BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016247
(392 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 39/332 (11%)
Query: 57 LHHYMTDLAAKHGTYRLLGPF-RSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLG 115
L D A K+G + F ++ V + P +V+ L + Y K S Y L+ + G
Sbjct: 12 LQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFG 69
Query: 116 DGIF------TVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDK 169
+ +F + E+W +QR++ FS L F + A +L ++L A+
Sbjct: 70 ERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMET-FNEKAEQLVEILEAKADGQT 128
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNE---EGTRFSSAFDDASAMTLWRYVDIF 226
+ +QD+ + +D + K AFG+E + G+ + + + AS TL +++
Sbjct: 129 PVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLP-- 186
Query: 227 WKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV- 285
K K+L + ++ I + ++++ + + +E DIL++ L+
Sbjct: 187 GKRKQLREV------RESIRFLRQVGRDWVQRRREALKRGEE-----VPADILTQILKAE 235
Query: 286 ---TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISD 342
D + L D + F IAG +T+A L++ + L + P + ++ EV E G+K D
Sbjct: 236 EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLD 295
Query: 343 FLKVAGCISEEALEKMHYLHAAITETLRLYPA 374
F E L ++ YL + E+LRLYP
Sbjct: 296 F---------EDLGRLQYLSQVLKESLRLYPP 318
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 117 GIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDL 176
I + E+W+ R + S F++ L++ + L + L A + K + ++D+
Sbjct: 97 AISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTLKDV 155
Query: 177 FMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIG 236
F ++D I +FGV +DS+ + ++ + + ++D F+ L+I
Sbjct: 156 FGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----LSIT 204
Query: 237 SEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL------QV 285
L +EV++ V+ +RK +M + + E T + D L + +
Sbjct: 205 VFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKET 264
Query: 286 TDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+ K
Sbjct: 265 ESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAP 324
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+ + + +M YL + ETLRL+P
Sbjct: 325 PTY---------DTVLQMEYLDMVVNETLRLFP 348
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 117 GIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDL 176
I + E+W+ R + S F++ L++ + L + L A + K + ++D+
Sbjct: 96 AISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTLKDV 154
Query: 177 FMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIG 236
F ++D I +FGV +DS+ + ++ + + ++D F+ L+I
Sbjct: 155 FGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----LSIT 203
Query: 237 SEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL------QV 285
L +EV++ V+ +RK +M + + E T + D L + +
Sbjct: 204 VFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKET 263
Query: 286 TDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+ K
Sbjct: 264 ESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAP 323
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+ + + +M YL + ETLRL+P
Sbjct: 324 PTY---------DTVLQMEYLDMVVNETLRLFP 347
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 117 GIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDL 176
I + E+W+ R + S F++ L++ + L + L A + K + ++D+
Sbjct: 95 AISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTLKDV 153
Query: 177 FMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIG 236
F ++D I +FGV +DS+ + ++ + + ++D F+ L+I
Sbjct: 154 FGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----LSIT 202
Query: 237 SEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL------QV 285
L +EV++ V+ +RK +M + + E T + D L + +
Sbjct: 203 VFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKET 262
Query: 286 TDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+ K
Sbjct: 263 ESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAP 322
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+ + + +M YL + ETLRL+P
Sbjct: 323 PTY---------DTVLQMEYLDMVVNETLRLFP 346
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 57/284 (20%)
Query: 111 KDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSD 168
