Query 016257
Match_columns 392
No_of_seqs 688 out of 3251
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 10:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016257.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016257hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.1E-47 3.8E-52 334.7 37.6 288 4-318 32-320 (321)
2 1vyh_C Platelet-activating fac 100.0 1.2E-47 4.1E-52 346.0 35.3 288 4-318 108-410 (410)
3 1nr0_A Actin interacting prote 100.0 1.6E-46 5.6E-51 355.6 39.8 331 4-357 147-610 (611)
4 1vyh_C Platelet-activating fac 100.0 4.9E-46 1.7E-50 335.5 37.7 286 56-356 101-409 (410)
5 3ow8_A WD repeat-containing pr 100.0 7.6E-46 2.6E-50 323.1 36.1 286 54-357 23-320 (321)
6 4gqb_B Methylosome protein 50; 100.0 8.5E-46 2.9E-50 325.2 35.3 294 4-320 30-332 (344)
7 1got_B GT-beta; complex (GTP-b 100.0 1.7E-45 5.7E-50 324.0 37.0 284 4-316 55-340 (340)
8 4g56_B MGC81050 protein; prote 100.0 1E-45 3.4E-50 327.2 33.1 300 4-321 42-345 (357)
9 1nr0_A Actin interacting prote 100.0 1.9E-45 6.4E-50 348.4 37.1 325 4-360 18-399 (611)
10 2ynn_A Coatomer subunit beta'; 100.0 7.8E-45 2.7E-49 314.6 37.5 283 4-318 13-301 (304)
11 2ynn_A Coatomer subunit beta'; 100.0 9.2E-45 3.1E-49 314.2 35.9 290 55-358 5-302 (304)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-44 9.8E-49 316.7 38.9 302 54-366 6-343 (345)
13 1got_B GT-beta; complex (GTP-b 100.0 2.4E-44 8.2E-49 316.6 37.8 288 54-355 46-340 (340)
14 2pbi_B Guanine nucleotide-bind 100.0 2.1E-44 7.2E-49 318.5 36.9 287 4-316 64-354 (354)
15 3iz6_a 40S ribosomal protein R 100.0 5.7E-45 2E-49 325.4 31.3 294 4-321 66-377 (380)
16 4h5i_A Guanine nucleotide-exch 100.0 6.6E-45 2.3E-49 322.8 30.5 304 3-319 13-343 (365)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.1E-44 2.1E-48 314.6 36.4 293 5-323 17-339 (345)
18 4ery_A WD repeat-containing pr 100.0 3.1E-43 1E-47 306.0 39.1 284 4-318 23-311 (312)
19 3frx_A Guanine nucleotide-bind 100.0 2.8E-43 9.6E-48 306.9 38.5 288 4-319 17-317 (319)
20 3frx_A Guanine nucleotide-bind 100.0 3.1E-43 1.1E-47 306.6 37.9 293 54-359 8-318 (319)
21 2pbi_B Guanine nucleotide-bind 100.0 4.4E-43 1.5E-47 310.0 37.1 284 54-355 55-354 (354)
22 2xzm_R RACK1; ribosome, transl 100.0 8.8E-43 3E-47 307.1 37.9 301 54-360 12-342 (343)
23 1erj_A Transcriptional repress 100.0 5.9E-43 2E-47 313.9 37.0 283 4-319 64-389 (393)
24 2hes_X YDR267CP; beta-propelle 100.0 3.5E-43 1.2E-47 307.8 34.7 290 4-319 14-328 (330)
25 4g56_B MGC81050 protein; prote 100.0 1.2E-43 4.1E-48 313.9 30.5 289 60-359 39-344 (357)
26 4gqb_B Methylosome protein 50; 100.0 1.3E-43 4.6E-48 311.2 30.3 286 61-359 28-332 (344)
27 2pm9_A Protein WEB1, protein t 100.0 9.3E-44 3.2E-48 321.7 29.3 300 5-321 13-339 (416)
28 2xzm_R RACK1; ribosome, transl 100.0 6.7E-42 2.3E-46 301.4 39.3 291 4-320 21-341 (343)
29 3iz6_a 40S ribosomal protein R 100.0 2.2E-43 7.4E-48 315.2 29.9 292 52-360 55-377 (380)
30 1gxr_A ESG1, transducin-like e 100.0 4.7E-42 1.6E-46 301.5 37.4 324 4-357 9-336 (337)
31 2hes_X YDR267CP; beta-propelle 100.0 9.4E-42 3.2E-46 298.7 38.3 292 54-358 5-328 (330)
32 2ymu_A WD-40 repeat protein; u 100.0 5.8E-42 2E-46 323.1 39.4 309 4-355 262-577 (577)
33 4ery_A WD repeat-containing pr 100.0 2.1E-41 7.2E-46 294.4 37.3 291 52-357 12-311 (312)
34 1erj_A Transcriptional repress 100.0 1.8E-41 6.2E-46 304.2 36.7 288 61-358 62-389 (393)
35 4aow_A Guanine nucleotide-bind 100.0 8.2E-41 2.8E-45 294.1 39.0 298 54-360 29-339 (340)
36 1r5m_A SIR4-interacting protei 100.0 1.8E-41 6.2E-46 307.2 34.7 327 5-357 46-424 (425)
37 1k8k_C P40, ARP2/3 complex 41 100.0 6.6E-41 2.3E-45 298.4 36.4 290 4-321 8-363 (372)
38 1gxr_A ESG1, transducin-like e 100.0 2.1E-40 7.3E-45 290.9 38.4 286 4-318 51-336 (337)
39 2ymu_A WD-40 repeat protein; u 100.0 1.3E-40 4.6E-45 313.7 39.6 335 4-383 221-564 (577)
40 1k8k_C P40, ARP2/3 complex 41 100.0 4E-40 1.4E-44 293.3 37.1 246 59-319 4-274 (372)
41 4aow_A Guanine nucleotide-bind 100.0 1.5E-39 5.1E-44 286.0 40.3 291 4-321 38-339 (340)
42 1sq9_A Antiviral protein SKI8; 100.0 2.9E-40 1E-44 296.9 35.3 293 4-320 16-396 (397)
43 2pm7_B Protein transport prote 100.0 2.7E-40 9.2E-45 285.2 33.2 251 57-321 3-287 (297)
44 3zwl_B Eukaryotic translation 100.0 1.1E-39 3.7E-44 290.0 37.1 283 4-320 32-347 (369)
45 3dm0_A Maltose-binding peripla 100.0 7.7E-40 2.6E-44 314.8 38.9 289 4-318 382-692 (694)
46 3vl1_A 26S proteasome regulato 100.0 4.8E-41 1.6E-45 304.4 28.3 320 7-358 59-419 (420)
47 1sq9_A Antiviral protein SKI8; 100.0 2.9E-40 9.8E-45 297.0 32.6 289 55-360 8-397 (397)
48 4e54_B DNA damage-binding prot 100.0 2.5E-41 8.4E-46 307.5 25.7 292 4-322 119-433 (435)
49 3dwl_C Actin-related protein 2 100.0 3.3E-41 1.1E-45 301.1 26.0 244 4-274 11-280 (377)
50 2j04_B YDR362CP, TAU91; beta p 100.0 3.3E-41 1.1E-45 310.4 26.5 342 3-359 132-518 (524)
51 3i2n_A WD repeat-containing pr 100.0 4.8E-40 1.6E-44 291.1 33.0 289 4-320 18-354 (357)
52 3sfz_A APAF-1, apoptotic pepti 100.0 6.5E-40 2.2E-44 334.9 38.4 328 4-362 615-1078(1249)
53 3ei3_B DNA damage-binding prot 100.0 3.1E-40 1.1E-44 295.4 31.1 285 4-319 73-382 (383)
54 3dwl_C Actin-related protein 2 100.0 7.9E-41 2.7E-45 298.6 27.1 244 59-318 7-280 (377)
55 3bg1_A Protein SEC13 homolog; 100.0 1.6E-40 5.4E-45 289.1 27.9 254 56-320 6-294 (316)
56 3dm0_A Maltose-binding peripla 100.0 1.3E-39 4.3E-44 313.3 36.0 295 54-357 373-692 (694)
57 3zwl_B Eukaryotic translation 100.0 3.8E-39 1.3E-43 286.4 36.3 296 52-363 21-351 (369)
58 3k26_A Polycomb protein EED; W 100.0 3.2E-40 1.1E-44 293.2 27.5 289 4-318 18-365 (366)
59 2pm9_A Protein WEB1, protein t 100.0 6.4E-41 2.2E-45 303.1 23.3 294 3-319 66-414 (416)
60 1r5m_A SIR4-interacting protei 100.0 2.7E-39 9.2E-44 292.9 32.5 287 4-318 108-424 (425)
61 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-38 5.2E-43 276.2 35.1 281 4-322 18-299 (313)
62 3i2n_A WD repeat-containing pr 100.0 8.2E-39 2.8E-43 283.2 33.3 296 52-360 7-355 (357)
63 3vl1_A 26S proteasome regulato 100.0 3.1E-39 1.1E-43 292.5 30.9 281 65-360 58-367 (420)
64 4aez_A CDC20, WD repeat-contai 100.0 2.2E-38 7.6E-43 285.1 35.7 282 6-322 95-383 (401)
65 3gre_A Serine/threonine-protei 100.0 2.3E-39 8E-44 294.9 29.7 294 4-316 63-437 (437)
66 3mkq_A Coatomer beta'-subunit; 100.0 1.5E-38 5E-43 311.7 36.8 285 4-319 13-302 (814)
67 1pgu_A Actin interacting prote 100.0 1.3E-37 4.5E-42 295.4 41.8 329 4-358 116-614 (615)
68 4gga_A P55CDC, cell division c 100.0 5.3E-38 1.8E-42 284.3 37.2 285 5-321 106-397 (420)
69 2oaj_A Protein SNI1; WD40 repe 100.0 8.6E-39 3E-43 313.5 33.8 200 4-236 17-245 (902)
70 3ei3_B DNA damage-binding prot 100.0 9.8E-39 3.4E-43 285.7 31.3 289 53-358 63-382 (383)
71 3f3f_A Nucleoporin SEH1; struc 100.0 2.6E-38 8.9E-43 278.6 33.5 259 56-324 4-342 (351)
72 2oaj_A Protein SNI1; WD40 repe 100.0 3.5E-38 1.2E-42 309.2 37.7 334 3-360 57-666 (902)
73 3k26_A Polycomb protein EED; W 100.0 1.1E-38 3.7E-43 283.3 30.6 289 58-357 13-365 (366)
74 1pgu_A Actin interacting prote 100.0 3.5E-38 1.2E-42 299.3 36.0 320 4-357 18-365 (615)
75 3odt_A Protein DOA1; ubiquitin 100.0 9E-38 3.1E-42 271.4 35.0 289 52-364 7-302 (313)
76 3sfz_A APAF-1, apoptotic pepti 100.0 5.8E-39 2E-43 327.9 31.4 346 4-383 840-1233(1249)
77 3dw8_B Serine/threonine-protei 100.0 2.8E-38 9.7E-43 288.5 32.5 298 3-318 27-445 (447)
78 3gre_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43 291.2 28.5 262 53-323 52-363 (437)
79 4a11_B DNA excision repair pro 100.0 8.9E-38 3E-42 281.5 33.5 330 4-357 43-404 (408)
80 3jrp_A Fusion protein of prote 100.0 1.4E-37 4.7E-42 277.5 33.8 256 56-323 4-291 (379)
81 4ggc_A P55CDC, cell division c 100.0 1E-36 3.6E-41 265.3 36.8 283 7-320 28-316 (318)
82 4e54_B DNA damage-binding prot 100.0 1.8E-38 6.1E-43 288.7 26.6 293 57-361 113-433 (435)
83 3v7d_B Cell division control p 100.0 1.3E-36 4.4E-41 278.9 39.2 277 6-323 124-425 (464)
84 3v7d_B Cell division control p 100.0 8.7E-37 3E-41 280.1 36.5 287 55-364 113-427 (464)
85 4aez_A CDC20, WD repeat-contai 100.0 5.8E-37 2E-41 275.8 33.5 296 52-364 80-386 (401)
86 2aq5_A Coronin-1A; WD40 repeat 100.0 3E-37 1E-41 277.8 30.3 292 9-320 39-343 (402)
87 1yfq_A Cell cycle arrest prote 100.0 4.3E-37 1.5E-41 270.6 29.9 282 4-317 11-322 (342)
88 3mkq_A Coatomer beta'-subunit; 100.0 6.3E-37 2.1E-41 300.1 34.0 286 55-359 5-303 (814)
89 2xyi_A Probable histone-bindin 100.0 1.9E-36 6.4E-41 274.8 34.3 300 4-319 45-410 (430)
90 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-35 5.9E-40 269.9 38.2 303 6-358 121-442 (445)
91 2pm7_B Protein transport prote 100.0 2.3E-36 7.8E-41 260.6 30.2 246 4-275 9-285 (297)
92 1p22_A F-BOX/WD-repeat protein 100.0 1E-35 3.5E-40 270.6 33.7 282 60-367 130-423 (435)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.9E-35 6.4E-40 270.0 35.2 247 61-321 100-393 (450)
94 4a11_B DNA excision repair pro 100.0 3.3E-36 1.1E-40 271.3 29.1 319 34-366 22-373 (408)
95 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-35 3.7E-40 270.5 32.2 273 4-322 133-417 (435)
96 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-37 8.7E-42 278.2 20.5 289 2-359 13-322 (588)
97 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.4E-35 8.3E-40 269.0 34.0 283 55-363 110-396 (445)
98 1yfq_A Cell cycle arrest prote 100.0 8.3E-36 2.8E-40 262.4 28.7 282 59-356 7-322 (342)
99 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-36 5E-41 279.5 24.0 246 62-319 132-428 (524)
100 3dw8_B Serine/threonine-protei 100.0 8.4E-36 2.9E-40 272.1 28.6 244 62-321 27-375 (447)
101 2aq5_A Coronin-1A; WD40 repeat 100.0 9.6E-36 3.3E-40 268.0 28.3 289 64-361 35-345 (402)
102 3bg1_A Protein SEC13 homolog; 100.0 5.4E-36 1.9E-40 260.5 25.4 245 4-274 13-292 (316)
103 3mmy_A MRNA export factor; mRN 100.0 6.5E-35 2.2E-39 259.0 32.8 289 4-318 39-345 (368)
104 3vu4_A KMHSV2; beta-propeller 100.0 4.4E-35 1.5E-39 258.9 30.3 280 58-362 14-340 (355)
105 3jro_A Fusion protein of prote 100.0 1.1E-35 3.8E-40 287.6 28.2 254 57-322 3-288 (753)
106 4gga_A P55CDC, cell division c 100.0 3.5E-34 1.2E-38 259.2 34.1 273 65-360 107-397 (420)
107 3lrv_A PRE-mRNA-splicing facto 100.0 7.1E-35 2.4E-39 256.6 26.4 267 70-357 43-332 (343)
108 4h5i_A Guanine nucleotide-exch 100.0 6.6E-35 2.3E-39 258.5 24.8 280 63-358 14-343 (365)
109 3f3f_A Nucleoporin SEH1; struc 100.0 5.7E-34 1.9E-38 250.8 30.6 260 4-282 11-344 (351)
110 3jrp_A Fusion protein of prote 100.0 9.2E-34 3.1E-38 252.7 30.7 248 4-277 11-289 (379)
111 4gq1_A NUP37; propeller, trans 100.0 1.8E-34 6.2E-39 258.5 26.0 241 68-318 94-388 (393)
112 4ggc_A P55CDC, cell division c 100.0 1.7E-32 5.8E-37 238.6 36.1 271 66-358 28-315 (318)
113 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.6E-33 1.6E-37 254.2 33.5 246 64-317 5-337 (450)
114 3mmy_A MRNA export factor; mRN 100.0 1.8E-33 6.3E-38 249.7 30.1 284 55-356 31-344 (368)
115 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-32 4.2E-37 243.2 33.2 282 4-328 19-345 (355)
116 3bws_A Protein LP49; two-domai 100.0 1.5E-32 5.1E-37 249.7 34.6 285 4-318 122-431 (433)
117 1l0q_A Surface layer protein; 100.0 1.8E-31 6.2E-36 239.2 39.8 261 34-322 11-278 (391)
118 3lrv_A PRE-mRNA-splicing facto 100.0 9E-34 3.1E-38 249.5 24.2 275 10-318 42-332 (343)
119 3bws_A Protein LP49; two-domai 100.0 7.7E-32 2.6E-36 244.9 35.3 335 4-357 60-431 (433)
120 2xyi_A Probable histone-bindin 100.0 5.1E-33 1.8E-37 252.2 26.9 261 4-277 128-412 (430)
121 2w18_A PALB2, fancn, partner a 100.0 2.6E-32 8.8E-37 231.2 28.0 287 7-317 42-355 (356)
122 2j04_A TAU60, YPL007P, hypothe 100.0 3.7E-33 1.3E-37 251.3 23.9 258 61-357 13-296 (588)
123 3jro_A Fusion protein of prote 100.0 1.3E-32 4.5E-37 266.1 27.4 248 4-277 9-287 (753)
124 1l0q_A Surface layer protein; 100.0 6.8E-30 2.3E-34 228.9 32.7 268 76-362 3-279 (391)
125 4gq1_A NUP37; propeller, trans 100.0 2E-30 7E-35 232.2 23.2 233 21-274 103-388 (393)
126 2w18_A PALB2, fancn, partner a 100.0 5.8E-30 2E-34 216.8 24.1 244 4-273 86-355 (356)
127 1nir_A Nitrite reductase; hemo 100.0 3.4E-28 1.2E-32 225.6 32.9 318 11-366 144-522 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.7E-28 9.1E-33 219.8 24.4 285 6-319 64-387 (415)
129 2ecf_A Dipeptidyl peptidase IV 100.0 1.7E-26 5.7E-31 224.0 32.5 242 65-319 110-413 (741)
130 1ri6_A Putative isomerase YBHE 100.0 3.6E-25 1.2E-29 194.4 32.8 268 33-320 13-309 (343)
131 1xfd_A DIP, dipeptidyl aminope 100.0 1.9E-26 6.6E-31 222.9 26.2 290 4-320 16-394 (723)
132 1nir_A Nitrite reductase; hemo 100.0 9.7E-26 3.3E-30 209.2 29.3 298 5-324 179-519 (543)
133 3u4y_A Uncharacterized protein 100.0 4.2E-25 1.4E-29 193.1 31.2 264 34-320 19-305 (331)
134 2ojh_A Uncharacterized protein 99.9 1.9E-26 6.4E-31 198.0 21.5 255 32-310 19-293 (297)
135 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.6E-25 1.9E-29 198.1 31.9 237 35-301 159-410 (415)
136 2ecf_A Dipeptidyl peptidase IV 99.9 3.9E-26 1.3E-30 221.4 25.2 286 63-358 36-413 (741)
137 3hfq_A Uncharacterized protein 99.9 3.6E-24 1.2E-28 188.5 34.0 270 33-319 14-317 (347)
138 3vgz_A Uncharacterized protein 99.9 1.6E-24 5.4E-29 191.1 31.7 286 5-310 41-335 (353)
139 2z3z_A Dipeptidyl aminopeptida 99.9 7.1E-25 2.4E-29 211.4 29.6 287 5-321 82-437 (706)
140 1pby_B Quinohemoprotein amine 99.9 3.8E-24 1.3E-28 187.4 28.7 265 34-322 10-313 (337)
141 1k32_A Tricorn protease; prote 99.9 1.2E-24 4.1E-29 218.0 27.5 331 4-366 52-469 (1045)
142 3vgz_A Uncharacterized protein 99.9 3.3E-23 1.1E-27 182.7 31.7 242 63-322 40-306 (353)
143 3u4y_A Uncharacterized protein 99.9 8.5E-24 2.9E-28 184.8 27.6 274 70-360 4-306 (331)
144 1ri6_A Putative isomerase YBHE 99.9 6.7E-23 2.3E-27 179.8 33.4 274 4-301 37-335 (343)
145 3scy_A Hypothetical bacterial 99.9 2.1E-22 7.3E-27 178.2 36.4 270 33-319 25-337 (361)
146 2z3z_A Dipeptidyl aminopeptida 99.9 2.3E-24 8E-29 207.7 25.1 237 64-318 82-388 (706)
147 1k32_A Tricorn protease; prote 99.9 2E-23 7E-28 209.1 30.2 278 62-360 294-639 (1045)
148 1pby_B Quinohemoprotein amine 99.9 1.8E-23 6.3E-28 183.0 24.4 269 76-363 2-315 (337)
149 1xfd_A DIP, dipeptidyl aminope 99.9 1.4E-23 4.7E-28 203.0 25.9 292 6-308 62-429 (723)
150 3o4h_A Acylamino-acid-releasin 99.9 1.3E-23 4.4E-28 198.0 24.5 268 5-317 22-313 (582)
151 3o4h_A Acylamino-acid-releasin 99.9 2.7E-23 9.1E-28 195.8 25.6 231 63-317 21-274 (582)
152 1jmx_B Amine dehydrogenase; ox 99.9 9E-23 3.1E-27 179.5 23.3 233 68-321 4-327 (349)
153 1z68_A Fibroblast activation p 99.9 1.5E-22 5.2E-27 195.5 26.5 279 7-319 18-391 (719)
154 2ojh_A Uncharacterized protein 99.9 2E-22 6.9E-27 172.8 24.1 223 81-321 18-260 (297)
155 3hfq_A Uncharacterized protein 99.9 4.3E-21 1.5E-25 168.8 32.9 258 6-280 41-324 (347)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 9.9E-23 3.4E-27 184.0 22.6 206 63-276 36-279 (434)
157 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.7E-21 9.1E-26 171.3 31.3 270 35-320 14-342 (365)
158 3scy_A Hypothetical bacterial 99.9 1.6E-20 5.5E-25 166.1 34.5 275 6-297 51-360 (361)
159 3pe7_A Oligogalacturonate lyas 99.9 3.9E-22 1.3E-26 178.2 23.1 286 10-321 41-384 (388)
160 1z68_A Fibroblast activation p 99.9 3E-22 1E-26 193.4 20.4 276 67-358 19-391 (719)
161 2oit_A Nucleoporin 214KDA; NH2 99.9 2.6E-22 8.9E-27 181.3 18.6 200 113-320 37-279 (434)
162 1jmx_B Amine dehydrogenase; ox 99.9 1.2E-20 4E-25 166.0 24.9 246 9-283 4-333 (349)
163 4a5s_A Dipeptidyl peptidase 4 99.9 8.5E-21 2.9E-25 183.5 24.1 250 64-320 17-354 (740)
164 4a5s_A Dipeptidyl peptidase 4 99.9 3.8E-20 1.3E-24 178.9 25.6 282 5-319 17-398 (740)
165 3pe7_A Oligogalacturonate lyas 99.9 6.3E-20 2.2E-24 163.9 22.7 253 57-321 24-331 (388)
166 1q7f_A NHL, brain tumor CG1071 99.9 2.8E-18 9.7E-23 146.5 31.9 247 61-319 27-280 (286)
167 3c5m_A Oligogalacturonate lyas 99.9 3.5E-20 1.2E-24 165.9 19.5 284 7-320 38-383 (396)
168 3fvz_A Peptidyl-glycine alpha- 99.9 1.2E-18 4E-23 152.0 28.2 245 63-320 23-323 (329)
169 1jof_A Carboxy-CIS,CIS-muconat 99.8 9.8E-19 3.3E-23 154.8 27.5 275 77-359 4-342 (365)
170 3azo_A Aminopeptidase; POP fam 99.8 1.3E-18 4.3E-23 166.5 28.4 288 4-318 23-366 (662)
171 3azo_A Aminopeptidase; POP fam 99.8 3.6E-19 1.2E-23 170.3 23.0 249 53-319 13-323 (662)
172 2oiz_A Aromatic amine dehydrog 99.8 2.9E-17 9.9E-22 144.8 28.5 247 34-301 30-360 (361)
173 2gop_A Trilobed protease; beta 99.8 9E-18 3.1E-22 147.5 25.0 256 64-357 15-330 (347)
174 2gop_A Trilobed protease; beta 99.8 1.2E-17 4E-22 146.8 25.4 224 64-318 59-330 (347)
175 2xdw_A Prolyl endopeptidase; a 99.8 1.8E-17 6.3E-22 159.5 28.6 244 62-321 123-416 (710)
176 3c5m_A Oligogalacturonate lyas 99.8 2.2E-18 7.5E-23 154.2 20.6 239 66-321 38-331 (396)
177 2dg1_A DRP35, lactonase; beta 99.8 1.5E-16 5E-21 139.0 31.0 271 3-309 4-300 (333)
178 3e5z_A Putative gluconolactona 99.8 9.5E-17 3.2E-21 137.8 26.1 235 58-318 22-283 (296)
179 2bkl_A Prolyl endopeptidase; m 99.8 1.5E-17 5.2E-22 159.7 23.2 244 61-321 118-399 (695)
180 1qks_A Cytochrome CD1 nitrite 99.8 1.5E-15 5.2E-20 140.6 35.6 280 10-320 159-478 (567)
181 1rwi_B Serine/threonine-protei 99.8 1.5E-16 5.3E-21 134.4 26.4 242 65-322 25-267 (270)
182 3fvz_A Peptidyl-glycine alpha- 99.8 3.3E-16 1.1E-20 136.5 28.3 254 5-275 24-322 (329)
183 2z2n_A Virginiamycin B lyase; 99.8 7E-15 2.4E-19 126.0 35.6 242 59-317 10-253 (299)
184 1q7f_A NHL, brain tumor CG1071 99.8 1.1E-15 3.7E-20 130.4 29.0 235 112-357 29-279 (286)
185 2z2n_A Virginiamycin B lyase; 99.8 4.2E-14 1.4E-18 121.1 37.9 279 5-319 15-295 (299)
186 2mad_H Methylamine dehydrogena 99.8 2.1E-14 7.3E-19 126.6 36.3 242 68-323 70-354 (373)
187 3dsm_A Uncharacterized protein 99.8 2.5E-15 8.6E-20 130.7 29.8 236 64-322 44-304 (328)
188 2oiz_A Aromatic amine dehydrog 99.7 3.2E-16 1.1E-20 138.1 21.7 233 74-320 14-335 (361)
189 1yr2_A Prolyl oligopeptidase; 99.7 5.5E-16 1.9E-20 149.9 24.8 244 62-321 161-443 (741)
190 3no2_A Uncharacterized protein 99.7 6E-15 2.1E-19 124.6 27.7 217 74-307 4-231 (276)
191 3e5z_A Putative gluconolactona 99.7 1.4E-15 4.7E-20 130.5 23.7 240 7-280 30-291 (296)
192 3dsm_A Uncharacterized protein 99.7 3.5E-15 1.2E-19 129.8 24.4 266 83-362 15-305 (328)
193 3sjl_D Methylamine dehydrogena 99.7 8.6E-15 2.9E-19 127.5 26.4 247 68-326 82-370 (386)
194 2bkl_A Prolyl endopeptidase; m 99.7 2.2E-15 7.6E-20 144.6 24.9 240 72-319 76-349 (695)
195 2dg1_A DRP35, lactonase; beta 99.7 3.2E-15 1.1E-19 130.4 23.2 239 64-318 6-262 (333)
196 2xdw_A Prolyl endopeptidase; a 99.7 8.7E-15 3E-19 140.9 28.3 250 6-277 126-416 (710)
197 2qc5_A Streptogramin B lactona 99.7 5.6E-13 1.9E-17 114.1 35.2 277 5-317 20-298 (300)
198 1rwi_B Serine/threonine-protei 99.7 1.8E-14 6.2E-19 121.6 25.0 203 62-278 65-267 (270)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1E-13 3.5E-18 119.7 29.8 246 61-320 15-300 (314)
200 1qks_A Cytochrome CD1 nitrite 99.7 1.8E-13 6.2E-18 126.7 31.8 232 73-319 165-421 (567)
201 3no2_A Uncharacterized protein 99.7 1.3E-13 4.6E-18 116.3 27.3 231 20-282 6-259 (276)
202 2qc5_A Streptogramin B lactona 99.7 1E-12 3.6E-17 112.5 33.2 241 60-317 16-258 (300)
203 3hrp_A Uncharacterized protein 99.7 3.3E-13 1.1E-17 120.6 30.0 239 64-317 131-408 (409)
204 1yr2_A Prolyl oligopeptidase; 99.6 5.9E-14 2E-18 135.7 25.8 240 72-319 115-393 (741)
205 3g4e_A Regucalcin; six bladed 99.6 6.8E-13 2.3E-17 113.6 29.1 231 59-308 8-261 (297)
206 3c75_H MADH, methylamine dehyd 99.6 7.2E-14 2.5E-18 123.9 23.2 244 68-323 122-406 (426)
207 3iuj_A Prolyl endopeptidase; h 99.6 1.2E-13 4.2E-18 132.3 22.4 242 61-320 126-406 (693)
208 2mad_H Methylamine dehydrogena 99.6 4.8E-12 1.7E-16 111.5 30.6 274 71-364 28-356 (373)
209 2ece_A 462AA long hypothetical 99.6 3.4E-12 1.2E-16 111.8 28.1 289 17-307 25-399 (462)
210 2ghs_A AGR_C_1268P; regucalcin 99.6 1.3E-11 4.6E-16 107.0 29.9 224 64-309 49-292 (326)
211 1xip_A Nucleoporin NUP159; bet 99.6 1.6E-13 5.4E-18 120.0 16.8 175 113-307 38-232 (388)
212 1xip_A Nucleoporin NUP159; bet 99.5 1.5E-13 5.2E-18 120.1 16.1 177 65-262 39-231 (388)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 4.1E-12 1.4E-16 109.6 24.7 203 62-276 69-300 (314)
214 3sjl_D Methylamine dehydrogena 99.5 3E-12 1E-16 111.5 23.1 279 69-366 38-371 (386)
215 3dr2_A Exported gluconolactona 99.5 5E-12 1.7E-16 108.7 24.1 229 59-310 40-298 (305)
216 2qe8_A Uncharacterized protein 99.5 4.3E-12 1.5E-16 111.0 23.1 244 64-313 17-315 (343)
217 3c75_H MADH, methylamine dehyd 99.5 3E-12 1E-16 113.5 22.0 274 73-364 82-408 (426)
218 3g4e_A Regucalcin; six bladed 99.5 1.9E-11 6.5E-16 104.6 23.7 228 9-264 17-261 (297)
219 3hrp_A Uncharacterized protein 99.5 8.3E-11 2.9E-15 105.1 28.3 238 6-273 132-408 (409)
220 3dr2_A Exported gluconolactona 99.5 2.2E-11 7.5E-16 104.7 22.8 232 7-272 47-303 (305)
221 1mda_H Methylamine dehydrogena 99.4 1.3E-11 4.5E-16 107.7 19.5 235 68-323 69-350 (368)
222 2hz6_A Endoplasmic reticulum t 99.4 5.8E-15 2E-19 130.3 -3.4 266 74-366 8-287 (369)
223 3iuj_A Prolyl endopeptidase; h 99.4 7.5E-11 2.6E-15 113.0 23.8 251 5-279 129-409 (693)
224 1yiq_A Quinohemoprotein alcoho 99.4 3.2E-11 1.1E-15 114.9 20.5 294 75-377 70-524 (689)
225 2ghs_A AGR_C_1268P; regucalcin 99.4 3.5E-10 1.2E-14 98.1 25.1 226 8-265 52-292 (326)
226 1mda_H Methylamine dehydrogena 99.3 5.3E-11 1.8E-15 103.8 17.5 255 86-366 47-354 (368)
227 2hz6_A Endoplasmic reticulum t 99.3 1.2E-13 4.2E-18 121.8 0.7 184 123-322 8-195 (369)
228 2qe8_A Uncharacterized protein 99.3 4.8E-10 1.6E-14 98.0 22.6 250 6-271 18-317 (343)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.3 3.1E-09 1.1E-13 94.0 28.1 274 74-365 52-344 (376)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.3 7.9E-09 2.7E-13 91.4 29.1 257 74-355 102-375 (376)
231 2ece_A 462AA long hypothetical 99.3 3.7E-09 1.3E-13 92.8 25.5 190 65-263 139-399 (462)
232 1kb0_A Quinohemoprotein alcoho 99.3 9.6E-10 3.3E-14 104.6 23.8 293 75-378 77-527 (677)
233 1kb0_A Quinohemoprotein alcoho 99.3 5.9E-09 2E-13 99.2 28.7 240 74-323 127-511 (677)
234 2iwa_A Glutamine cyclotransfer 99.3 4.9E-09 1.7E-13 86.5 24.3 197 114-320 22-238 (266)
235 1yiq_A Quinohemoprotein alcoho 99.3 2.5E-09 8.7E-14 101.9 25.5 223 84-308 182-538 (689)
236 1fwx_A Nitrous oxide reductase 99.3 8E-11 2.7E-15 106.9 14.3 219 74-308 100-407 (595)
237 1npe_A Nidogen, entactin; glyc 99.2 2.2E-08 7.4E-13 84.0 27.9 222 64-301 36-263 (267)
238 3hxj_A Pyrrolo-quinoline quino 99.2 1.7E-09 5.9E-14 93.7 20.7 219 75-320 107-325 (330)
239 3hxj_A Pyrrolo-quinoline quino 99.2 4.1E-10 1.4E-14 97.7 14.7 259 69-362 25-287 (330)
240 2fp8_A Strictosidine synthase; 99.1 1.2E-07 4.3E-12 81.8 27.1 250 59-319 14-313 (322)
241 2iwa_A Glutamine cyclotransfer 99.1 2E-08 6.8E-13 82.9 20.6 196 66-277 23-239 (266)
242 1fwx_A Nitrous oxide reductase 99.1 8.7E-09 3E-13 93.7 20.0 186 123-319 100-361 (595)
243 3nol_A Glutamine cyclotransfer 99.1 3.5E-08 1.2E-12 80.4 21.3 183 114-309 44-245 (262)
244 1npe_A Nidogen, entactin; glyc 99.1 2.9E-07 9.8E-12 77.2 27.8 230 76-321 2-240 (267)
245 3nok_A Glutaminyl cyclase; bet 99.1 4.5E-08 1.5E-12 79.8 20.6 182 113-308 55-254 (268)
246 4a2l_A BT_4663, two-component 99.1 1.4E-06 4.9E-11 84.8 35.1 243 63-319 214-480 (795)
247 1kv9_A Type II quinohemoprotei 99.1 1.9E-08 6.5E-13 95.6 21.2 294 75-377 66-507 (668)
248 3mbr_X Glutamine cyclotransfer 99.0 2.2E-07 7.6E-12 75.0 23.5 194 112-318 20-232 (243)
249 2p4o_A Hypothetical protein; p 99.0 7.2E-07 2.5E-11 76.3 27.2 228 64-310 32-279 (306)
250 3nol_A Glutamine cyclotransfer 99.0 1.1E-07 3.7E-12 77.6 19.1 185 62-264 39-244 (262)
251 1w6s_A Methanol dehydrogenase 99.0 5.6E-07 1.9E-11 83.8 26.5 294 75-377 62-522 (599)
252 2ad6_A Methanol dehydrogenase 99.0 1.9E-07 6.6E-12 86.9 23.5 296 75-377 62-513 (571)
253 4a2l_A BT_4663, two-component 99.0 1.3E-05 4.3E-10 78.2 37.1 244 63-319 262-526 (795)
254 1kv9_A Type II quinohemoprotei 98.9 2.3E-07 7.9E-12 88.2 23.2 238 75-323 117-492 (668)
255 1k3i_A Galactose oxidase precu 98.9 1E-06 3.5E-11 83.8 26.1 284 9-308 190-530 (656)
256 2ad6_A Methanol dehydrogenase 98.9 9.9E-07 3.4E-11 82.1 24.9 237 75-322 115-497 (571)
257 3tc9_A Hypothetical hydrolase; 98.9 2.3E-06 7.7E-11 76.8 25.9 239 65-318 138-429 (430)
258 2xe4_A Oligopeptidase B; hydro 98.9 4.2E-07 1.4E-11 87.7 22.5 199 114-318 175-397 (751)
259 2xe4_A Oligopeptidase B; hydro 98.8 6.1E-07 2.1E-11 86.6 22.8 195 65-273 175-398 (751)
260 1flg_A Protein (quinoprotein e 98.8 2.1E-06 7.2E-11 80.0 25.5 296 76-378 69-536 (582)
261 3v9f_A Two-component system se 98.8 2.1E-05 7.1E-10 76.5 33.3 242 64-319 211-478 (781)
262 3v64_C Agrin; beta propeller, 98.8 2.1E-05 7.2E-10 68.5 30.1 207 63-282 72-282 (349)
263 1ijq_A LDL receptor, low-densi 98.8 3.2E-05 1.1E-09 66.3 30.7 230 77-321 3-240 (316)
264 3v64_C Agrin; beta propeller, 98.8 3.1E-05 1E-09 67.4 30.8 236 64-317 34-273 (349)
265 4hw6_A Hypothetical protein, I 98.8 3.9E-06 1.3E-10 75.2 25.2 241 64-318 139-432 (433)
266 3mbr_X Glutamine cyclotransfer 98.8 2.2E-06 7.5E-11 69.3 21.0 182 65-264 22-223 (243)
267 3nok_A Glutaminyl cyclase; bet 98.8 7.1E-07 2.4E-11 72.7 18.3 179 66-263 57-253 (268)
268 2fp8_A Strictosidine synthase; 98.8 1.4E-06 4.8E-11 75.1 21.4 184 114-308 20-248 (322)
269 3v65_B Low-density lipoprotein 98.8 2.3E-05 8E-10 69.2 29.2 207 63-282 115-325 (386)
270 3qqz_A Putative uncharacterize 98.8 1.4E-05 4.8E-10 65.5 25.3 202 59-273 22-251 (255)
271 3v65_B Low-density lipoprotein 98.7 2.2E-05 7.5E-10 69.4 28.0 234 66-317 79-316 (386)
272 1w6s_A Methanol dehydrogenase 98.7 3.2E-06 1.1E-10 78.8 22.7 244 69-322 111-506 (599)
273 3v9f_A Two-component system se 98.7 2.6E-05 8.8E-10 75.9 30.0 243 63-318 312-567 (781)
274 1k3i_A Galactose oxidase precu 98.7 2.4E-06 8.3E-11 81.2 22.4 247 67-319 189-497 (656)
275 2p4o_A Hypothetical protein; p 98.7 6.8E-06 2.3E-10 70.2 23.0 194 113-318 32-241 (306)
276 2xbg_A YCF48-like protein; pho 98.7 0.00011 3.9E-09 63.2 34.4 278 4-316 35-319 (327)
277 3qqz_A Putative uncharacterize 98.7 3.1E-05 1.1E-09 63.5 24.7 204 5-231 27-251 (255)
278 1ijq_A LDL receptor, low-densi 98.6 0.00015 5.1E-09 62.1 30.5 208 63-282 29-245 (316)
279 1flg_A Protein (quinoprotein e 98.6 2.1E-05 7.2E-10 73.3 25.8 242 75-322 117-519 (582)
280 3p5b_L Low density lipoprotein 98.6 0.00013 4.6E-09 64.6 29.5 232 77-322 85-323 (400)
281 3amr_A 3-phytase; beta-propell 98.6 2.7E-05 9.3E-10 66.3 22.1 189 123-318 39-262 (355)
282 3sov_A LRP-6, low-density lipo 98.5 0.0001 3.4E-09 63.2 24.7 207 64-282 35-245 (318)
283 3kya_A Putative phosphatase; s 98.5 0.00012 4.2E-09 65.9 25.6 246 65-320 140-476 (496)
284 3p5b_L Low density lipoprotein 98.5 0.00053 1.8E-08 60.8 32.0 209 62-282 110-327 (400)
285 3sov_A LRP-6, low-density lipo 98.5 8.5E-05 2.9E-09 63.6 23.1 227 126-360 6-240 (318)
286 2p9w_A MAL S 1 allergenic prot 98.5 0.00034 1.2E-08 59.1 25.3 196 114-316 14-262 (334)
287 2ism_A Putative oxidoreductase 98.4 0.00045 1.5E-08 60.1 26.1 232 63-307 30-333 (352)
288 3m0c_C LDL receptor, low-densi 98.4 0.00065 2.2E-08 65.4 28.8 227 77-317 397-630 (791)
289 3amr_A 3-phytase; beta-propell 98.3 0.00024 8.2E-09 60.5 22.0 191 74-282 39-271 (355)
290 3a9g_A Putative uncharacterize 98.3 0.0012 4.1E-08 57.4 27.9 234 63-307 28-330 (354)
291 2xbg_A YCF48-like protein; pho 98.3 0.0016 5.3E-08 56.0 32.3 273 63-355 35-319 (327)
292 3tc9_A Hypothetical hydrolase; 98.2 6.3E-05 2.1E-09 67.4 17.6 155 156-319 138-301 (430)
293 2g8s_A Glucose/sorbosone dehyd 98.2 0.0022 7.6E-08 55.7 28.6 245 64-318 18-351 (353)
294 3m0c_C LDL receptor, low-densi 98.2 0.002 6.7E-08 62.1 27.7 187 126-320 397-590 (791)
295 4hw6_A Hypothetical protein, I 98.2 0.00049 1.7E-08 61.6 21.9 196 114-317 140-372 (433)
296 1n7d_A LDL receptor, low-densi 98.2 4.6E-05 1.6E-09 72.7 15.6 207 64-282 406-621 (699)
297 3s94_A LRP-6, low-density lipo 98.1 0.0015 5.1E-08 61.3 25.0 205 63-279 39-247 (619)
298 2p9w_A MAL S 1 allergenic prot 98.1 0.0014 4.9E-08 55.3 22.1 208 58-275 7-265 (334)
299 1n7d_A LDL receptor, low-densi 98.1 2.9E-05 1E-09 74.0 13.4 200 113-318 406-613 (699)
300 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0069 2.4E-07 56.9 28.0 225 126-360 8-239 (628)
301 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0086 2.9E-07 56.3 28.9 225 77-318 8-236 (628)
302 3sre_A PON1, serum paraoxonase 98.0 0.0013 4.5E-08 56.7 20.8 202 64-274 50-297 (355)
303 2xzh_A Clathrin heavy chain 1; 98.0 0.0044 1.5E-07 52.0 28.9 238 68-320 71-333 (365)
304 3s94_A LRP-6, low-density lipo 98.0 0.0044 1.5E-07 58.2 24.5 223 132-360 16-245 (619)
305 3s25_A Hypothetical 7-bladed b 97.9 0.0088 3E-07 50.5 23.4 177 117-319 57-253 (302)
306 3sre_A PON1, serum paraoxonase 97.8 0.013 4.3E-07 50.6 25.8 184 115-309 52-287 (355)
307 2ism_A Putative oxidoreductase 97.8 0.0027 9.3E-08 55.1 19.0 191 63-263 74-333 (352)
308 3ott_A Two-component system se 97.8 0.032 1.1E-06 54.0 27.9 230 63-318 21-259 (758)
309 2vpj_A Kelch-like protein 12; 97.8 0.0097 3.3E-07 50.2 21.4 184 123-318 62-277 (301)
310 2vpj_A Kelch-like protein 12; 97.7 0.0064 2.2E-07 51.4 19.5 190 74-278 62-281 (301)
311 3ei3_A DNA damage-binding prot 97.7 0.056 1.9E-06 54.5 34.8 282 63-361 553-916 (1158)
312 3ii7_A Kelch-like protein 7; p 97.7 0.011 3.7E-07 50.1 20.8 188 74-278 55-275 (306)
313 3das_A Putative oxidoreductase 97.7 0.023 7.9E-07 48.8 28.4 238 62-307 30-326 (347)
314 1bpo_A Protein (clathrin); cla 97.6 0.03 1E-06 49.0 28.1 238 68-320 70-332 (494)
315 3kya_A Putative phosphatase; s 97.6 0.0041 1.4E-07 56.1 17.1 158 156-319 140-341 (496)
316 1cru_A Protein (soluble quinop 97.6 0.041 1.4E-06 49.5 28.4 110 63-173 26-162 (454)
317 3ii7_A Kelch-like protein 7; p 97.6 0.014 4.7E-07 49.4 19.6 223 77-318 14-271 (306)
318 2xn4_A Kelch-like protein 2; s 97.5 0.021 7.1E-07 48.2 20.3 184 123-318 61-275 (302)
319 3ei3_A DNA damage-binding prot 97.5 0.11 3.7E-06 52.5 37.9 297 3-323 552-917 (1158)
320 2xn4_A Kelch-like protein 2; s 97.4 0.04 1.4E-06 46.4 21.0 189 74-279 61-280 (302)
321 1tl2_A L10, protein (tachylect 97.4 0.016 5.6E-07 45.6 16.4 180 124-320 4-209 (236)
322 3pbp_A Nucleoporin NUP82; beta 97.4 0.023 8E-07 49.6 18.6 145 163-315 29-208 (452)
323 3pbp_A Nucleoporin NUP82; beta 97.4 0.023 7.8E-07 49.6 18.5 116 64-181 66-208 (452)
324 1zgk_A Kelch-like ECH-associat 97.3 0.053 1.8E-06 45.8 19.9 217 74-309 24-272 (308)
325 4asc_A Kelch repeat and BTB do 97.2 0.052 1.8E-06 46.0 19.2 64 123-188 98-177 (315)
326 2g8s_A Glucose/sorbosone dehyd 97.2 0.092 3.1E-06 45.4 23.8 59 199-262 272-340 (353)
327 3ott_A Two-component system se 97.1 0.24 8.3E-06 47.8 26.6 233 64-314 373-622 (758)
328 1zgk_A Kelch-like ECH-associat 97.1 0.11 3.8E-06 43.8 21.1 189 74-279 70-291 (308)
329 4asc_A Kelch repeat and BTB do 97.0 0.13 4.4E-06 43.6 23.9 212 78-309 8-253 (315)
330 2woz_A Kelch repeat and BTB do 97.0 0.14 4.7E-06 43.4 21.3 148 123-279 109-291 (318)
331 2uvk_A YJHT; unknown function, 97.0 0.071 2.4E-06 46.1 17.7 96 74-175 19-128 (357)
332 3s25_A Hypothetical 7-bladed b 96.9 0.14 4.9E-06 43.1 24.7 202 69-307 58-280 (302)
333 3das_A Putative oxidoreductase 96.9 0.13 4.3E-06 44.2 18.3 163 154-320 31-234 (347)
334 3a9g_A Putative uncharacterize 96.9 0.18 6.1E-06 43.6 23.6 197 114-319 30-296 (354)
335 1xi4_A Clathrin heavy chain; a 96.9 0.18 6.1E-06 51.2 21.2 236 68-318 70-330 (1630)
336 1tl2_A L10, protein (tachylect 96.9 0.011 3.8E-07 46.6 10.3 102 199-312 42-156 (236)
337 2woz_A Kelch repeat and BTB do 96.9 0.17 5.9E-06 42.9 20.3 178 120-309 53-263 (318)
338 2xzh_A Clathrin heavy chain 1; 96.8 0.2 6.7E-06 42.2 26.0 225 35-278 87-335 (365)
339 2be1_A Serine/threonine-protei 96.7 0.0096 3.3E-07 50.9 9.4 189 167-363 11-236 (339)
340 2wg3_C Hedgehog-interacting pr 96.6 0.37 1.3E-05 43.3 26.0 111 64-174 14-158 (463)
341 2zwa_A Leucine carboxyl methyl 96.6 0.29 9.8E-06 46.7 20.0 202 73-279 396-639 (695)
342 2be1_A Serine/threonine-protei 96.4 0.0079 2.7E-07 51.4 7.3 146 125-277 11-185 (339)
343 1bpo_A Protein (clathrin); cla 96.3 0.49 1.7E-05 41.6 26.5 225 35-278 86-334 (494)
344 1cru_A Protein (soluble quinop 96.1 0.73 2.5E-05 41.3 22.0 164 155-320 27-260 (454)
345 2uvk_A YJHT; unknown function, 96.0 0.69 2.3E-05 39.8 18.5 64 123-188 19-98 (357)
346 3sbq_A Nitrous-oxide reductase 95.6 1.3 4.3E-05 40.4 19.1 224 127-359 73-409 (638)
347 2zwa_A Leucine carboxyl methyl 95.5 1.4 4.7E-05 42.0 18.9 192 122-319 396-635 (695)
348 3sbq_A Nitrous-oxide reductase 94.5 2.7 9.4E-05 38.3 22.5 240 78-319 73-408 (638)
349 3qhy_B Beta-lactamase inhibito 93.4 2.9 9.8E-05 34.6 18.4 226 65-323 25-250 (282)
350 1xi4_A Clathrin heavy chain; a 93.1 2.5 8.6E-05 43.3 14.9 172 5-187 151-333 (1630)
351 3qhy_B Beta-lactamase inhibito 92.7 3.7 0.00013 33.9 16.4 225 113-362 24-250 (282)
352 2wg3_C Hedgehog-interacting pr 90.0 10 0.00035 33.9 23.6 19 245-263 336-354 (463)
353 4hvt_A Ritya.17583.B, post-pro 90.0 14 0.00046 35.3 21.1 198 116-318 132-380 (711)
354 3q6k_A 43.2 kDa salivary prote 89.6 9.6 0.00033 33.0 18.4 168 135-306 124-341 (381)
355 3b7f_A Glycosyl hydrolase, BNR 87.0 14 0.0005 31.9 24.1 243 63-313 54-366 (394)
356 4gq2_M Nucleoporin NUP120; bet 85.3 31 0.0011 34.2 22.3 38 156-193 237-274 (950)
357 3kci_A Probable E3 ubiquitin-p 84.2 20 0.00069 31.1 25.0 186 124-319 62-293 (389)
358 4gq2_M Nucleoporin NUP120; bet 82.2 42 0.0014 33.3 15.7 38 245-282 236-273 (950)
359 4fhn_B Nucleoporin NUP120; pro 81.7 46 0.0016 33.8 15.9 38 156-193 239-276 (1139)
360 3zwu_A Alkaline phosphatase PH 81.1 5.2 0.00018 37.0 8.0 59 247-306 478-548 (592)
361 3uc1_A DNA gyrase subunit A; D 79.8 27 0.00091 29.5 20.4 120 63-184 94-227 (327)
362 3q6k_A 43.2 kDa salivary prote 78.0 33 0.0011 29.6 22.4 140 177-319 124-306 (381)
363 1suu_A DNA gyrase subunit A; t 76.5 33 0.0011 28.7 28.0 198 73-275 6-231 (312)
364 4a9v_A PHOX; hydrolase, beta-p 76.0 13 0.00044 34.1 8.8 61 245-306 476-548 (592)
365 3no0_A DNA gyrase subunit A; D 75.4 32 0.0011 28.1 18.7 119 63-184 67-195 (276)
366 3b7f_A Glycosyl hydrolase, BNR 74.5 41 0.0014 29.0 26.3 217 76-306 23-296 (394)
367 3zwu_A Alkaline phosphatase PH 73.7 14 0.00048 34.1 8.7 58 156-213 477-546 (592)
368 1sqj_A OXG-RCBH, oligoxylogluc 73.2 69 0.0024 30.9 22.9 162 3-175 13-190 (789)
369 3l6v_A GYRA, DNA gyrase subuni 70.9 50 0.0017 28.4 24.8 242 72-318 4-315 (370)
370 3no0_A DNA gyrase subunit A; D 68.5 47 0.0016 27.1 22.6 197 64-275 24-246 (276)
371 4fhn_B Nucleoporin NUP120; pro 67.9 19 0.00063 36.6 8.9 36 114-149 239-274 (1139)
372 3kci_A Probable E3 ubiquitin-p 67.7 60 0.0021 28.0 28.9 233 76-321 63-347 (389)
373 4a9v_A PHOX; hydrolase, beta-p 66.9 33 0.0011 31.5 9.3 58 156-213 477-546 (592)
374 3uc1_A DNA gyrase subunit A; D 66.0 59 0.002 27.4 23.8 237 76-318 4-278 (327)
375 3f7f_A Nucleoporin NUP120; nuc 61.5 50 0.0017 31.3 9.6 34 114-149 223-256 (729)
376 1wp5_A Topoisomerase IV; broke 60.7 75 0.0026 26.7 27.3 236 73-318 3-276 (323)
377 3f7f_A Nucleoporin NUP120; nuc 58.1 1.3E+02 0.0044 28.6 14.2 36 157-194 224-259 (729)
378 4hvt_A Ritya.17583.B, post-pro 57.1 1.3E+02 0.0046 28.5 24.2 179 85-274 216-429 (711)
379 1zi0_A DNA gyrase subunit A; b 57.0 84 0.0029 26.1 27.1 239 73-318 1-276 (307)
380 2cn3_A Xyloglucanase, beta-1,4 56.1 1.4E+02 0.0048 28.4 24.7 117 5-132 23-152 (737)
381 4gz8_A Semaphorin-3A; multi-do 49.5 1.2E+02 0.0042 28.5 10.2 68 247-314 414-495 (667)
382 1q47_A Semaphorin 3A; beta pro 45.3 96 0.0033 27.9 8.6 69 246-314 405-487 (495)
383 1zi0_A DNA gyrase subunit A; b 44.6 1.3E+02 0.0046 24.8 25.4 205 65-275 43-277 (307)
384 1suu_A DNA gyrase subunit A; t 44.3 1.4E+02 0.0047 24.9 25.3 168 59-233 43-231 (312)
385 1wp5_A Topoisomerase IV; broke 42.2 1.5E+02 0.0052 24.8 25.3 205 64-275 39-277 (323)
386 1q47_A Semaphorin 3A; beta pro 37.1 88 0.003 28.2 7.0 74 65-138 405-487 (495)
387 3al9_A Plexin-A2; beta-propell 35.7 82 0.0028 28.8 6.7 68 247-314 402-476 (539)
388 3mez_B Mannose-specific lectin 35.2 1E+02 0.0036 20.9 10.6 10 201-210 59-68 (113)
389 3al9_A Plexin-A2; beta-propell 32.3 1.5E+02 0.0051 27.0 7.8 73 65-138 401-476 (539)
390 4gz8_A Semaphorin-3A; multi-do 31.3 1.5E+02 0.0053 27.8 7.8 62 77-138 431-495 (667)
391 2zux_A YESW protein; beta-prop 28.0 3.6E+02 0.012 24.8 22.3 163 111-282 177-407 (591)
392 2zux_A YESW protein; beta-prop 24.7 4.1E+02 0.014 24.4 16.2 90 157-255 328-424 (591)
393 3nvq_A Semaphorin-7A; beta-pro 23.0 2.6E+02 0.0087 25.9 7.5 57 258-314 382-444 (590)
394 1sqj_A OXG-RCBH, oligoxylogluc 21.5 5.5E+02 0.019 24.7 23.3 149 112-265 14-190 (789)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-47 Score=334.67 Aligned_cols=288 Identities=17% Similarity=0.191 Sum_probs=252.2
Q ss_pred CceeeeecCCCCCc-ceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEe
Q 016257 4 GGTVTCGSWIKRPE-NVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (392)
Q Consensus 4 ~~~v~~~~w~~~~~-~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 82 (392)
.++|++++|+|+.. .-.++++|+. |+.+++|.++.. .......+.+|...|.+++|+|++.++++++
T Consensus 32 ~~~V~~v~~~~~~~~~~~~l~tgs~------D~~v~vW~~~~~------~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 32 DDAIWSVAWGTNKKENSETVVTGSL------DDLVKVWKWRDE------RLDLQWSLEGHQLGVVSVDISHTLPIAASSS 99 (321)
T ss_dssp SSCEEEEEEC-------CEEEEEET------TSCEEEEEEETT------EEEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred CCcEEEEEEecCCCCCCCEEEEEcC------CCCEEEEECCCC------CeeeeeeeccCCCCEEEEEECCCCCEEEEEe
Confidence 46899999998632 1245666655 778999998732 1234456899999999999999999999999
Q ss_pred CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEe
Q 016257 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~ 162 (392)
.|++|++||+.+++....+.. +...+.+++|+|++++|++++.|+.|++|++++++....+..+...|.+++|
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~~-------~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~ 172 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSIDA-------GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY 172 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEEC-------CTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE
T ss_pred CCCcEEEEECCCCCEEEEEeC-------CCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE
Confidence 999999999988875544432 4567889999999999999999999999999999988877778789999999
Q ss_pred cCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc
Q 016257 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (392)
Q Consensus 163 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~ 242 (392)
+|++++|++++.|+.|++||+++++.+..+..+. ..|.+++|+|++.. +++++.|+.|++||+++++....+..
T Consensus 173 spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~spd~~~-----l~s~s~dg~i~iwd~~~~~~~~~~~~ 246 (321)
T 3ow8_A 173 SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA-MPIRSLTFSPDSQL-----LVTASDDGYIKIYDVQHANLAGTLSG 246 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SCCCEEEECTTSCE-----EEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC-CceeEEEEcCCCCE-----EEEEcCCCeEEEEECCCcceeEEEcC
Confidence 9999999999999999999999999988887654 47999999999997 89999999999999999999989999
Q ss_pred cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
|...|.+++|+|++++|++++.|+.|++||+++++.+..+ ..| ...|.+++|+|++++|++++.||.|++|+..
T Consensus 247 h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~h-~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 247 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF-FDH-QDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCC-SSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE-cCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999988877 578 8999999999999999999999999999964
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-47 Score=346.04 Aligned_cols=288 Identities=13% Similarity=0.109 Sum_probs=251.8
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|+|++|+|++ .++++|+. |+.|++|+++ .......+.+|.+.|.+++|+|++++|++|+.
T Consensus 108 ~~~V~~~~~~p~~---~~l~s~s~------Dg~i~vwd~~--------~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~ 170 (410)
T 1vyh_C 108 RSPVTRVIFHPVF---SVMVSASE------DATIKVWDYE--------TGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170 (410)
T ss_dssp SSCEEEEEECSSS---SEEEEEES------SSCEEEEETT--------TCCCCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEEEcCCC---CEEEEEeC------CCeEEEEECC--------CCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC
Confidence 4689999999987 45666555 6779999987 33445678999999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|++|++||+.+.+....+. .|...|.+++|+|++++|++|+.|++|++||++++..+..+..|...|.++.|+
T Consensus 171 D~~i~iwd~~~~~~~~~~~-------~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 171 DMTIKLWDFQGFECIRTMH-------GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243 (410)
T ss_dssp TSCCCEEETTSSCEEECCC-------CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CCeEEEEeCCCCceeEEEc-------CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEEC
Confidence 9999999998766443332 377899999999999999999999999999999999988888888899999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcce---------------EEEEEEeCCccEEEE
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF---------------LFCTVQRGDKALLAV 228 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---------------~~~~~~~~~d~~i~v 228 (392)
|++++|++++.|++|++||++++++...+..+. ..|.+++|+|++.... -..+++++.|+.|++
T Consensus 244 ~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHR-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeeEecCCC-ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 999999999999999999999999888887654 4799999999732100 001789999999999
Q ss_pred EeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeC
Q 016257 229 YDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASK 308 (392)
Q Consensus 229 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 308 (392)
||+++++++..+..|...|++++|+|++++|++|+.|+.|++||+++++....+ .+| ...|++++|+|++.+|++|+.
T Consensus 323 wd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~-~~h-~~~v~~l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL-NAH-EHFVTSLDFHKTAPYVVTGSV 400 (410)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE-ECC-SSCEEEEEECSSSSCEEEEET
T ss_pred EECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE-cCC-CCcEEEEEEcCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999998887776 578 889999999999999999999
Q ss_pred CCeEEEEEee
Q 016257 309 EWGAMITKLT 318 (392)
Q Consensus 309 dg~i~iw~~~ 318 (392)
||.|++|+++
T Consensus 401 D~~i~vW~~r 410 (410)
T 1vyh_C 401 DQTVKVWECR 410 (410)
T ss_dssp TSEEEEEC--
T ss_pred CCcEEEEeCC
Confidence 9999999863
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-46 Score=355.60 Aligned_cols=331 Identities=17% Similarity=0.260 Sum_probs=257.2
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
..+|++++|+|+++. .+++|+. |+.+++|+.. .......+.+|.+.|.+++|+|++++|++++.
T Consensus 147 ~~~v~~v~f~p~~~~--~l~s~s~------D~~v~lwd~~--------~~~~~~~l~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPF--RIISGSD------DNTVAIFEGP--------PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp SSCEEEEEECSSSSC--EEEEEET------TSCEEEEETT--------TBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCceEEEECCCCCe--EEEEEeC------CCeEEEEECC--------CCeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence 457999999998753 3554444 7779999854 33455678999999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeec--------------
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-------------- 149 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------------- 149 (392)
|++|++||+.+++....+.........|.+.|.+++|+|++++|++++.|++|++||+++++....
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 999999999887655444222222335889999999999999999999999999999987765322
Q ss_pred -----------------------------ccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEec------
Q 016257 150 -----------------------------EPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR------ 194 (392)
Q Consensus 150 -----------------------------~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~------ 194 (392)
+.+|...|.+++|+|++++|++++.|++|++||+++++....+..
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v 370 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 370 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCE
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceE
Confidence 235667899999999999999999999999999987644322100
Q ss_pred ---------------------------------------------------------------------------CCCcc
Q 016257 195 ---------------------------------------------------------------------------NSDEK 199 (392)
Q Consensus 195 ---------------------------------------------------------------------------~~~~~ 199 (392)
.+...
T Consensus 371 ~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~ 450 (611)
T 1nr0_A 371 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYN 450 (611)
T ss_dssp EEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSC
T ss_pred EEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCC
Confidence 01124
Q ss_pred eEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee--eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCC-c
Q 016257 200 IELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK-M 276 (392)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~ 276 (392)
+.+++|+|+++. +++++.|+.|++||+..+.. ... ..|...|++++|+|+|++|++++.|++|++||+.+ +
T Consensus 451 v~~va~spdg~~-----lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~ 524 (611)
T 1nr0_A 451 SSCVALSNDKQF-----VAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF 524 (611)
T ss_dssp EEEEEECTTSCE-----EEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT
T ss_pred ceEEEEeCCCCE-----EEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC
Confidence 678899999987 89999999999999987643 233 67889999999999999999999999999999988 6
Q ss_pred eeeee-eeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcccc--ce--e-eeeeeeeeeeeceEEEEeeecce
Q 016257 277 EINHW-SKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWK--EW--Q-IYSLLLALFLASAVVFYIFFENS 350 (392)
Q Consensus 277 ~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~--~-~~~~~~~~~~~~~~~~~~~~d~~ 350 (392)
+.... ....| ...|.+++|+|||++|++|+.|++|++|++..+.... .. + ........+...+.+++++.|++
T Consensus 525 ~~~~~~~~~~H-~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~l~s~~~D~~ 603 (611)
T 1nr0_A 525 ELAHTNSWTFH-TAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSN 603 (611)
T ss_dssp EESCCCCCCCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSC
T ss_pred ceeeeeeeeec-ccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCEEEEecCCCC
Confidence 65544 22348 8999999999999999999999999999997654211 10 0 01111111223334888899999
Q ss_pred eeeeccc
Q 016257 351 DSFWNFP 357 (392)
Q Consensus 351 i~~W~~~ 357 (392)
|++|+++
T Consensus 604 i~lW~~~ 610 (611)
T 1nr0_A 604 IKFWNVP 610 (611)
T ss_dssp EEEEECC
T ss_pred EEEEecc
Confidence 9999974
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-46 Score=335.55 Aligned_cols=286 Identities=15% Similarity=0.209 Sum_probs=249.2
Q ss_pred EEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCc
Q 016257 56 TYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (392)
Q Consensus 56 ~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (392)
...+.+|.++|++++|+|++++|++|+.|++|++||+.+++....+. .|...|.+++|+|++++|++|+.|++
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~-------~h~~~V~~v~~~~~~~~l~sgs~D~~ 173 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-------GHTDSVQDISFDHSGKLLASCSADMT 173 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC-------CCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-------ccCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 45688999999999999999999999999999999998887554443 37789999999999999999999999
Q ss_pred EEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 136 LRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 136 i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
|++||+.+++.+..+..|...|.+++|+|++++|++++.|++|++||+++++++..+..+. ..+.++.++|++..
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~g~~---- 248 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-EWVRMVRPNQDGTL---- 248 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSE----
T ss_pred EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC-ccEEEEEECCCCCE----
Confidence 9999999999988888888899999999999999999999999999999999998887665 47999999999997
Q ss_pred EEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCC--------------------CCEEEEEeCCCcEEEEecCC
Q 016257 216 CTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLD--------------------GKYLAMGSKDGDICVVDVKK 275 (392)
Q Consensus 216 ~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~--------------------~~~l~~~~~dg~i~iwd~~~ 275 (392)
+++++.|+.|++||+++++....+..|...|.+++|+|+ +.+|++|+.|+.|++||+++
T Consensus 249 -l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 249 -IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp -EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred -EEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 799999999999999999998899999999999999996 67999999999999999999
Q ss_pred ceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee---eeeeeeeeeeceEEEEeeecceee
Q 016257 276 MEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI---YSLLLALFLASAVVFYIFFENSDS 352 (392)
Q Consensus 276 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~i~ 352 (392)
++.+..+ .+| ...|++++|+|++++|++|+.||.|++|++........... .............+++++.|+.|+
T Consensus 328 ~~~~~~~-~~h-~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~ 405 (410)
T 1vyh_C 328 GMCLMTL-VGH-DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405 (410)
T ss_dssp TEEEEEE-ECC-SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CceEEEE-ECC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 9988776 578 88999999999999999999999999999976544332210 011111112334678888999999
Q ss_pred eecc
Q 016257 353 FWNF 356 (392)
Q Consensus 353 ~W~~ 356 (392)
+|++
T Consensus 406 vW~~ 409 (410)
T 1vyh_C 406 VWEC 409 (410)
T ss_dssp EEC-
T ss_pred EEeC
Confidence 9986
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.6e-46 Score=323.08 Aligned_cols=286 Identities=17% Similarity=0.191 Sum_probs=245.1
Q ss_pred ceEEEeeCCCCCeeEEEEcCC----CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEE
Q 016257 54 LVTYVFDESEGDPMTIAVNPS----GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAA 129 (392)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~sp~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 129 (392)
.....+++|.+.|++++|+|+ +++|++|+.|++|++|++...+....... ..|...|.+++|++++.++++
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l-----~gh~~~v~~~~~~~~~~~l~s 97 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL-----EGHQLGVVSVDISHTLPIAAS 97 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECSSSSEEEE
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeee-----ccCCCCEEEEEECCCCCEEEE
Confidence 344556789999999999985 56899999999999999987653222111 147889999999999999999
Q ss_pred EeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCC
Q 016257 130 GGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209 (392)
Q Consensus 130 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 209 (392)
++.|++|++||+++++.+..+..+...+.+++|+|++++|++++.|+.|++||+++++....+..+. ..+.+++|+|++
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~-~~v~~~~~spdg 176 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG-KFILSIAYSPDG 176 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS-SCEEEEEECTTS
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC-ceEEEEEECCCC
Confidence 9999999999999999888887777889999999999999999999999999999998888877654 479999999999
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCc
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGT 289 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 289 (392)
+. +++++.|+.|++||+++++.+..+..|..+|++++|+|++++|++++.|+.|++||+++++....+ .+| ..
T Consensus 177 ~~-----lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~h-~~ 249 (321)
T 3ow8_A 177 KY-----LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL-SGH-AS 249 (321)
T ss_dssp SE-----EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE-CCC-SS
T ss_pred CE-----EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE-cCC-CC
Confidence 97 799999999999999999999999999999999999999999999999999999999998887766 578 88
Q ss_pred ceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccc--------eeeeeeeeeeeeeceEEEEeeecceeeeeccc
Q 016257 290 SIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKE--------WQIYSLLLALFLASAVVFYIFFENSDSFWNFP 357 (392)
Q Consensus 290 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~ 357 (392)
.|.+++|+|++++|++++.|+.|++|++........ +.+.+.+ ....+++++.|+.|++||.+
T Consensus 250 ~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~-----~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 250 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG-----NGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-----TSSEEEEEETTCCEEEEECC
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC-----CCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999999999999976543322 2222222 34467888899999999964
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.5e-46 Score=325.19 Aligned_cols=294 Identities=11% Similarity=0.088 Sum_probs=234.9
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEE-----EcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFS-----FDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDF 78 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~-----~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 78 (392)
...|.+++|+||+. +++.++ +..+++|+ ++...... ..... .....|...|.+++|+|++ .|
T Consensus 30 ~~~v~~~~fs~dG~---~l~~~s-------d~~~r~Wd~~~~~~~~~~~~~-~~~~~-~~~~~~~~~v~~~~~s~d~-~l 96 (344)
T 4gqb_B 30 ERQLEAARYRSDGA---LLLGAS-------SLSGRCWAGSLWLFKDPCAAP-NEGFC-SAGVQTEAGVADLTWVGER-GI 96 (344)
T ss_dssp CSEEEEEEECTTSC---EEEEEE-------CCSSSCCCEEEEEESSGGGTT-CGGGC-SEEEEESSCEEEEEEETTT-EE
T ss_pred cCCEEEEEECCCCC---EEEEEe-------CCceEEeeceeeeeccccccC-Cccee-eeeeccCCCEEEEEEeCCC-eE
Confidence 35699999999994 455333 23344443 33211111 01111 1223457789999999985 78
Q ss_pred EEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEE
Q 016257 79 VCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVL 158 (392)
Q Consensus 79 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~ 158 (392)
++|+.||+|+|||+.+++........ ...|.+.|++++|+|++++|++|+.|++|++||+++++.+..+.+|...|.
T Consensus 97 ~~~s~dg~v~lWd~~~~~~~~~~~~~---~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 97 LVASDSGAVELWELDENETLIVSKFC---KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp EEEETTSEEEEEEECTTSSCEEEEEE---EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEEECCCEEEEEeccCCCceeEeecc---ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 89999999999999988754433211 124889999999999999999999999999999999999988989999999
Q ss_pred EEEecCCCC-eEEEEcCCCcEEEEECCCCeeeEEEecC-CCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee
Q 016257 159 DMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRN-SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236 (392)
Q Consensus 159 ~i~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~ 236 (392)
+++|+|++. +|++++.|++|++||+++++....+... +...+.+++|+|++..+ +++++.|+.|++||++++++
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----l~sg~~dg~v~~wd~~~~~~ 249 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV----FVFGDENGTVSLVDTKSTSC 249 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE----EEEEETTSEEEEEESCC--C
T ss_pred EEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcc----eEEeccCCcEEEEECCCCcE
Confidence 999999885 6889999999999999999888877532 34468999999976652 67889999999999999999
Q ss_pred eeeecccCCCcEEEEECCCC-CEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCC-eEEEEeCCCeEEE
Q 016257 237 IGHKRLLRKPASVLSISLDG-KYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR-VVLTASKEWGAMI 314 (392)
Q Consensus 237 ~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i 314 (392)
+..+..|...|++++|+|++ ++|++|+.|++|+|||++++++... .+| ...|++++|+|+++ +|++++.|++|++
T Consensus 250 ~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~--~~H-~~~V~~v~~sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 250 VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS--QAH-RDFVRDATWSPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE--CCC-SSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE--cCC-CCCEEEEEEeCCCCeEEEEEcCCCeEEE
Confidence 99999999999999999998 6899999999999999999987653 588 89999999999987 5678999999999
Q ss_pred EEeecC
Q 016257 315 TKLTVP 320 (392)
Q Consensus 315 w~~~~~ 320 (392)
|++...
T Consensus 327 w~v~~~ 332 (344)
T 4gqb_B 327 HVVPTE 332 (344)
T ss_dssp EECCC-
T ss_pred EECCCC
Confidence 999753
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.7e-45 Score=323.96 Aligned_cols=284 Identities=16% Similarity=0.188 Sum_probs=244.8
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|++++|+|++. ++++|+. |+.|++|+.. .......+..|...|.+++|+|++++|++|+.
T Consensus 55 ~~~v~~~~~s~d~~---~l~s~s~------Dg~v~iWd~~--------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 117 (340)
T 1got_B 55 LAKIYAMHWGTDSR---LLLSASQ------DGKLIIWDSY--------TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 117 (340)
T ss_dssp SSCEEEEEECTTSS---EEEEEET------TTEEEEEETT--------TCCEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred CCceEEEEECCCCC---EEEEEeC------CCcEEEEECC--------CCCcceEeecCCccEEEEEECCCCCEEEEEeC
Confidence 46899999999984 4665554 7789999876 33445667889999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|+.+++|++.+.+........ ...|.+.|.++.|++++ .+++++.|++|++||+++++....+..|...|.+++|+
T Consensus 118 d~~v~iw~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 193 (340)
T 1got_B 118 DNICSIYNLKTREGNVRVSRE---LAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193 (340)
T ss_dssp TCEEEEEETTTCSBSCEEEEE---EECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCeEEEEECccCCCcceeEEE---ecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEEC
Confidence 999999998765422221111 11377899999999887 58899999999999999999988888888899999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc-
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL- 242 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~- 242 (392)
|+++++++++.|++|++||+++++....+..+. ..|.+++|+|++.. +++++.|+.|++||+++++.+..+..
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~p~~~~-----l~s~s~d~~v~iwd~~~~~~~~~~~~~ 267 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHE-SDINAICFFPNGNA-----FATGSDDATCRLFDLRADQELMTYSHD 267 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCc-CCEEEEEEcCCCCE-----EEEEcCCCcEEEEECCCCcEEEEEccC
Confidence 999999999999999999999999988887664 47999999999987 79999999999999998877655543
Q ss_pred -cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEE
Q 016257 243 -LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITK 316 (392)
Q Consensus 243 -~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 316 (392)
+...+++++|+|+|++|++|+.|+.|++||+.+++....+ .+| ...|.+++|+|+|++|++|+.|+.|++|+
T Consensus 268 ~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~-~~h-~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL-AGH-DNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECC-SSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe-ecC-CCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 2347999999999999999999999999999998887766 588 89999999999999999999999999996
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-45 Score=327.19 Aligned_cols=300 Identities=13% Similarity=0.125 Sum_probs=235.6
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
...|++++|+||+ .++++|+....---++.+++|..... .. .........+|...|++++|+|+++ +++++.
T Consensus 42 ~~~V~~v~fSpDG---~~las~s~d~~~~wd~~v~~~~~~~~--~~--~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~ 113 (357)
T 4g56_B 42 EVQIGAVRYRRDG---ALLLAASSLSSRTWGGSIWVFKDPEG--AP--NESLCTAGVQTEAGVTDVAWVSEKG-ILVASD 113 (357)
T ss_dssp CSEEEEEEECSSS---CEEEEEECSSSSSCCEEEEEESSCC-------CGGGCSEEEECSSCEEEEEEETTTE-EEEEET
T ss_pred cCCEEEEEECCCC---CEEEEEcCCCCccccCeEEEEECCCC--Cc--ceeEecccCCCCCCEEEEEEcCCCC-EEEEEC
Confidence 4579999999999 45666654321112455666544322 11 1122234557889999999999985 556788
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
||+|+|||+.+++....... ....|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 114 dg~v~lWd~~~~~~~~~~~~---~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKF---AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp TSCEEEC--------CCCCE---EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCEEEEeeccccceeEEEee---ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 99999999988764322211 122478899999999999999999999999999999999988888888999999999
Q ss_pred CCCC-eEEEEcCCCcEEEEECCCCeeeEEEec-CCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeec
Q 016257 164 LDSE-FLATTSTDGSARIWKTEDGVAWTFLTR-NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (392)
Q Consensus 164 ~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~ 241 (392)
|++. ++++++.|++|++||++++++...+.. .+...+.+++|+|++..+ +++++.|+.|++||+++++.+..+.
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~----la~g~~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT----FACGDETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE----EEEEESSSCEEEEESSCGGGCEEEC
T ss_pred cCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce----EEEeecccceeEEECCCCcEeEEEe
Confidence 9875 788999999999999999887766543 344579999999987652 6788999999999999999999999
Q ss_pred ccCCCcEEEEECCCC-CEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEee-CCCeEEEEeCCCeEEEEEeec
Q 016257 242 LLRKPASVLSISLDG-KYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP-TQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 242 ~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~ 319 (392)
.|...|++++|+|++ ++|++|+.|++|+|||+++++....+ +| ...|++++|+| ++++|++++.||+|++|++..
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--~H-~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL--SH-RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--CC-SSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--CC-CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999987 67999999999999999999887654 78 89999999998 789999999999999999975
Q ss_pred Cc
Q 016257 320 PA 321 (392)
Q Consensus 320 ~~ 321 (392)
..
T Consensus 344 ~~ 345 (357)
T 4g56_B 344 EG 345 (357)
T ss_dssp --
T ss_pred CC
Confidence 43
No 9
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.9e-45 Score=348.38 Aligned_cols=325 Identities=14% Similarity=0.139 Sum_probs=258.6
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.+.+.+++|+|+++. ++++. ++.+.+|.++ .+.....+.+|.+.|++++|+|+|++||+|+.
T Consensus 18 ~g~~~~~~~spdg~~---l~~~~-------~~~v~l~~~~--------~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~ 79 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDK---IQYCN-------GTSVYTVPVG--------SLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 79 (611)
T ss_dssp TTCCCCCEECTTSSE---EEEEE-------TTEEEEEETT--------CSSCCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cCceeEEeeCCCCCE---EEeCC-------CCEEEEecCC--------CcccCeEecCCCCceEEEEECCCCcEEEEEeC
Confidence 467889999999854 55332 3468888875 33344668899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC----CcEEEEeCCCCceeecccCCCCcEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----GHLRIMHWPSLRIILDEPKAHKSVLD 159 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~ 159 (392)
|++|+|||+.+++........ .|.+.|.+++|+|++++|++++.+ +.|++|| +++....+.+|...|.+
T Consensus 80 d~~v~lWd~~~~~~~~~~~~~-----~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~ 152 (611)
T 1nr0_A 80 HGNVRIWDTTQTTHILKTTIP-----VFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNS 152 (611)
T ss_dssp TSEEEEEESSSTTCCEEEEEE-----CSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEE
T ss_pred CCCEEEeECCCCcceeeEeec-----ccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceE
Confidence 999999998755432221111 367899999999999999998865 3677776 55666677788889999
Q ss_pred EEecCCCC-eEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeee
Q 016257 160 MDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIG 238 (392)
Q Consensus 160 i~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~ 238 (392)
++|+|++. .|++++.|++|++||.+.++....+..|. ..|.+++|+|+++. +++++.|+.|++||+++++.+.
