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.3e-73 Score=581.87 Aligned_cols=325 Identities=36% Similarity=0.566 Sum_probs=312.4
Q ss_pred CCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (392)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~ 142 (392)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999877889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEe-cccceEEEEcCCcccHHHHH
Q 016240 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFA 221 (392)
Q Consensus 143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 221 (392)
+.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+...+...++.+ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999987 6999999999999999999877766554566778889 99999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (392)
Q Consensus 222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~ 301 (392)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|+.||+||+|+||||+++|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC
Q 016240 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (392)
Q Consensus 302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~ 381 (392)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCC
Q 016240 382 GGIQQGPQVN 391 (392)
Q Consensus 382 ~~~~~Gpli~ 391 (392)
+++++||||+
T Consensus 325 ~~~~~Gpli~ 334 (506)
T 3rh9_A 325 DGIDIGPLIN 334 (506)
T ss_dssp TTCSBCCCSC
T ss_pred cCCcccccCC
Confidence 9999999997
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.1e-73 Score=580.35 Aligned_cols=324 Identities=40% Similarity=0.642 Sum_probs=309.9
Q ss_pred ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (392)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (392)
..++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45799999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (392)
Q Consensus 145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (392)
++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 9999999999999999976 5999999999999999888776655533 4567889999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.++++.|..||+||+|.||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987889999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~ 383 (392)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCC
Q 016240 384 IQQGPQVNQ 392 (392)
Q Consensus 384 ~~~Gpli~~ 392 (392)
+++||||++
T Consensus 328 ~~~Gpli~~ 336 (484)
T 3ifg_A 328 ATLGPLINE 336 (484)
T ss_dssp CCBCCCSSH
T ss_pred CCCCCCcCH
Confidence 999999973
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.4e-73 Score=583.59 Aligned_cols=324 Identities=38% Similarity=0.654 Sum_probs=310.5
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLE 141 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~--~~g~W~~~~~~~R~~~L~~~a~~l~ 141 (392)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++|| + .|+.++..+|.++|+++++.|+
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 108 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIK 108 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHH
T ss_pred cCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 35579999999987788999999999999999999999999999999999999 7 9999999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHH
Q 016240 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (392)
Q Consensus 142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (392)
++.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 109 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 187 (520)
T 3ed6_A 109 EHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQA 187 (520)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHH
Confidence 9999999999999999999987 5999999999999999988777655543 4567889999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (392)
Q Consensus 221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~ 300 (392)
+++++|||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.|++
T Consensus 188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~ 267 (520)
T 3ed6_A 188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK 267 (520)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987889999999999999999999999999999
Q ss_pred HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (392)
Q Consensus 301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~ 380 (392)
.+++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 268 ~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~ 346 (520)
T 3ed6_A 268 NAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGF 346 (520)
T ss_dssp HHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTT
T ss_pred Hhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence 9997 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCC
Q 016240 381 KGGIQQGPQVN 391 (392)
Q Consensus 381 ~~~~~~Gpli~ 391 (392)
|+++++||||+
T Consensus 347 d~~~~~Gpli~ 357 (520)
T 3ed6_A 347 DADTEMGPVIS 357 (520)
T ss_dssp STTCSBCCCSC
T ss_pred cCCCcccccCC
Confidence 99999999997
No 5
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-73 Score=579.72 Aligned_cols=329 Identities=35% Similarity=0.571 Sum_probs=310.7
Q ss_pred CCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (392)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~ 141 (392)
++.+.++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+.|.|+.++.++|.++|+++++.|+
T Consensus 5 ~~~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~ 84 (495)
T 3b4w_A 5 ATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLA 84 (495)
T ss_dssp CEECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHH
Confidence 33455789999999876788999999999999999999999999999999999998667999999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (392)
Q Consensus 142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (392)
++.++|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||++|+|||||+...+
T Consensus 85 ~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 164 (495)
T 3b4w_A 85 ERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAV 164 (495)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHH
Confidence 99999999999999999999864699999999999999988877765443334467899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (392)
Q Consensus 222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~ 301 (392)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+||+|.||||+.+|+.|++.
T Consensus 165 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~ 243 (495)
T 3b4w_A 165 NKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRR 243 (495)
T ss_dssp HHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 88899999999999999999999999999999
Q ss_pred hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC
Q 016240 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (392)
Q Consensus 302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~ 381 (392)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 244 aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 322 (495)
T 3b4w_A 244 AAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSD 322 (495)
T ss_dssp HHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTC
T ss_pred hhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCcc
Confidence 997 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCC
Q 016240 382 GGIQQGPQVNQ 392 (392)
Q Consensus 382 ~~~~~Gpli~~ 392 (392)
+++++||||++
T Consensus 323 ~~~~~gpli~~ 333 (495)
T 3b4w_A 323 PAAQIGPLISE 333 (495)
T ss_dssp TTCCBCCCSCH
T ss_pred CCCccCCCcCH
Confidence 99999999973
No 6
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=2e-73 Score=581.94 Aligned_cols=326 Identities=43% Similarity=0.803 Sum_probs=308.3
Q ss_pred cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (392)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (392)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|.|+.++..+|.++|++++++|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 36899999997666789999999999999999999999999999999999986579999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC----CCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (392)
Q Consensus 146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (392)
+|++++++|+|||+.++...|+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 9999999999999999864699999999999999998877665443 223357899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (392)
Q Consensus 222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~ 301 (392)
+++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.+.++.|..||+||+|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999999
Q ss_pred hh-hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240 302 AA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (392)
Q Consensus 302 aa-~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~ 380 (392)
++ + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 98 6 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCC
Q 016240 381 KGGIQQGPQVNQ 392 (392)
Q Consensus 381 ~~~~~~Gpli~~ 392 (392)
|+++++||||++
T Consensus 356 ~~~~~~Gpli~~ 367 (517)
T 2o2p_A 356 ERDTNHGPQNHE 367 (517)
T ss_dssp STTCCBCCCSSH
T ss_pred CCCCccCCCcCH
Confidence 999999999973
No 7
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=4.3e-73 Score=577.87 Aligned_cols=326 Identities=55% Similarity=0.960 Sum_probs=309.4
Q ss_pred cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHN 144 (392)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g-~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (392)
.++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++.
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987678899999999999999999999999999999999999743 5999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (392)
Q Consensus 145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 224 (392)
++|++++++|+|||+.++...|+..+++.++|++.+.+++.+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999998766799999999999999998887765554445567899999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh-
Q 016240 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA- 303 (392)
Q Consensus 225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa- 303 (392)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+.++.|..||+||+|+||||+.+|+.|++.++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999977788999999999999999999999999999999
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~ 383 (392)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCC
Q 016240 384 IQQGPQVNQ 392 (392)
Q Consensus 384 ~~~Gpli~~ 392 (392)
+++||||++
T Consensus 340 ~~~Gpli~~ 348 (501)
T 1bxs_A 340 VSQGPQIDK 348 (501)
T ss_dssp CCBCCCSCH
T ss_pred CccCCCcCH
Confidence 999999973
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=3.5e-73 Score=578.52 Aligned_cols=324 Identities=37% Similarity=0.645 Sum_probs=309.5
Q ss_pred ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (392)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (392)
..++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (392)
Q Consensus 145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (392)
++|++++++|+|||+.++.. |+..+++.++||+.+.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999764 999999999999999988776655433 3567889999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+.++.|..||+||+|.||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~ 383 (392)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCC
Q 016240 384 IQQGPQVNQ 392 (392)
Q Consensus 384 ~~~Gpli~~ 392 (392)
+++||+|++
T Consensus 348 ~~~Gpli~~ 356 (504)
T 3ek1_A 348 VVIGPMIEE 356 (504)
T ss_dssp CCBCCCSSH
T ss_pred CccccccCH
Confidence 999999973
No 9
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=5.5e-73 Score=577.24 Aligned_cols=328 Identities=36% Similarity=0.590 Sum_probs=312.8
Q ss_pred CCCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 016240 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139 (392)
Q Consensus 60 ~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~ 139 (392)
+.+.+..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.
T Consensus 7 ~~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 84 (497)
T 3k2w_A 7 DLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANK 84 (497)
T ss_dssp CCCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred cccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 3456677899999999877789999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHH
Q 016240 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (392)
Q Consensus 140 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (392)
|+++.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+. ..+...++.++|+|||++|+|||||+.
T Consensus 85 l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 163 (497)
T 3k2w_A 85 IRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLA 163 (497)
T ss_dssp HHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHH
Confidence 999999999999999999999987 599999999999999988877665443 245678899999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHH
Q 016240 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (392)
Q Consensus 219 ~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i 298 (392)
..++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.|
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i 243 (497)
T 3k2w_A 164 LAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQI 243 (497)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887899999999999999999999999999
Q ss_pred HHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCC
Q 016240 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (392)
Q Consensus 299 ~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~ 378 (392)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 244 ~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~ 322 (497)
T 3k2w_A 244 YKTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGD 322 (497)
T ss_dssp HHHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCC
Q 016240 379 PFKGGIQQGPQVN 391 (392)
Q Consensus 379 p~~~~~~~Gpli~ 391 (392)
|+|+++++||+|+
T Consensus 323 p~~~~~~~gpli~ 335 (497)
T 3k2w_A 323 PMDADSQMGPKCN 335 (497)
T ss_dssp TTSTTCSBCCCSC
T ss_pred CCCCCCccccCcC
Confidence 9999999999997
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-72 Score=577.72 Aligned_cols=325 Identities=41% Similarity=0.693 Sum_probs=311.3
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHH
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLL 140 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~--~~g~W~~~~~~~R~~~L~~~a~~l 140 (392)
...++||||+|+.+.++++++++||.| |+++++++.++.+|+++++++|++|| . .|+.++.++|.++|+++++.|
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l 98 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLI 98 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHH
Confidence 356899999999877889999999999 99999999999999999999999999 7 899999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHH
Q 016240 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (392)
Q Consensus 141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (392)
+++.++|++++++|+|||+.++ ..|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+..
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 177 (528)
T 3u4j_A 99 LARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFII 177 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHH
Confidence 9999999999999999999998 57999999999999999988877666544 466789999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (392)
Q Consensus 220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~ 299 (392)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 257 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLG 257 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (392)
Q Consensus 300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p 379 (392)
+.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 258 ~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 258 EIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCC
Q 016240 380 FKGGIQQGPQVNQ 392 (392)
Q Consensus 380 ~~~~~~~Gpli~~ 392 (392)
+|+++++||+|++
T Consensus 337 ~~~~~~~Gpli~~ 349 (528)
T 3u4j_A 337 LNERTKIGAMISE 349 (528)
T ss_dssp TSTTCSBCCCSCH
T ss_pred CCcCCccCCccCH
Confidence 9999999999973
No 11
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=7.1e-73 Score=575.72 Aligned_cols=329 Identities=32% Similarity=0.538 Sum_probs=306.6
Q ss_pred CCCCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 016240 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD 138 (392)
Q Consensus 59 ~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~ 138 (392)
+..+....++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++
T Consensus 19 ~~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~ 96 (497)
T 3i44_A 19 PGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILE 96 (497)
T ss_dssp ---CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHH
T ss_pred CcccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHH
Confidence 44444567899999999887888999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEE-ecccceEEEEcCCcccH
Q 016240 139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPL 217 (392)
Q Consensus 139 ~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~ 217 (392)
.|+++.++|++++++|+|||+.++...|+..+++.+++++...........+. .+...++. ++|+|||++|+|||||+
T Consensus 97 ~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~ 175 (497)
T 3i44_A 97 IYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPM 175 (497)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchH
Confidence 99999999999999999999999875699999999999998776644322221 13445677 99999999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (392)
Q Consensus 218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~ 297 (392)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.