+D GDG+FT + W++ I FS + ++ + A A +L Q E N+D
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNAD 136
Query: 169 KILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVDI 225
+ +++ + + TLD+I +CG N RF+S + D +++ R +D
Sbjct: 137 EYIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFIISMIRALDE 183
Query: 226 FWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKED 277
+ N A + ++ I+V++ V KII RK + + D D
Sbjct: 184 VMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD-----------D 232
Query: 278 ILSRFLQVTDPKYLRDI--------ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQ 329
+L++ L DP+ + I+ F+IAG +TT+ LS+ +Y L K+P V +K+ +
Sbjct: 233 LLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAE 292
Query: 330 EVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
E V S + ++++ Y+ + E LRL+P
Sbjct: 293 EATRVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 329
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 84 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 141
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 142 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 188
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 189 EAMNKLQRTNPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 237
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 238 DLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAA 297
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 298 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 332
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 329
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 329
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 148/346 (42%), Gaps = 61/346 (17%)
Query: 51 LLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVY-SSDPANVEYMLKTNFDNYGKGSYNYS 108
LLN ++ + +A + G ++ P R Y SS E ++ FD S
Sbjct: 20 LLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDK--NLSQALK 77
Query: 109 ILKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAAN 166
++D GDG+ T + W++ I FS + ++ + A A +L Q E N
Sbjct: 78 FVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLN 135
Query: 167 SDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYV 223
+D+ +++ + + TLD+I +CG N RF+S + D ++ R +
Sbjct: 136 ADEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRAL 182
Query: 224 DIFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKK 275
D + N A + ++ I+V++ V KII RK + + D
Sbjct: 183 DEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------- 232
Query: 276 EDILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKI 327
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 233 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA 291
Query: 328 VQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 AEEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 148/346 (42%), Gaps = 61/346 (17%)
Query: 51 LLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVY-SSDPANVEYMLKTNFDNYGKGSYNYS 108
LLN ++ + +A + G ++ P R Y SS E ++ FD S
Sbjct: 19 LLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDK--NLSQALK 76
Query: 109 ILKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAAN 166
++D GDG+ T + W++ I FS + ++ + A A +L Q E N
Sbjct: 77 FVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLN 134
Query: 167 SDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYV 223
+D+ +++ + + TLD+I +CG N RF+S + D ++ R +
Sbjct: 135 ADEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRAL 181
Query: 224 DIFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKK 275
D + N A + ++ I+V++ V KII RK + + D
Sbjct: 182 DEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------- 231
Query: 276 EDILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKI 327
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA 290
Query: 328 VQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 291 AEEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 148/346 (42%), Gaps = 61/346 (17%)
Query: 51 LLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVY-SSDPANVEYMLKTNFDNYGKGSYNYS 108
LLN ++ + +A + G ++ P R Y SS E ++ FD S