T Consensus 153 v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~-~~V~~v~fspdg~~-----las~s~D~~i~lwd~~~g~~~~ 226 (611)
T 1nr0_A 153 VDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT-KFVHSVRYNPDGSL-----FASTGGDGTIVLYNGVDGTKTG 226 (611)
T ss_dssp EEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSCEEEEETTTCCEEE
T ss_pred EEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecccc-CceEEEEECCCCCE-----EEEEECCCcEEEEECCCCcEee
Confidence 99999987 59999999999999999988888887654 48999999999997 8999999999999999988877
Q ss_pred eec-------ccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee-----------------------------
Q 016257 239 HKR-------LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS----------------------------- 282 (392)
Q Consensus 239 ~~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----------------------------- 282 (392)
.+. .|...|.+++|+|++++|++++.|++|++||+.+++....+
T Consensus 227 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i 306 (611)
T 1nr0_A 227 VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 306 (611)
T ss_dssp ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred eeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcE
Confidence 663 68899999999999999999999999999999987654322
Q ss_pred -------------eccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccce---eeeeeeeeeeeeceEEEEee
Q 016257 283 -------------KRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEW---QIYSLLLALFLASAVVFYIF 346 (392)
Q Consensus 283 -------------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 346 (392)
..+| ...|++++|+|+|++|++++.|+.|++|++..+...... +........+.....+++++
T Consensus 307 ~~~~~~~~~~~~~~~gh-~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s 385 (611)
T 1nr0_A 307 NFVNPELGSIDQVRYGH-NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS 385 (611)
T ss_dssp EEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEE
T ss_pred EEEeCCCCCcceEEcCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEE
Confidence 1367 789999999999999999999999999999765332111 00000011111345677888
Q ss_pred ecceeeeecccccc
Q 016257 347 FENSDSFWNFPVAR 360 (392)
Q Consensus 347 ~d~~i~~W~~~~~~ 360 (392)
.|+.+++|++..+.
T Consensus 386 ~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 386 WDDHLKVVPAGGSG 399 (611)
T ss_dssp TTTEEEEECSSSSS
T ss_pred cCCceEEeecCCcc
Confidence 99999999987654
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.8e-45 Score=314.63 Aligned_cols=283 Identities=11% Similarity=0.137 Sum_probs=244.1
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
..+|++++|+|+++ ++++|+. ++.+++|+++ .......+.+|..+|.+++|+|++++|++|+.
T Consensus 13 ~~~V~~~~fsp~~~---~l~s~~~------dg~v~lWd~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 75 (304)
T 2ynn_A 13 SDRVKGIDFHPTEP---WVLTTLY------SGRVELWNYE--------TQVEVRSIQVTETPVRAGKFIARKNWIIVGSD 75 (304)
T ss_dssp CSCEEEEEECSSSS---EEEEEET------TSEEEEEETT--------TTEEEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEECCCCC---EEEEEcC------CCcEEEEECC--------CCceeEEeeccCCcEEEEEEeCCCCEEEEECC
Confidence 46899999999984 4555544 7789999886 44556678899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCce-eecccCCCCcEEEEEe
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI-ILDEPKAHKSVLDMDF 162 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~i~~ 162 (392)
|++|++||+.+++....+. .|...|.+++|+|++++|++|+.|++|++||++++.. ...+..|...|.+++|
T Consensus 76 d~~i~vwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFE-------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp TSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEe-------CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEE
Confidence 9999999998887655443 3778999999999999999999999999999988744 4456677789999999
Q ss_pred cC-CCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecC--CCCcceEEEEEEeCCccEEEEEeCCCceeeee
Q 016257 163 SL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK--DGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239 (392)
Q Consensus 163 ~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~ 239 (392)
+| ++..|++++.|++|++||++++.....+..++...+..+.|+| ++.. +++++.|+.|++||+++++++..
T Consensus 149 ~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----l~s~s~D~~i~iWd~~~~~~~~~ 223 (304)
T 2ynn_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY-----MITASDDLTIKIWDYQTKSCVAT 223 (304)
T ss_dssp CTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCE-----EEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCE-----EEEEcCCCeEEEEeCCCCcccee
Confidence 99 6789999999999999999988887777766666799999987 4454 79999999999999999999999
Q ss_pred ecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCC--eEEEEeCCCeEEEEEe
Q 016257 240 KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR--VVLTASKEWGAMITKL 317 (392)
Q Consensus 240 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~i~iw~~ 317 (392)
+..|...|.+++|+|++.+|++|+.||.|++||+++++....+ ..| ...+.+++|+|++. ++++|+.| .+.+|++
T Consensus 224 ~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~ 300 (304)
T 2ynn_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL-NVG-LERSWCIATHPTGRKNYIASGFDN-GFTVLSL 300 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCS-SSSEEEEEECTTCGGGCEEEEETT-EEEEEEC
T ss_pred eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeec-cCC-CccEEEEEECCCCCceEEEEecCC-ceEEEEe
Confidence 9999999999999999999999999999999999999988877 466 78999999999886 57777655 6777776
Q ss_pred e
Q 016257 318 T 318 (392)
Q Consensus 318 ~ 318 (392)
.
T Consensus 301 ~ 301 (304)
T 2ynn_A 301 G 301 (304)
T ss_dssp C
T ss_pred c
Confidence 5
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.2e-45 Score=314.18 Aligned_cols=290 Identities=11% Similarity=0.097 Sum_probs=236.7
Q ss_pred eEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCC
Q 016257 55 VTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG 134 (392)
Q Consensus 55 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 134 (392)
...++.+|.+.|++++|+|++++|++++.||.|++||+.++.....+. .|..+|.+++|+|++++|++|+.|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ-------VTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-------CCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee-------ccCCcEEEEEEeCCCCEEEEECCCC
Confidence 456788999999999999999999999999999999998876554443 2667899999999999999999999
Q ss_pred cEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCC-CCcce
Q 016257 135 HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKD-GTKPF 213 (392)
Q Consensus 135 ~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~ 213 (392)
+|++||+++++.+..+..|...|.+++|+|++++|++++.|++|++||++++.........+...|.+++|+|+ +..
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~-- 155 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST-- 155 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE--
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE--
Confidence 99999999999998888899999999999999999999999999999998875444333344568999999995 554
Q ss_pred EEEEEEeCCccEEEEEeCCCceeeeeec-ccCCCcEEEEECC--CCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcc
Q 016257 214 LFCTVQRGDKALLAVYDISTWNKIGHKR-LLRKPASVLSISL--DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTS 290 (392)
Q Consensus 214 ~~~~~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 290 (392)
+++++.|+.|++||+++......+. .+...+..+.|+| ++.+|++|+.|+.|++||+++++.+..+ .+| ...
T Consensus 156 ---l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~-~~h-~~~ 230 (304)
T 2ynn_A 156 ---FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL-EGH-MSN 230 (304)
T ss_dssp ---EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE-ECC-SSC
T ss_pred ---EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee-CCC-CCC
Confidence 7999999999999998876654443 4557899999987 7789999999999999999999988877 588 899
Q ss_pred eEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceeeee-eeeee--eeec-eEEEEeeecceeeeecccc
Q 016257 291 IALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQIYS-LLLAL--FLAS-AVVFYIFFENSDSFWNFPV 358 (392)
Q Consensus 291 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~--~~~~-~~~~~~~~d~~i~~W~~~~ 358 (392)
|.+++|+|++++|++|+.||.|++|++...+......... ..... .... ...++++.++.+.+|++..
T Consensus 231 v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 9999999999999999999999999987654332221100 00011 1111 2235566788888888764
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-44 Score=316.67 Aligned_cols=302 Identities=12% Similarity=0.108 Sum_probs=234.3
Q ss_pred ceEEEeeCCCC-CeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC
Q 016257 54 LVTYVFDESEG-DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV 132 (392)
Q Consensus 54 ~~~~~~~~h~~-~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 132 (392)
.....+.+|.+ .|.+++|+|+|++||+|+.|++|+|||+.++........ ...|...|.+++|+|++++|++|+.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~----~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVL----SEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEE----CSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeee----ccccCCcEEEEEECCCCCEEEEEEC
Confidence 34567888988 999999999999999999999999999987753222111 1247889999999999999999999
Q ss_pred CCcEEEEeCCCCc--eeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCee---eEEEecCCCcceEEEEecC
Q 016257 133 DGHLRIMHWPSLR--IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA---WTFLTRNSDEKIELCRFSK 207 (392)
Q Consensus 133 dg~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~ 207 (392)
|+++++|++.++. .+..+.+|...|.+++|+|++++|++++.|++|++||++++.. +..+.. +...|.+++|+|
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p 160 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHP 160 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECC
Confidence 9999999998764 4556777888999999999999999999999999999987643 344444 455799999999
Q ss_pred CCCcceEEEEEEeCCccEEEEEeCCCce--eeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCc---------
Q 016257 208 DGTKPFLFCTVQRGDKALLAVYDISTWN--KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKM--------- 276 (392)
Q Consensus 208 ~~~~~~~~~~~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--------- 276 (392)
++.. +++++.|+.|++||.+.++ ....+..|...|++++|+|+|++|++++.|++|++||....
T Consensus 161 ~~~~-----l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 161 SQEL-----LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp SSSC-----EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred CCCE-----EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee
Confidence 9997 8999999999999998765 34677889999999999999999999999999999997432
Q ss_pred ------eeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcccc--ceeeee--------eeeee-ee-e
Q 016257 277 ------EINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWK--EWQIYS--------LLLAL-FL-A 338 (392)
Q Consensus 277 ------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~--------~~~~~-~~-~ 338 (392)
+.+..+...| ...|.+++|+|++..|++++.|+.|++|+........ ...... .+... +. .
T Consensus 236 ~~~~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~ 314 (345)
T 3fm0_A 236 GSDPSWKCICTLSGFH-SRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPK 314 (345)
T ss_dssp ---CEEEEEEEECSSC-SSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSS
T ss_pred ccCCccceeEEecCCC-CCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCC
Confidence 1222332336 7899999999999999999999999999987543211 111100 01111 11 1
Q ss_pred c-eEEEEeeecceeeeecccccccccCCC
Q 016257 339 S-AVVFYIFFENSDSFWNFPVARNQHGGP 366 (392)
Q Consensus 339 ~-~~~~~~~~d~~i~~W~~~~~~~~~~~p 366 (392)
. ..+++++.|+.|++|++..++...+.|
T Consensus 315 ~~~~laS~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 315 EPGLLASCSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp STTEEEEEETTSCEEEEEECC--------
T ss_pred CceEEEEcCCCCcEEEEEecCCCCccccc
Confidence 2 368888999999999999887665544
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.4e-44 Score=316.60 Aligned_cols=288 Identities=13% Similarity=0.109 Sum_probs=239.7
Q ss_pred ceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC
Q 016257 54 LVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (392)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (392)
.....+.+|.+.|++++|+|++++|++|+.|++|++||+.+++....+. .|...|.+++|+|++++|++|+.|
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP-------LRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-------CSSSCEEEEEECTTSSEEEEEETT
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee-------cCCccEEEEEECCCCCEEEEEeCC
Confidence 4566799999999999999999999999999999999998876544433 256789999999999999999999
Q ss_pred CcEEEEeCCCCc----eeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCC
Q 016257 134 GHLRIMHWPSLR----IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209 (392)
Q Consensus 134 g~i~i~d~~~~~----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 209 (392)
+.+++|++.+.+ ....+..|...|.++.|++++. +++++.|++|++||+++++.+..+..|. ..|.+++|+|++
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~~ 196 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHT-GDVMSLSLAPDT 196 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTS
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCC-CceEEEEECCCC
Confidence 999999998753 3445567778999999998775 8899999999999999999988887654 479999999999
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCc
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGT 289 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 289 (392)
.. +++++.|+.|++||+++++....+..|...|++++|+|++++|++|+.||.|++||+++++....+.......
T Consensus 197 ~~-----l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~ 271 (340)
T 1got_B 197 RL-----FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC 271 (340)
T ss_dssp SE-----EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCS
T ss_pred CE-----EEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCccc
Confidence 86 7899999999999999999999999999999999999999999999999999999999988766543211145
Q ss_pred ceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee---eeeeeeeeeeceEEEEeeecceeeeec
Q 016257 290 SIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI---YSLLLALFLASAVVFYIFFENSDSFWN 355 (392)
Q Consensus 290 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~i~~W~ 355 (392)
.|++++|+|+|++|++|+.||.|++|++........... .............+++++.|+.|++||
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 799999999999999999999999999875543222110 001111112334678888999999997
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-44 Score=318.47 Aligned_cols=287 Identities=17% Similarity=0.189 Sum_probs=243.7
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|+|++|+|++. ++++|+. |+.+++|+.. .......+..|...|.+++|+|++.+|++|+.
T Consensus 64 ~~~V~~~~~s~d~~---~l~s~s~------Dg~v~vWd~~--------~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~ 126 (354)
T 2pbi_B 64 GNKVLCMDWCKDKR---RIVSSSQ------DGKVIVWDSF--------TTNKEHAVTMPCTWVMACAYAPSGCAIACGGL 126 (354)
T ss_dssp SSCEEEEEECTTSS---EEEEEET------TSEEEEEETT--------TCCEEEEEECSSSCCCEEEECTTSSEEEEEST
T ss_pred CCeEEEEEECCCCC---EEEEEeC------CCeEEEEECC--------CCCcceEEecCCCCEEEEEECCCCCEEEEeeC
Confidence 46899999999984 4665554 7789999865 33445567788999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|+.+++|++......... ........|...|.+++|+|++..|++++.|++|++||+++++.+..+..|...|.+++|+
T Consensus 127 d~~i~v~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~ 205 (354)
T 2pbi_B 127 DNKCSVYPLTFDKNENMA-AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLA 205 (354)
T ss_dssp TSEEEEEECCCCTTCCSG-GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CCCEEEEEEecccccccc-ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEE
Confidence 999999998654311110 0000111378899999999999999999999999999999999988888888899999998
Q ss_pred C--CCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeec
Q 016257 164 L--DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (392)
Q Consensus 164 ~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~ 241 (392)
| ++++|++++.|++|++||+++++++..+..|. ..|.+++|+|++.. +++++.|+.|++||++..+.+..+.
T Consensus 206 ~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~p~~~~-----l~s~s~D~~v~lwd~~~~~~~~~~~ 279 (354)
T 2pbi_B 206 PSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHE-SDVNSVRYYPSGDA-----FASGSDDATCRLYDLRADREVAIYS 279 (354)
T ss_dssp CCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCeEEEEEeCCCCE-----EEEEeCCCeEEEEECCCCcEEEEEc
Confidence 7 56899999999999999999999988887654 47999999999987 7999999999999999887765554
Q ss_pred cc--CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEE
Q 016257 242 LL--RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITK 316 (392)
Q Consensus 242 ~~--~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 316 (392)
.+ ...+.+++|+|++++|++|+.|+.|++||+.+++.+..+ .+| ...|++++|+|+|++|++|+.||.|++|+
T Consensus 280 ~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l-~~h-~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 280 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGH-ENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE-CCC-SSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEE-ECC-CCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 33 347899999999999999999999999999998877766 588 89999999999999999999999999995
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.7e-45 Score=325.43 Aligned_cols=294 Identities=16% Similarity=0.190 Sum_probs=242.8
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|++++|+|++. ++++|+. |+.|++|+.. .......+.+|...|.+++|+|++++|++|+.
T Consensus 66 ~~~V~~~~~sp~~~---~l~s~s~------D~~v~iWd~~--------~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~ 128 (380)
T 3iz6_a 66 SGKVYSLDWTPEKN---WIVSASQ------DGRLIVWNAL--------TSQKTHAIKLHCPWVMECAFAPNGQSVACGGL 128 (380)
T ss_dssp SSCEEEEEECTTSS---CEEEEET------TSEEEEEETT--------TTEEEEEEECCCTTCCCCEECTTSSEEEECCS
T ss_pred ccEEEEEEEcCCCC---EEEEEeC------CCeEEEEECC--------CCccceEEecCCCCEEEEEECCCCCEEEEeeC
Confidence 47899999999984 4665554 7789999876 44556778899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC-CCEEEEEeCCCcEEEEeCCCCceeecc-----cCCCCcE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLRIILDE-----PKAHKSV 157 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i 157 (392)
|+.+++|++.+................|.+.+.++.|+|+ +..|++|+.|++|++||+++++.+..+ ..|...|
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence 9999999997643211111111112357889999999996 457999999999999999999877554 4566789
Q ss_pred EEEEecC-CCCeEEEEcCCCcEEEEECCC-CeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCce
Q 016257 158 LDMDFSL-DSEFLATTSTDGSARIWKTED-GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN 235 (392)
Q Consensus 158 ~~i~~~~-~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~ 235 (392)
.+++|++ ++++|++|+.|++|++||++. ++.+..+..| ...|.+++|+|++.. +++++.|+.|++||+++++
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~-----l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH-EGDINSVKFFPDGQR-----FGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC-SSCCCEEEECTTSSE-----EEEECSSSCEEEEETTTTE
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc-CCCeEEEEEecCCCe-----EEEEcCCCeEEEEECCCCc
Confidence 9999987 889999999999999999984 4666666655 458999999999997 8999999999999999988
Q ss_pred eeeeecccC-------CCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeee---ccccCcceEEEEEeeCCCeEEE
Q 016257 236 KIGHKRLLR-------KPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK---RLHLGTSIALVEFCPTQRVVLT 305 (392)
Q Consensus 236 ~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~ 305 (392)
.+..+..+. ..+++++|+|+|++|++|+.||.|++||+.+++....+. .+| ...|++++|+|+|++|++
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h-~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSH-EGRISCLGLSSDGSALCT 361 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSC-CCCCCEEEECSSSSEEEE
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCC-CCceEEEEECCCCCEEEE
Confidence 876655432 248899999999999999999999999999887665442 468 889999999999999999
Q ss_pred EeCCCeEEEEEeecCc
Q 016257 306 ASKEWGAMITKLTVPA 321 (392)
Q Consensus 306 ~~~dg~i~iw~~~~~~ 321 (392)
|+.|+.|++|++..+.
T Consensus 362 gs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 362 GSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECTTSCEEEEECCSSS
T ss_pred eeCCCCEEEEecCCCc
Confidence 9999999999998654
No 16
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.6e-45 Score=322.78 Aligned_cols=304 Identities=18% Similarity=0.234 Sum_probs=237.2
Q ss_pred CCceeeeecCCCCCcceeEEEeCCC-CCCCCCcCceeEEEEcCCCCcccc--CCceEEEeeCCCCCeeEEEEcCCCCeEE
Q 016257 3 GGGTVTCGSWIKRPENVNLVVLGKS-SRASSSPSVLEIFSFDPKTTSVYT--SPLVTYVFDESEGDPMTIAVNPSGDDFV 79 (392)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~-~~~~~~~~~i~i~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 79 (392)
.++||+|++|+|++ .++++|++ ...+|.+|+|++|.++........ .......|.+|...|.+++++ ++.++
T Consensus 13 ~g~PV~sv~fs~dg---~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~ 87 (365)
T 4h5i_A 13 VGYPAYGAKFLNND---TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIIL 87 (365)
T ss_dssp CSSCEEEEEEEETT---EEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEE
T ss_pred CCCCEEEEEEeCCC---cEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEE
Confidence 36899999999998 56666654 334678999999999866543321 122345678899999998775 45666
Q ss_pred EE-----------eCCCeEEEEEEeCCccceeeccc--cCCCCCCCCCeEEEEecCCCCEEEEEe--CCCcEEEEeCCCC
Q 016257 80 CS-----------TTNGGCKLFEVYGGATDINLLAK--KMPPLQDAGPQKCLSFSVDGSRFAAGG--VDGHLRIMHWPSL 144 (392)
Q Consensus 80 ~~-----------~~d~~i~iw~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~ 144 (392)
+| +.|+.+++|++............ ......+...+.+++|||||+++++++ .|++|++||++++
T Consensus 88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 65 35778999999876543332211 111223456789999999999987654 6899999999999
Q ss_pred ceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEE-EecCCCcceEEEEecCCCCcceEEEEEEeCCc
Q 016257 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTF-LTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (392)
Q Consensus 145 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d 223 (392)
+.+..+ .++..|.+++|+|||+++++++. +.+++|+..+++.+.. ....+...+.+++|+|++.. +++++.+
T Consensus 168 ~~~~~~-~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~-----l~~~s~d 240 (365)
T 4h5i_A 168 TEKFEI-ETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV-----LIAASLK 240 (365)
T ss_dssp EEEEEE-ECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE-----EEEEEES
T ss_pred cEEEEe-CCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE-----EEEEecC
Confidence 887665 46678999999999999999985 4577777777766543 33445668999999999987 5665555
Q ss_pred c----EEEEEeCCCcee----eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEE
Q 016257 224 A----LLAVYDISTWNK----IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVE 295 (392)
Q Consensus 224 ~----~i~v~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 295 (392)
+ .+.+||+..... ...+..|...|++++|+|+|++||+|+.|+.|+|||+++++.+..+..+| ...|++++
T Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH-~~~V~~v~ 319 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH-SFAITEVT 319 (365)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS-SSCEEEEE
T ss_pred CcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc-cCCEEEEE
Confidence 4 788999876543 34556788899999999999999999999999999999999988776789 99999999
Q ss_pred EeeCCCeEEEEeCCCeEEEEEeec
Q 016257 296 FCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 296 ~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
|+|||++|++|+.|++|+||++..
T Consensus 320 fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 320 ISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ECTTSCEEEEEETTSEEEEEECCT
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999999999999964
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-44 Score=314.56 Aligned_cols=293 Identities=11% Similarity=0.103 Sum_probs=231.4
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d 84 (392)
++|++++|+|++. ++++|+. |+.|++|.++.... ........+|...|.+++|+|++++|++|+.|
T Consensus 17 ~~v~~l~~sp~g~---~las~~~------D~~i~iw~~~~~~~-----~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 17 SRCWFLAWNPAGT---LLASCGG------DRRIRIWGTEGDSW-----ICKSVLSEGHQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp SCEEEEEECTTSS---CEEEEET------TSCEEEEEEETTEE-----EEEEEECSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCC---EEEEEcC------CCeEEEEEcCCCcc-----eeeeeeccccCCcEEEEEECCCCCEEEEEECC
Confidence 4899999999984 4665554 67799999873310 01122346899999999999999999999999
Q ss_pred CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc---eeecccCCCCcEEEEE
Q 016257 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR---IILDEPKAHKSVLDMD 161 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~i~~i~ 161 (392)
+++++|++........... ..|...|.+++|+|++++|++|+.|++|++||++++. .+..+..|...|.+++
T Consensus 83 ~~v~iw~~~~~~~~~~~~~-----~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTL-----EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp SCEEEEEECCC-EEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred CcEEEEEccCCCeEEEEEc-----cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 9999999977642211111 1378899999999999999999999999999998764 3445566777999999
Q ss_pred ecCCCCeEEEEcCCCcEEEEECCCCee--eEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCc-----
Q 016257 162 FSLDSEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW----- 234 (392)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~----- 234 (392)
|+|++++|++++.|++|++||++.++. ...+..| ...|.+++|+|+++. +++++.|+.|++||....
T Consensus 158 ~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h-~~~v~~l~~sp~g~~-----l~s~s~D~~v~iW~~~~~~~~~~ 231 (345)
T 3fm0_A 158 WHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH-ESTVWSLAFDPSGQR-----LASCSDDRTVRIWRQYLPGNEQG 231 (345)
T ss_dssp ECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECTTSSE-----EEEEETTSCEEEEEEECTTCTTC
T ss_pred ECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC-CCceEEEEECCCCCE-----EEEEeCCCeEEEeccccCCCCcc
Confidence 999999999999999999999988753 3455544 558999999999997 899999999999996422
Q ss_pred ----------eeeeeecc-cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCcee--------eeeeeccccCcceEEEE
Q 016257 235 ----------NKIGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI--------NHWSKRLHLGTSIALVE 295 (392)
Q Consensus 235 ----------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~i~~~~ 295 (392)
+++..+.. |...|.+++|+|++..|++++.|+.|++|+...... ......+| ...|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~ 310 (345)
T 3fm0_A 232 VACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH-SQDVNCVA 310 (345)
T ss_dssp CCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS-SSCEEEEE
T ss_pred ceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc-cCcEeEeE
Confidence 22223333 778999999999999999999999999999876431 11222478 88999999
Q ss_pred EeeCCC-eEEEEeCCCeEEEEEeecCccc
Q 016257 296 FCPTQR-VVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 296 ~s~~~~-~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
|+|++. +|++|+.||.|++|++...+..
T Consensus 311 ~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 311 WNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp ECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred EeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 999985 9999999999999999876543
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-43 Score=306.02 Aligned_cols=284 Identities=16% Similarity=0.228 Sum_probs=246.4
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
..+|++++|+|++. ++++|+. ++.+++|... .......+.+|...|.+++|+|++++|++++.
T Consensus 23 ~~~v~~~~~s~~~~---~l~s~~~------dg~i~iw~~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 85 (312)
T 4ery_A 23 TKAVSSVKFSPNGE---WLASSSA------DKLIKIWGAY--------DGKFEKTISGHKLGISDVAWSSDSNLLVSASD 85 (312)
T ss_dssp SSCEEEEEECTTSS---EEEEEET------TSCEEEEETT--------TCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEEECCCCC---EEEEeeC------CCeEEEEeCC--------CcccchhhccCCCceEEEEEcCCCCEEEEECC
Confidence 46899999999984 4555544 6679999875 33455678899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|+.|++||+.+++....+. .|...|.+++|+|++++|++++.|+.|++||+++++....+..|...|.+++|+
T Consensus 86 d~~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLK-------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 158 (312)
T ss_dssp TSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CCEEEEEECCCCcEEEEEc-------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEc
Confidence 9999999998877554443 267889999999999999999999999999999999888888888899999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeeccc
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL 243 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~ 243 (392)
|++++|++++.|+.|++||+++++.+..+...+...+..++|+|+++. +++++.|+.|++||+++++.+..+..|
T Consensus 159 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~~~d~~i~iwd~~~~~~~~~~~~~ 233 (312)
T 4ery_A 159 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY-----ILAATLDNTLKLWDYSKGKCLKTYTGH 233 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE-----EEEEETTTEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE-----EEEEcCCCeEEEEECCCCcEEEEEEec
Confidence 999999999999999999999999888877666668999999999997 788999999999999999988888777
Q ss_pred CCCcE---EEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEe--CCCeEEEEEee
Q 016257 244 RKPAS---VLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTAS--KEWGAMITKLT 318 (392)
Q Consensus 244 ~~~v~---~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~iw~~~ 318 (392)
..... .....+++.+|++|+.||.|++||+++++....+ .+| ...|.+++|+|++++|++++ .|+.|++|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h-~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 234 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL-QGH-TDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEE-CCC-SSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhh-hcc-CCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 65432 2333467899999999999999999999888776 578 88999999999999999997 69999999864
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-43 Score=306.91 Aligned_cols=288 Identities=11% Similarity=0.105 Sum_probs=242.8
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|++++|+|++.+ ++++|+. |+.+++|.+...... .......+.+|...|.+++|+|++++|++|+.
T Consensus 17 ~~~V~~l~~~~~~~~--~l~s~s~------D~~v~~W~~~~~~~~---~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 17 NGWVTSLATSAGQPN--LLLSASR------DKTLISWKLTGDDQK---FGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp SSCEEEEEECSSCTT--EEEEEET------TSEEEEEEEEEETTE---EEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred cceEEEEEccCCCcc--EEEEecC------CccEEEecCCCCCcc---ccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 578999999997644 5565554 788999998643211 12345678999999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|++|++||+.+++....+. .|...|.+++|+|++.+|++|+.|++|++||++. +.+..+..|...|.++.|+
T Consensus 86 D~~v~~wd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~ 157 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFV-------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVV 157 (319)
T ss_dssp TSEEEEEETTTTEEEEEEE-------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEEC
T ss_pred CCEEEEEECCCCCeeEEEc-------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEc
Confidence 9999999998887654443 3778999999999999999999999999999964 5666777888899999999
Q ss_pred CC------CCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceee
Q 016257 164 LD------SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKI 237 (392)
Q Consensus 164 ~~------~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~ 237 (392)
|. +..+++++.|+.|++||+++.+....+..|. ..|.+++|+|++.. +++++.|+.|++||+++++.+
T Consensus 158 ~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~sp~g~~-----l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 158 PNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN-SNINTLTASPDGTL-----IASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp CC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC-SCEEEEEECTTSSE-----EEEEETTCEEEEEETTTTEEE
T ss_pred cCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC-CcEEEEEEcCCCCE-----EEEEeCCCeEEEEECCCCcEE
Confidence 85 4489999999999999999998888877654 48999999999997 899999999999999999888
Q ss_pred eeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeee-------ccccCcceEEEEEeeCCCeEEEEeCCC
Q 016257 238 GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK-------RLHLGTSIALVEFCPTQRVVLTASKEW 310 (392)
Q Consensus 238 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~i~~~~~s~~~~~l~~~~~dg 310 (392)
..+.. ...+.+++|+|++.+|++++.+ .+++|++........+. ..| ...+.+++|+|||++|++|+.||
T Consensus 232 ~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~l~sg~~Dg 308 (319)
T 3frx_A 232 YTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAA-EPHAVSLAWSADGQTLFAGYTDN 308 (319)
T ss_dssp EEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGG-CCCEEEEEECTTSSEEEEEETTS
T ss_pred EEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCc-CcceeEEEECCCCCEEEEeecCc
Confidence 77765 4689999999999999998865 49999998877655442 223 56799999999999999999999
Q ss_pred eEEEEEeec
Q 016257 311 GAMITKLTV 319 (392)
Q Consensus 311 ~i~iw~~~~ 319 (392)
.|++|++.+
T Consensus 309 ~i~vWd~~t 317 (319)
T 3frx_A 309 VIRVWQVMT 317 (319)
T ss_dssp CEEEEEEEE
T ss_pred eEEEEEEee
Confidence 999999875
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.1e-43 Score=306.65 Aligned_cols=293 Identities=12% Similarity=0.169 Sum_probs=237.6
Q ss_pred ceEEEeeCCCCCeeEEEEcCCC-CeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC
Q 016257 54 LVTYVFDESEGDPMTIAVNPSG-DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV 132 (392)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~sp~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 132 (392)
.+..++.+|.+.|++++|+|++ ++|++|+.|++|++|++............ ....|...|.+++|+|++++|++|+.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~--~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVR--SFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEE--EEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccce--EEeCCcccEEEEEECCCCCEEEEEeC
Confidence 4456789999999999999965 79999999999999999754322111000 01147889999999999999999999
Q ss_pred CCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcc
Q 016257 133 DGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 133 dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
|++|++||+++++....+..|...|.+++|+|++++|++++.|++|++||++ ++++..+..+ ...+.+++|+|.....
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h-~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGH-NDWVSQVRVVPNEKAD 163 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCC-SSCEEEEEECCC----
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEecc-CCcEEEEEEccCCCCC
Confidence 9999999999999988888999999999999999999999999999999996 4566666655 4579999999964310
Q ss_pred -eEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcce
Q 016257 213 -FLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSI 291 (392)
Q Consensus 213 -~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i 291 (392)
-...+++++.|+.|++||+++.+....+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+. + ...|
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~-~~~v 240 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS--A-QDEV 240 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--C-CSCE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--C-CCcE
Confidence 00017899999999999999999888899999999999999999999999999999999999999887763 2 5689
Q ss_pred EEEEEeeCCCeEEEEeCCCeEEEEEeecCcccc----------------ceeeeeeeeeeeeeceEEEEeeecceeeeec
Q 016257 292 ALVEFCPTQRVVLTASKEWGAMITKLTVPADWK----------------EWQIYSLLLALFLASAVVFYIFFENSDSFWN 355 (392)
Q Consensus 292 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~ 355 (392)
.+++|+|++.+|++++.+ .+++|++....... +..+.+.+ ....+++++.|+.|++|+
T Consensus 241 ~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-----dg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 241 FSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSA-----DGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp EEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECT-----TSSEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECC-----CCCEEEEeecCceEEEEE
Confidence 999999999999888765 69999986432111 11222222 344677888999999999
Q ss_pred cccc
Q 016257 356 FPVA 359 (392)
Q Consensus 356 ~~~~ 359 (392)
+.++
T Consensus 315 ~~t~ 318 (319)
T 3frx_A 315 VMTA 318 (319)
T ss_dssp EEEC
T ss_pred Eeec
Confidence 9865
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.4e-43 Score=309.99 Aligned_cols=284 Identities=11% Similarity=0.135 Sum_probs=237.7
Q ss_pred ceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC
Q 016257 54 LVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (392)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (392)
.....+.+|.+.|++++|+|++++|++|+.|++|++||..+.+....+.. |...|.+++|+|++.+|++|+.|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-------~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-------PCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-------SSSCCCEEEECTTSSEEEEESTT
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-------CCCCEEEEEECCCCCEEEEeeCC
Confidence 35567899999999999999999999999999999999877765443322 45689999999999999999999
Q ss_pred CcEEEEeCCCCc------eeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecC
Q 016257 134 GHLRIMHWPSLR------IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK 207 (392)
Q Consensus 134 g~i~i~d~~~~~------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 207 (392)
+.+++|++.... ....+..|...|.+++|+|++..|++++.|++|++||+++++.+..+..|. ..+.+++|+|
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~-~~v~~~~~~~ 206 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHG-ADVLCLDLAP 206 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECC
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCC-CCeEEEEEEe
Confidence 999999986432 233345677789999999999999999999999999999999998888665 4799999988
Q ss_pred C--CCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecc
Q 016257 208 D--GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL 285 (392)
Q Consensus 208 ~--~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 285 (392)
+ +.. +++++.|+.|++||+++++++..+..|...|++++|+|++.+|++++.|++|++||+++++....+...
T Consensus 207 ~~~g~~-----l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~ 281 (354)
T 2pbi_B 207 SETGNT-----FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE 281 (354)
T ss_dssp CSSCCE-----EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred CCCCCE-----EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC
Confidence 5 454 789999999999999999999999999999999999999999999999999999999988766554322
Q ss_pred ccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcccc--------ceeeeeeeeeeeeeceEEEEeeecceeeeec
Q 016257 286 HLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWK--------EWQIYSLLLALFLASAVVFYIFFENSDSFWN 355 (392)
Q Consensus 286 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~ 355 (392)
.....+.+++|+|++++|++|+.|+.|++|++....... +..+.+.+ ....+++++.|+.|++|+
T Consensus 282 ~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp-----dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 282 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP-----DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-----TSSCEEEEETTSEEEEEC
T ss_pred CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECC-----CCCEEEEEcCCCCEEecC
Confidence 114578999999999999999999999999986554322 22222332 344677888999999996
No 22
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.8e-43 Score=307.05 Aligned_cols=301 Identities=15% Similarity=0.136 Sum_probs=230.6
Q ss_pred ceEEEeeCCCCCeeEEEE-----cC-CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEE
Q 016257 54 LVTYVFDESEGDPMTIAV-----NP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF 127 (392)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~-----sp-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 127 (392)
.....+.+|.+.|++++| ++ ++++|++|+.|++|++||+...+..............|...|.+++|+|++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 345678999999999999 76 899999999999999999976542111000001112478899999999999999
Q ss_pred EEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe--cCCCcceEEEEe
Q 016257 128 AAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT--RNSDEKIELCRF 205 (392)
Q Consensus 128 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~ 205 (392)
++++.|++|++||+++++....+..|...|.+++|+|++++|++++.|++|++||+... ...... ..+...+.+++|
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeee
Confidence 99999999999999999998888889899999999999999999999999999999743 333332 134557999999
Q ss_pred cCCCCcce-----EEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCce-ee
Q 016257 206 SKDGTKPF-----LFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME-IN 279 (392)
Q Consensus 206 ~~~~~~~~-----~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~ 279 (392)
+|++.... .-.+++++.|+.|++||. ..+....+..|...|.+++|+|+|++|++|+.||.|++||+.... ..
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 99873100 001789999999999995 456667788899999999999999999999999999999995433 33
Q ss_pred eeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceeee----------------eeeeeeeeeceEEE
Q 016257 280 HWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQIY----------------SLLLALFLASAVVF 343 (392)
Q Consensus 280 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~ 343 (392)
..+ .+ ...|.+++|+|++++++++ .|+.|++|++..........+. ............++
T Consensus 250 ~~~--~~-~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~ 325 (343)
T 2xzm_R 250 REF--DA-GSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLF 325 (343)
T ss_dssp EEE--EC-SSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEE
T ss_pred eee--cC-CCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEE
Confidence 333 23 5579999999999877655 5778999998755432211100 01111112344677
Q ss_pred Eeeecceeeeecccccc
Q 016257 344 YIFFENSDSFWNFPVAR 360 (392)
Q Consensus 344 ~~~~d~~i~~W~~~~~~ 360 (392)
+++.|+.|++|++.++.
T Consensus 326 sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 326 AGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEETTSEEEEEEEEEEE
T ss_pred EecCCceEEEEEEEccC
Confidence 88899999999998775
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.9e-43 Score=313.86 Aligned_cols=283 Identities=17% Similarity=0.210 Sum_probs=234.1
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeC------------------CCCC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDE------------------SEGD 65 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~------------------h~~~ 65 (392)
.++|.|++|+|+++ ++++|+ ++.+++|.+.... ....+.+ +...
T Consensus 64 ~~~V~~v~fspdg~---~la~g~-------~~~v~i~~~~~g~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 125 (393)
T 1erj_A 64 TSVVCCVKFSNDGE---YLATGC-------NKTTQVYRVSDGS--------LVARLSDDSAANKDPENLNTSSSPSSDLY 125 (393)
T ss_dssp SSCCCEEEECTTSS---EEEEEC-------BSCEEEEETTTCC--------EEEEECC-----------------CCCCB
T ss_pred CCEEEEEEECCCCC---EEEEEc-------CCcEEEEEecCCC--------EEEEecCccccccccccccccccCCCcee
Confidence 46799999999984 466443 4568888875321 1222222 2335
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc
Q 016257 66 PMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR 145 (392)
Q Consensus 66 v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 145 (392)
|.+++|+|++++|++|+.|+.|++||+.+++....+. .|...|.+++|+|++++|++++.|++|++||+++++
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ-------GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-------cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 9999999999999999999999999998876544332 377899999999999999999999999999999988
Q ss_pred eeecccCCCCcEEEEEecC-CCCeEEEEcCCCcEEEEECCCCeeeEEEe------cCCCcceEEEEecCCCCcceEEEEE
Q 016257 146 IILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFLT------RNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 146 ~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
....+ .++..+.+++|+| ++++|++++.|+.|++||+++++.+..+. ..+...|.+++|+|++.. ++
T Consensus 199 ~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-----l~ 272 (393)
T 1erj_A 199 CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-----VV 272 (393)
T ss_dssp EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE-----EE
T ss_pred eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE-----EE
Confidence 76544 3556899999999 89999999999999999999988877663 234568999999999987 79
Q ss_pred EeCCccEEEEEeCCCce------------eeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccc
Q 016257 219 QRGDKALLAVYDISTWN------------KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLH 286 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 286 (392)
+++.|+.|++||+++.. +...+..|...|.+++|+|++.+|++|+.|+.|++||+++++.+..+ .+|
T Consensus 273 s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l-~~h 351 (393)
T 1erj_A 273 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML-QGH 351 (393)
T ss_dssp EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE-ECC
T ss_pred EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE-CCC
Confidence 99999999999997632 34456778889999999999999999999999999999999887766 588
Q ss_pred cCcceEEEEEee------CCCeEEEEeCCCeEEEEEeec
Q 016257 287 LGTSIALVEFCP------TQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 287 ~~~~i~~~~~s~------~~~~l~~~~~dg~i~iw~~~~ 319 (392)
...|.+++|++ ++++|++|+.||.|++|++..
T Consensus 352 -~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 352 -RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp -SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred -CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 89999999986 688999999999999999874
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-43 Score=307.78 Aligned_cols=290 Identities=15% Similarity=0.140 Sum_probs=219.1
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEe-eC-CCCCeeEEEEcCCCCeEEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVF-DE-SEGDPMTIAVNPSGDDFVCS 81 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~sp~~~~l~~~ 81 (392)
.++|++++|+|+ ++++|+. ++.|++|++.... ......+ .+ |.+.|.+++|+|++++|++|
T Consensus 14 ~~~v~~~~~s~~-----~las~~~------D~~i~lw~~~~~~------~~~~~~~~~~~h~~~v~~v~~sp~~~~las~ 76 (330)
T 2hes_X 14 KEKIWSFDFSQG-----ILATGST------DRKIKLVSVKYDD------FTLIDVLDETAHKKAIRSVAWRPHTSLLAAG 76 (330)
T ss_dssp SSCEEEEEEETT-----EEEEEES------SSCEEEEECSSSC------CEEEEEECTTCCCSCEEEEEECTTSSEEEEE
T ss_pred CCceeeeccCCC-----EEEEEcC------CCEEEEEEecCCC------eEEEEEEecCCccCCEEEEEECCCCCEEEEE
Confidence 568999999986 4565544 6779999986431 1222334 34 99999999999999999999
Q ss_pred eCCCeEEEEEEeCCccc---eeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCC----ceeecccCCC
Q 016257 82 TTNGGCKLFEVYGGATD---INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL----RIILDEPKAH 154 (392)
Q Consensus 82 ~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~ 154 (392)
+.|++|++|++...... ..... ....|...|.+++|+|++++|++|+.|++|++||++.. +.+..+..|.
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~---~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLA---IIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEE---EEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred eCCCcEEEEEcccCcCccccceeEE---EEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 99999999998643210 01000 01247889999999999999999999999999999432 3455567788
Q ss_pred CcEEEEEecCCCCeEEEEcCCCcEEEEECCCC--eeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCC
Q 016257 155 KSVLDMDFSLDSEFLATTSTDGSARIWKTEDG--VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS 232 (392)
Q Consensus 155 ~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 232 (392)
..|.+++|+|++++|++++.|++|++||.+++ +++..+..| ...|.+++|+|++.... +++++.|+.|++||++
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~---l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGH-EGTVWSSDFDKTEGVFR---LCSGSDDSTVRVWKYM 229 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCSSSSCE---EEEEETTSCEEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCC-CCcEEEEEecCCCCeeE---EEEEeCCCeEEEEEec
Confidence 89999999999999999999999999999776 566666655 45899999999843211 7899999999999997
Q ss_pred Cc--------eeeeeecc-cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCce--eeeeeeccccCc-ceEEEEEee--
Q 016257 233 TW--------NKIGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME--INHWSKRLHLGT-SIALVEFCP-- 298 (392)
Q Consensus 233 ~~--------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~-~i~~~~~s~-- 298 (392)
.+ .....+.. |...|.+++|++++ +|++++.||.|++||..+++ ........| .. .|.+++|+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h-~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCH-GVYEINVVKWLELN 307 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTT-TTSCEEEEEEC---
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccc-ccceEEEEEEecCC
Confidence 64 23334443 78899999999765 88999999999999998874 232333467 55 899999999
Q ss_pred CCCeEEEEeCCCeEEEEEeec
Q 016257 299 TQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 299 ~~~~l~~~~~dg~i~iw~~~~ 319 (392)
++++|++|+.||.|++|++..
T Consensus 308 ~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 308 GKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp --CCEEEEETTSEEEEEEC--
T ss_pred CceEEEEecCCCcEEEEEecc
Confidence 788999999999999999863
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-43 Score=313.85 Aligned_cols=289 Identities=10% Similarity=0.140 Sum_probs=222.0
Q ss_pred eCCCCCeeEEEEcCCCCeEEEEeC------CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC
Q 016257 60 DESEGDPMTIAVNPSGDDFVCSTT------NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (392)
Q Consensus 60 ~~h~~~v~~~~~sp~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (392)
..|+..|++++|+|||++|++++. |+.+++|+..++.....+.. ....|...|.+++|+|++. +++++.|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~---~~~~~~~~V~~~~~s~d~~-~l~~s~d 114 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT---AGVQTEAGVTDVAWVSEKG-ILVASDS 114 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS---EEEECSSCEEEEEEETTTE-EEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec---ccCCCCCCEEEEEEcCCCC-EEEEECC
Confidence 469999999999999999999997 67888888766653322211 1224778899999999985 5567889
Q ss_pred CcEEEEeCCCCceeec----ccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCC
Q 016257 134 GHLRIMHWPSLRIILD----EPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209 (392)
Q Consensus 134 g~i~i~d~~~~~~~~~----~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 209 (392)
|+|++||+.+++.... ...|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+. ..|.+++|+|++
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~-~~v~~v~~s~~~ 193 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS-SEVNCVAACPGK 193 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTC
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC-CCEEEEEEccCC
Confidence 9999999988765432 23567799999999999999999999999999999999998887664 479999999998
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCceeeeeec--ccCCCcEEEEECCC-CCEEEEEeCCCcEEEEecCCceeeeeeeccc
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKR--LLRKPASVLSISLD-GKYLAMGSKDGDICVVDVKKMEINHWSKRLH 286 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 286 (392)
... +++++.|+.|++||+++++....+. .+...+.+++|+|+ +.+|++|+.|+.|++||+++++....+ ..|
T Consensus 194 ~~~----~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~-~~~ 268 (357)
T 4g56_B 194 DTI----FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS-AVH 268 (357)
T ss_dssp SSC----EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE-CCC
T ss_pred Cce----eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE-ecc
Confidence 642 6888999999999999988765543 45678999999997 578999999999999999999887766 577
Q ss_pred cCcceEEEEEeeCC-CeEEEEeCCCeEEEEEeecCccccceeeeeeeeeee---eeceEEEEeeecceeeeeccccc
Q 016257 287 LGTSIALVEFCPTQ-RVVLTASKEWGAMITKLTVPADWKEWQIYSLLLALF---LASAVVFYIFFENSDSFWNFPVA 359 (392)
Q Consensus 287 ~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~i~~W~~~~~ 359 (392)
...|++++|+|++ ++|++|+.|++|+|||++..+........-.+.... .....+++++.|++|++|+++..
T Consensus 269 -~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 269 -SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp -SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred -ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 8899999999987 579999999999999998654332221111111111 13457788899999999998754
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=311.20 Aligned_cols=286 Identities=9% Similarity=0.063 Sum_probs=222.1
Q ss_pred CCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccc----eeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcE
Q 016257 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD----INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHL 136 (392)
Q Consensus 61 ~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 136 (392)
.|...|.+++|+|||++|++++ |+++++||....... ............+...|.+++|+|++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4677899999999999998877 667888875321100 00000011112245789999999986 78899999999
Q ss_pred EEEeCCCCceeec----ccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcc
Q 016257 137 RIMHWPSLRIILD----EPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 137 ~i~d~~~~~~~~~----~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
++||+++++.... ..+|.+.|++++|+|++++|++++.|++|++||+++++++..+..|. ..|.+++|+|++..+
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~-~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA-AQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC-CceEEEEecCCCCCc
Confidence 9999998875433 33677899999999999999999999999999999999999988765 489999999998752
Q ss_pred eEEEEEEeCCccEEEEEeCCCceeeeeec--ccCCCcEEEEECCC-CCEEEEEeCCCcEEEEecCCceeeeeeeccccCc
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNKIGHKR--LLRKPASVLSISLD-GKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGT 289 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 289 (392)
+++++.|+.|++||+++++....+. .+...+.+++|+|+ +++|++|+.||.|++||+++++.+..+ .+| ..
T Consensus 185 ----l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~-~~h-~~ 258 (344)
T 4gqb_B 185 ----FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS-AVH-SQ 258 (344)
T ss_dssp ----EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE-ECC-SS
T ss_pred ----eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE-cCC-CC
Confidence 5789999999999999988876654 34567899999995 578999999999999999999988776 588 89
Q ss_pred ceEEEEEeeCC-CeEEEEeCCCeEEEEEeecCcccc-------ceeeeeeeeeeeeeceEEEEeeecceeeeeccccc
Q 016257 290 SIALVEFCPTQ-RVVLTASKEWGAMITKLTVPADWK-------EWQIYSLLLALFLASAVVFYIFFENSDSFWNFPVA 359 (392)
Q Consensus 290 ~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~ 359 (392)
.|++++|+|++ ++|++|+.|++|++||+...+... +..+.+.+. ....+++++.|++|++|+++..
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~----~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPL----NHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSS----STTEEEEEETTSCEEEEECCC-
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCC----CCeEEEEEcCCCeEEEEECCCC
Confidence 99999999998 579999999999999987654322 112222221 1234567889999999999754
No 27
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-44 Score=321.71 Aligned_cols=300 Identities=14% Similarity=0.171 Sum_probs=243.5
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCC----CCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEE
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSR----ASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVC 80 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~----~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 80 (392)
.+|.+++|+|++.. ++++|...+ ..+.++.|++|+++..... .... ...|...|.+++|+|++++|++
T Consensus 13 ~~v~~~~~sp~g~~--~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~-----~~~~-~~~~~~~v~~~~~s~~~~~l~~ 84 (416)
T 2pm9_A 13 SRTATFAWSHDKIP--LLVSGTVSGTVDANFSTDSSLELWSLLAADSE-----KPIA-SLQVDSKFNDLDWSHNNKIIAG 84 (416)
T ss_dssp EESCBCCBCSSSSC--EEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC-----SCSC-CCCCSSCEEEEEECSSSSCEEE
T ss_pred hhcceEeeCCCCCC--EEEEEecCcccccccCCCCeEEEEEccCCCCC-----cEEE-EEecCCceEEEEECCCCCeEEE
Confidence 47899999999753 677764432 0146888999998743211 0111 2258899999999999999999
Q ss_pred EeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC-CCEEEEEeCCCcEEEEeCCCCc------eeec---c
Q 016257 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLR------IILD---E 150 (392)
Q Consensus 81 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~------~~~~---~ 150 (392)
++.|+.|++|++.......... .....|...|.+++|+|+ +++|++++.|+.|++||+++++ .... .
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 161 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSM---ARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS 161 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEE---EECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS
T ss_pred EccCCeEEEeecccccccccch---hhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc
Confidence 9999999999998722111011 011237789999999998 8999999999999999998876 3322 2
Q ss_pred cCCCCcEEEEEecCC-CCeEEEEcCCCcEEEEECCCCeeeEEEecCC-----CcceEEEEecCCCCcceEEEEEEeCCcc
Q 016257 151 PKAHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNS-----DEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (392)
Q Consensus 151 ~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~d~ 224 (392)
..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+. ...+.+++|+|++... +++++.++
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----l~~~~~d~ 237 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTR----VATATGSD 237 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTE----EEEEECCS
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCE----EEEEECCC
Confidence 456678999999998 7899999999999999999999988887653 5689999999998542 67788888
Q ss_pred ---EEEEEeCCCc-eeeeeec-ccCCCcEEEEECC-CCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEee
Q 016257 225 ---LLAVYDISTW-NKIGHKR-LLRKPASVLSISL-DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP 298 (392)
Q Consensus 225 ---~i~v~d~~~~-~~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 298 (392)
.|++||++++ +++..+. .|...+.+++|+| ++++|++++.||.|++||+++++.+..+ ..| ...|.+++|+|
T Consensus 238 ~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~-~~~-~~~v~~~~~s~ 315 (416)
T 2pm9_A 238 NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF-PAR-GNWCFKTKFAP 315 (416)
T ss_dssp SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE-ECS-SSCCCCEEECT
T ss_pred CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee-cCC-CCceEEEEECC
Confidence 9999999986 5666677 7899999999999 9999999999999999999999888776 477 88999999999
Q ss_pred CC-CeEEEEeCCCeEEEEEeecCc
Q 016257 299 TQ-RVVLTASKEWGAMITKLTVPA 321 (392)
Q Consensus 299 ~~-~~l~~~~~dg~i~iw~~~~~~ 321 (392)
++ .+|++++.||.|++|++....
T Consensus 316 ~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 316 EAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp TCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCCEEEEEecCCcEEEEEccCCC
Confidence 99 799999999999999998654
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.7e-42 Score=301.43 Aligned_cols=291 Identities=10% Similarity=0.111 Sum_probs=230.4
Q ss_pred CceeeeecC-----CC-CCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCe
Q 016257 4 GGTVTCGSW-----IK-RPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDD 77 (392)
Q Consensus 4 ~~~v~~~~w-----~~-~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 77 (392)
..+|++++| ++ ++ .++++|+. |+.|++|++....... ........+.+|...|.+++|+|++.+
T Consensus 21 ~~~V~~~~~~~s~~~~~d~---~~l~sgs~------D~~v~iWd~~~~~~~~-~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 21 SDWVTSIVAGFSQKENEDS---PVLISGSR------DKTVMIWKLYEEEQNG-YFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp SSCEEEEEECCCSSTTCCC---CEEEEEET------TSCEEEEEECSSCCSS-BSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred hhhhhheeeEEEeecCCCC---CEEEEEcC------CCEEEEEECCcCCccc-ccccccchhccCCCceEEEEECCCCCE
Confidence 468999999 65 54 45666555 7779999987432111 123445678999999999999999999
Q ss_pred EEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeec--ccCCCC
Q 016257 78 FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD--EPKAHK 155 (392)
Q Consensus 78 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~ 155 (392)
|++++.|++|++||+.+++....+. .|...|.+++|+|++++|++++.|++|++||+........ ...|..
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~-------~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFV-------GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD 163 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEE-------CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSS
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEc-------CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCc
Confidence 9999999999999998877554443 3778999999999999999999999999999974332221 125666
Q ss_pred cEEEEEecCCC----------CeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccE
Q 016257 156 SVLDMDFSLDS----------EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (392)
Q Consensus 156 ~i~~i~~~~~~----------~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~ 225 (392)
.|.+++|+|++ .+|++++.|+.|++||. ..+....+..| ...|.+++|+|+++. +++++.|+.
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h-~~~v~~~~~s~~g~~-----l~sgs~dg~ 236 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAH-ESNVNHLSISPNGKY-----IATGGKDKK 236 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECC-SSCEEEEEECTTSSE-----EEEEETTCE
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCc-cccceEEEECCCCCE-----EEEEcCCCe
Confidence 89999999987 68999999999999994 55666666655 458999999999997 899999999
Q ss_pred EEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeee--eee----------ccccCcceEE
Q 016257 226 LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH--WSK----------RLHLGTSIAL 293 (392)
Q Consensus 226 i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~----------~~~~~~~i~~ 293 (392)
|++||++..........+...|.+++|+|++.+++++ .|+.|++||+.+++... .+. .+| ...|.+
T Consensus 237 v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~ 314 (343)
T 2xzm_R 237 LLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGK-NPQCTS 314 (343)
T ss_dssp EEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCS-CCCEEE
T ss_pred EEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCC-CCceEE
Confidence 9999995443322223345679999999999988765 47789999998766433 221 146 678999
Q ss_pred EEEeeCCCeEEEEeCCCeEEEEEeecC
Q 016257 294 VEFCPTQRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 294 ~~~s~~~~~l~~~~~dg~i~iw~~~~~ 320 (392)
++|+|+|++|++|+.||.|++|++..+
T Consensus 315 ~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 315 LAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred EEECCCCCeEEEecCCceEEEEEEEcc
Confidence 999999999999999999999998753
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.2e-43 Score=315.24 Aligned_cols=292 Identities=12% Similarity=0.132 Sum_probs=238.6
Q ss_pred CCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe
Q 016257 52 SPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131 (392)
Q Consensus 52 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 131 (392)
.......+.+|.+.|++++|+|++++|++|+.|++|+|||+.+++....+. .|...|.+++|+|++++|++|+
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~-------~h~~~v~~~~~s~~g~~las~~ 127 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK-------LHCPWVMECAFAPNGQSVACGG 127 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-------CCCTTCCCCEECTTSSEEEECC
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe-------cCCCCEEEEEECCCCCEEEEee
Confidence 345667899999999999999999999999999999999998876554443 2667899999999999999999
Q ss_pred CCCcEEEEeCCCCc-------eeecccCCCCcEEEEEecCCC-CeEEEEcCCCcEEEEECCCCeeeEEEe----cCCCcc
Q 016257 132 VDGHLRIMHWPSLR-------IILDEPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLT----RNSDEK 199 (392)
Q Consensus 132 ~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~----~~~~~~ 199 (392)
.|+.+++|++.+.. ....+.+|.+.+.++.|+|++ ..|++++.|++|++||+++++.+..+. ..+...
T Consensus 128 ~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~ 207 (380)
T 3iz6_a 128 LDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTAD 207 (380)
T ss_dssp SSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSC
T ss_pred CCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccC
Confidence 99999999986532 223456777789999999964 579999999999999999998887763 234557
Q ss_pred eEEEEecC-CCCcceEEEEEEeCCccEEEEEeCC-CceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCce
Q 016257 200 IELCRFSK-DGTKPFLFCTVQRGDKALLAVYDIS-TWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME 277 (392)
Q Consensus 200 v~~~~~~~-~~~~~~~~~~~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 277 (392)
+.+++|++ ++.. +++++.|+.|++||++ ..+.+..+..|...|.+++|+|++++|++|+.||+|++||+++++
T Consensus 208 v~~~~~~~~~~~~-----l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 208 VLSLSINSLNANM-----FISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp EEEEEECSSSCCE-----EEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred eEEEEeecCCCCE-----EEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 99999987 5554 7899999999999998 456777888999999999999999999999999999999999998
Q ss_pred eeeeeecccc-----CcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcccc------------ceeeeeeeeeeeeece
Q 016257 278 INHWSKRLHL-----GTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWK------------EWQIYSLLLALFLASA 340 (392)
Q Consensus 278 ~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~------------~~~~~~~~~~~~~~~~ 340 (392)
.+..+..... ...|++++|+|+|++|++|+.||.|++||+....... +..+.+.+ ...
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~-----dg~ 357 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSS-----DGS 357 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECS-----SSS
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECC-----CCC
Confidence 7766532110 2348999999999999999999999999986443221 22222222 345
Q ss_pred EEEEeeecceeeeecccccc
Q 016257 341 VVFYIFFENSDSFWNFPVAR 360 (392)
Q Consensus 341 ~~~~~~~d~~i~~W~~~~~~ 360 (392)
.+++++.|+.|++|++...+
T Consensus 358 ~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 358 ALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEEECTTSCEEEEECCSSS
T ss_pred EEEEeeCCCCEEEEecCCCc
Confidence 77888899999999987554
No 30
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.7e-42 Score=301.48 Aligned_cols=324 Identities=12% Similarity=0.117 Sum_probs=255.3
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|.+++|+|++. +++.+.... .+..|... .........+|.+.|++++|+|++++|++++
T Consensus 9 ~~~v~~~~~s~dg~---~~~~~~~~~------~~~~~~~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~- 70 (337)
T 1gxr_A 9 SKPAYSFHVTADGQ---MQPVPFPPD------ALIGPGIP--------RHARQINTLNHGEVVCAVTISNPTRHVYTGG- 70 (337)
T ss_dssp EEECCEEEECSSSC---EEECCCCTT------SSSSTTCC--------SEEEEEEEECCSSCCCEEEECSSSSEEEEEC-
T ss_pred CCceeEEEECCCCC---EEEeecCCC------cEeccccC--------CccccceeccCCCceEEEEEecCCcEEEEcC-
Confidence 56899999999984 455444322 12222111 2222334457999999999999999999998
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc--eeecccCCCCcEEEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR--IILDEPKAHKSVLDMD 161 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~i~ 161 (392)
|+.|++|++.+.+....... .....|...|.+++|+|++++|++++.|+.|++||+++++ ....+..+...|.+++
T Consensus 71 dg~i~iw~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 148 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQ--LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA 148 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEE--EECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEE
T ss_pred CCeEEEEECCCCCceeeeec--ccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEE
Confidence 99999999987653322221 1112477899999999999999999999999999999877 4555666777899999
Q ss_pred ecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeec
Q 016257 162 FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR 241 (392)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~ 241 (392)
|+|+++++++++.|+.|++||+++++....+..+. ..+.+++|+|++.. +++++.|+.|++||+++++.+..+.
T Consensus 149 ~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~-----l~~~~~dg~i~~~d~~~~~~~~~~~ 222 (337)
T 1gxr_A 149 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISNDGTK-----LWTGGLDNTVRSWDLREGRQLQQHD 222 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCceeeeeeccc-CceEEEEECCCCCE-----EEEEecCCcEEEEECCCCceEeeec
Confidence 99999999999999999999999999888887654 47999999999987 7889999999999999988876654
Q ss_pred ccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCc
Q 016257 242 LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPA 321 (392)
Q Consensus 242 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 321 (392)
+...+.+++|+|++++|++++.|+.|++||+++++.... ..| ...|.+++|+|++++|++++.||.|++|++....
T Consensus 223 -~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~--~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 223 -FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL--HLH-ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE--CCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred -CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE--cCC-ccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 577899999999999999999999999999999876543 467 8899999999999999999999999999998665
Q ss_pred cccceeeeeeeeee--eeeceEEEEeeecceeeeeccc
Q 016257 322 DWKEWQIYSLLLAL--FLASAVVFYIFFENSDSFWNFP 357 (392)
Q Consensus 322 ~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~i~~W~~~ 357 (392)
..........+... ......+++++.|+.|++|++.
T Consensus 299 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 299 SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 43211111111111 1234467778899999999974
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-42 Score=298.71 Aligned_cols=292 Identities=11% Similarity=0.057 Sum_probs=221.9
Q ss_pred ceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC
Q 016257 54 LVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (392)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (392)
.....+.+|.+.|.+++|+|+ +|++|+.|++|++|++..+....... .....|...|.+++|+|++++|++|+.|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~---~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDV---LDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEE---ECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEE---EecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 345678899999999999987 99999999999999997653211110 1111378899999999999999999999
Q ss_pred CcEEEEeCCC-------CceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCC----eeeEEEecCCCcceEE
Q 016257 134 GHLRIMHWPS-------LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG----VAWTFLTRNSDEKIEL 202 (392)
Q Consensus 134 g~i~i~d~~~-------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~~v~~ 202 (392)
++|++||++. .+....+..|...|.+++|+|++++|++++.|++|++||++.. +++..+..| ...|.+
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~ 158 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH-SQDVKH 158 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC-SSCEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC-CCceEE
Confidence 9999999853 2345556778889999999999999999999999999999532 345555554 458999
Q ss_pred EEecCCCCcceEEEEEEeCCccEEEEEeCCCc--eeeeeecccCCCcEEEEECCC--CCEEEEEeCCCcEEEEecCCc--
Q 016257 203 CRFSKDGTKPFLFCTVQRGDKALLAVYDISTW--NKIGHKRLLRKPASVLSISLD--GKYLAMGSKDGDICVVDVKKM-- 276 (392)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~-- 276 (392)
++|+|++.. +++++.|+.|++||.+++ +++..+..|...|.+++|+|+ +.+|++++.|++|++||+.++
T Consensus 159 v~~~p~~~~-----l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 233 (330)
T 2hes_X 159 VIWHPSEAL-----LASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233 (330)
T ss_dssp EEECSSSSE-----EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred EEECCCCCE-----EEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence 999999987 899999999999998765 567788899999999999998 779999999999999999765
Q ss_pred ------eeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee-----eeeeeee-ee---eceE
Q 016257 277 ------EINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI-----YSLLLAL-FL---ASAV 341 (392)
Q Consensus 277 ------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~~~~-~~---~~~~ 341 (392)
.....+...| ...|.+++|++++ +|++++.||.|++|+............ ...+... +. ....
T Consensus 234 ~~~~~~~~~~~~~~~h-~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~ 311 (330)
T 2hes_X 234 DDQQEWVCEAILPDVH-KRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTI 311 (330)
T ss_dssp TSCEEEEEEEECCSCC-SSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CC
T ss_pred cccceeEEeeeccccc-ccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceE
Confidence 2333333347 8899999999665 899999999999999875421000000 0011111 11 2346
Q ss_pred EEEeeecceeeeecccc
Q 016257 342 VFYIFFENSDSFWNFPV 358 (392)
Q Consensus 342 ~~~~~~d~~i~~W~~~~ 358 (392)
+++++.|+.|++|++..
T Consensus 312 las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 312 LATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEETTSEEEEEEC--
T ss_pred EEEecCCCcEEEEEecc
Confidence 78888999999999763
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.8e-42 Score=323.08 Aligned_cols=309 Identities=15% Similarity=0.211 Sum_probs=253.8
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
..+|.+++|+|++. .+++++. ++.+++|+.+ ......+.+|...|.+++|+|+++.|++++.
T Consensus 262 ~~~v~~v~~~~d~~---~l~~~~~------d~~i~~w~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~ 323 (577)
T 2ymu_A 262 SSSVNGVAFRPDGQ---TIASASD------DKTVKLWNRN---------GQLLQTLTGHSSSVWGVAFSPDGQTIASASD 323 (577)
T ss_dssp SSCEEEEEECTTSS---EEEEEET------TSCEEEEETT---------SCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEEcCCCC---EEEEEeC------CCEEEEEeCC---------CcEEEEEecCCCCeEEEEECCCCCEEEEEeC
Confidence 56899999999984 3554443 5668888743 2334567899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|+.|++||...... ..+ ..|...+.+++|+|++++|++++.|+.|++||. +++.+..+..|...|.+++|+
T Consensus 324 d~~i~~w~~~~~~~-~~~-------~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s 394 (577)
T 2ymu_A 324 DKTVKLWNRNGQHL-QTL-------TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS 394 (577)
T ss_dssp TSCEEEEETTSCEE-EEE-------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEEC
T ss_pred CCeEEEEeCCCCee-EEE-------eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEEC
Confidence 99999999765432 221 136789999999999999999999999999995 567777777888899999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeeccc
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL 243 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~ 243 (392)
|++++|++++.|+.|++||. +++.+..+..+. ..|.+++|+|+++. +++++.|+.|++||.. ++.+..+..|
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~-~~v~~~~~s~d~~~-----l~~~~~d~~v~~w~~~-~~~~~~~~~~ 466 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVWGVAFSPDDQT-----IASASDDKTVKLWNRN-GQLLQTLTGH 466 (577)
T ss_dssp TTSSCEEEEETTSEEEEECT-TCCEEEEEECCS-SCEEEEEECTTSSE-----EEEEETTSEEEEEETT-SCEEEEEECC
T ss_pred CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCC-CCeEEEEECCCCCE-----EEEEcCCCEEEEEECC-CCEEEEEcCC
Confidence 99999999999999999996 566777776654 57999999999997 7899999999999974 5677788889
Q ss_pred CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCc--
Q 016257 244 RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPA-- 321 (392)
Q Consensus 244 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-- 321 (392)
...|++++|+|++++|++++.|+.|++||. +++.+..+ .+| ...|++++|+|+|++|++++.||.|++|+.....
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~-~~h-~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~ 543 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL-TGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ 543 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEE-ECC-SSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEE-eCC-CCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEE
Confidence 999999999999999999999999999995 56666655 578 8999999999999999999999999999964211
Q ss_pred -----cccceeeeeeeeeeeeeceEEEEeeecceeeeec
Q 016257 322 -----DWKEWQIYSLLLALFLASAVVFYIFFENSDSFWN 355 (392)
Q Consensus 322 -----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~ 355 (392)
.-.++.+.+.+ ....+++++.|++|++||
T Consensus 544 ~~~~h~~~v~~~~fs~-----dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 544 TLTGHSSSVWGVAFSP-----DGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEECCSSCEEEEEECT-----TSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCCEEEEEEcC-----CCCEEEEEeCCCEEEEeC
Confidence 11122333332 334677888999999997
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-41 Score=294.44 Aligned_cols=291 Identities=16% Similarity=0.193 Sum_probs=237.5
Q ss_pred CCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe
Q 016257 52 SPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131 (392)
Q Consensus 52 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 131 (392)
.......+.+|.+.|++++|+|++++|++++.|+.|++|++.+++....+. .|...|.+++|+|++++|++++
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~ 84 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-------GHKLGISDVAWSSDSNLLVSAS 84 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEE
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc-------cCCCceEEEEEcCCCCEEEEEC
Confidence 345667889999999999999999999999999999999998776544332 3678999999999999999999
Q ss_pred CCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCc
Q 016257 132 VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTK 211 (392)
Q Consensus 132 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 211 (392)
.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+. ..+.+++|+|++..
T Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~ 163 (312)
T 4ery_A 85 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSL 163 (312)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSE
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCC-CcEEEEEEcCCCCE
Confidence 99999999999999888888888899999999999999999999999999999999888887654 47999999999986
Q ss_pred ceEEEEEEeCCccEEEEEeCCCceeeeeec-ccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcc
Q 016257 212 PFLFCTVQRGDKALLAVYDISTWNKIGHKR-LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTS 290 (392)
Q Consensus 212 ~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 290 (392)
+++++.|+.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||+++++....+ ..| ...
T Consensus 164 -----l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~-~~~ 236 (312)
T 4ery_A 164 -----IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY-TGH-KNE 236 (312)
T ss_dssp -----EEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE-CSS-CCS
T ss_pred -----EEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-Eec-CCc
Confidence 7899999999999999988776654 45568999999999999999999999999999999887766 344 332
Q ss_pred ---eEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee---eeeeeeeeeeceEEEEee--ecceeeeeccc
Q 016257 291 ---IALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI---YSLLLALFLASAVVFYIF--FENSDSFWNFP 357 (392)
Q Consensus 291 ---i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~d~~i~~W~~~ 357 (392)
+......+++.+|++|+.||.|++|++........... .............+++++ .|+.|++|+..
T Consensus 237 ~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 237 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 22233346788999999999999999986543322210 011111112334555555 58999999864
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-41 Score=304.18 Aligned_cols=288 Identities=15% Similarity=0.162 Sum_probs=230.3
Q ss_pred CCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCC-----------CCCCCCCeEEEEecCCCCEEEE
Q 016257 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMP-----------PLQDAGPQKCLSFSVDGSRFAA 129 (392)
Q Consensus 61 ~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-----------~~~~~~~v~~~~~s~~~~~l~~ 129 (392)
+|.+.|.+++|+|+|++|++|+ ++.+++|++.+++....+...... ...+...|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999976 678999999887755443321100 0012335899999999999999
Q ss_pred EeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecC-C
Q 016257 130 GGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK-D 208 (392)
Q Consensus 130 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~ 208 (392)
|+.|+.|++||+++++....+..|...|.+++|+|++++|++++.|++|++||+++++....+.. ...+.+++|+| +
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~ 218 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI--EDGVTTVAVSPGD 218 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEECSTT
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc--CCCcEEEEEECCC
Confidence 99999999999999998888888888999999999999999999999999999999988877763 34699999999 7
Q ss_pred CCcceEEEEEEeCCccEEEEEeCCCceeeeee-------cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCcee---
Q 016257 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGHK-------RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI--- 278 (392)
Q Consensus 209 ~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--- 278 (392)
+.. +++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|++|+.|+.|++||+++...
T Consensus 219 ~~~-----l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 219 GKY-----IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 293 (393)
T ss_dssp CCE-----EEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred CCE-----EEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 776 789999999999999998776655 46788999999999999999999999999999976432
Q ss_pred ---------eeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccce--------eeeeeeeeee-eece
Q 016257 279 ---------NHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEW--------QIYSLLLALF-LASA 340 (392)
Q Consensus 279 ---------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--------~~~~~~~~~~-~~~~ 340 (392)
... ..+| ...|.+++|+|++++|++|+.|+.|++|++..+...... .+.+.....+ ....
T Consensus 294 ~~~~~~~~~~~~-~~~h-~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~ 371 (393)
T 1erj_A 294 SKTPNSGTCEVT-YIGH-KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYN 371 (393)
T ss_dssp -------CEEEE-EECC-SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCE
T ss_pred ccCCCCCcceEE-Eecc-cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCC
Confidence 222 2578 889999999999999999999999999998765543222 1111110000 1235
Q ss_pred EEEEeeecceeeeecccc
Q 016257 341 VVFYIFFENSDSFWNFPV 358 (392)
Q Consensus 341 ~~~~~~~d~~i~~W~~~~ 358 (392)
.+++++.|+.|++|++..
T Consensus 372 ~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 372 VFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEEETTSEEEEEEEEE
T ss_pred EEEEECCCCcEEECcccc
Confidence 678888999999999864
No 35
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.2e-41 Score=294.07 Aligned_cols=298 Identities=19% Similarity=0.207 Sum_probs=240.6
Q ss_pred ceEEEeeCCCCCeeEEEEcCC-CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC
Q 016257 54 LVTYVFDESEGDPMTIAVNPS-GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV 132 (392)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~sp~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 132 (392)
.+..+|+||.+.|++++|+|+ +++|++|+.|++|+|||+...+......... ...|...|.+++|+|++++|++++.
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~--l~~h~~~V~~~~~s~dg~~l~s~~~ 106 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRA--LRGHSHFVSDVVISSDGQFALSGSW 106 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEE--ECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEE--EeCCCCCEEEEEECCCCCEEEEEcc
Confidence 456679999999999999997 6799999999999999998765432221111 1237889999999999999999999
Q ss_pred CCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcc
Q 016257 133 DGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 133 dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
|+.|++|+............+...+..+.+++++++|++++.|+.+++||+............+...+..++|++++...
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 99999999999888777777778899999999999999999999999999987766555555556689999999987653
Q ss_pred eEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceE
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~ 292 (392)
+ +++++.|+.|++||+++++.+..+..|...|++++|+|++++|++|+.||.|++||+++.+.+..+. + ...|.
T Consensus 187 ~---~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~-~~~v~ 260 (340)
T 4aow_A 187 I---IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--G-GDIIN 260 (340)
T ss_dssp E---EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--C-SSCEE
T ss_pred E---EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec--C-CceEE
Confidence 3 5788999999999999999999999999999999999999999999999999999999999887763 3 56899
Q ss_pred EEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee----------eeeee--eeeeeceEEEEeeecceeeeecccccc
Q 016257 293 LVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI----------YSLLL--ALFLASAVVFYIFFENSDSFWNFPVAR 360 (392)
Q Consensus 293 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----------~~~~~--~~~~~~~~~~~~~~d~~i~~W~~~~~~ 360 (392)
++.|+|++. +++++.|+.|++|+++.......... ...+. ........+++++.|+.|++|++.+|.
T Consensus 261 ~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 261 ALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 999999876 45666799999999875432111100 00011 111234477888899999999999885
No 36
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-41 Score=307.22 Aligned_cols=327 Identities=14% Similarity=0.131 Sum_probs=255.6
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEE----cCCCCccc--cCCceEEEee------CCCCCeeEEEEc
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSF----DPKTTSVY--TSPLVTYVFD------ESEGDPMTIAVN 72 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~----~~~~~~~~--~~~~~~~~~~------~h~~~v~~~~~s 72 (392)
++|++++|+|++.. ++++|+. ++.+++|.+ +....... ........+. +|.+.|++++|+
T Consensus 46 ~~v~~~~~s~~~~~--~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 46 DNIVSSTWNPLDES--ILAYGEK------NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS 117 (425)
T ss_dssp SCCSEEEECSSCTT--EEEEEET------BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC
T ss_pred CceEEEEECCCCCc--EEEEecC------CceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc
Confidence 68999999999852 4555544 677999999 53221000 0001111122 268899999999
Q ss_pred CCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccC
Q 016257 73 PSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK 152 (392)
Q Consensus 73 p~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 152 (392)
|++++|++++.|+.|++|| .+++....+. .|...|.+++|+|++++|++++.|+.|++||+++++....+..
T Consensus 118 ~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWN-KTGALLNVLN-------FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp TTSSEEEEEETTSCEEEEE-TTSCEEEEEC-------CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred CCCCEEEEEeCCCeEEEEe-CCCCeeeecc-------CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeec
Confidence 9999999999999999999 4443333222 3678999999999999999999999999999999988777666
Q ss_pred CCCc---------------EEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEE
Q 016257 153 AHKS---------------VLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCT 217 (392)
Q Consensus 153 ~~~~---------------i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 217 (392)
+... +.++.|+|++ .+++++.|+.|++||+++++.+..+..+ ...+.+++|+|++.. +
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~-----l 262 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNKL-----L 262 (425)
T ss_dssp C---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTTE-----E
T ss_pred cccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccC-CCceEEEEECCCCCE-----E
Confidence 6555 8999999975 5888999999999999999888887755 457999999999986 7
Q ss_pred EEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEe
Q 016257 218 VQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFC 297 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 297 (392)
++++.|+.|++||+++++.+..+..|...+.+++|+|++ ++++++.|+.|++||+++++....+ ..| ...|.+++|+
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-~~~-~~~i~~~~~s 339 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS-IVD-GVPIFAGRIS 339 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE-ECT-TCCEEEEEEC
T ss_pred EEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec-ccC-CccEEEEEEc
Confidence 889999999999999998888888899999999999999 9999999999999999999988776 467 7899999999
Q ss_pred eCCCeEEEEeCCCeEEEEEeecCc--------------------cccceeee--e-eeeeee--eeceEEEEeeecceee
Q 016257 298 PTQRVVLTASKEWGAMITKLTVPA--------------------DWKEWQIY--S-LLLALF--LASAVVFYIFFENSDS 352 (392)
Q Consensus 298 ~~~~~l~~~~~dg~i~iw~~~~~~--------------------~~~~~~~~--~-~~~~~~--~~~~~~~~~~~d~~i~ 352 (392)
|++++|++++.||.|++|++.... ........ . .+.... .....+++++.|+.|+
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 419 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGS 419 (425)
T ss_dssp TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCE
T ss_pred CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEE
Confidence 999999999999999999998655 11111110 0 111111 1334677888999999
Q ss_pred eeccc
Q 016257 353 FWNFP 357 (392)
Q Consensus 353 ~W~~~ 357 (392)
+|+++
T Consensus 420 iw~~~ 424 (425)
T 1r5m_A 420 VVAIP 424 (425)
T ss_dssp EEECC
T ss_pred EEeec
Confidence 99975
No 37
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.6e-41 Score=298.38 Aligned_cols=290 Identities=14% Similarity=0.179 Sum_probs=240.5
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
..+|++++|+|++. ++++|+. ++.|++|+++.. .......+.+|...|.+++|+|++++|++++.