T Consensus 176 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~ 255 (497)
T 3i44_A 176 NQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255 (497)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (392)
Q Consensus 298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG 377 (392)
|++.+++ ++||+++|+|||||+||++||| |.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 256 i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG 333 (497)
T 3i44_A 256 ISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVG 333 (497)
T ss_dssp HHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 9999997 8999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCC
Q 016240 378 DPFKGGIQQGPQVNQ 392 (392)
Q Consensus 378 ~p~~~~~~~Gpli~~ 392 (392)
||+|+++++||||++
T Consensus 334 ~p~~~~~~~Gpli~~ 348 (497)
T 3i44_A 334 PGHQTGNHIGPVVSK 348 (497)
T ss_dssp CTTSCSSCBCCCSCH
T ss_pred CCCCCCCccCCCcCH
Confidence 999999999999973
No 12
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=7.3e-73 Score=576.03 Aligned_cols=325 Identities=61% Similarity=1.026 Sum_probs=308.1
Q ss_pred CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (392)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g-~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (392)
++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++.++|.++|+++++.|+++.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987678899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (392)
Q Consensus 146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~ 225 (392)
+|++++++|+|||+.++...|+..+++.++|++++.+++.+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987667999999999999999888776654444455678999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh-h
Q 016240 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-K 304 (392)
Q Consensus 226 ~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa-~ 304 (392)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|.||||+.+|+.|++.++ +
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999977788999999999999999999999999999999 6
Q ss_pred CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (392)
Q Consensus 305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~ 384 (392)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCC
Q 016240 385 QQGPQVNQ 392 (392)
Q Consensus 385 ~~Gpli~~ 392 (392)
++||||++
T Consensus 340 ~~Gpli~~ 347 (500)
T 1o04_A 340 EQGPQVDE 347 (500)
T ss_dssp SBCCCSSH
T ss_pred ccCcccCH
Confidence 99999973
No 13
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.9e-72 Score=573.67 Aligned_cols=325 Identities=37% Similarity=0.663 Sum_probs=307.8
Q ss_pred CCccCceeCCEeeeCCCCCe-eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240 63 VDYTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (392)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~-~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~ 141 (392)
+...++||||+|+...++++ ++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 94 (503)
T 1a4s_A 17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIR 94 (503)
T ss_dssp CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHH
Confidence 34457899999998766788 99999999999999999999999999999999999 9999999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (392)
Q Consensus 142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (392)
++.++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+...+...++.++|+|||++|+|||||+...+
T Consensus 95 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 173 (503)
T 1a4s_A 95 ERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAA 173 (503)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHH
Confidence 9999999999999999999875 599999999999999998876654443334567899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (392)
Q Consensus 222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~ 301 (392)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.++.|..||+||+|+||||+.+|+.|++.
T Consensus 174 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 252 (503)
T 1a4s_A 174 WKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252 (503)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999977 889999999999999999999999999999
Q ss_pred hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC
Q 016240 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (392)
Q Consensus 302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~ 381 (392)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 253 aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 331 (503)
T 1a4s_A 253 SAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 997 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCC
Q 016240 382 GGIQQGPQVNQ 392 (392)
Q Consensus 382 ~~~~~Gpli~~ 392 (392)
+++++||||++
T Consensus 332 ~~~~~gpli~~ 342 (503)
T 1a4s_A 332 TETRMGGLISK 342 (503)
T ss_dssp TTCCBCCCSCH
T ss_pred cCCccCCCcCH
Confidence 99999999973
No 14
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=8.1e-73 Score=577.47 Aligned_cols=323 Identities=35% Similarity=0.633 Sum_probs=308.9
Q ss_pred CCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (392)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~ 141 (392)
+....++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 88 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR 88 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 44567899999999887889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHh----hcCccCCCCCCCeeEEEecccceEEEEcCCcccH
Q 016240 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217 (392)
Q Consensus 142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 217 (392)
++.++|++++++|+|||+.++ |+..+++.++|++.+.++ +.+...+...+. .++.++|+|||++|+|||||+
T Consensus 89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~ 164 (517)
T 3r31_A 89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ 164 (517)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence 999999999999999999886 999999999999999988 666655544455 899999999999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (392)
Q Consensus 218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~ 297 (392)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+.+|+.
T Consensus 165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 243 (517)
T 3r31_A 165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK 243 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 7788999999999999999999999999
Q ss_pred HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (392)
Q Consensus 298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG 377 (392)
|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 244 i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 244 VAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCC
Q 016240 378 DPFKGGIQQGPQVNQ 392 (392)
Q Consensus 378 ~p~~~~~~~Gpli~~ 392 (392)
||+|+++++||||++
T Consensus 323 ~p~~~~~~~Gpli~~ 337 (517)
T 3r31_A 323 DPLDYATHLGPLVSK 337 (517)
T ss_dssp CTTSTTCSBCCBSCH
T ss_pred CCCCcCCcccCCcCH
Confidence 999999999999973
No 15
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=9.8e-73 Score=574.82 Aligned_cols=324 Identities=37% Similarity=0.611 Sum_probs=308.3
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 143 (392)
...++||||+|+...++ +++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 100 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKE 100 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 45689999999987666 999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (392)
Q Consensus 144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (392)
.++|++++++|+|||+.++...|+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 101 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (498)
T 4f3x_A 101 ADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW 180 (498)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHH
Confidence 999999999999999999845799999999999999988876665442 2456788999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (392)
Q Consensus 223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a 302 (392)
++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 259 (498)
T 4f3x_A 181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAA 259 (498)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999998888999999999999999999999999999999
Q ss_pred hhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCC
Q 016240 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (392)
Q Consensus 303 a~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~ 382 (392)
++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|+
T Consensus 260 a~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 260 AK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred Hh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 97 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCC
Q 016240 383 GIQQGPQVNQ 392 (392)
Q Consensus 383 ~~~~Gpli~~ 392 (392)
++++||||++
T Consensus 339 ~~~~Gpli~~ 348 (498)
T 4f3x_A 339 ENEIGPLISR 348 (498)
T ss_dssp GCSSCCCSCH
T ss_pred cCccccCcCH
Confidence 9999999973
No 16
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2.9e-72 Score=572.68 Aligned_cols=328 Identities=40% Similarity=0.715 Sum_probs=309.4
Q ss_pred CCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 016240 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADL 139 (392)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g---~W~~~~~~~R~~~L~~~a~~ 139 (392)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344579999999988788999999999999999999999999999999999999743 79999999999999999999
Q ss_pred HHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccC---C-CCCCCeeEEEecccceEEEEcCCcc
Q 016240 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---P-ADGPYHVQTLHEPIGVAGQIIPWNF 215 (392)
Q Consensus 140 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~i~p~n~ 215 (392)
|+++.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+... + ...+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 999999999999999999999976 5999999999999999888765431 1 1235678899999999999999999
Q ss_pred cHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHH
Q 016240 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (392)
Q Consensus 216 P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g 295 (392)
|+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|.||||+++|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999877889999999999999999999999
Q ss_pred HHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (392)
Q Consensus 296 ~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~ 375 (392)
+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999987 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCC
Q 016240 376 VGDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 376 vG~p~~~~~~~Gpli~~ 392 (392)
+|||+|+++++||||++
T Consensus 323 ~g~p~~~~~~~gpli~~ 339 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSE 339 (503)
T ss_dssp BSCTTSTTCCBCCCSCH
T ss_pred CCCCCCCCCcccCccCH
Confidence 99999999999999973
No 17
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.2e-72 Score=574.77 Aligned_cols=323 Identities=41% Similarity=0.700 Sum_probs=308.2
Q ss_pred cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (392)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (392)
.++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999876788999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (392)
Q Consensus 146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 224 (392)
+|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999987 799999999999999988877765543 335567889999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (392)
Q Consensus 225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~ 304 (392)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999997
Q ss_pred CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (392)
Q Consensus 305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~ 384 (392)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCC
Q 016240 385 QQGPQVNQ 392 (392)
Q Consensus 385 ~~Gpli~~ 392 (392)
++||||++
T Consensus 343 ~~gpli~~ 350 (515)
T 2d4e_A 343 EVGPLIHP 350 (515)
T ss_dssp SBCCCSCH
T ss_pred ccCCCcCH
Confidence 99999973
No 18
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=8.6e-72 Score=572.43 Aligned_cols=323 Identities=32% Similarity=0.532 Sum_probs=308.5
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~ 142 (392)
+..++||||+|+. ++++++++||.| |+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 111 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRR 111 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHH
Confidence 3568999999996 788999999999 999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHH-HHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (392)
Q Consensus 143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (392)
+.++|++++++|+|||+.++.. |+..+++.++|++.+ .+...+...+...+...++.++|+|||++|+|||||+...+
T Consensus 112 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 112 RKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 9999999999999999999875 999999999999998 56666766665456778999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (392)
Q Consensus 222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~ 301 (392)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 270 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhhCC------CccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240 302 AAKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (392)
Q Consensus 302 aa~~~------~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~ 375 (392)
+++ + +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 271 aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 271 AAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp HTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred hhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 987 6 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCC
Q 016240 376 VGDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 376 vG~p~~~~~~~Gpli~~ 392 (392)
+|||+|+++++||+|++
T Consensus 350 vG~p~~~~~~~Gpli~~ 366 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDE 366 (538)
T ss_dssp BSCTTSTTCSBCCCSCH
T ss_pred CCCCCCCCCCCcCccCH
Confidence 99999999999999973
No 19
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=5e-72 Score=570.15 Aligned_cols=328 Identities=41% Similarity=0.715 Sum_probs=313.2
Q ss_pred CCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (392)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l 140 (392)
++++..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|
T Consensus 2 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 79 (490)
T 2ve5_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDIL 79 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 455667899999999877889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHH
Q 016240 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (392)
Q Consensus 141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (392)
+++.++|++++++|+|||..++...|+..+++.++|++++.+++.+...+...+...++.++|+|||++|+|||||+...