Sbjct: 19 LLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDK--NLSQALK 76
Query: 109 ILKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAAN 166
++D GDG+ T + W++ I FS + ++ + A A +L Q E N
Sbjct: 77 FVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLN 134
Query: 167 SDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYV 223
+D+ +++ + + TLD+I +CG N RF+S + D ++ R +
Sbjct: 135 ADEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRAL 181
Query: 224 DIFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKK 275
D + N A + ++ I+V++ V KII RK + + D
Sbjct: 182 DEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------- 231
Query: 276 EDILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKI 327
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA 290
Query: 328 VQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 291 AEEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++DL GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 293 EEAARVL----------VDPVPSHKQVKQLKYVGMVLNEALRLWP 327
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ +IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ R I S + ++ + A A +L Q E NS
Sbjct: 79 VRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYH-AMMVDIAVQLVQKW-ERLNS 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N R +S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRINSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ L++ +Y L K+P V +K
Sbjct: 233 DLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LR++P
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRIWP 327
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W + I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I + G N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLSGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 57/285 (20%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+E V S + ++++ Y+ + E LRL+P
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 28/261 (10%)
Query: 118 IFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF 177
IF + E W+ R S L + L +L E N +D+ L
Sbjct: 133 IFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRL-EEVTNESGYVDVLTLL 191
Query: 178 MKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNI-- 235
+ LD+ + + LD + + FD A+ + DIF+KI L
Sbjct: 192 RRVMLDTSNTLFLRIPLDE----SAIVVKIQGYFDAWQALLI--KPDIFFKISWLYKKYE 245
Query: 236 GSEARLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRD 293
S LK IEV+ + I +K ++ DF E +K L+R + +
Sbjct: 246 KSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTR-------ENVNQ 298
Query: 294 IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEE 353
IL +IA DT + +L + ++++ KHP V+E I++E++ G +DI +
Sbjct: 299 CILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKI----------D 348
Query: 354 ALEKMHYLHAAITETLRLYPA 374
++K+ + I E++R P
Sbjct: 349 DIQKLKVMENFIYESMRYQPV 369
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 143/362 (39%), Gaps = 60/362 (16%)
Query: 33 SGNKQKKYHPIGGTVFNQLLNFNRLHH----YMTDLAAKHGTYRL-LGPFRSEVYSSDPA 87
G + + P+ G L + RL +M+ L R+ LGP VY+
Sbjct: 16 PGAPELREPPVAGGGVPLLGHGWRLARDPLAFMSQLRDHGDVVRIKLGP--KTVYAVTNP 73
Query: 88 NVEYMLKTNFDNYGKGSYNYSILKDLLG-DGIFTVDGEKWREQRKISSHEFSTKVLRDFS 146
+ L N D + G + L+ LLG +G+ T +G R QR+ F +
Sbjct: 74 ELTGALALNPDYHIAGPL-WESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAI---- 128
Query: 147 SAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGS---NEE 203
A+ + A L+E K +D +T +S F+VA V + +E
Sbjct: 129 -PAYGPIMEEEAHALTERWQPGKTVD-------ATSES-FRVAVRVAARCLLRGQYMDER 179
Query: 204 GTRFSSAFDDASAMTLWR--YVDIFWKIKKL--LNIGSEARLKQRIEVIDTFVYKIIRKK 259
R A T++R Y + + L L + + R + + V +II ++
Sbjct: 180 AERLCVAL-----ATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAER 234
Query: 260 TDQMHDFQEEYTSMKKEDILSRFLQV----TDP---KYLRDIILNFVIAGKDTTAATLSW 312
+ K +D+L+ L+ DP + + D ++ + G +T A+T+ W
Sbjct: 235 ---------RASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMW 285
Query: 313 FIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLY 372
+ L HP ++I EV+ TG + ++ F E + K+ + I E +RL
Sbjct: 286 LLQALADHPEHADRIRDEVEAVTGGRPVA-F---------EDVRKLRHTGNVIVEAMRLR 335
Query: 373 PA 374
