BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016257
(392 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYE0|PHF1_ARATH SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=2 SV=2
Length = 398
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/387 (62%), Positives = 303/387 (78%), Gaps = 8/387 (2%)
Query: 5 GTVTCGSWIKRPENVNLVVLGKSSR----ASSSPSVLEIFSFDPKTTSVYTSPLVTYVFD 60
G V CGSWI+RP+ VN V++ K+S+ + SSP++L IFSFDP T S+ +SPL T+
Sbjct: 11 GHVVCGSWIRRPKKVNWVLIAKASKRRGSSVSSPALLNIFSFDPITASLSSSPLATHTLK 70
Query: 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF 120
+S+GDP+ ++V+P GD FVCST+ GGCKLFE+ GGAT I +LAK++ PLQ+AG QKC++F
Sbjct: 71 DSDGDPVAVSVHPGGDYFVCSTSKGGCKLFELVGGATGITILAKELLPLQNAGLQKCMAF 130
Query: 121 SVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARI 180
S DGS+ A GGVDG LRIM WP+L +ILDEPKAHKS+ DMDFSLDSEFLATTSTDGSARI
Sbjct: 131 SFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARI 190
Query: 181 WKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK 240
WK EDG + L R+ DE IELCRFSKDGTKPFLFC QRGD ++ VYDISTW K+G K
Sbjct: 191 WKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWKKLGFK 250
Query: 241 RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQ 300
+L RK AS +++SLDGKY+A+G KDGD+ V +VK MEI H+SKRLHLG SIA +EFCP++
Sbjct: 251 KLSRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYHYSKRLHLGQSIASLEFCPSE 310
Query: 301 RVVLTASKEWGAMITKLTVPADWKEWQIYSLLLALFLASAVVFYIFFENSDSFWNFPVAR 360
RV+LT S EWG M+TKLTVP +WKEWQIY+LL LF+AS + Y+FFENSDSFW P+ +
Sbjct: 311 RVMLTTSSEWGEMVTKLTVPKEWKEWQIYALLFCLFMASVIAAYVFFENSDSFWKLPMGK 370
Query: 361 NQHGGPKIESILRDPQS--SDDQNMWN 385
+Q PKI S+ S S+D + WN
Sbjct: 371 DQK-RPKI-SLFGGSSSTPSEDHSRWN 395
>sp|Q39221|STLP2_ARATH SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4
Length = 393
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 14/295 (4%)
Query: 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYG 94
+V+ I D T S+ PL V P +AV+P +C+ N CKLF
Sbjct: 75 NVILICRVDLNTNSLSEQPLGRLVVGSDL--PYRMAVHPREGGLICALPNS-CKLFHWED 131
Query: 95 GATDINLLAKK----MPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150
+ + A + + L+D G Q L+F+ +GS AAG DG LR+ WPS+ +L+E
Sbjct: 132 IMSREDNQAGESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNE 191
Query: 151 PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGT 210
+AH SV + FS +FL + R+W A L++ DE CRFS D
Sbjct: 192 SQAHSSVKCLTFSESGQFLVSLGGP-VCRVWDVNASAAVASLSKEKDEMFASCRFSVDSA 250
Query: 211 KP---FLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGD 267
++ +RG + D W + K + + S ++S DGK LA+G+ +GD
Sbjct: 251 GNEVLYIAANTERGGSIITC--DTKLWKRKWSKPIKKNSISAFNVSADGKLLAIGTLEGD 308
Query: 268 ICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPAD 322
+ +++ +M+ K+ HLG AL F P R +++ S + A +T + D
Sbjct: 309 VLILESTRMQTIQVVKKAHLGLVTALT-FSPDSRGLVSVSFDSRARLTMIEQKGD 362
>sp|Q9WUQ2|PREB_MOUSE Prolactin regulatory element-binding protein OS=Mus musculus
GN=Preb PE=1 SV=1
Length = 417
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 115 QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTS 173
QK + F+ D + A GG DGH+R+ PSL +L E KAH+ + D+ D + L T
Sbjct: 157 QKVVCFNHDNTLLATGGTDGHVRVWKVPSLEKVL-EFKAHEGEIGDLTLGPDGK-LVTVG 214
Query: 174 TDGSARIWK----------TEDGVAWTFLTRNSDEKIELCRFSK--DGTKPFLFCTVQRG 221
D A +W+ E+G A + N+ + + CRF + D TVQ
Sbjct: 215 WDFKASVWQKDQLVTQLQWQENGPA----SSNTPYRYQACRFGQVPDQLGGLRLFTVQIP 270
Query: 222 DKAL-------LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274
K L L +D ST+ + + + S LS+S G +L +G+ G + +
Sbjct: 271 HKRLRQPPPCYLTAWDSSTFLPLRTRSCGHEVISCLSVSDSGTFLGLGTVTGSVAIYIAF 330
Query: 275 KMEINHWSKRLHLGTSIALVEFCPTQ 300
++ ++ K H G + V F P +
Sbjct: 331 SLQRLYYVKEAH-GIVVTDVTFLPEK 355
>sp|Q9WTV0|PREB_RAT Prolactin regulatory element-binding protein OS=Rattus norvegicus
GN=Preb PE=2 SV=2
Length = 417
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 115 QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTS 173
QK + F+ D + A GG DGH+R+ PSL +L E KAH+ + D+ D + L T
Sbjct: 157 QKVVCFNHDNTLLATGGSDGHVRVWKVPSLEKVL-EFKAHEGEIGDLALGPDGK-LVTVG 214
Query: 174 TDGSARIWKTEDGVA---WTF---LTRNSDEKIELCRFSKDGTKP--FLFCTVQRGDKAL 225
D A +W+ + V W + N+ + + CRF + +P TVQ K L
Sbjct: 215 WDFKASVWQKDQLVTQLQWQENGPTSSNTPYRYQACRFGQVPDQPGGLRLFTVQIPHKRL 274
Query: 226 -------LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278
L +D ST+ + + + S L++S G +L +G+ G + + ++
Sbjct: 275 RQPPPCYLTAWDSSTFLPLQTRSCGHEVISCLTVSESGTFLGLGTVTGSVAIYIAFSLQR 334
Query: 279 NHWSKRLHLGTSIALVEFCP 298
++ K H G + V F P
Sbjct: 335 LYYVKEAH-GIVVTDVTFLP 353
>sp|Q5ZME8|SMU1_CHICK WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2
SV=1
Length = 513
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
LAT + DG ++WK + G R + + FSKD ++ + +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ-----ILSASFDQTIR 332
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285
++ + + + R + + + DG Y+ S DG + V +VK E ++ K L
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNTFKSL 390
>sp|Q9HCU5|PREB_HUMAN Prolactin regulatory element-binding protein OS=Homo sapiens
GN=PREB PE=1 SV=2
Length = 417
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 115 QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTS 173
QK + F+ D + A GG DG++R+ PSL +L E KAH+ + D+ D + L T
Sbjct: 157 QKVVCFNHDNTLLATGGTDGYVRVWKVPSLEKVL-EFKAHEGEIEDLALGPDGK-LVTVG 214
Query: 174 TDGSARIWKTEDGVAWTFLTRN------SDEKIELCRFSKDGTKP--FLFCTVQRGDKAL 225
D A +W+ + V N + + + CRF + +P TVQ K L
Sbjct: 215 RDLKASVWQKDQLVTQLHWQENGPTFSSTPYRYQACRFGQVPDQPAGLRLFTVQIPHKRL 274
Query: 226 -------LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278