T Consensus 80 ~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~ 159 (490)
T 2ve5_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHH
Confidence 99999999999999999999987569999999999999998887666555445677889999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (392)
Q Consensus 221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~ 300 (392)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+++|+.|++
T Consensus 160 ~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~ 239 (490)
T 2ve5_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987889999999999999999999999999999
Q ss_pred Hh-hhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240 301 LA-AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (392)
Q Consensus 301 ~a-a~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p 379 (392)
.+ +. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 240 ~a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 318 (490)
T 2ve5_A 240 SASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred hchhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99 76 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCC
Q 016240 380 FKGGIQQGPQVN 391 (392)
Q Consensus 380 ~~~~~~~Gpli~ 391 (392)
+|+++++||+++
T Consensus 319 ~d~~~~~gpli~ 330 (490)
T 2ve5_A 319 QDENTNFGPLVS 330 (490)
T ss_dssp TSTTCCBCCCSC
T ss_pred CCCCCccCCCCC
Confidence 999999999997
No 20
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=5e-72 Score=572.14 Aligned_cols=327 Identities=26% Similarity=0.435 Sum_probs=307.6
Q ss_pred CCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (392)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l 140 (392)
.++...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|
T Consensus 22 s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 99 (521)
T 4e4g_A 22 SMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLL 99 (521)
T ss_dssp --CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred hhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 335667899999999877789999999999999999999999999999999999999 999999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHH
Q 016240 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (392)
Q Consensus 141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (392)
+++.++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.+...+. ..+...++.++|+|||++|+|||||+..
T Consensus 100 ~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 178 (521)
T 4e4g_A 100 NDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMI 178 (521)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHH
Confidence 99999999999999999999976 599999999999999887776654332 2355678999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (392)
Q Consensus 220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~ 299 (392)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .+.++.|+.||+||+|+||||+.+|+.|+
T Consensus 179 ~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~ 257 (521)
T 4e4g_A 179 PMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVY 257 (521)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999994 55679999999999999999999999999
Q ss_pred HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCc-chHHHHHHHHHHHhcCccCC
Q 016240 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGD 378 (392)
Q Consensus 300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~vG~ 378 (392)
+.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++||
T Consensus 258 ~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~ 336 (521)
T 4e4g_A 258 GTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP 336 (521)
T ss_dssp HHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCC
T ss_pred HHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence 99997 89999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCccccCCCC
Q 016240 379 PFKGGIQQGPQVNQ 392 (392)
Q Consensus 379 p~~~~~~~Gpli~~ 392 (392)
|+|+++++||+|++
T Consensus 337 ~~~~~~~~gpli~~ 350 (521)
T 4e4g_A 337 YTDEKADMGPVVTK 350 (521)
T ss_dssp TTCTTCSBCCCSCH
T ss_pred CCCccCccCCCCCH
Confidence 99999999999973
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=6.8e-72 Score=568.26 Aligned_cols=323 Identities=38% Similarity=0.656 Sum_probs=305.4
Q ss_pred ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (392)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (392)
..++||||+|+...+ ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997655 8899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (392)
Q Consensus 145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (392)
++|++++++|+|||+.++...|+..+++.++|++++++++.++..+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999987644999999999999999888766554432 2446788999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
+++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999977788999999999999999999999999999999
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~ 383 (392)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 259 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred h-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCC
Q 016240 384 IQQGPQVNQ 392 (392)
Q Consensus 384 ~~~Gpli~~ 392 (392)
+++||||++
T Consensus 338 ~~~Gpli~~ 346 (495)
T 1wnd_A 338 TELGPLSSL 346 (495)
T ss_dssp CCBCCCSCH
T ss_pred CCccCCCCH
Confidence 999999973
No 22
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=7.9e-72 Score=566.93 Aligned_cols=324 Identities=35% Similarity=0.600 Sum_probs=307.3
Q ss_pred ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (392)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (392)
+.++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999866778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (392)
Q Consensus 145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (392)
++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+.. .+...+..++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999976 6999999999999998887766654432 3456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
+++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.++++.|..||+||+|.||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999999
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC-C
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-G 382 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~-~ 382 (392)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccccCCCC
Q 016240 383 GIQQGPQVNQ 392 (392)
Q Consensus 383 ~~~~Gpli~~ 392 (392)
++++||||++
T Consensus 322 ~~~~gpli~~ 331 (479)
T 2imp_A 322 DIAMGPLINA 331 (479)
T ss_dssp SCSBCCCSSH
T ss_pred CCccCCCcCH
Confidence 9999999973
No 23
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=8.9e-72 Score=566.80 Aligned_cols=324 Identities=39% Similarity=0.682 Sum_probs=309.0
Q ss_pred ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (392)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (392)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (392)
Q Consensus 145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (392)
++|++++++|+|||..++. .|+..+++.++|++.+..+..+...+.. .+...++.++|+|||++|+|||||++..+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 9999999999999999976 5999999999999998887766554432 4567789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|.||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~ 383 (392)
+ +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCC
Q 016240 384 IQQGPQVNQ 392 (392)
Q Consensus 384 ~~~Gpli~~ 392 (392)
+++||++++
T Consensus 325 ~~~gpli~~ 333 (481)
T 3jz4_A 325 VTIGPLIDE 333 (481)
T ss_dssp CCBCCCSCH
T ss_pred CccccccCH
Confidence 999999973
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.4e-71 Score=567.14 Aligned_cols=322 Identities=34% Similarity=0.513 Sum_probs=305.1
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 143 (392)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER 87 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345899999999877789999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC--C----CCeeEEEecccceEEEEcCCcccH
Q 016240 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPL 217 (392)
Q Consensus 144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~GVv~~i~p~n~P~ 217 (392)
.++|++++++|+|||+.++.. |+..+++.++|++.+.+++.+...+.. . +...++.++|+|||++|+|||||+
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 88 KEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 999999999999999999874 999999999999999888766544322 1 456788999999999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (392)
Q Consensus 218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~ 297 (392)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||+||+|.||||+.+|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987889999999999999999999999999
Q ss_pred HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (392)
Q Consensus 298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG 377 (392)
|++.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999886 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCC
Q 016240 378 DPFKGGIQQGPQVNQ 392 (392)
Q Consensus 378 ~p~~~~~~~Gpli~~ 392 (392)
||+ +++++||+|++
T Consensus 324 ~p~-~~~~~gpli~~ 337 (505)
T 3prl_A 324 SPE-DDADITPVIDE 337 (505)
T ss_dssp CTT-TTCSBCCCSCH
T ss_pred CCC-CcCcCCcccCH
Confidence 999 99999999973
No 25
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3.4e-71 Score=562.79 Aligned_cols=321 Identities=37% Similarity=0.620 Sum_probs=304.8
Q ss_pred cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (392)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (392)
.++||||+|+... ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999643 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (392)
Q Consensus 146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 224 (392)
+|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+. ..+...+..++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 999999999999999986 499999999999999988877665443 235677899999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEe---CCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (392)
Q Consensus 225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~---g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~ 301 (392)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |++.+.++.|..||+||+|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8667789999999999999999999999999999
Q ss_pred hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc-CccCCCC
Q 016240 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF 380 (392)
Q Consensus 302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~vG~p~ 380 (392)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|||+
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 997 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccccCCCC
Q 016240 381 KGGIQQGPQVNQ 392 (392)
Q Consensus 381 ~~~~~~Gpli~~ 392 (392)
|+++++||||++
T Consensus 327 ~~~~~~gpli~~ 338 (487)
T 2w8n_A 327 EEGTTQGPLINE 338 (487)
T ss_dssp STTCCBCCCSSH
T ss_pred cccCcccCCCCH
Confidence 999999999973
No 26
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.3e-71 Score=561.37 Aligned_cols=324 Identities=30% Similarity=0.492 Sum_probs=305.7
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 143 (392)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 346899999999877889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC--CCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (392)
Q Consensus 144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (392)
.++|++++++|+|||+.++.. |+..+++.++|++.+.+.+.+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999875 999999999999999888777655532 35678999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240 222 WKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (392)
Q Consensus 222 ~~~~~ALaaGN~VIlKps~~~p~t~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~ 300 (392)
+++++||++||+||+|||+.+|+++ .+|.++|.++|+|+|+||+|+|++.+.++.|..||+||+|.||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999977778999999999999999999999999999
Q ss_pred HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (392)
Q Consensus 301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~ 380 (392)
.+++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCC
Q 016240 381 KGGIQQGPQVN 391 (392)
Q Consensus 381 ~~~~~~Gpli~ 391 (392)
|+++++||+++
T Consensus 321 ~~~~~~gpli~ 331 (485)
T 4dng_A 321 DPKTVVGPLIN 331 (485)
T ss_dssp STTCSBCCCSS
T ss_pred cCCCccCCCCC
Confidence 99999999997
No 27
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=5.2e-71 Score=561.02 Aligned_cols=322 Identities=34% Similarity=0.567 Sum_probs=305.8
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 143 (392)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 456899999999987889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (392)
Q Consensus 144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (392)
.++|++++++|+|||+.++...|+..+++.+++++...+++.+... +...++.++|+|||++|+|||||+...+++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999998567999999999999999888765432 235788999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988789999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~ 383 (392)
+ +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCC
Q 016240 384 IQQGPQVNQ 392 (392)
Q Consensus 384 ~~~Gpli~~ 392 (392)
+++|||+++
T Consensus 319 ~~~gpli~~ 327 (478)
T 3ty7_A 319 TQVGPIISK 327 (478)
T ss_dssp CCBCCCSCH
T ss_pred CccCCCcCH
Confidence 999999973
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.5e-70 Score=560.69 Aligned_cols=328 Identities=35% Similarity=0.571 Sum_probs=309.8
Q ss_pred CCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (392)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l 140 (392)
..+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 456667899999999877889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC--CCCeeEEEecccceEEEEcCCcccHH
Q 016240 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLL 218 (392)
Q Consensus 141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (392)
+++.++|++++++|+|||..++.. |+..+++.++|++.+.+++.+ ..+.. .+...++.++|+|||++|+|||||+.
