Query 016256
Match_columns 392
No_of_seqs 165 out of 213
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 10:33:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1e2t_A NAT, N-hydroxyarylamine 95.4 0.049 1.7E-06 51.7 8.8 60 168-227 68-131 (284)
2 1w4t_A Arylamine N-acetyltrans 95.3 0.045 1.5E-06 52.5 8.2 60 168-227 89-154 (299)
3 2bsz_A Arylamine N-acetyltrans 95.1 0.053 1.8E-06 51.4 8.1 60 168-227 69-133 (278)
4 1w5r_A Arylamine N-acetyltrans 94.5 0.068 2.3E-06 50.6 7.0 60 168-227 69-136 (278)
5 2vfb_A Arylamine N-acetyltrans 94.4 0.082 2.8E-06 50.1 7.3 60 168-227 66-133 (280)
6 3lnb_A N-acetyltransferase fam 93.7 0.12 4.1E-06 50.2 7.0 60 168-227 95-159 (309)
7 3d9w_A Putative acetyltransfer 93.7 0.12 4E-06 49.5 6.8 57 168-225 78-140 (293)
8 2ija_A Arylamine N-acetyltrans 92.9 0.19 6.4E-06 47.8 6.9 61 168-228 69-134 (295)
9 3kd4_A Putative protease; stru 58.7 17 0.00057 36.8 6.7 51 173-223 290-344 (506)
10 3vot_A L-amino acid ligase, BL 52.1 80 0.0027 30.0 9.9 26 175-200 18-43 (425)
11 4eg0_A D-alanine--D-alanine li 45.2 38 0.0013 31.0 6.2 94 175-283 35-128 (317)
12 3i12_A D-alanine-D-alanine lig 32.4 39 0.0013 32.0 4.3 47 236-283 115-161 (364)
13 1iow_A DD-ligase, DDLB, D-ALA\ 28.2 1.4E+02 0.0047 26.4 6.9 94 175-283 24-117 (306)
14 3ouz_A Biotin carboxylase; str 24.1 41 0.0014 32.4 2.8 46 235-281 93-138 (446)
15 2csp_A RIM-BP2, RIM binding pr 21.9 38 0.0013 29.6 1.9 30 357-387 33-62 (130)
No 1
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Probab=95.41 E-value=0.049 Score=51.70 Aligned_cols=60 Identities=17% Similarity=0.277 Sum_probs=48.9
Q ss_pred cchhhh--HHHHHHHHHhcCCceEEEee--cCCCCCCCCCcccceEEEEEcCeeEEEecCcccc
Q 016256 168 RKDDVC--RKIVTDGLLALGYDASICKS--RWDKTPSYPTGEYEYIDVVIQGERLIVDIDFRSE 227 (392)
Q Consensus 168 ~~~~~~--rr~v~~~LR~~GydAaiCkS--rW~~S~~~paG~hEYIDVv~~~~R~IVD~dFR~q 227 (392)
+.+.|+ ...+...|+++||++..+.. .|...+..++..|--+-|.+.+.+||||+.|=+.
T Consensus 68 RGGyC~ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~~~~~~~H~~l~V~idg~~ylvDVGFG~~ 131 (284)
T 1e2t_A 68 RGGYCFELNGLFERALRDIGFNVRSLLGRVILSHPASLPPRTHRLLLVDVEDEQWIADVGFGGQ 131 (284)
T ss_dssp CCBCHHHHHHHHHHHHHHTTCCEEEEEEEECTTCCSSCCCSCEEEEEEEETTEEEEECSCSCTT
T ss_pred CcEEhHHHHHHHHHHHHHCCCeEEEEEEEEecCCCCCCCCCccEEEEEEECCceEEEecCCCcc
Confidence 345563 67788899999999999876 4665555667889999999999999999999763
No 2
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=95.31 E-value=0.045 Score=52.55 Aligned_cols=60 Identities=22% Similarity=0.380 Sum_probs=49.1
Q ss_pred cchhhh--HHHHHHHHHhcCCceEEEee--cCCCCCCC--CCcccceEEEEEcCeeEEEecCcccc
Q 016256 168 RKDDVC--RKIVTDGLLALGYDASICKS--RWDKTPSY--PTGEYEYIDVVIQGERLIVDIDFRSE 227 (392)
Q Consensus 168 ~~~~~~--rr~v~~~LR~~GydAaiCkS--rW~~S~~~--paG~hEYIDVv~~~~R~IVD~dFR~q 227 (392)
|.+.|+ ...+...|+++||++..+.. .|...+.. ++..|-.+-|.+.+.+||||+.|=+.