L +D S + + K + S L +S G +L +G+ G + + ++
Sbjct: 275 RQPPPCYLTAWDGSNFLPLRTKSCGHEVVSCLDVSESGTFLGLGTVTGSVAIYIAFSLQC 334
Query: 279 NHWSKRLHLGTSIALVEFCPTQ 300
++ + H G + V F P +
Sbjct: 335 LYYVREAH-GIVVTDVAFLPEK 355
>sp|Q9I9H8|APAF_DANRE Apoptotic protease-activating factor 1 OS=Danio rerio GN=apaf1 PE=2
SV=1
Length = 1261
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 11/179 (6%)
Query: 106 MPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLD 165
M P Q A C FS DGS+ A+ G LR+ S +L+ + VL FS D
Sbjct: 613 MHPHQGAVYYAC--FSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPD 670
Query: 166 SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF-CTVQRGDKA 224
+AT ++D ++W E GV +E+I C+F+ G + L C+ +
Sbjct: 671 DRHIATCASDRKVKLWNVERGVLIREFEVEHEEQINHCQFTNTGRRVLLATCSNDKFTNT 730
Query: 225 LL--AVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHW 281
L S GH +P + S + YLA S DG + + +V N W
Sbjct: 731 RLWNPNKKTSQNTMFGHM----EPVNHCCFSPNDLYLATSSSDGSLKLFEVSSA--NEW 783
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 133 DGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT-- 190
DG +++ +++ D +VL D S D ATTS + +A++W + +W
Sbjct: 1072 DGTVKVWDLTRGQMLQDLVCHEGAVLSCDVSSDGRLFATTSANRTAKVWSS---ASWKML 1128
Query: 191 FLTRNSDEKIELCRFSKDGTK 211
FL + + CRFS D +
Sbjct: 1129 FLLEGHKDCVRSCRFSWDNKR 1149
>sp|Q99M63|SMU1_RAT WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1
PE=2 SV=1
Length = 513
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
LAT + DG ++WK + G R + + FSKD ++ + +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ-----ILSASFDQTIR 332
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285
++ + + + R + + + DG Y+ S DG + + ++K E ++ K L
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
>sp|Q6NRT3|SMU1_XENLA WD40 repeat-containing protein SMU1 OS=Xenopus laevis GN=smu1 PE=2
SV=1
Length = 513
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
LAT + DG ++WK + G R + + FSKD ++ Q +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQ-----TIR 332
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285
++ + + + R + + + DG Y+ S DG + + ++K E ++ K L
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
>sp|Q3UKJ7|SMU1_MOUSE WD40 repeat-containing protein SMU1 OS=Mus musculus GN=Smu1 PE=2
SV=2
Length = 513
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
LAT + DG ++WK + G R + + FSKD ++ + +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ-----ILSASFDQTIR 332
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285
++ + + + R + + + DG Y+ S DG + + ++K E ++ K L
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
>sp|Q2TAY7|SMU1_HUMAN WD40 repeat-containing protein SMU1 OS=Homo sapiens GN=SMU1 PE=1
SV=2
Length = 513
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
LAT + DG ++WK + G R + + FSKD ++ + +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ-----ILSASFDQTIR 332
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285
++ + + + R + + + DG Y+ S DG + + ++K E ++ K L
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
>sp|Q76B40|SMU1_CRIGR WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1
PE=2 SV=1
Length = 513
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
LAT + DG ++WK + G R + + FSKD ++ + +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ-----ILSASFDQTIR 332
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285
++ + + + R + + + DG Y+ S DG + + ++K E ++ K L
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
>sp|Q2TBS9|SMU1_BOVIN WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1
Length = 513
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
LAT + DG ++WK + G R + + FSKD ++ + +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ-----ILSASFDQTIR 332
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285
++ + + + R + + + DG Y+ S DG + + ++K E ++ K L
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
>sp|Q6P4J8|SMU1_XENTR WD40 repeat-containing protein SMU1 OS=Xenopus tropicalis GN=smu1
PE=2 SV=1
Length = 513
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMD-------FSLDSE 167
+C FS DG G VDG + + ++ + +I D + +A + + MD FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLA 227
LAT + DG ++WK + G R + + FSKD ++ + +
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDCSQ-----ILSASFDQTIR 332
Query: 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285
V+ + + + R + + + DG Y+ S DG + + ++K E ++ K L
Sbjct: 333 VHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSL 390
>sp|Q7ZVA0|SMU1_DANRE WD40 repeat-containing protein SMU1 OS=Danio rerio GN=smu1 PE=2
SV=1
Length = 513
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK--------SVLDMDFSLDSE 167
+C FS DG G VDG + + ++ + +I D + +VL M FS D+E
Sbjct: 218 ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTE 277
Query: 168 FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211
LAT + DG ++WK + G R + + FSKD T+
Sbjct: 278 MLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQ 321
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRI--MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS 173
+ ++FS DG+ A+G D +R+ + R + E H VLD+ FS D +A+ S
Sbjct: 505 RAVAFSPDGALLASGSDDATVRLWDVAAAEERAVF-EGHTHY-VLDIAFSPDGSMVASGS 562
Query: 174 TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK-ALLAVYDIS 232
DG+AR+W G L ++D + FS DG+ V G + + ++D++
Sbjct: 563 RDGTARLWNVATGTEHAVLKGHTD-YVYAVAFSPDGS------MVASGSRDGTIRLWDVA 615
Query: 233 TWNKIGHKRLLRKPAS---VLSISLDGKYLAMGSKDGDICVVDVKKMEINH 280
T + + +L+ PA L+ S DG L GS D + + DV E H
Sbjct: 616 TGKE---RDVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASGEALH 662