PA
Sbjct: 336 PA 337
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 240 RLKQRIEVIDTFVYKIIRKKTDQMHDFQ---------EEYTSMKKEDILSRFLQVTDPKY 290
RLKQ IE D V K +R+ + M Q + + E+ + L+ +
Sbjct: 224 RLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLE----GH 279
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC- 349
+ +++ I G +TTA+TLSW + L HP +Q ++ +E+ G A C
Sbjct: 280 VHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPG--------ASCS 331
Query: 350 -ISEEALEKMHYLHAAITETLRLYPA 374
++ + ++ L+A I E LRL P
Sbjct: 332 RVTYKDRARLPLLNATIAEVLRLRPV 357
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 35/271 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRL 371
+ + A KM Y A I E RL
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRL 340
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 35/271 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRL 371
+ + A KM Y A I E RL
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRL 340
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 35/271 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRL 371
+ + A KM Y A I E RL
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRL 340
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 35/271 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRL 371
+ + A KM Y A I E RL
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRL 340
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 35/271 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRL 371
+ + A KM Y A I E RL
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRL 340
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 23/266 (8%)
Query: 117 GIFTVDGEKWREQR-KISSHEFSTKVLRDFSS---AAFRKNAAKLAQLLSEAANSDKILD 172
G+F ++G +WR R +++ S K ++ F A R + L + + + A LD
Sbjct: 102 GVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLD 161
Query: 173 IQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKL 232
+Q T+++ FG L V S S F A + V + + + L
Sbjct: 162 VQPSIFHYTIEASNLALFGERLGLVGHSPSSA---SLNFLHALEVMFKSTVQLMFMPRSL 218
Query: 233 LNIGSEARLKQRIEVIDT-FVY--KIIRKKTDQM-HDFQEEYTSMKKEDILSRFLQVTDP 288
S K+ E D F Y I+K ++ + + YT + E +L L +
Sbjct: 219 SRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLLKAELSL--- 275
Query: 289 KYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAG 348
+ ++ + DTTA L ++ L ++P VQ+ + QE A A IS+
Sbjct: 276 EAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAA--AASISEH----- 328
Query: 349 CISEEALEKMHYLHAAITETLRLYPA 374
++A ++ L AA+ ETLRLYP
Sbjct: 329 --PQKATTELPLLRAALKETLRLYPV 352
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 350
L+D IL + AG +T + LS F +L +H ++E++ QE + L+++ +
Sbjct: 244 LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNK----------LQLSQEL 293
Query: 351 SEEALEKMHYLHAAITETLRLYPA 374
+ E L+KM YL + E LRL P
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPP 317
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 289 KYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAG 348
K L + +A +TTA +L W +Y L ++P Q +++QEV+
Sbjct: 282 KELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP------- 334
Query: 349 CISEEALEKMHYLHAAITETLRLYPA 374
E L M YL A + E++RL P+
Sbjct: 335 --RAEDLRNMPYLKACLKESMRLTPS 358
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 35/271 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +G +W+ R+ FS +RDF + + + AQ L E K +
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
+D LF T + I + FG ++E + + F ++ + +F
Sbjct: 146 MDPTFLFQSITANIICSIVFGKRFHY---QDQEFLKMLNLFYQTFSLISSVFGQLFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEYT-SMKKE--DILS 280
L G+ ++ + ++ I+ ++ + K + + D + Y M+KE + S
Sbjct: 203 GFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L L+ AG +TT+ TL + ++ K+P V E++ +E+++ G
Sbjct: 263 EFSH----QNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP 318
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRL 371
+ A KM Y A I E R
Sbjct: 319 PELHDRA---------KMPYTEAVIYEIQRF 340
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 125/320 (39%), Gaps = 56/320 (17%)
Query: 81 VYSSDPANVEYMLKTNFDNYGK------GSYNYSILKDLLGDGIFTVDGEKWREQRKISS 134