T Consensus 89 RGGyC~ElN~Lf~~~L~~LGF~V~~l~arV~~~~~~~~~~~~~~H~~l~V~idg~~ylvDVGFG~~ 154 (299)
T 1w4t_A 89 RGGYCFELNSLFARLLLALGYELELLVARVRWGLPDDAPLTQQSHLMLRLYLAEGEFLVDVGFGSA 154 (299)
T ss_dssp CCBCHHHHHHHHHHHHHHTTCEEEEEEEEECTTCCTTSCCCCEEEEEEEEEETTEEEEECSCSGGG
T ss_pred CCcchHhHHHHHHHHHHHcCCeEEEEEEEEEeCCCCcCCCCCCccEEEEEEECCceEEEeCCCCCc
Confidence 445563 67888899999999999876 46665555 67889999999999999999999774
No 3
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5
Probab=95.15 E-value=0.053 Score=51.39 Aligned_cols=60 Identities=20% Similarity=0.362 Sum_probs=48.6
Q ss_pred cchhhh--HHHHHHHHHhcCCceEEEeec--CCCCCCC-CCcccceEEEEEcCeeEEEecCcccc
Q 016256 168 RKDDVC--RKIVTDGLLALGYDASICKSR--WDKTPSY-PTGEYEYIDVVIQGERLIVDIDFRSE 227 (392)
Q Consensus 168 ~~~~~~--rr~v~~~LR~~GydAaiCkSr--W~~S~~~-paG~hEYIDVv~~~~R~IVD~dFR~q 227 (392)
+.+.|+ ...+...|+++||++..+..+ |...+.. ++..|-.+-|.+.+.+||||+.|=+.
T Consensus 69 RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~H~~l~V~idg~~ylvDVGFG~~ 133 (278)
T 2bsz_A 69 RGGYCFEHNLLFMHALKALGFEVGGLAARVLWGQSEDAITARSHMLLRVELDGRTYIADVGFGGL 133 (278)
T ss_dssp CCBCHHHHHHHHHHHHHHHTCEEEEEEEEECSSCCSSSSCCCCEEEEEEEETTEEEEECSCCSSS
T ss_pred CCeehHHHHHHHHHHHHHCCCeEEEEEEEEeeCCCCCCCCCCccEEEEEEECCceEEEeCCCCcc
Confidence 445563 677888999999999998764 6555555 46889999999999999999999774
No 4
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=94.49 E-value=0.068 Score=50.58 Aligned_cols=60 Identities=18% Similarity=0.362 Sum_probs=48.9
Q ss_pred cchhhh--HHHHHHHHHhcCCceEEEee--cCCCCCCC--CCcccceEEEEEcCee--EEEecCcccc
Q 016256 168 RKDDVC--RKIVTDGLLALGYDASICKS--RWDKTPSY--PTGEYEYIDVVIQGER--LIVDIDFRSE 227 (392)
Q Consensus 168 ~~~~~~--rr~v~~~LR~~GydAaiCkS--rW~~S~~~--paG~hEYIDVv~~~~R--~IVD~dFR~q 227 (392)
+.+.|+ ...+...|+++||++..+.. .|...+.+ ++..|-.+-|.+.+.+ ||||+.|=+.