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 23/206 (11%)
Query: 78 FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137
F+ + N +F V G I LL ++ + + ++FS DG A G D +R
Sbjct: 313 FLATGCNRAAMVFNVETGKL-ITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIR 371
Query: 138 IMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD 197
I R+ + + +DFS D + L + S D + +W E G L ++D
Sbjct: 372 IWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL--HTD 429
Query: 198 EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH--KRLLRKPASVLSISL- 254
+ + FS DG F DK I W G ++L SV S++
Sbjct: 430 DGVTTVMFSPDGQ----FIAAGSLDKV------IRIWTSSGTLVEQLHGHEESVYSVAFS 479
Query: 255 -DGKYLAMGSKDGDI------CVVDV 273
DGKYL GS D I CV +V
Sbjct: 480 PDGKYLVSGSLDNTIKLWELQCVSNV 505
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 27/178 (15%)
Query: 142 PSLRIILDEPKAHKSVL-DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEK- 199
P + + L H SV+ + FS D +FLAT + +A ++ E G T L S ++
Sbjct: 286 PPISVQLLHTLEHTSVICYVRFSADGKFLAT-GCNRAAMVFNVETGKLITLLQEESSKRE 344
Query: 200 ----IELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR------KPASV 249
+ FS DG +L V+ I W+ I KR+ R +
Sbjct: 345 GDLYVRSVAFSPDGK--YLATGVED--------QQIRIWD-IAQKRVYRLLTGHEQEIYS 393
Query: 250 LSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTAS 307
L S DGK L GS D +C+ DV E LH + V F P + + S
Sbjct: 394 LDFSKDGKTLVSGSGDRTVCLWDV---EAGEQKLILHTDDGVTTVMFSPDGQFIAAGS 448
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 43/152 (28%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDGSA 178
FS DG AAG +D +RI W S ++++ H+ SV + FS D ++L + S D +
Sbjct: 437 FSPDGQFIAAGSLDKVIRI--WTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTI 494
Query: 179 RIWKTE--DGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
++W+ + VA + +C+ + G K F+
Sbjct: 495 KLWELQCVSNVAPSMYKEGG-----ICKQTFTGHKDFILS-------------------- 529
Query: 237 IGHKRLLRKPASVLSISLDGKYLAMGSKDGDI 268
+++S DGK++ GSKD I
Sbjct: 530 -------------VTVSPDGKWIISGSKDRTI 548
>sp|Q5B8Y3|EIF3I_EMENI Eukaryotic translation initiation factor 3 subunit I OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=tif34 PE=3 SV=1
Length = 336
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 160 MDFSLDSEFLATTSTDGSARIWKTEDG---VAWTFLTRNSDEKIELCRFSKDGTKPFLFC 216
+D S ++ LAT S D S R+W + G W F T ++ FS DG+K
Sbjct: 58 VDVSPNTVLLATGSADNSVRLWNVKTGECVKVWEFPT-----AVKRVEFSPDGSKVLAVT 112
Query: 217 TVQRGDKALLAVYDIST---WNKIGHKRLLR-----KPASVLSISLDGKYLAMGSKDGDI 268
+ G +AV DI+ + + LR A+V S GKY+ G +DG +
Sbjct: 113 EKRMGFLGTIAVLDINYDGDFTNQAEEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSV 172
Query: 269 CVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMI 314
D K E + I ++F P + LTASK+ A +
Sbjct: 173 SQYDAKTGEQLENVQAHEFDHQINDLQFSPDRTHFLTASKDKSAKL 218
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C +F+ + +G D +RI + + + P V + F+ D + ++S DG
Sbjct: 161 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 220
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
RIW T G L + + + +FS +G K L T+ L ++D S
Sbjct: 221 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDN----TLKLWDYSKGKC 275
Query: 237 I----GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292
+ GHK + S++ GK++ GS+D + + +++ E+ ++L T
Sbjct: 276 LKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNMVYIWNLQSKEV---VQKLQGHTDTV 331
Query: 293 LVEFC-PTQRVVLTASKE 309
L C PT+ ++ +A+ E
Sbjct: 332 LCTACHPTENIIASAALE 349
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C +F+ + +G D +RI + + + P V + F+ D + ++S DG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
RIW T G L + + + +FS +G K L T+ L ++D S
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDN----TLKLWDYSKGKC 248
Query: 237 I----GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292
+ GHK + S++ GK++ GS+D + + +++ EI ++L T +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNLQTKEI---VQKLQGHTDVV 304
Query: 293 LVEFC-PTQRVVLTASKE 309
+ C PT+ ++ +A+ E
Sbjct: 305 ISTACHPTENIIASAALE 322
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C +F+ + +G D +RI + + + P V + F+ D + ++S DG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
RIW T G L + + + +FS +G K L T+ L ++D S
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDN----TLKLWDYSKGKC 248
Query: 237 I----GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292
+ GHK + S++ GK++ GS+D + + +++ EI ++L T +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNLQTKEI---VQKLQGHTDVV 304
Query: 293 LVEFC-PTQRVVLTASKE 309
+ C PT+ ++ +A+ E
Sbjct: 305 ISTACHPTENIIASAALE 322
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C +F+ + +G D +RI + + + P V + F+ D + ++S DG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
RIW T G L + + + +FS +G K L T+ L ++D S
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDN----TLKLWDYSKGKC 248
Query: 237 I----GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292
+ GHK + S++ GK++ GS+D + + +++ EI ++L T +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNLQTKEI---VQKLQGHTDVV 304
Query: 293 LVEFC-PTQRVVLTASKE 309
+ C PT+ ++ +A+ E
Sbjct: 305 ISTACHPTENIIASAALE 322
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C +F+ + +G D +RI + + + P V + F+ D + ++S DG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
RIW T G L + + + +FS +G K L T+ L ++D S
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDN----TLKLWDYSKGKC 248
Query: 237 I----GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292
+ GHK + S++ GK++ GS+D + + +++ EI ++L T +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNLQTKEI---VQKLQGHTDVV 304
Query: 293 LVEFC-PTQRVVLTASKE 309