T Consensus 8 ~~~i~~~~~s~~~~---~l~~~~~------d~~v~i~~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 72 (372)
T 1k8k_C 8 VEPISCHAWNKDRT---QIAICPN------NHEVHIYEKSGN------KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 72 (372)
T ss_dssp SSCCCEEEECTTSS---EEEEECS------SSEEEEEEEETT------EEEEEEEEECCSSCEEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEECCCCC---EEEEEeC------CCEEEEEeCCCC------cEEeeeeecCCCCcccEEEEeCCCCEEEEEcC
Confidence 57899999999984 4665544 677999998732 11255678899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCce---eec-ccCCCCcEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI---ILD-EPKAHKSVLD 159 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~-~~~~~~~i~~ 159 (392)
|+.|++||+.+++....... ..|...|.+++|+|++++|++++.|+.|++||++.++. ... ...|...|.+
T Consensus 73 dg~i~vwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTLVI-----LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp TSCEEEEEEETTEEEEEEEC-----CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred CCeEEEEECCCCeeeeeEEe-----ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 99999999988764333221 23678999999999999999999999999999987762 222 3455678999
Q ss_pred EEecCCCCeEEEEcCCCcEEEEECC------------------CCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeC
Q 016257 160 MDFSLDSEFLATTSTDGSARIWKTE------------------DGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221 (392)
Q Consensus 160 i~~~~~~~~l~~~~~d~~i~vwd~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (392)
++|+|++++|++++.|+.|++||++ .++.+..+..+ ...+.+++|+|++.. +++++
T Consensus 148 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-----l~~~~ 221 (372)
T 1k8k_C 148 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSANGSR-----VAWVS 221 (372)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECSSSSE-----EEEEE
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEEEEECCCCCE-----EEEEe
Confidence 9999999999999999999999954 56677777644 457999999999986 78999
Q ss_pred CccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCC--cee--e------------------
Q 016257 222 DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK--MEI--N------------------ 279 (392)
Q Consensus 222 ~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~--~~~--~------------------ 279 (392)
.|+.|++||+++++.+..+..+...+.+++|+|+++++++| .|+.|++|++.+ ++. .
T Consensus 222 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (372)
T 1k8k_C 222 HDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARE 300 (372)
T ss_dssp TTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHH
T ss_pred CCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhh
Confidence 99999999999999999999999999999999999988888 899999999988 431 0
Q ss_pred ------------------eeeeccccCcceEEEEEe-eCC---CeEEEEeCCCeEEEEEeecCc
Q 016257 280 ------------------HWSKRLHLGTSIALVEFC-PTQ---RVVLTASKEWGAMITKLTVPA 321 (392)
Q Consensus 280 ------------------~~~~~~~~~~~i~~~~~s-~~~---~~l~~~~~dg~i~iw~~~~~~ 321 (392)
..+..+| ...|++++|. ++| .+|++++.||.|++|++....
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 301 RFQNLDKKASSEGSAAAGAGLDSLH-KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp HHHHCCCCC---------CCCSSSS-SSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred hhhhcccccccccCccccccccccc-cCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 2222478 8899999977 566 899999999999999997543
No 38
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.1e-40 Score=290.90 Aligned_cols=286 Identities=14% Similarity=0.131 Sum_probs=241.9
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
..+|++++|+|++. ++++|+ ++.+++|+++..... .........+|...|.+++|+|++++|++++.
T Consensus 51 ~~~v~~~~~~~~~~---~l~~~~-------dg~i~iw~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 117 (337)
T 1gxr_A 51 GEVVCAVTISNPTR---HVYTGG-------KGCVKVWDISHPGNK---SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp SSCCCEEEECSSSS---EEEEEC-------BSEEEEEETTSTTCC---SCSEEEECSCTTSBEEEEEECTTSSEEEEEES
T ss_pred CCceEEEEEecCCc---EEEEcC-------CCeEEEEECCCCCce---eeeecccccCCCCcEEEEEEcCCCCEEEEEcC
Confidence 56899999999884 455332 567999998744311 22233333479999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|+.|++||+.+.+........ .|...+.+++|+|++++|++++.|+.|++||+++++....+..|...|.+++|+
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELT-----SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEE-----CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCcEEEEECCCCCcceeeecc-----cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 999999999887632222111 266789999999999999999999999999999998888888888899999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeeccc
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL 243 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~ 243 (392)
|++++|++++.|+.|++||+++++.+..+. +...+.+++|+|++.. +++++.++.|++||+++.+.. .+..|
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~-----l~~~~~~~~i~~~~~~~~~~~-~~~~~ 264 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD--FTSQIFSLGYCPTGEW-----LAVGMESSNVEVLHVNKPDKY-QLHLH 264 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECTTSSE-----EEEEETTSCEEEEETTSSCEE-EECCC
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeeec--CCCceEEEEECCCCCE-----EEEEcCCCcEEEEECCCCCeE-EEcCC
Confidence 999999999999999999999998887775 3457999999999987 788889999999999987654 56778
Q ss_pred CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 244 RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 244 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
...+.+++|+|++++|++++.||.|++||+.+++..... .| ...|.+++|+|++++|++++.||.|++|++.
T Consensus 265 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~--~~-~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS--KE-SSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--EC-SSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe--cC-CCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 899999999999999999999999999999998877543 46 7899999999999999999999999999974
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-40 Score=313.73 Aligned_cols=335 Identities=15% Similarity=0.172 Sum_probs=262.6
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|++++|+|++.. +++|+. ++.+++|+.+ ......+.+|...|.+++|+|+++.|++++.
T Consensus 221 ~~~v~~~~~s~dg~~---l~~~~~------d~~i~~w~~~---------~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~ 282 (577)
T 2ymu_A 221 SSSVRGVAFSPDGQT---IASASD------DKTVKLWNRN---------GQLLQTLTGHSSSVNGVAFRPDGQTIASASD 282 (577)
T ss_dssp SSCEEEEEECTTSSC---EEEEET------TSCEEEECTT---------SCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEECCCCCE---EEEEeC------CCEEEEEeCC---------CCEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Confidence 467999999999854 444443 5668888632 2344568899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|+.|++|+... +....+. .|...|.+++|+|++++|++++.|+.|++||... +.+..+..+...+.+++|+
T Consensus 283 d~~i~~w~~~~-~~~~~~~-------~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s 353 (577)
T 2ymu_A 283 DKTVKLWNRNG-QLLQTLT-------GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFS 353 (577)
T ss_dssp TSCEEEEETTS-CEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEEC
T ss_pred CCEEEEEeCCC-cEEEEEe-------cCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEEC
Confidence 99999999643 2222221 3678999999999999999999999999999765 4455667778899999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeeccc
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL 243 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~ 243 (392)
|++++|++++.|+.+++||. +++.+..+..+ ...|.+++|+|+++. +++++.|+.|++||. +++.+..+..|
T Consensus 354 ~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~-~~~v~~~~~s~dg~~-----l~~~~~d~~v~~~~~-~~~~~~~~~~~ 425 (577)
T 2ymu_A 354 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGH-SSSVRGVAFSPDGQT-----IASASDDKTVKLWNR-NGQLLQTLTGH 425 (577)
T ss_dssp TTSSEEEEEETTSEEEEEET-TCCEEEEEECC-SSCEEEEEECTTSSC-----EEEEETTSEEEEECT-TCCEEEEEECC
T ss_pred CCCCEEEEEeCCCEEEEEcC-CCCEEEEecCC-CCCeEEEEECCCCCE-----EEEEeCCCEEEEEeC-CCCEEEEecCC
Confidence 99999999999999999996 56777777665 457999999999997 789999999999996 45677788899
Q ss_pred CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccc
Q 016257 244 RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 244 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
...|++++|+|++++|++++.|+.|++||.. ++....+ ..| ...|++++|+|++++|++++.|+.|++|+.... ..
T Consensus 426 ~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~-~~~-~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~-~~ 501 (577)
T 2ymu_A 426 SSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTL-TGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-LL 501 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEE-ECC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSC-EE
T ss_pred CCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEE-cCC-CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC-EE
Confidence 9999999999999999999999999999975 4544444 578 889999999999999999999999999996422 11
Q ss_pred c--------ceeeeeeeeeeeeeceEEEEeeecceeeeeccccccccc-CCCCcccccCCCCCccccce
Q 016257 324 K--------EWQIYSLLLALFLASAVVFYIFFENSDSFWNFPVARNQH-GGPKIESILRDPQSSDDQNM 383 (392)
Q Consensus 324 ~--------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~ 383 (392)
. +..+.+.+ ....+++++.|+.|++||.. ++.+. ...+..++.....+.++..+
T Consensus 502 ~~~~~h~~~v~~l~~s~-----dg~~l~s~~~dg~v~lwd~~-~~~~~~~~~h~~~v~~~~fs~dg~~l 564 (577)
T 2ymu_A 502 QTLTGHSSSVRGVAFSP-----DGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTI 564 (577)
T ss_dssp EEEECCSSCEEEEEECT-----TSSCEEEEETTSEEEEECTT-SCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred EEEeCCCCCEEEEEEcC-----CCCEEEEEECcCEEEEEeCC-CCEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 1 11222222 33467788889999999964 43322 22334445555444554444
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4e-40 Score=293.34 Aligned_cols=246 Identities=11% Similarity=0.049 Sum_probs=214.4
Q ss_pred eeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCc--cceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcE
Q 016257 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGA--TDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHL 136 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 136 (392)
+..|.++|++++|+|++++|++++.|+.|++||+.+++ ....+. .|...|.+++|+|++++|++++.|+.|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~~~~~dg~i 76 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-------EHNGQVTGVDWAPDSNRIVTCGTDRNA 76 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-------CCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-------CCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence 45689999999999999999999999999999999875 333332 377899999999999999999999999
Q ss_pred EEEeCCCCceee--cccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCee---eEEEecCCCcceEEEEecCCCCc
Q 016257 137 RIMHWPSLRIIL--DEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA---WTFLTRNSDEKIELCRFSKDGTK 211 (392)
Q Consensus 137 ~i~d~~~~~~~~--~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~ 211 (392)
++||+++++... ....+...|.+++|+|++++|++++.|+.|++||++.++. ...+...+...+.+++|+|++..
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 999998876433 3456777999999999999999999999999999988763 34444555668999999999986
Q ss_pred ceEEEEEEeCCccEEEEEeCC------------------CceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEec
Q 016257 212 PFLFCTVQRGDKALLAVYDIS------------------TWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDV 273 (392)
Q Consensus 212 ~~~~~~~~~~~d~~i~v~d~~------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 273 (392)
+++++.|+.|++||++ .++.+..+..|...+.+++|+|++++|++++.|+.|++||+
T Consensus 157 -----l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 157 -----LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp -----EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred -----EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 7889999999999953 56777788888999999999999999999999999999999
Q ss_pred CCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 274 KKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 274 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
++++.+..+ ..| ...|.+++|+|++++|+++ .|+.|++|++..
T Consensus 232 ~~~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 232 DKKMAVATL-ASE-TLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp GGTTEEEEE-ECS-SCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCceeEEE-ccC-CCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999888776 467 7899999999999988877 899999999987
No 41
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.5e-39 Score=286.02 Aligned_cols=291 Identities=12% Similarity=0.150 Sum_probs=239.5
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|+|++|+|++.+ ++++|+. |+.|++|++...... .......+.+|...|.+++|+|++++|++++.
T Consensus 38 ~~~V~~v~~sp~~~~--~l~S~s~------D~~i~vWd~~~~~~~---~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~ 106 (340)
T 4aow_A 38 NGWVTQIATTPQFPD--MILSASR------DKTIIMWKLTRDETN---YGIPQRALRGHSHFVSDVVISSDGQFALSGSW 106 (340)
T ss_dssp SSCEEEEEECTTCTT--EEEEEET------TSCEEEEEECCSSSC---SEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCEEEEEEeCCCCC--EEEEEcC------CCeEEEEECCCCCcc---cceeeEEEeCCCCCEEEEEECCCCCEEEEEcc
Confidence 478999999998544 5666555 778999999754321 23455678999999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceee-cccCCCCcEEEEEe
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL-DEPKAHKSVLDMDF 162 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~i~~i~~ 162 (392)
|+.|++|+............ +...+....+++++++|++++.|+.+++||........ ....+...+..++|
T Consensus 107 d~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVG-------HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp TSEEEEEETTTTEEEEEEEC-------CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred cccceEEeecccceeeeecC-------CCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 99999999877664433322 45678899999999999999999999999997665443 34556678999999
Q ss_pred cCCC--CeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeee
Q 016257 163 SLDS--EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK 240 (392)
Q Consensus 163 ~~~~--~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~ 240 (392)
++++ .++++++.|+.|++||+++++....+..+. ..|.+++|+|+++. +++++.|+.|++||+++.+.+..+
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~-~~v~~~~~s~~~~~-----l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSL-----CASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCC-CcEEEEEECCCCCE-----EEEEeCCCeEEEEEeccCceeeee
Confidence 8865 568899999999999999999988887654 48999999999997 789999999999999999888776
Q ss_pred cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeee--------ccccCcceEEEEEeeCCCeEEEEeCCCeE
Q 016257 241 RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK--------RLHLGTSIALVEFCPTQRVVLTASKEWGA 312 (392)
Q Consensus 241 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 312 (392)
.. ...+.++.|+|++.+++ ++.|+.|++||++++.....+. ..| ...|++++|+|+|++|++|+.||.|
T Consensus 254 ~~-~~~v~~~~~~~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~s~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 254 DG-GDIINALCFSPNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAE-PPQCTSLAWSADGQTLFAGYTDNLV 330 (340)
T ss_dssp EC-SSCEEEEEECSSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CC-CCCEEEEEECTTSSEEEEEETTSCE
T ss_pred cC-CceEEeeecCCCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCC-CCCEEEEEECCCCCEEEEEeCCCEE
Confidence 65 46899999999886654 5569999999999877655432 356 7899999999999999999999999
Q ss_pred EEEEeecCc
Q 016257 313 MITKLTVPA 321 (392)
Q Consensus 313 ~iw~~~~~~ 321 (392)
+||++..+.
T Consensus 331 ~iW~~~tGt 339 (340)
T 4aow_A 331 RVWQVTIGT 339 (340)
T ss_dssp EEEEEEC--
T ss_pred EEEeCCCcC
Confidence 999998754
No 42
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.9e-40 Score=296.93 Aligned_cols=293 Identities=14% Similarity=0.077 Sum_probs=240.7
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCC----C---C
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS----G---D 76 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~----~---~ 76 (392)
.++|++++|+| . ++++|+. ++.|++|+++...... .......+.+|...|.+++|+|+ + +
T Consensus 16 ~~~i~~~~~~~-~----~l~s~~~------dg~i~iw~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 16 DADIFSVSACN-S----FTVSCSG------DGYLKVWDNKLLDNEN--PKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp SSCEEEEEECS-S----EEEEEET------TSEEEEEESBCCTTCC--GGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred hcCeEEEEecC-C----eEEEEcC------CCEEEEEECCCccccc--CCCcceEEecCCCcEEEEEEecccccCCcccc
Confidence 56899999998 2 4554444 6789999987543211 22345667899999999999999 9 9
Q ss_pred eEEEEeCCCeEEEEEEeCCcc-----ceeeccccCCCCCC--CCCeEEEEec----CCCCE-EEEEeCCCcEEEEeCCC-
Q 016257 77 DFVCSTTNGGCKLFEVYGGAT-----DINLLAKKMPPLQD--AGPQKCLSFS----VDGSR-FAAGGVDGHLRIMHWPS- 143 (392)
Q Consensus 77 ~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~~~~~~~~--~~~v~~~~~s----~~~~~-l~~~~~dg~i~i~d~~~- 143 (392)
+|++++.|+.|++|++.+.+. ...+.... .+ ...|.+++|+ |++++ |++++.||.|++||+++
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLD----SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSC----TTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccc----cccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 999999999999999998775 22222100 01 4799999999 99999 99999999999999988
Q ss_pred -----Cceee-----cc-------cCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEec---CC--CcceE
Q 016257 144 -----LRIIL-----DE-------PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR---NS--DEKIE 201 (392)
Q Consensus 144 -----~~~~~-----~~-------~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---~~--~~~v~ 201 (392)
++.+. .+ ..+...|.+++|+|++ ++++++.|+.|++||+++++.+..+.. +. ...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccc
Confidence 55544 44 3356689999999999 999999999999999999999888876 40 45799
Q ss_pred EEEecCCCCcceEEEEEEeCCc---cEEEEEeCCCceeeeeecc-------------cCCCcEEEEECCCCCEEEEEeCC
Q 016257 202 LCRFSKDGTKPFLFCTVQRGDK---ALLAVYDISTWNKIGHKRL-------------LRKPASVLSISLDGKYLAMGSKD 265 (392)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~d---~~i~v~d~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~~d 265 (392)
+++|+|++.. +++++.| +.|++||+++++.+..+.. |...|.+++|+|++++|++++.|
T Consensus 238 ~i~~~~~~~~-----l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 238 SVKFSPQGSL-----LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp EEEECSSTTE-----EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred eEEECCCCCE-----EEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 9999999987 7888888 9999999999999888888 89999999999999999999999
Q ss_pred CcEEEEecCCceeeeeee------cc--------------ccCcceEEEEEeeCC----------CeEEEEeCCCeEEEE
Q 016257 266 GDICVVDVKKMEINHWSK------RL--------------HLGTSIALVEFCPTQ----------RVVLTASKEWGAMIT 315 (392)
Q Consensus 266 g~i~iwd~~~~~~~~~~~------~~--------------~~~~~i~~~~~s~~~----------~~l~~~~~dg~i~iw 315 (392)
|.|++||+++++.+..+. .. | ...|++++|+|++ ++|++++.||.|++|
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA-EPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCS-SCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred CeEEEEEcCCCceeEEEecccCcccchhhhhcccccccccc-CCceeEEEeccccccccccccccceEEEecCCCcEEEE
Confidence 999999999998887775 21 3 6789999999998 799999999999999
Q ss_pred EeecC
Q 016257 316 KLTVP 320 (392)
Q Consensus 316 ~~~~~ 320 (392)
++..+
T Consensus 392 ~~~~g 396 (397)
T 1sq9_A 392 REAGG 396 (397)
T ss_dssp EEEC-
T ss_pred EcCCC
Confidence 99754
No 43
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-40 Score=285.17 Aligned_cols=251 Identities=13% Similarity=0.104 Sum_probs=207.0
Q ss_pred EEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCc--cceeeccccCCCCCCCCCeEEEEecC--CCCEEEEEeC
Q 016257 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGA--TDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGV 132 (392)
Q Consensus 57 ~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~ 132 (392)
..+.+|.+.|++++|+|+|++|++|+.|++|+|||+.... ....+ ..|.++|.+++|++ ++++|++|+.
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l-------~gH~~~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL-------TGHEGPVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE-------CCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE-------ccccCCeEEEEecCCCcCCEEEEEcC
Confidence 3577999999999999999999999999999999997542 22222 14788999999986 4899999999
Q ss_pred CCcEEEEeCCCCc--eeecccCCCCcEEEEEecCC--CCeEEEEcCCCcEEEEECCCCee--eEEEecCCCcceEEEEec
Q 016257 133 DGHLRIMHWPSLR--IILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFS 206 (392)
Q Consensus 133 dg~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~ 206 (392)
|++|++||+++++ .+..+..|...|.+++|+|+ +.+|++++.|++|++||++++.. ...+.. +...|.+++|+
T Consensus 76 D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~-h~~~v~~~~~~ 154 (297)
T 2pm7_B 76 DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWA 154 (297)
T ss_dssp TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC-CSSCEEEEEEC
T ss_pred CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec-ccCccceEeec
Confidence 9999999998774 34445667779999999997 88999999999999999987632 234444 45579999999
Q ss_pred CCC-------------CcceEEEEEEeCCccEEEEEeCCCce----eeeeecccCCCcEEEEECCCC---CEEEEEeCCC
Q 016257 207 KDG-------------TKPFLFCTVQRGDKALLAVYDISTWN----KIGHKRLLRKPASVLSISLDG---KYLAMGSKDG 266 (392)
Q Consensus 207 ~~~-------------~~~~~~~~~~~~~d~~i~v~d~~~~~----~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg 266 (392)
|++ .. +++++.|+.|++||+++++ ....+..|...|.+++|+|++ .+|++++.|+
T Consensus 155 p~~~~~~~~~~~~~~~~~-----l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRK-----FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp CCC------------CCE-----EEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred CCcccccccCCCCCCcce-----EEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 973 33 7999999999999998765 556778899999999999984 8999999999
Q ss_pred cEEEEecCCce--ee-eee-eccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCc
Q 016257 267 DICVVDVKKME--IN-HWS-KRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPA 321 (392)
Q Consensus 267 ~i~iwd~~~~~--~~-~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 321 (392)
+|++||+++.. .. ..+ ...| ...|.+++|+|+|++|++++.||.|++|+.....
T Consensus 230 ~v~iWd~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g 287 (297)
T 2pm7_B 230 TCIIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (297)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCC-SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cEEEEEeCCCCCccceeeeecccC-CCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCC
Confidence 99999998743 11 111 1356 7889999999999999999999999999987543
No 44
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-39 Score=290.00 Aligned_cols=283 Identities=14% Similarity=0.090 Sum_probs=242.6
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|++++|+|++. ++++|+. ++.|++|++. .......+.+|.+.|.+++|+|++++|++++.
T Consensus 32 ~~~v~~~~~s~~~~---~l~~~~~------dg~i~vwd~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 32 ERPLTQVKYNKEGD---LLFSCSK------DSSASVWYSL--------NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp SSCEEEEEECTTSC---EEEEEES------SSCEEEEETT--------TCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred eceEEEEEEcCCCC---EEEEEeC------CCEEEEEeCC--------CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC
Confidence 46899999999884 4555544 6679999876 34556678899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC-----CcEEEEeCCCCce-----------e
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-----GHLRIMHWPSLRI-----------I 147 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~-----------~ 147 (392)
|+.|++||+.+++....+. +...+.+++|+|++++|++++.+ +.|++||+..... .
T Consensus 95 dg~i~iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWK--------SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp TTEEEEEETTTCCEEEEEE--------CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred CCeEEEEECCCCcEEEEee--------cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 9999999998877544432 45789999999999999999998 9999999876532 2
Q ss_pred ecccCCCC--cEEEEEecCCCCeEEEEcCCCcEEEEECCC-CeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCcc
Q 016257 148 LDEPKAHK--SVLDMDFSLDSEFLATTSTDGSARIWKTED-GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (392)
Q Consensus 148 ~~~~~~~~--~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~ 224 (392)
.....+.. .+.+++|+|++++|++++.||.|++||+++ .+....+..+ ...+.+++|+|++.. +++++.|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-----l~~~~~d~ 240 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH-EKSISDMQFSPDLTY-----FITSSRDT 240 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC-SSCEEEEEECTTSSE-----EEEEETTS
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC-CCceeEEEECCCCCE-----EEEecCCc
Confidence 22333444 899999999999999999999999999998 6777777655 457999999999987 78899999
Q ss_pred EEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCC--------------cEEEEecCCceeeeeeeccccCcc
Q 016257 225 LLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDG--------------DICVVDVKKMEINHWSKRLHLGTS 290 (392)
Q Consensus 225 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~ 290 (392)
.|++||+++++.+..+. +...+..++|+|+++++++++.++ .+++||..+++....+ ..| ...
T Consensus 241 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~-~~~ 317 (369)
T 3zwl_B 241 NSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV-QGH-FGP 317 (369)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE-ECC-SSC
T ss_pred eEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe-ecc-cCc
Confidence 99999999988877766 678899999999999999999888 8999999999988776 578 899
Q ss_pred eEEEEEeeCCCeEEEEeCCCeEEEEEeecC
Q 016257 291 IALVEFCPTQRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 291 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 320 (392)
|++++|+|++++|++++.||.|++|++...
T Consensus 318 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 318 LNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 999999999999999999999999999854
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.7e-40 Score=314.78 Aligned_cols=289 Identities=11% Similarity=0.129 Sum_probs=237.5
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|+|++|+|++.+ ++++|+. |+.|++|.+...... .......+.+|...|.+++|+|++++|++|+.
T Consensus 382 ~~~V~~v~~~~~~~~--~l~s~s~------D~~i~~W~~~~~~~~---~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~ 450 (694)
T 3dm0_A 382 TDMVTAIATPIDNAD--IIVSASR------DKSIILWKLTKDDKA---YGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW 450 (694)
T ss_dssp SSCEEEEECCTTCCS--EEEEEET------TSEEEEEECCCSTTC---SCEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CceeEEEEecCCCCC--EEEEEeC------CCcEEEEEccCCCcc---cccccceecCCCCcEEEEEECCCCCEEEEEeC
Confidence 468999999997654 5665555 778999998754321 23445678999999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecc---cCCCCcEEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE---PKAHKSVLDM 160 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~i 160 (392)
|++|+|||+.++.....+. .|...|.+++|+|++++|++++.|++|++||.......... ..|...|.++
T Consensus 451 Dg~v~vwd~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFV-------GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp TSEEEEEETTTTEEEEEEE-------CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEE
T ss_pred CCcEEEEECCCCcceeEEe-------CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEE
Confidence 9999999998876554443 37889999999999999999999999999998654332221 3456689999
Q ss_pred EecCCC--CeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeee
Q 016257 161 DFSLDS--EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIG 238 (392)
Q Consensus 161 ~~~~~~--~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~ 238 (392)
+|+|++ ..+++++.|++|++||+++++....+..|. ..|.+++|+|++.. +++++.|+.|++||+++++.+.
T Consensus 524 ~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~-~~v~~v~~spdg~~-----l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT-GYVSTVAVSPDGSL-----CASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSE-----EEEEETTSBCEEEETTTTEEEE
T ss_pred EEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCC-CCEEEEEEeCCCCE-----EEEEeCCCeEEEEECCCCceEE
Confidence 999986 579999999999999999998888887664 47999999999997 8999999999999999998877
Q ss_pred eecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecccc-----------------CcceEEEEEeeCCC
Q 016257 239 HKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHL-----------------GTSIALVEFCPTQR 301 (392)
Q Consensus 239 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----------------~~~i~~~~~s~~~~ 301 (392)
.+.. ...+.+++|+|++.++++++ ++.|++||+++++.+..+..... ...+++++|+|+|+
T Consensus 598 ~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~ 675 (694)
T 3dm0_A 598 SLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS 675 (694)
T ss_dssp CCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS
T ss_pred EecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC
Confidence 6654 56799999999999888876 55699999999887665421100 12378999999999
Q ss_pred eEEEEeCCCeEEEEEee
Q 016257 302 VVLTASKEWGAMITKLT 318 (392)
Q Consensus 302 ~l~~~~~dg~i~iw~~~ 318 (392)
+|++|+.||.|++|++.
T Consensus 676 ~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 676 TLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEEETTSEEEEEEC-
T ss_pred EEEEEcCCCeEEEEecc
Confidence 99999999999999985
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.8e-41 Score=304.40 Aligned_cols=320 Identities=13% Similarity=0.101 Sum_probs=246.1
Q ss_pred eeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCe
Q 016257 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (392)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~ 86 (392)
+++++|+|++.. +++|+. ++.+++|++.... ....+..| ..+....|+|++++|++++.|+.
T Consensus 59 ~~~~~~s~~g~~---l~~~~~------d~~v~i~d~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~ 120 (420)
T 3vl1_A 59 GKGNTFEKVGSH---LYKARL------DGHDFLFNTIIRD--------GSKMLKRA-DYTAVDTAKLQMRRFILGTTEGD 120 (420)
T ss_dssp CTTCEEEEEETT---EEEEEE------TTEEEEEECCSEE--------TTTTSCSC-CEEEEEEECSSSCEEEEEETTSC
T ss_pred ccceeeeecCCe---EEEEEc------CCcEEEEEecccc--------eeeEEecC-CceEEEEEecCCCEEEEEECCCC
Confidence 457899999865 444333 6678899876321 11223344 44556678999999999999999
Q ss_pred EEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCC
Q 016257 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDS 166 (392)
Q Consensus 87 i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~ 166 (392)
|++||+.+++....+. .|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|++
T Consensus 121 i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 121 IKVLDSNFNLQREIDQ-------AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRG 193 (420)
T ss_dssp EEEECTTSCEEEEETT-------SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTT
T ss_pred EEEEeCCCcceeeecc-------cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCC
Confidence 9999988765432221 378899999999999999999999999999999998888888888899999999999
Q ss_pred CeEEEEcCCCcEEEEECCCCeeeEEEecC--CCcce---------------------EEEEecCCCCcceEEEEEEeCCc
Q 016257 167 EFLATTSTDGSARIWKTEDGVAWTFLTRN--SDEKI---------------------ELCRFSKDGTKPFLFCTVQRGDK 223 (392)
Q Consensus 167 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~--~~~~v---------------------~~~~~~~~~~~~~~~~~~~~~~d 223 (392)
++|++++.|+.|++||+++++.+..+..+ +...+ .+++|+|++.. +++++.|
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-----l~~~~~d 268 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY-----VIAGHVS 268 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE-----EEEEETT
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE-----EEEEcCC
Confidence 99999999999999999999998888643 22234 44555777776 7889999
Q ss_pred cEEEEEeCCCceeeeeec-ccCCCcEEEEECCCCC-EEEEEeCCCcEEEEecCCcee-eeeeeccccCcceEEEEEeeCC
Q 016257 224 ALLAVYDISTWNKIGHKR-LLRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKMEI-NHWSKRLHLGTSIALVEFCPTQ 300 (392)
Q Consensus 224 ~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~~s~~~ 300 (392)
+.|++||+++++.+..+. .|...+.+++|+|++. +|++|+.||.|++||+++++. ...+...| ...|.++.| +++
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~~-~~~ 346 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE-GTPINNVYF-AAG 346 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST-TSCEEEEEE-ETT
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC-CCCceEEEe-CCC
Confidence 999999999988766654 4678999999999998 999999999999999998754 44443335 778888855 588
Q ss_pred CeEEEEeCCCeEEEEEeecCcccccee------ee------eeeeeeeeece---EEEEeeecceeeeecccc
Q 016257 301 RVVLTASKEWGAMITKLTVPADWKEWQ------IY------SLLLALFLASA---VVFYIFFENSDSFWNFPV 358 (392)
Q Consensus 301 ~~l~~~~~dg~i~iw~~~~~~~~~~~~------~~------~~~~~~~~~~~---~~~~~~~d~~i~~W~~~~ 358 (392)
++|++++.||.|++|++..+....... .. ........... .+++++.++.+.+|++..
T Consensus 347 ~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 347 ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred CEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 899999999999999998643221100 00 00011111222 577888899999999763
No 47
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.9e-40 Score=297.00 Aligned_cols=289 Identities=11% Similarity=0.093 Sum_probs=237.4
Q ss_pred eEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCc------cceeeccccCCCCCCCCCeEEEEecCC----C
Q 016257 55 VTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGA------TDINLLAKKMPPLQDAGPQKCLSFSVD----G 124 (392)
Q Consensus 55 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~s~~----~ 124 (392)
....+.+|.+.|++++|+| ++|++++.||.|++|++.+.+ ....+. .|...|.+++|+|+ +
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~g 78 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-------VHKSGLHHVDVLQAIERDA 78 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-------CCTTCEEEEEEEEEEETTT
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEe-------cCCCcEEEEEEecccccCC
Confidence 4456789999999999998 799999999999999998876 222222 37789999999999 9
Q ss_pred ---CEEEEEeCCCcEEEEeCCCCce-----eecccCC-----CCcEEEEEec----CCCCe-EEEEcCCCcEEEEECCC-
Q 016257 125 ---SRFAAGGVDGHLRIMHWPSLRI-----ILDEPKA-----HKSVLDMDFS----LDSEF-LATTSTDGSARIWKTED- 185 (392)
Q Consensus 125 ---~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~-----~~~i~~i~~~----~~~~~-l~~~~~d~~i~vwd~~~- 185 (392)
++|++++.|+.|++|++.+++. ...+..+ ...|.+++|+ |++++ |++++.|+.|++||+++
T Consensus 79 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 79 FELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred ccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 9999999999999999988876 6666666 4789999999 99999 99999999999999998
Q ss_pred -----CeeeE-----EEe------cCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc---c---
Q 016257 186 -----GVAWT-----FLT------RNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL---L--- 243 (392)
Q Consensus 186 -----~~~~~-----~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~---~--- 243 (392)
++.+. .+. ..+...+.+++|+|++ . +++++.|+.|++||+++++.+..+.. |
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~ 232 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L-----IATGFNNGTVQISELSTLRPLYNFESQHSMINN 232 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E-----EEEECTTSEEEEEETTTTEEEEEEECCC---CC
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e-----EEEEeCCCcEEEEECCCCceeEEEecccccccc
Confidence 66655 664 2345579999999999 6 79999999999999999999888888 8
Q ss_pred CCCcEEEEECCCCCEEEEEeCC---CcEEEEecCCceeeeeeecc-------------ccCcceEEEEEeeCCCeEEEEe
Q 016257 244 RKPASVLSISLDGKYLAMGSKD---GDICVVDVKKMEINHWSKRL-------------HLGTSIALVEFCPTQRVVLTAS 307 (392)
Q Consensus 244 ~~~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~ 307 (392)
...+.+++|+|++++|++++.| +.|++||+++++.+..+. . | ...|.+++|+|++++|++++
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS-VPTHSSQASLGEFAH-SSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC-BC--------CCBSB-SSCEEEEEECSSSSEEEEEE
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec-cCccccccccccccc-CCcEEEEEECCCCCEEEEEe
Confidence 8999999999999999999999 999999999998877763 4 7 88999999999999999999
Q ss_pred CCCeEEEEEeecCcccccee------e----------------eeeeeee-eeec-----------eEEEEeeecceeee
Q 016257 308 KEWGAMITKLTVPADWKEWQ------I----------------YSLLLAL-FLAS-----------AVVFYIFFENSDSF 353 (392)
Q Consensus 308 ~dg~i~iw~~~~~~~~~~~~------~----------------~~~~~~~-~~~~-----------~~~~~~~~d~~i~~ 353 (392)
.||.|++|++........+. . ...+... +... ..+++++.|+.|++
T Consensus 311 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i 390 (397)
T 1sq9_A 311 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 390 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEE
Confidence 99999999997654433332 0 1111122 2222 47888889999999
Q ss_pred ecccccc
Q 016257 354 WNFPVAR 360 (392)
Q Consensus 354 W~~~~~~ 360 (392)
|++.+|+
T Consensus 391 w~~~~g~ 397 (397)
T 1sq9_A 391 FREAGGK 397 (397)
T ss_dssp EEEEC--
T ss_pred EEcCCCC
Confidence 9998763
No 48
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.5e-41 Score=307.50 Aligned_cols=292 Identities=16% Similarity=0.179 Sum_probs=226.8
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC-CCCeEEEEe
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVCST 82 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~ 82 (392)
...|+|++|+|.... ++++|+. ++.|++|+++.. .......+.+|.+.|++++|+| ++++|++++
T Consensus 119 ~~~V~~l~~~P~~~~--~lasGs~------dg~i~lWd~~~~------~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 119 DRRATSLAWHPTHPS--TVAVGSK------GGDIMLWNFGIK------DKPTFIKGIGAGGSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp SSCEEEEEECSSCTT--CEEEEET------TSCEEEECSSCC------SCCEEECCCSSSCCCCEEEECSSCTTEEEEEC
T ss_pred CCCEEEEEEeCCCCC--EEEEEeC------CCEEEEEECCCC------CceeEEEccCCCCCEEEEEEeCCCCCEEEEEe
Confidence 346999999996554 5676655 677999987643 2233455778999999999998 688999999
Q ss_pred CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEe
Q 016257 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~ 162 (392)
.|++|++||+++..... +... ..+...+.+++|+|++++|++|+.||.|++||++. +.+..+..|...|.+++|
T Consensus 185 ~D~~v~iwd~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 185 MEGTTRLQDFKGNILRV-FASS----DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVAL 258 (435)
T ss_dssp SSSCEEEEETTSCEEEE-EECC----SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEE
T ss_pred CCCEEEEeeccCCceeE-Eecc----CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeee
Confidence 99999999987654321 1111 12345678999999999999999999999999864 555677788889999999
Q ss_pred cCCCC-eEEEEcCCCcEEEEECCCCeeeEEEe--cCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeee
Q 016257 163 SLDSE-FLATTSTDGSARIWKTEDGVAWTFLT--RNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239 (392)
Q Consensus 163 ~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~ 239 (392)
+|+++ +|++++.|+.|++||+++.+....+. ..|...|.+++|+|++.. +++++.|+.|++||+++++....
T Consensus 259 ~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~-----l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR-----LLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp CTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE-----EEEEESSSCEEEEESSSSSSEEE
T ss_pred cCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCe-----eEEEcCCCEEEEEECCCCccceE
Confidence 99876 67899999999999998876544432 234568999999999997 89999999999999998877665
Q ss_pred ecccCC------CcEEEEECCCCCEEEEEe------------CCCcEEEEecCCceeeeeeeccccCcceEEE-EEeeCC
Q 016257 240 KRLLRK------PASVLSISLDGKYLAMGS------------KDGDICVVDVKKMEINHWSKRLHLGTSIALV-EFCPTQ 300 (392)
Q Consensus 240 ~~~~~~------~v~~~~~s~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~-~~s~~~ 300 (392)
+..|.. .+....|+|++.+++++. .++.|++||..+++.+..+...| ...|.++ +|+|+|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~-~~~v~s~~~fspdg 412 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE-SSGISSLNEFNPMG 412 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS-CCCCCCEEEECTTS
T ss_pred EecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC-CCcEEEEEEECCCC
Confidence 554432 233456777777776654 23579999999999888776677 7788887 699999
Q ss_pred CeEEEEeCCCeEEEEEeecCcc
Q 016257 301 RVVLTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 301 ~~l~~~~~dg~i~iw~~~~~~~ 322 (392)
++|++|+ |+.|+||+++.++.
T Consensus 413 ~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 413 DTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SCEEEEC-SSEEEECCCC----
T ss_pred CEEEEEc-CCcEEEEECCcCee
Confidence 9999876 78999999986543
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-41 Score=301.09 Aligned_cols=244 Identities=13% Similarity=0.123 Sum_probs=192.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|+|++|+|++ .++++|+. ++.|++|+++... ......+.+|.+.|.+++|+|++++|++++.
T Consensus 11 ~~~v~~~~~s~~g---~~l~~~~~------d~~i~iw~~~~~~------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 75 (377)
T 3dwl_C 11 PKPSYEHAFNSQR---TEFVTTTA------TNQVELYEQDGNG------WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ 75 (377)
T ss_dssp SSCCSCCEECSSS---SEEECCCS------SSCBCEEEEETTE------EEECCCBCCCSSCEEEEEECTTTCCEEEEET
T ss_pred CCcEEEEEECCCC---CEEEEecC------CCEEEEEEccCCc------eEEEEEEecCCceEEEEEEeCCCCEEEEEeC
Confidence 5789999999988 45776554 6779999997321 1344567899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCce---eecccC-CCCcEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI---ILDEPK-AHKSVLD 159 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~-~~~~i~~ 159 (392)
|+.|++||+.+++..... .....|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. |...|.+
T Consensus 76 d~~v~vwd~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 151 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTWKQT----LVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILS 151 (377)
T ss_dssp TSSEEEC------CCCCE----EECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEE
T ss_pred CCeEEEEEcCCCCceeee----eEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEE
Confidence 999999999887611111 11124788999999999999999999999999999988763 455555 7779999
Q ss_pred EEecCCCCeEEEEcCCCcEEEEECCC------------------CeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeC
Q 016257 160 MDFSLDSEFLATTSTDGSARIWKTED------------------GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221 (392)
Q Consensus 160 i~~~~~~~~l~~~~~d~~i~vwd~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (392)
++|+|++++|++++.|+.|++||++. ++.+..+ .+...|.+++|+|+++. +++++
T Consensus 152 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~-----l~~~~ 224 (377)
T 3dwl_C 152 LDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNA-----LAYAG 224 (377)
T ss_dssp EEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSC-----EEEEE
T ss_pred EEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCE-----EEEEe
Confidence 99999999999999999999999852 3444445 45668999999999997 79999
Q ss_pred CccEEEEEeCCCcee----eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecC
Q 016257 222 DKALLAVYDISTWNK----IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (392)
Q Consensus 222 ~d~~i~v~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 274 (392)
.|+.|++||+++++. +..+..|...|.+++|+|++++|++++.++.+ +|+..
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 225 HDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 999999999999887 77888899999999999999999998866644 77665
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-41 Score=310.43 Aligned_cols=342 Identities=11% Similarity=0.081 Sum_probs=239.6
Q ss_pred CCceeeeecCCCCCc------ceeEEEeCCCCC-------------CCCCcCceeEEEEcCCCCccccCCceEEEeeCCC
Q 016257 3 GGGTVTCGSWIKRPE------NVNLVVLGKSSR-------------ASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESE 63 (392)
Q Consensus 3 ~~~~v~~~~w~~~~~------~~~~~~~g~~~~-------------~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~ 63 (392)
.+++|++|+|+|++. ...++|+|.... .++.++.|+||+++.... .......+.+|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~----~~~~~~~l~~~~ 207 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTL----HCVKVQTIVHSF 207 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTC----CEEEEEEEEECC
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCC----CceEEEEEEecC
Confidence 368999999999861 113555544221 134688999999975321 111234567888
Q ss_pred CCeeEEEEcCC------CCeEEEEeCCCeEEEEEEeCCcccee----eccccCCCCCCCCCeEEEEecCCCCEEEEEeCC
Q 016257 64 GDPMTIAVNPS------GDDFVCSTTNGGCKLFEVYGGATDIN----LLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (392)
Q Consensus 64 ~~v~~~~~sp~------~~~l~~~~~d~~i~iw~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (392)
+.|.+++|+|+ +.+||+++.||+|++||+..+..... ..........|...|.+++|++++ .|++|+.|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~D 286 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKN 286 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETT
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCC
Confidence 99999999997 57999999999999999976643210 000000112367899999999865 89999999
Q ss_pred CcEEEEeCCCCce-eecccCCCCcEEEE--EecCCC-CeEEEEcCCCcEEEEECCCCeeeEEEecCCC-cceEEEEecCC
Q 016257 134 GHLRIMHWPSLRI-ILDEPKAHKSVLDM--DFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLTRNSD-EKIELCRFSKD 208 (392)
Q Consensus 134 g~i~i~d~~~~~~-~~~~~~~~~~i~~i--~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~ 208 (392)
|+|++||+++++. ...+..|...|.++ .|+|++ .+|++++.|++|++||++++++...+..+.. ..+.+++|+|+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 9999999987643 33466788899999 578887 8999999999999999999887777665543 24789999999
Q ss_pred CCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec---c
Q 016257 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR---L 285 (392)
Q Consensus 209 ~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~ 285 (392)
+.. +++++.|+.|++||++++..+..+..|...|++++|+|+|++|++|+.||+|++||+... ....... .
T Consensus 367 ~~~-----l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~ 440 (524)
T 2j04_B 367 IYS-----YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSAT 440 (524)
T ss_dssp TTE-----EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------
T ss_pred cCe-----EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccc
Confidence 886 788899999999999998887788889999999999999999999999999999998654 2211100 1
Q ss_pred ccCcceEEEEEeeCCCeEEEEeCCCeE--------EEEEeecCccccceeeeeeeeeeeeeceEEEEeeecceeeeeccc
Q 016257 286 HLGTSIALVEFCPTQRVVLTASKEWGA--------MITKLTVPADWKEWQIYSLLLALFLASAVVFYIFFENSDSFWNFP 357 (392)
Q Consensus 286 ~~~~~i~~~~~s~~~~~l~~~~~dg~i--------~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~ 357 (392)
+....+.+++|+|+++.+.. ..+..+ .+-.+.. ....++.+.+.+.+. ....+++++.+|.|+||++.
T Consensus 441 ~~~~~v~~v~~sp~g~~~~~-~~~~~~~~~~~~g~~~~~l~g-h~~~V~~Vafsp~~~--~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 441 QKSLRLWKWDYSIKDDKYRI-DSSYEVYPLTVNDVSKAKIDA-HGINITCTKWNETSA--GGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp CCCCEEEECBCCSSSCEEEE-CCCCCCCC--------------CCCSCCCEEECCSTT--TTTEEEEECTTSEEEEEECS
T ss_pred eeeeEEEEeccCCCCCeEEc-cCCceecccccCCcceeeecC-CCceEEEEECCCCCC--ccHHHHhhccCceEEEEEcc
Confidence 11225678888888875432 221111 1222332 233566776666542 13355666678888888886
Q ss_pred cc
Q 016257 358 VA 359 (392)
Q Consensus 358 ~~ 359 (392)
..
T Consensus 517 ~~ 518 (524)
T 2j04_B 517 LE 518 (524)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 51
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=291.10 Aligned_cols=289 Identities=9% Similarity=0.103 Sum_probs=230.8
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCC---CCeEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS---GDDFVC 80 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~---~~~l~~ 80 (392)
..+|++++|+|++.+ ++++|+.. ..++.+++|+++... .......+|...|.+++|+|+ +++|++
T Consensus 18 ~~~v~~~~~~p~~~~--l~~~~s~~---~~d~~v~iw~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAK--FVTMGNFA---RGTGVIQLYEIQHGD-------LKLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp SSCEEEEEECTTSSE--EEEEEC-----CCCEEEEEEEECSSS-------EEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred CCceEEEEEcCCCce--EEEecCcc---CCCcEEEEEeCCCCc-------ccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 468999999998865 55555431 126789999987321 122223478999999999998 699999
Q ss_pred EeCCCeEEEEEEeCCc-cceeeccccCCCCCCCCCeEEEE------ecCCCCEEEEEeCCCcEEEEeCCCCc-eeecccC
Q 016257 81 STTNGGCKLFEVYGGA-TDINLLAKKMPPLQDAGPQKCLS------FSVDGSRFAAGGVDGHLRIMHWPSLR-IILDEPK 152 (392)
Q Consensus 81 ~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~------~s~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~ 152 (392)
++.|+.|++||+.+.+ ....+. .|...|.++. |+|++++|++++.|+.|++||+++++ ....+..
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 158 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVK-------GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP 158 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEEC-------CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred ecCCCeEEEEeCCCCCccEEEEE-------ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence 9999999999998876 333322 3778999995 57899999999999999999999876 4444443
Q ss_pred CCC----cEEEEE----ecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecC---CCCcceEEEEEEeC
Q 016257 153 AHK----SVLDMD----FSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK---DGTKPFLFCTVQRG 221 (392)
Q Consensus 153 ~~~----~i~~i~----~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~ 221 (392)
+.+ .+.+++ |+|++++|++++.|+.|++||+++++...... +...+.+++|+| ++.. +++++
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~-----l~~~~ 231 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN--IKNGVCSLEFDRKDISMNK-----LVATS 231 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEESCSSSSCCE-----EEEEE
T ss_pred cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC--CCCceEEEEcCCCCCCCCE-----EEEEC
Confidence 332 788888 78899999999999999999999988755433 345799999999 7876 78899
Q ss_pred CccEEEEEeCCCceeeeeec-----ccCCCcEEEEECCCCC-EEEEEeCCCcEEEEecCCce------------------
Q 016257 222 DKALLAVYDISTWNKIGHKR-----LLRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKME------------------ 277 (392)
Q Consensus 222 ~d~~i~v~d~~~~~~~~~~~-----~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~------------------ 277 (392)
.|+.|++||+++++....+. .|...|++++|+|+++ +|++++.||.|++||++++.
T Consensus 232 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~ 311 (357)
T 3i2n_A 232 LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSV 311 (357)
T ss_dssp STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEE
T ss_pred CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccc
Confidence 99999999999877655544 7899999999999998 89999999999999998643
Q ss_pred -eeeeeeccccCcceEEEEEeeCCCeEE-EEeCCCeEEEEEeecC
Q 016257 278 -INHWSKRLHLGTSIALVEFCPTQRVVL-TASKEWGAMITKLTVP 320 (392)
Q Consensus 278 -~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~ 320 (392)
.+..+ ..| ...|++++|+|++++|+ +++.||.|++|++...
T Consensus 312 ~~~~~~-~~~-~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 312 SLLQNV-TLS-TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEEE-ECC-SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred ceeecc-ccC-CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 23333 567 88999999999999998 8999999999999754
No 52
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.5e-40 Score=334.92 Aligned_cols=328 Identities=16% Similarity=0.173 Sum_probs=267.2
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|++++|+|++. ++++|+. ++.|++|++. .......+.+|.+.|.+++|+|++++|++++.
T Consensus 615 ~~~v~~~~~s~~~~---~l~s~~~------d~~i~vw~~~--------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 677 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQ---RIASCGA------DKTLQVFKAE--------TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA 677 (1249)
T ss_dssp SSCEEEEEECTTSS---EEEEEET------TSCEEEEETT--------TCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cccEEEEEECCCCC---EEEEEeC------CCeEEEEECC--------CCCEEEEeccCCCCEEEEEEecCCCEEEEEeC
Confidence 46899999999984 4665544 6779999886 44556678899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC--CCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMD 161 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~ 161 (392)
|+.|++||+.+++....+. .|...|.+++|+| ++.++++|+.|+.|++||+++++....+..|...|.+++
T Consensus 678 d~~v~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~ 750 (1249)
T 3sfz_A 678 DKKVKIWDSATGKLVHTYD-------EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCR 750 (1249)
T ss_dssp TSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEE
T ss_pred CCeEEEEECCCCceEEEEc-------CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEE
Confidence 9999999999887655543 3678999999999 556899999999999999999999888888989999999
Q ss_pred ecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe------------------------------------------------
Q 016257 162 FSLDSEFLATTSTDGSARIWKTEDGVAWTFLT------------------------------------------------ 193 (392)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~------------------------------------------------ 193 (392)
|+|+++++++++.||.|++||+++++....+.
T Consensus 751 ~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 751 FSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp ECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred EecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 99999999999999999999998765544332
Q ss_pred ------cCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCc
Q 016257 194 ------RNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGD 267 (392)
Q Consensus 194 ------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 267 (392)
..+...+.+++|+|++.. +++++.++.|++||+.++..+..+..|...|++++|+|++++|++++.||.
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~~~~-----l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~ 905 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPYDHL-----AVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQT 905 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSSTTE-----EEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ceeEEcCCCCCceEEEEEcCCCCE-----EEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCe
Confidence 133456888999999987 789999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCc-----------------------------------------------------------------------
Q 016257 268 ICVVDVKKM----------------------------------------------------------------------- 276 (392)
Q Consensus 268 i~iwd~~~~----------------------------------------------------------------------- 276 (392)
|++||+.+.
T Consensus 906 v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i 985 (1249)
T 3sfz_A 906 IRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAI 985 (1249)
T ss_dssp EEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCC
T ss_pred EEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCE
Confidence 999986421
Q ss_pred --------eeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceeeee-eeeeeeeeceEEEEeee
Q 016257 277 --------EINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQIYS-LLLALFLASAVVFYIFF 347 (392)
Q Consensus 277 --------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 347 (392)
+.... ..+| ...|++++|+|+|++|++++.||.|++|++............. .....+.....+++++.
T Consensus 986 ~i~d~~~~~~~~~-~~~h-~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~ 1063 (1249)
T 3sfz_A 986 KIIELPNNRVFSS-GVGH-KKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSF 1063 (1249)
T ss_dssp EEEETTTTSCEEE-CCCC-SSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEES
T ss_pred EEEEcCCCceeee-cccC-CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEC
Confidence 11111 1356 7789999999999999999999999999998654322111110 11111223556788889
Q ss_pred cceeeeecccccccc
Q 016257 348 ENSDSFWNFPVARNQ 362 (392)
Q Consensus 348 d~~i~~W~~~~~~~~ 362 (392)
|+.+++||+.+++..
T Consensus 1064 dg~v~vwd~~~~~~~ 1078 (1249)
T 3sfz_A 1064 DGTVKVWNVITGRIE 1078 (1249)
T ss_dssp SSEEEEEETTTTCCC
T ss_pred CCcEEEEECCCCcee
Confidence 999999999887644
No 53
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.1e-40 Score=295.45 Aligned_cols=285 Identities=16% Similarity=0.211 Sum_probs=227.4
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC-CCCeEEEEe
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVCST 82 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~ 82 (392)
..+|++++|+|++.+ ++++|+. ++.|++|+++.. .......+.+|.+.|.+++|+| ++++|++++
T Consensus 73 ~~~v~~~~~~~~~~~--~l~s~~~------dg~i~iwd~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPT--TVAVGSK------GGDIILWDYDVQ------NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp SSCEEEEEECSSCTT--EEEEEEB------TSCEEEEETTST------TCEEEECCCSTTCBEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEECCCCCC--EEEEEcC------CCeEEEEeCCCc------ccceeeecCCcCCceeEEEeCCCCCCEEEEEe
Confidence 468999999998743 4554444 667999998733 2222333457999999999999 778999999
Q ss_pred CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEe
Q 016257 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~ 162 (392)
.|+.|++||+.+.. ...+.. ...+...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.+++|
T Consensus 139 ~d~~i~iwd~~~~~-~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 139 IRGATTLRDFSGSV-IQVFAK----TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEF 212 (383)
T ss_dssp TTTEEEEEETTSCE-EEEEEC----CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEEECCCCc-eEEEec----cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEE
Confidence 99999999998533 222221 1125578999999999999999999999999999 56777778888889999999
Q ss_pred cCCCC-eEEEEcCCCcEEEEECCC----CeeeEEEecCCCcceEEEEecC-CCCcceEEEEEEeCCccEEEEEeCCCcee
Q 016257 163 SLDSE-FLATTSTDGSARIWKTED----GVAWTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGDKALLAVYDISTWNK 236 (392)
Q Consensus 163 ~~~~~-~l~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~d~~i~v~d~~~~~~ 236 (392)
+|+++ +|++++.|+.|++||+++ +..+..+. +...+.+++|+| ++.. +++++.|+.|++||+++++.
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~-----l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP--HEKPVNAAYFNPTDSTK-----LLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE--CSSCEEEEEECTTTSCE-----EEEEESSSEEEEEETTBTTS
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec--CCCceEEEEEcCCCCCE-----EEEEcCCCcEEEEECCCCcc
Confidence 99998 899999999999999987 55666553 456899999999 9887 78899999999999998876
Q ss_pred eeeecccC-----------------CCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecc-ccCcceEEEEEee
Q 016257 237 IGHKRLLR-----------------KPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL-HLGTSIALVEFCP 298 (392)
Q Consensus 237 ~~~~~~~~-----------------~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~ 298 (392)
...+..+. ..+..++|+|++++ +++.|+.|++||+.+++.+..+... | ...+..++|+|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~-~~~~~~~~~s~ 362 (383)
T 3ei3_B 286 PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNA-AGIISLNKFSP 362 (383)
T ss_dssp CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTB-CSCCCEEEECT
T ss_pred ccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCC-CceEEEEEEec
Confidence 65554332 23444666666666 6778999999999999988777432 4 67788889999
Q ss_pred CCCeEEEEeCCCeEEEEEeec
Q 016257 299 TQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 299 ~~~~l~~~~~dg~i~iw~~~~ 319 (392)
++++|++++ ||.|++|+++.
T Consensus 363 ~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 363 TGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TSSEEEEEE-TTEEEEEECC-
T ss_pred CccEEEEec-CCcEEEEecCC
Confidence 999999997 99999999874
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.9e-41 Score=298.62 Aligned_cols=244 Identities=11% Similarity=0.047 Sum_probs=199.6
Q ss_pred eeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCC--ccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcE
Q 016257 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGG--ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHL 136 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 136 (392)
+..|.++|++++|+|++++|++++.|+.|++||+.++ +....+ ..|...|.+++|+|++++|++++.|+.|
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~h~~~v~~~~~s~~~~~l~s~s~d~~v 79 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF-------SDHDKIVTCVDWAPKSNRIVTCSQDRNA 79 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB-------CCCSSCEEEEEECTTTCCEEEEETTSSE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE-------ecCCceEEEEEEeCCCCEEEEEeCCCeE
Confidence 4446789999999999999999999999999999976 322222 1378899999999999999999999999
Q ss_pred EEEeCCCCc---eeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCee---eEEEecCCCcceEEEEecCCCC
Q 016257 137 RIMHWPSLR---IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA---WTFLTRNSDEKIELCRFSKDGT 210 (392)
Q Consensus 137 ~i~d~~~~~---~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 210 (392)
++||+++++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+...+...|.+++|+|++.
T Consensus 80 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp EEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS
T ss_pred EEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC
Confidence 999999876 5566777888999999999999999999999999999998773 6667664566899999999998
Q ss_pred cceEEEEEEeCCccEEEEEeCC------------------CceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEe
Q 016257 211 KPFLFCTVQRGDKALLAVYDIS------------------TWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVD 272 (392)
Q Consensus 211 ~~~~~~~~~~~~d~~i~v~d~~------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 272 (392)
. +++++.|+.|++||++ .++.+..+ .|...|.+++|+|++++|++++.||.|++||
T Consensus 160 ~-----l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd 233 (377)
T 3dwl_C 160 L-----LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAY 233 (377)
T ss_dssp E-----EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CE
T ss_pred E-----EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 6 7899999999999985 34555556 8889999999999999999999999999999
Q ss_pred cCCcee----eeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 273 VKKMEI----NHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 273 ~~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
+.+++. +..+ ..| ...|.+++|+|++++|++++.|+.+ +|+..
T Consensus 234 ~~~~~~~~~~~~~~-~~~-~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 234 PSAPEQPPRALITV-KLS-QLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp ECSTTSCEEECCCE-ECS-SSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCCCCcceeeEee-cCC-CCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 999876 4444 577 8899999999999999998877655 66654
No 55
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.6e-40 Score=289.12 Aligned_cols=254 Identities=12% Similarity=0.086 Sum_probs=202.3
Q ss_pred EEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC--CCCEEEEEeCC
Q 016257 56 TYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVD 133 (392)
Q Consensus 56 ~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d 133 (392)
...+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++........ ..|.+.|.+++|++ ++++|++|+.|
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l-----~gH~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-----RGHEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEE-----ECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEE-----cCCCccEEEEEeCCCCCCCEEEEEECC
Confidence 345779999999999999999999999999999999987642111111 13788999999986 48999999999
Q ss_pred CcEEEEeCCCCc--eeecccCCCCcEEEEEecCC--CCeEEEEcCCCcEEEEECCCCeee--EEEecCCCcceEEEEecC
Q 016257 134 GHLRIMHWPSLR--IILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVAW--TFLTRNSDEKIELCRFSK 207 (392)
Q Consensus 134 g~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~ 207 (392)
++|++||+++++ ....+..|...|.+++|+|+ +.+|++++.|++|++||++.+... ......+...+.+++|+|
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 160 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECC
T ss_pred CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcc
Confidence 999999998764 45556678789999999997 789999999999999999876322 122233455799999999
Q ss_pred CC-----------------CcceEEEEEEeCCccEEEEEeCCCc---eeeeeecccCCCcEEEEECCCC----CEEEEEe
Q 016257 208 DG-----------------TKPFLFCTVQRGDKALLAVYDISTW---NKIGHKRLLRKPASVLSISLDG----KYLAMGS 263 (392)
Q Consensus 208 ~~-----------------~~~~~~~~~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~ 263 (392)
+. .. +++++.|+.|++||++.. +.+..+..|...|.+++|+|++ ++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-----l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 161 AVVPGSLIDHPSGQKPNYIKR-----FASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp CCCC------CCSCCCCCCCB-----EECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred ccCCccccccccccCccccce-----EEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 83 33 799999999999999754 4566788899999999999986 8999999
Q ss_pred CCCcEEEEecCCc---eeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecC
Q 016257 264 KDGDICVVDVKKM---EINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 264 ~dg~i~iwd~~~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 320 (392)
.|++|++||+++. +........| ...|.+++|+|++++|++++.|+.|++|+....
T Consensus 236 ~D~~v~iw~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 236 QDGRVFIWTCDDASSNTWSPKLLHKF-NDVVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp TTCEEEEEECSSTTCCCCBCCEEEEC-SSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred CCCeEEEEEccCccccchhhhhhhcC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 9999999999863 2112222456 789999999999999999999999999998744
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-39 Score=313.30 Aligned_cols=295 Identities=18% Similarity=0.210 Sum_probs=236.0
Q ss_pred ceEEEeeCCCCCeeEEEEcCCC-CeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC
Q 016257 54 LVTYVFDESEGDPMTIAVNPSG-DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV 132 (392)
Q Consensus 54 ~~~~~~~~h~~~v~~~~~sp~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 132 (392)
.....+++|.+.|++++|+|++ ++|++|+.|++|++|++........... .....|...|.+++|+|++++|++|+.
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~--~~~~~h~~~v~~v~~s~~g~~l~sgs~ 450 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQ--RRLTGHSHFVEDVVLSSDGQFALSGSW 450 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEE--EEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccccc--ceecCCCCcEEEEEECCCCCEEEEEeC
Confidence 3445789999999999999865 6899999999999999976542211110 011247889999999999999999999
Q ss_pred CCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe--cCCCcceEEEEecCCCC
Q 016257 133 DGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT--RNSDEKIELCRFSKDGT 210 (392)
Q Consensus 133 dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~ 210 (392)
|++|++||+.+++....+..|...|.+++|+|++++|++++.|++|++||+.......... ..|...|.+++|+|++.
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 9999999999999888888899999999999999999999999999999986544333222 23455799999999874
Q ss_pred cceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcc
Q 016257 211 KPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTS 290 (392)
Q Consensus 211 ~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 290 (392)
... +++++.|+.|++||+++++....+..|...|++++|+|++++|++|+.||.|++||+++++.+..+. + ...
T Consensus 531 ~~~---l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--~-~~~ 604 (694)
T 3dm0_A 531 QPT---IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE--A-NSV 604 (694)
T ss_dssp SCE---EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB--C-SSC
T ss_pred cce---EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec--C-CCc
Confidence 322 6899999999999999999988999999999999999999999999999999999999998877653 3 568
Q ss_pred eEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee----------------------eeeeeeeeeeceEEEEeeec
Q 016257 291 IALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI----------------------YSLLLALFLASAVVFYIFFE 348 (392)
Q Consensus 291 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~d 348 (392)
|.+++|+|++.+|++++ |+.|++|++........... .............+++++.|
T Consensus 605 v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~D 683 (694)
T 3dm0_A 605 IHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTD 683 (694)
T ss_dssp EEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCC
Confidence 99999999998887765 56799999976543221110 00011112234578888899
Q ss_pred ceeeeeccc
Q 016257 349 NSDSFWNFP 357 (392)
Q Consensus 349 ~~i~~W~~~ 357 (392)
+.|++|++.
T Consensus 684 g~i~iW~i~ 692 (694)
T 3dm0_A 684 GVIRVWGIG 692 (694)
T ss_dssp SEEEEEEC-
T ss_pred CeEEEEecc
Confidence 999999985
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-39 Score=286.43 Aligned_cols=296 Identities=14% Similarity=0.139 Sum_probs=244.6
Q ss_pred CCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe
Q 016257 52 SPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131 (392)
Q Consensus 52 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 131 (392)
.......+.+|.+.|++++|+|++++|++++.||.|++||+.+++....+. .|...|.+++|+|++++|++++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD-------GHTGTIWSIDVDCFTKYCVTGS 93 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh-------hcCCcEEEEEEcCCCCEEEEEe
Confidence 445667789999999999999999999999999999999998877554443 3678999999999999999999
Q ss_pred CCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCC-----CcEEEEECCCCee-----------eEEEecC
Q 016257 132 VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD-----GSARIWKTEDGVA-----------WTFLTRN 195 (392)
Q Consensus 132 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~-----------~~~~~~~ 195 (392)
.||.|++||+++++....+. +...+.+++|+|+++++++++.+ +.|++||++.... ...+..+
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH 172 (369)
T ss_dssp TTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC
T ss_pred CCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC
Confidence 99999999999998877665 67789999999999999999998 9999999976532 2222222
Q ss_pred C-CcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC-ceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEec
Q 016257 196 S-DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST-WNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDV 273 (392)
Q Consensus 196 ~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 273 (392)
. ...+.+++|+|++.. +++++.++.|++||+++ .+.+..+..|...+.+++|+|++++|++++.|+.|++||+
T Consensus 173 ~~~~~~~~~~~~~~~~~-----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 173 EGLDAATVAGWSTKGKY-----IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp TTCCCEEEEEECGGGCE-----EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCccceeEEEEcCCCCE-----EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 1 127999999999987 78899999999999998 7788888889999999999999999999999999999999
Q ss_pred CCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCC--------------eEEEEEeecCccccceee-eeeee--eee
Q 016257 274 KKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEW--------------GAMITKLTVPADWKEWQI-YSLLL--ALF 336 (392)
Q Consensus 274 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~i~iw~~~~~~~~~~~~~-~~~~~--~~~ 336 (392)
++++....+. + ...+..++|+|+++++++++.++ .+++|++........... ...+. ...
T Consensus 248 ~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s 324 (369)
T 3zwl_B 248 STLQVLKKYE--T-DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAIS 324 (369)
T ss_dssp TTCCEEEEEE--C-SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CCCceeeeec--C-CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEEC
Confidence 9998887764 4 78999999999999999999998 899999876544332210 00111 111
Q ss_pred eeceEEEEeeecceeeeeccccccccc
Q 016257 337 LASAVVFYIFFENSDSFWNFPVARNQH 363 (392)
Q Consensus 337 ~~~~~~~~~~~d~~i~~W~~~~~~~~~ 363 (392)
.....+++++.|+.|++|++..+....
T Consensus 325 ~~~~~l~s~~~dg~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 325 PQGTSYASGGEDGFIRLHHFEKSYFDF 351 (369)
T ss_dssp TTSSEEEEEETTSEEEEEEECHHHHTC
T ss_pred CCCCEEEEEcCCCeEEEEECccccchh
Confidence 234577888899999999998876443
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.2e-40 Score=293.17 Aligned_cols=289 Identities=12% Similarity=0.158 Sum_probs=231.0
Q ss_pred CceeeeecCCCC---CcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCC----CC
Q 016257 4 GGTVTCGSWIKR---PENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS----GD 76 (392)
Q Consensus 4 ~~~v~~~~w~~~---~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~----~~ 76 (392)
.++|++++|+|+ +.. .+++. +.++.|.+|++..... . ..........|...|++++|+|+ ++
T Consensus 18 ~~~v~~i~~~p~~~~~~~-~~~~~-------~~~~~v~vw~~~~~~~-~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 86 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDP-LVFAT-------VGSNRVTLYECHSQGE-I--RLLQSYVDADADENFYTCAWTYDSNTSHP 86 (366)
T ss_dssp CSCEEEEEECTTCCTTSC-EEEEE-------EETTEEEEEEECGGGC-E--EEEEEEECSCTTCCEEEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCCCc-eEEEE-------CCCCEEEEEEcCCCcE-E--EeeeeccccCCCCcEEEEEeccCCCCCCC
Confidence 579999999985 333 34442 2244699999873321 0 11111122237789999999998 66
Q ss_pred eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC-CCCEEEEEeCCCcEEEEeCCCCceeecc---cC
Q 016257 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLRIILDE---PK 152 (392)
Q Consensus 77 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~ 152 (392)
+|++|+.||.|++||+.+++....+. .|...|.+++|+| ++++|++++.||.|++||+++++....+ ..
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 159 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYV-------GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG 159 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEE-------SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS
T ss_pred EEEEecCCCEEEEEEchhceEeeeec-------CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc
Confidence 99999999999999998877554443 2778999999999 9999999999999999999998887766 56
Q ss_pred CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEec---------------------------CCCcceEEEEe
Q 016257 153 AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR---------------------------NSDEKIELCRF 205 (392)
Q Consensus 153 ~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---------------------------~~~~~v~~~~~ 205 (392)
|...|.+++|+|++++|++++.|+.|++||+++++....+.. .+...|.+++|
T Consensus 160 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 239 (366)
T 3k26_A 160 HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW 239 (366)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE
T ss_pred ccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEE
Confidence 778999999999999999999999999999987755433221 14558999999
Q ss_pred cCCCCcceEEEEEEeCCccEEEEEeCCCcee--------------eeeecccCCCcEEEEECCC--CCEEEEEeCCCcEE
Q 016257 206 SKDGTKPFLFCTVQRGDKALLAVYDISTWNK--------------IGHKRLLRKPASVLSISLD--GKYLAMGSKDGDIC 269 (392)
Q Consensus 206 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~--------------~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~ 269 (392)
+ +.. +++++.|+.|++||+++.+. +..+..|...+++++|+|+ +++|++|+.||.|+
T Consensus 240 ~--~~~-----l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~ 312 (366)
T 3k26_A 240 L--GDL-----ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLY 312 (366)
T ss_dssp E--TTE-----EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEE
T ss_pred c--CCE-----EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEE
Confidence 9 444 78999999999999987643 6667778889999999999 99999999999999
Q ss_pred EEecCCceeee----eeecccc-CcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 270 VVDVKKMEINH----WSKRLHL-GTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 270 iwd~~~~~~~~----~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
+||+.+++... .+ ..|. ...|++++|+|++++|++++.||.|++|++.
T Consensus 313 vwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 313 VWDLEVEDPHKAKCTTL-THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECCSSSGGGCEEEEE-CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEECCCCCCccccceEE-cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999876432 22 2331 5899999999999999999999999999985
No 59
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-41 Score=303.11 Aligned_cols=294 Identities=12% Similarity=0.146 Sum_probs=240.1
Q ss_pred CCceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCC-CCeEEEE
Q 016257 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS-GDDFVCS 81 (392)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~-~~~l~~~ 81 (392)
...+|++++|+|++.. +++|+. ++.+++|.++.... .......+.+|.+.|.+++|+|+ +++|+++
T Consensus 66 ~~~~v~~~~~s~~~~~---l~~~~~------dg~v~vw~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 132 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKI---IAGALD------NGSLELYSTNEANN----AINSMARFSNHSSSVKTVKFNAKQDNVLASG 132 (416)
T ss_dssp CSSCEEEEEECSSSSC---EEEEES------SSCEEEECCSSTTS----CCCEEEECCCSSSCCCEEEECSSSTTBEEEE
T ss_pred cCCceEEEEECCCCCe---EEEEcc------CCeEEEeecccccc----cccchhhccCCccceEEEEEcCCCCCEEEEE
Confidence 3568999999999853 554444 56799998874221 12355678899999999999998 8999999
Q ss_pred eCCCeEEEEEEeCCc------cceeeccccCCCCCCCCCeEEEEecCC-CCEEEEEeCCCcEEEEeCCCCceeecccCC-
Q 016257 82 TTNGGCKLFEVYGGA------TDINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLRIILDEPKA- 153 (392)
Q Consensus 82 ~~d~~i~iw~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~- 153 (392)
+.|+.|++||+.+.+ ..... .....|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 208 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSNYTPLTP----GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS 208 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTTCCCBCC----CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC
T ss_pred cCCCeEEEEECCCCcccccccccccc----ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc
Confidence 999999999998775 21111 112347789999999998 789999999999999999998887776665
Q ss_pred -----CCcEEEEEecCCC-CeEEEEcCCC---cEEEEECCCC-eeeEEEecCCCcceEEEEecC-CCCcceEEEEEEeCC
Q 016257 154 -----HKSVLDMDFSLDS-EFLATTSTDG---SARIWKTEDG-VAWTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGD 222 (392)
Q Consensus 154 -----~~~i~~i~~~~~~-~~l~~~~~d~---~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~ 222 (392)
...|.+++|+|++ .++++++.|+ .|++||++++ +....+...+...|.+++|+| ++.. +++++.
T Consensus 209 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-----l~s~~~ 283 (416)
T 2pm9_A 209 PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHL-----LLSSGR 283 (416)
T ss_dssp CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSC-----EEEEES
T ss_pred cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCe-----EEEEeC
Confidence 5689999999997 6899999998 9999999986 555555513455899999999 7776 789999
Q ss_pred ccEEEEEeCCCceeeeeecccCCCcEEEEECCCC-CEEEEEeCCCcEEEEecCCceeeeeee------------------
Q 016257 223 KALLAVYDISTWNKIGHKRLLRKPASVLSISLDG-KYLAMGSKDGDICVVDVKKMEINHWSK------------------ 283 (392)
Q Consensus 223 d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~------------------ 283 (392)
|+.|++||+++++.+..+..|...+.+++|+|++ .+|++++.|+.|++||+.+.+......
T Consensus 284 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (416)
T 2pm9_A 284 DNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVS 363 (416)
T ss_dssp SSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------------------
T ss_pred CCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccc
Confidence 9999999999999999999999999999999999 899999999999999998765432210
Q ss_pred ----------------ccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 284 ----------------RLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 284 ----------------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
..| ..++.+++|+|+|++|++++.|+.|+||++..
T Consensus 364 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 364 REESKEKPSVFHLQAPTWY-GEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp ---CCSCCCSSCCCCCSTT-CCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred ccccccccccccccCCccc-cCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 014 56778899999999999999999999998864
No 60
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-39 Score=292.94 Aligned_cols=287 Identities=16% Similarity=0.207 Sum_probs=241.7
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|++++|+|++. ++++|+. ++.|.+|.. .......+.+|...|.+++|+|++++|++++.
T Consensus 108 ~~~v~~~~~s~~~~---~l~~~~~------dg~i~i~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (425)
T 1r5m_A 108 TNQVTCLAWSHDGN---SIVTGVE------NGELRLWNK---------TGALLNVLNFHRAPIVSVKWNKDGTHIISMDV 169 (425)
T ss_dssp CBCEEEEEECTTSS---EEEEEET------TSCEEEEET---------TSCEEEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred CCceEEEEEcCCCC---EEEEEeC------CCeEEEEeC---------CCCeeeeccCCCccEEEEEECCCCCEEEEEec
Confidence 44899999999884 4555444 566889972 33445668899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCC--------CCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCC
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMP--------PLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK 155 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 155 (392)
|+.|++||+.+++....+...... .......+.+++|++++ .+++++.++.|++||+++++....+..|..
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 248 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHG 248 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSS
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCC
Confidence 999999999887755444321110 00011128899999986 688899999999999999888877878888
Q ss_pred cEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCce
Q 016257 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN 235 (392)
Q Consensus 156 ~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~ 235 (392)
.|.+++|+|++++|++++.|+.|++||+++++....+..+ ...+.+++|+|++ . +++++.|+.|++||+++++
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~-~-----l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH-SQSIVSASWVGDD-K-----VISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCC-SSCEEEEEEETTT-E-----EEEEETTSEEEEEETTTTE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCC-CccEEEEEECCCC-E-----EEEEeCCCcEEEEECCCCc
Confidence 9999999999999999999999999999999888888655 4479999999999 4 7899999999999999999
Q ss_pred eeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCce--------------------eeeeeeccccCc--ceEE
Q 016257 236 KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME--------------------INHWSKRLHLGT--SIAL 293 (392)
Q Consensus 236 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--------------------~~~~~~~~~~~~--~i~~ 293 (392)
.+..+..+...+.+++|+|++++|++++.||.|++||+++++ .+..+ ..| .. .|++
T Consensus 322 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~v~~ 399 (425)
T 1r5m_A 322 LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASY-QSS-QDNDYIFD 399 (425)
T ss_dssp EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEE-CCT-TCCCCEEE
T ss_pred EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhh-cCc-ccCCceEE
Confidence 998888899999999999999999999999999999999877 55555 455 44 9999
Q ss_pred EEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 294 VEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 294 ~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
++|+|++++|++++.||.|++|+++
T Consensus 400 ~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 400 LSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEccCCCceEEEEecCceEEEEeec
Confidence 9999999999999999999999985
No 61
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-38 Score=276.24 Aligned_cols=281 Identities=12% Similarity=0.113 Sum_probs=238.1
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|++++| |++. ++++|+. ++.|++|+++ .......+..|...|.+++|+|++++|++++.
T Consensus 18 ~~~v~~~~~-~~~~---~l~s~~~------dg~v~vw~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 79 (313)
T 3odt_A 18 DQDVRDVVA-VDDS---KVASVSR------DGTVRLWSKD--------DQWLGTVVYTGQGFLNSVCYDSEKELLLFGGK 79 (313)
T ss_dssp SSCEEEEEE-EETT---EEEEEET------TSEEEEEEES--------SSEEEEEEEECSSCEEEEEEETTTTEEEEEET
T ss_pred CCCcEEEEe-cCCC---EEEEEEc------CCcEEEEECC--------CCEEEEEeecCCccEEEEEECCCCCEEEEecC
Confidence 568999999 7764 3554444 6789999986 44555677889999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEec
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|+.+++|++........... ...|...|.+++| ++++|++++.|+.|++|| .++....+..+...+.++.|+
T Consensus 80 dg~i~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 80 DTMINGVPLFATSGEDPLYT----LIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVV 151 (313)
T ss_dssp TSCEEEEETTCCTTSCC-CE----ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEE
T ss_pred CCeEEEEEeeecCCCCcccc----hhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEc
Confidence 99999999876542211111 1237789999999 577999999999999999 566667777788899999998
Q ss_pred C-CCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc
Q 016257 164 L-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (392)
Q Consensus 164 ~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~ 242 (392)
| +++++++++.|+.|++|| ..+....+...+...+.+++|+|++. +++++.++.|++||+++++.+..+..
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH------FISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE------EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe------EEEccCCCeEEEEECCchhhhhhhhc
Confidence 8 899999999999999999 45666777765667899999999988 58899999999999999999999999
Q ss_pred cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcc
Q 016257 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 322 (392)
|...+++++|+|++ .|++++.||.|++||+++++....+ ..| ...|.+++|+|+++ +++++.||.|++|++.....