T Consensus 69 RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 136 (278)
T 1w5r_A 69 RGGYQYEHNGLLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVPGADGRYLVDVGFGGQ 136 (278)
T ss_dssp CCBCHHHHHHHHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECSSCSCCEEECSCSCTT
T ss_pred CceehHHHHHHHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEECCeEEEEEEecCCCcc
Confidence 445563 67788899999999999876 47666666 4788999999999989 9999999774
No 5
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=94.41 E-value=0.082 Score=50.10 Aligned_cols=60 Identities=22% Similarity=0.351 Sum_probs=48.9
Q ss_pred cchhhh--HHHHHHHHHhcCCceEEEee--cCCCCCCC--CCcccceEEEEEcCee--EEEecCcccc
Q 016256 168 RKDDVC--RKIVTDGLLALGYDASICKS--RWDKTPSY--PTGEYEYIDVVIQGER--LIVDIDFRSE 227 (392)
Q Consensus 168 ~~~~~~--rr~v~~~LR~~GydAaiCkS--rW~~S~~~--paG~hEYIDVv~~~~R--~IVD~dFR~q 227 (392)
+.+.|+ ...+...|+++||++..+.. .|...+.. ++..|--+-|.+.+.+ ||||+.|=+.
T Consensus 66 RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 66 RGGYCYEHNGLIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFPGCQGPYLVDVGFGGM 133 (280)
T ss_dssp CCBCHHHHHHHHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECTTCSSCEEECSCSGGG
T ss_pred CceEhHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEECCeEEEEEEecCCCcc
Confidence 445563 67788899999999999876 47666666 4788999999999989 9999999774
No 6
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}
Probab=93.69 E-value=0.12 Score=50.15 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=47.9
Q ss_pred cchhh--hHHHHHHHHHhcCCceEEEeec--CCCCCCC-CCcccceEEEEEcCeeEEEecCcccc
Q 016256 168 RKDDV--CRKIVTDGLLALGYDASICKSR--WDKTPSY-PTGEYEYIDVVIQGERLIVDIDFRSE 227 (392)
Q Consensus 168 ~~~~~--~rr~v~~~LR~~GydAaiCkSr--W~~S~~~-paG~hEYIDVv~~~~R~IVD~dFR~q 227 (392)
+.+.| +...+...|+++||++..+..+ |...+.. +.+.|--+-|.+.+.+||||+.|-+.
T Consensus 95 RGGyC~ElN~lf~~~L~~lGf~v~~~~arV~~~~~~~~~~~~~H~~l~V~~~g~~ylvDVGFG~~ 159 (309)
T 3lnb_A 95 RGGLCYELNSLLYYFLMDCGFQVYKVAGTVYDLYDNKWKPDDGHVIIILHHNKKDYVIDAGFASH 159 (309)
T ss_dssp CCBCHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECSTTCEEEEEEEETTEEEEECSCSTTC
T ss_pred CCcchHHHHHHHHHHHHHcCCeEEEEeEEEecCCCCCCCCCCccEEEEEEECCeEEEEecCCCCc
Confidence 44556 3678899999999999999875 3333333 56789999999999999999999874
No 7
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=93.67 E-value=0.12 Score=49.48 Aligned_cols=57 Identities=14% Similarity=0.209 Sum_probs=46.5
Q ss_pred cchhhh--HHHHHHHHHhcCCceEEEeec--CCCCCCCCCcccceEEE-EEc-CeeEEEecCcc
Q 016256 168 RKDDVC--RKIVTDGLLALGYDASICKSR--WDKTPSYPTGEYEYIDV-VIQ-GERLIVDIDFR 225 (392)
Q Consensus 168 ~~~~~~--rr~v~~~LR~~GydAaiCkSr--W~~S~~~paG~hEYIDV-v~~-~~R~IVD~dFR 225 (392)
+.+.|+ ...+...|+++||++..+..+ |... ..++..|--+-| .+. |.+||||+.|=
T Consensus 78 RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~-~~~~~~H~~l~V~~l~dg~~ylvDVGFG 140 (293)
T 3d9w_A 78 RGGYCYENAGLFAAALERLGFGVTGHTGRVTMGAG-GLRPATHALLRVTTADDDRVWMCDVGFG 140 (293)
T ss_dssp CCBCHHHHHHHHHHHHHHTTCEEEEEEEEECTTCC-SCCCEEEEEEEEECSSCSCEEEECCSSS
T ss_pred CCcChHHHHHHHHHHHHHcCCeEEEEEEEEecCCC-CCCCCccEEEEEEEcCCCCeEEEecCCC
Confidence 445563 678899999999999998774 5433 456789999999 888 99999999997
No 8
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A*
Probab=92.89 E-value=0.19 Score=47.85 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=47.5
Q ss_pred cchhhh--HHHHHHHHHhcCCceEEEeec--CCCCCCC-CCcccceEEEEEcCeeEEEecCcccce
Q 016256 168 RKDDVC--RKIVTDGLLALGYDASICKSR--WDKTPSY-PTGEYEYIDVVIQGERLIVDIDFRSEF 228 (392)
Q Consensus 168 ~~~~~~--rr~v~~~LR~~GydAaiCkSr--W~~S~~~-paG~hEYIDVv~~~~R~IVD~dFR~qF 228 (392)
|.+.|+ ...+...|+++||++..+..+ |...+.+ +...|--+-|.+.+.+||||+.|=+..