+ C PT+ ++ +A+ E
Sbjct: 305 ISTACHPTENIIASAALE 322
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 17/197 (8%)
Query: 102 LAKKMPPLQDAGPQ-KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEP----KAHK- 155
+ K + L D G C +FS S A +D +R+ SLR + P K H
Sbjct: 1 MVKLIHTLADHGDDVNCCAFSF--SLLATCSLDKTIRLY---SLRDFTELPHSPLKFHTY 55
Query: 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215
+V FS LA+ STDG+ +W TE+G + + S + +C+FS D T
Sbjct: 56 AVHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDST----- 110
Query: 216 CTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
C + +++ ++ + + + S +G + GS GD+ V D K
Sbjct: 111 CLASGAADGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVWD-DK 169
Query: 276 MEINHWSKRLHLGTSIA 292
M H K LG +
Sbjct: 170 MRCPHSEKAHDLGITCC 186
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C F+ G+ A+G D +RI + I P V + F+ D +LA+ S DG
Sbjct: 195 CCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDG 254
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF---LFCTVQRGDKALLAVYDIST 233
RIW + G L I +FS +G L T++ D L V T
Sbjct: 255 IVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYT 314
Query: 234 WNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL 293
GH+ A+ S++ GK++ GS+D + + +++ EI + H T++
Sbjct: 315 ----GHENSKYCVAANFSVT-GGKWIVSGSEDHKVYIWNLQTREILQ-TLDGH-NTAVMC 367
Query: 294 VEFCPTQRVVLTASKE 309
+ P Q ++ +A+ E
Sbjct: 368 TDCHPGQNIIASAALE 383
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 36/168 (21%)
Query: 141 WPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDGSARIWKTE--------------D 185
WP+ +++ + P AHK S+ + FS D ++ + S D S +IW+ + +
Sbjct: 93 WPTYKLVAEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLGIN 152
Query: 186 GVAWT----FLTRNSDEKI--------ELCRFSKDGTKPFLFCTVQRGDKALLA--VYD- 230
+W+ + SD+K+ C + G ++FC L+A +D
Sbjct: 153 EFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDE 212
Query: 231 -ISTW-----NKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVD 272
I W N I P S + + DG YLA GS DG + + D
Sbjct: 213 TIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWD 260
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 114 PQKCLSFSVDGSRFAAGGVDGHLRIMHWPS-----LRIILDEPKAHKSVLDMDFSLDSEF 168
P + F+ DG+ A+G DG +RI W S ++ ++DE H + + FS + ++
Sbjct: 234 PVSSVCFNRDGAYLASGSYDGIVRI--WDSTTGTCVKTLIDE--EHPPITHVKFSPNGKY 289
Query: 169 LATTSTDGSARIW 181
+ ++ + + ++W
Sbjct: 290 ILASNLNNTLKLW 302
>sp|P63245|GBLP_RAT Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Rattus
norvegicus GN=Gnb2l1 PE=1 SV=3
Length = 317
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T + E + RFS + + P + V G L+ V++++ N
Sbjct: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII---VSCGWDKLVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|P63246|GBLP_PIG Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Sus
scrofa GN=GNB2L1 PE=2 SV=3
Length = 317
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T + E + RFS + + P + V G L+ V++++ N
Sbjct: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII---VSCGWDKLVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|P68040|GBLP_MOUSE Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Mus
musculus GN=Gnb2l1 PE=1 SV=3
Length = 317
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T + E + RFS + + P + V G L+ V++++ N
Sbjct: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII---VSCGWDKLVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|Q4R7Y4|GBLP_MACFA Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Macaca
fascicularis GN=GNB2L1 PE=2 SV=3
Length = 317
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T + E + RFS + + P + V G L+ V++++ N
Sbjct: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII---VSCGWDKLVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|P63244|GBLP_HUMAN Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Homo
sapiens GN=GNB2L1 PE=1 SV=3
Length = 317
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T + E + RFS + + P + V G L+ V++++ N
Sbjct: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII---VSCGWDKLVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|P63247|GBLP_CHICK Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Gallus
gallus GN=GNB2L1 PE=2 SV=1
Length = 317
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T + E + RFS + + P + V G L+ V++++ N
Sbjct: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII---VSCGWDKLVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|P63243|GBLP_BOVIN Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Bos
taurus GN=GNB2L1 PE=2 SV=3
Length = 317
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T + E + RFS + + P + V G L+ V++++ N
Sbjct: 131 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII---VSCGWDKLVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|Q9EPV5|APAF_RAT Apoptotic protease-activating factor 1 OS=Rattus norvegicus
GN=Apaf1 PE=2 SV=1
Length = 1249
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 10/177 (5%)
Query: 100 NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLD 159
NL + P DA C FS DG R A+ G D L++ + +LD VL
Sbjct: 605 NLSRLVVRPHTDAVYHAC--FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLC 662
Query: 160 MDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219
FS D ++AT S D +IW + G +S E++ C F+ L
Sbjct: 663 CAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHS-EQVNCCHFTNKSNHLLL---AT 718
Query: 220 RGDKALLAVYDISTWNKIGHKRLLRKPASV--LSISLDGKYLAMGSKDGDICVVDVK 274
+ + L ++D++ K + SV S D + LA S DG + + DV+
Sbjct: 719 GSNDSFLKLWDLN--QKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVR 773