VY DP +V + K+ N + +Y+ + + G+ W++ R +
Sbjct: 59 VYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPI---GVLLKKSAAWKKDRVALN 115
Query: 135 HEF----STKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAF 190
E +TK A R + L + + +A + + DI D + +SI V F
Sbjct: 116 QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIF 175
Query: 191 GVE---LDSVCGSNEEGTRFSSAFDD---ASAMTLWRYVDIF-------WKIKKLLNIGS 237
G L+ V N E RF A S L D+F WK ++ +
Sbjct: 176 GERQGMLEEVV--NPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD----HVAA 229
Query: 238 EARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY--LRDII 295
+ + ++ Y +R+K HD++ IL R L + + ++ +
Sbjct: 230 WDVIFSKADIYTQNFYWELRQKGSVHHDYR---------GILYRLLGDSKMSFEDIKANV 280
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEE 353
+ G DTT+ TL W +Y + ++ VQ+ + EV A D++ L++
Sbjct: 281 TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL---- 336
Query: 354 ALEKMHYLHAAITETLRLYP 373
L A+I ETLRL+P
Sbjct: 337 -------LKASIKETLRLHP 349
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 125/320 (39%), Gaps = 56/320 (17%)
Query: 81 VYSSDPANVEYMLKTNFDNYGK------GSYNYSILKDLLGDGIFTVDGEKWREQRKISS 134
VY DP +V + K+ N + +Y+ + + G+ W++ R +
Sbjct: 56 VYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPI---GVLLKKSAAWKKDRVALN 112
Query: 135 HEF----STKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAF 190
E +TK A R + L + + +A + + DI D + +SI V F
Sbjct: 113 QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIF 172
Query: 191 GVE---LDSVCGSNEEGTRFSSAFDD---ASAMTLWRYVDIF-------WKIKKLLNIGS 237
G L+ V N E RF A S L D+F WK ++ +
Sbjct: 173 GERQGMLEEVV--NPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD----HVAA 226
Query: 238 EARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY--LRDII 295
+ + ++ Y +R+K HD++ IL R L + + ++ +
Sbjct: 227 WDVIFSKADIYTQNFYWELRQKGSVHHDYR---------GILYRLLGDSKMSFEDIKANV 277
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEE 353
+ G DTT+ TL W +Y + ++ VQ+ + EV A D++ L++
Sbjct: 278 TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL---- 333
Query: 354 ALEKMHYLHAAITETLRLYP 373
L A+I ETLRL+P
Sbjct: 334 -------LKASIKETLRLHP 346
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 64/244 (26%)
Query: 157 LAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGS-NEEGTRFSSAFDDAS 215
L + + + + + DI++ +SI V FG L + + N E +F A
Sbjct: 144 LHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAV---- 199
Query: 216 AMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKT--------DQMHDFQ 267
+F LLN+ E +Y++ R KT D + +
Sbjct: 200 -------YKMFHTSVPLLNVPPE-------------LYRLFRTKTWRDHVAAWDTIFNKA 239
Query: 268 EEYTSMKKEDILSR-----------FLQVTDPKYLRDI---ILNFVIAGKDTTAATLSWF 313
E+YT + +D+ + L ++ L D+ I + G +TT+ TL W
Sbjct: 240 EKYTEIFYQDLRRKTEFRNYPGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWH 299
Query: 314 IYMLCKHPAVQEKIVQEV----KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETL 369
+Y + + VQE + +EV ++A G DIS L++ L A+I ETL
Sbjct: 300 LYEMARSLNVQEMLREEVLNARRQAEG--DISKMLQMVPL-----------LKASIKETL 346
Query: 370 RLYP 373
RL+P
Sbjct: 347 RLHP 350
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 227 WKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVT 286
W + L + S R + I YK I+K+ QE K +DIL L T
Sbjct: 191 WLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS----QE-----KIDDILQTLLDAT 241
Query: 287 --DPKYLRD-----IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKD 339
D + L D +++ ++AG+ T++ T +W + L + +Q+K E K G
Sbjct: 242 YKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN- 300
Query: 340 ISDFLKVAGCISEEALEKMHYLHAAITETLRLYPA 374
++ + L+ ++ L I ETLRL P
Sbjct: 301 -------LPPLTYDQLKDLNLLDRCIKETLRLRPP 328
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATG 336
LR ++ + AG TT+ TL+W + ++ HP VQ ++ QE+ + G
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIG 318
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATG 336
LR ++ + AG TT+ TL+W + ++ HP VQ ++ QE+ + G
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIG 318
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 15/153 (9%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+S AL ++ L + ETLRL+P