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999875 999999999999998877665 44422 35678899999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240 219 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (392)
Q Consensus 219 ~~~~~~~~ALaaGN~VIlKps~~~p~t~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~ 297 (392)
..++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|+|++.+.++.|+.||+||+|.||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999977888999999999999999999999999
Q ss_pred HHHHhhhC-CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240 298 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (392)
Q Consensus 298 i~~~aa~~-~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v 376 (392)
|++.+++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988742 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCC
Q 016240 377 GDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 377 G~p~~~~~~~Gpli~~ 392 (392)
|||+|+++++||||++
T Consensus 324 G~p~~~~~~~gpli~~ 339 (508)
T 3r64_A 324 GDPSAEGTLVGPVIND 339 (508)
T ss_dssp SCTTSSSCCBCCCSCH
T ss_pred CCCccCCCcccCCCCH
Confidence 9999999999999973
No 29
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.2e-70 Score=562.33 Aligned_cols=321 Identities=31% Similarity=0.492 Sum_probs=303.1
Q ss_pred cCceeCCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (392)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (392)
.++||||+|+. ++++++++||. ||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999995 46799999999 6999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC--CCCCCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (392)
Q Consensus 145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (392)
++|++++++|+|||+.++. .|+..+++.++||+...+++.+...+ ...+...++.++|+|||++|+|||||+...++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999986 69999999999999999888765532 22345678899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (392)
Q Consensus 223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a 302 (392)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999998
Q ss_pred hh-----CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (392)
Q Consensus 303 a~-----~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG 377 (392)
+. +++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 81 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCC
Q 016240 378 DPFKGGIQQGPQVNQ 392 (392)
Q Consensus 378 ~p~~~~~~~Gpli~~ 392 (392)
|| ++++++||||++
T Consensus 353 ~p-~~~~~~Gpli~~ 366 (516)
T 1uzb_A 353 PA-EENPDLGPVVSA 366 (516)
T ss_dssp CG-GGCCSBCCCSCH
T ss_pred CC-ccccccCCCCCH
Confidence 99 999999999973
No 30
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.3e-70 Score=557.78 Aligned_cols=314 Identities=30% Similarity=0.530 Sum_probs=294.4
Q ss_pred ceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 016240 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (392)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (392)
+||||+|+.+ ++ ++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999964 56 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHH
Q 016240 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (392)
Q Consensus 148 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 227 (392)
++++++|+|||..++. .|+..+++.++|++.+.+++.+...+.. +...++.++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999976 5999999999999999988876665543 5678899999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 228 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 228 LaaGN~VIlKps~~~p~t~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
|++||+||+|||+.+|+++..+++++.++ |+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999999875
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~ 383 (392)
+||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCC
Q 016240 384 IQQGPQVN 391 (392)
Q Consensus 384 ~~~Gpli~ 391 (392)
+++||||+
T Consensus 312 ~~~gpli~ 319 (486)
T 3pqa_A 312 TDVGPLIS 319 (486)
T ss_dssp CSBCCCSC
T ss_pred CCcCCCCC
Confidence 99999997
No 31
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-70 Score=557.81 Aligned_cols=322 Identities=30% Similarity=0.486 Sum_probs=303.8
Q ss_pred ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (392)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (392)
..++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999876788999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC-CCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (392)
Q Consensus 145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (392)
++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.++..+ ...+...+..++|+|||++|+|||||+...+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999999875 69999999999999877776665433 123456788999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (392)
Q Consensus 224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa 303 (392)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.+..|+.||+||+|.||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999998
Q ss_pred hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcE-EEEeCcchHHHHHHHHHHHhcCccCCCCCC
Q 016240 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (392)
Q Consensus 304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~ 382 (392)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|||+|+
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 7 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccccCCCC
Q 016240 383 GIQQGPQVNQ 392 (392)
Q Consensus 383 ~~~~Gpli~~ 392 (392)
++++||+|++
T Consensus 319 ~~~~gpli~~ 328 (486)
T 1t90_A 319 GVFLGPVIRE 328 (486)
T ss_dssp TCCBCCCSCH
T ss_pred CCccCCCCCH
Confidence 9999999973
No 32
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.3e-70 Score=557.34 Aligned_cols=320 Identities=30% Similarity=0.485 Sum_probs=300.7
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 143 (392)
+.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 78 (475)
T 1euh_A 3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 78 (475)
T ss_dssp CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 3457899999997533 999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CC----Cee-EEEecccceEEEEcCCcccH
Q 016240 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPL 217 (392)
Q Consensus 144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~ 217 (392)
.++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+.. .+ ... ++.++|+|||++|+|||||+
T Consensus 79 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 157 (475)
T 1euh_A 79 KEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157 (475)
T ss_dssp HHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence 99999999999999999975 5999999999999998887765543322 23 456 89999999999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (392)
Q Consensus 218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~ 297 (392)
...++++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.
T Consensus 158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999999999999999999999999999999976778999999999999999999999999
Q ss_pred HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (392)
Q Consensus 298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG 377 (392)
|++.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (475)
T 1euh_A 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 314 (475)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999876 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCC
Q 016240 378 DPFKGGIQQGPQVNQ 392 (392)
Q Consensus 378 ~p~~~~~~~Gpli~~ 392 (392)
||+| ++++|||+++
T Consensus 315 ~p~~-~~~~gpli~~ 328 (475)
T 1euh_A 315 NPED-DADITPLIDT 328 (475)
T ss_dssp CGGG-TCSBCCCSCH
T ss_pred Cccc-cCccCCCCCH
Confidence 9999 9999999973
No 33
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.7e-70 Score=556.85 Aligned_cols=322 Identities=28% Similarity=0.482 Sum_probs=302.6
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 143 (392)
..++.||||+|+. ++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 3578999999994 678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (392)
Q Consensus 144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (392)
.++|++++++|+|||+.++ ..|+..+++.++|++.+.+++.+...+.. .+...+..++|+|||++|+|||||+...++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 9999999999999999987 46999999999999998877766554432 244567889999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHH
Q 016240 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (392)
Q Consensus 223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~----~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i 298 (392)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999988876 46999999999999 77889999999999999999999999999
Q ss_pred HHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCC
Q 016240 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (392)
Q Consensus 299 ~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~ 378 (392)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCC
Q 016240 379 PFKGGIQQGPQVNQ 392 (392)
Q Consensus 379 p~~~~~~~Gpli~~ 392 (392)
|.|+++++|||+++
T Consensus 335 p~~~~~~~gpli~~ 348 (500)
T 2j6l_A 335 PWDPNVLYGPLHTK 348 (500)
T ss_dssp TTSTTCCBCCCSCH
T ss_pred cccCCCccccCCCH
Confidence 99999999999973
No 34
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2.2e-70 Score=558.22 Aligned_cols=322 Identities=28% Similarity=0.389 Sum_probs=302.3
Q ss_pred CCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (392)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~ 142 (392)
+...++||||+|+.. + ++++++||.||+++++++.++.+|+++++++|++||+. .|+.++.++|.++|+++++.|++
T Consensus 16 ~~~~~~~i~g~~~~~-~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~ 92 (501)
T 1uxt_A 16 VPVYPSYLAGEWGGS-G-QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIER 92 (501)
T ss_dssp EEEECEECSSSEECC-S-CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CcccceeECCEEecC-C-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHH
Confidence 335578999999975 3 78999999999999999999999999999999999862 49999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC---CC--CCeeEEEecccceEEEEcCCcccH
Q 016240 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPL 217 (392)
Q Consensus 143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~P~GVv~~i~p~n~P~ 217 (392)
+.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+. .. +...++.++|+|||++|+|||||+
T Consensus 93 ~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 171 (501)
T 1uxt_A 93 NLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPL 171 (501)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHH
Confidence 999999999999999999987 699999999999999988876655443 22 336789999999999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (392)
Q Consensus 218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~ 297 (392)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.++.|..||+||+|+||||+.+|+.
T Consensus 172 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~ 250 (501)
T 1uxt_A 172 FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGER 250 (501)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976 88999999999999999999999999
Q ss_pred HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (392)
Q Consensus 298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG 377 (392)
|++.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 251 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 327 (501)
T 1uxt_A 251 VVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG 327 (501)
T ss_dssp HHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCC
Confidence 999886 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCC
Q 016240 378 DPFKGGIQQGPQVNQ 392 (392)
Q Consensus 378 ~p~~~~~~~Gpli~~ 392 (392)
||+|+++++||||++
T Consensus 328 ~p~~~~~~~Gpli~~ 342 (501)
T 1uxt_A 328 DPRDPTVDVGPLISP 342 (501)
T ss_dssp CTTSTTCSBCCCSCH
T ss_pred CccccCCcccCCCCH
Confidence 999999999999973
No 35
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.2e-69 Score=548.93 Aligned_cols=319 Identities=32% Similarity=0.448 Sum_probs=301.9
Q ss_pred CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (392)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (392)
++||||+|+.. +++++.++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999975 457899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (392)
Q Consensus 147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ 226 (392)
|++++++|+|||+.++. .|+..+++.++|++...+.+.+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999986 59999999999999988887766543223445677799999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCC
Q 016240 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (392)
Q Consensus 227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~ 306 (392)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+.++.|..||+||+|+||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999999999999999999 67889999999999999999999999999999987 8
Q ss_pred CccE-EEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcc-hHHHHHHHHHHHhcCccCC-CCCCC
Q 016240 307 LKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGG 383 (392)
Q Consensus 307 ~~~v-~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~L~~~~~~~~vG~-p~~~~ 383 (392)
++|+ ++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++ ||+|+++|+++++++++|| |.|++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccccCCC
Q 016240 384 IQQGPQVN 391 (392)
Q Consensus 384 ~~~Gpli~ 391 (392)
+++|||++
T Consensus 321 ~~~Gpli~ 328 (490)
T 3ju8_A 321 PFMGAVIS 328 (490)
T ss_dssp CSBCCCSC
T ss_pred CccccccC
Confidence 99999997
No 36
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.7e-69 Score=549.15 Aligned_cols=306 Identities=27% Similarity=0.449 Sum_probs=294.6
Q ss_pred eeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhh
Q 016240 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161 (392)
Q Consensus 82 ~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 161 (392)
+++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 489999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCC
Q 016240 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (392)
Q Consensus 162 a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 241 (392)
+. .|+..+++.++|++..++++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 87 69999999999999999988776555445678899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEE
Q 016240 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (392)
Q Consensus 242 ~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~i 321 (392)
+|+++..|++++.++|+|+|++|+|+|++.+.++ |..||+||+|+||||+.+|+.|++.+++ ++||+++|+|||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999997777788 9999999999999999999999999998 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 322 V~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~ 392 (392)
|++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++||||++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 310 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSE 310 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999973
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.1e-68 Score=548.79 Aligned_cols=324 Identities=26% Similarity=0.342 Sum_probs=301.3
Q ss_pred CCccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240 63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (392)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~ 141 (392)
...+++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|+
T Consensus 61 ~~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~ 136 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLS 136 (563)
T ss_dssp CEECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 356789999999974 34678999998 899999999999999999999999999 9999999999999999999999
Q ss_pred hc-HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHH
Q 016240 142 RH-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (392)
Q Consensus 142 ~~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (392)
++ +++|+.++++|+|||+.++...++..+++.++|++.+++++.+..... ..+...+.++.|+|||++|+|||||+..