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDG 176
+ F+ DG + D +++ +W + + +AH+ +V D DS L + S DG
Sbjct: 1009 IQFTADGKTLISSSEDSVIQVWNWQTEEYVF--LQAHQETVKDFRLLRDSRLL-SWSFDG 1065
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI-STWN 235
+ ++W G T + + C S D TK F + A + +++ S +
Sbjct: 1066 TVKVWNVITGRIERDFTCHQGTVLS-CAISSDATK---FSSTSADKTAKIWSFELPSPLH 1121
Query: 236 KI-GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALV 294
++ GH +R A SLDG LA G +G+I + +V ++ LHL I++
Sbjct: 1122 ELKGHNSCVRCSA----FSLDGILLATGDDNGEIRIWNVSDGQL------LHLCAPISIE 1171
Query: 295 EFCPTQ 300
E T
Sbjct: 1172 EGTATH 1177
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 19/174 (10%)
Query: 14 KRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP 73
K ++ GK+ +SS SV++++++ + YVF ++ + +
Sbjct: 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTEE----------YVFLQAHQETVKDFRLL 1053
Query: 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133
+ + +G K++ V G + + + L A S D ++F++ D
Sbjct: 1054 RDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCA-------ISSDATKFSSTSAD 1106
Query: 134 GHLRIMHWPSLRIILDEPKAHKSVLDMD-FSLDSEFLATTSTDGSARIWKTEDG 186
+I + L L E K H S + FSLD LAT +G RIW DG
Sbjct: 1107 KTAKIWSF-ELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159
>sp|O14727|APAF_HUMAN Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1
PE=1 SV=2
Length = 1248
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 100 NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVL 158
NL + P DA C FS DG R A+ G D L++ + +L E KAH+ VL
Sbjct: 605 NLSRLVVRPHTDAVYHAC--FSEDGQRIASCGADKTLQVFKAETGEKLL-EIKAHEDEVL 661
Query: 159 DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214
FS D F+AT S D +IW + G +S E++ C F+ L
Sbjct: 662 CCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHS-EQVNCCHFTNSSHHLLL 716
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWP-SLRIILDEPKAHKSVLDMD-FSLDSEFLATTSTDGS 177
S D ++F++ D +I W L + L E + H + FS+DS LAT +G
Sbjct: 1093 ISHDATKFSSTSADKTAKI--WSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGE 1150
Query: 178 ARIWKTEDG 186
RIW +G
Sbjct: 1151 IRIWNVSNG 1159
>sp|O88879|APAF_MOUSE Apoptotic protease-activating factor 1 OS=Mus musculus GN=Apaf1
PE=1 SV=3
Length = 1249
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 34 PSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVY 93
P+++++ +P+T+ VY + + EGD G E
Sbjct: 561 PNIVQLGLCEPETSEVYRQAKLQA---KQEGDT-------------------GRLYLEWI 598
Query: 94 GGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153
T NL + P DA C FS DG R A+ G D L++ + +LD
Sbjct: 599 NKKTIKNLSRLVVRPHTDAVYHAC--FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAH 656
Query: 154 HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213
VL FS D ++AT S D +IW + G +S E++ C F+
Sbjct: 657 EDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS-EQVNCCHFTNKSNHLL 715
Query: 214 L 214
L
Sbjct: 716 L 716
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDG 176
+ F+ DG + D +++ +W + + +AH+ +V D DS L + S DG
Sbjct: 1009 IQFTADGKTLISSSEDSVIQVWNWQTGDYVF--LQAHQETVKDFRLLQDSRLL-SWSFDG 1065
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI-STWN 235
+ ++W G T + + C S D TK F + A + +D+ S +
Sbjct: 1066 TVKVWNVITGRIERDFTCHQGTVLS-CAISSDATK---FSSTSADKTAKIWSFDLLSPLH 1121
Query: 236 KI-GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH 280
++ GH +R A SLDG LA G +G+I + +V ++ H
Sbjct: 1122 ELKGHNGCVRCSA----FSLDGILLATGDDNGEIRIWNVSDGQLLH 1163
>sp|E3LB80|EIF3I_PUCGT Eukaryotic translation initiation factor 3 subunit I OS=Puccinia
graminis f. sp. tritici (strain CRL 75-36-700-3 / race
SCCL) GN=TIF34 PE=3 SV=2
Length = 336
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 27/174 (15%)
Query: 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDG---VAWTFLTRNSDEKIELCRFSKDGTKP 212
+V +D SEF+ + S D S R+WK G AW F T I+ +S+D TK
Sbjct: 54 TVWSVDVDSKSEFMVSGSADNSMRLWKVSTGECLKAWEFPT-----AIKRVSWSEDDTKI 108
Query: 213 FLFCTVQRGDKALLAVYDIS------------TWNKIGHKRLLRKPASVLSISLDGKYLA 260
L + G + + V++I+ +N IG K A V++ S K+L
Sbjct: 109 ALVTEQRMGHQGAVRVFEINRDGGPQPDEPLLVFNPIGSK------AQVVAFSSLDKHLI 162
Query: 261 MGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMI 314
G ++G + + DV E ++ H+G I ++ + +T+SK+ A +
Sbjct: 163 TGHENGKVALWDVNTGEEVASKEKNHIGL-ITDLQMSADRTYFVTSSKDKSARL 215
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 36/187 (19%)
Query: 110 QDAGPQK---CLSFSVDGSR---FAAGGVDGHLRIMHWPSLRIILD---------EPKAH 154
+D GPQ L F+ GS+ A +D HL H + D + K H
Sbjct: 129 RDGGPQPDEPLLVFNPIGSKAQVVAFSSLDKHLITGHENGKVALWDVNTGEEVASKEKNH 188
Query: 155 KSVL-DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213
++ D+ S D + T+S D SAR++ D + D + L + KP+
Sbjct: 189 IGLITDLQMSADRTYFVTSSKDKSARLY---DSRTLEVIKSYQDPQTPLNSAALIPGKPY 245
Query: 214 LFCTVQRGDKALLAV---------YDISTWNKIGHKRLLR-----KPASVLSISLDGKYL 259
L G + +AV ++I W+ + + + R P + +++ +GK
Sbjct: 246 LLMG---GGQEAMAVTTTSARQGHFEIRMWHVVFEEEVSRIKGGFGPCNSIAVHPEGKGY 302
Query: 260 AMGSKDG 266
A+G +DG
Sbjct: 303 AIGGEDG 309
>sp|O42249|GBLP_ORENI Guanine nucleotide-binding protein subunit beta-2-like 1
OS=Oreochromis niloticus GN=gnb2l1 PE=2 SV=1
Length = 317
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T E + RFS + + P + V G ++ V++++ N
Sbjct: 131 LWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPII---VSCGWDKMVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|A1CJY4|EIF3I_ASPCL Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=tif34 PE=3 SV=1
Length = 340
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 160 MDFSLDSEFLATTSTDGSARIWKTEDG---VAWTFLTRNSDEKIELCRFSKDGTKPFLFC 216