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHP 319
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 15/153 (9%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+S AL ++ L + ETLRL+P
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHP 319
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 85 DPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRD 144
DP VE L + K ++ Y L L G G+ T GE W+E RK F K +R
Sbjct: 48 DPEGVEGALLA--EGTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRG 105
Query: 145 FSSA 148
+ A
Sbjct: 106 YREA 109
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 15/153 (9%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+S AL ++ L + ETLRL+P
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHP 319
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 15/153 (9%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYP 373
+S AL ++ L + ETLRL+P
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHP 319
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 112/270 (41%), Gaps = 35/270 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDKILD 172
G GI +G+KW+E R+ FS LR+F + + A+ L E K
Sbjct: 90 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASP 144
Query: 173 IQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
F+ + + I + F D +++ ++ + ++ ++
Sbjct: 145 CDPTFILGCAPCNVICSIIFHKRFDY---KDQQFLNLMEKLNENIEILSSPWIQVYNNFP 201
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY-TSMKKE--DILS 280
LL+ G+ +L + + + +++ + +++ + M DF + + M+KE + S
Sbjct: 202 ALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS 261
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L + ++ AG +TT+ TL + + +L KHP V K+ +E++ G
Sbjct: 262 EFTI----ESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR- 316
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLR 370
+ C+ + + M Y A + E R
Sbjct: 317 ------SPCMQDRS--HMPYTDAVVHEVQR 338
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 283 LQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATG 336
+Q++D K + +I+L+ AG DT +SW + L +P VQ KI +E+ G
Sbjct: 273 VQLSDEKII-NIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIG 325
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 29/123 (23%)
Query: 248 IDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTA 307
ID F+ K+ ++K +Q +F E + D+L AG +TT+
Sbjct: 247 IDCFLIKMEKEKQNQQSEFTIENLVITAADLLG--------------------AGTETTS 286
Query: 308 ATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITE 367
TL + + +L KHP V K+ +E++ G + C+ + M Y A + E
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVVGRNR-------SPCMQDRG--HMPYTDAVVHE 337
Query: 368 TLR 370
R
Sbjct: 338 VQR 340
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 295 ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEA 354
+ + AG +TT+ TL + + +L K+P ++EK+ +E+ G I + +
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP---------AIKD 322
Query: 355 LEKMHYLHAAITETLRL 371
++M Y+ A + E R
Sbjct: 323 RQEMPYMDAVVHEIQRF 339
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 111/270 (41%), Gaps = 35/270 (12%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDKILD 172
G GI +G+KW+E R+ FS LR+F + + A+ L E K
Sbjct: 92 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASP 146
Query: 173 IQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
F+ + + I + F D +++ ++ + ++ I
Sbjct: 147 CDPTFILGCAPCNVICSIIFHKRFDY---KDQQFLNLMEKLNENIKILSSPWIQICNNFS 203
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY-TSMKKE--DILS 280
+++ G+ +L + + + +++ + +++ + M DF + + M+KE + S
Sbjct: 204 PIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS 263
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L + ++ AG +TT+ TL + + +L KHP V K+ +E++ G
Sbjct: 264 EFTI----ESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR- 318
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLR 370
+ C+ + + M Y A + E R
Sbjct: 319 ------SPCMQDRS--HMPYTDAVVHEVQR 340
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 360
AG +TT + + W + L +P V++K+ +E+ + G IS+ ++
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG-------FSRTPTISDR--NRLLL 334