T Consensus 137 ~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~ 216 (563)
T 4e3x_A 137 GPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIG 216 (563)
T ss_dssp TTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred hccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHH
Confidence 98 999999999999999999876459999999999999998887654322 2234456677788999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (392)
Q Consensus 220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~ 299 (392)
..++++||| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.++++.|..||+|++|.||||+.+|+.|+
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~ 295 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW 295 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 999999999 6999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhhhCCCc------cEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240 300 QLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (392)
Q Consensus 300 ~~aa~~~~~------~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~ 373 (392)
+.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 296 ~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~ 374 (563)
T 4e3x_A 296 RQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR 374 (563)
T ss_dssp HHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred HHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence 99997 777 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCC-CCCCCccccCCCC
Q 016240 374 RVVGDP-FKGGIQQGPQVNQ 392 (392)
Q Consensus 374 ~~vG~p-~~~~~~~Gpli~~ 392 (392)
+++||| +|++++|||||++
T Consensus 375 l~vGdp~~d~~~~~Gpli~~ 394 (563)
T 4e3x_A 375 IKVGDPAEDFGTFFSAVIDA 394 (563)
T ss_dssp CCBSCTTTCTTCSBCCCSCH
T ss_pred ccCCCcccCcCCccCCCcCH
Confidence 999999 9999999999973
No 38
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.2e-67 Score=571.30 Aligned_cols=324 Identities=31% Similarity=0.501 Sum_probs=307.1
Q ss_pred CccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (392)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~ 142 (392)
...++||||+|+. ++++++++||.| ++++++++.++.+++++|+++|++||+ .|+.+++++|.++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3568999999996 578999999998 999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (392)
Q Consensus 143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (392)
++++|+.++++|+|||+.++. .|+..+++.++||+.+++++.+...+. ..+..++..++|+|||++|+|||||+...+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 999999999999999999976 599999999999999998887654332 346678889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (392)
Q Consensus 222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~ 301 (392)
+++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.++++.|+.||+|++|+||||+++|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhh-----CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (392)
Q Consensus 302 aa~-----~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v 376 (392)
++. +++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 883 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCC
Q 016240 377 GDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 377 G~p~~~~~~~Gpli~~ 392 (392)
|||.|+++++||||++
T Consensus 845 G~p~d~~t~~Gpvi~~ 860 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADD 860 (1026)
T ss_dssp CCTTSTTCSBCCCSSH
T ss_pred CCcccccCccccccCH
Confidence 9999999999999973
No 39
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=4.4e-67 Score=530.31 Aligned_cols=308 Identities=28% Similarity=0.450 Sum_probs=293.0
Q ss_pred CCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC
Q 016240 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (392)
Q Consensus 79 ~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 158 (392)
+..+++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 456799999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEec
Q 016240 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (392)
Q Consensus 159 ~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKp 238 (392)
..++. .|+..+++.++|++.+.+++.+.......+...++.++|+|||++|+|||||++..++++++||++||+||+||
T Consensus 83 ~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 99976 59999999999999998887765532223566789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCC
Q 016240 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (392)
Q Consensus 239 s~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~ 318 (392)
|+.+|+++..|+++|.++|+|+|++|+|+| +.+.+..|+.||+|+.|+||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 45778899999999999999999999999999998 8999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391 (392)
Q Consensus 319 ~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~ 391 (392)
|+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||.|+++++|||++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~ 312 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMAR 312 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSC
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=4e-67 Score=538.77 Aligned_cols=319 Identities=25% Similarity=0.347 Sum_probs=290.1
Q ss_pred ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERH 143 (392)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 143 (392)
..++||||+|+...+ .+++++||.||+++++++.++ +|+++++++|++| |+ .|+.++.++|.++|+++++.|+++
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 457899999997543 589999999999999999987 9999999999999 58 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCc-------cCCCC--CCCeeEEEeccc-ceEEEEcCC
Q 016240 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-------TAPAD--GPYHVQTLHEPI-GVAGQIIPW 213 (392)
Q Consensus 144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-------~~~~~--~~~~~~~~~~P~-GVv~~i~p~ 213 (392)
.++|++++++|+|||+.++. .|+..+++.++||+.+.+++.+. ..+.. .....+..++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 99999999999999999986 59999999999999988776432 11221 122457889997 999999999
Q ss_pred cccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCCchhHHHHHHcC-CCcCEEEeeCC
Q 016240 214 NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGS 291 (392)
Q Consensus 214 n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~l~~~-~~vd~V~ftGs 291 (392)
|||+...++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||+|+|++.+ +..+ +++|+|+||||
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS 237 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS 237 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence 99999999999999999999999999999999999999999999 899999999986543 3333 57999999999
Q ss_pred hHHHHHHHHHhh-hCCCccEEEecCCCCcEEEcCCC-----CHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHH
Q 016240 292 TTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365 (392)
Q Consensus 292 ~~~g~~i~~~aa-~~~~~~v~lelgG~~~~iV~~dA-----Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~ 365 (392)
+.+|+.|++.++ ..++||+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 238 ~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 317 (534)
T 2y53_A 238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317 (534)
T ss_dssp HHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHH
Confidence 999999998875 23899999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCccCCCCCCCCccccCCCC
Q 016240 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 366 ~L~~~~~~~~vG~p~~~~~~~Gpli~~ 392 (392)
+|+++++++++|||+|+++++||||++
T Consensus 318 ~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 318 ALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp HHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred HHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 999999999999999999999999973
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1e-65 Score=521.38 Aligned_cols=306 Identities=27% Similarity=0.369 Sum_probs=286.0
Q ss_pred CCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCC
Q 016240 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (392)
Q Consensus 78 ~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 157 (392)
...++++++||+||+++++++.++.+|+++++++|++||+ .|++++.++|.++|+++++.|++|.++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhhchhHHHHHHHHHHHHHHhhcCccC-C-CCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEE
Q 016240 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235 (392)
Q Consensus 158 ~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VI 235 (392)
+... . .|+...++.+++++....++..... + ...+...+..++|+|||++|+|||||+...++++++||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8644 3 5999999999999988877654322 2 123455677889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecC
Q 016240 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (392)
Q Consensus 236 lKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelg 315 (392)
+|||+.+|+++..+.+++.++|+|+|++++++| +.+.+..|..| +|+|.||||+.+|+.|++.+++ ++||+++|+|
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 56778888876 9999999999999999999998 8999999999
Q ss_pred CCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391 (392)
Q Consensus 316 G~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~ 391 (392)
||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+++++++||+++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 310 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIA 310 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSS
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997
No 42
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.7e-64 Score=517.03 Aligned_cols=315 Identities=24% Similarity=0.328 Sum_probs=285.9
Q ss_pred CCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (392)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l 140 (392)
+....++||||+|+.+.+ ++||.||++++ +++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|
T Consensus 26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 98 (528)
T 3v4c_A 26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEI 98 (528)
T ss_dssp CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHH
T ss_pred cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 445568999999996432 99999999998 9999999999999999999999 999999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhh--cCccC----CC---CCCCeeEEEecccceEEEEc
Q 016240 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQII 211 (392)
Q Consensus 141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~P~GVv~~i~ 211 (392)
+++.++|++++++|+|||+.++. .|+..+++.++||+...++. .+... +. ..+...++.++|+|||++|+
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 177 (528)
T 3v4c_A 99 EARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFG 177 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEEC
T ss_pred HHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEEC
Confidence 99999999999999999998876 59999999999999988872 22221 11 12345688999999999999
Q ss_pred CCcccHHHHH--HHHHHHHhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCeEEEEeCCchhHHHHHHcCCCcCE
Q 016240 212 PWNFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285 (392)
Q Consensus 212 p~n~P~~~~~--~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~ 285 (392)
|||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|+||+|+|++.+.++.|+.||+||+
T Consensus 178 PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~ 257 (528)
T 3v4c_A 178 ASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKA 257 (528)
T ss_dssp CSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCE
T ss_pred CCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCE
Confidence 9999999865 99999999999999999999999999999875 46899999999999988889999999999999
Q ss_pred EEeeCChHHHHHHHHHhhhCCC--ccEEEecCCCCcEEEcCCC---CHHHHHHHHHHHHHhccCCcccCCcEEEEeCc-c
Q 016240 286 LAFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-V 359 (392)
Q Consensus 286 V~ftGs~~~g~~i~~~aa~~~~--~~v~lelgG~~~~iV~~dA---Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i 359 (392)
|+||||+.+|+.|++.+++ ++ ||+++|+|||||+||++|| |+|.|++.+++++|+|+||.|++++|||||++ +
T Consensus 258 V~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i 336 (528)
T 3v4c_A 258 VGFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGAD 336 (528)
T ss_dssp EEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHH
T ss_pred EEEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccH
Confidence 9999999999999999997 77 9999999999999999999 88999999999999999999999999999997 9
Q ss_pred hHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391 (392)
Q Consensus 360 ~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~ 391 (392)
||+|+++|++++++++.| +.+||+++
T Consensus 337 ~d~f~~~l~~~~~~~~~~------~~~gp~~~ 362 (528)
T 3v4c_A 337 ADRFTTAAVEALAKVAPQ------TMLTDGIA 362 (528)
T ss_dssp HHHHHHHHHHHHHTCCCE------ECSCHHHH
T ss_pred HHHHHHHHHHHHHhcccC------CCCCHHHH
Confidence 999999999999998754 56788764
No 43
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.3e-63 Score=501.97 Aligned_cols=302 Identities=27% Similarity=0.385 Sum_probs=266.6
Q ss_pred CCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh
Q 016240 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF 159 (392)
Q Consensus 80 ~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 159 (392)
-..+++.||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||+
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPK 82 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 35688999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hhhhhhchhHHHHHHHHHHHHHHhhcCc-cCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEE
Q 016240 160 EQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235 (392)
Q Consensus 160 ~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VI 235 (392)
.++...|+..+++.++|++...+++.+. ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||
T Consensus 83 ~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 162 (457)
T 3lns_A 83 DVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCI 162 (457)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 9987569999999999999988876543 2221 13467889999999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecC
Q 016240 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (392)
Q Consensus 236 lKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelg 315 (392)
+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.+..|+. ++||+|+||||+++|+.|++.+++ ++||+++|+|
T Consensus 163 lKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElG 238 (457)
T 3lns_A 163 IKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELG 238 (457)
T ss_dssp EECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECC
T ss_pred EECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECC
Confidence 999999999999999999998 99999999999 6778889988 689999999999999999999997 8999999999
Q ss_pred CCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 316 G~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~ 392 (392)
||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|++++++++ |.++ ++|||+++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~ 310 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTE 310 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999987 7776 99999973
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.6e-62 Score=502.00 Aligned_cols=297 Identities=23% Similarity=0.334 Sum_probs=272.4
Q ss_pred CCCCCeeeeeCCCCCCEE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc
Q 016240 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (392)
Q Consensus 77 ~~~~~~~~v~~P~tge~i-~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 155 (392)
+.++++++++||.||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 346788999999999999 79999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCChhhhhhhchhHHHHHHHHHHHHHHh--hcCccC----CC--CCC-CeeEEEecccceEEEEcCCcccHHHH--HHHH
Q 016240 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKV 224 (392)
Q Consensus 156 Gk~~~~a~~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~ 224 (392)
|||+.++. .|+..+++.++||+...++ ..+..+ +. ..+ ...+..++|+|||++|+|||||+... .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998864 5999999999999998876 333222 11 111 23578999999999999999999985 4999
Q ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240 225 GPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (392)
Q Consensus 225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~ 300 (392)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977788999999999999999999999999999
Q ss_pred HhhhCCC--ccEEEecCCCCcEEEcCCCCHH--HHHHHHHHHHHhccCCcccCCcEEEEeCc-chHHHHHHHHHHHhcCc
Q 016240 301 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 375 (392)
Q Consensus 301 ~aa~~~~--~~v~lelgG~~~~iV~~dADl~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~ 375 (392)
.+++ ++ ||+++|+|||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9997 64 9999999999999999999999 99999999999999999999999999999 99999999999999998
Q ss_pred cC
Q 016240 376 VG 377 (392)
Q Consensus 376 vG 377 (392)
+|
T Consensus 319 ~g 320 (510)
T 1ez0_A 319 PS 320 (510)
T ss_dssp CB
T ss_pred CC
Confidence 65
No 45
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=4.3e-61 Score=519.00 Aligned_cols=292 Identities=33% Similarity=0.478 Sum_probs=278.6
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHH
Q 016240 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (392)
Q Consensus 97 v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 176 (392)
++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|+++.++|+++++.|+|||+.++. .|+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence 789999999999999999999 99999999999999999999999999999999999999999975 599999999999
Q ss_pred HHHHHHhhcCcc--CCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 016240 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (392)
Q Consensus 177 ~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~ 254 (392)
|+...+++.+.. .+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998876653 344456788899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC--CCccEEEecCCCCcEEEcCCCCHHHHH
Q 016240 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 332 (392)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~--~~~~v~lelgG~~~~iV~~dADl~~a~ 332 (392)
++|+|+|+||+|+|++.. +..|+.||+||+|+||||+++|+.|++.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999997777 99999999999999999999999999999863 489999999999999999999999999
Q ss_pred HHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 333 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~ 392 (392)
+.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|||.++++++||||++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~ 839 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDV 839 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCH
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999973
No 46
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1e-60 Score=483.44 Aligned_cols=287 Identities=26% Similarity=0.346 Sum_probs=261.1
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHH
Q 016240 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (392)
Q Consensus 99 ~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (392)
..+.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..++..+++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467799999999999999 99999999999999999999999999999999999999999987679999999999888
Q ss_pred HHHHhhcCccC----CCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 016240 179 GWADKIQGLTA----PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (392)
Q Consensus 179 ~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~ 254 (392)
........... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 76655432211 11224567899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHH
Q 016240 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (392)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~ 334 (392)
++ +|+|++|+|+|+ .+.+..|+.| +||+|+||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.