+D S ++ LAT S D + R+W + G W F T ++ FS DG+K
Sbjct: 58 VDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPT-----AVKRVAFSPDGSKLLAVT 112
Query: 217 TVQRGDKALLAVYDISTWNKIGH--KRLLRKP----------ASVLSISLDGKYLAMGSK 264
+ G +AV+DI+ N G + +P A+V S GKY+ G +
Sbjct: 113 EKRMGFLGTIAVFDINYGNGQGEDLENQAEEPSLRITCSESKATVAGWSYLGKYIIAGHE 172
Query: 265 DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMI 314
DG + D K E + I ++F + +TASK+ A +
Sbjct: 173 DGSVSQYDGKTGEQLENVQAHEFDHQINDIQFSQDRTCFITASKDKSAKL 222
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD 175
+C++FS DG F D ++ + R + + V FS D +A+ S D
Sbjct: 106 RCVNFSSDGQTFITASDDKSIKAWNLHRQRFLFSLTQHTNWVRCARFSPDGRLIASCSDD 165
Query: 176 GSARIWKTEDGVAW-TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234
+ RIW + + TF+ F++ GT C G + + V+DI
Sbjct: 166 KTVRIWDLTNRLCINTFVDYKGHS--NYVDFNQMGT-----CVASAGADSTVKVWDIRMN 218
Query: 235 NKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDV 273
+ H ++ S LS G YL S DG + ++D+
Sbjct: 219 KLLQHYQVHNAGVSSLSFHPSGNYLLTASSDGTLKILDL 257
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGS 177
LSF G+ DG L+I+ R+I VL + FS + A+ +TD
Sbjct: 234 LSFHPSGNYLLTASSDGTLKILDLLEGRLIYTLHGHQGPVLSVTFSKSGDQFASGATDAQ 293
Query: 178 ARIWKT 183
+WKT
Sbjct: 294 VLVWKT 299
>sp|O42248|GBLP_DANRE Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Danio
rerio GN=gnb2l1 PE=2 SV=1
Length = 317
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
S DG +G DG LR+ + K VL + FS D+ + + S D + +
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIK 130
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----N 235
+W T +T + E + RFS + + P + V G ++ V++++ N
Sbjct: 131 LWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPII---VSCGWDKMVKVWNLANCKLKTN 187
Query: 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275
IGH L + +++S DG A G KDG + D+ +
Sbjct: 188 HIGHTGYL----NTVTVSPDGSLCASGGKDGQAMLWDLNE 223
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
Query: 116 KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD 175
+C++FS DG F D ++ + R + + V FS D +A+ S D
Sbjct: 106 RCVNFSSDGHTFITASDDKSIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLIASCSDD 165
Query: 176 GSARIWKTEDGVAW-TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234
+ RIW + + TF+ F+ GT C G + + V+DI T
Sbjct: 166 KTVRIWDITNRLCINTFVDYKGHS--NYVDFNPMGT-----CVASAGVDSTVKVWDIRTN 218
Query: 235 NKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDV 273
+ H ++ + LS G YL S DG + ++D+
Sbjct: 219 KLLQHYQVHNAGVNSLSFHPSGNYLLTASNDGTVKILDL 257
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 43 DPKTTSVY--TSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDIN 100
D KT ++ T+ L F + +G + NP G + + K++++ N
Sbjct: 164 DDKTVRIWDITNRLCINTFVDYKGHSNYVDFNPMGTCVASAGVDSTVKVWDIR-----TN 218
Query: 101 LLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDM 160
L + + +AG LSF G+ DG ++I+ R+I VL +
Sbjct: 219 KLLQHYQ-VHNAGVNS-LSFHPSGNYLLTASNDGTVKILDLLEGRLIYTLHGHQGPVLSV 276
Query: 161 DFSLDSEFLATTSTDGSARIWKT 183
FS + A+ +TD +WKT
Sbjct: 277 AFSKSGDQFASGATDAQVLVWKT 299
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 29/237 (12%)
Query: 40 FSFDPKTTSVYTSPLVTYVFDESEGDPMTIA----------VNPSGDDFVCSTTNGGCKL 89
FS D + ++ +D S+ D +T+ NP GD + + + +L
Sbjct: 1309 FSADGRFVFTVSADQTARQWDISQKDTITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARL 1368
Query: 90 FEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD 149
+ G + +LA +++ FS DG G D ++ W L L
Sbjct: 1369 WTTEGEC--VAVLADHQGWVREG------QFSPDGQWIVTGSADKTAQL--WNVLGKKLT 1418
Query: 150 EPKAHK-SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKD 208
+ H+ +VL++ FS DS+++ T S DG+AR+W G L R+ ++ I FS D
Sbjct: 1419 VLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWNNT-GRELAVL-RHYEKNIFAAEFSAD 1476
Query: 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKD 265
G F+ V D +++I ++G R P S D +Y+ S D
Sbjct: 1477 GQ--FI---VTASDDNTAGIWEI-VGREVGICRGHEGPVYFAQFSADSRYILTASVD 1527
Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAH-KSVLDMDFSLDSEFLATTSTDGSA 178
FS+DG + D R+ W +L + H K V D DFS D F+ T S D +A
Sbjct: 1268 FSLDGQKIVTYSTDNTARL--WTKEGTLLTILRGHQKEVYDADFSADGRFVFTVSADQTA 1325
Query: 179 RIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIG 238
R W T LT +S + F+ G + TV R A L W G
Sbjct: 1326 RQWDISQKDTIT-LTGHS-HWVRNAHFNPKGDR---LLTVSRDKTARL-------WTTEG 1373
Query: 239 --------HKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDV--KKMEINHWSKRLHLG 288
H+ +R+ S DG+++ GS D + +V KK+ + R H
Sbjct: 1374 ECVAVLADHQGWVREG----QFSPDGQWIVTGSADKTAQLWNVLGKKLTV----LRGH-Q 1424
Query: 289 TSIALVEFCPTQRVVLTASKEWGAMI 314
++ V F P + ++TASK+ A +
Sbjct: 1425 DAVLNVRFSPDSQYIVTASKDGTARV 1450
Score = 41.6 bits (96), Expect = 0.010, Method: Composition-based stats.
Identities = 64/280 (22%), Positives = 105/280 (37%), Gaps = 65/280 (23%)
Query: 72 NPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131
N G + ++ +G +L+++ G +I L +++A FS DG
Sbjct: 1146 NCHGQILLTASRDGTARLWDLEG--REIGLCQGHTSWVRNA------QFSPDGQWIVTCS 1197
Query: 132 VDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT 190
DG R+ W K H++ V + +S D + + T+S+DG+AR+W T
Sbjct: 1198 ADGTARL--WDLSSQCFAVLKGHQNWVNNALWSPDGQHIITSSSDGTARVWSRHGKCLGT 1255
Query: 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVL 250
R D I RFS DG K I T++ RL K ++L
Sbjct: 1256 L--RGHDHNIHGARFSLDGQK-------------------IVTYSTDNTARLWTKEGTLL 1294
Query: 251 SI-------------SLDGKYLAMGSKDGDICVVDVKKMEI------NHWSKRLHLGTSI 291
+I S DG+++ S D D+ + + +HW + H
Sbjct: 1295 TILRGHQKEVYDADFSADGRFVFTVSADQTARQWDISQKDTITLTGHSHWVRNAH----- 1349
Query: 292 ALVEFCPTQRVVLTASKE-----WGAMITKLTVPADWKEW 326