Query: 361 LHAAITETLRLYPA 374
L A I E LRL P
Sbjct: 335 LEATIREVLRLRPV 348
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 23/173 (13%)
Query: 207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK-----KTD 261
FS + A++ +++ Y W +L G +L + V+ F+ ++I K K
Sbjct: 188 FSENVELAASASVFLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 262 QMHDFQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLC 318
F + Y K D S F + + L + +IAG +TT L W I +
Sbjct: 246 LPQHFVDAYLDEMDQGKNDPSSTFSK----ENLIFSVGELIIAGTETTTNVLRWAILFMA 301
Query: 319 KHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRL 371
+P +Q ++ +E+ G G S + KM Y A + E LR
Sbjct: 302 LYPNIQGQVQKEIDLIMGPN---------GKPSWDDKCKMPYTEAVLHEVLRF 345
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 299 VIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKM 358
+IAG +TT L W I + +P +Q ++ +E+ G G S + KM
Sbjct: 282 IIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN---------GKPSWDDKCKM 332
Query: 359 HYLHAAITETLRL 371
Y A + E LR
Sbjct: 333 PYTEAVLHEVLRF 345
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 103/254 (40%), Gaps = 29/254 (11%)
Query: 97 FDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNA 154
F G + I K L GI + +G++W+E R+ FS LR+F +
Sbjct: 76 FSGRGNSPISQRITKGL---GIISSNGKRWKEIRR-----FSLTTLRNFGMGKRSIEDRV 127
Query: 155 AKLAQLLSEAANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFD 212
+ A L E K F+ + + I V F D ++ F+
Sbjct: 128 QEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDY---KDQNFLTLMKRFN 184
Query: 213 DASAMTLWRYVDIFWKIKKLLNI--GSEARLKQRIEVIDTFVYKIIRKK-----TDQMHD 265
+ + ++ + L++ G+ ++ + + + +++ + +++ + D
Sbjct: 185 ENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRD 244
Query: 266 FQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPA 322
F + + +K++ S F + + L + + +AG +TT+ TL + + +L KHP
Sbjct: 245 FIDCFLIKMEQEKDNQKSEF----NIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPE 300
Query: 323 VQEKIVQEVKEATG 336
V K+ +E+ G
Sbjct: 301 VTAKVQEEIDHVIG 314
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 54/288 (18%), Positives = 102/288 (35%), Gaps = 75/288 (26%)
Query: 124 EKWREQRKISSHEFSTKVLRDFSSAAFRKN----------AAKLAQLLSEAANSDKILDI 173
E W+ QR+ ++H ++R+F + R A +L LL + LD
Sbjct: 99 EHWKVQRR-AAHS----MMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDP 153
Query: 174 QDLFMKSTLDSIFKVAFGV-------ELDSVCGSNEEGTRFSSAFDDASAMTLWRY---- 222
+ L + + + + V FG E + NEE R A M +Y
Sbjct: 154 RPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNP 213
Query: 223 -------------------VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM 263
+D F + + L G+ R +++D F+ +K
Sbjct: 214 VRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR-----DMMDAFILSAEKKAAGDS 268
Query: 264 HDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAV 323
H + E++ P + DI A +DT + L W + + ++P V
Sbjct: 269 HG---GGARLDLENV---------PATITDIF----GASQDTLSTALQWLLLLFTRYPDV 312
Query: 324 QEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRL 371
Q ++ E+ + G + C+ ++ + Y+ A + E +R
Sbjct: 313 QTRVQAELDQVVGRDRLP-------CMGDQ--PNLPYVLAFLYEAMRF 351
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 360
AG +TT+ TL + + +L KHP V ++ +E++ G + C+ + + +M Y
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHR-------SPCMQDRS--RMPY 326
Query: 361 LHAAITETLRL 371
A I E R
Sbjct: 327 TDAVIHEIQRF 337
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 15/73 (20%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAK---DISDFLKVAGCISEEALEK 357
AG DT +SW + L P +Q KI +E+ G + +SD +
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD------------RPQ 340
Query: 358 MHYLHAAITETLR 370
+ YL A I ET R
Sbjct: 341 LPYLEAFILETFR 353
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/293 (17%), Positives = 121/293 (41%), Gaps = 60/293 (20%)
Query: 54 FNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNY----GKGSY--NY 107
FN +H LA ++G + P S V P E L T +++ G G +
Sbjct: 31 FNDVHGLT--LAGRYGELQETEPV-SRVRP--PYGEEAWLVTRYEDVRAVLGDGRFVRGP 85
Query: 108 SILKD-------LLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLA-Q 159