T Consensus 172 ~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 172 QY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp HH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred Hh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 98 999999999994 4455677777 89999999999999999999997 89999999999999999999999999999
Q ss_pred HHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392 (392)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~ 392 (392)
+++++|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||||++
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~ 304 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISA 304 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCH
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCH
Confidence 9999999999999999999999999999999999999998 69999999999999973
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=6.8e-57 Score=455.56 Aligned_cols=287 Identities=17% Similarity=0.227 Sum_probs=248.8
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHH
Q 016240 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (392)
Q Consensus 96 ~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 175 (392)
+++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++...+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3456678999999999999999 99999999999999999999999999999999999999988765444444444443
Q ss_pred HHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHH----
Q 016240 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK---- 251 (392)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~---- 251 (392)
++....+ ..+. .+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3332211 1111 122345677889999999999999999999999999999999999999999999999998665
Q ss_pred HHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecC-CCCcEEEcCCCCHHH
Q 016240 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDK 330 (392)
Q Consensus 252 ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelg-G~~~~iV~~dADl~~ 330 (392)
++.++|+|+|+||+|++++.+.++.|+.||+||+|+||||+.+ ++.+++ ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 4688999999999999987889999999999999999999985 445554 88999 7888 999999999999999
Q ss_pred HHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHH-------hcCccCCCC-CCCCccccCCCC
Q 016240 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQVNQ 392 (392)
Q Consensus 331 a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~-------~~~~vG~p~-~~~~~~Gpli~~ 392 (392)
|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~ 304 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVG 304 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCH
Confidence 99999999999999999999999999999999999999985 567899998 789999999863
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-56 Score=449.99 Aligned_cols=277 Identities=19% Similarity=0.167 Sum_probs=228.4
Q ss_pred eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc-------C
Q 016240 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (392)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------G 156 (392)
-++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred CChh----hhhhhchhHHHHHHHHHHHHHHhhcCccCCCC---CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHh
Q 016240 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229 (392)
Q Consensus 157 k~~~----~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALa 229 (392)
||+. ++. .|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 344 6999999999999988877766543321 3445688999999999999887 77766 89999999
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC
Q 016240 230 CGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (392)
Q Consensus 230 aGN~VIlKps~~~p~t~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~ 305 (392)
+||+||+|||+.+|+++..|++++.++ | |+|+||+|+| +.++++.|..||+||+|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6678999999999999999999999999999886
Q ss_pred CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchH-HHHHHHHHHH
Q 016240 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD-QFVEKANALA 371 (392)
Q Consensus 306 ~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~-~f~~~L~~~~ 371 (392)
+||+++|+|||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++|| .+++++.+.+
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~ 305 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDML 305 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHH
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHH
Confidence 799999999999999999999999999999999999 999999999999999997 3556665554
No 49
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-54 Score=437.56 Aligned_cols=264 Identities=19% Similarity=0.252 Sum_probs=230.0
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHH-H
Q 016240 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (392)
Q Consensus 97 v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 175 (392)
++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.++++.++|++++++|+|||..++...|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999 9999999999999999999999999999999999999999987655776677766 3
Q ss_pred HHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH-
Q 016240 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (392)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~- 254 (392)
++.. .+..+ .++.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3332 11111 1222334567889999999999999999999999999999999999999999999999999888875
Q ss_pred ---HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHH
Q 016240 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (392)
Q Consensus 255 ---~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a 331 (392)
++|+|+|+||+|++++.+.++.|+.||+|++|.||||+.+++ .++. ++||+++|+|||+|+||++|||+|.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998654 4444 78999999999999999999999999
Q ss_pred HHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHH
Q 016240 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 370 (392)
Q Consensus 332 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~ 370 (392)
++.+++++|+|+||.|+++++||||+++||+|+++|+++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 269 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH 269 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999875
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=5.5e-54 Score=431.82 Aligned_cols=269 Identities=20% Similarity=0.221 Sum_probs=232.9
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh----hhhh-------hchhHH
Q 016240 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (392)
Q Consensus 102 ~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 170 (392)
.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 99999999999999999999999999999999999999853 4432 378889
Q ss_pred HHHHHHHHHHHHhhcCccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHH
Q 016240 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (392)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~ 247 (392)
++.+++++.+.+.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999876542 333321 23567889999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCeEEEEeCCch-hHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEE
Q 016240 248 YVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (392)
Q Consensus 248 ~l~~ll----~~aGlP~g~v~vv~g~~~-~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV 322 (392)
.+++++ .++|+|+|+||+|+|.+. ..++.|..||+||+|+||||+.+|+.|++.+ +||+++|+|||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998554 5788888999999999999999999998775 5899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc---CCCC
Q 016240 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPF 380 (392)
Q Consensus 323 ~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v---G~p~ 380 (392)
++|||+|.|++.+++++|+|+| .|++++|||||+++||+|+++|+++++++++ |||.
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~ 315 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD 315 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH
Confidence 9999999999999999999999 9999999999999999999999999999998 8764
No 51
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=3.6e-54 Score=435.14 Aligned_cols=266 Identities=18% Similarity=0.207 Sum_probs=240.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh----hhhhhhchhH-HHHHHHHHH
Q 016240 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (392)
Q Consensus 104 ~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~a 178 (392)
.+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||. .++...|+.. ++..+++++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 48899999999999 9999999999999999999999999999999999999998 7765569999 999999999
Q ss_pred HHHHhhc------CccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHH
Q 016240 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (392)
Q Consensus 179 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l 249 (392)
...+.+. +...+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887765 333221 12445688999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEE
Q 016240 250 SKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (392)
Q Consensus 250 ~~ll~----~----aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~i 321 (392)
++++. + +|+|+|+||+|+ ++.++++.|..||+||+|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667889999999999999999999999998876 589999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc---CCCC
Q 016240 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPF 380 (392)
Q Consensus 322 V~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v---G~p~ 380 (392)
|++|||+|.|++.+++++|+|+| .|++++|||||+++ |+|+++|+++++++++ |||.
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~ 305 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKD 305 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHH
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHH
Confidence 99999999999999999999999 99999999999999 9999999999999998 8874
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=2.8e-53 Score=424.68 Aligned_cols=265 Identities=20% Similarity=0.207 Sum_probs=239.5
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh----hhhh-------hhchhHH
Q 016240 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSA-------QTEVPMT 170 (392)
Q Consensus 102 ~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-------~~ev~~~ 170 (392)
.+++++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+||+. .++. ..|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 5689999999999999 9999999999999999999999999999999999999885 4443 2589999
Q ss_pred HHHHHHHHHHHHhhcCccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHH
Q 016240 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (392)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~ 247 (392)
++.+++|+.+.+. .+...+. ..+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999987765 3433321 22455688999999999999875 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCeEEEEeCC-chhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEE
Q 016240 248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (392)
Q Consensus 248 ~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV 322 (392)
.|++++. ++|+|+|++|+|+|. .+..++.|..||+||+|+||||+.+|+.|++.+ +||+++|+|||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 689999999999984 456788999999999999999999999999886 4899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (392)
Q Consensus 323 ~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v 376 (392)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 296 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGV 296 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999 9999999999999999999999999999876
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=84.09 E-value=32 Score=33.28 Aligned_cols=165 Identities=16% Similarity=0.117 Sum_probs=93.6
Q ss_pred CCCeeEEEecccceEEEEcCC---cccHHHHHHHHHHHHhcCCE-EEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeC
Q 016240 193 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNT-IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (392)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~ALaaGN~-VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g 268 (392)
.|......+.|+--|++..|. .||- +++..++||-.+|+. +|+..++..-...-.+.-..+.+|+. .+..-
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~Gv~----eIy~v 193 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYISGVD----RVFRI 193 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHHTCC----EEECC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhcCCc----EEEEc
Confidence 466677889999999999995 3554 345568999999996 44443332111222233334455664 23332
Q ss_pred CchhHHHHHHc----CCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCc--EEEcCCCCHHHHHHHHHHHHHhc
Q 016240 269 YGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP--FIVCEDADVDKAAELAHYALFFN 342 (392)
Q Consensus 269 ~~~~~~~~l~~----~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~--~iV~~dADl~~a~~~i~~~~~~~ 342 (392)
.|...-.+|.- -|.||+|+=.|..=+...=.+.. +..-+=+. .|-+= +|-++++|.+..+..++--+=+.