F P +LT S++ W + V AD + W
Sbjct: 1350 ----FNPKGDRLLTVSRDKTARLWTTEGECVAVLADHQGW 1385
Score = 35.4 bits (80), Expect = 0.79, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 63 EGDPMTIAVNPSGDD----FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCL 118
EG + ++PS ++ + +TTNG L+ +G IN+L + L
Sbjct: 1010 EGPVTVLRISPSMENTPPLVLTATTNGIAYLWSFHGEL--INVLRGHQEAIT------AL 1061
Query: 119 SFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTDGS 177
+S DG FA D +++ W + + H+ V + FS +FL T+ D +
Sbjct: 1062 DWSADGQYFATASADHTVKL--WQRHGEEVATLRGHEDWVRSVHFSPHHQFLVTSGQDNT 1119
Query: 178 ARIW 181
ARIW
Sbjct: 1120 ARIW 1123
Score = 32.7 bits (73), Expect = 5.5, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVL-DMDFSLDSEFLAT 171
GP FS D VD RI W L L H+S++ FS + +AT
Sbjct: 1507 GPVYFAQFSADSRYILTASVDNTARI--WDFLGRPLLTLAGHQSIVYQARFSPEGNLIAT 1564
Query: 172 TSTDGSARIW 181
S D +AR+W
Sbjct: 1565 VSADHTARLW 1574
>sp|Q8K3E5|AHI1_MOUSE Jouberin OS=Mus musculus GN=Ahi1 PE=1 SV=2
Length = 1047
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 117 CLSFSVDGSRFAAGGV--DGHLRIMHW-PSLRIILDEPKAHKSVLDMDFSLDSEFLATTS 173
CL FS +G AA DG+ I++ PS R + + + D+D+S D +L T+S
Sbjct: 464 CLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLDWSKDDRYLVTSS 523
Query: 174 TDGSARIWKTEDGVAWTF 191
+DG+AR+WK E TF
Sbjct: 524 SDGTARVWKNEINSTSTF 541
>sp|Q6DTM3|AHI1_RAT Jouberin OS=Rattus norvegicus GN=Ahi1 PE=2 SV=1
Length = 1047
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 117 CLSFSVDGSRFAAGGV--DGHLRIMHW-PSLRIILDEPKAHKSVLDMDFSLDSEFLATTS 173
CL FS +G AA DG+ I++ PS R + + + D+D+S D +L T+S
Sbjct: 465 CLDFSHNGRILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLDWSKDDRYLVTSS 524
Query: 174 TDGSARIWKTEDGVAWTF 191
+DG+AR+WK E TF
Sbjct: 525 SDGTARVWKNEINSTSTF 542
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
+SF DGS A G DG++++ H ++ P +K++ + F+ + +A+ + D
Sbjct: 1368 AVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLP-GNKAIYGISFTPQGDLIASANADK 1426
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209
+ +IW+ DG A L D ++ FS DG
Sbjct: 1427 TVKIWRVRDGKALKTLI-GHDNEVNKVNFSPDG 1458
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGS 177
+SFS DG A+ D +R+ S +I P + V ++F+ D LA+TS D +
Sbjct: 1494 VSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKT 1553
Query: 178 ARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKI 237
++W++ DG + +S+ + FS DG + DK + W
Sbjct: 1554 VKLWRSHDGHLLHTFSGHSN-VVYSSSFSPDGR----YIASASEDKT------VKIWQID 1602
Query: 238 GH--KRLLRKPASVLS--ISLDGKYLAMGSKD 265
GH L + A V+S S DGK L GS D
Sbjct: 1603 GHLLTTLPQHQAGVMSAIFSPDGKTLISGSLD 1634
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 118 LSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDG 176
+S S DG A+G +D +++ W + H+ +V + FS D + +A+ +D
Sbjct: 1078 ISISRDGQTIASGSLDKTIKL--WSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDK 1135
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
+ ++W+T DG +T ++ + FS DG + + + + I W+
Sbjct: 1136 TIKLWQTSDGTLLKTIT-GHEQTVNNVYFSPDG----------KNLASASSDHSIKLWDT 1184
Query: 237 IGHKRLLR---KPASVLSI--SLDGKYLAMGSKDGDI 268
+ L+ A V+++ S DG+ +A GS+D +
Sbjct: 1185 TSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTV 1221
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSAR 179
FS DG A+ D +++ S ++++ V+ + FS D + +A S D + +
Sbjct: 1163 FSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVK 1222
Query: 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239
+W +DG L + D + FS DG DK I W +I
Sbjct: 1223 LWHRQDGKLLKTLNGHQDW-VNSLSFSPDGKT----LASASADKT------IKLW-RIAD 1270
Query: 240 KRLLR----KPASV--LSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL 293
+L++ SV ++ S DGK +A S+D I + + +E+ ++ H G A
Sbjct: 1271 GKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTG--HSGGVYA- 1327
Query: 294 VEFCPTQRVVLTAS 307
V F P ++ +AS
Sbjct: 1328 VNFLPDSNIIASAS 1341
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 67 MTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSR 126
+T+ +P G + + KL+ G L K + QD LSFS DG
Sbjct: 1201 ITVRFSPDGQTIAAGSEDKTVKLWHRQDGK-----LLKTLNGHQDW--VNSLSFSPDGKT 1253
Query: 127 FAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIW 181
A+ D +++ +++ + SV D++FS D + +A+ S D + ++W
Sbjct: 1254 LASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLW 1308
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 28/207 (13%)
Query: 112 AGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLAT 171
+G ++F D + A+ +D +R+ P L L+ + V + F D +AT
Sbjct: 1322 SGGVYAVNFLPDSNIIASASLDNTIRLWQRP-LISPLEVLAGNSGVYAVSFLHDGSIIAT 1380
Query: 172 TSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG--------TKPFLFCTVQRGDK 223
DG+ ++W ++DG L N + I F+ G K V+ G K
Sbjct: 1381 AGADGNIQLWHSQDGSLLKTLPGN--KAIYGISFTPQGDLIASANADKTVKIWRVRDG-K 1437
Query: 224 ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK 283
AL + IGH + K ++ S DGK LA S+D + + +V + K
Sbjct: 1438 ALKTL--------IGHDNEVNK----VNFSPDGKTLASASRDNTVKLWNVSD---GKFKK 1482
Query: 284 RLHLGT-SIALVEFCPTQRVVLTASKE 309
L T + V F P +++ +AS +
Sbjct: 1483 TLKGHTDEVFWVSFSPDGKIIASASAD 1509
>sp|Q26544|WSL17_SCHMA WD repeat-containing protein SL1-17 OS=Schistosoma mansoni PE=2
SV=1
Length = 301
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 112 AGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLA 170
A P + +SFS DG A+ D +++ R+++ HK V+ +DF+ D+ L
Sbjct: 186 ATPVRSVSFSPDGRLLASASDDKQIKVFDVRDGRLVIPSLNGHKGWVVSVDFASDNRHLV 245
Query: 171 TTSTDGSARIW 181
T STD S RIW
Sbjct: 246 TASTDCSVRIW 256
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 55 VTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLL----AKKMPPLQ 110