S+ +D ++ G+ ++D + R++ F+ + + + R A ++A +
Sbjct: 86 SMTRDEPRTRPEMVKGGLLSMDPPEHSRLRRLVVKAFTAR-----RAESLRPRAREIAHE 140
Query: 160 LLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTL 219
L+ + A + + D+ +F + + GV ++ TR+S AF + +T
Sbjct: 141 LVDQMAATGQPADLVAMFARQLPVRVICELLGVP----SADHDRFTRWSGAFLSTAEVTA 196
Query: 220 WRYVDI----FWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKK 275
+ + + L++ ++R E D V +++ + Q S+ +
Sbjct: 197 EEMQEAAEQAYAYMGDLID-------RRRKEPTDDLVSALVQARDQQ--------DSLSE 241
Query: 276 EDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
+++L D+ + ++AG ++T ++ F+Y+L P ++ +++
Sbjct: 242 QELL-------------DLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL 281
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/223 (15%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 111 KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLA-QLLSEAANSDK 169
+++ G+ ++D + R++ F+ + + + R A ++A +L+ + A + +
Sbjct: 96 PEMVKGGLLSMDPPEHSRLRRLVVKAFTAR-----RAESLRPRAREIAHELVDQMAATGQ 150
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDI---- 225
D+ +F + + GV ++ TR+S AF + +T +
Sbjct: 151 PADLVAMFARQLPVRVICELLGVP----SADHDRFTRWSGAFLSTAEVTAEEMQEAAEQA 206
Query: 226 FWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV 285
+ + L++ ++R E D V +++ + Q S+ ++++L
Sbjct: 207 YAYMGDLID-------RRRKEPTDDLVSALVQARDQQ--------DSLSEQELL------ 245
Query: 286 TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+ + ++AG ++T ++ F+Y+L P ++ +++
Sbjct: 246 -------DLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL 281
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 263 MHDFQEEYTSMKKEDILSRFLQVTD------PKYLRDIILNFVIAGKDTTAATLSWFIYM 316
M D + +D++S +Q D + L D+ + ++AG ++T ++ F+Y+
Sbjct: 210 MGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYL 269
Query: 317 LCKHPAVQEKIV 328
L P ++ +++
Sbjct: 270 LMTRPELRRQLL 281
>pdb|3OPB|A Chain A, Crystal Structure Of She4p
pdb|3OPB|B Chain B, Crystal Structure Of She4p
Length = 778
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 42 PIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYG 101
P +F ++L+ + +H ++ + K T LL + ++ + +V Y+L
Sbjct: 103 PFALNLF-EILSRSSIHVFVGCFSNKDATIALLNELQIRIHYGEDTHVTYLLSIILQLLN 161
Query: 102 KGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAA 149
K YN+ ++ L+ + I + ++ + I E + +DF A
Sbjct: 162 KFKYNFKEVRFLVKELILRISEDEVKSMMLIIFAELQSSFQKDFDKAV 209
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 304 DTTAATLSWFIYMLCKHPAVQEKIVQEVK---EATGAKDISDFLKVAG---CISEEALEK 357
+T AT W ++ + ++P + +EVK E G K + + G C+S+ L
Sbjct: 272 NTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQK-----VSLEGNPICLSQAELND 325
Query: 358 MHYLHAAITETLRLYPA 374
+ L + I E+LRL A
Sbjct: 326 LPVLDSIIKESLRLSSA 342
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 304 DTTAATLSWFIYMLCKHPAVQEKIVQEVK---EATGAKDISDFLKVAG---CISEEALEK 357
+T AT W ++ + ++P + +EVK E G K + + G C+S+ L
Sbjct: 272 NTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQK-----VSLEGNPICLSQAELND 325
Query: 358 MHYLHAAITETLRLYPA 374
+ L + I E+LRL A
Sbjct: 326 LPVLDSIIKESLRLSSA 342
>pdb|3QQY|A Chain A, Crystal Structure Of A Novel Laglidadg Homing
Endonuclease, I-Onui (From Ophiostoma Novo-Ulmi Subsp.
Americana)
Length = 307
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 289 KYLRDIILNFVIAG--KDTTAATLSWFIYMLCKHPAVQEKIVQEVKEAT--GAK--DISD 342
K L + ++ ++ G K+ + SW +++ K + +KI+ +E T G K D D
Sbjct: 213 KNLMNSLITYLGCGYIKEKNKSEFSWLDFVVTKFSDINDKIIPVFQENTLIGVKLEDFED 272
Query: 343 FLKVAGCISEEALEKMHYLHAAITETLRL 371
+ KVA I EK H + + E ++
Sbjct: 273 WCKVAKLIE----EKKHLTESGLDEIKKI 297
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,507,487
Number of Sequences: 62578
Number of extensions: 417657
Number of successful extensions: 1102
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 953
Number of HSP's gapped (non-prelim): 104
length of query: 392
length of database: 14,973,337
effective HSP length: 101
effective length of query: 291
effective length of database: 8,652,959
effective search space: 2518011069
effective search space used: 2518011069
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)