T Consensus 194 GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~---g~VgIDm~-AGPSEilViAD~~a~p~~vAaDLlsQAEHd 269 (423)
T 4gic_A 194 GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF---GQVGIDMV-AGPSEILVISDGRTDPDWIAMDLFSQAEHD 269 (423)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB---TTBEECCC-CCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred CChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc---CCcCcccc-cccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence 24444444432 57899999999886654221111 21112122 23333 33345699999988877655444
Q ss_pred cCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (392)
Q Consensus 343 ~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~ 373 (392)
.. .+.++|..+ ++|.+++.+++.+
T Consensus 270 ~~-----a~~iLvT~s--~~la~~V~~~i~~ 293 (423)
T 4gic_A 270 ED-----AQAILISPD--AAHLEAVQASIER 293 (423)
T ss_dssp TT-----CEEEEEESC--HHHHHHHHHHHHH
T ss_pred CC-----CeEEEEeCc--HHHHHHHHHHHHH
Confidence 33 455777665 4555555554443
No 54
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=77.20 E-value=4.2 Score=34.74 Aligned_cols=122 Identities=18% Similarity=0.146 Sum_probs=65.0
Q ss_pred CCHHHHHHHHHHHHHHHH-hcHHHHHHHHHHhcCCCh-hhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEe
Q 016240 124 MTAYERSKIILRFADLLE-RHNDEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH 201 (392)
Q Consensus 124 ~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~e~Gk~~-~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 201 (392)
+..+.|.+.++++...=+ +..+||++.+..+ |-.. .++. +.+ ..+++.-..++...|...|...
T Consensus 29 ~k~~~r~~~I~eiI~~~~I~TQeEL~~~L~~~-Gi~viTQAT---vSR----------DIkELglvKv~~~~G~~~Y~lp 94 (180)
T 3v4g_A 29 EKQDNLVRAFKALLKEERFGSQGEIVEALKQE-GFENINQSK---VSR----------MLTKFGAVRTRNAKMEMVYCLP 94 (180)
T ss_dssp -CHHHHHHHHHHHHHHTCCCSHHHHHHHHHHT-TCTTCCHHH---HHH----------HHHHTTCEEEECTTSCEEEECC
T ss_pred ccHHHHHHHHHHHHhhCCcCCHHHHHHHHHHC-CCcccCHHH---HHH----------HHHHcCCEEeeCCCCCEEEEeC
Confidence 455566555444433221 4668999988766 7665 6642 111 1223333334433343333322
Q ss_pred cccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 016240 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (392)
Q Consensus 202 ~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~ 269 (392)
...+.-. ..-++... +...-..||-+|+|..|.. +..++.++...++|++++-.|.|+
T Consensus 95 ~~~~~~~----~~~~l~~~---vvsv~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 95 TELGVPT----VSSSLREL---VLDVDHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ------C----TTCCTGGG---EEEEEECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred Ccccchh----HHHHHHHH---EEEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 2111100 01111111 1112237999999988655 788999998888999999999984
No 55
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=59.66 E-value=31 Score=28.98 Aligned_cols=37 Identities=32% Similarity=0.544 Sum_probs=30.7
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 016240 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (392)
Q Consensus 229 aaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~ 269 (392)
..||-+|+|..|.. +..++.++...++| +++-.|.|+
T Consensus 110 ~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 110 DSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 47999999987654 78899999888877 699999884
No 56
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=58.92 E-value=14 Score=29.98 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=45.4
Q ss_pred HHHHHHcCCCCCeEEEEeCC-c----hhHHHHHHcCCCcCEEEeeCCh-----HHHHHHHHHhhhCCCccEEEec
Q 016240 250 SKLLHEAGLPPGVLNIVSGY-G----PTAGAALASHMEVDKLAFTGST-----TTGKIVLQLAAKSNLKPVTLEL 314 (392)
Q Consensus 250 ~~ll~~aGlP~g~v~vv~g~-~----~~~~~~l~~~~~vd~V~ftGs~-----~~g~~i~~~aa~~~~~~v~lel 314 (392)
++.|.+.|+|-..|+-++.. . +.+.+.+.+ ..|+.|++|-+. .-+..|.+.+.. +.+|++-.+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR~Av~-~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRRTAVD-SGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHHHHHH-TTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHHHHHH-hCCCeEcCH
Confidence 45567889998777766542 3 567777766 489999998765 367788888887 668877543
No 57
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=58.22 E-value=3.9 Score=33.24 Aligned_cols=82 Identities=16% Similarity=0.138 Sum_probs=52.3
Q ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCeEEEEe-CCchhHHHHHHcCCCcCEEEeeCC-------
Q 016240 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVS-GYGPTAGAALASHMEVDKLAFTGS------- 291 (392)
Q Consensus 221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~-aGlP~g~v~vv~-g~~~~~~~~l~~~~~vd~V~ftGs------- 291 (392)
+.+-...+..|..++- |..|+ +.|.+ .|+|-..++=++ +.++.+++.+.+ ..||.|+||-+
T Consensus 21 ~a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl~~~~h 90 (134)
T 2xw6_A 21 FCQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPLTAQPH 90 (134)
T ss_dssp HHHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTTTCCTT
T ss_pred HHHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCcccCCCc
Confidence 3333445556665553 33344 44455 799977776555 435567777765 58999999977
Q ss_pred hHHHHHHHHHhhhCCCccEEEe
Q 016240 292 TTTGKIVLQLAAKSNLKPVTLE 313 (392)
Q Consensus 292 ~~~g~~i~~~aa~~~~~~v~le 313 (392)
..-+..|.+.+.. +.+|+.-.
T Consensus 91 ~~D~~~IrR~A~~-~~IP~~T~ 111 (134)
T 2xw6_A 91 EPDVQALLRVCDV-HGVPLATN 111 (134)
T ss_dssp SCCSHHHHHHHHH-HTCCEECS
T ss_pred cchHHHHHHHHHH-cCCCeEcC
Confidence 2345778888887 55777643
No 58
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=57.38 E-value=78 Score=25.85 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=30.5
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 016240 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (392)
Q Consensus 230 aGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~ 269 (392)
.||-+|+|..|.. +..++.++...++|+ ++-.|.|+
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGD 125 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 125 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999988654 788999999888876 99999884
No 59
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=57.30 E-value=13 Score=32.99 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=45.5
Q ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (392)
Q Consensus 221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~ 297 (392)
+..++-.+.+||.||++.+. +.....+..+|..- +|.|.+.+++.+ .+. ...-..+.+.+..+...-..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcccCcc
Confidence 45567788899999999876 34555567777776 999999998642 121 11224566666666554443
No 60
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=56.11 E-value=22 Score=29.33 Aligned_cols=114 Identities=17% Similarity=0.114 Sum_probs=73.9
Q ss_pred ceEEEEcCC-cccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCeEEEEeC-CchhHHHHHHcCC
Q 016240 205 GVAGQIIPW-NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPTAGAALASHM 281 (392)
Q Consensus 205 GVv~~i~p~-n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~-aGlP~g~v~vv~g-~~~~~~~~l~~~~ 281 (392)
|.|+++..- .=+-...+.+-...+..|..++-= ..|+ +.|.+ .|+|-..++=++. .++.+++.+.+ .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~-g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALISE-G 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHC-C
Confidence 655554443 334445555566677789987752 2344 44555 7999776654442 24456666765 5
Q ss_pred CcCEEEeeCC-------hHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccC
Q 016240 282 EVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (392)
Q Consensus 282 ~vd~V~ftGs-------~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~G 344 (392)
.||.|+||-+ ..-+..|.+.|.. ..+|+...+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999876 4567889999987 667876543 346667778777764
No 61
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=56.03 E-value=33 Score=23.10 Aligned_cols=47 Identities=17% Similarity=0.257 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 016240 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALET 152 (392)
Q Consensus 100 ~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 152 (392)
.+.++.+..+++.-.|-+.|.|..- -+|+-+...|.+-+|.++..+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 4677878888888888888999764 5677888888888888877653
No 62
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=52.33 E-value=30 Score=24.40 Aligned_cols=56 Identities=23% Similarity=0.269 Sum_probs=39.4
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (392)
Q Consensus 230 aGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a 302 (392)
.+|-+|+|..|.. +..++.++.+.++|+ ++-.+.|++ + ..+..-+.+.++.+.+..
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDD-T------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCC-E------------EEEEECCHHHHHHHHHHH
Confidence 6899999987654 788999999888776 899998843 2 233444555555555544
No 63
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=51.45 E-value=33 Score=24.77 Aligned_cols=36 Identities=33% Similarity=0.574 Sum_probs=30.1
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 016240 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (392)
Q Consensus 230 aGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~ 269 (392)
++|-+|+|..|. .+..++.++.+.++|+ ++-.|.|+
T Consensus 20 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPG---AAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTT---CHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 799999998755 4788999999887776 89999884
No 64
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=49.94 E-value=17 Score=29.14 Aligned_cols=50 Identities=20% Similarity=0.139 Sum_probs=35.6
Q ss_pred CeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEE
Q 016240 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVT 311 (392)
Q Consensus 261 g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~ 311 (392)
|.+++++|+..+......+.+++.+|++||+......+.+.+.+ ...|++
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~-~~ipvl 102 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE-RGVPVI 102 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH-HTCCEE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH-CCCeEE
Confidence 57888888766654444432579999999999888888877765 334443
No 65
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=46.80 E-value=2.1e+02 Score=27.68 Aligned_cols=163 Identities=18% Similarity=0.116 Sum_probs=89.8
Q ss_pred CCeeEEEecccceEEEEcCC---cccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCc
Q 016240 194 PYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYG 270 (392)
Q Consensus 194 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~ 270 (392)
|......+.|+.-|++..|. -||. +++..++||-.+|+.=|+--+|-. ..-.+.-..+.+|+.+ +..-.|
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vGG 186 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVGG 186 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECCH
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeeccc
Confidence 55667889999999999996 3553 445668999999987554222211 1222233345566642 332223
Q ss_pred hhHHHHHH----cCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEE-ecCCCCc--EEEcCCCCHHHHHHHHHHHHHhcc
Q 016240 271 PTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-ELGGKSP--FIVCEDADVDKAAELAHYALFFNQ 343 (392)
Q Consensus 271 ~~~~~~l~----~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~l-elgG~~~--~iV~~dADl~~a~~~i~~~~~~~~ 343 (392)
...-.+|. +-|.||+|+=.|..=+...= ++... ....|-. -..|-+= +|-+++||.+..+..++--+=+..
T Consensus 187 AQAIAAlAyGTetIp~VDkI~GPGN~yVa~AK-r~Vs~-~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 187 AQAIAALAFGTESVPKVDKIFGPGNAFVTEAK-RQVSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHHH-CTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHcCCCCCCCccEEECCCcHHHHHHH-HHhHh-hcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 34334442 24789999988887654321 11110 0111211 1123333 333457999999888776554443
Q ss_pred CCcccCCcEEEEeCcchHHHHHHHHHHHh
Q 016240 344 GQCCCAGSRTFVHESVYDQFVEKANALAM 372 (392)
Q Consensus 344 GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~ 372 (392)
. .+.++|..+ +++.+++.+++.