+T +D D TIA +P F+ + ++ GC +N++ A+K +Q
Sbjct: 95 LTKTYDGDPADTWTIAFSPDSR-FLATGSHTGC-----------VNMINVQTAQKEGSIQ 142
Query: 111 DAGP-QKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFL 169
G L++ DGS+ AAG ++G + I + + + A V + FS D L
Sbjct: 143 LEGKFVYXLAYISDGSKLAAGTINGLVSICDLETGSVQFLDGHA-TPVRSVSFSPDGRLL 201
Query: 170 ATTSTDGSARIWKTEDG 186
A+ S D +++ DG
Sbjct: 202 ASASDDKQIKVFDVRDG 218
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 28/166 (16%)
Query: 162 FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221
FS DS FLAT S G + + T + I+L +G + + G
Sbjct: 111 FSPDSRFLATGSHTGCVNMINVQ--------TAQKEGSIQL-----EGKFVYXLAYISDG 157
Query: 222 DK-------ALLAVYDISTWNKIGHKRLL---RKPASVLSISLDGKYLAMGSKDGDICVV 271
K L+++ D+ T G + L P +S S DG+ LA S D I V
Sbjct: 158 SKLAAGTINGLVSICDLET----GSVQFLDGHATPVRSVSFSPDGRLLASASDDKQIKVF 213
Query: 272 DVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKL 317
DV+ + S H G ++ V+F R ++TAS + I L
Sbjct: 214 DVRDGRLVIPSLNGHKGWVVS-VDFASDNRHLVTASTDCSVRIWDL 258
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C +F+ + +G D +RI + + + P V + F+ D + ++S DG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
RIW T G L + + + +FS +G K L T+ L ++D S
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDN----TLKLWDYSKGKC 248
Query: 237 IG----HKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292
+ HK + S++ GK++ GS+D + + +++ E+ ++L T +
Sbjct: 249 LKTYTCHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWNLQTKEV---VQKLQGHTDVV 304
Query: 293 LVEFC-PTQRVVLTASKE 309
+ C PT+ ++ +A+ E
Sbjct: 305 ISTACHPTENIIASAALE 322
>sp|Q0V320|EIF3I_PHANO Eukaryotic translation initiation factor 3 subunit I
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=TIF34 PE=3 SV=2
Length = 332
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 153 AHKSVL-DMDFSLDSEFLATTSTDGSARIWKTEDGV---AWTFLTRNSDEKIELCRFSKD 208
H+ L +D + DS LAT D + R+W+ + G W F T I+ C FS D
Sbjct: 48 GHQGALWTVDVNPDSTLLATGGADNTLRLWEVQTGKLLHTWEFNT-----SIKRCEFSPD 102
Query: 209 GTKPFLFCTVQRGDKALLAVYDIS--TWNKIGHKRLLR-----KPASVLSISLDGKYLAM 261
G + + G + + VY+I+ K +++LR A+V S KY+
Sbjct: 103 GRQLLGVTEKRSGHLSTIVVYEINPDPEAKQSDEQVLRIVCDESKATVAGFSYLAKYIIS 162
Query: 262 GSKDGDICVVDVKKMEI 278
G +DG + D K E+
Sbjct: 163 GHEDGSVTQWDGKTGEL 179
>sp|O75717|WDHD1_HUMAN WD repeat and HMG-box DNA-binding protein 1 OS=Homo sapiens
GN=WDHD1 PE=1 SV=1
Length = 1129
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 30/172 (17%)
Query: 120 FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEP-----KAHKS-VLDMDFSLDSEFLATTS 173
F+ DG++ AAG D ++I+ ++D + H + VL + F FLA+ S
Sbjct: 102 FNGDGTKIAAGSSDFLVKIVD------VMDSSQQKTFRGHDAPVLSLSFDPKDIFLASAS 155
Query: 174 TDGSARIWKTED---GVAWTFLTRNSD--EKIELCRFS-KDGTKPFLFCTVQRGDKALLA 227
DGS R+W+ D ++W L + +D +CR + + + L V++ K
Sbjct: 156 CDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLAIPVEKSVK---- 211
Query: 228 VYDISTWNKIGHK-----RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274
+Y +W+ H+ + + ++++ S G+YLA GS +G I V +V+
Sbjct: 212 LYRRESWS---HQFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVE 260
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 14/198 (7%)
Query: 117 CLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG 176
C +F+ S +G D +RI + I P V + F+ D +A+ S DG
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 177 SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236
RIW T +G L + + + +FS +G K L + + L ++D S
Sbjct: 236 LVRIWDTANGQCIKTLVDDENPPVAFVKFSPNG-KYILASNLD----STLKLWDFSKGKT 290
Query: 237 I----GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292
+ GH+ + S++ GK++ GS+D I + +++ EI + L T
Sbjct: 291 LKQYTGHENSKYCIFANFSVT-GGKWIISGSEDCKIYIWNLQTREI---VQCLEGHTQPV 346
Query: 293 LVEFC-PTQRVVLTASKE 309
L C P Q ++ + + E
Sbjct: 347 LASDCHPVQNIIASGALE 364
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 41/191 (21%)
Query: 155 KSVLDMDFSLDSEFLATTSTDGSARIWKTE---------------DGVAWTFLTR----N 195
KS+ FS ++L T+S D + +IW + + +AW+ +R
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSA 147
Query: 196 SDEK------IELCRFSK--DGTKPFLFCTVQRGDKALLA---------VYDISTWNKIG 238
SD+K I R +K G ++FC +L+ ++D+ T I
Sbjct: 148 SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK 207
Query: 239 HKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL--HLGTSIALVEF 296
P S +S + DG +A GS DG + + D + K L +A V+F
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC---IKTLVDDENPPVAFVKF 264
Query: 297 CPTQRVVLTAS 307
P + +L ++
Sbjct: 265 SPNGKYILASN 275
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 72 NPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131
NP V + + ++++V G + K +P D P +SF+ DGS A+G
Sbjct: 180 NPQSSLVVSGSFDESVRIWDVKTG-----MCIKTLPAHSD--PVSAVSFNRDGSLIASGS 232
Query: 132 VDGHLRI---MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA 188
DG +RI + ++ ++D+ + V + FS + +++ ++ D + ++W G
Sbjct: 233 YDGLVRIWDTANGQCIKTLVDD--ENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGK- 289
Query: 189 WTFLTRNSDEKIELCRFSK 207
T E + C F+
Sbjct: 290 -TLKQYTGHENSKYCIFAN 307
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,415,999
Number of Sequences: 539616
Number of extensions: 6575758
Number of successful extensions: 18811
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 17461
Number of HSP's gapped (non-prelim): 1318
length of query: 392
length of database: 191,569,459
effective HSP length: 119
effective length of query: 273
effective length of database: 127,355,155
effective search space: 34767957315
effective search space used: 34767957315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)