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~-~~~-~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVI-TLP-AISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEE-ECS-SSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEE-ecc-CceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 99999999999999 5889999999999999999988776 467 78999999999998 66799999999999986544
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=283.17 Aligned_cols=296 Identities=15% Similarity=0.188 Sum_probs=230.1
Q ss_pred CCceEEEeeCCCCCeeEEEEcCCCCeEE-EEeC---CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC---C
Q 016257 52 SPLVTYVFDESEGDPMTIAVNPSGDDFV-CSTT---NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---G 124 (392)
Q Consensus 52 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~-~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~ 124 (392)
.......+.+|.+.|.+++|+|+++.++ +|+. |+.|++||+.+++....... .|...|.+++|+|+ +
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~ 80 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI------EKAKPIKCGTFGATSLQQ 80 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE------EESSCEEEEECTTCCTTT
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee------cccCcEEEEEEcCCCCCC
Confidence 3345566788999999999999997554 5555 89999999998764333221 36789999999998 6
Q ss_pred CEEEEEeCCCcEEEEeCCCCc-eeecccCCCCcEEEEE------ecCCCCeEEEEcCCCcEEEEECCCCe-eeEEEecCC
Q 016257 125 SRFAAGGVDGHLRIMHWPSLR-IILDEPKAHKSVLDMD------FSLDSEFLATTSTDGSARIWKTEDGV-AWTFLTRNS 196 (392)
Q Consensus 125 ~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~i~------~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~ 196 (392)
++|++++.||.|++||+++++ ....+..|...|.++. |+|++++|++++.|+.|++||+++++ ....+..+.
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 999999999999999999887 6777778888999995 57899999999999999999999886 666665432
Q ss_pred ---CcceEEEE----ecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECC---CCCEEEEEeCCC
Q 016257 197 ---DEKIELCR----FSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISL---DGKYLAMGSKDG 266 (392)
Q Consensus 197 ---~~~v~~~~----~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg 266 (392)
...+.+++ |+|++.. +++++.|+.|++||+++++... ...+...+.+++|+| ++.+|++++.||
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~-----l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEERV-----VCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCCE-----EEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred CCCCCceEEEEEEeccCCCCCE-----EEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 33688888 7888886 7889999999999999988753 456788999999999 999999999999
Q ss_pred cEEEEecCCceeeeeee----ccccCcceEEEEEeeCCC-eEEEEeCCCeEEEEEeecCccccc-------------eee
Q 016257 267 DICVVDVKKMEINHWSK----RLHLGTSIALVEFCPTQR-VVLTASKEWGAMITKLTVPADWKE-------------WQI 328 (392)
Q Consensus 267 ~i~iwd~~~~~~~~~~~----~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~-------------~~~ 328 (392)
.|++||+++++....+. ..| ...|++++|+|+++ +|++++.||.|++|++........ ...
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAH-KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL 313 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECC-SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred eEEEEeCcCCCcccceeeeccCCC-cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence 99999999877554432 367 89999999999998 899999999999999986543210 000
Q ss_pred ee-------eeeee--eeeceEEE-Eeeecceeeeecccccc
Q 016257 329 YS-------LLLAL--FLASAVVF-YIFFENSDSFWNFPVAR 360 (392)
Q Consensus 329 ~~-------~~~~~--~~~~~~~~-~~~~d~~i~~W~~~~~~ 360 (392)
.. .+... ......++ +++.|+.|++|++...+
T Consensus 314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 314 LQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 00 01111 11223455 67889999999998654
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.1e-39 Score=292.51 Aligned_cols=281 Identities=15% Similarity=0.104 Sum_probs=230.4
Q ss_pred CeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 016257 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL 144 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 144 (392)
.+++++|+|++++|++++.|+.+++||+.+.+....+ .....+....|++++++|++++.||.|++||++++
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 129 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKML--------KRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN 129 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTS--------CSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSC
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEE--------ecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCc
Confidence 4558999999999999999999999998776532221 12244555678999999999999999999999998
Q ss_pred ceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCcc
Q 016257 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (392)
Q Consensus 145 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~ 224 (392)
+....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+. ..|.+++|+|++.. +++++.|+
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~-----l~s~~~d~ 203 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHR-ATVTDIAIIDRGRN-----VLSASLDG 203 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCS-SCEEEEEEETTTTE-----EEEEETTS
T ss_pred ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCC-CcEEEEEEcCCCCE-----EEEEcCCC
Confidence 8887777888899999999999999999999999999999999988887654 58999999999987 78999999
Q ss_pred EEEEEeCCCceeeeeeccc---C---------------------CCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeee
Q 016257 225 LLAVYDISTWNKIGHKRLL---R---------------------KPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH 280 (392)
Q Consensus 225 ~i~v~d~~~~~~~~~~~~~---~---------------------~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 280 (392)
.|++||+++++.+..+..+ . ..+.+++|+|++++|++++.||.|++||+++++...
T Consensus 204 ~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 283 (420)
T 3vl1_A 204 TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI 283 (420)
T ss_dssp CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE
T ss_pred cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE
Confidence 9999999999888776642 2 344455568999999999999999999999998877
Q ss_pred eeeccccCcceEEEEEeeCCC-eEEEEeCCCeEEEEEeecCcc-ccceee--eeeeee-eeeeceEEEEeeecceeeeec
Q 016257 281 WSKRLHLGTSIALVEFCPTQR-VVLTASKEWGAMITKLTVPAD-WKEWQI--YSLLLA-LFLASAVVFYIFFENSDSFWN 355 (392)
Q Consensus 281 ~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~-~~~~~~--~~~~~~-~~~~~~~~~~~~~d~~i~~W~ 355 (392)
.+...| ...|++++|+|+++ +|++++.||.|++|++..... ...... ...... .......+++++.|+.|++|+
T Consensus 284 ~~~~~~-~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 284 QLPSKF-TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EECCTT-SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEE
T ss_pred Eccccc-CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEe
Confidence 776677 88999999999999 999999999999999987643 222211 111111 222445777788999999999
Q ss_pred ccccc
Q 016257 356 FPVAR 360 (392)
Q Consensus 356 ~~~~~ 360 (392)
+..++
T Consensus 363 ~~~~~ 367 (420)
T 3vl1_A 363 ISDPE 367 (420)
T ss_dssp ECCTT
T ss_pred ccCCC
Confidence 98743
No 64
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-38 Score=285.07 Aligned_cols=282 Identities=12% Similarity=0.156 Sum_probs=230.5
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEee-CCCCCeeEEEEcCCCCeEEEEeCC
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFD-ESEGDPMTIAVNPSGDDFVCSTTN 84 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~~~~~d 84 (392)
.+.+++|+++. +++ .+.++.|.+|+++. ......+. .|...|.+++|+|++++|++|+.|
T Consensus 95 ~~~~~~~s~~~----l~~-------~~~d~~v~lw~~~~--------~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d 155 (401)
T 4aez_A 95 YLNLLDWSNLN----VVA-------VALERNVYVWNADS--------GSVSALAETDESTYVASVKWSHDGSFLSVGLGN 155 (401)
T ss_dssp TCBCEEECTTS----EEE-------EEETTEEEEEETTT--------CCEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEeecCCC----EEE-------EECCCeEEEeeCCC--------CcEeEeeecCCCCCEEEEEECCCCCEEEEECCC
Confidence 35567777643 444 22366799998863 22233333 388999999999999999999999
Q ss_pred CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC-CCceeecccCCCCcEEEEEec
Q 016257 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP-SLRIILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~i~~~ 163 (392)
|.|++||+.+++....+. .|...|.+++| ++++|++++.||.|++||++ .......+..|...|.+++|+
T Consensus 156 g~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMA-------GHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR 226 (401)
T ss_dssp SCEEEEETTTCCEEEEEC-------CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEECcCCeEEEEec-------CCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc
Confidence 999999998876554443 37789999999 56799999999999999998 455566677788899999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeC--CccEEEEEeCCCceeeeeec
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG--DKALLAVYDISTWNKIGHKR 241 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~d~~i~v~d~~~~~~~~~~~ 241 (392)
|++++|++++.|+.|++||+++++....+..+ ...|.+++|+|++..+ +++++ .|+.|++||+++++.+..+.
T Consensus 227 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l----l~~~~gs~d~~i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 227 SDGLQLASGGNDNVVQIWDARSSIPKFTKTNH-NAAVKAVAWCPWQSNL----LATGGGTMDKQIHFWNAATGARVNTVD 301 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTCSSEEEEECCC-SSCCCEEEECTTSTTE----EEEECCTTTCEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEccCCCCCccEEecCC-cceEEEEEECCCCCCE----EEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 99999999999999999999999888887655 4579999999988762 34443 79999999999998887765
Q ss_pred ccCCCcEEEEECCCCCEEEE--EeCCCcEEEEecCCceeeeee-eccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 242 LLRKPASVLSISLDGKYLAM--GSKDGDICVVDVKKMEINHWS-KRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 242 ~~~~~v~~~~~s~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
+...+.+++|+|+++++++ |+.||.|++||+.+++..... ...| ...|.+++|+|++++|++++.||.|++|++.
T Consensus 302 -~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h-~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 302 -AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH-DTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp -CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC-SSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred -CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC-CCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 5678999999999999999 448999999999997655443 2577 8899999999999999999999999999998
Q ss_pred cCcc
Q 016257 319 VPAD 322 (392)
Q Consensus 319 ~~~~ 322 (392)
....
T Consensus 380 ~~~~ 383 (401)
T 4aez_A 380 DGDH 383 (401)
T ss_dssp C---
T ss_pred CCcc
Confidence 6654
No 65
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-39 Score=294.90 Aligned_cols=294 Identities=13% Similarity=0.126 Sum_probs=228.5
Q ss_pred CceeeeecCCC-CCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEe
Q 016257 4 GGTVTCGSWIK-RPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (392)
Q Consensus 4 ~~~v~~~~w~~-~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 82 (392)
.++|++++|+| ++ .++++|+. ++.|++|++....... .......+ +|.+.|.+++|+|++++|++++
T Consensus 63 ~~~V~~~~~s~~~~---~~l~s~s~------dg~v~vwd~~~~~~~~--~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 63 PNSITSSAVSPGET---PYLITGSD------QGVIKIWNLKEIIVGE--VYSSSLTY-DCSSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp TSCEEEEEEECSSS---CEEEEEET------TSEEEEEEHHHHHTTC--CCSCSEEE-ECSSCEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEECCCCC---CEEEEecC------CceEEEeECcccccCc--ccceeeec-cCCCCEEEEEEeCCCCEEEEEe
Confidence 47999999999 77 35666554 7789999987411111 11112223 4899999999999999999999
Q ss_pred CCCeEEEEEEe---CCccceeeccccCC-----CCCCCCCeEEEE--ecCCCCEEEEEeCCCcEEEEeCCCCceeecccC
Q 016257 83 TNGGCKLFEVY---GGATDINLLAKKMP-----PLQDAGPQKCLS--FSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK 152 (392)
Q Consensus 83 ~d~~i~iw~~~---~~~~~~~~~~~~~~-----~~~~~~~v~~~~--~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 152 (392)
.|+.|++||+. .++........... ...+...+.++. +++++.+|++++.|+.|++||+++++.+..+..
T Consensus 131 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 131 KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 99999999995 44332221111100 001456777777 668899999999999999999999998888777
Q ss_pred --CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecC----CCCcceEEEEEEeCCccEE
Q 016257 153 --AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK----DGTKPFLFCTVQRGDKALL 226 (392)
Q Consensus 153 --~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~~~d~~i 226 (392)
|...|.+++|+|++++|++++.||.|++||+++++++..+...+...|.+++|+| ++.. +++++.|+.|
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~-----l~s~~~dg~i 285 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI-----VVGGSSKTFL 285 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE-----EEEESTTEEE
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE-----EEEEcCCCcE
Confidence 6779999999999999999999999999999999999888745556899997665 4444 7999999999
Q ss_pred EEEeCCCceeeeeecc--------------------------cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeee
Q 016257 227 AVYDISTWNKIGHKRL--------------------------LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH 280 (392)
Q Consensus 227 ~v~d~~~~~~~~~~~~--------------------------~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 280 (392)
++||+++++.+..+.. |...|++++|+ ++++|++|+.|+.|++||+.+++...
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 9999998887665543 34558889999 77999999999999999999887665
Q ss_pred eeec------------------------------------cccCcceEEEEEeeC--CCeEEEEeCCCeEEEEE
Q 016257 281 WSKR------------------------------------LHLGTSIALVEFCPT--QRVVLTASKEWGAMITK 316 (392)
Q Consensus 281 ~~~~------------------------------------~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~iw~ 316 (392)
.+.. .| ...|++++|+++ +.+|++|+.||.|+||+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYH-HDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC--------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCccccc-ccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 5432 16 778888888887 66888888888888884
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.5e-38 Score=311.69 Aligned_cols=285 Identities=11% Similarity=0.136 Sum_probs=245.6
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|+|++|+|++. ++++|+. ++.|.+|++. .......+.+|.+.|.+++|+|++++|++++.
T Consensus 13 ~~~v~~i~~sp~~~---~la~~~~------~g~v~iwd~~--------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 75 (814)
T 3mkq_A 13 SDRVKGIDFHPTEP---WVLTTLY------SGRVEIWNYE--------TQVEVRSIQVTETPVRAGKFIARKNWIIVGSD 75 (814)
T ss_dssp CSCEEEEEECSSSS---EEEEEET------TSEEEEEETT--------TTEEEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEECCCCC---EEEEEeC------CCEEEEEECC--------CCceEEEEecCCCcEEEEEEeCCCCEEEEEeC
Confidence 56899999999984 4555443 6679999876 44556678899999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceeecccCCCCcEEEEEe
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL-RIILDEPKAHKSVLDMDF 162 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~i~~ 162 (392)
||.|++||+.+++....+. .|.+.|.+++|+|++++|++++.||.|++||++++ .....+..|...|.+++|
T Consensus 76 dg~i~vw~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 76 DFRIRVFNYNTGEKVVDFE-------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp TSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEe-------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEE
Confidence 9999999998887555443 26789999999999999999999999999999887 455566677789999999
Q ss_pred cC-CCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecC--CCCcceEEEEEEeCCccEEEEEeCCCceeeee
Q 016257 163 SL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK--DGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239 (392)
Q Consensus 163 ~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~ 239 (392)
+| +++.|++++.||.|++||+++++....+..++...+.+++|+| ++.. +++++.++.|++||+++++.+..
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----l~~~~~dg~i~~~d~~~~~~~~~ 223 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY-----MITASDDLTIKIWDYQTKSCVAT 223 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE-----EEEECTTSEEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE-----EEEEeCCCEEEEEECCCCcEEEE
Confidence 99 8899999999999999999998888888877766899999999 7776 78999999999999999999988
Q ss_pred ecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCe-EEEEeCCCeEEEEEee
Q 016257 240 KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRV-VLTASKEWGAMITKLT 318 (392)
Q Consensus 240 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~i~iw~~~ 318 (392)
+..|...+++++|+|++++|++++.||.|++||+.+++....+ ..| ...+.+++|+|+++. +++++.|+.+.+|++.
T Consensus 224 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL-NVG-LERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE-CCS-SSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ecC-CCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 9999999999999999999999999999999999998887766 456 789999999999873 2444556678888865
Q ss_pred c
Q 016257 319 V 319 (392)
Q Consensus 319 ~ 319 (392)
.
T Consensus 302 ~ 302 (814)
T 3mkq_A 302 N 302 (814)
T ss_dssp C
T ss_pred C
Confidence 3
No 67
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.3e-37 Score=295.41 Aligned_cols=329 Identities=16% Similarity=0.124 Sum_probs=243.7
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCC-eEEEEe
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGD-DFVCST 82 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~~ 82 (392)
.++|.+++|+|++.. +++++.. .+....++.++ .......+.+|...|.+++|+|+++ .+++++
T Consensus 116 ~~~v~~~~~s~~~~~---l~~~~~~----~~~~~~v~~~d--------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 180 (615)
T 1pgu_A 116 AGPISDISWDFEGRR---LCVVGEG----RDNFGVFISWD--------SGNSLGEVSGHSQRINACHLKQSRPMRSMTVG 180 (615)
T ss_dssp SSCEEEEEECTTSSE---EEEEECC----SSCSEEEEETT--------TCCEEEECCSCSSCEEEEEECSSSSCEEEEEE
T ss_pred cccEEEEEEeCCCCE---EEEeccC----CCCccEEEEEE--------CCCcceeeecCCccEEEEEECCCCCcEEEEEe
Confidence 568999999999854 3333321 12224455555 2234566889999999999999998 799999
Q ss_pred CCCeEEEEEEeCCccceeeccccCCCCCCCC---CeEEEEecCC-CCEEEEEeCCCcEEEEeCCCCceeecc-c---CCC
Q 016257 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAG---PQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLRIILDE-P---KAH 154 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-~---~~~ 154 (392)
.|+.|++||+.+.+....+. .|.. .|.+++|+|+ +++|++++.|+.|++||+++++.+..+ . .|.
T Consensus 181 ~d~~v~vwd~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 253 (615)
T 1pgu_A 181 DDGSVVFYQGPPFKFSASDR-------THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ 253 (615)
T ss_dssp TTTEEEEEETTTBEEEEEEC-------SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC
T ss_pred CCCcEEEEeCCCcceeeeec-------ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccC
Confidence 99999999987766544433 2556 8999999999 999999999999999999999988777 4 677
Q ss_pred CcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecC---------------------------------------
Q 016257 155 KSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRN--------------------------------------- 195 (392)
Q Consensus 155 ~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~--------------------------------------- 195 (392)
..|.+++|+ ++++|++++.|+.|++||+++++.+..+..+
T Consensus 254 ~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 254 GGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVL 332 (615)
T ss_dssp SCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEE
T ss_pred CceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEE
Confidence 799999999 9999999999999999999877665544322
Q ss_pred -----CCcc---------------------------------eEEEEecCCCCcceE-----------------------
Q 016257 196 -----SDEK---------------------------------IELCRFSKDGTKPFL----------------------- 214 (392)
Q Consensus 196 -----~~~~---------------------------------v~~~~~~~~~~~~~~----------------------- 214 (392)
+... |.+++|.+ +..++.
T Consensus 333 ~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~ 411 (615)
T 1pgu_A 333 KTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSK-AQEYSSISWDDTLKVNGITKHEFGSQPKV 411 (615)
T ss_dssp EEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCS-TTCCEEEETTTEEEETTEEEEECSSCEEE
T ss_pred EEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECC-CcEEEEEeCCCCEEEEEcccCcccCCceE
Confidence 1112 33333311 222000
Q ss_pred ---------------------------------------------EEEEEeCC-ccEEEEEeCCCceee-eeecccCCCc
Q 016257 215 ---------------------------------------------FCTVQRGD-KALLAVYDISTWNKI-GHKRLLRKPA 247 (392)
Q Consensus 215 ---------------------------------------------~~~~~~~~-d~~i~v~d~~~~~~~-~~~~~~~~~v 247 (392)
-.+++++. ++.|++||+.+++.. ..+..|...|
T Consensus 412 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v 491 (615)
T 1pgu_A 412 ASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKP 491 (615)
T ss_dssp EEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCE
T ss_pred EEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCce
Confidence 01333444 666777776665444 5566788899
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEee----------CCCeEEEEeCCCeEEEEEe
Q 016257 248 SVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP----------TQRVVLTASKEWGAMITKL 317 (392)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~----------~~~~l~~~~~dg~i~iw~~ 317 (392)
++++|+|++++|++++.||.|++||+.+++.+..+...| ...|++++|+| ++++|++++.||.|++|++
T Consensus 492 ~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~ 570 (615)
T 1pgu_A 492 SYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFR-TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV 570 (615)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCC-SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEES
T ss_pred EEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCC-CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEEC
Confidence 999999999999999999999999999999888764338 89999999999 9999999999999999999
Q ss_pred ecCc-cccce---eeeeeeeeeeeeceEEEEeeecceeeeecccc
Q 016257 318 TVPA-DWKEW---QIYSLLLALFLASAVVFYIFFENSDSFWNFPV 358 (392)
Q Consensus 318 ~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~ 358 (392)
.... ..... .............. +++++.|+.|++|++.+
T Consensus 571 ~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 571 KRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 8752 22211 00111111222334 78888999999999875
No 68
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.3e-38 Score=284.26 Aligned_cols=285 Identities=11% Similarity=0.136 Sum_probs=232.1
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d 84 (392)
+.+.+++|++++ ++++ +.++.|++|+.+.. .......+.+|...|++++|+|+|++|++|+.|
T Consensus 106 ~y~~~l~wS~~n----~lAv-------gld~tV~lWd~~tg------~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D 168 (420)
T 4gga_A 106 YYLNLVDWSSGN----VLAV-------ALDNSVYLWSASSG------DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS 168 (420)
T ss_dssp TTCBCEEECTTS----EEEE-------EETTEEEEEETTTC------CEEEEEECCSTTCCEEEEEECTTSSEEEEEETT
T ss_pred ccceeEEECCCC----EEEE-------EeCCEEEEEECCCC------CEEEEEEecCCCCcEEEEEECCCCCEEEEEECC
Confidence 446779999864 4553 23667999987622 112234456788999999999999999999999
Q ss_pred CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc-eeecccCCCCcEEEEEec
Q 016257 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-IILDEPKAHKSVLDMDFS 163 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~i~~~ 163 (392)
|.|++||+.+++....+. .|...+.++++ ++..|++|+.|+.+++||..... .+..+..|...+..+.|+
T Consensus 169 g~v~iWd~~~~~~~~~~~-------~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~ 239 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRNMT-------SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA 239 (420)
T ss_dssp SCEEEEETTTTEEEEEEC-------CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEEcCCCcEEEEEe-------CCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeec
Confidence 999999999887655443 36778888777 46799999999999999987654 345566777899999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCee----eEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeee
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVA----WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH 239 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~ 239 (392)
|+++++++++.|+.+++|+...++. +.... .+...|.+++|+|.+..++ +...++.|+.|++||+++++....
T Consensus 240 ~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~-~~~~~V~~~~~~p~~~~~l--a~~~gs~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 240 PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPWQSNVL--ATGGGTSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp TTSSEEEEEETTSCEEEEESSCCSSCSCCSEEEC-CCSSCEEEEEECTTCTTEE--EEEECTTTCEEEEEETTTTEEEEE
T ss_pred CCCCeeeeeeccccceEEeeccccccceeeeeec-ccCCceeeeeeCCCcccEE--EEEeecCCCEEEEEeCCcccccee
Confidence 9999999999999999999987653 33333 3455899999999988632 245677899999999999998877
Q ss_pred ecccCCCcEEEEECCCCCEEEEEe--CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEe
Q 016257 240 KRLLRKPASVLSISLDGKYLAMGS--KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKL 317 (392)
Q Consensus 240 ~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 317 (392)
+.. ...+.++.|+|+++.+++++ .|+.|+|||+.+++.+..+ .+| .+.|++++|+|||++|++|+.|++|++|++
T Consensus 317 ~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l-~gH-~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 317 VDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KGH-TSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp EEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CCC-SSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE-cCC-CCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 665 45788999999999988765 7899999999999988877 689 899999999999999999999999999999
Q ss_pred ecCc
Q 016257 318 TVPA 321 (392)
Q Consensus 318 ~~~~ 321 (392)
....
T Consensus 394 ~~~~ 397 (420)
T 4gga_A 394 FELD 397 (420)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 7543
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-39 Score=313.50 Aligned_cols=200 Identities=7% Similarity=0.062 Sum_probs=163.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|+|++|+|++ .++++|+. ++.|++|..+ ....... ..|...|.+++|+| +++|++++.
T Consensus 17 ~~~V~~lafspdg---~~lAsgs~------Dg~I~lw~~~--------~~~~~~~-~~~~~~V~~l~fsp-g~~L~S~s~ 77 (902)
T 2oaj_A 17 SSKPIAAAFDFTQ---NLLAIATV------TGEVHIYGQQ--------QVEVVIK-LEDRSAIKEMRFVK-GIYLVVINA 77 (902)
T ss_dssp SSCEEEEEEETTT---TEEEEEET------TSEEEEECST--------TCEEEEE-CSSCCCEEEEEEET-TTEEEEEET
T ss_pred CCCcEEEEECCCC---CEEEEEeC------CCEEEEEeCC--------CcEEEEE-cCCCCCEEEEEEcC-CCEEEEEEC
Confidence 4689999999998 45776665 6779998654 2222222 34788999999999 889999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCcee-----------ecccC
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRII-----------LDEPK 152 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~ 152 (392)
|++|++||+.+++....+. |...|++++|+|++++|++|+.||.|++||+++++.. .....
T Consensus 78 D~~v~lWd~~~~~~~~~~~--------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~ 149 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTVF--------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAA 149 (902)
T ss_dssp TCEEEEEETTTCSEEEEEE--------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSS
T ss_pred cCeEEEEECCCCcEEEEEc--------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccccccccc
Confidence 9999999998876544432 4578999999999999999999999999999987753 22345
Q ss_pred CCCcEEEEEecCC-CCeEEEEcCCCcEEEEECCCCeeeEEEecC-----------------CCcceEEEEecCCCCcceE
Q 016257 153 AHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRN-----------------SDEKIELCRFSKDGTKPFL 214 (392)
Q Consensus 153 ~~~~i~~i~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~~~~ 214 (392)
|.+.|.+++|+|+ +..+++++.|+.| +||+++++.+..+..+ +...|.+++|+|++..
T Consensus 150 h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~--- 225 (902)
T 2oaj_A 150 RLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH--- 225 (902)
T ss_dssp CCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE---
T ss_pred CCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE---
Confidence 6679999999996 5789999999999 9999999988887644 1346999999999987
Q ss_pred EEEEEeCCccEEEEEeCCCcee
Q 016257 215 FCTVQRGDKALLAVYDISTWNK 236 (392)
Q Consensus 215 ~~~~~~~~d~~i~v~d~~~~~~ 236 (392)
+++++.|+.|++||++++++
T Consensus 226 --lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 226 --IITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp --EEEEETTCCEEEEETTTCCE
T ss_pred --EEEEECCCeEEEEECCCCcE
Confidence 89999999999999876543
No 70
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.8e-39 Score=285.69 Aligned_cols=289 Identities=11% Similarity=0.085 Sum_probs=224.9
Q ss_pred CceEEEeeCCCCCeeEEEEcCCC-CeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC-CCCEEEEE
Q 016257 53 PLVTYVFDESEGDPMTIAVNPSG-DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAG 130 (392)
Q Consensus 53 ~~~~~~~~~h~~~v~~~~~sp~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 130 (392)
......+.+|.+.|++++|+|++ ++|++|+.|+.|++||+.+.+....+.. ..|...|.+++|+| ++++|+++
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG-----MGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC-----CSTTCBEEEEEEETTEEEEEEEE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec-----CCcCCceeEEEeCCCCCCEEEEE
Confidence 44566788999999999999999 8999999999999999987765433321 24788999999999 78999999
Q ss_pred eCCCcEEEEeCCCCceeecccCCC---CcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecC
Q 016257 131 GVDGHLRIMHWPSLRIILDEPKAH---KSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK 207 (392)
Q Consensus 131 ~~dg~i~i~d~~~~~~~~~~~~~~---~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 207 (392)
+.|+.|++||+++ +....+..+. ..|.+++|+|++++|++++.|+.|++||+ +++.+..+..+. ..|.+++|+|
T Consensus 138 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~-~~v~~~~~~~ 214 (383)
T 3ei3_B 138 SIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK-AKVTHAEFNP 214 (383)
T ss_dssp ETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS-SCEEEEEECS
T ss_pred eCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC-CcEEEEEECC
Confidence 9999999999986 4444443333 57999999999999999999999999999 567777777654 4899999999
Q ss_pred CCCcceEEEEEEeCCccEEEEEeCCC----ceeeeeecccCCCcEEEEECC-CCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 208 DGTKPFLFCTVQRGDKALLAVYDIST----WNKIGHKRLLRKPASVLSISL-DGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 208 ~~~~~~~~~~~~~~~d~~i~v~d~~~----~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
++... +++++.|+.|++||+++ +..+..+ .|...+.+++|+| ++++|++++.|+.|++||+++++....+
T Consensus 215 ~~~~~----l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 215 RCDWL----MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp SCTTE----EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred CCCCE----EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 99831 78999999999999998 4555444 6889999999999 9999999999999999999987765444
Q ss_pred eccc----------------cCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee---eeeeee-eee-eceE
Q 016257 283 KRLH----------------LGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI---YSLLLA-LFL-ASAV 341 (392)
Q Consensus 283 ~~~~----------------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~-~~~-~~~~ 341 (392)
. .| ....+..++|+|++++ +++.||.|++|++........... ...... .+. ....
T Consensus 290 ~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~ 366 (383)
T 3ei3_B 290 I-IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDV 366 (383)
T ss_dssp E-ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSE
T ss_pred c-cccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccE
Confidence 2 11 0234555777777776 778999999999986654332211 111111 122 3334
Q ss_pred EEEeeecceeeeecccc
Q 016257 342 VFYIFFENSDSFWNFPV 358 (392)
Q Consensus 342 ~~~~~~d~~i~~W~~~~ 358 (392)
++++ .|+.|++|++.+
T Consensus 367 l~s~-sd~~i~iw~~~~ 382 (383)
T 3ei3_B 367 LASG-MGFNILIWNRED 382 (383)
T ss_dssp EEEE-ETTEEEEEECC-
T ss_pred EEEe-cCCcEEEEecCC
Confidence 5555 499999999864
No 71
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.6e-38 Score=278.65 Aligned_cols=259 Identities=12% Similarity=0.079 Sum_probs=215.8
Q ss_pred EEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC--CCCEEEEEeCC
Q 016257 56 TYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGVD 133 (392)
Q Consensus 56 ~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d 133 (392)
...+.+|.+.|++++|+|++++|++++.||.|++||+.+........... ..|...|.+++|+| ++++|++++.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSW---RAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEE---ECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceeccee---ccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 44578999999999999999999999999999999998764332221111 13788999999999 69999999999
Q ss_pred CcEEEEeCCCC---------ceeecccCCCCcEEEEEecCC--CCeEEEEcCCCcEEEEECCCCeeeEEEe---------
Q 016257 134 GHLRIMHWPSL---------RIILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVAWTFLT--------- 193 (392)
Q Consensus 134 g~i~i~d~~~~---------~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~--------- 193 (392)
|.|++||++++ +....+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+.
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 99999999876 445566777889999999999 9999999999999999998876544332
Q ss_pred ---cCCCcceEEEEecCC---CCcceEEEEEEeCCccEEEEEeCCCcee--eeeecccCCCcEEEEECCCC----CEEEE
Q 016257 194 ---RNSDEKIELCRFSKD---GTKPFLFCTVQRGDKALLAVYDISTWNK--IGHKRLLRKPASVLSISLDG----KYLAM 261 (392)
Q Consensus 194 ---~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~----~~l~~ 261 (392)
..+...+.+++|+|+ +.. +++++.++.+.+|+...++. +..+..|...|++++|+|++ ++|++
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s 235 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEK-----LAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIAT 235 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCE-----EEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEE
T ss_pred cccCCcccceeEEEeccCCCCCcE-----EEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEE
Confidence 134557999999997 664 78889999998888877664 56677889999999999998 89999
Q ss_pred EeCCCcEEEEecCCc----------------------------------------------eeeeeeeccccCcceEEEE
Q 016257 262 GSKDGDICVVDVKKM----------------------------------------------EINHWSKRLHLGTSIALVE 295 (392)
Q Consensus 262 ~~~dg~i~iwd~~~~----------------------------------------------~~~~~~~~~~~~~~i~~~~ 295 (392)
++.||.|++||++++ +.+..+ .+| ...|++++
T Consensus 236 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~~~ 313 (351)
T 3f3f_A 236 GCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH-DDH-NGEVWSVS 313 (351)
T ss_dssp EETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEE-CTT-SSCEEEEE
T ss_pred EcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE-ecc-cccEEEEE
Confidence 999999999999875 333333 567 88999999
Q ss_pred EeeCCCeEEEEeCCCeEEEEEeecCcccc
Q 016257 296 FCPTQRVVLTASKEWGAMITKLTVPADWK 324 (392)
Q Consensus 296 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 324 (392)
|+|++++|++++.||.|++|++.....+.
T Consensus 314 ~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 314 WNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp ECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred EcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 99999999999999999999999766543
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-38 Score=309.25 Aligned_cols=334 Identities=12% Similarity=0.051 Sum_probs=239.0
Q ss_pred CCceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEe
Q 016257 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (392)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 82 (392)
...+|.+++|+| +. ++++++ .++.|++|+++. ......+. |.+.|++++|+|++++|++|+
T Consensus 57 ~~~~V~~l~fsp-g~---~L~S~s------~D~~v~lWd~~~--------~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs 117 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GI---YLVVIN------AKDTVYVLSLYS--------QKVLTTVF-VPGKITSIDTDASLDWMLIGL 117 (902)
T ss_dssp SCCCEEEEEEET-TT---EEEEEE------TTCEEEEEETTT--------CSEEEEEE-CSSCEEEEECCTTCSEEEEEE
T ss_pred CCCCEEEEEEcC-CC---EEEEEE------CcCeEEEEECCC--------CcEEEEEc-CCCCEEEEEECCCCCEEEEEc
Confidence 356899999999 53 345444 377899999873 23334454 678999999999999999999
Q ss_pred CCCeEEEEEEeCCccceeecc----cc-CCCCCCCCCeEEEEecCC-CCEEEEEeCCCcEEEEeCCCCceeecccCC---
Q 016257 83 TNGGCKLFEVYGGATDINLLA----KK-MPPLQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLRIILDEPKA--- 153 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~~~~~~~----~~-~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--- 153 (392)
.||.|++||+.+.+.. .+.. .. .....|.+.|.+++|+|+ +..|++|+.|+.| +||+++++....+..+
T Consensus 118 ~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~ 195 (902)
T 2oaj_A 118 QNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPP 195 (902)
T ss_dssp TTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCT
T ss_pred CCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCC
Confidence 9999999999877642 1110 00 122357889999999995 5789999999999 9999998876655433
Q ss_pred ---------------CCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEE--Ee---cC------------CCcceE
Q 016257 154 ---------------HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTF--LT---RN------------SDEKIE 201 (392)
Q Consensus 154 ---------------~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~--~~---~~------------~~~~v~ 201 (392)
...|.+++|+|++++|++++.|++|++||+++++++.. +. .+ +...|.
T Consensus 196 g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~ 275 (902)
T 2oaj_A 196 FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKIS 275 (902)
T ss_dssp TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEE
T ss_pred cCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCee
Confidence 35799999999999999999999999999988766542 10 01 112344
Q ss_pred EEEec----CCCCcc-----------------------------------------------------------------
Q 016257 202 LCRFS----KDGTKP----------------------------------------------------------------- 212 (392)
Q Consensus 202 ~~~~~----~~~~~~----------------------------------------------------------------- 212 (392)
+++|+ |++..+
T Consensus 276 ~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~s 355 (902)
T 2oaj_A 276 KVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQS 355 (902)
T ss_dssp EEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSC
T ss_pred EEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCC
Confidence 44442 110000
Q ss_pred --------------------------------------------------------------------------------
Q 016257 213 -------------------------------------------------------------------------------- 212 (392)
Q Consensus 213 -------------------------------------------------------------------------------- 212 (392)
T Consensus 356 p~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~ 435 (902)
T 2oaj_A 356 PYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGV 435 (902)
T ss_dssp SHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSB
T ss_pred CCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCc
Confidence
Q ss_pred ----------eEEEEEEeCCccEEEEEeCCCceeee--ee---------cccCCCcEEEEECCCCCEEEEEeCCCcEEEE
Q 016257 213 ----------FLFCTVQRGDKALLAVYDISTWNKIG--HK---------RLLRKPASVLSISLDGKYLAMGSKDGDICVV 271 (392)
Q Consensus 213 ----------~~~~~~~~~~d~~i~v~d~~~~~~~~--~~---------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 271 (392)
---.+++++.|++|++||+.++.... .+ ..|...|.+++|+|++++||+|+.||+|+||
T Consensus 436 ~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lw 515 (902)
T 2oaj_A 436 RTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLF 515 (902)
T ss_dssp CCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEE
Confidence 00124566677777777776653210 01 1567789999999999999999999999999
Q ss_pred ecCCce---------------------------------------------eeeeeeccccCcceEEEEEeeCCCeEEEE
Q 016257 272 DVKKME---------------------------------------------INHWSKRLHLGTSIALVEFCPTQRVVLTA 306 (392)
Q Consensus 272 d~~~~~---------------------------------------------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 306 (392)
|+.+++ ++..+ .+| .+.|++++|+||| +||+|
T Consensus 516 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l-~~h-~~~V~svafSpdG-~lAsg 592 (902)
T 2oaj_A 516 KYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV-HAN-KGKTSAINNSNIG-FVGIA 592 (902)
T ss_dssp EEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE-CCC-SCSEEEEEECBTS-EEEEE
T ss_pred EecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEE-EcC-CCcEEEEEecCCc-EEEEE
Confidence 998763 12223 568 8999999999999 99999
Q ss_pred eCCCeEEEEEeecCccc--------------cceeeeeeeeeeee---eceEEEEeeecceeeeecc---cccc
Q 016257 307 SKEWGAMITKLTVPADW--------------KEWQIYSLLLALFL---ASAVVFYIFFENSDSFWNF---PVAR 360 (392)
Q Consensus 307 ~~dg~i~iw~~~~~~~~--------------~~~~~~~~~~~~~~---~~~~~~~~~~d~~i~~W~~---~~~~ 360 (392)
+.|++|++||+..+... .++.+.+++..... .+..+++++.|++|++|++ .+|+
T Consensus 593 s~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 593 YAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp ETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred eCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 99999999998654211 13344444111111 1357788889999999999 6665
No 73
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-38 Score=283.29 Aligned_cols=289 Identities=13% Similarity=0.135 Sum_probs=232.6
Q ss_pred EeeCCCCCeeEEEEcCC----CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC----CCEEEE
Q 016257 58 VFDESEGDPMTIAVNPS----GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD----GSRFAA 129 (392)
Q Consensus 58 ~~~~h~~~v~~~~~sp~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~ 129 (392)
...+|.++|++++|+|+ ...+++++.++.|++|++.+++....+.... ...|...|.+++|+|+ +++|++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYV--DADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEE--CSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecc--ccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 45689999999999984 4567777777899999999776554443222 1236688999999998 679999
Q ss_pred EeCCCcEEEEeCCCCceeecccCCCCcEEEEEecC-CCCeEEEEcCCCcEEEEECCCCeeeEEEe--cCCCcceEEEEec
Q 016257 130 GGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFLT--RNSDEKIELCRFS 206 (392)
Q Consensus 130 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~ 206 (392)
|+.||.|++||+++++.+..+..|...|.+++|+| ++++|++++.||.|++||+++++.+..+. ..+...|.+++|+
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 99999999999999999888888888999999999 89999999999999999999999888873 2455689999999
Q ss_pred CCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc----------------------------cCCCcEEEEECCCCCE
Q 016257 207 KDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL----------------------------LRKPASVLSISLDGKY 258 (392)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~----------------------------~~~~v~~~~~s~~~~~ 258 (392)
|++.. +++++.|+.|++||+++++....+.. |...|.+++|+ +++
T Consensus 171 ~~~~~-----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 243 (366)
T 3k26_A 171 LLGEK-----IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL 243 (366)
T ss_dssp TTSSE-----EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE
T ss_pred CCCCE-----EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE
Confidence 99987 78999999999999998765544333 88899999998 779
Q ss_pred EEEEeCCCcEEEEecCCcee--------------eeeeeccccCcceEEEEEeeC--CCeEEEEeCCCeEEEEEeecCcc
Q 016257 259 LAMGSKDGDICVVDVKKMEI--------------NHWSKRLHLGTSIALVEFCPT--QRVVLTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 259 l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~ 322 (392)
|++++.|+.|++||+.+++. ...+ ..| ...|++++|+|+ +++|++++.||.|++|++.....
T Consensus 244 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 244 ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF-DYS-QCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE-ECS-SCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred EEEEecCCEEEEEeCCCccccccccccCCcchheeccc-ccc-CCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 99999999999999987643 3333 467 788999999999 99999999999999999987643
Q ss_pred cc----ceee---eeeee--eeeeeceEEEEeeecceeeeeccc
Q 016257 323 WK----EWQI---YSLLL--ALFLASAVVFYIFFENSDSFWNFP 357 (392)
Q Consensus 323 ~~----~~~~---~~~~~--~~~~~~~~~~~~~~d~~i~~W~~~ 357 (392)
.. .+.. ...+. ........+++++.|+.|++||+.
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 322 HKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp GGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 32 1110 01111 111234578888899999999975
No 74
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.5e-38 Score=299.32 Aligned_cols=320 Identities=13% Similarity=0.057 Sum_probs=255.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCC-eeEEEEcC--CCCeEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGD-PMTIAVNP--SGDDFVC 80 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~sp--~~~~l~~ 80 (392)
.+.|.+++|+|+++. +++|+ ++.+.+|+++.... .......+.+|.+. |++++|+| ++++|++
T Consensus 18 ~~~v~~~~~spdg~~---l~~~~-------~~~v~v~~~~~~~~----~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNA---IAYPC-------GKSAFVRCLDDGDS----KVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCS 83 (615)
T ss_dssp TTCCCCCEEETTTTE---EEEEE-------TTEEEEEECCSSCC----SSCSEEEECTTTTSCEEEEEECSSTTCCEEEE
T ss_pred cCceeEEEECCCCCE---EEEec-------CCeEEEEECCCCCC----ccccceEEecCCCceEEEEEECcCCCCCEEEE
Confidence 468999999999854 44332 45688998873211 11455678999999 99999999 9999999
Q ss_pred EeCCCeEEEEEEeCC--------ccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC----CcEEEEeCCCCceee
Q 016257 81 STTNGGCKLFEVYGG--------ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----GHLRIMHWPSLRIIL 148 (392)
Q Consensus 81 ~~~d~~i~iw~~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~~~ 148 (392)
++.||.|++||+.++ +....+. .|...|.+++|+|++++|++++.+ +.|++|| .++...
T Consensus 84 ~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~ 154 (615)
T 1pgu_A 84 GDESGKVIVWGWTFDKESNSVEVNVKSEFQ-------VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLG 154 (615)
T ss_dssp EETTSEEEEEEEEEEGGGTEEEEEEEEEEE-------CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEE
T ss_pred ecCCCEEEEEeCCCCcccccccccccchhh-------cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcce
Confidence 999999999999754 2111111 267899999999999999999987 6788887 567777
Q ss_pred cccCCCCcEEEEEecCCCC-eEEEEcCCCcEEEEECCCCeeeEEEecCCCc---ceEEEEecCC-CCcceEEEEEEeCCc
Q 016257 149 DEPKAHKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDE---KIELCRFSKD-GTKPFLFCTVQRGDK 223 (392)
Q Consensus 149 ~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~~~~~~~~~d 223 (392)
.+..|...|.+++|+|+++ .+++++.|+.|++||+++++.+..+..+ .. .|.+++|+|+ +.. +++++.|
T Consensus 155 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~-----l~~~~~d 228 (615)
T 1pgu_A 155 EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-HKQGSFVRDVEFSPDSGEF-----VITVGSD 228 (615)
T ss_dssp ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS-SCTTCCEEEEEECSTTCCE-----EEEEETT
T ss_pred eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-CCCCceEEEEEECCCCCCE-----EEEEeCC
Confidence 7888888999999999998 7999999999999999999998888765 34 6999999999 886 7889999
Q ss_pred cEEEEEeCCCceeeeee-c---ccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecc---ccCcceEEEEE
Q 016257 224 ALLAVYDISTWNKIGHK-R---LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL---HLGTSIALVEF 296 (392)
Q Consensus 224 ~~i~v~d~~~~~~~~~~-~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~i~~~~~ 296 (392)
+.|++||+++++.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++....+... + ...+.++.|
T Consensus 229 g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~ 306 (615)
T 1pgu_A 229 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL-GNQQVGVVA 306 (615)
T ss_dssp CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG-GGCEEEEEE
T ss_pred CeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcc-cCceeEEEe
Confidence 99999999999988888 5 789999999999 9999999999999999999999887766422 2 467888888
Q ss_pred eeCCCeEEEEeCCCeEEEEEeecCcccccee-eeeeeeeeeeeceEEEEeeecceeeeeccc
Q 016257 297 CPTQRVVLTASKEWGAMITKLTVPADWKEWQ-IYSLLLALFLASAVVFYIFFENSDSFWNFP 357 (392)
Q Consensus 297 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~ 357 (392)
+ ++.++++++.||.|++|++.......... ....+..... .. +++++.|+.|++|++.
T Consensus 307 ~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 307 T-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP-LISGSYDGRIMEWSSS 365 (615)
T ss_dssp E-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT-TEEEETTSCEEETTTT
T ss_pred C-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC-cEEECCCCeEEEEEch
Confidence 6 88999999999999999987543322111 0001111122 22 6777788888888876
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-38 Score=271.35 Aligned_cols=289 Identities=11% Similarity=0.108 Sum_probs=232.9
Q ss_pred CCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe
Q 016257 52 SPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131 (392)
Q Consensus 52 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 131 (392)
.......+.+|.+.|++++| |++++|++++.||.|++||+.+.+....+. .|...|.+++|+|++++|++++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY-------TGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE-------ECSSCEEEEEEETTTTEEEEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee-------cCCccEEEEEECCCCCEEEEec
Confidence 34566788999999999999 999999999999999999998776444433 2578999999999999999999
Q ss_pred CCCcEEEEeCCCC---ceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecC-
Q 016257 132 VDGHLRIMHWPSL---RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSK- 207 (392)
Q Consensus 132 ~dg~i~i~d~~~~---~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~- 207 (392)
.|+.+++|++... +....+..|...|.++.| +++++++++.|+.|++|| .++....+..+ ...+.+++|.|
T Consensus 79 ~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~-~~~v~~~~~~~~ 153 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAH-NASVWDAKVVSF 153 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECC-SSCEEEEEEEET
T ss_pred CCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccC-CCceeEEEEccC
Confidence 9999999998654 445566677789999999 577999999999999999 56666676655 45799999998
Q ss_pred CCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc-cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccc
Q 016257 208 DGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLH 286 (392)
Q Consensus 208 ~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 286 (392)
++.. +++++.|+.|++||.. +....+.. +...+.+++|+|++. +++++.||.|++||+++++....+ ..|
T Consensus 154 ~~~~-----l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~-~~~ 224 (313)
T 3odt_A 154 SENK-----FLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY-EGH 224 (313)
T ss_dssp TTTE-----EEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE-ECC
T ss_pred CCCE-----EEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh-hcC
Confidence 6775 7889999999999943 45555555 788999999999998 999999999999999999888776 578
Q ss_pred cCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceeeee-eee-eeeeeceEEEEeeecceeeeecccccccccC
Q 016257 287 LGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQIYS-LLL-ALFLASAVVFYIFFENSDSFWNFPVARNQHG 364 (392)
Q Consensus 287 ~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~ 364 (392)
...|++++|+|++ .|++++.||.|++|++............. .+. ..+...+.+++++.|+.|++|++..++....
T Consensus 225 -~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 225 -ESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp -SSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC-
T ss_pred -CceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeeh
Confidence 8999999999999 68999999999999998665433221110 111 1122233467788999999999998775543
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.8e-39 Score=327.93 Aligned_cols=346 Identities=15% Similarity=0.151 Sum_probs=275.5
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|.+++|+|++. ++++|+. ++.+++|+++ .......+.+|.+.|.+++|+|++++|++++.
T Consensus 840 ~~~v~~~~~sp~~~---~l~~~~~------dg~v~vwd~~--------~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDH---LAVIALS------QYCVELWNID--------SRLKVADCRGHLSWVHGVMFSPDGSSFLTASD 902 (1249)
T ss_dssp SSCCCEEEECSSTT---EEEEECS------SSCEEEEETT--------TTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCceEEEEEcCCCC---EEEEEeC------CCeEEEEEcC--------CCceeeecCCCccceEEEEECCCCCEEEEEeC
Confidence 46899999999884 4555554 5669999887 44556778899999999999999999999999
Q ss_pred CCeEEEEEEeCCcccee----------------------------ecccc--CCCCCCCCCeEEEEecCCCCEEEEEeCC
Q 016257 84 NGGCKLFEVYGGATDIN----------------------------LLAKK--MPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~----------------------------~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (392)
|+.|++|++.+...... ..... .....+...+.+++|+|+++++++|+.+
T Consensus 903 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~ 982 (1249)
T 3sfz_A 903 DQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED 982 (1249)
T ss_dssp TSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC
Confidence 99999999754211000 00000 0001134679999999999999999999
Q ss_pred CcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcce
Q 016257 134 GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (392)
Q Consensus 134 g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (392)
|.|++|++.+++.......|...|.+++|+|++++|++++.|+.|++||+.+++..... .+...+.+++|+|++.
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~--- 1057 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ--AHQETVKDFRLLQDSR--- 1057 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB--CCSSCEEEEEECSSSE---
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEe--cCCCcEEEEEEcCCCc---
Confidence 99999999999988888888889999999999999999999999999999998776432 3456899999999876
Q ss_pred EEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEE
Q 016257 214 LFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL 293 (392)
Q Consensus 214 ~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~ 293 (392)
+++++.|+.|++||+.+++....+..|...|++++|+|+++++++++.|+.|++||+.+++....+ .+| ...|++
T Consensus 1058 ---l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l-~~h-~~~v~~ 1132 (1249)
T 3sfz_A 1058 ---LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHEL-KGH-NGCVRC 1132 (1249)
T ss_dssp ---EEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCC-CCC-SSCEEE
T ss_pred ---EEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeee-ccC-CCcEEE
Confidence 688899999999999999999999999999999999999999999999999999999999877766 578 889999
Q ss_pred EEEeeCCCeEEEEeCCCeEEEEEeecCccccce-----------------eeeeeeeeeeeeceEEEEeeecceeeeecc
Q 016257 294 VEFCPTQRVVLTASKEWGAMITKLTVPADWKEW-----------------QIYSLLLALFLASAVVFYIFFENSDSFWNF 356 (392)
Q Consensus 294 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~ 356 (392)
++|+|+|++|++++.||.|++|++..+...... .+.+++. ...++++ ++.+++||+
T Consensus 1133 ~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~d-----g~~l~s~--~g~v~vwd~ 1205 (1249)
T 3sfz_A 1133 SAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPD-----SKTLVSA--GGYLKWWNV 1205 (1249)
T ss_dssp EEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTT-----SSCEEEE--SSSEEEBCS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCC-----CCEEEEC--CCeEEEEEC
Confidence 999999999999999999999999866543321 2222222 2233333 489999999
Q ss_pred cccccccCCC-CcccccCCCCCccccce
Q 016257 357 PVARNQHGGP-KIESILRDPQSSDDQNM 383 (392)
Q Consensus 357 ~~~~~~~~~p-~~~~~~~~~~~~~~~~~ 383 (392)
.+++.+.... ...++.....+.++..+
T Consensus 1206 ~~g~~~~~~~~~~~~i~~~~~s~dg~~l 1233 (1249)
T 3sfz_A 1206 ATGDSSQTFYTNGTNLKKIHVSPDFRTY 1233 (1249)
T ss_dssp SSCBCCCCCCCSSCCCCCCEECSSSCCE
T ss_pred CCCceeeeeeccCCcccEEEECCCCCEE
Confidence 9988765543 33344444444444443
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=288.49 Aligned_cols=298 Identities=13% Similarity=0.133 Sum_probs=228.0
Q ss_pred CCceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCcc---ccCCceEEEeeCCC------------CCee
Q 016257 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSV---YTSPLVTYVFDESE------------GDPM 67 (392)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~---~~~~~~~~~~~~h~------------~~v~ 67 (392)
...+|+|++|+|++. ++++|+. ++.|++|+++...... .........+.+|. +.|+
T Consensus 27 ~~~~V~~v~~s~~g~---~la~g~~------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~ 97 (447)
T 3dw8_B 27 EADIISTVEFNHSGE---LLATGDK------GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN 97 (447)
T ss_dssp GGGSEEEEEECSSSS---EEEEEET------TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC
T ss_pred ccCcEEEEEECCCCC---EEEEEcC------CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE
Confidence 357999999999884 5665554 6779999997543110 01222456788998 8899
Q ss_pred EEEEcCCC--CeEEEEeCCCeEEEEEEeCCccceeecc---------------------------------ccCCCCCCC
Q 016257 68 TIAVNPSG--DDFVCSTTNGGCKLFEVYGGATDINLLA---------------------------------KKMPPLQDA 112 (392)
Q Consensus 68 ~~~~sp~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~---------------------------------~~~~~~~~~ 112 (392)
+++|+|++ ..|++++.|+.|++|++...+....... .......|.
T Consensus 98 ~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 177 (447)
T 3dw8_B 98 KIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT 177 (447)
T ss_dssp EEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred EEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence 99999998 7999999999999999987443110000 000013488
Q ss_pred CCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc-eee-------cccCCCCcEEEEEecCCC-CeEEEEcCCCcEEEEEC
Q 016257 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-IIL-------DEPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKT 183 (392)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~~-------~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~vwd~ 183 (392)
..|.+++|+|++++|++| .|+.|++||+++.. ... .+..|...|.+++|+|++ ++|++++.||.|++||+
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred cceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 899999999999999998 79999999998443 332 245677789999999998 99999999999999999
Q ss_pred CCCee----eEEEecCCC-----------cceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC-ceeeeeecccCCC-
Q 016257 184 EDGVA----WTFLTRNSD-----------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST-WNKIGHKRLLRKP- 246 (392)
Q Consensus 184 ~~~~~----~~~~~~~~~-----------~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~- 246 (392)
++++. ...+..+.. ..|.+++|+|++.. +++++. +.|++||+++ ++++..+..|...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-----l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-----MMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-----EEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCE-----EEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 98876 666665543 27999999999996 677777 9999999997 7777777766431
Q ss_pred --------------cEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec----------------------------
Q 016257 247 --------------ASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR---------------------------- 284 (392)
Q Consensus 247 --------------v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------------------------- 284 (392)
+..++|+|++++|++|+.||.|++||+.+++.......
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISV 410 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEG
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccc
Confidence 23489999999999999999999999998876542110
Q ss_pred ---cccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 285 ---LHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 285 ---~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
.+ ...|..++|+|++.+|++++.+ .+++|.-+
T Consensus 411 ~~~~~-~~~i~~~~~~p~~~~la~~~~~-~~~~~~~~ 445 (447)
T 3dw8_B 411 DSLDF-NKKILHTAWHPKENIIAVATTN-NLYIFQDK 445 (447)
T ss_dssp GGCCT-TSCCCEEEECSSSSEEEEECSS-CEEEEECC
T ss_pred ccccc-CCceeEEEECCCCCEEEEEecc-eeeeeccc
Confidence 12 4578999999999999999887 47777643
No 78
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-39 Score=291.16 Aligned_cols=262 Identities=8% Similarity=0.067 Sum_probs=211.7
Q ss_pred CceEEEe-eCCCCCeeEEEEcC-CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE
Q 016257 53 PLVTYVF-DESEGDPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG 130 (392)
Q Consensus 53 ~~~~~~~-~~h~~~v~~~~~sp-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 130 (392)
......+ .+|.+.|++++|+| ++++|++|+.||.|++||+.+.+...... ......|...|.+++|+|++++|+++
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS--SSLTYDCSSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS--CSEEEECSSCEEEEEECTTSSEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc--eeeeccCCCCEEEEEEeCCCCEEEEE
Confidence 3445566 88999999999999 99999999999999999987621110000 01111378899999999999999999
Q ss_pred eCCCcEEEEeCC---CCceeeccc----------C--CCCcEEEEE--ecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe
Q 016257 131 GVDGHLRIMHWP---SLRIILDEP----------K--AHKSVLDMD--FSLDSEFLATTSTDGSARIWKTEDGVAWTFLT 193 (392)
Q Consensus 131 ~~dg~i~i~d~~---~~~~~~~~~----------~--~~~~i~~i~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 193 (392)
+.||.|++||++ +++...... . +...+.++. +++++.+|++++.|+.|++||+++++.+..+.
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 209 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE 209 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc
Confidence 999999999994 444332221 1 334566666 56789999999999999999999999999988
Q ss_pred cC-CCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeec-ccCCCcEEEEECC----CCCEEEEEeCCCc
Q 016257 194 RN-SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR-LLRKPASVLSISL----DGKYLAMGSKDGD 267 (392)
Q Consensus 194 ~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~----~~~~l~~~~~dg~ 267 (392)
.+ +...|.+++|+|++.. +++++.|+.|++||+++++.+..+. .+...|++++|+| ++.+|++|+.||.
T Consensus 210 ~~~h~~~v~~~~~s~~~~~-----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~ 284 (437)
T 3gre_A 210 NSPRHGAVSSICIDEECCV-----LILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF 284 (437)
T ss_dssp CCGGGCCEEEEEECTTSCE-----EEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE
T ss_pred cCCCCCceEEEEECCCCCE-----EEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc
Confidence 73 4558999999999987 8999999999999999998887775 6677899996654 6789999999999
Q ss_pred EEEEecCCceeeeeeec-------------------------cccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcc
Q 016257 268 ICVVDVKKMEINHWSKR-------------------------LHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 268 i~iwd~~~~~~~~~~~~-------------------------~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 322 (392)
|++||+++++....+.. .| ...|++++|+ ++++|++|+.||.|++|++..+..
T Consensus 285 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 285 LTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRS-LNALSTISVS-NDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCS-GGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred EEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccccc-CCceEEEEEC-CceEEEecCCCCeEEEEECCCccc
Confidence 99999999887665531 15 6679999999 889999999999999999986654
Q ss_pred c
Q 016257 323 W 323 (392)
Q Consensus 323 ~ 323 (392)
.
T Consensus 363 ~ 363 (437)
T 3gre_A 363 S 363 (437)
T ss_dssp C
T ss_pred c
Confidence 3
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=281.52 Aligned_cols=330 Identities=14% Similarity=0.080 Sum_probs=228.6
Q ss_pred CceeeeecCCC-CCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEE-----EeeCCCCCeeEEEEcC-CCC
Q 016257 4 GGTVTCGSWIK-RPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTY-----VFDESEGDPMTIAVNP-SGD 76 (392)
Q Consensus 4 ~~~v~~~~w~~-~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~sp-~~~ 76 (392)
.++|+|++|+| ++ .++++|+. ++.|++|+++.............. ...+|...|.+++|+| +++
T Consensus 43 ~~~v~~~~~s~~~~---~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 43 GGGINTLDIEPVEG---RYMLSGGS------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp SSCEEEEEECTTTC---CEEEEEET------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred CCcEEEEEEecCCC---CEEEEEcC------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 57899999999 76 34665544 677999998744322111000000 1135999999999999 778
Q ss_pred eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC---CCEEEEEeCCCcEEEEeCCCCceeecccCC
Q 016257 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (392)
Q Consensus 77 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 153 (392)
+|++++.|+.|++||+.+++....+. +...+.++.|++. +.++++++.|+.|++||+++++....+..|
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 185 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFN--------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 185 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEE--------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCC
T ss_pred EEEEEeCCCeEEEeeCCCCccceecc--------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCC
Confidence 99999999999999998876544332 4568899999884 459999999999999999999888888888
Q ss_pred CCcEEEEEecCCCCe-EEEEcCCCcEEEEECCCCe-eeEEEe--------------cCCCcceEEEEecCCCCcceEEEE
Q 016257 154 HKSVLDMDFSLDSEF-LATTSTDGSARIWKTEDGV-AWTFLT--------------RNSDEKIELCRFSKDGTKPFLFCT 217 (392)
Q Consensus 154 ~~~i~~i~~~~~~~~-l~~~~~d~~i~vwd~~~~~-~~~~~~--------------~~~~~~v~~~~~~~~~~~~~~~~~ 217 (392)
...|.+++|+|+++. +++++.||.|++||++++. ....+. ..+...|.+++|+|++.. +
T Consensus 186 ~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----l 260 (408)
T 4a11_B 186 RQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH-----L 260 (408)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE-----E
T ss_pred CCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE-----E
Confidence 889999999999984 8899999999999998765 333331 234567999999999987 7
Q ss_pred EEeCCccEEEEEeCCCceeeeeeccc-----CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceE
Q 016257 218 VQRGDKALLAVYDISTWNKIGHKRLL-----RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIA 292 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~ 292 (392)
++++.|+.|++||+++++.......+ ...+........+..+++++.|+.|++||+.+++.+..+ .+| ...|+
T Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~-~~~v~ 338 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML-KGH-YKTVD 338 (408)
T ss_dssp EEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE-CCC-SSCEE
T ss_pred EEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee-ccC-CCeEE
Confidence 89999999999999988765443322 112222222334556677788999999999999988877 578 89999
Q ss_pred EEEEeeCCCeEEEEeCCCeEEEEEeecCccccceeeeeeeeeeee-eceEEEEeeecceeeeeccc
Q 016257 293 LVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQIYSLLLALFL-ASAVVFYIFFENSDSFWNFP 357 (392)
Q Consensus 293 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~W~~~ 357 (392)
+++|+|++++|++++.||.|++|++...+................ ..........++.+++|+.+
T Consensus 339 ~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 339 CCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEECC---------------------------------------
T ss_pred EEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEeccccccccceeecccCccCceeecCCc
Confidence 999999999999999999999999997765443222111111111 12223344568899999865
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-37 Score=277.50 Aligned_cols=256 Identities=13% Similarity=0.133 Sum_probs=212.6
Q ss_pred EEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC--CCEEEEEeCC
Q 016257 56 TYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVD 133 (392)
Q Consensus 56 ~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d 133 (392)
...+.+|.+.|++++|+|++++|++|+.||.|++|++........... ..|...|.+++|+++ +++|++++.|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-----TGHEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe-----cCCCCcEEEEEeCCCCCCCEEEEeccC
Confidence 345789999999999999999999999999999999984432111111 137789999999987 9999999999
Q ss_pred CcEEEEeCCCCc--eeecccCCCCcEEEEEecCC--CCeEEEEcCCCcEEEEECCCCee--eEEEecCCCcceEEEEecC
Q 016257 134 GHLRIMHWPSLR--IILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFSK 207 (392)
Q Consensus 134 g~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~ 207 (392)
|.|++||+++++ .......|...|.+++|+|+ +++|++++.|+.|++||++.+.. ...+. .+...|.+++|+|
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAP 157 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-CCTTCEEEEEECC
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-CCCCceEEEEEcC
Confidence 999999999886 56666677789999999999 99999999999999999988743 23333 3455899999999
Q ss_pred -------------CCCcceEEEEEEeCCccEEEEEeCCCce----eeeeecccCCCcEEEEECCC---CCEEEEEeCCCc
Q 016257 208 -------------DGTKPFLFCTVQRGDKALLAVYDISTWN----KIGHKRLLRKPASVLSISLD---GKYLAMGSKDGD 267 (392)
Q Consensus 208 -------------~~~~~~~~~~~~~~~d~~i~v~d~~~~~----~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~ 267 (392)
++.. +++++.|+.|++||+++++ ....+..|...|.+++|+|+ +++|++++.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~-----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRK-----FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp CC----------CTTCE-----EEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred ccccccccccCCCCCCE-----EEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 5675 7899999999999998654 44567778999999999999 899999999999
Q ss_pred EEEEecCCce----eeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccc
Q 016257 268 ICVVDVKKME----INHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 268 i~iwd~~~~~----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
|++||+++++ ........| ...|++++|+|++++|++++.||.|++|++.....+
T Consensus 233 i~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 233 CIIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp EEEEEESSTTSCCEEEESSSSCC-SSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred EEEEeCCCCCccceeeeeccccC-CCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 9999999863 222222336 789999999999999999999999999999865443
No 81
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=265.30 Aligned_cols=283 Identities=11% Similarity=0.116 Sum_probs=227.7
Q ss_pred eeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCe
Q 016257 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (392)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~ 86 (392)
..+++|++++ ++++ +.|++|++|+.+.. .......+.+|...|++++|+|++++|++|+.|++
T Consensus 28 ~~~l~WS~~~----~lAv-------g~D~tV~iWd~~tg------~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~ 90 (318)
T 4ggc_A 28 LNLVDWSSGN----VLAV-------ALDNSVYLWSASSG------DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 90 (318)
T ss_dssp CBCEEECTTS----EEEE-------EETTEEEEEETTTC------CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSE
T ss_pred ceEEEECCCC----EEEE-------EeCCEEEEEECCCC------CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 5679999876 4553 24678999987622 12223345678899999999999999999999999
Q ss_pred EEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCce-eecccCCCCcEEEEEecCC
Q 016257 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRI-ILDEPKAHKSVLDMDFSLD 165 (392)
Q Consensus 87 i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~i~~~~~ 165 (392)
|++|++++++....+.. |...+.++ ++++..+++++.++.+++|+...... ...+..|...+..+.++++
T Consensus 91 v~iw~~~~~~~~~~~~~-------h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
T 4ggc_A 91 VQLWDVQQQKRLRNMTS-------HSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD 161 (318)
T ss_dssp EEEEETTTTEEEEEEEC-------CSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred EEEeecCCceeEEEecC-------ccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC
Confidence 99999998876555432 55556554 45677999999999999999887644 4455677779999999999
Q ss_pred CCeEEEEcCCCcEEEEECCCCeeeE---EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc
Q 016257 166 SEFLATTSTDGSARIWKTEDGVAWT---FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (392)
Q Consensus 166 ~~~l~~~~~d~~i~vwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~ 242 (392)
+++|++++.|+.|++||+++++... .....+...+.+++++|++...+ .+++++.++.|++||.+....... ..
T Consensus 162 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~i~lwd~~~~~~~~~-~~ 238 (318)
T 4ggc_A 162 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL--ATGGGTSDRHIRIWNVCSGACLSA-VD 238 (318)
T ss_dssp SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEE--EEEECTTTCEEEEEETTTCCEEEE-EE
T ss_pred CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEE--EEEecCCCCEEEEEeccccccccc-cc
Confidence 9999999999999999998765321 22233455799999999988633 256788999999999998776544 44
Q ss_pred cCCCcEEEEECCCCCEEEEEe--CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecC
Q 016257 243 LRKPASVLSISLDGKYLAMGS--KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 320 (392)
+...+..+.|+|++..+++++ .|+.|++||+++++.+..+ .+| .+.|++++|+|+|++|++|+.||+|+||++...
T Consensus 239 ~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l-~gH-~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 239 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KGH-TSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CCC-SSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEE-cCC-CCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 567899999999999887755 7999999999999998877 689 999999999999999999999999999998643
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.8e-38 Score=288.65 Aligned_cols=293 Identities=12% Similarity=0.077 Sum_probs=213.9
Q ss_pred EEeeCCCCCeeEEEEcC-CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC-CCCEEEEEeCCC
Q 016257 57 YVFDESEGDPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDG 134 (392)
Q Consensus 57 ~~~~~h~~~v~~~~~sp-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg 134 (392)
....+|...|++++|+| ++++||+|+.||.|+|||+.+.+..... ....|.+.|++++|+| ++++|++++.||
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~-----~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI-----KGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE-----CCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE-----EccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 35667899999999999 5679999999999999999876543222 1234889999999998 789999999999
Q ss_pred cEEEEeCCCCceeecccCC--CCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcc
Q 016257 135 HLRIMHWPSLRIILDEPKA--HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 135 ~i~i~d~~~~~~~~~~~~~--~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
+|++||++++........+ ...+.+++|+|++++|++|+.||.|++||++. +.+..+..| ...|.+++|+|++..+
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h-~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMH-KKKVTHVALNPCCDWF 265 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCC-SSCEEEEEECTTCSSE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecc-cceEEeeeecCCCceE
Confidence 9999999876543222222 23578999999999999999999999999964 555566554 4589999999998752
Q ss_pred eEEEEEEeCCccEEEEEeCCCceeeee---ecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecccc--
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNKIGH---KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHL-- 287 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-- 287 (392)
+++++.|+.|++||+++.+.... ...|...|++++|+|+|++|++++.||.|++||+.+++....+. .|.
T Consensus 266 ----~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~-~~~~~ 340 (435)
T 4e54_B 266 ----LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLI-PHPHR 340 (435)
T ss_dssp ----EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEEC-CCCCC
T ss_pred ----EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEe-ccccc
Confidence 67889999999999988664433 35688899999999999999999999999999999887655442 220
Q ss_pred ---CcceEEEEEeeCCCeEEEEe------------CCCeEEEEEeecCccccceee--eeeee--eeeeeceEEEEeeec
Q 016257 288 ---GTSIALVEFCPTQRVVLTAS------------KEWGAMITKLTVPADWKEWQI--YSLLL--ALFLASAVVFYIFFE 348 (392)
Q Consensus 288 ---~~~i~~~~~s~~~~~l~~~~------------~dg~i~iw~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~d 348 (392)
...+....|+|++..+++++ .++.|++|+...+........ ...+. ..+...+.+++++.|
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d 420 (435)
T 4e54_B 341 HFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMG 420 (435)
T ss_dssp CCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECS
T ss_pred ccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcC
Confidence 11234556777777776664 235799999876543221100 00000 011222333445568
Q ss_pred ceeeeeccccccc
Q 016257 349 NSDSFWNFPVARN 361 (392)
Q Consensus 349 ~~i~~W~~~~~~~ 361 (392)
+.|++|++..++.
T Consensus 421 ~~i~iW~~~~gk~ 433 (435)
T 4e54_B 421 YHILIWSQQEART 433 (435)
T ss_dssp SEEEECCCC----
T ss_pred CcEEEEECCcCee
Confidence 9999999988764
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-36 Score=278.95 Aligned_cols=277 Identities=14% Similarity=0.208 Sum_probs=232.6
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCC
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~ 85 (392)
.+.|++++++ ++++|+. ++.|++|++. .......+.+|.+.|.+++|+|++ .|++|+.||
T Consensus 124 v~~~~~~~~~-----~l~sgs~------dg~i~vwd~~--------~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg 183 (464)
T 3v7d_B 124 VITCLQFEDN-----YVITGAD------DKMIRVYDSI--------NKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDR 183 (464)
T ss_dssp CEEEEEEETT-----EEEEEET------TSCEEEEETT--------TTEEEEEECCCSSCEEEEEECSTT-EEEEEETTS
T ss_pred cEEEEEECCC-----EEEEEcC------CCcEEEEECC--------CCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCC
Confidence 3577777542 4555544 6779999876 445667788999999999999988 999999999
Q ss_pred eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEec--CCCCEEEEEeCCCcEEEEeCCCCce-----------------
Q 016257 86 GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFS--VDGSRFAAGGVDGHLRIMHWPSLRI----------------- 146 (392)
Q Consensus 86 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~i~d~~~~~~----------------- 146 (392)
+|++||+.+++....+. .|...|.+++|+ +++++|++++.|+.|++||+++++.
T Consensus 184 ~i~vwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 256 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFE-------GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP 256 (464)
T ss_dssp CEEEEETTTTEEEEEEC-------CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCG
T ss_pred CEEEEECCCCcEEEEEC-------CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeecc
Confidence 99999998877554432 377899999998 5778999999999999999987653
Q ss_pred ------eecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEe
Q 016257 147 ------ILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR 220 (392)
Q Consensus 147 ------~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 220 (392)
......|...+.++ +++++++++++.|+.|++||+++++.+..+..+. ..+.+++|+|++.. ++++
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~-----l~sg 328 (464)
T 3v7d_B 257 EENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKR-----CISA 328 (464)
T ss_dssp GGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTE-----EEEE
T ss_pred CCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCEEEEEEcCCCCE-----EEEE
Confidence 22344555677766 6778999999999999999999999998887654 47999999999997 7999
Q ss_pred CCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCC
Q 016257 221 GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQ 300 (392)
Q Consensus 221 ~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 300 (392)
+.|+.|++||+++++.+..+..|...+.+++|+ +++|++++.||.|++||+.+++..... .+ ...+..++|++++
T Consensus 329 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~--~~-~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 329 SMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY--HH-TNLSAITTFYVSD 403 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE--EC-TTCCCEEEEEECS
T ss_pred eCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee--cC-CCCccEEEEEeCC
Confidence 999999999999999999999999999999997 579999999999999999988766554 24 6678889999999
Q ss_pred CeEEEEeCCCeEEEEEeecCccc
Q 016257 301 RVVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 301 ~~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
++|++++ ||.|++|++..++..
T Consensus 404 ~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 404 NILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp SEEEEEE-TTEEEEEETTTCCEE
T ss_pred CEEEEec-CCeEEEEECCCCcEE
Confidence 9999998 899999999876543
No 84
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.7e-37 Score=280.08 Aligned_cols=287 Identities=12% Similarity=0.114 Sum_probs=232.7
Q ss_pred eEEEeeCCCCCe-eEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC
Q 016257 55 VTYVFDESEGDP-MTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD 133 (392)
Q Consensus 55 ~~~~~~~h~~~v-~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 133 (392)
....+.+|.+.+ .++.+ ++++|++|+.||.|++||+.+++....+. .|.+.|.+++|+|++ +|++|+.|
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~-------~h~~~V~~l~~~~~~-~l~s~s~d 182 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLS-------GHDGGVWALKYAHGG-ILVSGSTD 182 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECSTT-EEEEEETT
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEe-------CCCcCEEEEEEcCCC-EEEEEeCC
Confidence 456788998885 56665 56799999999999999998887554443 378899999999988 99999999
Q ss_pred CcEEEEeCCCCceeecccCCCCcEEEEEec--CCCCeEEEEcCCCcEEEEECCCCeee----------------------
Q 016257 134 GHLRIMHWPSLRIILDEPKAHKSVLDMDFS--LDSEFLATTSTDGSARIWKTEDGVAW---------------------- 189 (392)
Q Consensus 134 g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~---------------------- 189 (392)
|+|++||+++++....+..|...|.+++|+ ++++++++++.|+.|++||++++...
T Consensus 183 g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 183 RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 999999999999888888888899999998 57789999999999999999876533
Q ss_pred -EEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcE
Q 016257 190 -TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDI 268 (392)
Q Consensus 190 -~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 268 (392)
..+.. +...+.++ ++++.. +++++.|+.|++||+++++.+..+..|...+.+++|+|+++++++|+.||.|
T Consensus 263 ~~~~~~-~~~~v~~~--~~~~~~-----l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i 334 (464)
T 3v7d_B 263 VGVLRG-HMASVRTV--SGHGNI-----VVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTI 334 (464)
T ss_dssp EEEECC-CSSCEEEE--EEETTE-----EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred EEEccC-ccceEEEE--cCCCCE-----EEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 22332 33355555 667776 7899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceeee--eeeeeeeeeceEEEEee
Q 016257 269 CVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQIY--SLLLALFLASAVVFYIF 346 (392)
Q Consensus 269 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 346 (392)
++||+++++.+..+ .+| ...|.+++|+ +++|++++.||.|++|++............ ............++++
T Consensus 335 ~vwd~~~~~~~~~~-~~h-~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 409 (464)
T 3v7d_B 335 RIWDLENGELMYTL-QGH-TALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG- 409 (464)
T ss_dssp EEEETTTTEEEEEE-CCC-SSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEE-
T ss_pred EEEECCCCcEEEEE-eCC-CCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEe-
Confidence 99999999988877 578 8999999997 579999999999999999865432221111 1111222233344444
Q ss_pred ecceeeeecccccccccC
Q 016257 347 FENSDSFWNFPVARNQHG 364 (392)
Q Consensus 347 ~d~~i~~W~~~~~~~~~~ 364 (392)
.|+.|++||+.+++.+..
T Consensus 410 ~dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 410 SENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp ETTEEEEEETTTCCEEES
T ss_pred cCCeEEEEECCCCcEEeh
Confidence 499999999999887653
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.8e-37 Score=275.79 Aligned_cols=296 Identities=13% Similarity=0.097 Sum_probs=231.1
Q ss_pred CCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe
Q 016257 52 SPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG 131 (392)
Q Consensus 52 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 131 (392)
.+.......+|...+....+++++..+++++.|+.|++|++.+++....... .|...|.+++|+|++++|++|+
T Consensus 80 ~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~------~~~~~v~~v~~s~~~~~l~~~~ 153 (401)
T 4aez_A 80 TPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAET------DESTYVASVKWSHDGSFLSVGL 153 (401)
T ss_dssp SCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEEC------CTTCCEEEEEECTTSSEEEEEE
T ss_pred CcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeec------CCCCCEEEEEECCCCCEEEEEC
Confidence 3444445557776644433333445688889999999999988775443322 2678999999999999999999
Q ss_pred CCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCC-CeeeEEEecCCCcceEEEEecCCCC
Q 016257 132 VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTED-GVAWTFLTRNSDEKIELCRFSKDGT 210 (392)
Q Consensus 132 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~ 210 (392)
.||.|++||+++++.+..+..|...|.+++|+ +++|++++.|+.|++||++. ......+..+ ...|.+++|+|++.
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 230 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGH-SSEVCGLAWRSDGL 230 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECC-SSCEEEEEECTTSS
T ss_pred CCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCC-CCCeeEEEEcCCCC
Confidence 99999999999999988888888899999995 67999999999999999984 5556666554 55899999999998
Q ss_pred cceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCC-CEEEEEe--CCCcEEEEecCCceeeeeeecccc
Q 016257 211 KPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDG-KYLAMGS--KDGDICVVDVKKMEINHWSKRLHL 287 (392)
Q Consensus 211 ~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~ 287 (392)
. +++++.|+.|++||+++++.+..+..|...|.+++|+|++ .++++++ .|+.|++||+.+++....+. +
T Consensus 231 ~-----l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~- 302 (401)
T 4aez_A 231 Q-----LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--A- 302 (401)
T ss_dssp E-----EEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--C-
T ss_pred E-----EEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--C-
Confidence 7 7999999999999999999888888899999999999976 5666654 79999999999998887763 4
Q ss_pred CcceEEEEEeeCCCeEEEEe--CCCeEEEEEeecCccccceeeee---eee--eeeeeceEEEEeeecceeeeecccccc
Q 016257 288 GTSIALVEFCPTQRVVLTAS--KEWGAMITKLTVPADWKEWQIYS---LLL--ALFLASAVVFYIFFENSDSFWNFPVAR 360 (392)
Q Consensus 288 ~~~i~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~d~~i~~W~~~~~~ 360 (392)
...|.+++|+|++++|++++ .||.|++|++............. .+. ........+++++.|+.|++|++..++
T Consensus 303 ~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 303 GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 67899999999999999954 89999999998754332221110 111 111234567888899999999999887
Q ss_pred cccC
Q 016257 361 NQHG 364 (392)
Q Consensus 361 ~~~~ 364 (392)
.+..