T Consensus 69 RGGyC~ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~~~~~~~~H~~l~V~idg~~ylvDVGFG~~~ 134 (295)
T 2ija_A 69 RGGWCLQVNHLLYWALTTIGFETTMLGGYVYSTPAKKYSTGMIHLLLQVTIDGRNYIVDAGSGRSY 134 (295)
T ss_dssp CCBCHHHHHHHHHHHHHHHTCEEEEEEEEEEETTTTEECSSCCEEEEEEEETTEEEEECSCCCGGG
T ss_pred CcEEhHHHHHHHHHHHHHcCCcEEEEEEEEeeCCCCCCCCCCCcEEEEEEECCceEEEeCCCCCcc
Confidence 345563 677888999999999998764 4333333 357899999999999999999998764
No 9
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=58.73 E-value=17 Score=36.84 Aligned_cols=51 Identities=8% Similarity=0.025 Sum_probs=41.7
Q ss_pred hHHHHHHHHHhcCCceEEEeecCCCC----CCCCCcccceEEEEEcCeeEEEecC
Q 016256 173 CRKIVTDGLLALGYDASICKSRWDKT----PSYPTGEYEYIDVVIQGERLIVDID 223 (392)
Q Consensus 173 ~rr~v~~~LR~~GydAaiCkSrW~~S----~~~paG~hEYIDVv~~~~R~IVD~d 223 (392)
+-..++..||++|..|..|--.-... ..+|+..|-.+.|.++|..|++|+-
T Consensus 290 ~a~Ll~AllRa~GIpA~~v~~~t~~~~~~~~~lp~~nh~i~~v~~~g~~y~lDat 344 (506)
T 3kd4_A 290 IAQLLNVMLNAAGIPSEVLAVYPGHLDTDACGLAAIQTLAVKATVDGKDQYLSAS 344 (506)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSCGGGCCSTTCCEEEEEEEETTEEEEESSS
T ss_pred HHHHHHHHHHHCCCCcEEEEEEcCCCCCccCCCCCCCEEEEEEEECCEEEEEecC
Confidence 35688999999999999887653322 4577779999999999999999993
No 10
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=52.07 E-value=80 Score=30.04 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=19.8
Q ss_pred HHHHHHHHhcCCceEEEeecCCCCCC
Q 016256 175 KIVTDGLLALGYDASICKSRWDKTPS 200 (392)
Q Consensus 175 r~v~~~LR~~GydAaiCkSrW~~S~~ 200 (392)
..|.+.++.+||.+.++-+..+....
T Consensus 18 ~~i~~aa~~lG~~vv~v~~~~~~~~~ 43 (425)
T 3vot_A 18 PFIFEEAERLGLKVTFFYNSAEDFPG 43 (425)
T ss_dssp CHHHHHHHHTTCEEEEEEETTSCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCCccccc
Confidence 45778889999999998887655433
No 11
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=45.15 E-value=38 Score=31.00 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=54.1
Q ss_pred HHHHHHHHhcCCceEEEeecCCCCCCCCCcccceEEEEEcCeeEEEecCcccceeeccCcHHHHHHHHhCCCceeeChhh
Q 016256 175 KIVTDGLLALGYDASICKSRWDKTPSYPTGEYEYIDVVIQGERLIVDIDFRSEFEIARSTKTYKSILQILPYLFVGKADR 254 (392)
Q Consensus 175 r~v~~~LR~~GydAaiCkSrW~~S~~~paG~hEYIDVv~~~~R~IVD~dFR~qFeIARpT~~Y~~lL~~LP~vFVG~~er 254 (392)
+.|++.|+..||++.++-++ . ..+.....+-+|+++. -+...|- -....+.+|+.+---|+|....