T Consensus 265 ~-----a~aiLvT~s--~~la~~V~~ev~ 286 (434)
T 1kae_A 265 D-----SQVILLTPA--ADMARRVAEAVE 286 (434)
T ss_dssp T-----CEEEEEESC--HHHHHHHHHHHH
T ss_pred C-----CcEEEEECC--HHHHHHHHHHHH
Confidence 2 455777665 345444444444
No 66
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=46.22 E-value=26 Score=25.27 Aligned_cols=37 Identities=24% Similarity=0.469 Sum_probs=31.2
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 016240 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (392)
Q Consensus 230 aGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~ 269 (392)
.+|-+|+|..|. .+..++.++.+.+.+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG---~A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTT---THHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhcCCCCCeEEEEecC
Confidence 689999998755 4788899998877889999999984
No 67
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=45.77 E-value=31 Score=25.16 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=30.1
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 016240 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (392)
Q Consensus 230 aGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~ 269 (392)
.||-+|+|..|.. +..++.++.+.++|+ ++-.|.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999987654 788999999887776 88988884
No 68
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=38.77 E-value=27 Score=29.59 Aligned_cols=122 Identities=17% Similarity=0.067 Sum_probs=78.3
Q ss_pred eEEEeccc-ceEEEEcCC-cccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCeEEEEeC-Cchh
Q 016240 197 VQTLHEPI-GVAGQIIPW-NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPT 272 (392)
Q Consensus 197 ~~~~~~P~-GVv~~i~p~-n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~-aGlP~g~v~vv~g-~~~~ 272 (392)
.....-|. |.|+++..- .=+-...+.+-...++.|..++- |..|+ +.|.+ .|+|-..++=++. .++.
T Consensus 19 ~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pq 89 (178)
T 1vmd_A 19 RYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQ 89 (178)
T ss_dssp EEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHH
T ss_pred ceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCch
Confidence 33444454 755555543 33555555666667778998774 34444 44455 7999766654432 2445
Q ss_pred HHHHHHcCCCcCEEEeeCC-------hHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccC
Q 016240 273 AGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (392)
Q Consensus 273 ~~~~l~~~~~vd~V~ftGs-------~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~G 344 (392)
+++.+.+ ..|+.|+||-+ ..-+..|.+.|.. ..+|+...+ ..++.++.+.+++..
T Consensus 90 I~d~I~~-geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 90 IGAMIAE-GKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHT-TSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHHHHC-CCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 6666665 58999999977 2356889999987 667877543 346678888888764
No 69
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=35.16 E-value=25 Score=29.22 Aligned_cols=50 Identities=20% Similarity=0.306 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcC--CCcCEEEeeCChHHH
Q 016240 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTG 295 (392)
Q Consensus 245 t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~--~~vd~V~ftGs~~~g 295 (392)
....|..++.+.|+..-...+++.+ ..+.+.|... ...|.|..||++..+
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 5567888999999876667788776 6666665432 368999999988754
No 70
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=32.95 E-value=64 Score=26.80 Aligned_cols=52 Identities=27% Similarity=0.123 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHH---cCCCcCEEEeeCChHHH
Q 016240 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA---SHMEVDKLAFTGSTTTG 295 (392)
Q Consensus 244 ~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~---~~~~vd~V~ftGs~~~g 295 (392)
....+|++.|.+.|+.--...+|+.+...+...+. .....|.|+.||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 46678999999999876556666654344444443 34578999999998744
No 71
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=31.03 E-value=27 Score=29.81 Aligned_cols=54 Identities=26% Similarity=0.182 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcC--CCcCEEEeeCChHHHH
Q 016240 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 296 (392)
Q Consensus 243 p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~--~~vd~V~ftGs~~~g~ 296 (392)
-.....|..++.+.|+..-...+++.+...+.+.|... ...|.|..||++..+.
T Consensus 48 Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 48 DHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 34667889999999987666677776544555555432 4689999999987553
No 72
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=30.11 E-value=34 Score=28.43 Aligned_cols=52 Identities=25% Similarity=0.243 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHc---CCCcCEEEeeCChHHH
Q 016240 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTG 295 (392)
Q Consensus 244 ~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~---~~~vd~V~ftGs~~~g 295 (392)
.....|.+.|.+.|+..-...+++.+...+.+.|.. +...|.|..||++..+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 455778889999998665566666544445445433 2368999999998654
No 73
>4g6u_B EC869 CDII; beta-augmentation, DNAse, toxin, immunity; 2.35A {Escherichia coli O157}
Probab=27.38 E-value=83 Score=26.53 Aligned_cols=83 Identities=12% Similarity=0.085 Sum_probs=59.1
Q ss_pred cCceeCCEeee--CCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHHHHHHHh
Q 016240 66 TQLLINGQFVD--SASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT-AYERSKIILRFADLLER 142 (392)
Q Consensus 66 ~~~~I~G~~~~--~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~-~~~R~~~L~~~a~~l~~ 142 (392)
...+.|+++.. +-+|.-+...|| .+.+..--+..+..++-.++..|....+ .++ ++++.+++.. +.+++
T Consensus 11 a~~~~n~~f~~I~T~sg~~l~~~Dp-~~~~~~L~~dvdd~~LG~~i~~AL~~SR-----~i~~~ee~~~~f~~--~~~~~ 82 (177)
T 4g6u_B 11 ANIFVTPDFLSVETYSGLGMTGRDP-LFSPRLLQPDVDDKSLGEEILQALSDSR-----TLDVLEERVAFFDL--EKSKE 82 (177)
T ss_dssp EEEEECSSCEEEEEEEESSSEEECT-TSCCEEECTTCCHHHHHHHHHHHHHTCC-----BCCSHHHHHHHHCT--TTTHH
T ss_pred EEEEecCCEEEEEEEecCceEecCC-CCCCeeCCCCCCHHHHHHHHHHHHHhCC-----ccCCHHHHHHHhcc--hhhhH
Confidence 35677887742 234555677888 4666666778899999999988877654 567 8888888773 45556
Q ss_pred cHHHHHHHHHHhcC
Q 016240 143 HNDEIAALETWDNG 156 (392)
Q Consensus 143 ~~~~l~~~~~~e~G 156 (392)
..+++.+.+....|
T Consensus 83 ~yk~w~~~lm~~yG 96 (177)
T 4g6u_B 83 QYAAWIATLMEKYG 96 (177)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC
Confidence 66777777777777
No 74
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=23.26 E-value=41 Score=28.28 Aligned_cols=53 Identities=25% Similarity=0.106 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHc---CCCcCEEEeeCChHHH
Q 016240 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTG 295 (392)
Q Consensus 243 p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~---~~~vd~V~ftGs~~~g 295 (392)
-.....|.+.+.+.|+..-...+++.+...+.+.|.. ..+.|.|..||++..+
T Consensus 39 Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred ehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 3456778899999998655566676544445555433 2248999999988754
No 75
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=22.35 E-value=70 Score=21.74 Aligned_cols=35 Identities=14% Similarity=0.264 Sum_probs=25.9
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 016240 112 ARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (392)
Q Consensus 112 A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~ 148 (392)
++.... .|..|+.++|..+.......-+++..++.
T Consensus 30 ~k~lg~--~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 30 LKTVKE--NWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHH--HHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455 89999999999988877776666665554
No 76
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=21.83 E-value=4.8e+02 Score=24.10 Aligned_cols=128 Identities=14% Similarity=0.106 Sum_probs=75.7
Q ss_pred HhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCc--------hhHHHHHHcCCCcCEEEe---eCChHHHH
Q 016240 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYG--------PTAGAALASHMEVDKLAF---TGSTTTGK 296 (392)
Q Consensus 228 LaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~--------~~~~~~l~~~~~vd~V~f---tGs~~~g~ 296 (392)
...|+.-++- +.-..+..+...+.+.|+ |.=.+|.-.+ .+..+.+.++|+.+.|.. .|+... +
T Consensus 166 ~~~G~vgivS---qSG~l~~~i~~~~~~~g~--G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~ 239 (334)
T 3mwd_B 166 YRPGSVAYVS---RSGGMSNELNNIISRTTD--GVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-Y 239 (334)
T ss_dssp TSCCSEEEEE---SCHHHHHHHHHHHHHHSS--CEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-H
T ss_pred CCCCCEEEEe---CchHHHHHHHHHHHhcCC--CeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-H
Confidence 4568877773 333344455566666676 3444554212 245678899999998886 456655 6
Q ss_pred HHHHHhhh-CCCccEEEecCCCCcE-------------EEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHH
Q 016240 297 IVLQLAAK-SNLKPVTLELGGKSPF-------------IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362 (392)
Q Consensus 297 ~i~~~aa~-~~~~~v~lelgG~~~~-------------iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~ 362 (392)
.+++.+.+ ...|||+.--.|.+.. ++..|.. -..+..++|...| +++-++ .++
T Consensus 240 ~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~----~a~~~~aa~~~aG--------v~~v~~-~~e 306 (334)
T 3mwd_B 240 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASE----TAVAKNQALKEAG--------VFVPRS-FDE 306 (334)
T ss_dssp HHHHHHHTTSCCSCEEEEEECTTCC----------------CGGG----SHHHHHHHHHHTT--------CBCCSS-GGG
T ss_pred HHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCc----cHHHHHHHHHHcC--------CeEcCC-HHH
Confidence 66666553 2469999988888764 2222211 1125566777788 555555 356
Q ss_pred HHHHHHHHHhcC
Q 016240 363 FVEKANALAMKR 374 (392)
Q Consensus 363 f~~~L~~~~~~~ 374 (392)
+.+.+++.++++
T Consensus 307 l~~~~~~~~~~l 318 (334)
T 3mwd_B 307 LGEIIQSVYEDL 318 (334)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666654
No 77
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.90 E-value=1.9e+02 Score=26.42 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=60.0
Q ss_pred EEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeC--Cch--hHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC---
Q 016240 233 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG--YGP--TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--- 305 (392)
Q Consensus 233 ~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g--~~~--~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~--- 305 (392)
.+|++|....-.....+.+.|.+.|+. +.+... .+. .....+.. ...|.|+..|+..|-..+.+.+...
T Consensus 33 ~vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~ 108 (332)
T 2bon_A 33 LLILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGD 108 (332)
T ss_dssp EEEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSS
T ss_pred EEEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccC
Confidence 355666544323334566777777764 333322 121 11112222 2578999999999999988888731
Q ss_pred CCccE-EEecCCCCcEE-EcC-CCCHHHHHHHHHHHHH
Q 016240 306 NLKPV-TLELGGKSPFI-VCE-DADVDKAAELAHYALF 340 (392)
Q Consensus 306 ~~~~v-~lelgG~~~~i-V~~-dADl~~a~~~i~~~~~ 340 (392)
...|+ ++-+|--|-+. -.. ..|++.+++.++.+.+
T Consensus 109 ~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 109 DIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 33454 34455545222 222 4589999998887654
No 78
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=20.45 E-value=22 Score=34.23 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHc-CCCcCEEEeeCChHHHH
Q 016240 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS-HMEVDKLAFTGSTTTGK 296 (392)
Q Consensus 245 t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~-~~~vd~V~ftGs~~~g~ 296 (392)
....|..++.+.|...-.+.+++.+...+.+.|.. ....|.|..||++..|.
T Consensus 212 n~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 212 NSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 45678888999887655556666533333333321 11479999999998774
Done!