T Consensus 383 ~~~~ 386 (401)
T 4aez_A 383 HVKR 386 (401)
T ss_dssp ----
T ss_pred cccc
Confidence 6643
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3e-37 Score=277.81 Aligned_cols=292 Identities=11% Similarity=0.101 Sum_probs=226.3
Q ss_pred eecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC-CCCeEEEEeCCCeE
Q 016257 9 CGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVCSTTNGGC 87 (392)
Q Consensus 9 ~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~~d~~i 87 (392)
.++++|+. ..+++.|+. ++.|.+|.++..+.. ......+.+|.+.|++++|+| ++++|++|+.||.|
T Consensus 39 ~~~~~~~~--~~~~~~~~~------~g~i~v~~~~~~~~~----~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v 106 (402)
T 2aq5_A 39 FCAVNPKF--MALICEASG------GGAFLVLPLGKTGRV----DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTV 106 (402)
T ss_dssp SEEECSSE--EEEEBCCSS------SCCEEEEETTCCEEC----CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred cEEECCCe--EEEEEEEcC------CCEEEEEECccCCCC----CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeE
Confidence 34555543 234443433 667999998643221 112234788999999999999 99999999999999
Q ss_pred EEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCC-CEEEEEeCCCcEEEEeCCCCceeecc--cCCCCcEEEEEecC
Q 016257 88 KLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDG-SRFAAGGVDGHLRIMHWPSLRIILDE--PKAHKSVLDMDFSL 164 (392)
Q Consensus 88 ~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~i~~~~ 164 (392)
++|++.++...............|...|.+++|+|++ ++|++++.|+.|++||+++++....+ ..|...|.+++|+|
T Consensus 107 ~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 107 MVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR 186 (402)
T ss_dssp EEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT
T ss_pred EEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC
Confidence 9999988743211110011112378899999999998 69999999999999999999988777 67778999999999
Q ss_pred CCCeEEEEcCCCcEEEEECCCCeeeEEE-ecCCCcceEEEEecCCCCcceEEEEEEe---CCccEEEEEeCCCcee-eee
Q 016257 165 DSEFLATTSTDGSARIWKTEDGVAWTFL-TRNSDEKIELCRFSKDGTKPFLFCTVQR---GDKALLAVYDISTWNK-IGH 239 (392)
Q Consensus 165 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~d~~i~v~d~~~~~~-~~~ 239 (392)
++++|++++.|+.|++||+++++.+..+ ..+....+.+++|+|++.. ++++ +.++.|++||+++.+. +..
T Consensus 187 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~g~~~~~d~~i~iwd~~~~~~~~~~ 261 (402)
T 2aq5_A 187 DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKI-----LTTGFSRMSERQVALWDTKHLEEPLSL 261 (402)
T ss_dssp TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEE-----EEEEECTTCCEEEEEEETTBCSSCSEE
T ss_pred CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcE-----EEEeccCCCCceEEEEcCccccCCceE
Confidence 9999999999999999999999998888 4555445899999999885 5666 7899999999998664 222
Q ss_pred e-cccCCCcEEEEECCCCCEEEE-EeCCCcEEEEecCCcee-eeeee-ccccCcceEEEEEeeCCCeEEEEeCCCeEEEE
Q 016257 240 K-RLLRKPASVLSISLDGKYLAM-GSKDGDICVVDVKKMEI-NHWSK-RLHLGTSIALVEFCPTQRVVLTASKEWGAMIT 315 (392)
Q Consensus 240 ~-~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~iwd~~~~~~-~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 315 (392)
. ..+...+.+++|+|++++|++ |+.||.|++||+.+++. ...+. ..| ...|.+++|+|++.++++ .++.+++|
T Consensus 262 ~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~-~~~v~~~~~sp~~~~~~s--~~~~~~~~ 338 (402)
T 2aq5_A 262 QELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSS-KESQRGMGYMPKRGLEVN--KCEIARFY 338 (402)
T ss_dssp EECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECC-SSCCSEEEECCGGGSCGG--GTEEEEEE
T ss_pred EeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccccc-CCcccceEEeccccccee--cceeEEEE
Confidence 2 245678999999999999875 55799999999998873 22221 224 689999999999998775 56699999
Q ss_pred EeecC
Q 016257 316 KLTVP 320 (392)
Q Consensus 316 ~~~~~ 320 (392)
++...
T Consensus 339 ~l~~~ 343 (402)
T 2aq5_A 339 KLHER 343 (402)
T ss_dssp EEETT
T ss_pred EcCCC
Confidence 99854
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.3e-37 Score=270.61 Aligned_cols=282 Identities=11% Similarity=0.036 Sum_probs=229.2
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCC-eEEEEe
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGD-DFVCST 82 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~~ 82 (392)
.++|++++|+|++. ++++|+. ++.|++|.++.... ......+.+|...|.+++|+|+++ +|++++
T Consensus 11 ~~~v~~~~~s~~~~---~l~~~~~------d~~v~iw~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 11 KDYISDIKIIPSKS---LLLITSW------DGSLTVYKFDIQAK-----NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SSCEEEEEEEGGGT---EEEEEET------TSEEEEEEEETTTT-----EEEEEEEEECSSCEEEEEEEESSSEEEEEEE
T ss_pred CCcEEEEEEcCCCC---EEEEEcC------CCeEEEEEeCCCCc-----cccceeeeecCCceEEEEECCCCCcEEEEEc
Confidence 56899999999874 4554443 67799999975431 112334558999999999999999 999999
Q ss_pred CCCeEEEEEE-eCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC---------CceeecccC
Q 016257 83 TNGGCKLFEV-YGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS---------LRIILDEPK 152 (392)
Q Consensus 83 ~d~~i~iw~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~ 152 (392)
.||.|++||+ .+++. ..+.. ..|...|.+++|+| +++|++++.|+.|++||+++ ++.+..+.
T Consensus 77 ~dg~i~~wd~~~~~~~-~~~~~-----~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~- 148 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSF-QALTN-----NEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK- 148 (342)
T ss_dssp TTSCEEEECSSSSSSE-EECBS-----CCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-
T ss_pred CCCeEEEEEeccCCce-Eeccc-----cCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-
Confidence 9999999999 77653 11111 02778999999999 99999999999999999987 66555444
Q ss_pred CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCC-Cee-eEEEecCCCcceEEEEecC-CCCcceEEEEEEeCCccEEEEE
Q 016257 153 AHKSVLDMDFSLDSEFLATTSTDGSARIWKTED-GVA-WTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGDKALLAVY 229 (392)
Q Consensus 153 ~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~-~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~d~~i~v~ 229 (392)
+...|.+++|+|++ +++++.|+.|++||+++ +.. .......+...+.+++|+| ++.. +++++.++.|++|
T Consensus 149 ~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~-----l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG-----YACSSIDGRVAVE 221 (342)
T ss_dssp SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE-----EEEEETTSEEEEE
T ss_pred eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCE-----EEEEecCCcEEEE
Confidence 67799999999987 99999999999999987 543 3334445566899999999 9886 7889999999999
Q ss_pred eCCCc------eeeeeecccCC---------CcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEE
Q 016257 230 DISTW------NKIGHKRLLRK---------PASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALV 294 (392)
Q Consensus 230 d~~~~------~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 294 (392)
|++.. +....+..|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+...| ...|.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~ 300 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKI 300 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SSEEEEE
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhccc-CCCceEe
Confidence 99876 66666666654 99999999999999999999999999999999888775444 7789999
Q ss_pred EEeeCCCeEEEEeCCCe-EEEEEe
Q 016257 295 EFCPTQRVVLTASKEWG-AMITKL 317 (392)
Q Consensus 295 ~~s~~~~~l~~~~~dg~-i~iw~~ 317 (392)
+ |++++|++++.||. .+.+..
T Consensus 301 ~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 301 A--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp E--ECSSEEEEEEECTHHHHCSSS
T ss_pred c--CCCCeEEEEecCCcccccccc
Confidence 9 99999999999998 555543
No 88
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.3e-37 Score=300.13 Aligned_cols=286 Identities=12% Similarity=0.104 Sum_probs=239.8
Q ss_pred eEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCC
Q 016257 55 VTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG 134 (392)
Q Consensus 55 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 134 (392)
....+.+|.+.|.+++|+|++++|++++.||.|++||+.+++....+. .|..+|.+++|+|++++|++++.||
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ-------VTETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-------CCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe-------cCCCcEEEEEEeCCCCEEEEEeCCC
Confidence 346788999999999999999999999999999999998876554443 2678999999999999999999999
Q ss_pred cEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCC-eeeEEEecCCCcceEEEEecC-CCCcc
Q 016257 135 HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-VAWTFLTRNSDEKIELCRFSK-DGTKP 212 (392)
Q Consensus 135 ~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~ 212 (392)
.|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|++||++++ .....+.. +...+.+++|+| ++..
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~- 155 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-HEHFVMCVAFNPKDPST- 155 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-CSSCEEEEEEETTEEEE-
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-CCCcEEEEEEEcCCCCE-
Confidence 9999999999998888888889999999999999999999999999999887 45555554 455899999999 6665
Q ss_pred eEEEEEEeCCccEEEEEeCCCceeeeeecccC-CCcEEEEECC--CCCEEEEEeCCCcEEEEecCCceeeeeeeccccCc
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-KPASVLSISL--DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGT 289 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 289 (392)
+++++.|+.|++||+++++....+..+. ..+.+++|+| ++.+|++++.||.|++||+.+++....+ ..| ..
T Consensus 156 ----l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~-~~ 229 (814)
T 3mkq_A 156 ----FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL-EGH-MS 229 (814)
T ss_dssp ----EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEE-ECC-SS
T ss_pred ----EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE-cCC-CC
Confidence 7889999999999999887766665544 8899999999 9999999999999999999999887776 567 88
Q ss_pred ceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccce--------eeeeeeeeeeeeceEEEEeeecceeeeeccccc
Q 016257 290 SIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEW--------QIYSLLLALFLASAVVFYIFFENSDSFWNFPVA 359 (392)
Q Consensus 290 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~ 359 (392)
.|.+++|+|++++|++++.||.|++|++......... .+.+.+.+ ....++.+.++.+.+|++..+
T Consensus 230 ~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 230 NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG----RKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTC----GGGEEEEEETTEEEEEECSCC
T ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCC----CceEEEEEeCCCEEEEEcCCC
Confidence 9999999999999999999999999998765432221 11111111 112456667888999987654
No 89
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.9e-36 Score=274.85 Aligned_cols=300 Identities=14% Similarity=0.136 Sum_probs=234.3
Q ss_pred CceeeeecCCCCCcc-------eeEEEeCCCCCCCCCcCceeEEEEcCC--------------CCcc----ccC-CceEE
Q 016257 4 GGTVTCGSWIKRPEN-------VNLVVLGKSSRASSSPSVLEIFSFDPK--------------TTSV----YTS-PLVTY 57 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~-------~~~~~~g~~~~~~~~~~~i~i~~~~~~--------------~~~~----~~~-~~~~~ 57 (392)
.-|..|+.|.|+... ...+++|... .+..+.|.++.++.. .... ... .....
T Consensus 45 ~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t--~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 122 (430)
T 2xyi_A 45 EWPSLTAQWLPDVTKQDGKDYSVHRLILGTHT--SDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIE 122 (430)
T ss_dssp SSCCSCEEECSCCEECTTCSCEEEEEEEECCC--SSSCEEEEEEEEEEC--------------------------CEEEE
T ss_pred CCCceEEEECcccccccCCCcceEEEEEEEcC--CCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEE
Confidence 568899999997631 1345666653 236788888876511 0000 111 22335
Q ss_pred EeeCCCCCeeEEEEcCC-CCeEEEEeCCCeEEEEEEeCC----------ccceeeccccCCCCCCCCCeEEEEecCCCC-
Q 016257 58 VFDESEGDPMTIAVNPS-GDDFVCSTTNGGCKLFEVYGG----------ATDINLLAKKMPPLQDAGPQKCLSFSVDGS- 125 (392)
Q Consensus 58 ~~~~h~~~v~~~~~sp~-~~~l~~~~~d~~i~iw~~~~~----------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~- 125 (392)
....|.+.|++++|+|+ +.+|++++.+|.|++|++... .....+ ..|...+.+++|+|++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL-------RGHQKEGYGLSWNPNLNG 195 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE-------ECCSSCCCCEEECTTSTT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe-------cCCCCCeEEEEeCCCCCC
Confidence 56789999999999997 679999999999999999762 211111 13778999999999988
Q ss_pred EEEEEeCCCcEEEEeCCCCce-------eecccCCCCcEEEEEecC-CCCeEEEEcCCCcEEEEECCCC---eeeEEEec
Q 016257 126 RFAAGGVDGHLRIMHWPSLRI-------ILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDG---VAWTFLTR 194 (392)
Q Consensus 126 ~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~ 194 (392)
+|++|+.||.|++|++.++.. ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ +....+..
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 999999999999999987432 233456777899999999 6788999999999999999987 46666654
Q ss_pred CCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC-ceeeeeecccCCCcEEEEECCCCC-EEEEEeCCCcEEEEe
Q 016257 195 NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST-WNKIGHKRLLRKPASVLSISLDGK-YLAMGSKDGDICVVD 272 (392)
Q Consensus 195 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd 272 (392)
+ ...|.+++|+|++..+ +++++.|+.|++||+++ ..++..+..|...|++++|+|+++ +|++++.|+.|++||
T Consensus 276 ~-~~~v~~i~~~p~~~~~----l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 276 H-TAEVNCLSFNPYSEFI----LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp C-SSCEEEEEECSSCTTE----EEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred C-CCCeEEEEeCCCCCCE----EEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 4 4579999999998852 67899999999999998 456777888999999999999984 799999999999999
Q ss_pred cCCc--------------eeeeeeeccccCcceEEEEEeeCCC-eEEEEeCCCeEEEEEeec
Q 016257 273 VKKM--------------EINHWSKRLHLGTSIALVEFCPTQR-VVLTASKEWGAMITKLTV 319 (392)
Q Consensus 273 ~~~~--------------~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~ 319 (392)
+... +.+.. ..+| ...|++++|+|+++ +|++++.||.|++|++..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~-~~~h-~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFI-HGGH-TAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEE-CCCC-SSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCccccCccccccCCcceEEE-cCCC-CCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 9872 33333 2567 88999999999999 899999999999999974
No 90
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.7e-35 Score=269.94 Aligned_cols=303 Identities=16% Similarity=0.208 Sum_probs=247.1
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCC
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~ 85 (392)
.+.|++++ + .++++|+. ++.|++|+++ .......+.+|.+.|.+++|+ ++.|++|+.||
T Consensus 121 v~~~~~~~--g---~~l~sg~~------dg~i~vwd~~--------~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg 179 (445)
T 2ovr_B 121 VITCLQFC--G---NRIVSGSD------DNTLKVWSAV--------TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDR 179 (445)
T ss_dssp CEEEEEEE--T---TEEEEEET------TSCEEEEETT--------TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTS
T ss_pred cEEEEEEc--C---CEEEEEEC------CCcEEEEECC--------CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCC
Confidence 35666664 3 24555544 6779999886 344566788999999999997 56999999999
Q ss_pred eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCC
Q 016257 86 GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLD 165 (392)
Q Consensus 86 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~ 165 (392)
.|++||+.+++....+. .|...|.++.|+ ++.+++|+.||.|++||+++++....+..|...|.+++| +
T Consensus 180 ~i~vwd~~~~~~~~~~~-------~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~ 248 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLY-------GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--D 248 (445)
T ss_dssp CEEEEETTTTEEEEEEC-------CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--C
T ss_pred eEEEEECCcCcEEEEEC-------CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--C
Confidence 99999998887554443 367899999995 568999999999999999999998888888889999999 6
Q ss_pred CCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCC
Q 016257 166 SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRK 245 (392)
Q Consensus 166 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 245 (392)
++++++++.|+.|++||+++++.+..+..+. ..+.+++| ++.. +++++.|+.|++||+++++.+..+..|..
T Consensus 249 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~-----l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 320 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPETETCLHTLQGHT-NRVYSLQF--DGIH-----VVSGSLDTSIRVWDVETGNCIHTLTGHQS 320 (445)
T ss_dssp SSCEEEEETTSCEEEEEGGGTEEEEEECCCS-SCEEEEEE--CSSE-----EEEEETTSCEEEEETTTCCEEEEECCCCS
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEecCCC-CceEEEEE--CCCE-----EEEEeCCCeEEEEECCCCCEEEEEcCCcc
Confidence 8899999999999999999999988887654 47999999 5665 78999999999999999999999999988
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec--cccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccc
Q 016257 246 PASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR--LHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 246 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
.+.++.+ +++++++|+.||.|++||+++++....+.. .| ...|++++|+ +++|++|+.||.|++|++..+...
T Consensus 321 ~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 321 LTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp CEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred cEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCC-CCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCcee
Confidence 9988877 467999999999999999999988776642 36 7899999995 679999999999999999866543
Q ss_pred cce-------------eeeeeeeeeeeeceEEEEeeecce----eeeecccc
Q 016257 324 KEW-------------QIYSLLLALFLASAVVFYIFFENS----DSFWNFPV 358 (392)
Q Consensus 324 ~~~-------------~~~~~~~~~~~~~~~~~~~~~d~~----i~~W~~~~ 358 (392)
... .+.+.+ ....+++++.|+. +.+||+..
T Consensus 396 ~~~~~~~~~~~~~~v~~~~~s~-----~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 396 RNLVTLESGGSGGVVWRIRASN-----TKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEECTTGGGTCEEEEEEECS-----SEEEEEEECSSSSSCCEEEEEECCC
T ss_pred eeeeccccCCCCceEEEEEecC-----CEEEEEEcccCCCCccEEEEEECCC
Confidence 222 222222 2335566777887 99999874
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.3e-36 Score=260.57 Aligned_cols=246 Identities=12% Similarity=0.107 Sum_probs=196.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC--CCCeEEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP--SGDDFVCS 81 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~~~~l~~~ 81 (392)
..+|++++|+|+++ ++++|+. |+.|++|+++... ......+.+|.+.|++++|+| ++++|++|
T Consensus 9 ~~~V~~~~~s~~g~---~las~s~------D~~v~iw~~~~~~------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~ 73 (297)
T 2pm7_B 9 NEMIHDAVMDYYGK---RMATCSS------DKTIKIFEVEGET------HKLIDTLTGHEGPVWRVDWAHPKFGTILASC 73 (297)
T ss_dssp SSCEEEEEECTTSS---EEEEEET------TSCEEEEEBCSSC------BCCCEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred cCceEEEEECCCCC---EEEEEeC------CCEEEEEecCCCC------cEEEEEEccccCCeEEEEecCCCcCCEEEEE
Confidence 46899999999984 4665554 7779999986432 223457899999999999986 38899999
Q ss_pred eCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC--CCEEEEEeCCCcEEEEeCCCCce--eecccCCCCcE
Q 016257 82 TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRI--ILDEPKAHKSV 157 (392)
Q Consensus 82 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~i 157 (392)
+.|++|++||+.+++...... ...|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+..|...|
T Consensus 74 s~D~~v~iWd~~~~~~~~~~~-----~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v 148 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 148 (297)
T ss_dssp ETTTEEEEEEBSSSCBCCCEE-----ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCE
T ss_pred cCCCEEEEEEcCCCceEEEEE-----eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCcc
Confidence 999999999998764211111 1136789999999997 88999999999999999987632 23455677799
Q ss_pred EEEEecCC-------------CCeEEEEcCCCcEEEEECCCCe----eeEEEecCCCcceEEEEecCCC---CcceEEEE
Q 016257 158 LDMDFSLD-------------SEFLATTSTDGSARIWKTEDGV----AWTFLTRNSDEKIELCRFSKDG---TKPFLFCT 217 (392)
Q Consensus 158 ~~i~~~~~-------------~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~ 217 (392)
.+++|+|+ +++|++++.|++|++||+++++ ....+..| ...|.+++|+|++ .. +
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H-~~~V~~v~~sp~~~~~~~-----l 222 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSY-----M 222 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEE-----E
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC-CCceEEEEECCCCCCceE-----E
Confidence 99999997 5789999999999999998765 44555544 5589999999996 33 7
Q ss_pred EEeCCccEEEEEeCCCce---eeeee--cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 016257 218 VQRGDKALLAVYDISTWN---KIGHK--RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~---~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 275 (392)
++++.|+.|++||++... ....+ ..+...+.+++|+|+|++|++++.|+.|++|+...
T Consensus 223 as~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 223 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 899999999999998642 11122 45678899999999999999999999999999763
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1e-35 Score=270.61 Aligned_cols=282 Identities=14% Similarity=0.204 Sum_probs=223.0
Q ss_pred eCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEE
Q 016257 60 DESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (392)
Q Consensus 60 ~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 139 (392)
.+|...|.++.+ ++++|++|+.||.|++||+.+++....+. .|...|.+++| ++++|++|+.||.|++|
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~--~~~~l~sg~~dg~i~vw 198 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILT-------GHTGSVLCLQY--DERVIITGSSDSTVRVW 198 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEEC-------CCSSCEEEEEC--CSSEEEEEETTSCEEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEc-------CCCCcEEEEEE--CCCEEEEEcCCCeEEEE
Confidence 456678998887 78899999999999999998877554443 37789999999 78899999999999999
Q ss_pred eCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeE--EEecCCCcceEEEEecCCCCcceEEEE
Q 016257 140 HWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT--FLTRNSDEKIELCRFSKDGTKPFLFCT 217 (392)
Q Consensus 140 d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~ 217 (392)
|+++++....+..|...|.+++|++ ..+++++.||.|++||+++++... .....+...|.+++| ++.. +
T Consensus 199 d~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~-----l 269 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKY-----I 269 (435)
T ss_dssp ESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTE-----E
T ss_pred ECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCE-----E
Confidence 9999999888888888999999974 599999999999999999876552 223344568999999 5555 7
Q ss_pred EEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEe
Q 016257 218 VQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFC 297 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 297 (392)
++++.|+.|++||+++++.+..+..|...+.++++ +++++++|+.||.|++||+++++....+ .+| ...|.+++|
T Consensus 270 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~h-~~~v~~~~~- 344 (435)
T 1p22_A 270 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL-EGH-EELVRCIRF- 344 (435)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEE-CCC-SSCEEEEEC-
T ss_pred EEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEE-eCC-cCcEEEEEe-
Confidence 89999999999999999999999999999999998 4789999999999999999999888776 578 889999999
Q ss_pred eCCCeEEEEeCCCeEEEEEeecCcccc-------ceee---eeeeeeeeeeceEEEEeeecceeeeecccccccccCCCC
Q 016257 298 PTQRVVLTASKEWGAMITKLTVPADWK-------EWQI---YSLLLALFLASAVVFYIFFENSDSFWNFPVARNQHGGPK 367 (392)
Q Consensus 298 ~~~~~l~~~~~dg~i~iw~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p~ 367 (392)
++.+|++|+.||.|++|++....... .... ...+.........+++++.|+.|++||+..+...+..+.
T Consensus 345 -~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 423 (435)
T 1p22_A 345 -DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAEPP 423 (435)
T ss_dssp -CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC------------
T ss_pred -cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCCcccCCC
Confidence 78899999999999999997544211 0000 011122223556788888999999999988765544443
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=269.99 Aligned_cols=247 Identities=10% Similarity=0.029 Sum_probs=202.0
Q ss_pred CCCCCeeEEEEcCCCCeE-EEEeCCCeEEEEEEe--CCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEE
Q 016257 61 ESEGDPMTIAVNPSGDDF-VCSTTNGGCKLFEVY--GGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137 (392)
Q Consensus 61 ~h~~~v~~~~~sp~~~~l-~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 137 (392)
+|.+.|.+++|+|++++| ++++.|+.|++||+. +++....+... .+...|.+++|+|++++|++++.+|.++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF-----CFSKRPNAISIAEDDTTVIIADKFGDVY 174 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE-----ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc-----cCCCCceEEEEcCCCCEEEEEeCCCcEE
Confidence 566789999999999996 889999999999998 66554443321 2567899999999999999999999999
Q ss_pred EEeCCCCceee----cccCCCCcEEEEEecCC---CCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCC
Q 016257 138 IMHWPSLRIIL----DEPKAHKSVLDMDFSLD---SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGT 210 (392)
Q Consensus 138 i~d~~~~~~~~----~~~~~~~~i~~i~~~~~---~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 210 (392)
+|++.+++... .+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+...+...|.+++|+ ++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~ 253 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY 253 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT
T ss_pred EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC
Confidence 99998776543 55667789999999999 99999999999999999999988887665566689999999 888
Q ss_pred cceEEEEEEeCCccEEEEEeCCCceeeeeecc-------------------------cCCCcEEEEECCCCCEEEEEe-C
Q 016257 211 KPFLFCTVQRGDKALLAVYDISTWNKIGHKRL-------------------------LRKPASVLSISLDGKYLAMGS-K 264 (392)
Q Consensus 211 ~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~-------------------------~~~~v~~~~~s~~~~~l~~~~-~ 264 (392)
. +++++.|+.|++||+++++.+..+.. ....+.+++|+|++++|++++ .
T Consensus 254 ~-----l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~ 328 (450)
T 2vdu_B 254 L-----LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA 328 (450)
T ss_dssp E-----EEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT
T ss_pred E-----EEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC
Confidence 7 78999999999999999887766642 235789999999999999999 8
Q ss_pred CCcEEEEec--CCc---eeeeeeeccccCcceEEEEEeeCCCeEEEEeC------CCeEEEEEeecCc
Q 016257 265 DGDICVVDV--KKM---EINHWSKRLHLGTSIALVEFCPTQRVVLTASK------EWGAMITKLTVPA 321 (392)
Q Consensus 265 dg~i~iwd~--~~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~i~iw~~~~~~ 321 (392)
|+.|++|++ .++ +....+ ..| ..|.+++|+|++.++++++. +..|.+|.+....
T Consensus 329 d~~i~iw~~~~~~~~~l~~~~~~-~~~--~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~ 393 (450)
T 2vdu_B 329 TKCIIILEMSEKQKGDLALKQII-TFP--YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNE 393 (450)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEE-ECS--SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTT
T ss_pred CCeEEEEEeccCCCCceeeccEe-ccC--CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCC
Confidence 999999999 554 444444 233 78999999996444444343 5568999987543
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=271.28 Aligned_cols=319 Identities=10% Similarity=0.030 Sum_probs=233.4
Q ss_pred cCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC-CCCeEEEEeCCCeEEEEEEeCCccceeecccc------C
Q 016257 34 PSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKK------M 106 (392)
Q Consensus 34 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~ 106 (392)
+..+++|.++ .......+.+|.+.|++++|+| ++++|++|+.||.|++||+.+.+......... .
T Consensus 22 ~~~~~v~~~~--------~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 93 (408)
T 4a11_B 22 ESTRRVLGLE--------LNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRD 93 (408)
T ss_dssp HHHHHHHTEE--------ECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTT
T ss_pred cCcceeeccc--------cCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccccccc
Confidence 3445667665 2233456788999999999999 99999999999999999998876544332111 1
Q ss_pred CCCCCCCCeEEEEecC-CCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCC---CCeEEEEcCCCcEEEEE
Q 016257 107 PPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLD---SEFLATTSTDGSARIWK 182 (392)
Q Consensus 107 ~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~---~~~l~~~~~d~~i~vwd 182 (392)
....|...|.+++|+| ++.+|++++.||.|++||+++++....+. +...+.++.|+|. +.++++++.|+.|++||
T Consensus 94 ~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 94 HPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp CTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 1123788999999999 78899999999999999999988765544 5678999999884 45899999999999999
Q ss_pred CCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCce-eeeee---------------cccCCC
Q 016257 183 TEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN-KIGHK---------------RLLRKP 246 (392)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~-~~~~~---------------~~~~~~ 246 (392)
+++++.+..+..+. ..|.+++|+|++..+ +++++.|+.|++||+++.. .+..+ ..|...
T Consensus 173 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 173 LKSGSCSHILQGHR-QEILAVSWSPRYDYI----LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp SSSSCCCEEECCCC-SCEEEEEECSSCTTE----EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred CCCcceeeeecCCC-CcEEEEEECCCCCcE----EEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 99998888887654 479999999999852 5789999999999998765 22222 467789
Q ss_pred cEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecc---ccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccc
Q 016257 247 ASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL---HLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 247 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
|.+++|+|++++|++++.||.|++||+.+++........ .....+........+..+++++.|+.|++|++......
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 999999999999999999999999999988765433211 00122222222334557778888999999999765443
Q ss_pred cceee---eeeeeeeeeeceEEEEeeecceeeeecccccccccCCC
Q 016257 324 KEWQI---YSLLLALFLASAVVFYIFFENSDSFWNFPVARNQHGGP 366 (392)
Q Consensus 324 ~~~~~---~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p 366 (392)
..... .............+++++.|+.|++|++.+++.++..+
T Consensus 328 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 328 TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 32210 01111112234567888899999999999988765443
No 95
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.1e-35 Score=270.45 Aligned_cols=273 Identities=14% Similarity=0.186 Sum_probs=226.1
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
..+|+|++|. + ..+++|+. ++.|++|+.. .......+.+|.+.|.+++| ++++|++|+.
T Consensus 133 ~~~v~~~~~d--~---~~l~~g~~------dg~i~iwd~~--------~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~ 191 (435)
T 1p22_A 133 SKGVYCLQYD--D---QKIVSGLR------DNTIKIWDKN--------TLECKRILTGHTGSVLCLQY--DERVIITGSS 191 (435)
T ss_dssp CCCEEEEECC--S---SEEEEEES------SSCEEEEESS--------SCCEEEEECCCSSCEEEEEC--CSSEEEEEET
T ss_pred CCcEEEEEEC--C---CEEEEEeC------CCeEEEEeCC--------CCeEEEEEcCCCCcEEEEEE--CCCEEEEEcC
Confidence 3568999883 3 24555544 6779999876 44556678899999999999 7889999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCcee---ecccCCCCcEEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRII---LDEPKAHKSVLDM 160 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~i~~i 160 (392)
||.|++||+.+++....+. .|...|.+++|++ .++++|+.||.|++||+++++.. .....|...|.++
T Consensus 192 dg~i~vwd~~~~~~~~~~~-------~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 262 (435)
T 1p22_A 192 DSTVRVWDVNTGEMLNTLI-------HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 262 (435)
T ss_dssp TSCEEEEESSSCCEEEEEC-------CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEE
T ss_pred CCeEEEEECCCCcEEEEEc-------CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEE
Confidence 9999999999887654443 3678999999974 59999999999999999887654 4556777899999
Q ss_pred EecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeee
Q 016257 161 DFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK 240 (392)
Q Consensus 161 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~ 240 (392)
+| +++++++++.||.|++||+++++.+..+..+. ..+.++.++ +.. +++++.|+.|++||+++++.+..+
T Consensus 263 ~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~--~~~-----l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 263 DF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK-RGIACLQYR--DRL-----VVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp EE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEE--TTE-----EEEEETTSCEEEEETTTCCEEEEE
T ss_pred Ee--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC-CcEEEEEeC--CCE-----EEEEeCCCeEEEEECCCCCEEEEE
Confidence 99 68899999999999999999999999888664 479999985 444 789999999999999999999999
Q ss_pred cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCce---------eeeeeeccccCcceEEEEEeeCCCeEEEEeCCCe
Q 016257 241 RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME---------INHWSKRLHLGTSIALVEFCPTQRVVLTASKEWG 311 (392)
Q Consensus 241 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 311 (392)
..|...|.+++| ++++|++|+.||.|++||+.+++ ....+ ..| ...|.+++| ++.+|++++.||.
T Consensus 333 ~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~l~~--~~~~l~s~s~Dg~ 406 (435)
T 1p22_A 333 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL-VEH-SGRVFRLQF--DEFQIVSSSHDDT 406 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE-CCC-SSCCCCEEE--CSSCEEECCSSSE
T ss_pred eCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeec-cCC-CCCeEEEEe--CCCEEEEEeCCCE
Confidence 999999999998 78899999999999999998765 44444 578 889999999 7889999999999
Q ss_pred EEEEEeecCcc
Q 016257 312 AMITKLTVPAD 322 (392)
Q Consensus 312 i~iw~~~~~~~ 322 (392)
|++|++.....
T Consensus 407 i~iwd~~~~~~ 417 (435)
T 1p22_A 407 ILIWDFLNDPA 417 (435)
T ss_dssp EEEEC------
T ss_pred EEEEECCCCCC
Confidence 99999986543
No 96
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-37 Score=278.18 Aligned_cols=289 Identities=9% Similarity=0.042 Sum_probs=220.8
Q ss_pred CCCceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEE
Q 016257 2 EGGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCS 81 (392)
Q Consensus 2 ~~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 81 (392)
|....|.+++|+||+ .++|+++. |.+|+ + +.. + ..+++|...|.+++|+|+|
T Consensus 13 ~~~~~v~sv~~SpDG---~~iASas~------D~TV~--d--~~~------~---~~l~gh~~~v~~V~FsPdg------ 64 (588)
T 2j04_A 13 EFEDWKNNLTWARDG---TLYLTTFP------DISIG--Q--PKY------A---KDINCNSKNLFHVKEFPLE------ 64 (588)
T ss_dssp CCSSSSCCEEECTTS---CEEEECSS------SEEEE--E--ECC------C---SCCSSBGGGTEEEEEECCC------
T ss_pred HhhccEEEEEECCCC---CEEEEEcC------Cceee--c--ccc------c---ceecCCCccEEEEEECCCC------
Confidence 446779999999999 56777665 55566 2 221 1 1247899999999999998
Q ss_pred eCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCC-----c
Q 016257 82 TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-----S 156 (392)
Q Consensus 82 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~ 156 (392)
.++.+.+|+.+... .....|...|.+++|||+|++||+++.||.|++||.+. .+..+. |+. .
T Consensus 65 -~~~~~~~~~~~~~~---------~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~s 131 (588)
T 2j04_A 65 -FENKLDFELAQQNG---------LLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRT 131 (588)
T ss_dssp -CCCTTTTSCCCSSC---------SSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTC
T ss_pred -CcceEEEEeCCCce---------EeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCcccccc
Confidence 45555555533221 11223567899999999999999999999999999544 444444 443 4
Q ss_pred EEEEEecCCCCeEEEEcCCCcEEEEECCCCee-------eEEEe---cCCCcceEEEEecCCCCcceEEEEEEeCCccEE
Q 016257 157 VLDMDFSLDSEFLATTSTDGSARIWKTEDGVA-------WTFLT---RNSDEKIELCRFSKDGTKPFLFCTVQRGDKALL 226 (392)
Q Consensus 157 i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~-------~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i 226 (392)
+.+++|||||++|++|+.||+|++||+++++. +.++. ..|...|.+++|+|++ . ++++.|+.+
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-L------aass~D~tV 204 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-L------VAALSNNSV 204 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-E------EEEETTCCE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-E------EEEeCCCeE
Confidence 99999999999999999999999999988752 56663 3345689999999998 3 667779999
Q ss_pred EEEeCCCceee---eee-cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEE--eeCC
Q 016257 227 AVYDISTWNKI---GHK-RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF--CPTQ 300 (392)
Q Consensus 227 ~v~d~~~~~~~---~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~--s~~~ 300 (392)
++||+..++.. ..+ ..|...|.+++|+ |+.||+++ ++.|++||+.+++..... .+| ...|..++| +|++
T Consensus 205 rlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~-~gh-~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 205 FSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLK-TGS-LENFHIIPLNHEKES 279 (588)
T ss_dssp EEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEE-CSC-CSCCCEEEETTCSSC
T ss_pred EEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEE-cCC-CceEEEEEeeeCCCC
Confidence 99999887632 345 3677899999999 68999987 699999999998875443 368 899999999 9999
Q ss_pred CeEEEEeCCCeEEEEEeecCccccceeeeeeeeeeeeeceEEEEeeecceeeeeccccc
Q 016257 301 RVVLTASKEWGAMITKLTVPADWKEWQIYSLLLALFLASAVVFYIFFENSDSFWNFPVA 359 (392)
Q Consensus 301 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~ 359 (392)
..|++++.||. ++|..+. ..+.+++... ++.|+++++|+...+
T Consensus 280 ~~La~a~edG~-klw~~d~--------~~~spd~~l~-------a~~d~~v~lW~~~g~ 322 (588)
T 2j04_A 280 TILLMSNKTSY-KVLLEDE--------LHVTADNIIA-------PYLEKKFKKWSTIWN 322 (588)
T ss_dssp EEEEECSSCEE-EEEESSS--------EEEECCCSSH-------HHHHHHHHHTTTTTT
T ss_pred CEEEEEcCCCC-EEEeecc--------EEECCCceEE-------EEcCCEEEEEECCCC
Confidence 99999999999 9999871 2233333322 223999999997543
No 97
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.4e-35 Score=268.96 Aligned_cols=283 Identities=16% Similarity=0.195 Sum_probs=235.2
Q ss_pred eEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCC
Q 016257 55 VTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG 134 (392)
Q Consensus 55 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 134 (392)
....+.+|.+.+.. ++++++++|++|+.||.|++||+.+++....+. .|...|.+++|+ ++++++|+.||
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~-------~h~~~v~~~~~~--~~~l~s~~~dg 179 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV-------GHTGGVWSSQMR--DNIIISGSTDR 179 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECC-------CCSSCEEEEEEE--TTEEEEEETTS
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEc-------CCCCCEEEEEec--CCEEEEEeCCC
Confidence 34568899987643 355578999999999999999998877544432 377899999997 56999999999
Q ss_pred cEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceE
Q 016257 135 HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214 (392)
Q Consensus 135 ~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 214 (392)
.|++||+++++....+..|...|.++.|+ ++.+++++.|+.|++||+++++.+..+..+. ..+.+++| ++..
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-~~v~~~~~--~~~~--- 251 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHV-AAVRCVQY--DGRR--- 251 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCS-SCEEEEEE--CSSC---
T ss_pred eEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCc-ccEEEEEE--CCCE---
Confidence 99999999999988888888899999996 5689999999999999999999988887654 47999999 5565
Q ss_pred EEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEE
Q 016257 215 FCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALV 294 (392)
Q Consensus 215 ~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 294 (392)
+++++.|+.|++||+++++.+..+..|...+.+++| ++.++++++.||.|++||+++++....+ ..| ...+.++
T Consensus 252 --l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~-~~~v~~~ 325 (445)
T 2ovr_B 252 --VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL-TGH-QSLTSGM 325 (445)
T ss_dssp --EEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEE-CCC-CSCEEEE
T ss_pred --EEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEE-cCC-cccEEEE
Confidence 789999999999999999999999999999999999 7899999999999999999999988776 567 7888888
Q ss_pred EEeeCCCeEEEEeCCCeEEEEEeecCcccccee----eeeeeeeeeeeceEEEEeeecceeeeeccccccccc
Q 016257 295 EFCPTQRVVLTASKEWGAMITKLTVPADWKEWQ----IYSLLLALFLASAVVFYIFFENSDSFWNFPVARNQH 363 (392)
Q Consensus 295 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~ 363 (392)
.+ ++++|++++.||.|++|++.......... ....+.........+++++.|+.|++||+.+++.+.
T Consensus 326 ~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 326 EL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp EE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceee
Confidence 77 56799999999999999997654433221 111222333356788888999999999999887654
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.3e-36 Score=262.39 Aligned_cols=282 Identities=13% Similarity=0.119 Sum_probs=223.9
Q ss_pred eeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCC-EEEEEeCCCcEE
Q 016257 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGS-RFAAGGVDGHLR 137 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~ 137 (392)
..+|.+.|++++|+|++++|++++.|+.|++|++.+.+........ ..|...|.+++|+|+++ +|++++.||.|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS----LRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEE----EECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceee----eecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 4579999999999999999999999999999999987621111111 13778999999999999 999999999999
Q ss_pred EEeC-CCCceeecccC--CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCC---------CeeeEEEecCCCcceEEEEe
Q 016257 138 IMHW-PSLRIILDEPK--AHKSVLDMDFSLDSEFLATTSTDGSARIWKTED---------GVAWTFLTRNSDEKIELCRF 205 (392)
Q Consensus 138 i~d~-~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~v~~~~~ 205 (392)
+||+ ++++. ..+.. |...|.+++|+| +++|++++.|+.|++||+++ ++++..+. +...+.+++|
T Consensus 83 ~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~ 158 (342)
T 1yfq_A 83 KVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFTMDT 158 (342)
T ss_dssp EECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEEEEE
T ss_pred EEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCceEEEEe
Confidence 9999 87765 45666 778999999999 99999999999999999987 66665555 4557999999
Q ss_pred cCCCCcceEEEEEEeCCccEEEEEeCCC-cee--eeeecccCCCcEEEEECC-CCCEEEEEeCCCcEEEEecCCc-----
Q 016257 206 SKDGTKPFLFCTVQRGDKALLAVYDIST-WNK--IGHKRLLRKPASVLSISL-DGKYLAMGSKDGDICVVDVKKM----- 276 (392)
Q Consensus 206 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~----- 276 (392)
+|++ +++++.++.|++||+++ +.. ......+...+.+++|+| +++++++++.||.|++|+++..
T Consensus 159 ~~~~-------l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 159 NSSR-------LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp CSSE-------EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred cCCc-------EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccc
Confidence 9886 47788899999999998 443 334456778999999999 9999999999999999999876
Q ss_pred -eeeeeeecccc--------CcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee--eeeeeeeeeeceEEEEe
Q 016257 277 -EINHWSKRLHL--------GTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI--YSLLLALFLASAVVFYI 345 (392)
Q Consensus 277 -~~~~~~~~~~~--------~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 345 (392)
+....+ ..|. ...|.+++|+|++++|++++.||.|++|++........... ...+.........++++
T Consensus 232 ~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~ 310 (342)
T 1yfq_A 232 SSKRFAF-RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLA 310 (342)
T ss_dssp CTTCEEE-ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEE
T ss_pred cccceee-ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEecCCCCeEEEE
Confidence 444444 3441 23999999999999999999999999999986654332211 11111112455678888
Q ss_pred eecce-eeeecc
Q 016257 346 FFENS-DSFWNF 356 (392)
Q Consensus 346 ~~d~~-i~~W~~ 356 (392)
+.|+. .+.+..
T Consensus 311 s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 311 TSDDTFKTNAAI 322 (342)
T ss_dssp EECTHHHHCSSS
T ss_pred ecCCcccccccc
Confidence 89998 666654
No 99
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=279.53 Aligned_cols=246 Identities=11% Similarity=0.010 Sum_probs=194.6
Q ss_pred CCCCeeEEEEcCCC---------CeEEE-------------------EeCCCeEEEEEEeCCccceeeccccCCCCCCCC
Q 016257 62 SEGDPMTIAVNPSG---------DDFVC-------------------STTNGGCKLFEVYGGATDINLLAKKMPPLQDAG 113 (392)
Q Consensus 62 h~~~v~~~~~sp~~---------~~l~~-------------------~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 113 (392)
+.+.|.+++|+|++ ++||+ ++.|++|+||++.+++....... ....|.+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~---~l~~~~~ 208 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQ---TIVHSFG 208 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEE---EEEECCC
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEE---EEEecCC
Confidence 57889999999876 56666 44678999999988764221100 0012567
Q ss_pred CeEEEEecCC------CCEEEEEeCCCcEEEEeCCCCcee-----------ecccCCCCcEEEEEecCCCCeEEEEcCCC
Q 016257 114 PQKCLSFSVD------GSRFAAGGVDGHLRIMHWPSLRII-----------LDEPKAHKSVLDMDFSLDSEFLATTSTDG 176 (392)
Q Consensus 114 ~v~~~~~s~~------~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~~i~~i~~~~~~~~l~~~~~d~ 176 (392)
.|.+++|+|+ +.+|++++.||+|++||+.+++.. ..+..|...|++++|++++ .|++|+.||
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCC
Confidence 8999999996 579999999999999999866421 2345666799999999864 899999999
Q ss_pred cEEEEECCCCe-eeEEEecCCCcceEEE--EecCCC-CcceEEEEEEeCCccEEEEEeCCCceeeeeecccC--CCcEEE
Q 016257 177 SARIWKTEDGV-AWTFLTRNSDEKIELC--RFSKDG-TKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR--KPASVL 250 (392)
Q Consensus 177 ~i~vwd~~~~~-~~~~~~~~~~~~v~~~--~~~~~~-~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~v~~~ 250 (392)
+|++||++++. +...+..| ...|.++ +|+|++ .. +++++.|++|++||+++++....+..|. ..+.++
T Consensus 288 tV~lWD~~~~~~~~~~~~~H-~~~V~sv~~~~s~~g~~~-----laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVH-DSYILSVSTAYSDFEDTV-----VSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp EEEEEETTBCSSCSEEEECS-SSCEEEEEEECCTTSCCE-----EEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred EEEEEECCCCCCceEEeecc-cccEEEEEEEcCCCCCeE-----EEEeccCCeEEEEECCCCCcccccccccccCcccce
Confidence 99999998764 34445554 4589999 578887 54 7999999999999999887766665554 357899
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 251 SISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
+|+|+++.+++++.|++|++||++++.....+ .+| ...|++++|+|+|++|++|+.||+|++|++..
T Consensus 362 ~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l-~gH-~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL-VSR-ETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEETTTTEEEEECSSSEEEEEETTCTTCCEEE-EEC-SSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred EeCCCcCeEEEeCCCCcEEEEECcccccceee-ecC-CCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 99999999999999999999999998876655 468 89999999999999999999999999999864
No 100
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.4e-36 Score=272.12 Aligned_cols=244 Identities=12% Similarity=0.082 Sum_probs=196.6
Q ss_pred CCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCcc-----------ceeeccccCCCCCCC------------CCeEEE
Q 016257 62 SEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGAT-----------DINLLAKKMPPLQDA------------GPQKCL 118 (392)
Q Consensus 62 h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~-----------~~~~~~~~~~~~~~~------------~~v~~~ 118 (392)
|.+.|++++|+|+|++||+|+.||.|+||++.+.+. ...+. .|. ..|.++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-------~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-------SHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-------CCCCEEEGGGTEEECCCCCEE
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-------cccccccccccccccCceEEE
Confidence 578999999999999999999999999999987652 11111 254 789999
Q ss_pred EecCCC--CEEEEEeCCCcEEEEeCCCCcee---------------------------------------ec-ccCCCCc
Q 016257 119 SFSVDG--SRFAAGGVDGHLRIMHWPSLRII---------------------------------------LD-EPKAHKS 156 (392)
Q Consensus 119 ~~s~~~--~~l~~~~~dg~i~i~d~~~~~~~---------------------------------------~~-~~~~~~~ 156 (392)
+|+|++ .+|++++.|+.|++||+.+++.. .. ...|...
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 999998 79999999999999998764331 01 2456778
Q ss_pred EEEEEecCCCCeEEEEcCCCcEEEEECCC-CeeeEEE------ecCCCcceEEEEecCCC-CcceEEEEEEeCCccEEEE
Q 016257 157 VLDMDFSLDSEFLATTSTDGSARIWKTED-GVAWTFL------TRNSDEKIELCRFSKDG-TKPFLFCTVQRGDKALLAV 228 (392)
Q Consensus 157 i~~i~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~------~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~d~~i~v 228 (392)
|.+++|+|++++|+++ .|+.|++||++. ++....+ ...+...|.+++|+|++ .. +++++.|+.|++
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-----l~s~~~dg~i~i 253 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT-----FVYSSSKGTIRL 253 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE-----EEEEETTSCEEE
T ss_pred eEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE-----EEEEeCCCeEEE
Confidence 9999999999999998 799999999984 4444432 22345579999999998 65 799999999999
Q ss_pred EeCCCcee----eeeecccCC------------CcEEEEECCCCCEEEEEeCCCcEEEEecCC-ceeeeeeeccccCc--
Q 016257 229 YDISTWNK----IGHKRLLRK------------PASVLSISLDGKYLAMGSKDGDICVVDVKK-MEINHWSKRLHLGT-- 289 (392)
Q Consensus 229 ~d~~~~~~----~~~~~~~~~------------~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~-- 289 (392)
||+++++. ...+..+.. .|.+++|+|++++|++++. +.|++||+++ ++.+..+ ..| ..
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~-~~~-~~~~ 330 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY-QVH-EYLR 330 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE-ESC-GGGT
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee-ecc-cccc
Confidence 99998876 566666665 8999999999999999998 9999999997 6666555 345 32
Q ss_pred -------------ceEEEEEeeCCCeEEEEeCCCeEEEEEeecCc
Q 016257 290 -------------SIALVEFCPTQRVVLTASKEWGAMITKLTVPA 321 (392)
Q Consensus 290 -------------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 321 (392)
.+..++|+|++++|++|+.||.|++|++....
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 13459999999999999999999999997654
No 101
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.6e-36 Score=268.01 Aligned_cols=289 Identities=14% Similarity=0.117 Sum_probs=221.6
Q ss_pred CCeeEEEEcCCCCeEE-EEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC-CCCEEEEEeCCCcEEEEeC
Q 016257 64 GDPMTIAVNPSGDDFV-CSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHW 141 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~ 141 (392)
.....++++|+...++ +++.+|.|+||++......... ......|.+.|.+++|+| ++++|++|+.||.|++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~---~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~ 111 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKN---VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEI 111 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTT---CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEEC
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCC---CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEc
Confidence 3455688888775444 5788999999998654321111 111224889999999999 9999999999999999999
Q ss_pred CCC-------ceeecccCCCCcEEEEEecCCC-CeEEEEcCCCcEEEEECCCCeeeEEEe-cCCCcceEEEEecCCCCcc
Q 016257 142 PSL-------RIILDEPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLT-RNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 142 ~~~-------~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~ 212 (392)
.++ +.+..+..|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+. ..+...|.+++|+|++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~- 190 (402)
T 2aq5_A 112 PDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL- 190 (402)
T ss_dssp CTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC-
T ss_pred cCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE-
Confidence 887 4556677788899999999998 699999999999999999999988883 344568999999999987
Q ss_pred eEEEEEEeCCccEEEEEeCCCceeeeee-cccCCC-cEEEEECCCCCEEEEE---eCCCcEEEEecCCcee-eeeeeccc
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNKIGHK-RLLRKP-ASVLSISLDGKYLAMG---SKDGDICVVDVKKMEI-NHWSKRLH 286 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~~~~~ 286 (392)
+++++.|+.|++||+++++.+..+ ..|... +.++.|+|++++|++| +.|+.|++||+++++. .......|
T Consensus 191 ----l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 266 (402)
T 2aq5_A 191 ----ICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT 266 (402)
T ss_dssp ----EEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC
T ss_pred ----EEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC
Confidence 789999999999999999988877 667655 8999999999999999 7899999999998764 33332345
Q ss_pred cCcceEEEEEeeCCCeEEE-EeCCCeEEEEEeecCcc-ccceeee---eeeeeeeeeceEEEEeeecceeeeeccccccc
Q 016257 287 LGTSIALVEFCPTQRVVLT-ASKEWGAMITKLTVPAD-WKEWQIY---SLLLALFLASAVVFYIFFENSDSFWNFPVARN 361 (392)
Q Consensus 287 ~~~~i~~~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~ 361 (392)
...+.+++|+|++++|++ ++.||.|++|++..... ....... ..+.+........+.++.++.+++|++..++.
T Consensus 267 -~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 267 -SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERKC 345 (402)
T ss_dssp -CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETTEE
T ss_pred -CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEEcCCCcE
Confidence 778999999999998865 55799999999987653 1111110 11111111111122234577999999987653
No 102
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.4e-36 Score=260.51 Aligned_cols=245 Identities=10% Similarity=0.099 Sum_probs=195.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC--CCCeEEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP--SGDDFVCS 81 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~~~~l~~~ 81 (392)
.++|++++|+|++. ++++|+. |+.|++|++... .......+.+|.+.|.+++|+| ++++|++|
T Consensus 13 ~~~V~~v~~s~~g~---~lasgs~------D~~v~lwd~~~~------~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 13 EDMIHDAQMDYYGT---RLATCSS------DRSVKIFDVRNG------GQILIADLRGHEGPVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp -CCEEEEEECGGGC---EEEEEET------TTEEEEEEEETT------EEEEEEEEECCSSCEEEEEECCGGGSSCEEEE
T ss_pred cCeEEEeeEcCCCC---EEEEEeC------CCeEEEEEecCC------CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEE
Confidence 46899999999884 4665554 778999998632 1224567899999999999986 48899999
Q ss_pred eCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC--CCEEEEEeCCCcEEEEeCCCCce---eecccCCCCc
Q 016257 82 TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRI---ILDEPKAHKS 156 (392)
Q Consensus 82 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~ 156 (392)
+.|++|++||+.+++...... ...|...|.+++|+|+ +.+|++|+.|+.|++||++++.. ......|...
T Consensus 78 s~D~~v~iWd~~~~~~~~~~~-----~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~ 152 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWEKSHE-----HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152 (316)
T ss_dssp ETTSCEEEECCSSSCCCEEEE-----ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSC
T ss_pred ECCCEEEEEECCCCcceEEEE-----ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCC
Confidence 999999999998764221111 1137789999999997 78999999999999999987632 2344566678
Q ss_pred EEEEEecCC-----------------CCeEEEEcCCCcEEEEECCCC---eeeEEEecCCCcceEEEEecCCC----Ccc
Q 016257 157 VLDMDFSLD-----------------SEFLATTSTDGSARIWKTEDG---VAWTFLTRNSDEKIELCRFSKDG----TKP 212 (392)
Q Consensus 157 i~~i~~~~~-----------------~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~----~~~ 212 (392)
|.+++|+|+ +++|++++.|++|++||++.. +....+..| ...|.+++|+|++ ..
T Consensus 153 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h-~~~V~~v~~sp~~~~~~~~- 230 (316)
T 3bg1_A 153 CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH-SDWVRDVAWAPSIGLPTST- 230 (316)
T ss_dssp BCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC-SSCEEEEECCCCSSCSCCE-
T ss_pred cceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC-CCceEEEEecCCCCCCCce-
Confidence 999999997 478999999999999999755 345555544 4589999999986 43
Q ss_pred eEEEEEEeCCccEEEEEeCCCce----eeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecC
Q 016257 213 FLFCTVQRGDKALLAVYDISTWN----KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 274 (392)
+++++.|+.|++||+++.. ....+..|...|.+++|+|++++|++++.|+.|++|+..
T Consensus 231 ----las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 231 ----IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ----EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ----EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 7999999999999997621 123345678899999999999999999999999999975
No 103
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.5e-35 Score=259.01 Aligned_cols=289 Identities=11% Similarity=0.048 Sum_probs=226.4
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
.++|+|++|+|+...-.++++|+. ++.|++|+++... ......+.+|.+.|.+++|+|++++|++++.
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~------dg~i~iw~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSW------ANDVRCWEVQDSG------QTIPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEET------TSEEEEEEECTTS------CEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred CCceEEEEEcCCCCCceEEEEECC------CCcEEEEEcCCCC------ceeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 578999999998400034555544 6779999997422 2333668889999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEe--cCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF--SVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMD 161 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~ 161 (392)
|+.|++||+.+++.... ..|...|.+++| ++++++|++++.|+.|++||+++++.+..+..+ ..+.++.
T Consensus 107 dg~v~iwd~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~ 177 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQI--------AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCAD 177 (368)
T ss_dssp TSEEEEEETTTTEEEEE--------EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEE
T ss_pred CCcEEEEEcCCCCceee--------ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEE
Confidence 99999999988764332 137789999999 899999999999999999999998877665544 4666776
Q ss_pred ecCCCCeEEEEcCCCcEEEEECCCCeeeE-EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCc---eee
Q 016257 162 FSLDSEFLATTSTDGSARIWKTEDGVAWT-FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW---NKI 237 (392)
Q Consensus 162 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~---~~~ 237 (392)
+.+ ..+++++.++.+++|+++...... ...........++.+.++..... ..+++++.|+.|++||++.. ...
T Consensus 178 ~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~i~~~~~~~~~~~~ 254 (368)
T 3mmy_A 178 VIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP-TGFALGSIEGRVAIHYINPPNPAKDN 254 (368)
T ss_dssp EET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE-EEEEEEETTSEEEEEESSCSCHHHHS
T ss_pred ecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC-CeEEEecCCCcEEEEecCCCCccccc
Confidence 664 478888899999999998765433 33333344566777766554311 11688999999999999986 344
Q ss_pred eeecccCC------------CcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEE
Q 016257 238 GHKRLLRK------------PASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLT 305 (392)
Q Consensus 238 ~~~~~~~~------------~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 305 (392)
..+..|.. .|++++|+|++++|++++.||.|++||+++++.+..+ ..| ...|++++|+|+|++|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~-~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS-EQL-DQPISACCFNHNGNIFAY 332 (368)
T ss_dssp EEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC-CCC-SSCEEEEEECTTSSCEEE
T ss_pred eeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe-cCC-CCCceEEEECCCCCeEEE
Confidence 55555554 7999999999999999999999999999999988776 477 889999999999999999
Q ss_pred EeCCCeEEEEEee
Q 016257 306 ASKEWGAMITKLT 318 (392)
Q Consensus 306 ~~~dg~i~iw~~~ 318 (392)
++.|+..+.|++.
T Consensus 333 ~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 333 ASSYDWSKGHEFY 345 (368)
T ss_dssp EECCCSTTCGGGC
T ss_pred Eeccccccccccc
Confidence 9999865555443
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4.4e-35 Score=258.85 Aligned_cols=280 Identities=13% Similarity=0.090 Sum_probs=210.5
Q ss_pred EeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEE-EEEeCCCcE
Q 016257 58 VFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHL 136 (392)
Q Consensus 58 ~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i 136 (392)
.+..|.+.|++++|+|||++|++|+.++ +++|++...+..... +...+..+++.++++.+ ++++.|++|
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ---------EMRHLSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE---------ECSCCCEEEECTTSSEEEEECSSTTEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee---------ecCCeEEEEEcCCCCEEEEEECCccEE
Confidence 4578999999999999999999998776 889998765433221 11247788898888877 567778999
Q ss_pred EEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCC-eeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 137 RIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-VAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 137 ~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
++||+.+++.+..+. +...|.++.|+++. ++++ .|+.|++||++++ +.+..+.. +...+++++ .. +
T Consensus 84 ~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~--l- 150 (355)
T 3vu4_A 84 HIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GL--L- 150 (355)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TE--E-
T ss_pred EEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--cE--E-
Confidence 999999998877654 56689999999764 4444 3789999999988 66666554 345566777 22 1
Q ss_pred EEEE-eCCccEEEEEeCCCce----------------eeeeecccCCCcEEEEECCCCCEEEEEeCCCc-EEEEecCCce
Q 016257 216 CTVQ-RGDKALLAVYDISTWN----------------KIGHKRLLRKPASVLSISLDGKYLAMGSKDGD-ICVVDVKKME 277 (392)
Q Consensus 216 ~~~~-~~~d~~i~v~d~~~~~----------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~iwd~~~~~ 277 (392)
++. ++.++.|++||+++++ .+..+..|...|++++|+|+|++|++|+.|++ |++||+++++
T Consensus 151 -a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 151 -VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp -EEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred -EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 233 7899999999999765 15678899999999999999999999999998 9999999999
Q ss_pred eeeeeecc-ccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccc---------------eeee---e--------
Q 016257 278 INHWSKRL-HLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKE---------------WQIY---S-------- 330 (392)
Q Consensus 278 ~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~---------------~~~~---~-------- 330 (392)
.+..+..+ | ...|.+++|+|++++|++++.|+.|++|++......+. |... .
T Consensus 230 ~~~~~~~g~h-~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (355)
T 3vu4_A 230 LVREFRRGLD-RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRG 308 (355)
T ss_dssp EEEEEECTTC-CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCC
T ss_pred EEEEEEcCCC-CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCc
Confidence 98888645 8 89999999999999999999999999999975532111 1000 0
Q ss_pred eeeeeeeeceEEEEeeecceeeeecccccccc
Q 016257 331 LLLALFLASAVVFYIFFENSDSFWNFPVARNQ 362 (392)
Q Consensus 331 ~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~ 362 (392)
...........++++..|+.+++|++..++..
T Consensus 309 ~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 309 CKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp CEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred eEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 11111223446777778999999999876543
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=287.58 Aligned_cols=254 Identities=13% Similarity=0.104 Sum_probs=209.6
Q ss_pred EEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC--CCEEEEEeCCC
Q 016257 57 YVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDG 134 (392)
Q Consensus 57 ~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg 134 (392)
..+.+|.+.|++++|+|++++|++|+.||.|++||+.+......... ..|.++|.+++|+|+ +++|++|+.||
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l-----~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-----TGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceec-----cCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 45789999999999999999999999999999999985432111111 137889999999987 99999999999
Q ss_pred cEEEEeCCCCc--eeecccCCCCcEEEEEecCC--CCeEEEEcCCCcEEEEECCCCee--eEEEecCCCcceEEEEecCC
Q 016257 135 HLRIMHWPSLR--IILDEPKAHKSVLDMDFSLD--SEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFSKD 208 (392)
Q Consensus 135 ~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~ 208 (392)
.|++||+.+++ .......|...|.+++|+|+ ++.+++++.||.|++||++++.. ...+.. +...|.+++|+|.
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~-~~~~v~~l~~~p~ 156 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPA 156 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC-CSSCEEEEEECCC
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec-CCCceEEEEecCc
Confidence 99999999886 56666778889999999999 99999999999999999987732 333333 4558999999994
Q ss_pred -------------CCcceEEEEEEeCCccEEEEEeCCCc----eeeeeecccCCCcEEEEECCC---CCEEEEEeCCCcE
Q 016257 209 -------------GTKPFLFCTVQRGDKALLAVYDISTW----NKIGHKRLLRKPASVLSISLD---GKYLAMGSKDGDI 268 (392)
Q Consensus 209 -------------~~~~~~~~~~~~~~d~~i~v~d~~~~----~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i 268 (392)
+.. +++++.|+.|++||++++ .....+..|...|++++|+|+ +++|++++.||.|
T Consensus 157 ~~~~~~~~~~~~d~~~-----l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 157 TIEEDGEHNGTKESRK-----FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp C---------CGGGCC-----EEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred ccccccccccCCCCCE-----EEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 665 799999999999999876 455677789999999999999 8999999999999
Q ss_pred EEEecCCceee----eeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcc
Q 016257 269 CVVDVKKMEIN----HWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 269 ~iwd~~~~~~~----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 322 (392)
++||+.+++.. ......| ...|++++|+|+|++|++++.||.|++|++.....
T Consensus 232 ~iwd~~~~~~~~~~~~~~~~~~-~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 232 IIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp EEEEESSSSSCCBCCBSSSSCC-SSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSC
T ss_pred EEecCCCCCCcceeEEeccCCC-CCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCC
Confidence 99999986421 1111346 78999999999999999999999999999986543
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.5e-34 Score=259.22 Aligned_cols=273 Identities=12% Similarity=0.112 Sum_probs=219.8
Q ss_pred CeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 016257 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL 144 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 144 (392)
..+.|+||++ +.|++| .|++|+|||..+++....+... .|...|++++|+|+|++|++|+.||.|++||++++
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~-----~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQME-----QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 179 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECC-----STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEec-----CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC
Confidence 4677999975 577776 4899999999988755444322 36778999999999999999999999999999999
Q ss_pred ceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCee-eEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc
Q 016257 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA-WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (392)
Q Consensus 145 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d 223 (392)
+.+..+..|...+.+++++ +..|++++.|+.+++||.+.... +..+..+ ...+..+.++|++.. +++++.|
T Consensus 180 ~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h-~~~~~~~~~~~~g~~-----l~s~~~D 251 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGH-SQEVCGLRWAPDGRH-----LASGGND 251 (420)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECC-SSCEEEEEECTTSSE-----EEEEETT
T ss_pred cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEeccc-ccceeeeeecCCCCe-----eeeeecc
Confidence 9998888888899988875 67999999999999999987544 4455544 557999999999997 8999999
Q ss_pred cEEEEEeCCCcee----eeeecccCCCcEEEEECCCC-CEEEE--EeCCCcEEEEecCCceeeeeeeccccCcceEEEEE
Q 016257 224 ALLAVYDISTWNK----IGHKRLLRKPASVLSISLDG-KYLAM--GSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF 296 (392)
Q Consensus 224 ~~i~v~d~~~~~~----~~~~~~~~~~v~~~~~s~~~-~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 296 (392)
+.+++||..+++. +.....+...|.+++|+|++ .++++ |+.|+.|++||+.+++....+.. ...+.++.|
T Consensus 252 ~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~---~~~v~~~~~ 328 (420)
T 4gga_A 252 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA---HSQVCSILW 328 (420)
T ss_dssp SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC---SSCEEEEEE
T ss_pred ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc---ccceeeeee
Confidence 9999999987653 34566788899999999975 55555 45799999999999998887642 568999999
Q ss_pred eeCCCeEEEEe--CCCeEEEEEeecCccccc--------eeeeeeeeeeeeeceEEEEeeecceeeeecccccc
Q 016257 297 CPTQRVVLTAS--KEWGAMITKLTVPADWKE--------WQIYSLLLALFLASAVVFYIFFENSDSFWNFPVAR 360 (392)
Q Consensus 297 s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~ 360 (392)
+|+++.+++++ .|+.|++|++........ ..+.+.+ ....+++++.|++|++|++...+
T Consensus 329 ~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp-----dg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 329 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-----DGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-----TSSCEEEEETTTEEEEECCSCSS
T ss_pred cCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-----CCCEEEEEecCCeEEEEECCCCC
Confidence 99999888765 789999999976544322 2222222 34467888899999999997554
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-35 Score=256.62 Aligned_cols=267 Identities=10% Similarity=0.066 Sum_probs=206.3
Q ss_pred EEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC-------
Q 016257 70 AVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP------- 142 (392)
Q Consensus 70 ~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~------- 142 (392)
.+.++++.|++|+.||.|++||+.+++....+. ...|.++.|+|+ +++++.|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILD 110 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEee
Confidence 344578899999999999999999887655543 235677788887 9999999999999665
Q ss_pred --CCceeeccc-CCCCcEEEEEecC--CCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEE
Q 016257 143 --SLRIILDEP-KAHKSVLDMDFSL--DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCT 217 (392)
Q Consensus 143 --~~~~~~~~~-~~~~~i~~i~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 217 (392)
+++.+.... .|...|.+++|+| +++++++++.|++|++||+++++.......++...+.+++|+|++.. +
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~-----l 185 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL-----L 185 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCE-----E
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCE-----E
Confidence 444333333 4456899999999 99999999999999999999998877666666667999999999997 7
Q ss_pred EEeCCccEEEEEeCCCceee-eeecc-cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec--cccCcce--
Q 016257 218 VQRGDKALLAVYDISTWNKI-GHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR--LHLGTSI-- 291 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~~~-~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~i-- 291 (392)
++++.|+.|++||+++++.+ ..+.. |..+|++++|+|++.+|++++ |+.|++||+++++....+.. .| ...+
T Consensus 186 asg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~ 263 (343)
T 3lrv_A 186 ALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIP-EFKTGT 263 (343)
T ss_dssp EEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC------CC
T ss_pred EEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccc-cccccc
Confidence 88999999999999998877 67777 899999999999999999999 55999999999876544321 12 2333
Q ss_pred EEEEEeeCCCeEEEEeC-CCeEEEEEeecCccccceee----eeeeeeeeeeceEEEEeeecceeeeeccc
Q 016257 292 ALVEFCPTQRVVLTASK-EWGAMITKLTVPADWKEWQI----YSLLLALFLASAVVFYIFFENSDSFWNFP 357 (392)
Q Consensus 292 ~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~i~~W~~~ 357 (392)
.+++|+|+|++|++++. |+.+++|++..... .|.. ......+......+++++.|+.++++-..
T Consensus 264 ~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK--NWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTC--SEEEEEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred eEEEECCCCCEEEEecCCCCcEEEEEEccccc--ceEecCceeEecCccccccceeEEEecCCceEEEEec
Confidence 46999999999999998 99999999975433 3443 11111111234467777789988887643
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.6e-35 Score=258.54 Aligned_cols=280 Identities=13% Similarity=0.026 Sum_probs=203.6
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCC-------eEEEEEEeCCccceeec---cccCCCCCCCCCeEEEEecCCCCEEEEEe-
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNG-------GCKLFEVYGGATDINLL---AKKMPPLQDAGPQKCLSFSVDGSRFAAGG- 131 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~-------~i~iw~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 131 (392)
.-+|++++|+||+++|++|+.+. .|++|++.......... ........|...+.+++++ ++.+++|.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45899999999999999987543 59999997664321110 0111112356677777664 55666653
Q ss_pred ----------CCCcEEEEeCCCCceeec------c---cCCCCcEEEEEecCCCCeEEEE--cCCCcEEEEECCCCeeeE
Q 016257 132 ----------VDGHLRIMHWPSLRIILD------E---PKAHKSVLDMDFSLDSEFLATT--STDGSARIWKTEDGVAWT 190 (392)
Q Consensus 132 ----------~dg~i~i~d~~~~~~~~~------~---~~~~~~i~~i~~~~~~~~l~~~--~~d~~i~vwd~~~~~~~~ 190 (392)
.|+.+++|++.+...... . ..+...+..++|+|||++++++ +.|++|++||+++++++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 577899999865432211 1 1122358899999999997654 478999999999999988
Q ss_pred EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeee--eecccCCCcEEEEECCCCCEEEEEeCCC--
Q 016257 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIG--HKRLLRKPASVLSISLDGKYLAMGSKDG-- 266 (392)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg-- 266 (392)
.+. +...|.+++|+|+++. +++++. +.+.+|+..+++.+. ....|...+.+++|+|+++++++++.|+
T Consensus 172 ~~~--~~~~V~~v~fspdg~~-----l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~ 243 (365)
T 4h5i_A 172 EIE--TRGEVKDLHFSTDGKV-----VAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK 243 (365)
T ss_dssp EEE--CSSCCCEEEECTTSSE-----EEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC
T ss_pred EeC--CCCceEEEEEccCCce-----EEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc
Confidence 876 3346999999999996 566664 456677776666543 3345677899999999999999999887
Q ss_pred --cEEEEecCCceeee---eeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcccc---------ceeeeeee
Q 016257 267 --DICVVDVKKMEINH---WSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWK---------EWQIYSLL 332 (392)
Q Consensus 267 --~i~iwd~~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~---------~~~~~~~~ 332 (392)
.+++|++....... .....| ...|++++|+|||++||+|+.|++|+|||+...+... +..+.+++
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP 322 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT
T ss_pred eeEEeecccccceecceeeeeecCC-CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC
Confidence 58889987765322 122467 7899999999999999999999999999997654322 23333443
Q ss_pred eeeeeeceEEEEeeecceeeeecccc
Q 016257 333 LALFLASAVVFYIFFENSDSFWNFPV 358 (392)
Q Consensus 333 ~~~~~~~~~~~~~~~d~~i~~W~~~~ 358 (392)
....+++++.|++||||+++.
T Consensus 323 -----dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 323 -----DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp -----TSCEEEEEETTSEEEEEECCT
T ss_pred -----CCCEEEEEeCCCeEEEEEcCC
Confidence 344677888999999999964
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.7e-34 Score=250.84 Aligned_cols=260 Identities=14% Similarity=0.100 Sum_probs=206.3
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC--CCCeEEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP--SGDDFVCS 81 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~~~~l~~~ 81 (392)
.++|+|++|+|++. ++++|+. ++.|++|+++.... .......+.+|...|++++|+| ++++|+++
T Consensus 11 ~~~v~~~~~~~~~~---~l~~~~~------dg~i~iw~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 11 DDLVHDVVYDFYGR---HVATCSS------DQHIKVFKLDKDTS----NWELSDSWRAHDSSIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp SSCEEEEEECSSSS---EEEEEET------TSEEEEEEECSSSC----CEEEEEEEECCSSCEEEEEECCGGGCSEEEEE
T ss_pred ccceeEEEEcCCCC---EEEEeeC------CCeEEEEECCCCCC----cceecceeccCCCcEEEEEEcCCCCCCEEEEE
Confidence 46899999999884 4555544 67899999975432 1234567889999999999999 69999999
Q ss_pred eCCCeEEEEEEeCCccceeec--cccCCCCCCCCCeEEEEecCC--CCEEEEEeCCCcEEEEeCCCCceeeccc------
Q 016257 82 TTNGGCKLFEVYGGATDINLL--AKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRIILDEP------ 151 (392)
Q Consensus 82 ~~d~~i~iw~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~------ 151 (392)
+.|+.|++||+..++...... ........|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+.
T Consensus 78 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 78 SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 999999999998764211000 000011137789999999999 9999999999999999998876543322
Q ss_pred -------CCCCcEEEEEecCC---CCeEEEEcCCCcEEEEECCCCee--eEEEecCCCcceEEEEecCCC----CcceEE
Q 016257 152 -------KAHKSVLDMDFSLD---SEFLATTSTDGSARIWKTEDGVA--WTFLTRNSDEKIELCRFSKDG----TKPFLF 215 (392)
Q Consensus 152 -------~~~~~i~~i~~~~~---~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~----~~~~~~ 215 (392)
.+...+.+++|+|+ +.++++++.|+.+.+|+...++. ...+.. +...|.+++|+|++ ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~---- 232 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQL---- 232 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEE----
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC-CCcceeEEEECCCCCCcceE----
Confidence 45568999999997 89999999999998888877765 444444 45589999999998 44
Q ss_pred EEEEeCCccEEEEEeCCCc----------------------------------------------eeeeeecccCCCcEE
Q 016257 216 CTVQRGDKALLAVYDISTW----------------------------------------------NKIGHKRLLRKPASV 249 (392)
Q Consensus 216 ~~~~~~~d~~i~v~d~~~~----------------------------------------------~~~~~~~~~~~~v~~ 249 (392)
+++++.|+.|++||++.+ +.+..+..|...|++
T Consensus 233 -l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 311 (351)
T 3f3f_A 233 -IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWS 311 (351)
T ss_dssp -EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEE
T ss_pred -EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEE
Confidence 789999999999999874 556667788999999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 250 LSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
++|+|++++|++++.||.|++||+.+++....+
T Consensus 312 ~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 312 VSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 999999999999999999999999987655443
No 110
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-34 Score=252.72 Aligned_cols=248 Identities=11% Similarity=0.114 Sum_probs=201.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCC--CCeEEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS--GDDFVCS 81 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~--~~~l~~~ 81 (392)
.++|++++|+|++. ++++|+. ++.|++|.++.. .......+.+|.+.|++++|+|+ +++|+++
T Consensus 11 ~~~v~~~~~s~~~~---~l~~~~~------dg~i~iw~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 75 (379)
T 3jrp_A 11 NELIHDAVLDYYGK---RLATCSS------DKTIKIFEVEGE------THKLIDTLTGHEGPVWRVDWAHPKFGTILASC 75 (379)
T ss_dssp CCCEEEEEECSSSS---EEEEEET------TSCEEEEEEETT------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred cccEEEEEEcCCCC---EEEEEEC------CCcEEEEecCCC------cceeeeEecCCCCcEEEEEeCCCCCCCEEEEe
Confidence 46899999999984 4555444 677999999733 23445678899999999999987 8999999
Q ss_pred eCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC--CCEEEEEeCCCcEEEEeCCCCc--eeecccCCCCcE
Q 016257 82 TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLR--IILDEPKAHKSV 157 (392)
Q Consensus 82 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i 157 (392)
+.||.|++||+.+++....... ..|...|.+++|+|+ +++|++++.|+.|++||++++. ....+..|...|
T Consensus 76 ~~dg~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v 150 (379)
T 3jrp_A 76 SYDGKVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 150 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE
T ss_pred ccCCEEEEEEcCCCceeEeeee-----cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce
Confidence 9999999999998762221111 126789999999999 9999999999999999998773 333455677799
Q ss_pred EEEEecC-------------CCCeEEEEcCCCcEEEEECCCCee----eEEEecCCCcceEEEEecCC---CCcceEEEE
Q 016257 158 LDMDFSL-------------DSEFLATTSTDGSARIWKTEDGVA----WTFLTRNSDEKIELCRFSKD---GTKPFLFCT 217 (392)
Q Consensus 158 ~~i~~~~-------------~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~ 217 (392)
.+++|+| ++++|++++.|+.|++||+++++. ...+.. +...|.+++|+|+ +.. +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~-----l 224 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSY-----L 224 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEE-----E
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec-ccCcEeEEEECCCCCCCCe-----E
Confidence 9999999 699999999999999999987643 334443 4558999999999 665 7
Q ss_pred EEeCCccEEEEEeCCCce-----eeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCce
Q 016257 218 VQRGDKALLAVYDISTWN-----KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME 277 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 277 (392)
++++.|+.|++||++++. .......+...+.+++|+|++++|++++.||.|++||+....
T Consensus 225 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 225 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred EEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 899999999999999863 223334477899999999999999999999999999998543
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.8e-34 Score=258.51 Aligned_cols=241 Identities=11% Similarity=0.043 Sum_probs=174.6
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC--------CCCEEEEEeCCCcEEEE
Q 016257 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--------DGSRFAAGGVDGHLRIM 139 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--------~~~~l~~~~~dg~i~i~ 139 (392)
...+++++.+|++++.|++|+|||...++....... .....|.+.|++++|+| |+++|++++.|++|++|
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~--~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVL--GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEE--CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeee--cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE
Confidence 333445566899999999999999998764332221 12235889999999998 78999999999999999
Q ss_pred eCCCCceeecccCCCCcEEEEEecCCCC-eEEEEcCCCcEEEEECCCCeeeEEEe------------------------c
Q 016257 140 HWPSLRIILDEPKAHKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLT------------------------R 194 (392)
Q Consensus 140 d~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~------------------------~ 194 (392)
|++++.+......|+..+.+++|+|++. +|++++.|++|++||+++++...... .