T Consensus 35 ~~v~~al~~~g~~v~~i~~~--~-~~~~~l~~~~~D~v~~--------~~hg~~g---e~~~~~~~le~~gip~~g~~~~ 100 (317)
T 4eg0_A 35 RLVLQGLRDAGIDAHPFDPA--E-RPLSALKDEGFVRAFN--------ALHGGYG---ENGQIQGALDFYGIRYTGSGVL 100 (317)
T ss_dssp HHHHHHHHHTTCEEEEECTT--T-SCTTHHHHTTCCEEEE--------CCCSGGG---TSSHHHHHHHHHTCEESSCCHH
T ss_pred HHHHHHHHHCCCEEEEEeCC--C-chHHHhhhcCCCEEEE--------cCCCCCC---chHHHHHHHHHcCCCeeCcCHH
Confidence 67889999999999998632 1 1111111122344431 0111110 0123468888888889987643
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCch
Q 016256 255 LQKIIAIASEAAKQSLKKKGMHVPPWRKA 283 (392)
Q Consensus 255 L~~iV~lmc~Aak~S~k~~Gm~lPPWRk~ 283 (392)
...+.. ==..+++-|++.|+++|||+..
T Consensus 101 ~~~~~~-dK~~~k~~l~~~Gip~p~~~~~ 128 (317)
T 4eg0_A 101 GSALGL-DKFRTKLVWQQTGVPTPPFETV 128 (317)
T ss_dssp HHHHHH-CHHHHHHHHHHTTCCCCCEEEE
T ss_pred HHHHHh-CHHHHHHHHHHCCcCCCCEEEE
Confidence 322211 0135677899999999999853
No 12
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=32.41 E-value=39 Score=31.99 Aligned_cols=47 Identities=19% Similarity=0.400 Sum_probs=32.3
Q ss_pred HHHHHHHhCCCceeeChhhHHHHHHHHHHHHHHHHHhcCCCCCCCCch
Q 016256 236 TYKSILQILPYLFVGKADRLQKIIAIASEAAKQSLKKKGMHVPPWRKA 283 (392)
Q Consensus 236 ~Y~~lL~~LP~vFVG~~erL~~iV~lmc~Aak~S~k~~Gm~lPPWRk~ 283 (392)
..+.+|+.+---|+|..-....+. .==..+|+-|++.|+++|||+..
T Consensus 115 ~iq~~le~~gip~~G~~~~a~~~~-~DK~~~k~~l~~~Gip~p~~~~~ 161 (364)
T 3i12_A 115 SLQGMLRVANLPFVGSDVLSSAAC-MDKDVAKRLLRDAGLNIAPFITL 161 (364)
T ss_dssp HHHHHHHHTTCCBSSCCHHHHHHH-HCHHHHHHHHHHTTCCBCCEEEE
T ss_pred HHHHHHHHcCCCccCCCHHHHHHH-HCHHHHHHHHHHCCCCCCCEEEE
Confidence 467888888877999863322221 01235778899999999999743
No 13
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=28.23 E-value=1.4e+02 Score=26.40 Aligned_cols=94 Identities=16% Similarity=0.169 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCceEEEeecCCCCCCCCCcccceEEEEEcCeeEEEecCcccceeeccCcHHHHHHHHhCCCceeeChhh
Q 016256 175 KIVTDGLLALGYDASICKSRWDKTPSYPTGEYEYIDVVIQGERLIVDIDFRSEFEIARSTKTYKSILQILPYLFVGKADR 254 (392)
Q Consensus 175 r~v~~~LR~~GydAaiCkSrW~~S~~~paG~hEYIDVv~~~~R~IVD~dFR~qFeIARpT~~Y~~lL~~LP~vFVG~~er 254 (392)
+.|+..|+.+||++.++-.. +. .......+-+|+++.. +...+.+ ...++.+++.+--.|+|....
T Consensus 24 ~~l~~al~~~G~~v~~~~~~-~~--~~~~~~~~~~d~v~~~----~~~~~~e-------~~~~~~~~e~~g~~~~g~~~~ 89 (306)
T 1iow_A 24 AAVLAGLREGGIDAYPVDPK-EV--DVTQLKSMGFQKVFIA----LHGRGGE-------DGTLQGMLELMGLPYTGSGVM 89 (306)
T ss_dssp HHHHHHHHHTTCEEEEECTT-TS--CGGGTTTTTEEEEEEC----CCSTTTS-------SSHHHHHHHHHTCCBSSCCHH
T ss_pred HHHHHHHHHCCCeEEEEecC-ch--HHHHhhccCCCEEEEc----CCCCCCc-------chHHHHHHHHcCCCccCCCHH
Confidence 67888999999999888543 11 0000111234554321 0111111 113356777766557776443
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCch
Q 016256 255 LQKIIAIASEAAKQSLKKKGMHVPPWRKA 283 (392)
Q Consensus 255 L~~iV~lmc~Aak~S~k~~Gm~lPPWRk~ 283 (392)
...+.. ==..+++-|++.|+++|||+..
T Consensus 90 ~~~~~~-dK~~~~~~l~~~gi~~p~~~~~ 117 (306)
T 1iow_A 90 ASALSM-DKLRSKLLWQGAGLPVAPWVAL 117 (306)
T ss_dssp HHHHHH-CHHHHHHHHHHTTCCBCCEEEE
T ss_pred HHHHHc-CHHHHHHHHHHCCCCCCCeEEE
Confidence 222211 0124677789999999999754
No 14
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=24.05 E-value=41 Score=32.44 Aligned_cols=46 Identities=20% Similarity=0.300 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCCceeeChhhHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 016256 235 KTYKSILQILPYLFVGKADRLQKIIAIASEAAKQSLKKKGMHVPPWR 281 (392)
Q Consensus 235 ~~Y~~lL~~LP~vFVG~~erL~~iV~lmc~Aak~S~k~~Gm~lPPWR 281 (392)
..+.+.+..+--.|+|+......+..- =..+++-|++.|+++|||.
T Consensus 93 ~~~~~~~~~~g~~~~g~~~~~~~~~~d-K~~~~~~l~~~Gip~p~~~ 138 (446)
T 3ouz_A 93 QNFVEICAKHNIKFIGPSVEAMNLMSD-KSKAKQVMQRAGVPVIPGS 138 (446)
T ss_dssp HHHHHHHHHTTCEESSCCHHHHHHHHS-HHHHHHHHHHTTCCBCSBC
T ss_pred HHHHHHHHHCCCceECcCHHHHHHhCC-HHHHHHHHHHcCCCcCCCc
Confidence 346667777666688876443332211 1257788999999999996
No 15
>2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=21.95 E-value=38 Score=29.60 Aligned_cols=30 Identities=33% Similarity=0.690 Sum_probs=24.1
Q ss_pred eeEeecCCCCCCCCcccccCCceeeehhhhh
Q 016256 357 VKVVKDWKPPEIKPKSLQIGARIVTGLASVI 387 (392)
Q Consensus 357 ~~~~~~W~pp~~~~~~~~~~~k~VtGLAs~l 387 (392)
-+..+.|+|+.+.+.+...|+. |||-|...
T Consensus 33 gtLlVsW~Pvt~~~~g~Snga~-VtGY~VYa 62 (130)
T 2csp_A 33 ATIRVSWRPPVLTPTGLSNGAN-VTGYGVYA 62 (130)
T ss_dssp TEEEEEEECCCCCTTSCSSSSC-EEEEEEES
T ss_pred cEEEEEeECCcccCCCCCCCcc-eEEEEEEe
Confidence 4566889999999988888887 89987543
Done!