T Consensus 172 d~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 172 RLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp EEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred ECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 9998888888888999999999999874 79999999999999998876543321 1
Q ss_pred CCCcceEEEEec-CCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEE------------------EECC-
Q 016257 195 NSDEKIELCRFS-KDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVL------------------SISL- 254 (392)
Q Consensus 195 ~~~~~v~~~~~~-~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~------------------~~s~- 254 (392)
.+...+.++.|+ |++.. +++++.|+.+++||+..++....+..+...+..+ .++|
T Consensus 252 ~~~~~v~~v~~~~~dg~~-----l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSG-----ILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp CCSSSCSEEEEETTTTCE-----EEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred cccccceeeeeecCCCCE-----EEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 233467788886 78886 7899999999999998876555444443333332 2333
Q ss_pred -CCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 255 -DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 255 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
++.++++|+.||.|++||+.+++..... ..| ..+|.+++|+|||++||+++.+ .+.+|++.
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~-~~~-~~~V~svafspdG~~LA~as~~-Gv~lvrL~ 388 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIP-IQL-GMPIVDFCWHQDGSHLAIATEG-SVLLTRLM 388 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEE-EEC-SSCEEEEEECTTSSEEEEEESS-EEEEEEEG
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEe-cCC-CCcEEEEEEcCCCCEEEEEeCC-CeEEEEEe
Confidence 3446778889999999999998877665 456 7899999999999999999876 57777664
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=238.64 Aligned_cols=271 Identities=11% Similarity=0.089 Sum_probs=214.7
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc
Q 016257 66 PMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR 145 (392)
Q Consensus 66 v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 145 (392)
.++|+||+++ +||+| .|++|+|||+.+++....+... .|...|.+++|+|++++|++|+.||+|++||+++++
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~-----~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQME-----QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECC-----STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEec-----CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 5789999886 77765 5899999999988765544322 367889999999999999999999999999999999
Q ss_pred eeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccE
Q 016257 146 IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (392)
Q Consensus 146 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~ 225 (392)
.+.....|...+.++.+ ++..+++++.++.+++|+.............+...+..+.+++++.. +++++.|+.
T Consensus 101 ~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~s~~~d~~ 173 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-----LASGGNDNL 173 (318)
T ss_dssp EEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE-----EEEEETTSC
T ss_pred eEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE-----EEEEecCcc
Confidence 98888888777776555 46799999999999999998765544333444558999999999997 789999999
Q ss_pred EEEEeCCCcee----eeeecccCCCcEEEEECCCCCE---EEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEee
Q 016257 226 LAVYDISTWNK----IGHKRLLRKPASVLSISLDGKY---LAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP 298 (392)
Q Consensus 226 i~v~d~~~~~~----~~~~~~~~~~v~~~~~s~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 298 (392)
|++||+++++. ......+...+.+++++|++.. +++++.++.|++||.......... .+ ...+..+.|+|
T Consensus 174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~--~~-~~~v~~~~~~~ 250 (318)
T 4ggc_A 174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV--DA-HSQVCSILWSP 250 (318)
T ss_dssp EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE--EC-SSCEEEEEEET
T ss_pred eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc--cc-eeeeeeeeecc
Confidence 99999987653 2344556778999999997653 345678899999999988876654 34 67899999999
Q ss_pred CCCeEEEEe--CCCeEEEEEeecCccccce--------eeeeeeeeeeeeceEEEEeeecceeeeecccc
Q 016257 299 TQRVVLTAS--KEWGAMITKLTVPADWKEW--------QIYSLLLALFLASAVVFYIFFENSDSFWNFPV 358 (392)
Q Consensus 299 ~~~~l~~~~--~dg~i~iw~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~ 358 (392)
++..+++++ .|+.|++|++......... .+.+.+ ....+++++.|++|++||+..
T Consensus 251 ~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp-----dg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 251 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-----DGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-----TSSCEEEEETTTEEEEECCSC
T ss_pred cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-----CCCEEEEEecCCeEEEEECCC
Confidence 999887765 7999999999865443322 222222 344678888999999999864
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-33 Score=254.16 Aligned_cols=246 Identities=9% Similarity=-0.051 Sum_probs=200.9
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCc---cceeeccccC----------------------------------
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGA---TDINLLAKKM---------------------------------- 106 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~---------------------------------- 106 (392)
.++.+++|+|+|++|+++ .++.|++||+.+++ ..........
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578999999999966665 57789999999887 3222211000
Q ss_pred -------------CCCCCCCCeEEEEecCCCCEE-EEEeCCCcEEEEeCC--CCceeeccc--CCCCcEEEEEecCCCCe
Q 016257 107 -------------PPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLRIMHWP--SLRIILDEP--KAHKSVLDMDFSLDSEF 168 (392)
Q Consensus 107 -------------~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~--~~~~~~~~~--~~~~~i~~i~~~~~~~~ 168 (392)
....|.+.|.+++|+|++++| ++++.||.|++||+. +++....+. .+...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 001244579999999999996 889999999999998 777766554 44568999999999999
Q ss_pred EEEEcCCCcEEEEECCCCeeeE----EEecCCCcceEEEEecCC---CCcceEEEEEEeCCccEEEEEeCCCceeeee-e
Q 016257 169 LATTSTDGSARIWKTEDGVAWT----FLTRNSDEKIELCRFSKD---GTKPFLFCTVQRGDKALLAVYDISTWNKIGH-K 240 (392)
Q Consensus 169 l~~~~~d~~i~vwd~~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-~ 240 (392)
|++++.++.+++|++.+++... .+..+ ...|.+++|+|+ +.. +++++.|+.|++||+++++.+.. +
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~-----l~s~~~d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGH-VSMLTDVHLIKDSDGHQF-----IITSDRDEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEEC-SSCEEEEEEEECTTSCEE-----EEEEETTSCEEEEEESCTTCEEEEC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecc-cCceEEEEEcCCCCCCcE-----EEEEcCCCcEEEEECCCCceeeeee
Confidence 9999999999999998876543 45544 458999999999 765 78999999999999999887766 5
Q ss_pred cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecc-----------------------ccCcceEEEEEe
Q 016257 241 RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL-----------------------HLGTSIALVEFC 297 (392)
Q Consensus 241 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----------------------~~~~~i~~~~~s 297 (392)
..|...|.+++|+ ++++|++++.|+.|++||+++++.+..+... .....|.+++|+
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 5789999999999 9999999999999999999999877665311 113579999999
Q ss_pred eCCCeEEEEe-CCCeEEEEEe
Q 016257 298 PTQRVVLTAS-KEWGAMITKL 317 (392)
Q Consensus 298 ~~~~~l~~~~-~dg~i~iw~~ 317 (392)
|++++|++++ .|+.|++|++
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEEe
Confidence 9999999999 8999999999
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=249.67 Aligned_cols=284 Identities=15% Similarity=0.149 Sum_probs=215.1
Q ss_pred eEEEeeCCCCCeeEEEEcCC---CCeEEEEeCCCeEEEEEEeC-CccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE
Q 016257 55 VTYVFDESEGDPMTIAVNPS---GDDFVCSTTNGGCKLFEVYG-GATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG 130 (392)
Q Consensus 55 ~~~~~~~h~~~v~~~~~sp~---~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 130 (392)
....+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ +........ .|...|.+++|+|++++|+++
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ------MHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE------ECSSCEEEEEECTTSSEEEEE
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec------cccCCEEEEEECcCCCEEEEE
Confidence 44567899999999999999 59999999999999999987 332212221 277899999999999999999
Q ss_pred eCCCcEEEEeCCCCceeecccCCCCcEEEEEe--cCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCC
Q 016257 131 GVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF--SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKD 208 (392)
Q Consensus 131 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 208 (392)
+.||.|++||+++++... ...|...|.+++| +|++++|++++.|+.|++||+++++.+..+..+. .+.++.+.++
T Consensus 105 ~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~ 181 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE--RCYCADVIYP 181 (368)
T ss_dssp ETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS--CEEEEEEETT
T ss_pred cCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC--CceEEEecCC
Confidence 999999999999887664 5667789999999 8999999999999999999999999888887553 5667776654
Q ss_pred CCcceEEEEEEeCCccEEEEEeCCCceeeeee--cccCCCcEEEEECCCCCE----EEEEeCCCcEEEEecCCce---ee
Q 016257 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGHK--RLLRKPASVLSISLDGKY----LAMGSKDGDICVVDVKKME---IN 279 (392)
Q Consensus 209 ~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~----l~~~~~dg~i~iwd~~~~~---~~ 279 (392)
. ++.++.++.+.+||++........ ........++++.++... +++++.||.|++||++... ..
T Consensus 182 --~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~ 254 (368)
T 3mmy_A 182 --M-----AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254 (368)
T ss_dssp --E-----EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS
T ss_pred --e-----eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc
Confidence 3 577778999999999876443222 223456677777665544 9999999999999998863 33
Q ss_pred eeeeccccCc------------ceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee---eeeeeeeeeeceEEEE
Q 016257 280 HWSKRLHLGT------------SIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI---YSLLLALFLASAVVFY 344 (392)
Q Consensus 280 ~~~~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 344 (392)
..+ ..| .. .|++++|+|++++|++++.||.|++|++........... .............+++
T Consensus 255 ~~~-~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 255 FTF-KCH-RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAY 332 (368)
T ss_dssp EEE-ECS-EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEE
T ss_pred eee-eee-ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEE
Confidence 333 344 33 799999999999999999999999999986544322211 0111111123446677
Q ss_pred eeecceeeeecc
Q 016257 345 IFFENSDSFWNF 356 (392)
Q Consensus 345 ~~~d~~i~~W~~ 356 (392)
++.|+..+.|++
T Consensus 333 ~s~d~~~~~~~~ 344 (368)
T 3mmy_A 333 ASSYDWSKGHEF 344 (368)
T ss_dssp EECCCSTTCGGG
T ss_pred Eecccccccccc
Confidence 776765444443
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.2e-32 Score=243.22 Aligned_cols=282 Identities=12% Similarity=0.095 Sum_probs=211.5
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeE-EEEe
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDF-VCST 82 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~~~~ 82 (392)
..+|+|++|+|++. ++++|+. +.+++|..++. ...... +...+..+++.++++.+ ++++
T Consensus 19 ~~~V~~v~fs~dg~---~la~g~~-------~~~~iw~~~~~--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 19 SNPVTDYEFNQDQS---CLILSTL-------KSFEIYNVHPV--------AHIMSQ--EMRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp CCCCCEEEECTTSS---EEEEECS-------SEEEEEEETTE--------EEEEEE--ECSCCCEEEECTTSSEEEEECS
T ss_pred CCceEEEEECCCCC---EEEEEcC-------CEEEEEecCCc--------ceeeee--ecCCeEEEEEcCCCCEEEEEEC
Confidence 46899999999984 5665544 34789987632 112222 22358889999988877 4677
Q ss_pred CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceeecccCCCCcEEEEE
Q 016257 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL-RIILDEPKAHKSVLDMD 161 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~i~ 161 (392)
.|++|++||..+++....+. +...|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. +...++
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~--------~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~ 144 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIK--------VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCE 144 (355)
T ss_dssp STTEEEEEETTTTEEEEEEE--------CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEE
T ss_pred CccEEEEEECCCCcEEEEEE--------CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEE
Confidence 88999999998887554432 45689999998864 4444 3789999999987 55544433 444556
Q ss_pred ecCCCCeEEE--EcCCCcEEEEECCCCe---------------e-eEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc
Q 016257 162 FSLDSEFLAT--TSTDGSARIWKTEDGV---------------A-WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (392)
Q Consensus 162 ~~~~~~~l~~--~~~d~~i~vwd~~~~~---------------~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d 223 (392)
+++ .++++ ++.||.|++||+++++ + +..+..| ...|.+++|+|++.. +++++.|
T Consensus 145 ~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~~~v~~~~~s~~g~~-----l~s~s~d 216 (355)
T 3vu4_A 145 FSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-TNPIKMVRLNRKSDM-----VATCSQD 216 (355)
T ss_dssp EET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCC-SSCEEEEEECTTSSE-----EEEEETT
T ss_pred EEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc-CCceEEEEECCCCCE-----EEEEeCC
Confidence 676 56666 5889999999998765 1 4556554 558999999999997 8999999
Q ss_pred cE-EEEEeCCCceeeeeec-c-cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeee-------------------
Q 016257 224 AL-LAVYDISTWNKIGHKR-L-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHW------------------- 281 (392)
Q Consensus 224 ~~-i~v~d~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~------------------- 281 (392)
++ |++||+++++.+..+. + |...|.+++|+|++++|++++.|++|++||++.......
T Consensus 217 ~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 217 GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 98 9999999999988887 4 899999999999999999999999999999976532110
Q ss_pred ---eeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceee
Q 016257 282 ---SKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQI 328 (392)
Q Consensus 282 ---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 328 (392)
+...+ ......++|+++++.|++++.||.+++|++......+.+..
T Consensus 297 ~~~~~~~~-~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~~~~~~ 345 (355)
T 3vu4_A 297 NFKLSVDK-HVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEMERWLI 345 (355)
T ss_dssp EEECCCCT-TCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTTTEEEE
T ss_pred EEEeccCC-CCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCCceEEE
Confidence 00011 22346799999999999999999999999987766555443
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.5e-32 Score=249.65 Aligned_cols=285 Identities=12% Similarity=0.110 Sum_probs=225.3
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
+..+.+++|+|++ .++++++. ++.|.+|+.+... .. .......+.+|.+.|.+++|+|+++++++++.
T Consensus 122 ~~~~~~~~~s~~~---~~~~~~~~------~~~i~~~d~~~g~--~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~ 189 (433)
T 3bws_A 122 GFQPKSVRFIDNT---RLAIPLLE------DEGMDVLDINSGQ--TV-RLSPPEKYKKKLGFVETISIPEHNELWVSQMQ 189 (433)
T ss_dssp SSCBCCCEESSSS---EEEEEBTT------SSSEEEEETTTCC--EE-EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG
T ss_pred CCCceEEEEeCCC---eEEEEeCC------CCeEEEEECCCCe--Ee-eecCcccccccCCceeEEEEcCCCEEEEEECC
Confidence 3456789999944 45555444 4568888765321 10 00000135689999999999999999999999
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE-eCCCcEEEEeCCCCceeecccCCCCcEEEEEe
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~ 162 (392)
|+.|++||+.+++....+. .|...+.+++|+|++++++++ +.|+.|++||+++++....+.. ...+.+++|
T Consensus 190 d~~v~~~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~ 261 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKATVD-------LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLL 261 (433)
T ss_dssp GTEEEEEETTTCCEEEEEE-------CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEE
T ss_pred CCEEEEEECCCceEEEEEc-------CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEE
Confidence 9999999998776554443 256789999999999988554 4799999999999887665544 456999999
Q ss_pred cCCCCeEEEEc--------CCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCc
Q 016257 163 SLDSEFLATTS--------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234 (392)
Q Consensus 163 ~~~~~~l~~~~--------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~ 234 (392)
+|+++++++++ .|+.|++||+++++....+.. ...+.+++|+|+++.+ +++++.++.|++||++++
T Consensus 262 ~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l----~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 262 SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKI----YVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEE----EEEETTTTEEEEEETTTT
T ss_pred cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEE----EEEecCCCEEEEEECCCC
Confidence 99999999887 488999999999887776642 2368899999999862 467789999999999998
Q ss_pred eeeeeecccCCCcEEEEECCCCCEEEEEeC---------------CCcEEEEecCCceeeeeeeccccCcceEEEEEeeC
Q 016257 235 NKIGHKRLLRKPASVLSISLDGKYLAMGSK---------------DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPT 299 (392)
Q Consensus 235 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 299 (392)
+.+..+. +...+.+++|+|+|+++++++. ||.|++||+.+++....+.. ...+.+++|+|+
T Consensus 336 ~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~d 411 (433)
T 3bws_A 336 KVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---GNQPTGLDVSPD 411 (433)
T ss_dssp EEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---SSSEEEEEECTT
T ss_pred cEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---CCCCceEEEcCC
Confidence 8776665 5678999999999999988876 57999999999998877643 457999999999
Q ss_pred CCeEEEEeC-CCeEEEEEee
Q 016257 300 QRVVLTASK-EWGAMITKLT 318 (392)
Q Consensus 300 ~~~l~~~~~-dg~i~iw~~~ 318 (392)
|++|++++. |+.|++|+++
T Consensus 412 g~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 412 NRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SCEEEEEETTTTEEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEec
Confidence 999988875 9999999986
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.8e-31 Score=239.17 Aligned_cols=261 Identities=15% Similarity=0.157 Sum_probs=211.1
Q ss_pred cCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeE-EEEeCCCeEEEEEEeCCccceeeccccCCCCCCC
Q 016257 34 PSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDF-VCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDA 112 (392)
Q Consensus 34 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 112 (392)
++.|++|+++ .......+.+|. .+.+++|+|++++| ++++.++.|++||+.+++....+. +.
T Consensus 11 d~~v~v~d~~--------~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--------~~ 73 (391)
T 1l0q_A 11 SDNISVIDVT--------SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--------AG 73 (391)
T ss_dssp TTEEEEEETT--------TTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--------CS
T ss_pred CCEEEEEECC--------CCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--------CC
Confidence 6778898876 334445566664 58999999999977 566789999999998877544432 23
Q ss_pred CCeEEEEecCCCCEEEEE-eCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeE-EEEcCCCcEEEEECCCCeeeE
Q 016257 113 GPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFL-ATTSTDGSARIWKTEDGVAWT 190 (392)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~~ 190 (392)
..+.+++|+|++++|+++ +.++.|++||+++++....+. ++..+.+++|+|+++.+ ++++.|+.|++||+++++...
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 489999999999988654 467999999999988765554 45578999999999977 688889999999999999888
Q ss_pred EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe---CCCc
Q 016257 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS---KDGD 267 (392)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~ 267 (392)
.+..+. .+..++|+|+++.+ +++++.++.|++||+++++....+. +...+.+++|+|++++|++++ .++.
T Consensus 153 ~~~~~~--~~~~~~~~~dg~~l----~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 153 TVSVGR--SPKGIAVTPDGTKV----YVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNT 225 (391)
T ss_dssp EEECCS--SEEEEEECTTSSEE----EEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCE
T ss_pred EEecCC--CcceEEECCCCCEE----EEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCc
Confidence 876543 57999999999862 3677889999999999988776655 356789999999999999888 6899
Q ss_pred EEEEecCCceeeeeeeccccCcceEEEEEeeCCCeE-EEEeCCCeEEEEEeecCcc
Q 016257 268 ICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVV-LTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 268 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~ 322 (392)
|++||+++++....+. .+ ..+.+++|+|++++| ++++.|+.|++|++...+.
T Consensus 226 v~~~d~~~~~~~~~~~-~~--~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 226 VSMIDTGTNKITARIP-VG--PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEEEETTTTEEEEEEE-CC--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEECCCCeEEEEEe-cC--CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 9999999998877664 33 458999999999977 6778899999999876543
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-34 Score=249.54 Aligned_cols=275 Identities=12% Similarity=0.026 Sum_probs=203.8
Q ss_pred ecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEE
Q 016257 10 GSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKL 89 (392)
Q Consensus 10 ~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~i 89 (392)
.++.+++ .++++|+. |+.|++|+++.. .....+. ...|.++.|+|+ +++++.|++|++
T Consensus 42 ~~~~~d~---~~l~sg~~------Dg~v~iwd~~~~--------~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~ 99 (343)
T 3lrv_A 42 KSMYYDK---WVCMCRCE------DGALHFTQLKDS--------KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLL 99 (343)
T ss_dssp SSSSEEE---EEEEEEEE------TTEEEEEEESSS--------SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEE
T ss_pred hhhcCCC---CEEEEECC------CCcEEEEECCCC--------cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEE
Confidence 3444444 45666555 778999999733 2222233 467888899988 999999999999
Q ss_pred EEEeCCccceeecccc---CCCCCCCCCeEEEEecC--CCCEEEEEeCCCcEEEEeCCCCceeecccCCC-CcEEEEEec
Q 016257 90 FEVYGGATDINLLAKK---MPPLQDAGPQKCLSFSV--DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAH-KSVLDMDFS 163 (392)
Q Consensus 90 w~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~i~~~ 163 (392)
|+.............. .....|.+.|.+++|+| ++++|++++.||+|++||+++++.......++ ..+.+++|+
T Consensus 100 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~ 179 (343)
T 3lrv_A 100 LYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH 179 (343)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC
T ss_pred EEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC
Confidence 9865322111110000 01123567899999999 99999999999999999999988865554443 479999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeee-EEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAW-TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~ 242 (392)
|++.+|++|+.||.|++||+++++.. ..+...|...|.+++|+|++.. +++++ ++.|++||+++.+.+..+..
T Consensus 180 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~-----l~s~~-~~~v~iwd~~~~~~~~~~~~ 253 (343)
T 3lrv_A 180 KDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYW-----MVVEC-DQTVVCFDLRKDVGTLAYPT 253 (343)
T ss_dssp TTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSE-----EEEEE-SSBEEEEETTSSTTCBSSCC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCE-----EEEEe-CCeEEEEEcCCCCcceeecc
Confidence 99999999999999999999999887 7777635668999999999986 67777 44999999998876554443
Q ss_pred ---cCCCc--EEEEECCCCCEEEEEeC-CCcEEEEecCCceeeeeeeccccCcceEEEEEee---CCCeEEEEeCCCeEE
Q 016257 243 ---LRKPA--SVLSISLDGKYLAMGSK-DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP---TQRVVLTASKEWGAM 313 (392)
Q Consensus 243 ---~~~~v--~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~ 313 (392)
+...+ .+++|+|+|++|++++. |+.|++|++.+...... ..++..+.|.+ +.+.+++++.||.+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~d~~~~ 327 (343)
T 3lrv_A 254 YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT------KDEESALCLQSDTADFTDMDVVCGDGGIA 327 (343)
T ss_dssp CBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE------EEEEEECCC----CCCCEEEEEEETTEEE
T ss_pred cccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE------ecCceeEecCccccccceeEEEecCCceE
Confidence 22333 46999999999999998 99999999976543221 24677888988 888999999999998
Q ss_pred EEEee
Q 016257 314 ITKLT 318 (392)
Q Consensus 314 iw~~~ 318 (392)
++-..
T Consensus 328 ~~~~~ 332 (343)
T 3lrv_A 328 AILKT 332 (343)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 87543
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=7.7e-32 Score=244.91 Aligned_cols=335 Identities=8% Similarity=0.009 Sum_probs=243.9
Q ss_pred Cceeeeec---CCCCCcceeEEEeCCCCC------CCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCC
Q 016257 4 GGTVTCGS---WIKRPENVNLVVLGKSSR------ASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS 74 (392)
Q Consensus 4 ~~~v~~~~---w~~~~~~~~~~~~g~~~~------~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 74 (392)
...++.++ |+|+... .+++...... ....++.+.+|.++..+... .....+..+ ..+.+++|+|+
T Consensus 60 ~~g~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~~~~~~~~-~~~~~~~~s~~ 133 (433)
T 3bws_A 60 NIALVEMAIPVYKDEKEI-ELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITH----RFISRFKTG-FQPKSVRFIDN 133 (433)
T ss_dssp TEEEEEEEEECCCTTCCE-EEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSE----EEEEEEECS-SCBCCCEESSS
T ss_pred CCccEEEEEeeccCCCcE-EEEEEccccCcceeeecccCCCceEEEEECCCCCcc----eEEEEEcCC-CCceEEEEeCC
Confidence 34567788 9998654 3333322211 12234556788887643221 222334443 45679999997
Q ss_pred CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCC
Q 016257 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAH 154 (392)
Q Consensus 75 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 154 (392)
+.++++++.++.|++||+.+++......... ...|...+.+++|+++++++++++.|+.|++||+++++....+..+.
T Consensus 134 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 134 TRLAIPLLEDEGMDVLDINSGQTVRLSPPEK--YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp SEEEEEBTTSSSEEEEETTTCCEEEECCCHH--HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS
T ss_pred CeEEEEeCCCCeEEEEECCCCeEeeecCccc--ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC
Confidence 7778888888999999998876543221101 11367789999999999999999999999999999988887777777
Q ss_pred CcEEEEEecCCCCeEE-EEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeC--------CccE
Q 016257 155 KSVLDMDFSLDSEFLA-TTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG--------DKAL 225 (392)
Q Consensus 155 ~~i~~i~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--------~d~~ 225 (392)
..+.+++|+|+++.++ +++.|+.|++||+++++.+..+..+ ..+.+++|+|+++. +++++ .|+.
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~-----l~~~~~~~~~~~~~dg~ 284 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI--GLPRGLLLSKDGKE-----LYIAQFSASNQESGGGR 284 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC--SEEEEEEECTTSSE-----EEEEEEESCTTCSCCEE
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC--CCceEEEEcCCCCE-----EEEEECCCCccccCCCe
Confidence 7899999999999875 5558999999999999887777643 35899999999986 34444 5889
Q ss_pred EEEEeCCCceeeeeecccCCCcEEEEECCCCCEE-EEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEE
Q 016257 226 LAVYDISTWNKIGHKRLLRKPASVLSISLDGKYL-AMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVL 304 (392)
Q Consensus 226 i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 304 (392)
|++||+++++.+... .+...+.+++|+|+++.+ ++++.|+.|++||+.+++....+. + ...+.+++|+|+|++|+
T Consensus 285 i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~-~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 285 LGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP--V-FDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--C-SSSEEEEEECTTSSEEE
T ss_pred EEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--C-CCCCCeEEEcCCCCEEE
Confidence 999999988776554 345578899999999755 566889999999999998877663 4 67899999999999888
Q ss_pred EEeC---------------CCeEEEEEeecCccccceeeeeeeeeeee--eceEEEEee-ecceeeeeccc
Q 016257 305 TASK---------------EWGAMITKLTVPADWKEWQIYSLLLALFL--ASAVVFYIF-FENSDSFWNFP 357 (392)
Q Consensus 305 ~~~~---------------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~d~~i~~W~~~ 357 (392)
+++. ||.|++|++...+..........+..... ....+++++ .|+.|++|++.
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 8876 57999999876544332221111222211 233555555 49999999975
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.1e-33 Score=252.24 Aligned_cols=261 Identities=13% Similarity=0.130 Sum_probs=206.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccc--cCCceEEEeeCCCCCeeEEEEcCCCC-eEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVY--TSPLVTYVFDESEGDPMTIAVNPSGD-DFVC 80 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~ 80 (392)
.++|++++|+|++. .++++|+. ++.|.+|.+........ ........+.+|...|++++|+|++. +|++
T Consensus 128 ~~~v~~l~~~p~~~--~~lat~~~------dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 128 EGEVNRARYMPQNA--CVIATKTP------SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp SSCCSEEEEETTEE--EEEEEECS------SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred CCcEEEEEECCCCC--cEEEEECC------CCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 46899999999743 35666555 56699999875321111 01334566889999999999999998 9999
Q ss_pred EeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC-CCCEEEEEeCCCcEEEEeCCCC---ceeecccCCCCc
Q 016257 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIMHWPSL---RIILDEPKAHKS 156 (392)
Q Consensus 81 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~ 156 (392)
|+.||.|++|++..................|...|.+++|+| ++.+|++++.|+.|++||++++ +....+..|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 999999999999874322111111111124778999999999 7789999999999999999876 455555677789
Q ss_pred EEEEEecCCCC-eEEEEcCCCcEEEEECCC-CeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC-
Q 016257 157 VLDMDFSLDSE-FLATTSTDGSARIWKTED-GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST- 233 (392)
Q Consensus 157 i~~i~~~~~~~-~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~- 233 (392)
|.+++|+|+++ +|++++.||.|++||+++ ..++..+..+ ...|.+++|+|++..+ +++++.|+.|++||++.
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h-~~~v~~i~~sp~~~~~----l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH-KDEIFQVQWSPHNETI----LASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC-SSCEEEEEECSSCTTE----EEEEETTSCCEEEEGGGT
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC-CCCEEEEEECCCCCCE----EEEEeCCCcEEEEeCCCC
Confidence 99999999887 688999999999999998 4566777655 4589999999999752 68888999999999987
Q ss_pred -------------ceeeeeecccCCCcEEEEECCCCC-EEEEEeCCCcEEEEecCCce
Q 016257 234 -------------WNKIGHKRLLRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKME 277 (392)
Q Consensus 234 -------------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~ 277 (392)
.+.+.....|...|++++|+|++. +|++++.||.|++|++....
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 245566677888999999999998 89999999999999997643
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.6e-32 Score=231.17 Aligned_cols=287 Identities=13% Similarity=0.088 Sum_probs=188.6
Q ss_pred eeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEE-eCCC
Q 016257 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCS-TTNG 85 (392)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~-~~d~ 85 (392)
+.++-|-..+.+...+++ ..+..+.+|..... . .-...+++.+|+.+|..+.+.||-.-|++. -.+=
T Consensus 42 ~~~~~~~~~~~~~~~~~~-------~~~~~v~lw~~~~~-~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 109 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIIT-------ACEDVVSLWKALDA-W----QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNL 109 (356)
T ss_dssp EEEEEEC----CEEEEEE-------EESSEEEEEEESSS-S----BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSS
T ss_pred EeeeeeccCCCCccEEEE-------eccceEEEcccCCC-c----cceeeEEEeccCceeEEEEEcCcccceeeeeeccc
Confidence 566777776544233332 23456889988732 1 225677889999999999999965433322 1111
Q ss_pred eE-EEEEEeCCcc----ceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe--CCCcEEEEeC-CCCceeecccCCCCcE
Q 016257 86 GC-KLFEVYGGAT----DINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG--VDGHLRIMHW-PSLRIILDEPKAHKSV 157 (392)
Q Consensus 86 ~i-~iw~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~-~~~~~~~~~~~~~~~i 157 (392)
.+ .++.+.-... ...+... .|...+..+ ++++++.+++ .|+.|++|++ .+++.+.....|...+
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~-----g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v 181 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKS-----GNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEE 181 (356)
T ss_dssp SEEEEEEECC------CCEEEEEE-----EEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSS
T ss_pred cccceEEEEECCCccccccEEEeC-----CCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCce
Confidence 11 1111110000 0000000 011123332 4555555533 4899999999 4577776677777788
Q ss_pred EEEEecC---CCCeEEEEcCCCcEEEEECCCCeeeEEEecCCC--cceEEEEecCCCCcceEE-------EEEEeCCccE
Q 016257 158 LDMDFSL---DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD--EKIELCRFSKDGTKPFLF-------CTVQRGDKAL 225 (392)
Q Consensus 158 ~~i~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~ 225 (392)
+.++|+| ++.+|++++.|++|+|||++++++++++..++. ..+.+++|+|++..+... .+++++.|++
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 8889988 779999999999999999999999999976542 357788999998752211 1367889999
Q ss_pred EEEEeCCCceeeeee-----cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCc-ceEEEEEeeC
Q 016257 226 LAVYDISTWNKIGHK-----RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGT-SIALVEFCPT 299 (392)
Q Consensus 226 i~v~d~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~i~~~~~s~~ 299 (392)
|++||..+++.+..+ .+|.....+..+ ++.++++++.|++|+|||+.+++.+..+ .+| .. .+..++|+||
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL-~gH-~~~vvs~vafSPD 337 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALL-PPV-SDQHWSFVKWSGT 337 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEE-CCC---CCCCEEEECSS
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEe-cCC-CCCeEEEEEECCC
Confidence 999999999876544 244444433333 4789999999999999999999998887 466 44 4556999999
Q ss_pred CCeEEEEeCCCeEEEEEe
Q 016257 300 QRVVLTASKEWGAMITKL 317 (392)
Q Consensus 300 ~~~l~~~~~dg~i~iw~~ 317 (392)
|++|++|+.|++|+||++
T Consensus 338 G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 338 DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECCCcEEEecC
Confidence 999999999999999986
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-33 Score=251.26 Aligned_cols=258 Identities=9% Similarity=-0.056 Sum_probs=195.1
Q ss_pred CCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEe
Q 016257 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMH 140 (392)
Q Consensus 61 ~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 140 (392)
+-...|.+++|+|||+++|+++.|++|+ |....+.. ..|...|.+++|+|+| .++.+.+|+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l----------~gh~~~v~~V~FsPdg-------~~~~~~~~~ 73 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI----------NCNSKNLFHVKEFPLE-------FENKLDFEL 73 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC----------SSBGGGTEEEEEECCC-------CCCTTTTSC
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccccee----------cCCCccEEEEEECCCC-------CcceEEEEe
Confidence 3457899999999999999999999999 64444321 1478899999999999 456555555
Q ss_pred CCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCC----cceEEEEecCCCCcceEEE
Q 016257 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD----EKIELCRFSKDGTKPFLFC 216 (392)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~ 216 (392)
.+.. ..... .+...|.+++|+|+|++||+++.||.|++||.+. .+..+. ++. ..+.+++|+|+|+.
T Consensus 74 ~~~~-~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~----- 143 (588)
T 2j04_A 74 AQQN-GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESS----- 143 (588)
T ss_dssp CCSS-CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSC-----
T ss_pred CCCc-eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCE-----
Confidence 4322 22222 3466899999999999999999999999999643 555555 432 24999999999998
Q ss_pred EEEeCCccEEEEEeCCCcee-------eeee----cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceee---eee
Q 016257 217 TVQRGDKALLAVYDISTWNK-------IGHK----RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEIN---HWS 282 (392)
Q Consensus 217 ~~~~~~d~~i~v~d~~~~~~-------~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~ 282 (392)
+++++.||+|++||+.+++. +..+ .+|...|.+++|+|+| +++++.|+.|++||+.+++.. ..+
T Consensus 144 LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 144 IVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp EEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred EEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeee
Confidence 89999999999999998752 3454 5667899999999999 888889999999999887742 334
Q ss_pred eccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcccc--------ceeeeeeeeeeeeeceEEEEeeecceeeee
Q 016257 283 KRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWK--------EWQIYSLLLALFLASAVVFYIFFENSDSFW 354 (392)
Q Consensus 283 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W 354 (392)
..+| ...|.+++|+ |+.|++++ ++.|++|++....... ++.+.+ ........+++++.+|+ ++|
T Consensus 222 ~~~h-~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~---~~s~d~~~La~a~edG~-klw 293 (588)
T 2j04_A 222 QNAS-RRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPL---NHEKESTILLMSNKTSY-KVL 293 (588)
T ss_dssp ECCC-SSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEE---TTCSSCEEEEECSSCEE-EEE
T ss_pred cccc-cCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEe---eeCCCCCEEEEEcCCCC-EEE
Confidence 3467 7899999999 68899887 6999999987544311 112211 00112235666667999 999
Q ss_pred ccc
Q 016257 355 NFP 357 (392)
Q Consensus 355 ~~~ 357 (392)
...
T Consensus 294 ~~d 296 (588)
T 2j04_A 294 LED 296 (588)
T ss_dssp ESS
T ss_pred eec
Confidence 975
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=266.06 Aligned_cols=248 Identities=11% Similarity=0.122 Sum_probs=202.7
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCC--CCeEEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPS--GDDFVCS 81 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~--~~~l~~~ 81 (392)
.++|++++|+|++.. +++|+. ++.|++|.++.. .......+.+|.+.|++++|+|+ +++|++|
T Consensus 9 ~~~V~~l~~s~dg~~---latg~~------dg~I~vwd~~~~------~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~ 73 (753)
T 3jro_A 9 NELIHDAVLDYYGKR---LATCSS------DKTIKIFEVEGE------THKLIDTLTGHEGPVWRVDWAHPKFGTILASC 73 (753)
T ss_dssp CCCEEEECCCSSSCC---EEEEET------TTEEEEEEEETT------EEEEEEEECCCSSCEEEEEECCTTSCSEEEEE
T ss_pred cceeEEEEECCCCCe---EEEEEC------CCcEEEEecCCC------CCccceeccCCcCceEEEEecCCCCCCEEEEE
Confidence 578999999999853 555444 677999998733 23455678899999999999988 9999999
Q ss_pred eCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC--CCEEEEEeCCCcEEEEeCCCCc--eeecccCCCCcE
Q 016257 82 TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLR--IILDEPKAHKSV 157 (392)
Q Consensus 82 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i 157 (392)
+.||.|++||+.+++....... ..|...|.+++|+|+ ++++++|+.||.|++||++++. .......|...|
T Consensus 74 s~Dg~I~vwd~~~~~~~~~~~~-----~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v 148 (753)
T 3jro_A 74 SYDGKVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 148 (753)
T ss_dssp ETTSCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCE
T ss_pred eCCCeEEEEECCCCcccccccc-----cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCce
Confidence 9999999999998752211111 137789999999999 9999999999999999998773 333455677799
Q ss_pred EEEEecC-------------CCCeEEEEcCCCcEEEEECCCC----eeeEEEecCCCcceEEEEecCC---CCcceEEEE
Q 016257 158 LDMDFSL-------------DSEFLATTSTDGSARIWKTEDG----VAWTFLTRNSDEKIELCRFSKD---GTKPFLFCT 217 (392)
Q Consensus 158 ~~i~~~~-------------~~~~l~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~ 217 (392)
.+++|+| +++++++++.||.|++||++++ .....+..| ...|.+++|+|+ +.. +
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~-----l 222 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSY-----L 222 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEE-----E
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC-CCcEEEEEeccCCCCCCE-----E
Confidence 9999999 5899999999999999999877 344445444 558999999999 665 7
Q ss_pred EEeCCccEEEEEeCCCce-----eeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCce
Q 016257 218 VQRGDKALLAVYDISTWN-----KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME 277 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 277 (392)
++++.|+.|++||+++++ .......+...+++++|+|+|++|++++.||.|++||+.++.
T Consensus 223 ~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 223 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 999999999999999864 333444577899999999999999999999999999998644
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.8e-30 Score=228.93 Aligned_cols=268 Identities=12% Similarity=0.076 Sum_probs=208.5
Q ss_pred CeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEE-EEEeCCCcEEEEeCCCCceeecccCCC
Q 016257 76 DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRF-AAGGVDGHLRIMHWPSLRIILDEPKAH 154 (392)
Q Consensus 76 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~ 154 (392)
..+++++.|+.|++||+.+++....+. +...+.+++|+|+++++ ++++.|+.|++||+.+++....+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~- 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIP--------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG- 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE--------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEee--------cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-
Confidence 367788899999999998876544432 23468999999999987 56668999999999998887665544
Q ss_pred CcEEEEEecCCCCeEE-EEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC
Q 016257 155 KSVLDMDFSLDSEFLA-TTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST 233 (392)
Q Consensus 155 ~~i~~i~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~ 233 (392)
..+.+++|+|++++|+ +++.++.|++||+++++.+..+..+. .+.+++|+|+++.+ +++++.++.|++||+++
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l----~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK--SPLGLALSPDGKKL----YVTNNGDKTVSVINTVT 147 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEE----EEEETTTTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC--CcceEEECCCCCEE----EEEeCCCCEEEEEECCC
Confidence 4899999999999875 45567999999999998888776443 58999999999862 36788899999999999
Q ss_pred ceeeeeecccCCCcEEEEECCCCCEE-EEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEe---CC
Q 016257 234 WNKIGHKRLLRKPASVLSISLDGKYL-AMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTAS---KE 309 (392)
Q Consensus 234 ~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d 309 (392)
++.+..+..+ ..+.+++|+|+++++ ++++.++.|++||+++++....+. + ...+.+++|+|++++|++++ .+
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~-~~~~~~~~~~~~g~~l~~~~~~~~~ 223 (391)
T 1l0q_A 148 KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--V-EAAPSGIAVNPEGTKAYVTNVDKYF 223 (391)
T ss_dssp TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--C-SSEEEEEEECTTSSEEEEEEECSSC
T ss_pred CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--c-CCCccceEECCCCCEEEEEecCcCC
Confidence 8887776654 457999999999887 567788999999999998877653 3 56889999999999998888 68
Q ss_pred CeEEEEEeecCccccceeeeeeeeeeee--eceEE-EEeeecceeeeecccccccc
Q 016257 310 WGAMITKLTVPADWKEWQIYSLLLALFL--ASAVV-FYIFFENSDSFWNFPVARNQ 362 (392)
Q Consensus 310 g~i~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~d~~i~~W~~~~~~~~ 362 (392)
+.|++|++..............+..... ....+ +++..|+.+++||+.+++.+
T Consensus 224 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 224 NTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp CEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 9999999986544332221111222222 22344 34467999999999887654
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2e-30 Score=232.21 Aligned_cols=233 Identities=9% Similarity=0.091 Sum_probs=167.2
Q ss_pred EEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC--------CCCeEEEEeCCCeEEEEEE
Q 016257 21 LVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP--------SGDDFVCSTTNGGCKLFEV 92 (392)
Q Consensus 21 ~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp--------~~~~l~~~~~d~~i~iw~~ 92 (392)
++++|+. |++|++|..+..... .......+.+|.+.|++++|+| |+++||+++.|++|+|||+
T Consensus 103 ~las~~~------d~~v~lw~~~~~~~~---~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 103 FLACVCQ------DNTVRLIITKNETII---TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp EEEEEET------TSCEEEEEEETTEEE---EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred EEEEEeC------CCcEEEEECCCCccc---eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 4555444 788999998743211 1122335789999999999998 7889999999999999999
Q ss_pred eCCccceeeccccCCCCCCCCCeEEEEecCCC-CEEEEEeCCCcEEEEeCCCCceeecc---------------------
Q 016257 93 YGGATDINLLAKKMPPLQDAGPQKCLSFSVDG-SRFAAGGVDGHLRIMHWPSLRIILDE--------------------- 150 (392)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~--------------------- 150 (392)
.+........ .|...+.+++|+|++ .+|++++.|++|++||+++++.....
T Consensus 174 ~~~~~~~~~~-------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 174 TDEGPILAGY-------PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp ETTEEEEEEE-------ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred CCCceeeeec-------CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 8876544443 267899999999987 47999999999999999877643221
Q ss_pred ----cCCCCcEEEEEec-CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEE------------------EEecC
Q 016257 151 ----PKAHKSVLDMDFS-LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIEL------------------CRFSK 207 (392)
Q Consensus 151 ----~~~~~~i~~i~~~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~------------------~~~~~ 207 (392)
..+...+.++.|+ |+++.|++++.|+++++||+..++....+..+.. .+.. ..|+|
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTM-KLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecC-ccccEEEccccccccccCcceeEEEcc
Confidence 2344578888886 7999999999999999999987766555443221 2222 23333
Q ss_pred CCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecC
Q 016257 208 DGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (392)
Q Consensus 208 ~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 274 (392)
..... ++++++.|+.|++||+.+++.......+..+|++++|+|||++||+++.+| +.+|.+.
T Consensus 326 ~~~~~---~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 326 RYMDY---FATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SCTTE---EEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCCE---EEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 32221 267889999999999999988888888889999999999999999999776 6677654
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=5.8e-30 Score=216.83 Aligned_cols=244 Identities=11% Similarity=0.018 Sum_probs=174.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEe-
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST- 82 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~- 82 (392)
..||..+.+.||..++..+++|.-. .+.++...+.++.+.+. . ...-.+|...|..+ ++++.+.+++
T Consensus 86 ~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~v~sla~spd~~~~~---~-~l~s~g~~~~v~~l---~~g~lv~ss~~ 153 (356)
T 2w18_A 86 EVPVLQIVPVPDVYNLVCVALGNLE-----IREIRALFCSSDDESEK---Q-VLLKSGNIKAVLGL---TKRRLVSSSGT 153 (356)
T ss_dssp SSCEEEECCCTTCCSCEEEEECSSS-----EEEEEEECC------CC---E-EEEEEEEEEEEEEE---TTTEEEEEESS
T ss_pred CceeEEEEEcCcccceeeeeecccc-----ccceEEEEECCCccccc---c-EEEeCCCeEEEEec---CCCcEEEeccc
Confidence 3489999999999888888888764 23355555554422221 1 11113455556554 5666666643
Q ss_pred -CCCeEEEEEEeC-CccceeeccccCCCCCCCCCeEEEEecC---CCCEEEEEeCCCcEEEEeCCCCceeecccCCCC--
Q 016257 83 -TNGGCKLFEVYG-GATDINLLAKKMPPLQDAGPQKCLSFSV---DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK-- 155 (392)
Q Consensus 83 -~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-- 155 (392)
.|+.|++|++.. ++...... .|...++.++|++ ++.+|++++.|++|+|||+++++.+..+..++.
T Consensus 154 g~d~~V~~~~~s~dG~~~~s~~-------~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v 226 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKENQF-------LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQ 226 (356)
T ss_dssp STTCEEEEEEECTTSCEEEEEE-------ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---
T ss_pred CCCCcEEEEEECCCCceeeeec-------cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcce
Confidence 599999999954 44333322 2567788999999 779999999999999999999999888876543
Q ss_pred -cEEEEEecCCCCeE------------EEEcCCCcEEEEECCCCeeeEEEe----cCCCcceEEEEecCCCCcceEEEEE
Q 016257 156 -SVLDMDFSLDSEFL------------ATTSTDGSARIWKTEDGVAWTFLT----RNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 156 -~i~~i~~~~~~~~l------------~~~~~d~~i~vwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
.+.+++|+|+++++ ++|+.|++|++||..+++.+..+. ..+...+.+..++ +.. ++
T Consensus 227 ~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~-----lA 299 (356)
T 2w18_A 227 ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHC-----AA 299 (356)
T ss_dssp CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTE-----EE
T ss_pred eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCE-----EE
Confidence 57788999999876 567889999999999998876652 1222223333332 443 68
Q ss_pred EeCCccEEEEEeCCCceeeeeecccCCCcE-EEEECCCCCEEEEEeCCCcEEEEec
Q 016257 219 QRGDKALLAVYDISTWNKIGHKRLLRKPAS-VLSISLDGKYLAMGSKDGDICVVDV 273 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~iwd~ 273 (392)
+++.|++|+|||+++++.+..+.+|...+. +++|+|||++|++|+.|++|+|||+
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 889999999999999999999988876554 6899999999999999999999996
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=3.4e-28 Score=225.63 Aligned_cols=318 Identities=9% Similarity=-0.006 Sum_probs=229.4
Q ss_pred cCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEE
Q 016257 11 SWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLF 90 (392)
Q Consensus 11 ~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw 90 (392)
+++|++ .+++++.. ++.|.+|+.+ .......+..+.. +..++|+|||++|++++.++.|.+|
T Consensus 144 ~~~p~~---~~~vs~~~------d~~V~v~D~~--------t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~ 205 (543)
T 1nir_A 144 DLDLPN---LFSVTLRD------AGQIALVDGD--------SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMI 205 (543)
T ss_dssp CCCGGG---EEEEEEGG------GTEEEEEETT--------TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEE
T ss_pred ccCCCC---EEEEEEcC------CCeEEEEECC--------CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEE
Confidence 477765 34554433 5678888654 3334455653333 8999999999999999999999999
Q ss_pred EE--eCCccceeeccccCCCCCCCCCeEEEEecC----CCCEEEEEeC-CCcEEEEeCCCCceeecccC----------C
Q 016257 91 EV--YGGATDINLLAKKMPPLQDAGPQKCLSFSV----DGSRFAAGGV-DGHLRIMHWPSLRIILDEPK----------A 153 (392)
Q Consensus 91 ~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~----------~ 153 (392)
|+ .+.+....+. +...+..++|+| ||++|++++. +++|.+||..+++.+..+.. |
T Consensus 206 D~~~~t~~~~~~i~--------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~ 277 (543)
T 1nir_A 206 DLWAKEPTKVAEIK--------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYH 277 (543)
T ss_dssp ETTSSSCEEEEEEE--------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEE
T ss_pred ECcCCCCcEEEEEe--------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccc
Confidence 99 6665443332 334679999999 9999999885 89999999999988766543 1
Q ss_pred CC-cEEEEEecCCCCe-EEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeC
Q 016257 154 HK-SVLDMDFSLDSEF-LATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI 231 (392)
Q Consensus 154 ~~-~i~~i~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~ 231 (392)
.. .+..+.++|++.. +++...+++|.+||..+.+.+..........+..++|+|+++++ ++++..++.|.+||.
T Consensus 278 ~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l----~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 278 PEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYF----MTAANNSNKVAVIDS 353 (543)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEE----EEEEGGGTEEEEEET
T ss_pred cCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEE----EEEecCCCeEEEEEC
Confidence 22 6889999997764 56677889999999988765442221234468899999999962 355667899999999
Q ss_pred CCceeeeeecc----cCCCcEEEEECCC-CCEEEEEe-CCCcEEEEecCC-------ceeeeeeeccccCcceEEEEEee
Q 016257 232 STWNKIGHKRL----LRKPASVLSISLD-GKYLAMGS-KDGDICVVDVKK-------MEINHWSKRLHLGTSIALVEFCP 298 (392)
Q Consensus 232 ~~~~~~~~~~~----~~~~v~~~~~s~~-~~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~i~~~~~s~ 298 (392)
++++.+..+.. |......+ ++|+ +..++++. .|++|.+||+.+ .+.++.+ ..| ...+..++++|
T Consensus 354 ~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l-~~~-g~~~~~v~~~p 430 (543)
T 1nir_A 354 KDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL-QGQ-GGGSLFIKTHP 430 (543)
T ss_dssp TTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-ECS-CSCCCCEECCT
T ss_pred CCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE-EcC-CCCceEEEcCC
Confidence 99988776654 43333333 4677 66666665 579999999998 7877777 466 67788999999
Q ss_pred CCCeEEEEe-------CCCeEEEEEeecCccc-c----------------ceeeeeeeeeeeeeceEEEEee-----ecc
Q 016257 299 TQRVVLTAS-------KEWGAMITKLTVPADW-K----------------EWQIYSLLLALFLASAVVFYIF-----FEN 349 (392)
Q Consensus 299 ~~~~l~~~~-------~dg~i~iw~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~-----~d~ 349 (392)
++++|++++ .+++|.+||+...... . +++..+.+.+ ..++.+. .++
T Consensus 431 dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g-----~~~~~s~~~~~~~~~ 505 (543)
T 1nir_A 431 KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRG-----DEVWFSVWNGKNDSS 505 (543)
T ss_dssp TCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSS-----SEEEEEEECCTTSCC
T ss_pred CCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCC-----CEEEEEeecCCCCCC
Confidence 999999987 2679999999865433 1 2233333332 2333332 379
Q ss_pred eeeeecccccccccCCC
Q 016257 350 SDSFWNFPVARNQHGGP 366 (392)
Q Consensus 350 ~i~~W~~~~~~~~~~~p 366 (392)
.|.+||..+++.....+
T Consensus 506 ~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 506 ALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp EEEEEETTTTEEEEEEC
T ss_pred eEEEEECCCceEEEeec
Confidence 99999999998765444
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=2.7e-28 Score=219.75 Aligned_cols=285 Identities=14% Similarity=0.082 Sum_probs=209.3
Q ss_pred eeeeecCCCCCcceeEEEeCCCCC-CCC-CcCceeEEEE--cCCCCccccCCceEEEeeCCCCCeeEEEEcC--------
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSR-ASS-SPSVLEIFSF--DPKTTSVYTSPLVTYVFDESEGDPMTIAVNP-------- 73 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~-~~~-~~~~i~i~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-------- 73 (392)
++....|.+.+.+ ++++|+-.. ..| .+..+++|++ ... .......+.+|...+..+++++
T Consensus 64 ~~~~~~w~~~g~~--~~~~g~~~~~~~G~~~~~i~lwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 135 (415)
T 2hqs_A 64 EVQPAAWSALGID--AVVVGQVTPNPDGSYNVAYQLVDTGGAPG------TVLAQNSYKVNKQWLRYAGHTASDEVFEKL 135 (415)
T ss_dssp GCCHHHHHTTTCC--EEEEEEEEECTTSCEEEEEEEEECSSSTT------CEEEEEEEEECGGGHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHhcCCC--EEEEEEEEECCCCeEEEEEEEEeCCCCCC------CEEeeeEEEcChhHHHHHHHHHHHHHHHHH
Confidence 6777889888765 555554211 011 2337888887 422 2233456888988888888775
Q ss_pred ------CCCeEEEEeCC------CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCC---cEEE
Q 016257 74 ------SGDDFVCSTTN------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG---HLRI 138 (392)
Q Consensus 74 ------~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~i 138 (392)
.+..++.++.+ +.|++||+.... ...+. .|...+.+++|+|||++|++++.++ .|++
T Consensus 136 ~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~-------~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~ 207 (415)
T 2hqs_A 136 TGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVH-------RSPQPLMSPAWSPDGSKLAYVTFESGRSALVI 207 (415)
T ss_dssp HSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEE-------EESSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEe-------CCCCcceeeEEcCCCCEEEEEEecCCCcEEEE
Confidence 25667666654 789999987543 23322 2567899999999999999999875 9999
Q ss_pred EeCCCCceeecccCCCCcEEEEEecCCCCeEE-EEcCCCc--EEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 139 MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLA-TTSTDGS--ARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~d~~--i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
||+++++.. .+..+...+.+++|+|||++|+ +++.++. |++||+++++. ..+..+ ...+.+++|+|+++.
T Consensus 208 ~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~-~~~~~~~~~spdg~~---- 280 (415)
T 2hqs_A 208 QTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG-RSNNTEPTWFPDSQN---- 280 (415)
T ss_dssp EETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC-SSCEEEEEECTTSSE----
T ss_pred EECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC-CCcccceEECCCCCE----
Confidence 999988775 4556667899999999999887 6666654 99999988765 444443 457999999999997
Q ss_pred EEEEeC-Ccc--EEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCC---CcEEEEecCCceeeeeeeccccCc
Q 016257 216 CTVQRG-DKA--LLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKD---GDICVVDVKKMEINHWSKRLHLGT 289 (392)
Q Consensus 216 ~~~~~~-~d~--~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~ 289 (392)
++.++ .++ .|.+||+.+++.. .+..+...+.+++|+|+|++|++++.+ ..|++||+.+++.... ..+ .
T Consensus 281 -l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l--~~~-~- 354 (415)
T 2hqs_A 281 -LAFTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL--SST-F- 354 (415)
T ss_dssp -EEEEECTTSSCEEEEEETTSSCCE-ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC--CCS-S-
T ss_pred -EEEEECCCCCcEEEEEECCCCCEE-EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe--cCC-C-
Confidence 34333 344 7888899887643 444556778899999999999988864 5799999999887543 233 3
Q ss_pred ceEEEEEeeCCCeEEEEeCCC---eEEEEEeec
Q 016257 290 SIALVEFCPTQRVVLTASKEW---GAMITKLTV 319 (392)
Q Consensus 290 ~i~~~~~s~~~~~l~~~~~dg---~i~iw~~~~ 319 (392)
.+.+++|+|+|++|++++.++ .|++|++..
T Consensus 355 ~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 355 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 899999999999999888776 788888763
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1.7e-26 Score=223.98 Aligned_cols=242 Identities=11% Similarity=0.028 Sum_probs=178.6
Q ss_pred CeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCc--cceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 016257 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGA--TDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 142 (392)
.|.+++|||||++|++++. +.|++||+.++. ....+ ..+...+..++|||||++|++++ ++.|++||+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l-------~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~ 180 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQL-------THGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLA 180 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBC-------CCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEc-------ccCCcccccccCCCCCCEEEEEe-CCcEEEEecC
Confidence 3889999999999999876 889999998762 11111 12456799999999999999987 5689999999
Q ss_pred CCceeecccCCCCc----------------EEEEEecCCCCeEEEEcCCC------------------------------
Q 016257 143 SLRIILDEPKAHKS----------------VLDMDFSLDSEFLATTSTDG------------------------------ 176 (392)
Q Consensus 143 ~~~~~~~~~~~~~~----------------i~~i~~~~~~~~l~~~~~d~------------------------------ 176 (392)
+++.......+... +..++|+|||++|++++.|+
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 88765444333322 47899999999999987665
Q ss_pred ---cEEEEECCC-CeeeEEEec-CCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCC----Cc
Q 016257 177 ---SARIWKTED-GVAWTFLTR-NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRK----PA 247 (392)
Q Consensus 177 ---~i~vwd~~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~----~v 247 (392)
.|++||+.+ ++....... .+...+..++| |||+.+++...-....+..|.+||+.+++....+..+.. .+
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 339 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLH 339 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcC
Confidence 788999988 765544322 24557899999 999973321111223578899999999887655554432 44
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEecC-CceeeeeeeccccCcceEEE-EEeeCCCeEEE-EeCCC--eEEEEEeec
Q 016257 248 SVLSISLDGKYLAMGSKDGDICVVDVK-KMEINHWSKRLHLGTSIALV-EFCPTQRVVLT-ASKEW--GAMITKLTV 319 (392)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~-~~~dg--~i~iw~~~~ 319 (392)
..++|+|||+++++++.||.++||.+. .++ ...+ ..+ ...+..+ .|+|+|+.|+. ++.++ .+++|++..
T Consensus 340 ~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l-~~~-~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 340 NSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL-THG-NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp SCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES-CCS-SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee-eec-ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 688999999999999999988888765 334 4433 345 6678777 59999997754 44555 899999975
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=3.6e-25 Score=194.36 Aligned_cols=268 Identities=11% Similarity=0.098 Sum_probs=187.9
Q ss_pred CcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC-CeEEEEEEe--CCccceeeccccCCCC
Q 016257 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN-GGCKLFEVY--GGATDINLLAKKMPPL 109 (392)
Q Consensus 33 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d-~~i~iw~~~--~~~~~~~~~~~~~~~~ 109 (392)
.++.|.+|.++..+ .. .. .....|...+.+++|+|++++|++++.+ +.|.+|++. +++... .....
T Consensus 13 ~~~~v~~~~~~~~~-~~----~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~---- 81 (343)
T 1ri6_A 13 ESQQIHVWNLNHEG-AL----TL-TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF-AAESA---- 81 (343)
T ss_dssp GGTEEEEEEECTTS-CE----EE-EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEE----
T ss_pred CCCeEEEEEECCCC-cE----EE-eeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceee-ccccc----
Confidence 36779999987422 11 11 2223467789999999999999988876 899999997 433211 11111
Q ss_pred CCCCCeEEEEecCCCCEEEEEeC-CCcEEEEeCCCC---ceeecccCCCCcEEEEEecCCCCeEEEEc-CCCcEEEEECC
Q 016257 110 QDAGPQKCLSFSVDGSRFAAGGV-DGHLRIMHWPSL---RIILDEPKAHKSVLDMDFSLDSEFLATTS-TDGSARIWKTE 184 (392)
Q Consensus 110 ~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~---~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~vwd~~ 184 (392)
....+..++|+|++++|++++. ++.|.+||+.++ +.... ......+.+++|+|+++++++++ .++.|++||+.
T Consensus 82 -~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 82 -LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV-VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp -CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE-ECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred -cCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccc-ccCCCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 1237789999999998877665 788999999432 33332 23344688999999999888776 88999999998
Q ss_pred C-CeeeE----EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC--cee--eeeec---cc---CCCcEE
Q 016257 185 D-GVAWT----FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST--WNK--IGHKR---LL---RKPASV 249 (392)
Q Consensus 185 ~-~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~--~~~--~~~~~---~~---~~~v~~ 249 (392)
+ ++... .+.......+..++|+|+++.+ ++++..++.|.+||++. ++. ..... .. ...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l----~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA----YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE----EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEE----EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 7 54432 2333334468899999999862 35566889999999953 322 11221 11 235668
Q ss_pred EEECCCCCEEEEEe-CCCcEEEEecC--Cc--eeeeeeeccccCcceEEEEEeeCCCeEEEEe-CCCeEEEEEeecC
Q 016257 250 LSISLDGKYLAMGS-KDGDICVVDVK--KM--EINHWSKRLHLGTSIALVEFCPTQRVVLTAS-KEWGAMITKLTVP 320 (392)
Q Consensus 250 ~~~s~~~~~l~~~~-~dg~i~iwd~~--~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~ 320 (392)
++|+|+|++|+++. .++.|.+||+. ++ +....+. . ...+..++|+|+|++|++++ .++.+.+|+++..
T Consensus 236 i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~-~--~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP-T--ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE-C--SSSCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred eEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec-C--CCccceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 99999999887554 78999999998 33 3333332 2 23488999999999888887 6899999988743
No 131
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=1.9e-26 Score=222.92 Aligned_cols=290 Identities=11% Similarity=0.050 Sum_probs=199.2
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCC---CeeEEEEcCCCCeEEE
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEG---DPMTIAVNPSGDDFVC 80 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~sp~~~~l~~ 80 (392)
..++.+++|+||++ +++. + .++.+.+|+.+. ......+.+|.. .|.+++|||||++|++
T Consensus 16 ~~~~~~~~~spdg~---~~~~-~------~dg~i~~~d~~~--------g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~ 77 (723)
T 1xfd_A 16 KIHDPEAKWISDTE---FIYR-E------QKGTVRLWNVET--------NTSTVLIEGKKIESLRAIRYEISPDREYALF 77 (723)
T ss_dssp CCCCCCCCBSSSSC---BCCC-C------SSSCEEEBCGGG--------CCCEEEECTTTTTTTTCSEEEECTTSSEEEE
T ss_pred cccccccEEcCCCc---EEEE-e------CCCCEEEEECCC--------CcEEEEeccccccccccceEEECCCCCEEEE
Confidence 34578999999985 3442 2 245677776652 223344566654 4999999999999999
Q ss_pred EeCC---------CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeeccc
Q 016257 81 STTN---------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEP 151 (392)
Q Consensus 81 ~~~d---------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 151 (392)
++.+ +.+.+||+.+++. ..+.. ...+...+..++|||||++|++++. +.|++||+.+++......
T Consensus 78 ~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~----~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 78 SYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDP----PEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp EESCCCCSSSCCCSEEEEEESSSCCC-EECCC----TTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC
T ss_pred EecCccceeecceeeEEEEECCCCce-EeccC----CccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec
Confidence 8764 7788999988764 22211 1123445889999999999999885 799999999887654444
Q ss_pred CCCCcE------------------EEEEecCCCCeEEEEcCCC----------------------------------cEE
Q 016257 152 KAHKSV------------------LDMDFSLDSEFLATTSTDG----------------------------------SAR 179 (392)
Q Consensus 152 ~~~~~i------------------~~i~~~~~~~~l~~~~~d~----------------------------------~i~ 179 (392)
.+...+ .+++|+|||++|++++.|+ .|+
T Consensus 152 ~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~ 231 (723)
T 1xfd_A 152 TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLH 231 (723)
T ss_dssp CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEE
T ss_pred CCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEE
Confidence 333323 7899999999999887543 799
Q ss_pred EEECCCCeeeEEEecC-----CCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc-cCCCc----EE
Q 016257 180 IWKTEDGVAWTFLTRN-----SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL-LRKPA----SV 249 (392)
Q Consensus 180 vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~v----~~ 249 (392)
+||+.+++....+..+ +...+..++|+|||+.++ .....+..+..|.+||+.+++....... +...+ ..
T Consensus 232 ~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~-~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 310 (723)
T 1xfd_A 232 VIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAV-TWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEE 310 (723)
T ss_dssp EEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEE-EEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCC
T ss_pred EEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEE-EEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCC
Confidence 9999888765555543 145789999999998521 1111123457899999998876654433 22333 37
Q ss_pred EEECCCCCEEEEE--eCCC------cEEEEe-cCCcee--eeeeeccccCcceEE-EEEeeCCCeEEEEeCC---CeEEE
Q 016257 250 LSISLDGKYLAMG--SKDG------DICVVD-VKKMEI--NHWSKRLHLGTSIAL-VEFCPTQRVVLTASKE---WGAMI 314 (392)
Q Consensus 250 ~~~s~~~~~l~~~--~~dg------~i~iwd-~~~~~~--~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~d---g~i~i 314 (392)
++|+|||+.|+.. ..++ .|.+|| ..+++. ...+..+ ...+.. ++|+|||+.|+..+.+ +.+++
T Consensus 311 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 388 (723)
T 1xfd_A 311 PVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG--DWDVTKILAYDEKGNKIYFLSTEDLPRRRQL 388 (723)
T ss_dssp CEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS--SSCEEEEEEEETTTTEEEEEESSSCTTCCEE
T ss_pred ceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC--CeEEEeeeEEcCCCCEEEEEEcCCCCcceEE
Confidence 8999999977754 4566 577777 344441 3333222 334444 6999999998766655 78999
Q ss_pred EEeecC
Q 016257 315 TKLTVP 320 (392)
Q Consensus 315 w~~~~~ 320 (392)
|++...
T Consensus 389 ~~~~~~ 394 (723)
T 1xfd_A 389 YSANTV 394 (723)
T ss_dssp EEECSS
T ss_pred EEEeCC
Confidence 998753
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=9.7e-26 Score=209.16 Aligned_cols=298 Identities=6% Similarity=0.021 Sum_probs=215.9
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC----CCCeEEE
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP----SGDDFVC 80 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp----~~~~l~~ 80 (392)
..+.+++|+|++.+ +.+++. ++.|.+|+++.. +......+. +...+..++|+| +|++|++
T Consensus 179 ~~~~~v~~spdg~~---l~v~~~------d~~V~v~D~~~~------t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v 242 (543)
T 1nir_A 179 YAVHISRMSASGRY---LLVIGR------DARIDMIDLWAK------EPTKVAEIK-IGIEARSVESSKFKGYEDRYTIA 242 (543)
T ss_dssp TTEEEEEECTTSCE---EEEEET------TSEEEEEETTSS------SCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEE
T ss_pred cccceEEECCCCCE---EEEECC------CCeEEEEECcCC------CCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEE
Confidence 34789999999865 333322 467888887422 223344555 355789999999 9999998
Q ss_pred EeC-CCeEEEEEEeCCccceeeccccCC----CCCCCCCeEEEEecCCCCE-EEEEeCCCcEEEEeCCCCceee-cccCC
Q 016257 81 STT-NGGCKLFEVYGGATDINLLAKKMP----PLQDAGPQKCLSFSVDGSR-FAAGGVDGHLRIMHWPSLRIIL-DEPKA 153 (392)
Q Consensus 81 ~~~-d~~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~i~d~~~~~~~~-~~~~~ 153 (392)
++. +++|.+||..+.+....+...... .......+..+.++|++.. +++...++.|.+||+.+.+.+. ....+
T Consensus 243 ~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 243 GAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp EEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC
T ss_pred EEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc
Confidence 884 899999999887765554321110 0112347899999997665 5566678999999998765433 12233
Q ss_pred CCcEEEEEecCCCCeEEEE-cCCCcEEEEECCCCeeeEEEecC---CCcceEEEEecCCCCcceEEEEEEeC-CccEEEE
Q 016257 154 HKSVLDMDFSLDSEFLATT-STDGSARIWKTEDGVAWTFLTRN---SDEKIELCRFSKDGTKPFLFCTVQRG-DKALLAV 228 (392)
Q Consensus 154 ~~~i~~i~~~~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~-~d~~i~v 228 (392)
...+.++.|+|++++++++ ..+++|.+||+++++.+..+... +......+ ++|++... ++++. .+++|.+
T Consensus 323 ~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~----~~s~~~~d~~V~v 397 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPV----WSTSHLGDGSISL 397 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEE----EEEEBSSSSEEEE
T ss_pred CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccE----EEeccCCCceEEE
Confidence 4467889999999977655 56889999999999998887642 22122222 47775541 35554 6899999
Q ss_pred EeCCC-------ceeeeeecccCCCcEEEEECCCCCEEEEEe-------CCCcEEEEecCCceee-eeee-------ccc
Q 016257 229 YDIST-------WNKIGHKRLLRKPASVLSISLDGKYLAMGS-------KDGDICVVDVKKMEIN-HWSK-------RLH 286 (392)
Q Consensus 229 ~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~iwd~~~~~~~-~~~~-------~~~ 286 (392)
||+.+ ++.++.+..+...+..++++|++++|++++ .+++|.+||+.+++.. ..+. ..+
T Consensus 398 ~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~ 477 (543)
T 1nir_A 398 IGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 477 (543)
T ss_dssp EECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS
T ss_pred EEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCC
Confidence 99998 888899998888888999999999999987 2679999999998866 3321 233
Q ss_pred cCcceEEEEEeeCCCeEEEEe-----CCCeEEEEEeecCcccc
Q 016257 287 LGTSIALVEFCPTQRVVLTAS-----KEWGAMITKLTVPADWK 324 (392)
Q Consensus 287 ~~~~i~~~~~s~~~~~l~~~~-----~dg~i~iw~~~~~~~~~ 324 (392)
...+..+.|+|+|+.++.+. .|+.|.|||..+.+..+
T Consensus 478 -~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 519 (543)
T 1nir_A 478 -AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKA 519 (543)
T ss_dssp -CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred -CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEE
Confidence 57899999999999888663 47999999998766543
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=4.2e-25 Score=193.14 Aligned_cols=264 Identities=8% Similarity=0.008 Sum_probs=186.3
Q ss_pred cCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC-CCeEEEEEEeCCcc-ceeeccccCCCCCC
Q 016257 34 PSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT-NGGCKLFEVYGGAT-DINLLAKKMPPLQD 111 (392)
Q Consensus 34 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~-d~~i~iw~~~~~~~-~~~~~~~~~~~~~~ 111 (392)
++.|.+|+.+ .......+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...... +
T Consensus 19 ~~~v~~~d~~--------~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~ 82 (331)
T 3u4y_A 19 LRRISFFSTD--------TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE-------G 82 (331)
T ss_dssp GTEEEEEETT--------TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE-------C
T ss_pred CCeEEEEeCc--------ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc-------C
Confidence 5667777765 223333444555667 9999999997776665 88999999988765 222221 2
Q ss_pred CCCeEEEEecCCCCEEEEEeCCC---cEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEE-cCCCc-EEEEECCCC
Q 016257 112 AGPQKCLSFSVDGSRFAAGGVDG---HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATT-STDGS-ARIWKTEDG 186 (392)
Q Consensus 112 ~~~v~~~~~s~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~-i~vwd~~~~ 186 (392)
..+..+++|+|+|++|+++..++ .|.+||+++++.+..+.. .....+++|+|+|++++++ ..++. +.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 33444499999999999655443 899999999887665443 3457899999999866655 45578 999998754
Q ss_pred eeeE----EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee---eeeecccCCCcEEEEECCCCCEE
Q 016257 187 VAWT----FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK---IGHKRLLRKPASVLSISLDGKYL 259 (392)
Q Consensus 187 ~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l 259 (392)
..+. ... ........++|+|+++.+ ++++..++.|.+||+++++. +..+.. ...+..++|+|+|+++
T Consensus 162 g~~~~~~~~~~-~~~~~~~~~~~spdg~~l----~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 162 GVLFDTGQEFI-SGGTRPFNITFTPDGNFA----FVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTV 235 (331)
T ss_dssp CCEEEEEEEEE-CSSSSEEEEEECTTSSEE----EEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEE
T ss_pred CcEeecCCccc-cCCCCccceEECCCCCEE----EEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEE
Confidence 3321 111 223357899999999862 45666789999999998887 555553 4567889999999987
Q ss_pred EEEe-CCCcEEEEecCCcee--eeeeecc---c--cCcceEEEEEeeCCCeEEEEeC-CCeEEEEEeecC
Q 016257 260 AMGS-KDGDICVVDVKKMEI--NHWSKRL---H--LGTSIALVEFCPTQRVVLTASK-EWGAMITKLTVP 320 (392)
Q Consensus 260 ~~~~-~dg~i~iwd~~~~~~--~~~~~~~---~--~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~ 320 (392)
++++ .++.|.+||+.+++. +..+... + .......++|+|+|++|++++. ++.|.+|++..+
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 7665 477899999999887 2222111 1 0122356899999998866554 679999999754
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.9e-26 Score=198.04 Aligned_cols=255 Identities=13% Similarity=0.006 Sum_probs=182.9
Q ss_pred CCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeC-CccceeeccccCCCCC
Q 016257 32 SSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYG-GATDINLLAKKMPPLQ 110 (392)
Q Consensus 32 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~ 110 (392)
+.++.|.+|+.+. ... ..+..|...|.+++|+|++++|++++ ++.|++||+.+ ++...... ..
T Consensus 19 ~~~~~i~~~d~~~--------~~~-~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~------~~ 82 (297)
T 2ojh_A 19 SMRSSIEIFNIRT--------RKM-RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT------GF 82 (297)
T ss_dssp CCCEEEEEEETTT--------TEE-EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC------TT
T ss_pred CcceeEEEEeCCC--------Cce-eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc------cc
Confidence 3567777777642 222 23455788999999999999999976 77899999988 65322211 11
Q ss_pred CCCCeEEEEecCCCCEEEEEe--CCCcEEEE--eCCCCceeecccCCCCcEEEEEecCCCCeEE-EEcCCCcEEEEECCC
Q 016257 111 DAGPQKCLSFSVDGSRFAAGG--VDGHLRIM--HWPSLRIILDEPKAHKSVLDMDFSLDSEFLA-TTSTDGSARIWKTED 185 (392)
Q Consensus 111 ~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~--d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~d~~i~vwd~~~ 185 (392)
+...+.+++|+|++++|++++ .++...+| +..+++. ..+ .....+..++|+|++++|+ +++.++.+++|+++.
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLM-TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EEC-CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEe-ecCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 236788999999999999998 33445555 5455443 223 3334588999999999877 677889999998642
Q ss_pred -CeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCC-CceeeeeecccCCCcEEEEECCCCCEEEEEe
Q 016257 186 -GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS-TWNKIGHKRLLRKPASVLSISLDGKYLAMGS 263 (392)
Q Consensus 186 -~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 263 (392)
......+.. +...+.+++|+|+++.+ ++++..++.+.+|+++ .+.....+..+...+..++|+|+|++|++++
T Consensus 161 ~~~~~~~~~~-~~~~~~~~~~s~dg~~l----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 161 DSGVETRLTH-GEGRNDGPDYSPDGRWI----YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp TTCCEEECCC-SSSCEEEEEECTTSSEE----EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEE
T ss_pred CCCcceEccc-CCCccccceECCCCCEE----EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEE
Confidence 223333433 34478999999999862 3344567888888876 4455556666677888999999999999888
Q ss_pred CC-----------CcEEEEecCCceeeeeee-ccccCcceEEEEEeeCCCeEEEEeCCC
Q 016257 264 KD-----------GDICVVDVKKMEINHWSK-RLHLGTSIALVEFCPTQRVVLTASKEW 310 (392)
Q Consensus 264 ~d-----------g~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg 310 (392)
.+ +.|++||+.+++...... ..| ...+..++|+|++++|++++.+.
T Consensus 236 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 236 YDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG-QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES-TTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCCCCCcccccCceEEEEEecCCCCceeeeccCCC-CcccccceECCCCCEEEEEEecc
Confidence 65 569999999876544332 255 67899999999999988887663
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=5.6e-25 Score=198.08 Aligned_cols=237 Identities=19% Similarity=0.176 Sum_probs=180.4
Q ss_pred CceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCC---eEEEEEEeCCccceeeccccCCCCCC
Q 016257 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG---GCKLFEVYGGATDINLLAKKMPPLQD 111 (392)
Q Consensus 35 ~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~ 111 (392)
+.|.+|+++ +.. ...+.+|.+.+.+++|+|+|++|++++.++ .|++||+.+++.. .+. .+
T Consensus 159 ~~i~i~d~~--g~~-------~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~-------~~ 221 (415)
T 2hqs_A 159 YELRVSDYD--GYN-------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA-------SF 221 (415)
T ss_dssp EEEEEEETT--SCS-------CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE-------CC
T ss_pred ceEEEEcCC--CCC-------CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee-------cC
Confidence 567777765 211 244667889999999999999999998875 8999999887643 221 24
Q ss_pred CCCeEEEEecCCCCEEE-EEeCCCc--EEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcC-CC--cEEEEECCC
Q 016257 112 AGPQKCLSFSVDGSRFA-AGGVDGH--LRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST-DG--SARIWKTED 185 (392)
Q Consensus 112 ~~~v~~~~~s~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~--~i~vwd~~~ 185 (392)
...+.+++|+|||++|+ +++.++. |++||+++++. ..+..+...+.+++|+|||++|++++. ++ .|++||+.+
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 56899999999999888 6666654 99999988776 456666678999999999999888775 44 677789887
Q ss_pred CeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCC---ccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEE
Q 016257 186 GVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD---KALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMG 262 (392)
Q Consensus 186 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 262 (392)
++. ..+..+ ...+..++|+|+++. ++.++. +..|.+||+.+++.. .+..+. .+.+++|+|+|++|+++
T Consensus 301 ~~~-~~l~~~-~~~~~~~~~spdG~~-----l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 301 GAP-QRITWE-GSQNQDADVSSDGKF-----MVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYS 371 (415)
T ss_dssp SCC-EECCCS-SSEEEEEEECTTSSE-----EEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEE
T ss_pred CCE-EEEecC-CCcccCeEECCCCCE-----EEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEE
Confidence 764 333333 347889999999997 333332 468999999987764 344443 89999999999999998
Q ss_pred eCCC---cEEEEecCCceeeeeeeccccCcceEEEEEeeCCC
Q 016257 263 SKDG---DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (392)
Q Consensus 263 ~~dg---~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 301 (392)
+.++ .|++||+.++.... + ..| .+.|.+++|+|...
T Consensus 372 s~~~~~~~l~~~d~~g~~~~~-l-~~~-~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 372 SSQGMGSVLNLVSTDGRFKAR-L-PAT-DGQVKFPAWSPYLH 410 (415)
T ss_dssp EEETTEEEEEEEETTSCCEEE-C-CCS-SSEEEEEEECCCCC
T ss_pred EcCCCccEEEEEECCCCcEEE-e-eCC-CCCCcCCccccccc
Confidence 8777 79999998655443 3 456 78999999999653
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=3.9e-26 Score=221.40 Aligned_cols=286 Identities=11% Similarity=0.077 Sum_probs=199.6
Q ss_pred CCCeeEEEEcCCCCeEEEEeC-CC-----eEEEEEEeCCccceeeccccCC-----------------CCCCCCCeEEEE
Q 016257 63 EGDPMTIAVNPSGDDFVCSTT-NG-----GCKLFEVYGGATDINLLAKKMP-----------------PLQDAGPQKCLS 119 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~-d~-----~i~iw~~~~~~~~~~~~~~~~~-----------------~~~~~~~v~~~~ 119 (392)
...+.+++|+|||++|++++. |+ .|++||+.+++........... .......+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999988 88 8999999887643333221100 000002378899
Q ss_pred ecCCCCEEEEEeCCCcEEEEeCCCCc--eeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCC
Q 016257 120 FSVDGSRFAAGGVDGHLRIMHWPSLR--IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD 197 (392)
Q Consensus 120 ~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 197 (392)
|||||++|++++. +.|++||+.+++ ....+..+...+..++|+|||++|++++. +.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCcc
Confidence 9999999999886 999999998873 34455666678999999999999998874 6899999988876544333221
Q ss_pred c---------------ceEEEEecCCCCcceEEEEEEeCCcc---------------------------------EEEEE
Q 016257 198 E---------------KIELCRFSKDGTKPFLFCTVQRGDKA---------------------------------LLAVY 229 (392)
Q Consensus 198 ~---------------~v~~~~~~~~~~~~~~~~~~~~~~d~---------------------------------~i~v~ 229 (392)
. .+..++|+|||+. ++.++.++ .|.+|
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-----l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSA-----IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSC-----EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred ceeccccceeeeeccccccceEECCCCCE-----EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 1 1477999999998 34443332 78999
Q ss_pred eCCC-ceeeeeec--ccCCCcEEEEECCCCCEEEEEeC-----CCcEEEEecCCceeeeeeeccccCc---ceEEEEEee
Q 016257 230 DIST-WNKIGHKR--LLRKPASVLSISLDGKYLAMGSK-----DGDICVVDVKKMEINHWSKRLHLGT---SIALVEFCP 298 (392)
Q Consensus 230 d~~~-~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~ 298 (392)
|+.+ ++...... .+...+..++| |||++|++++. +..|++||+.+++...... .+... .+..++|+|
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH-ETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE-EECSSCCCCCSCCEECT
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE-cCCCCcCCcCCceEECC
Confidence 9988 76544332 35667899999 99999997764 5679999999988766553 23122 456899999
Q ss_pred CCCeEEEEeCCCeEEEEEeecCccccc-----eeeeeeeeeeeeeceEEEE-eeecc--eeeeecccc
Q 016257 299 TQRVVLTASKEWGAMITKLTVPADWKE-----WQIYSLLLALFLASAVVFY-IFFEN--SDSFWNFPV 358 (392)
Q Consensus 299 ~~~~l~~~~~dg~i~iw~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~d~--~i~~W~~~~ 358 (392)
||+++++++.||.++||.++....... +.+. .+.........+++ +..++ .+++|++..
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVD-ELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEE-EEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEE-eEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 999999999999999998874322111 1110 00011112233433 33444 899999875
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=3.6e-24 Score=188.53 Aligned_cols=270 Identities=12% Similarity=0.123 Sum_probs=185.7
Q ss_pred CcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC---CCeEEEEEEeCCccceeeccccCCCC
Q 016257 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT---NGGCKLFEVYGGATDINLLAKKMPPL 109 (392)
Q Consensus 33 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~ 109 (392)
.+..+.+|.++..+..+. ......+...+..++|+|+|+ |++++. ++.|.+|++.+++........
T Consensus 14 ~~~~i~v~~~d~~tg~~~-----~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~----- 82 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLT-----NDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV----- 82 (347)
T ss_dssp SCCEEEEEEEETTTTEEE-----EEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE-----
T ss_pred CCCCEEEEEEcCCCCeEE-----EeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee-----
Confidence 356789999997654331 122334557788999999999 665554 588999999766532111100
Q ss_pred CCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCCC-Cce--eecccC---------CCCcEEEEEecCCCCeEEEEcCCC
Q 016257 110 QDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPS-LRI--ILDEPK---------AHKSVLDMDFSLDSEFLATTSTDG 176 (392)
Q Consensus 110 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~-~~~--~~~~~~---------~~~~i~~i~~~~~~~~l~~~~~d~ 176 (392)
.+...+..++|+|||++|++++ .++.+.+|++.. +.. +..... ....+.+++|+|+++++++...++
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 1345678999999999998887 678999999963 322 222111 112488999999999666667788
Q ss_pred cEEEEECC-CCeee--EEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC--cee--eeeecccC-----
Q 016257 177 SARIWKTE-DGVAW--TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST--WNK--IGHKRLLR----- 244 (392)
Q Consensus 177 ~i~vwd~~-~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~--~~~--~~~~~~~~----- 244 (392)
.|++|++. +++.. ..+.......+..++|+|+++.+ ++++..++.+.+|+++. ++. +.......
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l----~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYA----FLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEE----EEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEE----EEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 99999998 44432 22233333357889999999862 35567789999999874 432 22222222
Q ss_pred -CCcEEEEECCCCCEEEE-EeCCCcEEEEecCCc---eeeeeeeccccCcceEEEEEeeCCCeEEEEeCC-CeEEEEEee
Q 016257 245 -KPASVLSISLDGKYLAM-GSKDGDICVVDVKKM---EINHWSKRLHLGTSIALVEFCPTQRVVLTASKE-WGAMITKLT 318 (392)
Q Consensus 245 -~~v~~~~~s~~~~~l~~-~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~ 318 (392)
..+..++|+|||++|++ ...++.|.+|++... +....+ ..+ ...+..++|+|||++|++++.+ +.+.+|+++
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~-~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI-STE-GDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE-ECS-SSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE-ecC-CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 34788999999998754 456899999999732 333333 233 4568899999999988888764 899999886
Q ss_pred c
Q 016257 319 V 319 (392)
Q Consensus 319 ~ 319 (392)
.
T Consensus 317 ~ 317 (347)
T 3hfq_A 317 L 317 (347)
T ss_dssp T
T ss_pred C
Confidence 4
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=1.6e-24 Score=191.13 Aligned_cols=286 Identities=12% Similarity=0.097 Sum_probs=203.9
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEE-eC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCS-TT 83 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~-~~ 83 (392)
..+..++|+|++.++ +++..++. ....++.| +.++..+. .....+.. ...+..++|+|++++++++ ..
T Consensus 41 ~~~~~~~~s~dg~~l-~~~~~~~~-~~~~~~~v--~~~d~~~~------~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~ 109 (353)
T 3vgz_A 41 KGAYEMAYSQQENAL-WLATSQSR-KLDKGGVV--YRLDPVTL------EVTQAIHN-DLKPFGATINNTTQTLWFGNTV 109 (353)
T ss_dssp SSEEEEEEETTTTEE-EEEECCCT-TTEESEEE--EEECTTTC------CEEEEEEE-SSCCCSEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEE-EEEcCCCc-CCCCCccE--EEEcCCCC------eEEEEEec-CCCcceEEECCCCCEEEEEecC
Confidence 456789999998763 33322211 00113344 44554332 22223332 3458889999999966554 55
Q ss_pred CCeEEEEEEeCCccceeeccccCCC--CCCCCCeEEEEecCCCCEEEEEe--CCCcEEEEeCCCCceeecccCCCCcEEE
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPP--LQDAGPQKCLSFSVDGSRFAAGG--VDGHLRIMHWPSLRIILDEPKAHKSVLD 159 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 159 (392)
++.|.+||..+++....+....... ......+.+++|+|+++++++++ .++.|.+||.++++....+..+...+.+
T Consensus 110 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (353)
T 3vgz_A 110 NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTG 189 (353)
T ss_dssp TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCC
T ss_pred CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccce
Confidence 7899999998887554443211100 00111368899999999887776 4788999999998887666544456888
Q ss_pred EEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecC---CCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee
Q 016257 160 MDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRN---SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK 236 (392)
Q Consensus 160 i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~ 236 (392)
++|+|+++++++++.++.|.+||+.+++....+... ....+..++|+|+++.+ .++...++.|.+||..+++.
T Consensus 190 ~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l----~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 190 LALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRA----FITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp CEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEE----EEEESSSSEEEEEETTTCCE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEE----EEEeCCCCEEEEEECCCCcE
Confidence 999999999999999999999999999888777642 23357789999999963 34556679999999999888
Q ss_pred eeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCC
Q 016257 237 IGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEW 310 (392)
Q Consensus 237 ~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 310 (392)
+..+.... ...++|+|+|+++++++ .++.|.+||..+++....+.. ...+.+++|+|+|++|+.+..++
T Consensus 266 ~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 266 LAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCCCCEEEEEEccc
Confidence 76665433 25699999999766665 689999999999998877643 45789999999999777766553
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=7.1e-25 Score=211.37 Aligned_cols=287 Identities=13% Similarity=0.080 Sum_probs=200.8
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d 84 (392)
.+|.+++|+|| .. +++.. ++.+.+|+++ + ... ..+..+...+.+++|+|||+.|+++ .+
T Consensus 82 ~~v~~~~~spd-~~--~~~~~--------~~~i~~~d~~--~------~~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~ 140 (706)
T 2z3z_A 82 FPSFRTLDAGR-GL--VVLFT--------QGGLVGFDML--A------RKV-TYLFDTNEETASLDFSPVGDRVAYV-RN 140 (706)
T ss_dssp CCCEEEEETTT-TE--EEEEE--------TTEEEEEETT--T------TEE-EEEECCTTCCTTCEECTTSSEEEEE-ET
T ss_pred cCceeEEECCC-Ce--EEEEE--------CCEEEEEECC--C------Cce-EEccCCcccccCCcCCCCCCEEEEE-EC
Confidence 46999999999 44 33321 2456666654 2 111 2345567789999999999999985 67
Q ss_pred CeEEEEEEeC-----CccceeeccccCC-------CCCCCCCeEEEEecCCCCEEEEEe---------------------
Q 016257 85 GGCKLFEVYG-----GATDINLLAKKMP-------PLQDAGPQKCLSFSVDGSRFAAGG--------------------- 131 (392)
Q Consensus 85 ~~i~iw~~~~-----~~~~~~~~~~~~~-------~~~~~~~v~~~~~s~~~~~l~~~~--------------------- 131 (392)
+.|++|++.+ ++........... ..++...+.++.|||||++|++++
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 8999999987 5532211111000 000112358999999999999987
Q ss_pred ------------CCCcEEEEeCCCCceeeccc--CCCCcEEEEEecCCCCeEEEEcCCC-----cEEEEECCCCeeeEEE
Q 016257 132 ------------VDGHLRIMHWPSLRIILDEP--KAHKSVLDMDFSLDSEFLATTSTDG-----SARIWKTEDGVAWTFL 192 (392)
Q Consensus 132 ------------~dg~i~i~d~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~ 192 (392)
.+..|++||+++++...... .+...+.+++|+|||++|++++.++ .|++||+.+++....+
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 34679999999887654332 3445789999999999999887765 8999999988443333
Q ss_pred e-cCCCc---ceEEEEecC--CCCcceEEEEEEeCCccEEEEEeCC-CceeeeeecccCCCcEE-EEECCCCCEEEEEeC
Q 016257 193 T-RNSDE---KIELCRFSK--DGTKPFLFCTVQRGDKALLAVYDIS-TWNKIGHKRLLRKPASV-LSISLDGKYLAMGSK 264 (392)
Q Consensus 193 ~-~~~~~---~v~~~~~~~--~~~~~~~~~~~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~ 264 (392)
. ..... .+..++|+| +++. ++++..++.+.+|+++ .++.+..+..+...+.. ++|+|+|+.|+.++.
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~-----l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQF-----IWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEE-----EEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEES
T ss_pred EEccCCCeECccCCceeecCCCCEE-----EEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEec
Confidence 2 22221 246789999 9885 6777888888888776 55666666666777776 799999998876654
Q ss_pred C-C----cEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCC----CeEEEEEeecCc
Q 016257 265 D-G----DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKE----WGAMITKLTVPA 321 (392)
Q Consensus 265 d-g----~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~~ 321 (392)
+ + .|..||+.+++... + .+ ...+.+++|+|||++|+..+.+ +.+++|++....
T Consensus 376 ~~~~~~~~l~~~d~~~~~~~~-l--~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 376 EASPLERHFYCIDIKGGKTKD-L--TP-ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSCTTCBEEEEEETTCCCCEE-S--CC-SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCCceEEEEEEEcCCCCcee-c--cC-CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 4 3 57777777766332 2 24 5679999999999988776443 569999987654
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=3.8e-24 Score=187.35 Aligned_cols=265 Identities=12% Similarity=-0.002 Sum_probs=191.3
Q ss_pred cCceeEEEEcCCCCccccCCceEEEee-CCCC-CeeEEEEcCCCCeEE-EEeCCCeEEEEEEeCCccceeeccccCCCCC
Q 016257 34 PSVLEIFSFDPKTTSVYTSPLVTYVFD-ESEG-DPMTIAVNPSGDDFV-CSTTNGGCKLFEVYGGATDINLLAKKMPPLQ 110 (392)
Q Consensus 34 ~~~i~i~~~~~~~~~~~~~~~~~~~~~-~h~~-~v~~~~~sp~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 110 (392)
++.|.+|+.. .......+. ++.. .+..++|+|+++.++ ++..++.|.+||+.+++....+..... ..
T Consensus 10 ~~~v~~~d~~--------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~ 79 (337)
T 1pby_B 10 PDKLVVIDTE--------KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP--EE 79 (337)
T ss_dssp TTEEEEEETT--------TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT--TE
T ss_pred CCeEEEEECC--------CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc--cc
Confidence 4567777654 222233333 2222 588999999998765 455678999999988765444322110 00
Q ss_pred CCCCeEEEEecCCCCEEEEEe------------CCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcE
Q 016257 111 DAGPQKCLSFSVDGSRFAAGG------------VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSA 178 (392)
Q Consensus 111 ~~~~v~~~~~s~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i 178 (392)
+...+..++|+|+|++|+++. .++.|.+||+.+++....+.. ...+.+++|+|++++|+++ ++.|
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 112567899999999998886 579999999998877655443 3467889999999988888 6889
Q ss_pred EEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCcc-----------------------EEEEEeCCCce
Q 016257 179 RIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA-----------------------LLAVYDISTWN 235 (392)
Q Consensus 179 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~-----------------------~i~v~d~~~~~ 235 (392)
++||+++++....+..+.. ...+.|+|++..++ +.+..++ .|.+||+++++
T Consensus 157 ~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 230 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSW--EAETYAQPDVLAVW----NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE 230 (337)
T ss_dssp EEEETTTTEEEEEECSTTT--TTTTBCCCBCCCCC----CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC
T ss_pred EEEECCCCcEeeeeecccc--CCCceeCCCccEEe----eeccCCCceeeeeeccccccccccccccccceEEEeCCCCC
Confidence 9999999988777764431 11337899988632 2222222 57899999887
Q ss_pred ee-eeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEE
Q 016257 236 KI-GHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMI 314 (392)
Q Consensus 236 ~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 314 (392)
.. .....+...+..++|+|+|++++++ ++.|++||+.+++....+.. ...+.+++|+|+|++|++++.++.|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~i~v 305 (337)
T 1pby_B 231 MAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL---PHSYYSVNVSTDGSTVWLGGALGDLAA 305 (337)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC---SSCCCEEEECTTSCEEEEESBSSEEEE
T ss_pred ceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC---CCceeeEEECCCCCEEEEEcCCCcEEE
Confidence 64 2223445577889999999999988 68999999999988776643 346789999999999999999999999
Q ss_pred EEeecCcc
Q 016257 315 TKLTVPAD 322 (392)
Q Consensus 315 w~~~~~~~ 322 (392)
|++...+.
T Consensus 306 ~d~~~~~~ 313 (337)
T 1pby_B 306 YDAETLEK 313 (337)
T ss_dssp EETTTCCE
T ss_pred EECcCCcE
Confidence 99876543
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.2e-24 Score=218.01 Aligned_cols=331 Identities=10% Similarity=0.030 Sum_probs=222.8
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCe-------eEEEEcCCCC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDP-------MTIAVNPSGD 76 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v-------~~~~~sp~~~ 76 (392)
.+.+.+++|+||++.+.+...... .++...||.++..+.. ...+..|...+ ..++|+|||+
T Consensus 52 ~~~v~~~~~SPDG~~la~~s~~~~-----~~~~~~i~~~d~~~g~-------~~~lt~~~~~~~~~~~~~~~~~~SpDg~ 119 (1045)
T 1k32_A 52 LGVINNARFFPDGRKIAIRVMRGS-----SLNTADLYFYNGENGE-------IKRITYFSGKSTGRRMFTDVAGFDPDGN 119 (1045)
T ss_dssp SSEEEEEEECTTSSEEEEEEEEST-----TCCEEEEEEEETTTTE-------EEECCCCCEEEETTEECSEEEEECTTCC
T ss_pred CCcccCeEECCCCCEEEEEEeecc-----CCCCCeEEEEECCCCC-------eEEcccCCCcccccccccccccCCCCCE
Confidence 467999999999976433332110 0122345555543321 34577788888 9999999999
Q ss_pred eEEEEeCC------CeEEEEEEeCCccceeeccc------------------------------------------cCCC
Q 016257 77 DFVCSTTN------GGCKLFEVYGGATDINLLAK------------------------------------------KMPP 108 (392)
Q Consensus 77 ~l~~~~~d------~~i~iw~~~~~~~~~~~~~~------------------------------------------~~~~ 108 (392)
.+++++.+ ..|.+|++.+++........ ....
T Consensus 120 ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l 199 (1045)
T 1k32_A 120 LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI 199 (1045)
T ss_dssp EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE
T ss_pred EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEEC
Confidence 77777644 35777776555421100000 0000
Q ss_pred CCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC-CceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCe
Q 016257 109 LQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS-LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGV 187 (392)
Q Consensus 109 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~ 187 (392)
..|...+.++.|+++ .++++++.++.+.+|.+.. +.....+..+ ..+...+|+|||+.|+++. ++.|++||+...
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~-~~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~- 275 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSF-TDYYPRHLNTDGRRILFSK-GGSIYIFNPDTE- 275 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCC-CSSCEEEEEESSSCEEEEE-TTEEEEECTTTC-
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCC-CCcceeeEcCCCCEEEEEe-CCEEEEecCCce-
Confidence 235677888999988 5667777889899998653 3333333333 3466779999999998874 899999999443
Q ss_pred eeEEEecC----------CCcceEEEEec-CCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCC-CcEEEEECCC
Q 016257 188 AWTFLTRN----------SDEKIELCRFS-KDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRK-PASVLSISLD 255 (392)
Q Consensus 188 ~~~~~~~~----------~~~~v~~~~~~-~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~v~~~~~s~~ 255 (392)
.+..+..+ +...+..++|+ |+|+. ++.++ ++.+.+|+...++.. .+..+.. .+..++|+ |
T Consensus 276 ~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~-----la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-d 347 (1045)
T 1k32_A 276 KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDL-----IAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-T 347 (1045)
T ss_dssp CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGC-----EEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-S
T ss_pred EeeeeccCcccccccccccccccceeeecCCCCCE-----EEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-C
Confidence 33344331 12258899999 99997 34443 789999999887654 3455566 78999999 9
Q ss_pred CCEEEEEeCCCcEE-EEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccc--------e
Q 016257 256 GKYLAMGSKDGDIC-VVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKE--------W 326 (392)
Q Consensus 256 ~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~--------~ 326 (392)
|+.|++++.++.+. +||+.+++..... .| ...+..++|+|||++|++++.++.|++|++..+..... .
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~~~~l~--~~-~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~ 424 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGKAEKFE--EN-LGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMIT 424 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEECC--CC-CCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC
T ss_pred CCeEEEEECCCceEEEEECCCCCceEec--CC-ccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCcc
Confidence 99999999888888 9999887765443 56 78899999999999999999999999999976543221 2
Q ss_pred eeeeeeeeeeeeceEEEEeeec----------ceeeeecccccccccCCC
Q 016257 327 QIYSLLLALFLASAVVFYIFFE----------NSDSFWNFPVARNQHGGP 366 (392)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~d----------~~i~~W~~~~~~~~~~~p 366 (392)
.+.+++++ ..+++++.+ +.|++||+..++......
T Consensus 425 ~~~~SpDG-----~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~ 469 (1045)
T 1k32_A 425 DFTISDNS-----RFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 469 (1045)
T ss_dssp CEEECTTS-----CEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC
T ss_pred ceEECCCC-----CeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC
Confidence 22333333 234444443 489999998876443333
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=3.3e-23 Score=182.68 Aligned_cols=242 Identities=8% Similarity=-0.006 Sum_probs=188.7
Q ss_pred CCCeeEEEEcCCCCeEEEEeC-------CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE-eCCC
Q 016257 63 EGDPMTIAVNPSGDDFVCSTT-------NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDG 134 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg 134 (392)
...+..++|+|+++++++++. ++.|.+||..+++....+.. ...+..++|+|+|++++++ ..++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--------~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--------DLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--------SSCCCSEEEETTTTEEEEEETTTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--------CCCcceEEECCCCCEEEEEecCCC
Confidence 457889999999998888774 56899999988775544432 2346789999999966555 4579
Q ss_pred cEEEEeCCCCceeecccCCCC---------cEEEEEecCCCCeEEEEc--CCCcEEEEECCCCeeeEEEecCCCcceEEE
Q 016257 135 HLRIMHWPSLRIILDEPKAHK---------SVLDMDFSLDSEFLATTS--TDGSARIWKTEDGVAWTFLTRNSDEKIELC 203 (392)
Q Consensus 135 ~i~i~d~~~~~~~~~~~~~~~---------~i~~i~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~ 203 (392)
.|.+||.++++....+..+.. .+.+++|+|+++++++++ .++.|.+||+++++....+... ...+..+
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~ 190 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-GKMSTGL 190 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-CTTCCCC
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-CCccceE
Confidence 999999999887665544332 278899999999877765 4788999999999888877633 2247889
Q ss_pred EecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc----cCCCcEEEEECCCCCEEEEEeC-CCcEEEEecCCcee
Q 016257 204 RFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL----LRKPASVLSISLDGKYLAMGSK-DGDICVVDVKKMEI 278 (392)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~ 278 (392)
+|+|+++. ++.+..++.|.+||..+++....+.. +...+..++|+|+++++++++. ++.|.+||..+++.
T Consensus 191 ~~s~dg~~-----l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 191 ALDSEGKR-----LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp EEETTTTE-----EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE
T ss_pred EECCCCCE-----EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 99999997 56677799999999999888766554 3456788999999998777765 48999999999988
Q ss_pred eeeeeccccCcceEEEEEeeCCCeEEEEe-CCCeEEEEEeecCcc
Q 016257 279 NHWSKRLHLGTSIALVEFCPTQRVVLTAS-KEWGAMITKLTVPAD 322 (392)
Q Consensus 279 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~ 322 (392)
...+.... ...++|+|+|+++++++ .++.|.+|++...+.
T Consensus 266 ~~~~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 266 LAKVAAPE----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEEECSS----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEcCC----CceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 77764322 25699999999666555 689999999876543
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=8.5e-24 Score=184.83 Aligned_cols=274 Identities=8% Similarity=-0.035 Sum_probs=188.4
Q ss_pred EEcCCCCe-EEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC-CCcEEEEeCCCCce-
Q 016257 70 AVNPSGDD-FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-DGHLRIMHWPSLRI- 146 (392)
Q Consensus 70 ~~sp~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~- 146 (392)
.|.++++. +++.+.++.|.+||..+++....... +...+ .++|+|+++++++++. ++.|++||+++++.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL-------GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC-------CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc-------cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 45565555 66777889999999988875444332 23455 9999999997777665 88999999998886
Q ss_pred eecccCCCCcEEEEEecCCCCeEEEEcCCC---cEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc
Q 016257 147 ILDEPKAHKSVLDMDFSLDSEFLATTSTDG---SARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (392)
Q Consensus 147 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d 223 (392)
......+..+..+++|+|++++++++..++ .|.+||+++++.+..+..+. ....++|+|+++++ +++...+
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~spdg~~l----~~~~~~~ 149 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY--DAVGIAISPNGNGL----ILIDRSS 149 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT--TEEEEEECTTSSCE----EEEEETT
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC--CccceEECCCCCEE----EEEecCC
Confidence 544444444554599999999999655553 89999999998888776443 47899999999863 2444455
Q ss_pred cE-EEEEeCCCceee----eeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCcee---eeeeeccccCcceEEE
Q 016257 224 AL-LAVYDISTWNKI----GHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEI---NHWSKRLHLGTSIALV 294 (392)
Q Consensus 224 ~~-i~v~d~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~---~~~~~~~~~~~~i~~~ 294 (392)
+. |.+|++.....+ ............++|+|+|+++++++ .++.|++||+.+++. ...+. . ...+..+
T Consensus 150 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~-~~~~~~~ 226 (331)
T 3u4y_A 150 ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--T-NNLPGTI 226 (331)
T ss_dssp TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--C-SSCCCCE
T ss_pred CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--C-CCCCceE
Confidence 66 999998753322 11223345678999999999766555 688999999998887 55543 2 4677899
Q ss_pred EEeeCCCeEEEEe-CCCeEEEEEeecCccccceeeeee----e--------eeeeeeceEEEEee-ecceeeeecccccc
Q 016257 295 EFCPTQRVVLTAS-KEWGAMITKLTVPADWKEWQIYSL----L--------LALFLASAVVFYIF-FENSDSFWNFPVAR 360 (392)
Q Consensus 295 ~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~-~d~~i~~W~~~~~~ 360 (392)
+|+|+|++|++++ .++.|.+|++...+.......... . .........++.+. .++.|++|++....
T Consensus 227 ~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 227 VVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 9999999776655 578899999875443111110000 0 01111233444444 46699999998654
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=6.7e-23 Score=179.82 Aligned_cols=274 Identities=13% Similarity=0.143 Sum_probs=181.3
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
...+.+++|+|++.. +++ ++. .++.+.+|.++..+... .....+..+. .+..++|+|++++|++++.
T Consensus 37 ~~~~~~~~~spdg~~--l~~-~~~-----~~~~v~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRY--LYV-GVR-----PEFRVLAYRIAPDDGAL----TFAAESALPG-SLTHISTDHQGQFVFVGSY 103 (343)
T ss_dssp SSCCCCEEECTTSSE--EEE-EET-----TTTEEEEEEECTTTCCE----EEEEEEECSS-CCSEEEECTTSSEEEEEET
T ss_pred CCCCceEEECCCCCE--EEE-eec-----CCCeEEEEEecCCCCce----eeccccccCC-CCcEEEEcCCCCEEEEEec
Confidence 456788999999865 333 222 13679999998543322 1222344333 8899999999998877665
Q ss_pred -CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCCC-Cceee----cccC-CCC
Q 016257 84 -NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPS-LRIIL----DEPK-AHK 155 (392)
Q Consensus 84 -d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~-~~~~~----~~~~-~~~ 155 (392)
++.|.+|++..+........ ......+.+++|+|+++++++++ .++.|++||+.+ ++... .... ...
T Consensus 104 ~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLPVGVVDV-----VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp TTTEEEEEEEETTEEEEEEEE-----ECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred CCCeEEEEECCCCcccccccc-----ccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC
Confidence 88899999963221111111 11334688999999999888877 889999999987 54421 1222 234
Q ss_pred cEEEEEecCCCCeEEEE-cCCCcEEEEECCC--Cee--eEEEecCC-----CcceEEEEecCCCCcceEEEEEEeCCccE
Q 016257 156 SVLDMDFSLDSEFLATT-STDGSARIWKTED--GVA--WTFLTRNS-----DEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (392)
Q Consensus 156 ~i~~i~~~~~~~~l~~~-~~d~~i~vwd~~~--~~~--~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~d~~ 225 (392)
.+..++|+|++++++++ ..++.|.+|+++. ++. ........ ...+..++|+|+++.+ +++...++.
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l----~v~~~~~~~ 254 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL----YACDRTASL 254 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE----EEEETTTTE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE----EEEecCCCE
Confidence 78899999999977554 4789999999953 332 22222111 1246689999999862 346668899
Q ss_pred EEEEeCC----CceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEec--CCceeeeeeeccccCcceEEEEEee
Q 016257 226 LAVYDIS----TWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDV--KKMEINHWSKRLHLGTSIALVEFCP 298 (392)
Q Consensus 226 i~v~d~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~i~~~~~s~ 298 (392)
|.+||++ ..+.+..+..+.. +..++|+|+|++|++++ .++.|.+|++ .+++...... ........+++|.+
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~-~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR-YAVGQGPMWVVVNA 332 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEE-EECSSSCCEEEEEE
T ss_pred EEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccc-cccCCCCeeEEEEc
Confidence 9999998 2334444444333 88999999999988887 5799999954 4665433221 11135677888887
Q ss_pred CCC
Q 016257 299 TQR 301 (392)
Q Consensus 299 ~~~ 301 (392)
+.+
T Consensus 333 ~~~ 335 (343)
T 1ri6_A 333 HEG 335 (343)
T ss_dssp EC-
T ss_pred ccC
Confidence 644
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=2.1e-22 Score=178.18 Aligned_cols=270 Identities=12% Similarity=0.111 Sum_probs=183.9
Q ss_pred CcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC----CeEEEEEEeCCc-cceeeccccCC
Q 016257 33 SPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN----GGCKLFEVYGGA-TDINLLAKKMP 107 (392)
Q Consensus 33 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d----~~i~iw~~~~~~-~~~~~~~~~~~ 107 (392)
.++.|.+|.++..+..+. ....+ +...+..++|+|+|++|++++.+ +.+.+|++.... ....+....
T Consensus 25 ~~~~i~~~~~d~~~g~~~----~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~-- 96 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESL----PLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK-- 96 (361)
T ss_dssp SCCEEEEEEEETTTCCEE----EEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE--
T ss_pred CCCCEEEEEEeCCCCCEE----Eeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec--
Confidence 467899999987654331 11122 67788899999999999998875 789999998742 111111111
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCCCCceeeccc--------------CCCCcEEEEEecCCCCeEEEE
Q 016257 108 PLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRIILDEP--------------KAHKSVLDMDFSLDSEFLATT 172 (392)
Q Consensus 108 ~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~--------------~~~~~i~~i~~~~~~~~l~~~ 172 (392)
.+......+++ ++++|++++ .++.+.+|++.....+.... .+...+.+++|+|++++++++
T Consensus 97 --~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~ 172 (361)
T 3scy_A 97 --TMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD 172 (361)
T ss_dssp --CSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred --cCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEE
Confidence 12345677777 888887776 57899999997544322111 011246889999999976655
Q ss_pred c-CCCcEEEEECCCCee------e------EEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee--e
Q 016257 173 S-TDGSARIWKTEDGVA------W------TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK--I 237 (392)
Q Consensus 173 ~-~d~~i~vwd~~~~~~------~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~--~ 237 (392)
+ .++.|.+|++..... + ..........+..++|+|+++.+ .++...++.|.+||+++++. +
T Consensus 173 ~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l----~v~~~~~~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 173 DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFA----YLINEIGGTVIAFRYADGMLDEI 248 (361)
T ss_dssp ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEE----EEEETTTCEEEEEEEETTEEEEE
T ss_pred eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEE----EEEcCCCCeEEEEEecCCceEEe
Confidence 4 578999999875431 1 22233334467899999999862 24455789999999987654 2
Q ss_pred eee---cccCCCcEEEEECCCCCEEEEEeCC--CcEEEEecC--CceeeeeeeccccCcceEEEEEeeCCCeEEEEe-CC
Q 016257 238 GHK---RLLRKPASVLSISLDGKYLAMGSKD--GDICVVDVK--KMEINHWSKRLHLGTSIALVEFCPTQRVVLTAS-KE 309 (392)
Q Consensus 238 ~~~---~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~iwd~~--~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d 309 (392)
... ..+......++|+|||++|+++..+ +.|.+|++. +++......... ...+..++|+|+|++|++++ .+
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTT
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCC
Confidence 222 2223456799999999999777654 889999996 444322211112 45678999999999888887 67
Q ss_pred CeEEEEEeec
Q 016257 310 WGAMITKLTV 319 (392)
Q Consensus 310 g~i~iw~~~~ 319 (392)
+.|.+|+++.
T Consensus 328 ~~v~v~~~d~ 337 (361)
T 3scy_A 328 NVIQIFERDQ 337 (361)
T ss_dssp TEEEEEEECT
T ss_pred CCEEEEEEEC
Confidence 9999998874
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=2.3e-24 Score=207.74 Aligned_cols=237 Identities=14% Similarity=0.050 Sum_probs=170.3
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 143 (392)
..|.+++|+|| +.++.+ .++.+++||+.+++.... . .+...+.+++|||||++|+++ .++.|++|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l-~-------~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYL-F-------DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEE-E-------CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEc-c-------CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence 56999999999 666665 458999999987653221 1 134567889999999999985 689999999988
Q ss_pred -----CceeecccCCCCc--------------EEEEEecCCCCeEEEEc-------------------------------
Q 016257 144 -----LRIILDEPKAHKS--------------VLDMDFSLDSEFLATTS------------------------------- 173 (392)
Q Consensus 144 -----~~~~~~~~~~~~~--------------i~~i~~~~~~~~l~~~~------------------------------- 173 (392)
++.......+... +.++.|+|||++|++++
T Consensus 151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 7765444333333 48899999999999887
Q ss_pred --CCCcEEEEECCCCeeeEEEec-CCCcceEEEEecCCCCcceEEEEEEeCCc-----cEEEEEeCCCceeeeeec--cc
Q 016257 174 --TDGSARIWKTEDGVAWTFLTR-NSDEKIELCRFSKDGTKPFLFCTVQRGDK-----ALLAVYDISTWNKIGHKR--LL 243 (392)
Q Consensus 174 --~d~~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~d-----~~i~v~d~~~~~~~~~~~--~~ 243 (392)
.+..|++||+.+++....... .+...+..++|+||++. ++.++.+ ..|.+||+.+++....+. ..
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-----l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI-----LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE-----EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE-----EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC
Confidence 446799999998876544322 23456899999999997 3443333 489999999883332222 11
Q ss_pred CC---CcEEEEECC--CCCEEEEEeCCCcEEEEecC-CceeeeeeeccccCcceEE-EEEeeCCCeEEEEeCC-C--eEE
Q 016257 244 RK---PASVLSISL--DGKYLAMGSKDGDICVVDVK-KMEINHWSKRLHLGTSIAL-VEFCPTQRVVLTASKE-W--GAM 313 (392)
Q Consensus 244 ~~---~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~d-g--~i~ 313 (392)
.. .+..++|+| ||+++++++.|+.++||+++ +++....+ ..+ ...+.. ++|+|+|+.|+.++.+ + .+.
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l-~~~-~~~v~~~~~~spdg~~l~~~~~~~~~~~~~ 383 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV-TKG-EWEVTNFAGFDPKGTRLYFESTEASPLERH 383 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC-CCS-SSCEEEEEEECTTSSEEEEEESSSCTTCBE
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec-CCC-CeEEEeeeEEcCCCCEEEEEecCCCCceEE
Confidence 21 246789999 99999999999999999876 55555544 344 566776 8999999987666554 3 245
Q ss_pred EEEee
Q 016257 314 ITKLT 318 (392)
Q Consensus 314 iw~~~ 318 (392)
||.++
T Consensus 384 l~~~d 388 (706)
T 2z3z_A 384 FYCID 388 (706)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=2e-23 Score=209.14 Aligned_cols=278 Identities=10% Similarity=-0.028 Sum_probs=197.9
Q ss_pred CCCCeeEEEEc-CCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCC-CeEEEEecCCCCEEEEEeCCCcEE-E
Q 016257 62 SEGDPMTIAVN-PSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAG-PQKCLSFSVDGSRFAAGGVDGHLR-I 138 (392)
Q Consensus 62 h~~~v~~~~~s-p~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~-i 138 (392)
|...+.+++|+ |||+.|++++ ++.+.+|++..+... .+ ..+.. .+..++|+ ||+.|++++.++.+. +
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~-------~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~ 363 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KV-------PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGI 363 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-EC-------SCCSCEEEEEECSS-SEEEEEEEETTEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-Ec-------cCCCcceEEeeeEc-CCCeEEEEECCCceEEE
Confidence 45579999999 9999999887 778999998765422 11 12445 78999999 999999999888888 9
Q ss_pred EeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEE
Q 016257 139 MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
|++.+++... +..+...+..++|+|||++|++++.++.|++||+.+++.......+ ...+..++|+|||++ ++
T Consensus 364 ~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~-~~~v~~~~~SpDG~~-----la 436 (1045)
T 1k32_A 364 YDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR-EAMITDFTISDNSRF-----IA 436 (1045)
T ss_dssp EETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCCEEECTTSCE-----EE
T ss_pred EECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC-CCCccceEECCCCCe-----EE
Confidence 9998776543 3455568999999999999999999999999999998877666444 447899999999997 33
Q ss_pred EeCC----------ccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCcee-------e--
Q 016257 219 QRGD----------KALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI-------N-- 279 (392)
Q Consensus 219 ~~~~----------d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-------~-- 279 (392)
.++. ++.|++||+.+++ ...+..+...+..++|+|||++|++++.++...+|+...... +
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFV 515 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEE
T ss_pred EEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEE
Confidence 3332 4699999999877 556667777888999999999999999887777776433211 0
Q ss_pred --------------------------------e-eeeccccCcceEEEEEeeCCCeEEE-----------EeC--CCeEE
Q 016257 280 --------------------------------H-WSKRLHLGTSIALVEFCPTQRVVLT-----------ASK--EWGAM 313 (392)
Q Consensus 280 --------------------------------~-~~~~~~~~~~i~~~~~s~~~~~l~~-----------~~~--dg~i~ 313 (392)
. .....+ .+.+..++++|||+++++ .+. ...+.
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~-~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~ 594 (1045)
T 1k32_A 516 IPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVD-PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLL 594 (1045)
T ss_dssp EESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCC-CBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEE
T ss_pred EEeCCCCCCccccCcCccccccccccccCHhHceEEcCCC-CCChhheEEcCCCeEEEEecccCcccccccccCCCceEE
Confidence 0 000123 567899999999987775 122 34566
Q ss_pred EEEeecCccccceeeeeeeeeeeeeceEEEEeeecceeeeecccccc
Q 016257 314 ITKLTVPADWKEWQIYSLLLALFLASAVVFYIFFENSDSFWNFPVAR 360 (392)
Q Consensus 314 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~ 360 (392)
+||+......... ..............++++. ++.+++|++.+++
T Consensus 595 ~~d~~~~~~~~l~-~~v~~~~~S~DG~~l~~~~-~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 595 KYDVKTRKVTEVK-NNLTDLRLSADRKTVMVRK-DDGKIYTFPLEKP 639 (1045)
T ss_dssp EEETTTCCEEEEE-EEEEEEEECTTSCEEEEEE-TTSCEEEEESSCT
T ss_pred EEECCCCcEEEee-cCcceEEECCCCCEEEEEc-CCcEEEEeCccCc
Confidence 6666544322111 1111111111233444444 5589999998776
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.8e-23 Score=182.97 Aligned_cols=269 Identities=12% Similarity=0.028 Sum_probs=191.7
Q ss_pred CeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCC-CeEEEEecCCCCEEE-EEeCCCcEEEEeCCCCceeecccCC
Q 016257 76 DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAG-PQKCLSFSVDGSRFA-AGGVDGHLRIMHWPSLRIILDEPKA 153 (392)
Q Consensus 76 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~ 153 (392)
++|++++.++.|.+||+.+++....+... +.. .+..++|+|++++++ ++..++.|.+||+.+++....+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIA------DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECT------TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcC------CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 47889999999999999887654443211 111 478899999998765 4556789999999998876544432
Q ss_pred C-----CcEEEEEecCCCCeEEEEc------------CCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEE
Q 016257 154 H-----KSVLDMDFSLDSEFLATTS------------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFC 216 (392)
Q Consensus 154 ~-----~~i~~i~~~~~~~~l~~~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 216 (392)
. ..+..++|+|+++++++++ .++.|.+||+.+++....+... ..+..++|+|+++.
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~----- 148 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSK----- 148 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSC-----
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCE-----
Confidence 1 1567899999999988886 5799999999998887777643 35788999999997
Q ss_pred EEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCC------------------------cEEEEe
Q 016257 217 TVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDG------------------------DICVVD 272 (392)
Q Consensus 217 ~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg------------------------~i~iwd 272 (392)
++.+ ++.|.+||+++++....+..... ...+.|+|+++.++..+.++ .|.+||
T Consensus 149 l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 225 (337)
T 1pby_B 149 LYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMD 225 (337)
T ss_dssp EEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEE
T ss_pred EEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEe
Confidence 3444 57899999999887766554331 11237899998776655332 468999
Q ss_pred cCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccceeeeeeeeeeee--eceEEEEeeecce
Q 016257 273 VKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEWQIYSLLLALFL--ASAVVFYIFFENS 350 (392)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~ 350 (392)
+.+++........+ ...+.+++|+|+|++++++ ++.|++|++...+..........+..... ....+++++.++.
T Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 302 (337)
T 1pby_B 226 LETGEMAMREVRIM-DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGD 302 (337)
T ss_dssp TTTCCEEEEEEEEC-SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSE
T ss_pred CCCCCceEeecCCC-CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCc
Confidence 99988753322344 5678899999999998888 78999999876543322221111222222 2335666677899
Q ss_pred eeeeccccccccc
Q 016257 351 DSFWNFPVARNQH 363 (392)
Q Consensus 351 i~~W~~~~~~~~~ 363 (392)
|++||+.+++.+.
T Consensus 303 i~v~d~~~~~~~~ 315 (337)
T 1pby_B 303 LAAYDAETLEKKG 315 (337)
T ss_dssp EEEEETTTCCEEE
T ss_pred EEEEECcCCcEEE
Confidence 9999998887553
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=1.4e-23 Score=202.96 Aligned_cols=292 Identities=11% Similarity=0.008 Sum_probs=187.8
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCC
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~ 85 (392)
.|.+++|+||++.+.+............++.+.+|+++.... .......+|...+..++|||||+.|++++. +
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~ 134 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP------QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-N 134 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC------EECCCTTCCSCCCSBCCBCSSTTCEEEEET-T
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce------EeccCCccccccccccEECCCCCEEEEEEC-C
Confidence 488999999996522221111111112246677777653321 111112345566999999999999999876 6
Q ss_pred eEEEEEEeCCccceeeccccCCC--C---------CCCCCeEEEEecCCCCEEEEEeCCC--------------------
Q 016257 86 GCKLFEVYGGATDINLLAKKMPP--L---------QDAGPQKCLSFSVDGSRFAAGGVDG-------------------- 134 (392)
Q Consensus 86 ~i~iw~~~~~~~~~~~~~~~~~~--~---------~~~~~v~~~~~s~~~~~l~~~~~dg-------------------- 134 (392)
.|++|++.+++............ . +..+.+.+++|||||++|++++.++
T Consensus 135 ~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (723)
T 1xfd_A 135 NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVK 214 (723)
T ss_dssp EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCE
T ss_pred eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcce
Confidence 89999998776432221111000 0 0012347899999999999987543
Q ss_pred --------------cEEEEeCCCCceeecccCC------CCcEEEEEecCCCCeEEEEcC----CCcEEEEECCCCeeeE
Q 016257 135 --------------HLRIMHWPSLRIILDEPKA------HKSVLDMDFSLDSEFLATTST----DGSARIWKTEDGVAWT 190 (392)
Q Consensus 135 --------------~i~i~d~~~~~~~~~~~~~------~~~i~~i~~~~~~~~l~~~~~----d~~i~vwd~~~~~~~~ 190 (392)
.|++||+.+++....+..+ ...+..++|+|||+++++... +..|++||+.+++...
T Consensus 215 ~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 215 PYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK 294 (723)
T ss_dssp EEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE
T ss_pred eccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE
Confidence 7999999888754444433 447899999999998876643 3579999999988776
Q ss_pred EEecCCCcce----EEEEecCCCCcceEEEEEEeCCcc------EEEEEe-CCCcee--eeeecccCCCcEE-EEECCCC
Q 016257 191 FLTRNSDEKI----ELCRFSKDGTKPFLFCTVQRGDKA------LLAVYD-ISTWNK--IGHKRLLRKPASV-LSISLDG 256 (392)
Q Consensus 191 ~~~~~~~~~v----~~~~~~~~~~~~~~~~~~~~~~d~------~i~v~d-~~~~~~--~~~~~~~~~~v~~-~~~s~~~ 256 (392)
.+..++...+ ..++|+|||+.++ +.++..++ .|.+|| ...++. ...+......+.. ++|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~spdg~~l~---~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg 371 (723)
T 1xfd_A 295 KHEDESEAWLHRQNEEPVFSKDGRKFF---FIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKG 371 (723)
T ss_dssp EEEEECSSCCCCCCCCCEECTTSCSEE---EEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTT
T ss_pred EEEeccCCEEeccCCCceEcCCCCeEE---EEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCC
Confidence 6554433333 3789999999732 12244555 677788 344431 3444433444554 6999999
Q ss_pred CEEEEEeCC---CcEEEEecCCce--eeeeeecc--ccCcceEEEEEeeCCCeEEEEeC
Q 016257 257 KYLAMGSKD---GDICVVDVKKME--INHWSKRL--HLGTSIALVEFCPTQRVVLTASK 308 (392)
Q Consensus 257 ~~l~~~~~d---g~i~iwd~~~~~--~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~ 308 (392)
+.|+..+.+ +.+++|++.... ....+... | ...+..++|+|||++|+....
T Consensus 372 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 372 NKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVE-NCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp TEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSS-SCCCCEEEECTTSSEEEEECC
T ss_pred CEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccC-CCCeEEEEECCCCCEEEEEcc
Confidence 999876655 789999986432 22222211 4 567889999999998876543
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=1.3e-23 Score=198.00 Aligned_cols=268 Identities=10% Similarity=0.013 Sum_probs=190.8
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCC-CCeeEEEEcCCCCeEEEEeC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESE-GDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~l~~~~~ 83 (392)
.||++++|+||++++ ++++. .++.++||.++ ..... .+..|. ..+..+.|+|| +.+++++.
T Consensus 22 ~~~~~~~~~~DG~~l---a~~s~-----~~g~~~lw~~~--------~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~ 83 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKL---LVVGF-----SEGSVNAYLYD--------GGETV-KLNREPINSVLDPHYGVG-RVILVRDV 83 (582)
T ss_dssp SCEEEEEEEETTTEE---EEEEE-----ETTEEEEEEEE--------TTEEE-ECCSSCCSEECEECTTCS-EEEEEEEC
T ss_pred cchheeecCCCCCeE---EEEEc-----cCCceeEEEEc--------CCCcE-eeecccccccccccCCCC-eEEEEecc
Confidence 589999999999763 33222 25668999974 22222 234444 68999999999 77777665
Q ss_pred ---CCeEEEEEEeC--CccceeeccccCCCCCCCCCeEEEEecCCCCE-EEEEeCCCcEEEEeCCCCceeecccCCCCcE
Q 016257 84 ---NGGCKLFEVYG--GATDINLLAKKMPPLQDAGPQKCLSFSVDGSR-FAAGGVDGHLRIMHWPSLRIILDEPKAHKSV 157 (392)
Q Consensus 84 ---d~~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i 157 (392)
+....+|.+.. ......+. ....+...+|+|||+. +++.+.++.+.+||+++++..... .+..
T Consensus 84 ~~g~~~~~l~~~~~~~~g~~~~l~--------~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~-~~~~-- 152 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRPGEEQRLE--------AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA-RLPG-- 152 (582)
T ss_dssp STTSCCEEEEEEETTSTTCCEECT--------TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-EESS--
T ss_pred CCCCcceEEEEEeccCCCcccccc--------CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-cCCC--
Confidence 45577887765 32222111 1223456788888864 333344555669999888754332 2222
Q ss_pred EEEEecCCCCeEEEEcCC----CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCcc--EEEEEeC
Q 016257 158 LDMDFSLDSEFLATTSTD----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA--LLAVYDI 231 (392)
Q Consensus 158 ~~i~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~--~i~v~d~ 231 (392)
.+++|+|||++|++++.+ +.|++||+.+++.. .+..+ ...+..++|+|||+. ++++..++ .|++||+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~-~~~~~~~~~SpDG~~-----l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSG-EGSFSSASISPGMKV-----TAGLETAREARLVTVDP 225 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCS-SCEEEEEEECTTSCE-----EEEEECSSCEEEEEECT
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecC-CCccccceECCCCCE-----EEEccCCCeeEEEEEcC
Confidence 789999999999988776 78999999887764 44443 446899999999997 45666777 8999999
Q ss_pred CCceeeeeecccCCCcEEEE--------ECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeE
Q 016257 232 STWNKIGHKRLLRKPASVLS--------ISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVV 303 (392)
Q Consensus 232 ~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 303 (392)
.+++.. .+..+...+..++ |+|||.++++++.|+.+++|++ ++... .. .+.+.+++|+ +++++
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~----~~-~~~v~~~~~s-dg~~l 296 (582)
T 3o4h_A 226 RDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE----AP-QGNHGRVVLW-RGKLV 296 (582)
T ss_dssp TTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC----CC-SSEEEEEEEE-TTEEE
T ss_pred CCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec----cC-CCceEEEEec-CCEEE
Confidence 988877 6666666666666 9999999999999999999999 66544 22 5678999999 99998
Q ss_pred EEEeCCCe---EEEEEe
Q 016257 304 LTASKEWG---AMITKL 317 (392)
Q Consensus 304 ~~~~~dg~---i~iw~~ 317 (392)
++++.+.. +.+|+.
T Consensus 297 ~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 297 TSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EEEEETTEEEEEEEETT
T ss_pred EEEcCCCCCCeEEEEcC
Confidence 88887744 444443
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=2.7e-23 Score=195.82 Aligned_cols=231 Identities=13% Similarity=0.038 Sum_probs=170.0
Q ss_pred CCCeeEEEEcCCCCeEEEEeC-CCeEEEEEEeCCccceeeccccCCCCCCC-CCeEEEEecCCCCEEEEEeC---CCcEE
Q 016257 63 EGDPMTIAVNPSGDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQDA-GPQKCLSFSVDGSRFAAGGV---DGHLR 137 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~---dg~i~ 137 (392)
..+|++++|+|||+.||+++. ||++.||++.+++. ..+. .+. ..+..++|+|| +.+++++. +...+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt-------~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLN-------REPINSVLDPHYGVG-RVILVRDVSKGAEQHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECC-------SSCCSEECEECTTCS-EEEEEEECSTTSCCEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-Eeee-------cccccccccccCCCC-eEEEEeccCCCCcceE
Confidence 457999999999999998876 99999999866543 2211 133 57899999999 77777764 45556
Q ss_pred EEeCCC---CceeecccCCCCcEEEEEecCCCCe-EEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcce
Q 016257 138 IMHWPS---LRIILDEPKAHKSVLDMDFSLDSEF-LATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (392)
Q Consensus 138 i~d~~~---~~~~~~~~~~~~~i~~i~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (392)
+|.+.. +... .+... ..+...+|+|+++. +++++.++.+.+||+.+++.......+ . .+++|+|||+.
T Consensus 92 l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~---~~~~~spDG~~-- 163 (582)
T 3o4h_A 92 LFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G---FGFVSDIRGDL-- 163 (582)
T ss_dssp EEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S---CEEEEEEETTE--
T ss_pred EEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C---ceEEECCCCCE--
Confidence 655432 2222 23222 23446688888864 333344455669999988765544332 2 78999999997
Q ss_pred EEEEEEeCCc----cEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCC--cEEEEecCCceeeeeeecccc
Q 016257 214 LFCTVQRGDK----ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDG--DICVVDVKKMEINHWSKRLHL 287 (392)
Q Consensus 214 ~~~~~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~ 287 (392)
++.++.+ ..|++||+.+++.. .+..+...+..++|||||+.|+++..++ .|++||+.+++.. .+ ..|
T Consensus 164 ---la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~-~~~- 236 (582)
T 3o4h_A 164 ---IAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL-ELP- 236 (582)
T ss_dssp ---EEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC-CCS-
T ss_pred ---EEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec-cCC-
Confidence 4444444 78999999987764 5666777889999999999999888888 8999999998876 33 455
Q ss_pred CcceEEEE--------EeeCCCeEEEEeCCCeEEEEEe
Q 016257 288 GTSIALVE--------FCPTQRVVLTASKEWGAMITKL 317 (392)
Q Consensus 288 ~~~i~~~~--------~s~~~~~l~~~~~dg~i~iw~~ 317 (392)
...+..++ |+|||.++++++.|+.+++|++
T Consensus 237 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 237 SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 55666666 9999998999999999999998
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=9e-23 Score=179.51 Aligned_cols=233 Identities=11% Similarity=0.031 Sum_probs=175.1
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEE-EeCCCcEEEEeCCCCce
Q 016257 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAA-GGVDGHLRIMHWPSLRI 146 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~ 146 (392)
.++++++++++++++.++.|++||+.+++....+... ....+..++|+|+++++++ ...++.|.+||+++++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~------~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP------DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS------SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC------CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 3567888889999999999999999887654443221 1124688999999987654 45689999999998887
Q ss_pred eecccCCC------CcEEEEEecCCCCeEEEEcCC------------CcEEEEECCCCee---eEEEecCCCcceEEEEe
Q 016257 147 ILDEPKAH------KSVLDMDFSLDSEFLATTSTD------------GSARIWKTEDGVA---WTFLTRNSDEKIELCRF 205 (392)
Q Consensus 147 ~~~~~~~~------~~i~~i~~~~~~~~l~~~~~d------------~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~ 205 (392)
...+.... ..+..++|+|+|+++++++.+ +.|.+||+.+++. +..+..+ ..+.+++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~ 155 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP--RQVYLMRA 155 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC--SSCCCEEE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC--CcccceeE
Confidence 65544322 237889999999999988865 8999999987443 3333332 25889999
Q ss_pred cCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC-----------------------------------------
Q 016257 206 SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR----------------------------------------- 244 (392)
Q Consensus 206 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~----------------------------------------- 244 (392)
+|+++ + +.++. .|.+||+++++.+..+....
T Consensus 156 s~dg~-l-----~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 227 (349)
T 1jmx_B 156 ADDGS-L-----YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPA 227 (349)
T ss_dssp CTTSC-E-----EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------C
T ss_pred CCCCc-E-----EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcc
Confidence 99998 2 22333 39999998877655443221
Q ss_pred ---------------------------CCcEEEEECC-CCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEE
Q 016257 245 ---------------------------KPASVLSISL-DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF 296 (392)
Q Consensus 245 ---------------------------~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 296 (392)
..+..++|+| ++++++++ ++.|.+||+.+++....+.. ...+.+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~ 302 (349)
T 1jmx_B 228 TADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL---DHTYYCVAF 302 (349)
T ss_dssp CCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC---SSCCCEEEE
T ss_pred ccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC---CCCccceEE
Confidence 1345677889 99999988 78999999999998776643 345789999
Q ss_pred eeCCCeEEEEeCCCeEEEEEeecCc
Q 016257 297 CPTQRVVLTASKEWGAMITKLTVPA 321 (392)
Q Consensus 297 s~~~~~l~~~~~dg~i~iw~~~~~~ 321 (392)
+|+|++|++++.++.|++|++...+
T Consensus 303 s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 303 DKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp CSSSSCEEEESBSSEEEEEETTTTE
T ss_pred CCCCCEEEEecCCCeEEEEeccccc
Confidence 9999999888889999999987554
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=1.5e-22 Score=195.49 Aligned_cols=279 Identities=13% Similarity=0.110 Sum_probs=189.6
Q ss_pred eeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCC---CeeEEEEcCCCCeEEEEeC
Q 016257 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEG---DPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~sp~~~~l~~~~~ 83 (392)
-.+++|+|++ .+++.+ .++.|.+|+.+. ......+.+|.. .+.+++|||||++|++++.
T Consensus 18 ~~~~~~s~dg---~~~~~~-------~d~~i~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~ 79 (719)
T 1z68_A 18 TFFPNWISGQ---EYLHQS-------ADNNIVLYNIET--------GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESD 79 (719)
T ss_dssp CCCCEESSSS---EEEEEC-------TTSCEEEEESSS--------CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEE
T ss_pred CCccEECCCC---eEEEEc-------CCCCEEEEEcCC--------CcEEEEEccccccccceeeEEECCCCCeEEEEec
Confidence 3478999998 355533 245677777652 233334444433 4899999999999998876
Q ss_pred ---------CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCC
Q 016257 84 ---------NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAH 154 (392)
Q Consensus 84 ---------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 154 (392)
++.|++||+.+++..... . ....+..++|||||+.|+++. ++.|++|++.+++........+
T Consensus 80 ~~~~~~~s~~~~i~~~d~~~g~~~~~~---~-----l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~ 150 (719)
T 1z68_A 80 YSKLWRYSYTATYYIYDLSNGEFVRGN---E-----LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGR 150 (719)
T ss_dssp EEECSSSCEEEEEEEEETTTTEECCSS---C-----CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCB
T ss_pred CceeEEeecceEEEEEECCCCccccce---e-----cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCC
Confidence 689999999887641100 0 124578899999999999986 7899999998887654332222
Q ss_pred -CcE-----------------EEEEecCCCCeEEEEcCCC----------------------------------cEEEEE
Q 016257 155 -KSV-----------------LDMDFSLDSEFLATTSTDG----------------------------------SARIWK 182 (392)
Q Consensus 155 -~~i-----------------~~i~~~~~~~~l~~~~~d~----------------------------------~i~vwd 182 (392)
..+ .+++|+|||++|++++.|. .|++||
T Consensus 151 ~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d 230 (719)
T 1z68_A 151 ENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIID 230 (719)
T ss_dssp TTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred cCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEE
Confidence 122 4899999999999887552 788999
Q ss_pred CCCCeee--EEEe-----cCCCcceEEEEecCCCCcceEEEEEEeC--CccEEEEEe----CCCceeeeee----cccCC
Q 016257 183 TEDGVAW--TFLT-----RNSDEKIELCRFSKDGTKPFLFCTVQRG--DKALLAVYD----ISTWNKIGHK----RLLRK 245 (392)
Q Consensus 183 ~~~~~~~--~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~d~~i~v~d----~~~~~~~~~~----~~~~~ 245 (392)
+.+++.. ..+. ..+...+..++|+||++. ++ ..... ....|.+|| ..+++..... ..+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~--~~-~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~ 307 (719)
T 1z68_A 231 TTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERV--CL-QWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTG 307 (719)
T ss_dssp SSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEE--EE-EEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSS
T ss_pred CCCCCccceeEccCCccCCCCcceEEEeEEeCCCeE--EE-EEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCc
Confidence 9887653 1221 124457899999999653 11 11122 235688999 8877766554 35555
Q ss_pred CcE-----EEEECCCCCEEEE--EeCCC--cEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCC-----Ce
Q 016257 246 PAS-----VLSISLDGKYLAM--GSKDG--DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKE-----WG 311 (392)
Q Consensus 246 ~v~-----~~~~s~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~ 311 (392)
.+. .+.|+|||+.++. ...+| .|.+||+.+++... + ..+ ...+..+.++ +++.|+..+.+ +.
T Consensus 308 ~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~-l-t~~-~~~v~~~~~~-d~~~i~~~~~~~~~~~~~ 383 (719)
T 1z68_A 308 WAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQ-I-TSG-KWEAINIFRV-TQDSLFYSSNEFEEYPGR 383 (719)
T ss_dssp CSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEE-C-SCS-SSCEEEEEEE-CSSEEEEEESCGGGCTTC
T ss_pred eEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEe-c-ccC-ceEEEEEEEE-eCCEEEEEEecCCCCCce
Confidence 665 7899999986554 44455 47777887766333 2 233 5567888877 88877766654 88
Q ss_pred EEEEEeec
Q 016257 312 AMITKLTV 319 (392)
Q Consensus 312 i~iw~~~~ 319 (392)
.++|.+..
T Consensus 384 ~~l~~~~~ 391 (719)
T 1z68_A 384 RNIYRISI 391 (719)
T ss_dssp BEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999875
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=2e-22 Score=172.78 Aligned_cols=223 Identities=13% Similarity=0.098 Sum_probs=164.7
Q ss_pred EeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC-CceeecccCCC-CcEE
Q 016257 81 STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS-LRIILDEPKAH-KSVL 158 (392)
Q Consensus 81 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~-~~i~ 158 (392)
++.++.|++||+.+++... +. .|...+.+++|+|++++|++++ ++.|++||+.+ ++.......+. ..+.
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~-------~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VW-------QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EE-------EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CCcceeEEEEeCCCCceee-ec-------cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence 4578899999998776432 21 2467899999999999999987 78999999998 77665554443 5788
Q ss_pred EEEecCCCCeEEEEc--CCCcEEEEEC--CCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC-
Q 016257 159 DMDFSLDSEFLATTS--TDGSARIWKT--EDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST- 233 (392)
Q Consensus 159 ~i~~~~~~~~l~~~~--~d~~i~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~- 233 (392)
+++|+|++++|++++ .++...+|.+ .+++ ...+..+ ..+..++|+|+++.+ ++++..++.+.+|+++.
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~--~~~~~~~~spdg~~l----~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN--LPSYWHGWSPDGKSF----TYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS--SSEEEEEECTTSSEE----EEEEEETTEEEEEEEETT
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC--CCccceEECCCCCEE----EEEECCCCceEEEEEECC
Confidence 999999999999988 3345555554 4443 3344333 248899999999962 33666788888888542
Q ss_pred ceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecC-CceeeeeeeccccCcceEEEEEeeCCCeEEEEeCC--
Q 016257 234 WNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVK-KMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKE-- 309 (392)
Q Consensus 234 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-- 309 (392)
......+..+...+.+++|+|++++|++++ .++.+++|++. .+.....+ ..+ ...+..++|+|+|++|++++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~-~~~-~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 162 SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI-TDS-AYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC-CCC-SEEEEEEEECTTSSEEEEEEEETT
T ss_pred CCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE-ecC-CcccCCeEECCCCCEEEEEEcCCC
Confidence 233345556677899999999999888776 58899999886 34333333 345 6789999999999999888766
Q ss_pred ---------CeEEEEEeecCc
Q 016257 310 ---------WGAMITKLTVPA 321 (392)
Q Consensus 310 ---------g~i~iw~~~~~~ 321 (392)
+.|++|++....
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCS
T ss_pred CCcccccCceEEEEEecCCCC
Confidence 568899887543
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=4.3e-21 Score=168.85 Aligned_cols=258 Identities=11% Similarity=0.079 Sum_probs=170.7
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEe-CC
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST-TN 84 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~d 84 (392)
....++|+|++. +++.+.. +.++.|.+|.++... ......+..+...+..++|+|+|++|++++ .+
T Consensus 41 ~p~~~a~spdg~---l~~~~~~----~~~~~v~~~~~~~g~------~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~ 107 (347)
T 3hfq_A 41 NPTYLALSAKDC---LYSVDKE----DDEGGIAAWQIDGQT------AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK 107 (347)
T ss_dssp CCCCEEECTTCE---EEEEEEE----TTEEEEEEEEEETTE------EEEEEEEEEESCCCSEEEEETTTTEEEEEETTT
T ss_pred CcceEEEccCCe---EEEEEec----CCCceEEEEEecCCc------EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC
Confidence 456688999874 3332211 124668888885321 112233445678899999999999998887 67
Q ss_pred CeEEEEEEeCCccceeeccccCC-----CCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC-CCceee--cccC-CCC
Q 016257 85 GGCKLFEVYGGATDINLLAKKMP-----PLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP-SLRIIL--DEPK-AHK 155 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~--~~~~-~~~ 155 (392)
+.+.+|++............... .......+.+++|+|+|+++++...++.|++|++. +++... .... ...
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 89999999643222111111100 00123458899999999966666678899999998 454321 1112 223
Q ss_pred cEEEEEecCCCCeEEE-EcCCCcEEEEECCC--Cee--eEEEecCCC-----cceEEEEecCCCCcceEEEEEEeCCccE
Q 016257 156 SVLDMDFSLDSEFLAT-TSTDGSARIWKTED--GVA--WTFLTRNSD-----EKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (392)
Q Consensus 156 ~i~~i~~~~~~~~l~~-~~~d~~i~vwd~~~--~~~--~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~d~~ 225 (392)
.+..++|+|||+++++ ...++.|.+|+++. ++. ...+..... ..+..++|+|+|+++ .++...++.
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l----~v~~~~~~~ 263 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFL----YVSNRGYNT 263 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEE----EEEEETTTE
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEE----EEEeCCCCE
Confidence 6788999999996665 56778999999874 443 222222211 358889999999962 245566899
Q ss_pred EEEEeCCC---ceeeeeecccCCCcEEEEECCCCCEEEEEeCC-CcEEEE--ecCCceeee
Q 016257 226 LAVYDIST---WNKIGHKRLLRKPASVLSISLDGKYLAMGSKD-GDICVV--DVKKMEINH 280 (392)
Q Consensus 226 i~v~d~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~iw--d~~~~~~~~ 280 (392)
|.+||+.. .+.+..+..+...+..++|+|||++|++++.+ +.|.+| |.+++++..
T Consensus 264 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 264 LAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 99999973 24444455555678899999999999888764 889999 555666554
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=9.9e-23 Score=184.04 Aligned_cols=206 Identities=12% Similarity=0.063 Sum_probs=153.5
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccc-------eeec-cccCCCCCCCCCeEEEEecCCCCEEE----EE
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD-------INLL-AKKMPPLQDAGPQKCLSFSVDGSRFA----AG 130 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~-------~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~----~~ 130 (392)
...++.+++++++.++++++.++ +++|+....... .... ......+.+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34688999999999999999888 899876432110 0000 00001123456899999999999999 78
Q ss_pred eCCCcEEEEeCCCC--------ce---eecccCCCCcEEEEEecCC-CCeEEEEcCCCcEEEEECCCCeeeEEEecCCCc
Q 016257 131 GVDGHLRIMHWPSL--------RI---ILDEPKAHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDE 198 (392)
Q Consensus 131 ~~dg~i~i~d~~~~--------~~---~~~~~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 198 (392)
+.|+.|++||++++ +. .....+|...|.+++|+|+ +.+|++++.||+|++||++++........ +..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~-~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP-STV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC-GGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC-CCC
Confidence 88999999998654 11 2334456679999999997 78999999999999999998866555544 345
Q ss_pred ceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeeccc-------CCCcEEEEECCCCCEEEEE-eCCCc---
Q 016257 199 KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLL-------RKPASVLSISLDGKYLAMG-SKDGD--- 267 (392)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~-~~dg~--- 267 (392)
.+.+++|+|++.. +++++.|+.|++||.+ ++....+..+ ...+.+++|++++.++++. +.||.
T Consensus 194 ~v~~v~wspdg~~-----lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 194 AVTSVCWSPKGKQ-----LAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp CEEEEEECTTSSC-----EEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred ceeEEEEcCCCCE-----EEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 7999999999998 7899999999999998 4444433322 2378999999988877553 34433
Q ss_pred ---EEEEecCCc
Q 016257 268 ---ICVVDVKKM 276 (392)
Q Consensus 268 ---i~iwd~~~~ 276 (392)
+++|++++.
T Consensus 268 ~~~v~i~~l~~~ 279 (434)
T 2oit_A 268 SPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEEECCCT
T ss_pred CCceEEEEeccC
Confidence 899999864
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=2.7e-21 Score=171.32 Aligned_cols=270 Identities=9% Similarity=0.038 Sum_probs=181.4
Q ss_pred CceeEEEEcCCCCccccCCceEEEe-eCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEe-CCccceeeccccCCCCCCC
Q 016257 35 SVLEIFSFDPKTTSVYTSPLVTYVF-DESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVY-GGATDINLLAKKMPPLQDA 112 (392)
Q Consensus 35 ~~i~i~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~~~~~~~~ 112 (392)
+.|.+|.++..+..+.. .... .++...+..++|+|+|++|++++.+ .|.+|++. +++..... ... ..
T Consensus 14 ~~i~~~~~d~~~g~l~~----~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~-~~~-----~~ 82 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKL----IKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA-SHP-----IG 82 (365)
T ss_dssp CEEEEEEEETTTTEEEE----EEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE-EEE-----CC
T ss_pred CcEEEEEEECCCCCEEE----eeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee-Eee-----cC
Confidence 35888888765543311 1111 1234578899999999999998888 89999997 65432211 111 01
Q ss_pred CCeEEEEecCCCCE--EEEEe-------------CCCcEEEEeCC-CCceeeccc----CCCCcEEEEEecCCCCeEEEE
Q 016257 113 GPQKCLSFSVDGSR--FAAGG-------------VDGHLRIMHWP-SLRIILDEP----KAHKSVLDMDFSLDSEFLATT 172 (392)
Q Consensus 113 ~~v~~~~~s~~~~~--l~~~~-------------~dg~i~i~d~~-~~~~~~~~~----~~~~~i~~i~~~~~~~~l~~~ 172 (392)
+.+..++|+|||++ ++++. .++.+.+|++. +++...... .+...+.+++|+|||++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 23556899999994 44543 68999999997 455432222 233578999999999988876
Q ss_pred c-CCCcEEEEECC-CCeee--EEEecC-CCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCC--Cceee---eeecc
Q 016257 173 S-TDGSARIWKTE-DGVAW--TFLTRN-SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS--TWNKI---GHKRL 242 (392)
Q Consensus 173 ~-~d~~i~vwd~~-~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~--~~~~~---~~~~~ 242 (392)
. .++.|++||+. +++.. ..+... +...+..++|+|+++.+ .++...++.|.+|+++ +++.. ..+..
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l----~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 238 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYL----YALMEAGNRICEYVIDPATHMPVYTHHSFPL 238 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEE----EEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEE----EEEECCCCeEEEEEEeCCCCcEEEccceEEc
Confidence 5 36789999998 66543 233322 23468999999999862 2344457899999765 44432 11111
Q ss_pred -------cCC------CcEEEE-ECCCCCEEEEEeCCC------cEEEEecC-Cceeeeee--eccccCcceEEEEEee-
Q 016257 243 -------LRK------PASVLS-ISLDGKYLAMGSKDG------DICVVDVK-KMEINHWS--KRLHLGTSIALVEFCP- 298 (392)
Q Consensus 243 -------~~~------~v~~~~-~s~~~~~l~~~~~dg------~i~iwd~~-~~~~~~~~--~~~~~~~~i~~~~~s~- 298 (392)
+.. .+..++ |+|||++|++++.+. .|.+|++. +++..... ...+ ...+..++|+|
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~-~~~~~~~a~sp~ 317 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP-TSGGHSNAVSPC 317 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS-SCCTTCCCEEEC
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC-CCCcccceecCC
Confidence 111 478899 999999988776432 79999996 56644321 1223 44567899999
Q ss_pred --CCCeEEEEeCC-CeEEEEEeecC
Q 016257 299 --TQRVVLTASKE-WGAMITKLTVP 320 (392)
Q Consensus 299 --~~~~l~~~~~d-g~i~iw~~~~~ 320 (392)
||++|++++.+ +.|++|++...
T Consensus 318 ~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 318 PWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999998864 89999999854
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=1.6e-20 Score=166.09 Aligned_cols=275 Identities=13% Similarity=0.148 Sum_probs=179.4
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEe-CC
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST-TN 84 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~d 84 (392)
....++|+|++.. +++.+.. ...++.+.+|.++..+..+ ........+...+..+++ ++++|++++ .+
T Consensus 51 ~p~~l~~spdg~~--l~~~~~~---~~~~~~v~~~~~~~~~g~~----~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~ 119 (361)
T 3scy_A 51 NPSYLIPSADGKF--VYSVNEF---SKDQAAVSAFAFDKEKGTL----HLLNTQKTMGADPCYLTT--NGKNIVTANYSG 119 (361)
T ss_dssp CCCSEEECTTSSE--EEEEECC---SSTTCEEEEEEEETTTTEE----EEEEEEECSSSCEEEEEE--CSSEEEEEETTT
T ss_pred CCceEEECCCCCE--EEEEEcc---CCCCCcEEEEEEeCCCCcE----EEeeEeccCCCCcEEEEE--CCCEEEEEECCC
Confidence 4566899999854 2222221 1124679999998654322 122233445567788888 888777776 57
Q ss_pred CeEEEEEEeCCccceeeccc-------cCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCCCCce----------
Q 016257 85 GGCKLFEVYGGATDINLLAK-------KMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRI---------- 146 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~---------- 146 (392)
+.+.+|++............ .....++...+.+++|+|+|++|++++ .++.|++|++.....
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec
Confidence 89999999754432221110 000112234568899999999776655 478999998875431
Q ss_pred ---eecccCCCCcEEEEEecCCCCeEEEEc-CCCcEEEEECCCCee--eEEEecC--CCcceEEEEecCCCCcceEEEEE
Q 016257 147 ---ILDEPKAHKSVLDMDFSLDSEFLATTS-TDGSARIWKTEDGVA--WTFLTRN--SDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 147 ---~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~vwd~~~~~~--~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
.............++|+|+|+++++++ .++.|.+|++++++. +..+... .......++|+|+++++ .+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l----~v 275 (361)
T 3scy_A 200 GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYL----YA 275 (361)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEE----EE
T ss_pred ccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEE----EE
Confidence 111223344678999999999887766 689999999987654 2223221 12346799999999972 24
Q ss_pred EeCC-ccEEEEEeCC--Cce--eeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEE--ecCCceeeeeeeccccCcc
Q 016257 219 QRGD-KALLAVYDIS--TWN--KIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVV--DVKKMEINHWSKRLHLGTS 290 (392)
Q Consensus 219 ~~~~-d~~i~v~d~~--~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~ 290 (392)
+... ++.|.+|++. +++ .+..+.. ...+..++|+|+|++|++++ .++.|.+| |..+++........+ ...
T Consensus 276 ~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-~~~ 353 (361)
T 3scy_A 276 SNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIK-VDK 353 (361)
T ss_dssp EECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEE-CSS
T ss_pred ECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeee-CCC
Confidence 4444 6899999986 333 3333333 55778999999999998887 56889996 555777665443334 567
Q ss_pred eEEEEEe
Q 016257 291 IALVEFC 297 (392)
Q Consensus 291 i~~~~~s 297 (392)
+.|+.|.
T Consensus 354 p~~v~~~ 360 (361)
T 3scy_A 354 PVCLKFV 360 (361)
T ss_dssp EEEEEEE
T ss_pred CeEEEEc
Confidence 8899886
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=3.9e-22 Score=178.21 Aligned_cols=286 Identities=10% Similarity=0.028 Sum_probs=185.3
Q ss_pred ecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEE
Q 016257 10 GSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKL 89 (392)
Q Consensus 10 ~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~i 89 (392)
.+|+||++++.+.. . .++..++|.++..+.. ......++...+..+.|+|||+.|++++.++.+++
T Consensus 41 ~~~SpDg~~l~~~~---~-----~~g~~~l~~~d~~~g~------~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (388)
T 3pe7_A 41 KCFTRDGSKLLFGG---A-----FDGPWNYYLLDLNTQV------ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMR 106 (388)
T ss_dssp CCBCTTSCEEEEEE---C-----TTSSCEEEEEETTTCE------EEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEE
T ss_pred ccCCCCCCEEEEEE---c-----CCCCceEEEEeCCCCc------eEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEE
Confidence 78999997633332 2 1334567777755432 23334556666667889999999999999999999
Q ss_pred EEEeCCccceeeccccCCCCCCCCCeEEE--EecCCCCEEEEEe----------------------CCCcEEEEeCCCCc
Q 016257 90 FEVYGGATDINLLAKKMPPLQDAGPQKCL--SFSVDGSRFAAGG----------------------VDGHLRIMHWPSLR 145 (392)
Q Consensus 90 w~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~l~~~~----------------------~dg~i~i~d~~~~~ 145 (392)
||+.+++....... +...+... .+++++++++... .+..|++||+.+++
T Consensus 107 ~d~~~g~~~~~~~~-------~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 107 VDLATLEENVVYQV-------PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp EETTTCCEEEEEEC-------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred EECCCCcceeeeec-------hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 99988764332211 12233333 3489999887432 34679999999886
Q ss_pred eeecccCCCCcEEEEEecC-CCCeEEEEcCC------CcEEEEECCCCeeeEEEecCCC-cceEEEEecCCCCcceEEEE
Q 016257 146 IILDEPKAHKSVLDMDFSL-DSEFLATTSTD------GSARIWKTEDGVAWTFLTRNSD-EKIELCRFSKDGTKPFLFCT 217 (392)
Q Consensus 146 ~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~ 217 (392)
.. .+..+...+..+.|+| ||+.|+.+..+ ..|.++|+..++. ..+..+.. ..+..++|+|||+.+++...
T Consensus 180 ~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 180 ST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp EE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred eE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEec
Confidence 54 3444555789999999 99988877653 3788888765443 34433332 35788999999997422111
Q ss_pred EEeCCccEEEEEeCCCceeeeeecccC-----CCcEEEEECCCCCEEEEE---------eCCCcEEEEecCCceeeeeee
Q 016257 218 VQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMG---------SKDGDICVVDVKKMEINHWSK 283 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~---------~~dg~i~iwd~~~~~~~~~~~ 283 (392)
-.+..+..|++||+.+++......... .....+.|+|||+.|+.. ..+..|++||+.+++.....
T Consensus 258 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~- 336 (388)
T 3pe7_A 258 LKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVA- 336 (388)
T ss_dssp ETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEE-
T ss_pred CCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEec-
Confidence 111123359999999886432211111 001123799999988754 44568999999998765443
Q ss_pred ccccCc-----------ceEEEEEeeCCCeEEEEe-CCCeEEEEEeecCc
Q 016257 284 RLHLGT-----------SIALVEFCPTQRVVLTAS-KEWGAMITKLTVPA 321 (392)
Q Consensus 284 ~~~~~~-----------~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~ 321 (392)
.+ .. .+..++|+|||+.|+..+ .+|...||.++...
T Consensus 337 -~~-~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 337 -RH-DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp -EC-CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred -cc-cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 22 23 478899999999877665 57888888887554
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=3e-22 Score=193.40 Aligned_cols=276 Identities=11% Similarity=0.035 Sum_probs=182.2
Q ss_pred eEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC---------CCcEE
Q 016257 67 MTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV---------DGHLR 137 (392)
Q Consensus 67 ~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~ 137 (392)
..++|+|+|+++++ +.|+.|++||+.+++....+..... ....+.+++|||||++|++++. ++.|+
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTM----KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHH----HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccc----cccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 37899999965554 5799999999988875433321110 0124789999999999998876 68999
Q ss_pred EEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcc-----------------e
Q 016257 138 IMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEK-----------------I 200 (392)
Q Consensus 138 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~-----------------v 200 (392)
+||+++++.+... .....+..++|||||+.|+++. ++.|++||+.+++........+... .
T Consensus 94 ~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 94 IYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp EEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred EEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 9999988762111 1124688899999999999886 6899999998887654332222111 2
Q ss_pred EEEEecCCCCcceEEEEEEeCCc----------------------------------cEEEEEeCCCceee--------e
Q 016257 201 ELCRFSKDGTKPFLFCTVQRGDK----------------------------------ALLAVYDISTWNKI--------G 238 (392)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~d----------------------------------~~i~v~d~~~~~~~--------~ 238 (392)
.+++|+|||+. ++.++.| ..|.+||+.+++.. .
T Consensus 172 ~~~~wSPDG~~-----la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 246 (719)
T 1z68_A 172 YALWWSPNGKF-----LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA 246 (719)
T ss_dssp CCEEECTTSSE-----EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH
T ss_pred ccEEECCCCCE-----EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc
Confidence 48999999997 3333322 28899999987642 1
Q ss_pred eecccCCCcEEEEECCCCCEEEEEeCC----CcEEEEe----cCCceeeeeee---ccccCcceE-----EEEEeeCCCe
Q 016257 239 HKRLLRKPASVLSISLDGKYLAMGSKD----GDICVVD----VKKMEINHWSK---RLHLGTSIA-----LVEFCPTQRV 302 (392)
Q Consensus 239 ~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd----~~~~~~~~~~~---~~~~~~~i~-----~~~~s~~~~~ 302 (392)
.+..+...+..++||||++++++.... ..|.+|| +.+++...... ..| ...+. .+.|+|||+.
T Consensus 247 ~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 247 MIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESR-TGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp HHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECS-SSCSSSSSCCCCEECTTSSC
T ss_pred cCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccC-CceEccccCCccEECCCCCe
Confidence 123466678999999998877775433 2488899 88887665552 355 55565 8899999996
Q ss_pred EEE--EeCCCeEEEE--EeecCcccc----ceeeeeeeeeeeeeceEEEEeeec-----ceeeeecccc
Q 016257 303 VLT--ASKEWGAMIT--KLTVPADWK----EWQIYSLLLALFLASAVVFYIFFE-----NSDSFWNFPV 358 (392)
Q Consensus 303 l~~--~~~dg~i~iw--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d-----~~i~~W~~~~ 358 (392)
|+. ...+|...|| ++....... .+.+. .+. .. ....+++.+.+ +..++|.+..
T Consensus 326 l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~-~~~-~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 326 YYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAI-NIF-RV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEE-EEE-EE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEEEccCCceEEEEEECCCCceEecccCceEEE-EEE-EE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 554 5566655555 443332111 11111 111 11 34445555443 7799999875
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=2.6e-22 Score=181.29 Aligned_cols=200 Identities=15% Similarity=0.129 Sum_probs=151.3
Q ss_pred CCeEEEEecCCCCEEEEEeCCCcEEEEeCCCC----------ceeec-----ccCCCCcEEEEEecCCCCeEE----EEc
Q 016257 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL----------RIILD-----EPKAHKSVLDMDFSLDSEFLA----TTS 173 (392)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~----------~~~~~-----~~~~~~~i~~i~~~~~~~~l~----~~~ 173 (392)
..++.+++++++.++++++.++ +++|+.... ..... ...+...|.+++|+|++++|+ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 3578899999999999999888 888875311 00100 112334699999999999999 788
Q ss_pred CCCcEEEEECCCC--------eeeEEE--ecCCCcceEEEEecCC-CCcceEEEEEEeCCccEEEEEeCCCceeeeeecc
Q 016257 174 TDGSARIWKTEDG--------VAWTFL--TRNSDEKIELCRFSKD-GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (392)
Q Consensus 174 ~d~~i~vwd~~~~--------~~~~~~--~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~ 242 (392)
.|+.|++||++++ +.+..+ ...|...|.+++|+|+ +.. +++++.|+.|++||++++........
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~-----las~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM-----VAVCLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE-----EEEEETTSCEEEEEESSSEEEEEEEC
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE-----EEEEECCCeEEEEEcCCCcceeeccC
Confidence 8999999998764 222222 2234568999999998 554 78899999999999999877666667
Q ss_pred cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec------cccCcceEEEEEeeCCCeEEE-EeCCC-----
Q 016257 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR------LHLGTSIALVEFCPTQRVVLT-ASKEW----- 310 (392)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~i~~~~~s~~~~~l~~-~~~dg----- 310 (392)
|...+++++|+|+|++|++|+.||.|++||++ ++....+.. .| ...|.+++|++++.++++ .+.||
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~-~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDH-PVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTS-CEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCC-ceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 78899999999999999999999999999998 443333211 12 348999999999887755 33443
Q ss_pred -eEEEEEeecC
Q 016257 311 -GAMITKLTVP 320 (392)
Q Consensus 311 -~i~iw~~~~~ 320 (392)
.+++|++...
T Consensus 269 ~~v~i~~l~~~ 279 (434)
T 2oit_A 269 PDVVMALLPKK 279 (434)
T ss_dssp CEEEEEECCCT
T ss_pred CceEEEEeccC
Confidence 3899999855
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=1.2e-20 Score=165.96 Aligned_cols=246 Identities=15% Similarity=0.058 Sum_probs=169.4
Q ss_pred eecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCC-CCeeEEEEcCCCCeEE-EEeCCCe
Q 016257 9 CGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESE-GDPMTIAVNPSGDDFV-CSTTNGG 86 (392)
Q Consensus 9 ~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~l~-~~~~d~~ 86 (392)
.+++++++ .++++++. ++.|.+|+.+ .......+..+. ..+..++|+|++++++ ++..++.
T Consensus 4 g~~~~~~~---~~~v~~~~------~~~v~~~d~~--------~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~ 66 (349)
T 1jmx_B 4 GPALKAGH---EYMIVTNY------PNNLHVVDVA--------SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 66 (349)
T ss_dssp CCCCCTTC---EEEEEEET------TTEEEEEETT--------TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTE
T ss_pred cccccCCC---EEEEEeCC------CCeEEEEECC--------CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCc
Confidence 46777765 34444333 4567777654 222333344332 2688999999998665 4456889
Q ss_pred EEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC------------CcEEEEeCCCCceeec--ccC
Q 016257 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD------------GHLRIMHWPSLRIILD--EPK 152 (392)
Q Consensus 87 i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~--~~~ 152 (392)
|.+||+.+++....+...... ......+..++|+|+|++|++++.+ +.|.+||+++++.... ...
T Consensus 67 i~~~d~~t~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 145 (349)
T 1jmx_B 67 IYGIDLDTCKNTFHANLSSVP-GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 145 (349)
T ss_dssp EEEEETTTTEEEEEEESCCST-TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE
T ss_pred EEEEeCCCCcEEEEEEccccc-ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc
Confidence 999999877654433211100 0002236889999999999998865 8999999987543221 122
Q ss_pred CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCC------------------------------------
Q 016257 153 AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS------------------------------------ 196 (392)
Q Consensus 153 ~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~------------------------------------ 196 (392)
+...+.+++|+|+++ +++++ +.|++||+.+++....+..+.
T Consensus 146 ~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 146 MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDD 222 (349)
T ss_dssp CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCC
Confidence 334688899999999 66554 349999999888776654321
Q ss_pred -------------------------------CcceEEEEecC-CCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC
Q 016257 197 -------------------------------DEKIELCRFSK-DGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR 244 (392)
Q Consensus 197 -------------------------------~~~v~~~~~~~-~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~ 244 (392)
...+..++|+| +++. ++++ ++.|.+||+++++.+..+.. .
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~-----l~~~--~~~v~~~d~~~~~~~~~~~~-~ 294 (349)
T 1jmx_B 223 KQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ-----IYGV--LNRLAKYDLKQRKLIKAANL-D 294 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE-----EEEE--ESEEEEEETTTTEEEEEEEC-S
T ss_pred cCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCE-----EEEE--cCeEEEEECccCeEEEEEcC-C
Confidence 01244667778 8886 3333 88999999999887766653 3
Q ss_pred CCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeee
Q 016257 245 KPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK 283 (392)
Q Consensus 245 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 283 (392)
..+.+++|+|+|++|++++.++.|++||+++++.+..+.
T Consensus 295 ~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 295 HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence 456789999999998888889999999999998877663
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=8.5e-21 Score=183.51 Aligned_cols=250 Identities=8% Similarity=-0.042 Sum_probs=167.5
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC---------C
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD---------G 134 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------g 134 (392)
....++.|+|||++++++ |++|++||+.+++....+...... ........++|||||++|+.++.+ +
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD--EFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT--TCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhh--hhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 346689999999888886 899999999888754333222111 112233568999999999998875 5
Q ss_pred cEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCc----------------
Q 016257 135 HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDE---------------- 198 (392)
Q Consensus 135 ~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~---------------- 198 (392)
.+.+||+++++.. .+..+...+...+|||||+.||.+. ++.|++|++.+++..+........
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 6779999998754 4555667899999999999999885 689999999887754322212111
Q ss_pred -ceEEEEecCCCCcceEEEEEE-----------e--------------------CCccEEEEEeCCC---ce--eeeeec
Q 016257 199 -KIELCRFSKDGTKPFLFCTVQ-----------R--------------------GDKALLAVYDIST---WN--KIGHKR 241 (392)
Q Consensus 199 -~v~~~~~~~~~~~~~~~~~~~-----------~--------------------~~d~~i~v~d~~~---~~--~~~~~~ 241 (392)
....+.|||||+.+.+...-. . .....|.+||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 123589999999743211000 0 0112689999998 73 122222
Q ss_pred ------ccCCCcEEEEECCCCCEEEEEeC----CCcEEEEecCCce----ee---eeeeccccCcceE-----EEEEeeC
Q 016257 242 ------LLRKPASVLSISLDGKYLAMGSK----DGDICVVDVKKME----IN---HWSKRLHLGTSIA-----LVEFCPT 299 (392)
Q Consensus 242 ------~~~~~v~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~~----~~---~~~~~~~~~~~i~-----~~~~s~~ 299 (392)
.+...+..++|+|||+.++.... +..|++||+.+++ +. ..+...+ ...+. .++|+||
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~-~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST-TGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS-SSCSSSSSCCCCEECTT
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC-CceEccCcCCCceEcCC
Confidence 25667889999999997665543 2369999999887 22 2222334 44443 7899999
Q ss_pred CCeEE-EEe-CCC--eEEEEEeecC
Q 016257 300 QRVVL-TAS-KEW--GAMITKLTVP 320 (392)
Q Consensus 300 ~~~l~-~~~-~dg--~i~iw~~~~~ 320 (392)
|+.|+ ..+ .+| .|++|++...
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCS
T ss_pred CCEEEEEEEcCCCceEEEEEECCCC
Confidence 99876 665 444 5666665543
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=3.8e-20 Score=178.94 Aligned_cols=282 Identities=12% Similarity=0.099 Sum_probs=183.7
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCC-----eeEEEEcCCCCeEE
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGD-----PMTIAVNPSGDDFV 79 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~sp~~~~l~ 79 (392)
....+++|+|++ .+++.+ ++.|.+|+++. ......+.+|... ...+.|||||++|+
T Consensus 17 ~~~~~~~w~~dg---~~~~~~--------~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~ 77 (740)
T 4a5s_A 17 LKLYSLRWISDH---EYLYKQ--------ENNILVFNAEY--------GNSSVFLENSTFDEFGHSINDYSISPDGQFIL 77 (740)
T ss_dssp CCCCCEEECSSS---EEEEEE--------TTEEEEEETTT--------CCEEEEECTTTTTTCCSCCCEEEECTTSSEEE
T ss_pred ccccccEECCCC---cEEEEc--------CCcEEEEECCC--------CceEEEEechhhhhhcccccceEECCCCCEEE
Confidence 457789999998 456643 45577777652 2233446666533 24488999999999
Q ss_pred EEeCC---------CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecc
Q 016257 80 CSTTN---------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150 (392)
Q Consensus 80 ~~~~d---------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 150 (392)
.++.+ +.+.+||+.+++... + ..+...+...+|||||+.|+.+. ++.|++|++.+++.....
T Consensus 78 ~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l-------~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt 148 (740)
T 4a5s_A 78 LEYNYVKQWRHSYTASYDIYDLNKRQLIT-E-------ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRIT 148 (740)
T ss_dssp EEEEEEECSSSCEEEEEEEEETTTTEECC-S-------SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC
T ss_pred EEECCeeeEEEccceEEEEEECCCCcEEE-c-------ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEc
Confidence 98875 567799998876321 1 12456799999999999999885 789999999887755432
Q ss_pred cCCC-CcE-----------------EEEEecCCCCeEEEEcCCC------------------------------------
Q 016257 151 PKAH-KSV-----------------LDMDFSLDSEFLATTSTDG------------------------------------ 176 (392)
Q Consensus 151 ~~~~-~~i-----------------~~i~~~~~~~~l~~~~~d~------------------------------------ 176 (392)
.... ..+ ..+.|||||+.|+.++.|.
T Consensus 149 ~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~ 228 (740)
T 4a5s_A 149 WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTV 228 (740)
T ss_dssp SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEE
T ss_pred CCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCee
Confidence 2222 222 2489999999999875321
Q ss_pred cEEEEECCC---Ce--eeEEEec-----CCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCce----eee--ee
Q 016257 177 SARIWKTED---GV--AWTFLTR-----NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN----KIG--HK 240 (392)
Q Consensus 177 ~i~vwd~~~---~~--~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~----~~~--~~ 240 (392)
+|++||+.+ ++ ....+.. .+...+..++|+||++. +++.+...+.+..|.+||+.+++ +.. .+
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~-~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERI-SLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEE-EEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeE-EEEEeCCCCCEEEEEEEECCCCccccceeEEEEe
Confidence 478899987 63 2233332 14557899999999984 22222223456689999999876 221 11
Q ss_pred --cccCCCcE-----EEEECCCCCEEE-EEeC-CC--cEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEE-EEeC
Q 016257 241 --RLLRKPAS-----VLSISLDGKYLA-MGSK-DG--DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVL-TASK 308 (392)
Q Consensus 241 --~~~~~~v~-----~~~~s~~~~~l~-~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~ 308 (392)
..+...+. .++|+|||+.|+ ..+. +| .|++||+.+++..... .+ ...+..+.. +|++.|+ +++.
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT-~g--~~~v~~~~~-~d~~~i~f~~~~ 383 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT-KG--TWEVIGIEA-LTSDYLYYISNE 383 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC-CS--SSCEEEEEE-ECSSEEEEEESC
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecc-cC--CEEEEEEEE-EeCCEEEEEEec
Confidence 33444443 689999999877 6653 33 5888898877665543 22 345555542 4466554 4444
Q ss_pred ----CCeEEEEEeec
Q 016257 309 ----EWGAMITKLTV 319 (392)
Q Consensus 309 ----dg~i~iw~~~~ 319 (392)
.+...||.++.
T Consensus 384 ~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 384 YKGMPGGRNLYKIQL 398 (740)
T ss_dssp GGGCTTCBEEEEEET
T ss_pred CCCCCceeEEEEEEC
Confidence 24566666653
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=6.3e-20 Score=163.87 Aligned_cols=253 Identities=9% Similarity=-0.051 Sum_probs=163.3
Q ss_pred EEeeCCCCCeeE-----EEEcCCCCeEEEEeC-CCe--EEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEE
Q 016257 57 YVFDESEGDPMT-----IAVNPSGDDFVCSTT-NGG--CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA 128 (392)
Q Consensus 57 ~~~~~h~~~v~~-----~~~sp~~~~l~~~~~-d~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 128 (392)
..+..|...... .+|+|||++|++++. ++. |.+||+.+++...... .+...+..+.|+|||+.|+
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-------~~~~~~~~~~~spdg~~l~ 96 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-------GRGDNTFGGFLSPDDDALF 96 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC-------SSCBCSSSCEECTTSSEEE
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee-------CCCCCccceEEcCCCCEEE
Confidence 445566655555 889999999998887 664 7777776665322111 1223344678999999999
Q ss_pred EEeCCCcEEEEeCCCCceeecccCCCCcEEEEE--ecCCCCeEEEE----------------------cCCCcEEEEECC
Q 016257 129 AGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMD--FSLDSEFLATT----------------------STDGSARIWKTE 184 (392)
Q Consensus 129 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~--~~~~~~~l~~~----------------------~~d~~i~vwd~~ 184 (392)
.++.++.|++||+.+++.......+...+.... ++|++++++.. ..+..|.+||+.
T Consensus 97 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 97 YVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred EEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 999999999999999887654444444443333 48999988742 234679999999
Q ss_pred CCeeeEEEecCCCcceEEEEecC-CCCcceEEEEEEeCC---ccEEEEEeCCCceeeeeecccC--CCcEEEEECCCCCE
Q 016257 185 DGVAWTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGD---KALLAVYDISTWNKIGHKRLLR--KPASVLSISLDGKY 258 (392)
Q Consensus 185 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~---d~~i~v~d~~~~~~~~~~~~~~--~~v~~~~~s~~~~~ 258 (392)
+++...... + ...+..++|+| +++.+.+ ...... ...|.++|...++.. .+..+. ..+..++|+|||+.
T Consensus 177 ~g~~~~l~~-~-~~~~~~~~~sp~dg~~l~~--~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 177 TGESTVILQ-E-NQWLGHPIYRPYDDSTVAF--CHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp TCCEEEEEE-E-SSCEEEEEEETTEEEEEEE--EECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSC
T ss_pred CCceEEeec-C-CccccccEECCCCCCEEEE--EEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCE
Confidence 886554443 2 23688999999 9886321 111111 347888888765443 333333 24778899999997
Q ss_pred EEEEeC-CC----cEEEEecCCceeeeeee-ccc--cCcceEEEEEeeCCCeEEEE---------eCCCeEEEEEeecCc
Q 016257 259 LAMGSK-DG----DICVVDVKKMEINHWSK-RLH--LGTSIALVEFCPTQRVVLTA---------SKEWGAMITKLTVPA 321 (392)
Q Consensus 259 l~~~~~-dg----~i~iwd~~~~~~~~~~~-~~~--~~~~i~~~~~s~~~~~l~~~---------~~dg~i~iw~~~~~~ 321 (392)
|+..+. ++ .|++||+.+++...... ..+ .......+.|+|||+.|+.. ..+..|++|++....
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 766443 22 39999999987543321 110 00011223799999987754 456689999987543
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=2.8e-18 Score=146.52 Aligned_cols=247 Identities=11% Similarity=0.052 Sum_probs=175.3
Q ss_pred CCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEe-cCCCCEEEEEeC-CCcEEE
Q 016257 61 ESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF-SVDGSRFAAGGV-DGHLRI 138 (392)
Q Consensus 61 ~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~-dg~i~i 138 (392)
++-..+.+++++|+++++++...++.|.+||.. ++....+.. ......+...+..+++ .++++++++... ++.|++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~-~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGE-CGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECC-BSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecc-cCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 455679999999999988887888999999976 332222211 1111123356889999 467766666533 789999
Q ss_pred EeCCCCceeecccC-CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEec-CCCcceEEEEecCCCCcceEEE
Q 016257 139 MHWPSLRIILDEPK-AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR-NSDEKIELCRFSKDGTKPFLFC 216 (392)
Q Consensus 139 ~d~~~~~~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~ 216 (392)
|| .+++.+..+.. +...+.+++++|+++++++...++.|.+||. +++.+..+.. .....+..+++++++..
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l----- 177 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEI----- 177 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEE-----
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCE-----
Confidence 99 56665544432 2346899999999998888778899999996 4555555542 22235889999999873
Q ss_pred EEEeCCccEEEEEeCCCceeeeeeccc--CCCcEEEEECCCCCEEEEEeCCC-cEEEEecCCceeeeeeeccccCcceEE
Q 016257 217 TVQRGDKALLAVYDISTWNKIGHKRLL--RKPASVLSISLDGKYLAMGSKDG-DICVVDVKKMEINHWSKRLHLGTSIAL 293 (392)
Q Consensus 217 ~~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~i~~ 293 (392)
.++...++.|.+||... +.+..+... ...+..++++++|+++++...++ .|.+||.. ++.+..+........+.+
T Consensus 178 ~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFD 255 (286)
T ss_dssp EEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEE
T ss_pred EEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCccee
Confidence 46666789999999854 444444332 25688999999999888887775 99999964 444444432221335789
Q ss_pred EEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 294 VEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 294 ~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
++++|+|+++++ +.|+.|++|++..
T Consensus 256 i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EEECCCCcEEEE-CCCCeEEEEEccc
Confidence 999999987776 6799999999864
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=3.5e-20 Score=165.90 Aligned_cols=284 Identities=11% Similarity=0.034 Sum_probs=178.8
Q ss_pred eeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCC-eeEEEEcCCCCeEEEEeCCC
Q 016257 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGD-PMTIAVNPSGDDFVCSTTNG 85 (392)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~sp~~~~l~~~~~d~ 85 (392)
+.+++|+|+++++.++... ++...+|.++..+... . .+..+... ...+.|+|||+.|+.++.++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~--------~g~~~l~~~d~~~~~~------~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF--------DGNRNYYLLNLETQQA------V-QLTEGKGDNTFGGFISTDERAFFYVKNEL 102 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT--------TSSCEEEEEETTTTEE------E-ECCCSSCBCTTTCEECTTSSEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEec--------CCCceEEEEECCCCcE------E-EeecCCCCccccceECCCCCEEEEEEcCC
Confidence 6788999999763333311 1223456666443221 1 22223333 33488999999999999999
Q ss_pred eEEEEEEeCCccceeeccccCCCCCCCCCeEE-------------------EEecCCCCEEEEE-----eCCCcEEEEeC
Q 016257 86 GCKLFEVYGGATDINLLAKKMPPLQDAGPQKC-------------------LSFSVDGSRFAAG-----GVDGHLRIMHW 141 (392)
Q Consensus 86 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~s~~~~~l~~~-----~~dg~i~i~d~ 141 (392)
.|++|++.+++........ ...... +.|+|+++.++.. ..+..|++||+
T Consensus 103 ~l~~~d~~~~~~~~~~~~~-------~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~ 175 (396)
T 3c5m_A 103 NLMKVDLETLEEQVIYTVD-------EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDI 175 (396)
T ss_dssp EEEEEETTTCCEEEEEECC-------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEET
T ss_pred cEEEEECCCCCcEEEEecc-------cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEEC
Confidence 9999998776532222110 111111 3567888776654 35668999999
Q ss_pred CCCceeecccCCCCcEEEEEecC-CCCeEEEEcCC------CcEEEEECCCCeeeEEEecCC-CcceEEEEecCCCCcce
Q 016257 142 PSLRIILDEPKAHKSVLDMDFSL-DSEFLATTSTD------GSARIWKTEDGVAWTFLTRNS-DEKIELCRFSKDGTKPF 213 (392)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~ 213 (392)
.+++.... ..+...+..+.|+| +++.|+..+.+ ..|.+||+..++. ..+..+. ...+..++|+|+++.++
T Consensus 176 ~~g~~~~~-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 176 ETGELEVI-HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMA 253 (396)
T ss_dssp TTCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEE
T ss_pred CCCcEEee-ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEE
Confidence 88776433 34455789999999 78877766543 3688899865543 3333222 33578899999999732
Q ss_pred EEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECC-CCCEEEEEe----------------CCCcEEEEecCCc
Q 016257 214 LFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISL-DGKYLAMGS----------------KDGDICVVDVKKM 276 (392)
Q Consensus 214 ~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~----------------~dg~i~iwd~~~~ 276 (392)
+...-.+...+.|++||+.+++....... . ... +.|+| +|+++++++ .+..|++||+.++
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 254 YVSYFKGQTDRVIYKANPETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEEETTTCCEEEEEECTTTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred EEecCCCCccceEEEEECCCCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 21100111225699999988765432221 1 233 89999 999888754 2467999999888
Q ss_pred eeeeeeeccccCc-----------ceEEEEEeeCCCeEEEEeC-CCeEEEEEeecC
Q 016257 277 EINHWSKRLHLGT-----------SIALVEFCPTQRVVLTASK-EWGAMITKLTVP 320 (392)
Q Consensus 277 ~~~~~~~~~~~~~-----------~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~ 320 (392)
+..... .+ .. .+..++|+|||+.|+.++. ++...+|.++..
T Consensus 331 ~~~~l~--~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~ 383 (396)
T 3c5m_A 331 SAQKLC--KH-STSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVP 383 (396)
T ss_dssp BCCEEE--EC-CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred ceEEcc--CC-CCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEc
Confidence 754332 22 22 2567899999998877664 567777777643
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=1.2e-18 Score=151.98 Aligned_cols=245 Identities=11% Similarity=-0.001 Sum_probs=181.6
Q ss_pred CCCeeEEEEcCCCCeEEEEeCC------------------------CeEEEEEEeCCccceeeccccCCCCCCCCCeEEE
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTN------------------------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCL 118 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 118 (392)
-+.+.+++++|+|+++++...+ +.|.+||..+++....... .+-.....+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~------~~~~~p~gi 96 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK------NLFYLPHGL 96 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT------TTCSSEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC------CccCCceEE
Confidence 4679999999999988887776 4699999877765332211 123468899
Q ss_pred EecCCCCEEEEEeCCCcEEEEeCCCCc-eeecc---------cCCCCcEEEEEecC-CCCeEEEEc-CCCcEEEEECCCC
Q 016257 119 SFSVDGSRFAAGGVDGHLRIMHWPSLR-IILDE---------PKAHKSVLDMDFSL-DSEFLATTS-TDGSARIWKTEDG 186 (392)
Q Consensus 119 ~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~---------~~~~~~i~~i~~~~-~~~~l~~~~-~d~~i~vwd~~~~ 186 (392)
+++++|+++++...++.|++|+..... .+..+ ..+......++++| +++++++.+ .++.|++|+ .++
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 999999988888888999999976442 23222 12223688999999 788777776 689999999 467
Q ss_pred eeeEEEecCCC---------cceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeec--ccCCCcEEEEECCC
Q 016257 187 VAWTFLTRNSD---------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR--LLRKPASVLSISLD 255 (392)
Q Consensus 187 ~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~ 255 (392)
+.+..+..... .....++++|++..+ .++...++.|++||..+++.+..+. .+...+..++++|
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l----~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p- 250 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL----CVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP- 250 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEE----EEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE----EEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-
Confidence 76666642211 237899999994442 5677788999999999888776663 3456788999999
Q ss_pred CCEEEE-------EeCCCcEEEEecCCceeeeeee--ccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecC
Q 016257 256 GKYLAM-------GSKDGDICVVDVKKMEINHWSK--RLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 256 ~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 320 (392)
+..+++ ...+..|++||..+++.+..+. ..+ ...+..++++|+|.++++...++.|++|++...
T Consensus 251 g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~-~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 251 GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH-FDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSC-CSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCc-cCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 333333 3345589999999998887653 234 567899999999988888888999999998754
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=9.8e-19 Score=154.82 Aligned_cols=275 Identities=9% Similarity=-0.013 Sum_probs=171.5
Q ss_pred eEEEEeCC--CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC-CCceeecccC-
Q 016257 77 DFVCSTTN--GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP-SLRIILDEPK- 152 (392)
Q Consensus 77 ~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~- 152 (392)
.+++|+.. +.|.+|++............. .......+..++|+|+|++|++++.+ .|.+|++. +++.......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~--~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRT--EIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEE--ECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEE--ccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee
Confidence 35555543 468888775432211111110 00122467889999999999998887 99999997 6665432111
Q ss_pred CCCcEEEEEecCCCCe--EEEEc-------------CCCcEEEEECC-CCeeeEEEec---CCCcceEEEEecCCCCcce
Q 016257 153 AHKSVLDMDFSLDSEF--LATTS-------------TDGSARIWKTE-DGVAWTFLTR---NSDEKIELCRFSKDGTKPF 213 (392)
Q Consensus 153 ~~~~i~~i~~~~~~~~--l~~~~-------------~d~~i~vwd~~-~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~ 213 (392)
..+....++|+|+|++ +++++ .++.+.+|++. +++....+.. .....+.+++|+|+|+.+
T Consensus 81 ~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l- 159 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL- 159 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE-
T ss_pred cCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE-
Confidence 1123556899999994 45553 68999999997 4554433331 233468999999999862
Q ss_pred EEEEEEeCCccEEEEEeCC-Cceee--eeec--ccCCCcEEEEECCCCCEEEEEeC-CCcEEEEecC--Cceeee---ee
Q 016257 214 LFCTVQRGDKALLAVYDIS-TWNKI--GHKR--LLRKPASVLSISLDGKYLAMGSK-DGDICVVDVK--KMEINH---WS 282 (392)
Q Consensus 214 ~~~~~~~~~d~~i~v~d~~-~~~~~--~~~~--~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~~ 282 (392)
+++...++.|.+||+. +++.. ..+. .+...+..++|+|+|+++++++. ++.|.+|+++ +++... .+
T Consensus 160 ---~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 236 (365)
T 1jof_A 160 ---YSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSF 236 (365)
T ss_dssp ---EEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred ---EEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceE
Confidence 2334456899999998 66543 2222 13567899999999999988775 6889999875 455321 11
Q ss_pred ec------cccCc------ceEEEE-EeeCCCeEEEEeCC-C-----eEEEEEeecCccccc-eeeee----eeeeeee-
Q 016257 283 KR------LHLGT------SIALVE-FCPTQRVVLTASKE-W-----GAMITKLTVPADWKE-WQIYS----LLLALFL- 337 (392)
Q Consensus 283 ~~------~~~~~------~i~~~~-~s~~~~~l~~~~~d-g-----~i~iw~~~~~~~~~~-~~~~~----~~~~~~~- 337 (392)
.. +| .. .+..++ |+|||++|++++.+ + .|.+|++........ ..... .+....+
T Consensus 237 ~~~~~~~~g~-~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~s 315 (365)
T 1jof_A 237 PLIPPGIPDR-DPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVS 315 (365)
T ss_dssp ESSCTTCCCB-CTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEE
T ss_pred EcCCCCcCCc-ccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceec
Confidence 11 11 11 588999 99999988777643 2 899999963222111 00000 0111111
Q ss_pred ----eceEEEEeee-cceeeeeccccc
Q 016257 338 ----ASAVVFYIFF-ENSDSFWNFPVA 359 (392)
Q Consensus 338 ----~~~~~~~~~~-d~~i~~W~~~~~ 359 (392)
....++++.. ++.|++|++...
T Consensus 316 p~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 316 PCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2445666655 489999998754
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=1.3e-18 Score=166.53 Aligned_cols=288 Identities=15% Similarity=0.058 Sum_probs=183.3
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCee---------EEEEc--
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPM---------TIAVN-- 72 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~s-- 72 (392)
+..+..++|+++. .+.+.+.. ..++...||.....+. ...+..|...+. ...|+
T Consensus 23 ~~~~~~~~~s~~~---~~~~~~~~----~~~~~~~l~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~S 87 (662)
T 3azo_A 23 SGRPACVGAVGDE---VWWVAPRP----AEAGRATLVRRRADGA--------EESALPAPWNVRNRVFEYSGFPWAGVPR 87 (662)
T ss_dssp CSCCEEEEEETTE---EEEEEEET----TTTTEEEEEEECTTSC--------EEESSCTTCCBCCCGGGTCCCCEEEECC
T ss_pred CCccceeEEcCCe---EEEEecCc----ccCCcEEEEEECCCCC--------cceeCCCCccccccccccCCccceeeee
Confidence 3567888888763 23332210 1244577888742211 233455555555 56565
Q ss_pred CCCCe-EEEEeC-CCeEEEEEEe--CCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC----------CcEEE
Q 016257 73 PSGDD-FVCSTT-NGGCKLFEVY--GGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----------GHLRI 138 (392)
Q Consensus 73 p~~~~-l~~~~~-d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------g~i~i 138 (392)
|||+. |+.++. +..|.++++. .......+.. .....+...+..++|+|||+.|++++.+ ..|++
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~--~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTP--VSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSC--CCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccC--CccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 99998 776654 3445555543 1022222211 0000134578899999999999998876 58999
Q ss_pred EeCCC------Cceeeccc-CCCCcEEEEEecCCCCeEEEEcCC--------CcEEEEECC-CC--eeeEEEecCCCcce
Q 016257 139 MHWPS------LRIILDEP-KAHKSVLDMDFSLDSEFLATTSTD--------GSARIWKTE-DG--VAWTFLTRNSDEKI 200 (392)
Q Consensus 139 ~d~~~------~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d--------~~i~vwd~~-~~--~~~~~~~~~~~~~v 200 (392)
||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ .....+...+...+
T Consensus 166 ~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~ 244 (662)
T 3azo_A 166 VPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI 244 (662)
T ss_dssp EETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE
T ss_pred EECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE
Confidence 99987 444 3444 555678889999999999987754 379999998 56 23344444444578
Q ss_pred EEEEecCCCCcceEEEEEEeCCcc--EEEEEeCCCceeeeeecccCCC--------cEEEEECCCCCEEEEEeCCCcEEE
Q 016257 201 ELCRFSKDGTKPFLFCTVQRGDKA--LLAVYDISTWNKIGHKRLLRKP--------ASVLSISLDGKYLAMGSKDGDICV 270 (392)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~~~~~dg~i~i 270 (392)
..++|+|||+. ++++..++ .|.+||+.+++.......+... +..++|+|+++++++++. +.++|
T Consensus 245 ~~~~~spdg~l-----~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l 318 (662)
T 3azo_A 245 AQAEWAPDGSL-----IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVL 318 (662)
T ss_dssp EEEEECTTSCE-----EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEE
T ss_pred cceEECCCCeE-----EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEE
Confidence 99999999983 45666667 7888887666654333322211 467899999999999998 99999
Q ss_pred E--ecCCceeeeeeeccccCcceEEE-EEeeCCCeEEEEeCCCeEEEEEee
Q 016257 271 V--DVKKMEINHWSKRLHLGTSIALV-EFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 271 w--d~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
| |+.+++. ..+ ..+ ...+..+ +++.+.-++++++.+....+|.++
T Consensus 319 ~~~d~~~~~~-~~l-~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 319 GILDPESGEL-VDA-AGP-WTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp EEEETTTTEE-EEC-CSS-CCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCcE-EEe-cCC-CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 9 6666664 333 345 5667766 444333345566677666777665
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=3.6e-19 Score=170.26 Aligned_cols=249 Identities=10% Similarity=0.018 Sum_probs=171.8
Q ss_pred CceEEEeeCCCCCeeEEEEcCCCCeEEEE--eCCCeEEEEEEeCCccceeeccccCCCCCCCCCeE---------EEEec
Q 016257 53 PLVTYVFDESEGDPMTIAVNPSGDDFVCS--TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK---------CLSFS 121 (392)
Q Consensus 53 ~~~~~~~~~h~~~v~~~~~sp~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~s 121 (392)
+.....+.+|...+..++|++++-+++.. +.++...||....+.....+.. +...+. ...|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~ 85 (662)
T 3azo_A 13 PIDAALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALP-------APWNVRNRVFEYSGFPWAGV 85 (662)
T ss_dssp SCCHHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSC-------TTCCBCCCGGGTCCCCEEEE
T ss_pred CCCHHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCC-------CCccccccccccCCccceee
Confidence 33334567789999999999876566666 4578899999754433222221 222333 45554
Q ss_pred --CCCCE-EEEEeC-CCcEEEEeCC--C-CceeecccC-----CCCcEEEEEecCCCCeEEEEcCC----------CcEE
Q 016257 122 --VDGSR-FAAGGV-DGHLRIMHWP--S-LRIILDEPK-----AHKSVLDMDFSLDSEFLATTSTD----------GSAR 179 (392)
Q Consensus 122 --~~~~~-l~~~~~-dg~i~i~d~~--~-~~~~~~~~~-----~~~~i~~i~~~~~~~~l~~~~~d----------~~i~ 179 (392)
|||++ |+.++. +..|+++++. . ++ ...+.. +...+.+++|+|||+.|++++.+ ..|+
T Consensus 86 ~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 86 PRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp CCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred eecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 99998 776654 5667777765 2 33 333433 34578899999999999988876 5899
Q ss_pred EEECCC------CeeeEEEe-cCCCcceEEEEecCCCCcceEEEEEEeCC--------ccEEEEEeCC-Cc---eeeeee
Q 016257 180 IWKTED------GVAWTFLT-RNSDEKIELCRFSKDGTKPFLFCTVQRGD--------KALLAVYDIS-TW---NKIGHK 240 (392)
Q Consensus 180 vwd~~~------~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--------d~~i~v~d~~-~~---~~~~~~ 240 (392)
+||+.+ ++. ..+. .+ ...+..++|+|||+. ++..+. ...|.+||+. ++ +.....
T Consensus 165 ~~~~~~~~~~~~~~~-~~l~~~~-~~~~~~~~~SpDG~~-----la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 165 AVPLDGSAAADRSAV-RELSDDA-HRFVTGPRLSPDGRQ-----AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEETTSTTTTCGGGS-EESSCSC-SSEECCCEECTTSSE-----EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEECCCCccccCCce-eEEEecC-CCcccCceECCCCCE-----EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 999987 443 4444 33 346788999999997 333332 2589999998 56 443333
Q ss_pred cccCCCcEEEEECCCCCEEEEEeCCC--cEEEEecCCceeeeeeeccccCcc--------eEEEEEeeCCCeEEEEeCCC
Q 016257 241 RLLRKPASVLSISLDGKYLAMGSKDG--DICVVDVKKMEINHWSKRLHLGTS--------IALVEFCPTQRVVLTASKEW 310 (392)
Q Consensus 241 ~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~--------i~~~~~s~~~~~l~~~~~dg 310 (392)
..+...+..++|+|||++++++..++ .|.+||+.+++...... .+ ... +..++|+|+++++++++. +
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~-~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~ 314 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-RE-EEFAGPLWTPGMRWFAPLANGLIAVVHGK-G 314 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CS-SBSSCCCCSTTCCSEEECTTSCEEEEEBS-S
T ss_pred CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-cc-ccccCccccccCceEeEeCCCEEEEEEEc-C
Confidence 44467889999999999888888888 56677776776554432 22 221 567899999999999998 9
Q ss_pred eEEEEEeec
Q 016257 311 GAMITKLTV 319 (392)
Q Consensus 311 ~i~iw~~~~ 319 (392)
.++||.++.
T Consensus 315 ~~~l~~~d~ 323 (662)
T 3azo_A 315 AAVLGILDP 323 (662)
T ss_dssp SCEEEEEET
T ss_pred ccEEEEEEC
Confidence 999997764
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=2.9e-17 Score=144.78 Aligned_cols=247 Identities=11% Similarity=0.080 Sum_probs=158.1
Q ss_pred cCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEe----------CCCeEEEEEEeCCccceeecc
Q 016257 34 PSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLA 103 (392)
Q Consensus 34 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~ 103 (392)
++.+.+|+. .+ ......+..+..+ .++|+|||+++++++ .++.|.+||..+.+....+..
T Consensus 30 d~~v~v~D~--~t------~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~ 99 (361)
T 2oiz_A 30 ESRVHVYDY--TN------GKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISL 99 (361)
T ss_dssp GCEEEEEET--TT------CCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEE
T ss_pred cCeEEEEEC--CC------CeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEc
Confidence 556666653 32 2223445555444 899999999999886 356799999887765544432
Q ss_pred ccCCCCCCCCCeEEEEecCCCCEEEEEeC--CCcEEEEeCCCCceeec-ccCCCCcEEEEEecCCC-CeEEEEcCCCc--
Q 016257 104 KKMPPLQDAGPQKCLSFSVDGSRFAAGGV--DGHLRIMHWPSLRIILD-EPKAHKSVLDMDFSLDS-EFLATTSTDGS-- 177 (392)
Q Consensus 104 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~~~~~-~~l~~~~~d~~-- 177 (392)
.. ....+......++++|||++|+++.. ++.|.+||+++++.+.. +... ....+.+.|++ ..+++.+.||.
T Consensus 100 ~~-~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~ 176 (361)
T 2oiz_A 100 PP-KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLL 176 (361)
T ss_dssp CT-TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEE
T ss_pred Cc-cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEE
Confidence 11 01112345678999999999998874 57899999999877655 3221 11112333332 23333334444
Q ss_pred ----------------------------------------------EEEEECCCCee--eEEEecCC---------Ccce
Q 016257 178 ----------------------------------------------ARIWKTEDGVA--WTFLTRNS---------DEKI 200 (392)
Q Consensus 178 ----------------------------------------------i~vwd~~~~~~--~~~~~~~~---------~~~v 200 (392)
+.++|+..... ...+.... ....
T Consensus 177 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 256 (361)
T 2oiz_A 177 TINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGY 256 (361)
T ss_dssp EEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCS
T ss_pred EEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCe
Confidence 44444432211 11111000 0001
Q ss_pred EEEEecCCCCcceEEEEEEe--C-------CccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEE
Q 016257 201 ELCRFSKDGTKPFLFCTVQR--G-------DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVV 271 (392)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~--~-------~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 271 (392)
..++|+|++..+|. ... + ..+.|.+||+.+++.+..+..+. ...++|+|||++|++++. +.|.+|
T Consensus 257 ~~~a~~~dg~~lyv---~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~ 330 (361)
T 2oiz_A 257 NLVGLHRASGRMYV---FMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVY 330 (361)
T ss_dssp SCEEEETTTTEEEE---EEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEE
T ss_pred eEEEEecCCCeEEE---EEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEE
Confidence 12688999887432 211 1 14589999999999998887766 899999999999998887 999999
Q ss_pred ecCCc--eeeeeeeccccCcceEEEEEeeCCC
Q 016257 272 DVKKM--EINHWSKRLHLGTSIALVEFCPTQR 301 (392)
Q Consensus 272 d~~~~--~~~~~~~~~~~~~~i~~~~~s~~~~ 301 (392)
|..++ +.+..+ ..+ ......++++|+|+
T Consensus 331 D~~t~~l~~~~~i-~~~-G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 331 DISQPEPKLLRTI-EGA-AEASLQVQFHPVGG 360 (361)
T ss_dssp ECSSSSCEEEEEE-TTS-CSSEEEEEECCCSC
T ss_pred ECCCCcceeeEEe-ccC-CCCcEEEEecCCCC
Confidence 99999 887765 234 66788999999986
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.81 E-value=9e-18 Score=147.52 Aligned_cols=256 Identities=10% Similarity=0.010 Sum_probs=164.3
Q ss_pred CCeeEEEEcCCCCeEEEEe---------CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC-
Q 016257 64 GDPMTIAVNPSGDDFVCST---------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD- 133 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d- 133 (392)
..+..+++ ||+.++... .++.|.+|++.+++.. .+ ..+..++|||||++|+..+.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l-----------~~~~~~~~SpDg~~la~~~~~~ 80 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI-----------ENATMPRISPDGKKIAFMRANE 80 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE-----------ESCEEEEECTTSSEEEEEEEET
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec-----------ccCCCeEECCCCCEEEEEEecc
Confidence 45667777 888887642 2567888888776521 11 357889999999999887654
Q ss_pred --C--cEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCC---------------------------CcEEEEE
Q 016257 134 --G--HLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD---------------------------GSARIWK 182 (392)
Q Consensus 134 --g--~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---------------------------~~i~vwd 182 (392)
+ .|++|++.+++..... .... +..+.|+||++.|+.++.+ ..|++||
T Consensus 81 ~~~~~~l~~~~~~~g~~~~l~-~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 81 EKKVSEIWVADLETLSSKKIL-EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEE-EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred CCCcceEEEEECCCCceEEEE-cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 2 3888888877654333 2333 8999999999998887632 5699999
Q ss_pred CCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCC---------ccEEEEEeCCCceeeeeecccCCCcEEEEEC
Q 016257 183 TEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD---------KALLAVYDISTWNKIGHKRLLRKPASVLSIS 253 (392)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s 253 (392)
+.+++.+..+.. . .+..++|+|++ . ++++.. ...|.++| +++.. .+..+ ..+..+ +
T Consensus 159 ~~~~~~~~~l~~--~-~~~~~~~spdg-~-----~~~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~~~-~~~~~~--s 223 (347)
T 2gop_A 159 TESEEVIEEFEK--P-RFSSGIWHRDK-I-----VVNVPHREIIPQYFKFWDIYIWE--DGKEE-KMFEK-VSFYAV--D 223 (347)
T ss_dssp TTTTEEEEEEEE--E-TTCEEEEETTE-E-----EEEEECCCSSCCSSCCEEEEEEE--TTEEE-EEEEE-ESEEEE--E
T ss_pred CCCCeEEeeecC--C-CcccccCCCCe-E-----EEEEecccccccccccccEEEeC--CCceE-EeccC-cceeeE--C
Confidence 988877455544 2 57899999999 3 233322 23566666 44433 33333 444444 9
Q ss_pred CCCCEEEEEeCC--------CcEEEEecCCceeeeeeeccccCcceEE-EEEeeCCCeEEEEeCCCeEEEEEeecCcccc
Q 016257 254 LDGKYLAMGSKD--------GDICVVDVKKMEINHWSKRLHLGTSIAL-VEFCPTQRVVLTASKEWGAMITKLTVPADWK 324 (392)
Q Consensus 254 ~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 324 (392)
|+|++|+.++.+ ..|.+|| +++..... ..+ ...+.. +.|+ ++ ++++++.++.+++| +..+....
T Consensus 224 pdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~-~~~-~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~ 296 (347)
T 2gop_A 224 SDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL-DEV-DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP 296 (347)
T ss_dssp ECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS-TTC-CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE
T ss_pred CCCCEEEEEEccccCCccccceEEEEC--CCceEecc-ccC-CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE
Confidence 999998887754 3688888 55544333 345 567886 9999 88 88999999999999 88322111
Q ss_pred ceeeeeeeeeeeeeceEEEEeeeccee-eeeccc
Q 016257 325 EWQIYSLLLALFLASAVVFYIFFENSD-SFWNFP 357 (392)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~d~~i-~~W~~~ 357 (392)
.......+.........+++...++.. ++|.+.
T Consensus 297 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 297 IAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EECSSSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred EecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 111001111111112445555555554 777765
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.81 E-value=1.2e-17 Score=146.81 Aligned_cols=224 Identities=13% Similarity=0.081 Sum_probs=152.1
Q ss_pred CCeeEEEEcCCCCeEEEEeCC---Ce--EEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC-----
Q 016257 64 GDPMTIAVNPSGDDFVCSTTN---GG--CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----- 133 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d---~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----- 133 (392)
..+..++|+|||++|+..+.+ +. |.+|++.+++.. .+.. +.. +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~-~l~~-------~~~-~~~~~wspdg~~l~~~~~~~~~~~ 129 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK-KILE-------AKN-IRSLEWNEDSRKLLIVGFKRREDE 129 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE-EEEE-------ESE-EEEEEECTTSSEEEEEEECCCC--
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE-EEEc-------CCC-ccceeECCCCCEEEEEEccCCCcC
Confidence 468899999999999987654 34 666666655422 1111 123 8899999999999887642
Q ss_pred ----------------------CcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCC-------cEEEEECC
Q 016257 134 ----------------------GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG-------SARIWKTE 184 (392)
Q Consensus 134 ----------------------g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~-------~i~vwd~~ 184 (392)
..|++||+.+++.+..+.. . .+..+.|+|+| +++++..+. ...+|.+.
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 130 DFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp -------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred CcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 5689999988876333333 3 78889999999 777775542 34555444
Q ss_pred CCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCC-------ccEEEEEeCCCceeeeeecccCCCcEE-EEECCCC
Q 016257 185 DGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD-------KALLAVYDISTWNKIGHKRLLRKPASV-LSISLDG 256 (392)
Q Consensus 185 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------d~~i~v~d~~~~~~~~~~~~~~~~v~~-~~~s~~~ 256 (392)
+++. ..+..+ ..+..+ +|+|+.++ +.+.. ...|.+|| +++.......+...+.. +.|+ ++
T Consensus 207 ~~~~-~~l~~~--~~~~~~--spdg~~l~----~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg 274 (347)
T 2gop_A 207 DGKE-EKMFEK--VSFYAV--DSDGERIL----LYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK 274 (347)
T ss_dssp TTEE-EEEEEE--ESEEEE--EECSSCEE----EEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE
T ss_pred CCce-EEeccC--cceeeE--CCCCCEEE----EEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc
Confidence 4443 334333 344444 99999732 22222 35788998 55554444455667776 8999 88
Q ss_pred CEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeE-EEEEee
Q 016257 257 KYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGA-MITKLT 318 (392)
Q Consensus 257 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i-~iw~~~ 318 (392)
++++++.++.++|| +.+++..... .+ ...|.+++|+| .++++++.++.. .+|.+.
T Consensus 275 -~~~~~~~~~~~~l~-~~~g~~~~~~--~~-~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 275 -VYFTLFEEGSVNLY-IWDGEIKPIA--KG-RHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -EEEEEEETTEEEEE-EESSSEEEEE--CS-SSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred -EEEEEecCCcEEEE-EcCCceEEEe--cC-CCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 88999999999999 8866554332 34 67899999999 677777777665 788775
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=1.8e-17 Score=159.50 Aligned_cols=244 Identities=12% Similarity=0.039 Sum_probs=169.9
Q ss_pred CCCCeeEEEEcCCCCeEEEEeCCC-----eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCc-
Q 016257 62 SEGDPMTIAVNPSGDDFVCSTTNG-----GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH- 135 (392)
Q Consensus 62 h~~~v~~~~~sp~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~- 135 (392)
|...+..++|||||++||.+..++ .|++||+.+++........ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--------~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--------VKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--------ECSCCEEECTTSSEEEEEECCCCS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--------cccceEEEEeCCCEEEEEEECCcc
Confidence 445688999999999998776543 8999999888754322211 12567999999999999887765
Q ss_pred ---------------EEEEeCCCCce----eecccCCCCcEEEEEecCCCCeEEEEcC-----CCcEEEEECCC------
Q 016257 136 ---------------LRIMHWPSLRI----ILDEPKAHKSVLDMDFSLDSEFLATTST-----DGSARIWKTED------ 185 (392)
Q Consensus 136 ---------------i~i~d~~~~~~----~~~~~~~~~~i~~i~~~~~~~~l~~~~~-----d~~i~vwd~~~------ 185 (392)
|++|++.+++. +.....+...+..+.|+|||++|+.++. +..|++||+.+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 274 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT 274 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccC
Confidence 99999987762 2222223345789999999999887764 56899999976
Q ss_pred Ce-eeEEEecCCCcceEEEEecCCCCcceEEEEEEeC---CccEEEEEeCCCcee--eeeecccC--CCcEEEEECCCCC
Q 016257 186 GV-AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG---DKALLAVYDISTWNK--IGHKRLLR--KPASVLSISLDGK 257 (392)
Q Consensus 186 ~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~d~~i~v~d~~~~~~--~~~~~~~~--~~v~~~~~s~~~~ 257 (392)
+. ....+..+.. .+.. .|+|++..++ +.+. ....|.+||+.++.. ...+..+. ..+..++|++++.
T Consensus 275 ~~~~~~~l~~~~~-~~~~-~~s~dg~~l~----~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 275 GILKWVKLIDNFE-GEYD-YVTNEGTVFT----FKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp SSCCCEEEECSSS-SCEE-EEEEETTEEE----EEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE
T ss_pred CccceEEeeCCCC-cEEE-EEeccCCEEE----EEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE
Confidence 43 3455554443 3333 5889988732 2222 245899999987642 23333333 2577899998888
Q ss_pred EEEEEeCCCc--EEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEE-e---CCCeEEEEEeecCc
Q 016257 258 YLAMGSKDGD--ICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTA-S---KEWGAMITKLTVPA 321 (392)
Q Consensus 258 ~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~---~dg~i~iw~~~~~~ 321 (392)
++++...|+. |.+||+.+++....+ ..+ .+.+..++++|+++.++.. + ..+.+..|++..+.
T Consensus 349 lv~~~~~~g~~~l~~~~~~~g~~~~~l-~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQLHDLATGALLKIF-PLE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEE-CCC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEECCEEEEEEEECCCCCEEEec-CCC-CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8888888885 566777677655554 345 6788999999998765533 2 24789999987654
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=2.2e-18 Score=154.18 Aligned_cols=239 Identities=9% Similarity=-0.061 Sum_probs=158.5
Q ss_pred eeEEEEcCCCCeEEEEeCC---CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 016257 66 PMTIAVNPSGDDFVCSTTN---GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (392)
Q Consensus 66 v~~~~~sp~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 142 (392)
+..++|+|||++|+..... ..|.+|++.+++.. .+.. .+......+.|+|||++|+.++.++.|++||+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTE------GKGDNTFGGFISTDERAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE-ECCC------SSCBCTTTCEECTTSSEEEEEETTTEEEEEETT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE-Eeec------CCCCccccceECCCCCEEEEEEcCCcEEEEECC
Confidence 7788999999998877543 36777887666432 1111 011122337899999999999999999999998
Q ss_pred CCceeecccCCCCcEEE-------------------EEecCCCCeEEEE-----cCCCcEEEEECCCCeeeEEEecCCCc
Q 016257 143 SLRIILDEPKAHKSVLD-------------------MDFSLDSEFLATT-----STDGSARIWKTEDGVAWTFLTRNSDE 198 (392)
Q Consensus 143 ~~~~~~~~~~~~~~i~~-------------------i~~~~~~~~l~~~-----~~d~~i~vwd~~~~~~~~~~~~~~~~ 198 (392)
+++.......+...... +.|+|+++.++.. ..+..|++||+.+++...... ...
T Consensus 111 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~--~~~ 188 (396)
T 3c5m_A 111 TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ--DTA 188 (396)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE--ESS
T ss_pred CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc--CCc
Confidence 87754433322222222 3567888877654 356689999998877655443 233
Q ss_pred ceEEEEecC-CCCcceEEEEEEeCCc----cEEEEEeCCCceeeeeeccc-CCCcEEEEECCCCCEEEEEeCC-----Cc
Q 016257 199 KIELCRFSK-DGTKPFLFCTVQRGDK----ALLAVYDISTWNKIGHKRLL-RKPASVLSISLDGKYLAMGSKD-----GD 267 (392)
Q Consensus 199 ~v~~~~~~~-~~~~~~~~~~~~~~~d----~~i~v~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~ 267 (392)
.+..+.|+| ++..++ ....... ..|.+||+..++........ ...+..++|+|+|++|+.++.+ +.
T Consensus 189 ~~~~~~~sp~dg~~l~---~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 265 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVG---FCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV 265 (396)
T ss_dssp CEEEEEEETTEEEEEE---EEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE
T ss_pred ccccceECCCCCCEEE---EEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccce
Confidence 688999999 776522 1222222 57999998765533222211 2357788999999988777544 34
Q ss_pred EEEEecCCceeeeeeeccccCcceEEEEEee-CCCeEEEEe----------------CCCeEEEEEeecCc
Q 016257 268 ICVVDVKKMEINHWSKRLHLGTSIALVEFCP-TQRVVLTAS----------------KEWGAMITKLTVPA 321 (392)
Q Consensus 268 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~i~iw~~~~~~ 321 (392)
|++||+.+++...... .. ... +.|+| ||+++++++ .++.|++|++....
T Consensus 266 l~~~d~~~g~~~~l~~-~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 266 IYKANPETLENEEVMV-MP---PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp EEEECTTTCCEEEEEE-CC---SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred EEEEECCCCCeEEeee-CC---CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 9999999887654331 11 233 89999 999888765 34688899886544
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=1.5e-16 Score=138.97 Aligned_cols=271 Identities=11% Similarity=0.024 Sum_probs=179.9
Q ss_pred CCceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEe
Q 016257 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCST 82 (392)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 82 (392)
.+.+|.+++|+++...+..+ ..+..++.|. . .....+..+...+.+++|+|+|++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 63 (333)
T 2dg1_A 4 SQQDLPTLFYSGKSNSAVPI---------ISESELQTIT-A----------EPWLEISKKGLQLEGLNFDRQGQLFLLDV 63 (333)
T ss_dssp --CCCCBCCSCGGGGCSSCC---------CCGGGSCEEE-C----------EEEEEEESSCCCEEEEEECTTSCEEEEET
T ss_pred cccccceeeecCCccceeEE---------eecccCcccc-c----------ceeEEEeccCccccCcEECCCCCEEEEEC
Confidence 35678999999987442211 1244566661 1 12234556677789999999999777888
Q ss_pred CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC----CcEEEEeCCCCceeeccc--CCCCc
Q 016257 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----GHLRIMHWPSLRIILDEP--KAHKS 156 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~~~ 156 (392)
.++.|.+||..+++...... .+...+.+++++++|+++++...+ +.|.+||.++++...... .....
T Consensus 64 ~~~~i~~~d~~~~~~~~~~~-------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 136 (333)
T 2dg1_A 64 FEGNIFKINPETKEIKRPFV-------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYC 136 (333)
T ss_dssp TTCEEEEECTTTCCEEEEEE-------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCC
T ss_pred CCCEEEEEeCCCCcEEEEee-------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCc
Confidence 88999999987665332211 134578999999999887777666 689999988776542221 23347
Q ss_pred EEEEEecCCCCeEEEEcC------CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEe
Q 016257 157 VLDMDFSLDSEFLATTST------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (392)
Q Consensus 157 i~~i~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d 230 (392)
+.+++++|+++++++... .+.|..+|..+++... +.... ..+..++|+|+++.+ .++...++.|.+||
T Consensus 137 ~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~-~~~~~i~~~~dg~~l----~v~~~~~~~i~~~d 210 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNI-SVANGIALSTDEKVL----WVTETTANRLHRIA 210 (333)
T ss_dssp EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEE-SSEEEEEECTTSSEE----EEEEGGGTEEEEEE
T ss_pred ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCC-CcccceEECCCCCEE----EEEeCCCCeEEEEE
Confidence 899999999987776653 2456666665444433 22221 247889999999852 24455678999999
Q ss_pred CCC-ceeeee-----eccc--CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCc------ceEEEEE
Q 016257 231 IST-WNKIGH-----KRLL--RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGT------SIALVEF 296 (392)
Q Consensus 231 ~~~-~~~~~~-----~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~i~~~~~ 296 (392)
+++ +..... .... ...+..++++++|+++++...++.|.+||.. ++....+. .+ .. .+.+++|
T Consensus 211 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~-~~-~~~~g~~~~~~~~~~ 287 (333)
T 2dg1_A 211 LEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQIL-IP-GRDEGHMLRSTHPQF 287 (333)
T ss_dssp ECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEE-CT-TGGGTCSCBCCEEEE
T ss_pred ecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEE-cC-CCccccccCcceEEE
Confidence 863 222211 1011 1356789999999988887778899999984 55444442 22 22 6899999
Q ss_pred eeCCCeEEEEeCC
Q 016257 297 CPTQRVVLTASKE 309 (392)
Q Consensus 297 s~~~~~l~~~~~d 309 (392)
+||++.|+.++.+
T Consensus 288 ~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 288 IPGTNQLIICSND 300 (333)
T ss_dssp CTTSCEEEEEEEC
T ss_pred CCCCCEEEEEeCc
Confidence 9998777655554
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=9.5e-17 Score=137.75 Aligned_cols=235 Identities=11% Similarity=-0.024 Sum_probs=164.8
Q ss_pred EeeCCCCCeeEEEEcCCCC-eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcE
Q 016257 58 VFDESEGDPMTIAVNPSGD-DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHL 136 (392)
Q Consensus 58 ~~~~h~~~v~~~~~sp~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 136 (392)
.+..+.....+++|+|+++ .++++..++.|..|+..++ ...+.. +...+.+++++++|+++++...++.|
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~-------~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH-------PSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES-------SCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC-------CCCCcceeeECCCCcEEEEecCCCeE
Confidence 3445567789999999998 6778888899999998765 222211 34578999999999988777667899
Q ss_pred EEEeCCCCceeecccCC----CCcEEEEEecCCCCeEEEE----c-------------CCCcEEEEECCCCeeeEEEecC
Q 016257 137 RIMHWPSLRIILDEPKA----HKSVLDMDFSLDSEFLATT----S-------------TDGSARIWKTEDGVAWTFLTRN 195 (392)
Q Consensus 137 ~i~d~~~~~~~~~~~~~----~~~i~~i~~~~~~~~l~~~----~-------------~d~~i~vwd~~~~~~~~~~~~~ 195 (392)
.+||.++++........ ...+.+++++|+|+++++. + ..+.|..++.. ++. ..+..+
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~ 170 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRD 170 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECC
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecC
Confidence 99999887754322111 1246789999999988873 2 12355555554 433 333333
Q ss_pred CCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCC-Ccee---eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEE
Q 016257 196 SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS-TWNK---IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVV 271 (392)
Q Consensus 196 ~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~-~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 271 (392)
......++|+|+++. +++...++.|.+||+. .++. ...+......+..++++++|++.++. ++.|.+|
T Consensus 171 -~~~~~gi~~s~dg~~-----lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~ 242 (296)
T 3e5z_A 171 -RVKPNGLAFLPSGNL-----LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVL 242 (296)
T ss_dssp -CSSEEEEEECTTSCE-----EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEE
T ss_pred -CCCCccEEECCCCCE-----EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEE
Confidence 335789999999996 5667778999999986 4433 22222334556789999999876665 7889999
Q ss_pred ecCCceeeeeeeccccCcceEEEEE-eeCCCeEEEEeCCCeEEEEEee
Q 016257 272 DVKKMEINHWSKRLHLGTSIALVEF-CPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 272 d~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
|.+ ++....+. .+ .. +++++| +|+++.|++++.+ .+|.++
T Consensus 243 ~~~-g~~~~~~~-~~-~~-~~~~~f~~~d~~~L~v~t~~---~l~~~~ 283 (296)
T 3e5z_A 243 TPD-GDELGRVL-TP-QT-TSNLCFGGPEGRTLYMTVST---EFWSIE 283 (296)
T ss_dssp CTT-SCEEEEEE-CS-SC-CCEEEEESTTSCEEEEEETT---EEEEEE
T ss_pred CCC-CCEEEEEE-CC-CC-ceeEEEECCCCCEEEEEcCC---eEEEEE
Confidence 987 56555553 34 44 899999 5888888888877 455554
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.79 E-value=1.5e-17 Score=159.67 Aligned_cols=244 Identities=11% Similarity=-0.009 Sum_probs=163.6
Q ss_pred CCCCCeeEEEEcCCCCeEEEE-----eCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCc
Q 016257 61 ESEGDPMTIAVNPSGDDFVCS-----TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (392)
Q Consensus 61 ~h~~~v~~~~~sp~~~~l~~~-----~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (392)
+|...+..++|||||++||.+ +.+..|++||+.+++..... . +.. .....++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~---~---~~~-~~~~~~~wspDg~~l~~~~~d~~ 190 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD---V---IEG-GKYATPKWTPDSKGFYYEWLPTD 190 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC---C---BSC-CTTCCCEECTTSSEEEEEECCCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc---c---cCc-ccccceEEecCCCEEEEEEecCC
Confidence 455679999999999999843 34568999999888643000 0 111 11267999999999999988776
Q ss_pred -------------EEEEeCCCCc----eeecccCCCCcEEEEEecCCCCeEEEEcCCC----cEEEEECCCCeeeEEEec
Q 016257 136 -------------LRIMHWPSLR----IILDEPKAHKSVLDMDFSLDSEFLATTSTDG----SARIWKTEDGVAWTFLTR 194 (392)
Q Consensus 136 -------------i~i~d~~~~~----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~----~i~vwd~~~~~~~~~~~~ 194 (392)
|++|++.+++ .+.....+...+..+.|+|||++|+.++.++ .|++++..+++ ...+..
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~ 269 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVK 269 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEE
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeec
Confidence 9999998776 2333333445788999999999998877665 67777665554 344444
Q ss_pred CCCcceEEEEecCCCCcceEEEEEEeC---CccEEEEEeCCCcee--eeeeccc--CCCcEEEEECCCCCEEEEEeCCCc
Q 016257 195 NSDEKIELCRFSKDGTKPFLFCTVQRG---DKALLAVYDISTWNK--IGHKRLL--RKPASVLSISLDGKYLAMGSKDGD 267 (392)
Q Consensus 195 ~~~~~v~~~~~~~~~~~~~~~~~~~~~---~d~~i~v~d~~~~~~--~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~ 267 (392)
+.. .+....+ +++. ++ +.+. .++.|.+||+.+++. ...+..+ ...+..++++ ++.++++...|+.
T Consensus 270 ~~~-~~~~~~~-~~g~-l~----~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 270 GVG-AKYEVHA-WKDR-FY----VLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT 341 (695)
T ss_dssp CSS-CCEEEEE-ETTE-EE----EEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE
T ss_pred CCC-ceEEEEe-cCCc-EE----EEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 433 3455556 5665 32 3333 468999999987653 1222222 4457788888 6778888889998
Q ss_pred EEEEecC-CceeeeeeeccccCcceEEEEEeeCCCeEEEEe----CCCeEEEEEeecCc
Q 016257 268 ICVVDVK-KMEINHWSKRLHLGTSIALVEFCPTQRVVLTAS----KEWGAMITKLTVPA 321 (392)
Q Consensus 268 i~iwd~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~iw~~~~~~ 321 (392)
.+||.+. +++....+.... .+.+..++++|+++.++... ..+.|++|++..+.
T Consensus 342 ~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTVQLPG-VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEEEETTCCEEEECCCSS-SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEEeCCCCeeEEecCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 8888655 344444332222 56678889999998666332 24789999987543
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.79 E-value=1.5e-15 Score=140.56 Aligned_cols=280 Identities=10% Similarity=0.036 Sum_probs=186.8
Q ss_pred ecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEE
Q 016257 10 GSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKL 89 (392)
Q Consensus 10 ~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~i 89 (392)
..|..|..++.+++. . .++.+.+++.+ + ......+.. ...+..+.|+|||+++++++.++.|.+
T Consensus 159 ~~~~~d~~~~~~V~~-~------~~~~V~viD~~--t------~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~v 222 (567)
T 1qks_A 159 QMNDWDLENLFSVTL-R------DAGQIALIDGS--T------YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNM 222 (567)
T ss_dssp CCSCCCGGGEEEEEE-T------TTTEEEEEETT--T------CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred cccccCCCceEEEEe-C------CCCeEEEEECC--C------CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEE
Confidence 345666555344442 2 24445555543 2 222333432 345779999999999999999999999
Q ss_pred EEEe--CCccceeeccccCCCCCCCCCeEEEEec----CCCCEEEEEeC-CCcEEEEeCCCCceeecccCC---------
Q 016257 90 FEVY--GGATDINLLAKKMPPLQDAGPQKCLSFS----VDGSRFAAGGV-DGHLRIMHWPSLRIILDEPKA--------- 153 (392)
Q Consensus 90 w~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~--------- 153 (392)
||+. +.+...++.. ......++|+ |||+++++++. ++.+.++|..+.+.+..+...
T Consensus 223 iD~~~~t~~~v~~i~~--------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~ 294 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKI--------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 294 (567)
T ss_dssp EETTSSSCCEEEEEEC--------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCE
T ss_pred EECCCCCCcEeEEEec--------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccc
Confidence 9985 5544433321 2346789999 69999888765 589999999998876554321
Q ss_pred --CCcEEEEEecCCCCe-EEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEe
Q 016257 154 --HKSVLDMDFSLDSEF-LATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (392)
Q Consensus 154 --~~~i~~i~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d 230 (392)
...+..+..++++.. ++....+|.|.++|....+.+.............+.|+|+++++ +++...++.|.++|
T Consensus 295 ~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~----~va~~~sn~V~ViD 370 (567)
T 1qks_A 295 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF----ITAANARNKLVVID 370 (567)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE----EEEEGGGTEEEEEE
T ss_pred cCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEE----EEEeCCCCeEEEEE
Confidence 125778888887654 45556679999999987644333222233357889999999973 35556788999999
Q ss_pred CCCceeeeeecc-----cCCCcEEEEECCCCCEE-EEEe-CCCcEEEEecCC-------ceeeeeeeccccCcceEEEEE
Q 016257 231 ISTWNKIGHKRL-----LRKPASVLSISLDGKYL-AMGS-KDGDICVVDVKK-------MEINHWSKRLHLGTSIALVEF 296 (392)
Q Consensus 231 ~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l-~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~i~~~~~ 296 (392)
+.+++.+..... |.+....+ ++|++..+ +++. .++.|.++|..+ .+.++.+.. . ...-..+..
T Consensus 371 ~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~-~-g~g~~~i~~ 447 (567)
T 1qks_A 371 TKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA-L-GGGSLFIKT 447 (567)
T ss_dssp TTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC-S-CSCCCCEEC
T ss_pred CCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec-C-CCCCEEEEe
Confidence 999887655543 22212122 57875544 4443 468999999987 556665532 2 233345778
Q ss_pred eeCCCeEEEEeC-------CCeEEEEEeecC
Q 016257 297 CPTQRVVLTASK-------EWGAMITKLTVP 320 (392)
Q Consensus 297 s~~~~~l~~~~~-------dg~i~iw~~~~~ 320 (392)
+|+++++.+... .++|.++|+...
T Consensus 448 ~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 448 HPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp CTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 999999888763 359999999866
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.78 E-value=1.5e-16 Score=134.43 Aligned_cols=242 Identities=7% Similarity=-0.011 Sum_probs=169.6
Q ss_pred CeeEEEEcCCCCeEE-EEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 016257 65 DPMTIAVNPSGDDFV-CSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 143 (392)
.+.+++++|+|+.++ +...++.|.+|+..+..... .. ..+...+.+++++++|+++++.. ++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~------~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LP------FNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CC------CCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-Ee------eCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCC
Confidence 788999999998666 44677889999865543211 10 11234678899999998666555 88999999876
Q ss_pred CceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc
Q 016257 144 LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (392)
Q Consensus 144 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d 223 (392)
.............+..++++++++++++...++.|.+|+..+......... ....+..+++++++.. .++...+
T Consensus 97 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l-----~v~~~~~ 170 (270)
T 1rwi_B 97 NNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT-GLNDPDGVAVDNSGNV-----YVTDTDN 170 (270)
T ss_dssp SCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC-SCCSCCCEEECTTCCE-----EEEEGGG
T ss_pred ceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc-cCCCceeEEEeCCCCE-----EEEECCC
Confidence 544322222335789999999999877777788999997655443222111 1225788999999873 4555567
Q ss_pred cEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeE
Q 016257 224 ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVV 303 (392)
Q Consensus 224 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 303 (392)
+.|.+||................+..++++++|.++++...++.|.+||..+....... ..+ ...+.+++++++|+++
T Consensus 171 ~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~-~~~-~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 171 NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP-FTG-LNTPLAVAVDSDRTVY 248 (270)
T ss_dssp TEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC-CCS-CSCEEEEEECTTCCEE
T ss_pred CEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec-cCC-CCCceeEEECCCCCEE
Confidence 89999999876554333333356889999999977777777889999998765543322 222 3578999999999988
Q ss_pred EEEeCCCeEEEEEeecCcc
Q 016257 304 LTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 304 ~~~~~dg~i~iw~~~~~~~ 322 (392)
++...++.|+++++..++.
T Consensus 249 v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 249 VADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEGGGTEEEEECCCGGGS
T ss_pred EEECCCCEEEEEcCCCccc
Confidence 8888999999999876543
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=3.3e-16 Score=136.46 Aligned_cols=254 Identities=11% Similarity=0.097 Sum_probs=172.3
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCC------------------CCcCceeEEEEcCCCCccccCCceEEEe-eCCCCC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRAS------------------SSPSVLEIFSFDPKTTSVYTSPLVTYVF-DESEGD 65 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~------------------~~~~~i~i~~~~~~~~~~~~~~~~~~~~-~~h~~~ 65 (392)
+.+.+++++|++ .+++.+.....- ..++ .++.++..+..+ ...+ .++-..
T Consensus 24 ~~v~~va~d~~G---~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~d~~~g~~------~~~~~~~~~~~ 92 (329)
T 3fvz_A 24 GQVSGVALDSKN---NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEED--TILVIDPNNAEI------LQSSGKNLFYL 92 (329)
T ss_dssp SCEEEEEECTTC---CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSC--CEEEECTTTCCE------EEEECTTTCSS
T ss_pred CCceEEEECCCC---CEEEEeCCCCeEEeeccCcceeecccccccccCC--cEEEEECCCCeE------EeccCCCccCC
Confidence 468999999987 345544332100 0012 255555543222 2222 245568
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEEeCCc-cceeeccccC--CCCCCCCCeEEEEecC-CCCEEEEEe-CCCcEEEEe
Q 016257 66 PMTIAVNPSGDDFVCSTTNGGCKLFEVYGGA-TDINLLAKKM--PPLQDAGPQKCLSFSV-DGSRFAAGG-VDGHLRIMH 140 (392)
Q Consensus 66 v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~--~~~~~~~~v~~~~~s~-~~~~l~~~~-~dg~i~i~d 140 (392)
+..++++|+|+++++...++.|++|+..... ....+..... ....+......++++| ++.++++.+ .++.|++|+
T Consensus 93 p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 93 PHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred ceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 9999999999988888888999999975442 2222211000 0012334689999999 788777776 689999999
Q ss_pred CCCCceeecccC----------CCCcEEEEEecCC-CCeEEEEcCCCcEEEEECCCCeeeEEEecC-CCcceEEEEecC-
Q 016257 141 WPSLRIILDEPK----------AHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRN-SDEKIELCRFSK- 207 (392)
Q Consensus 141 ~~~~~~~~~~~~----------~~~~i~~i~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~- 207 (392)
.+++.+..+.. .-.....++++|+ +.++++...++.|++||..+++.+..+... ....+..++|+|
T Consensus 173 -~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg 251 (329)
T 3fvz_A 173 -PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPG 251 (329)
T ss_dssp -TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETT
T ss_pred -CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCC
Confidence 55665544421 1124889999998 677777778899999999888888877532 334688999999
Q ss_pred -----CCCcceEEEEEEeCCccEEEEEeCCCceeeeeec---ccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 016257 208 -----DGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR---LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (392)
Q Consensus 208 -----~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 275 (392)
++.. .++...+..|++||..+++.+..+. .+......++++|+|.++++...++.|++|++..
T Consensus 252 ~~~~~~g~~-----~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 252 FLFAVNGKP-----YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEECCC-----CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEeCCCE-----EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 2221 1223345689999999998877763 4556789999999998888888899999999864
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.78 E-value=7e-15 Score=126.04 Aligned_cols=242 Identities=9% Similarity=0.033 Sum_probs=171.5
Q ss_pred eeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEE
Q 016257 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 138 (392)
+..+...+.+++++++|+.+++...++.|.+||.. ++. ...... .....+.++++.++|.++++...++.|..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~-----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLP-----TPDAKVMCLTISSDGEVWFTENAANKIGR 82 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECS-----STTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCC-----cccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence 34455789999999999877766667889999876 432 221111 12357899999999988777766888999
Q ss_pred EeCCCCcee-ecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEE
Q 016257 139 MHWPSLRII-LDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCT 217 (392)
Q Consensus 139 ~d~~~~~~~-~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 217 (392)
|+.. ++.. .........+..++++++++++++...++.|..||. +++............+..+++++++.. .
T Consensus 83 ~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l-----~ 155 (299)
T 2z2n_A 83 ITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNAL-----W 155 (299)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCE-----E
T ss_pred ECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCE-----E
Confidence 9976 3322 222223447899999999988888777889999998 554433222223346889999999863 3
Q ss_pred EEeCCccEEEEEeCCCceeeee-ecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEE
Q 016257 218 VQRGDKALLAVYDISTWNKIGH-KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEF 296 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 296 (392)
++...++.|..||. +++.... .......+..++++++|++.++...++.|.+||. +++........+ ...+.++++
T Consensus 156 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~ 232 (299)
T 2z2n_A 156 FTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTP-NARPHAITA 232 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEE
T ss_pred EEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCC-CCCceeEEE
Confidence 45556789999998 5554332 2223456789999999997777666788999999 666443322223 567899999
Q ss_pred eeCCCeEEEEeCCCeEEEEEe
Q 016257 297 CPTQRVVLTASKEWGAMITKL 317 (392)
Q Consensus 297 s~~~~~l~~~~~dg~i~iw~~ 317 (392)
+++|+++++...++.|..|+.
T Consensus 233 ~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 233 GAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CSTTCEEEEETTTTEEEEEET
T ss_pred CCCCCEEEeccCCceEEEECC
Confidence 999987776667789999987
No 184
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=1.1e-15 Score=130.41 Aligned_cols=235 Identities=6% Similarity=-0.035 Sum_probs=162.2
Q ss_pred CCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccC------CCCcEEEEEe-cCCCCeEEEEcC-CCcEEEEEC
Q 016257 112 AGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPK------AHKSVLDMDF-SLDSEFLATTST-DGSARIWKT 183 (392)
Q Consensus 112 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~i~~i~~-~~~~~~l~~~~~-d~~i~vwd~ 183 (392)
-..+.+++++++++++++...++.|.+||.+ ++....+.. +...+..+++ .++++++++... ++.|++||
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d- 106 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN- 106 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-
T ss_pred cCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-
Confidence 3568999999999988888889999999986 554443321 2246889999 467766666543 78999999
Q ss_pred CCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeec--ccCCCcEEEEECCCCCEEEE
Q 016257 184 EDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR--LLRKPASVLSISLDGKYLAM 261 (392)
Q Consensus 184 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~ 261 (392)
.+++.+..+.......+..++++|++.. .++...++.|.+||.. ++.+..+. .+...+..++++|+|+++++
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l-----~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKGRI-----IVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTSCE-----EEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred CCCcEEEEecCccCCCceEEEEeCCCCE-----EEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 5677776665444446899999999974 4666678899999965 44444443 23346889999999998888
Q ss_pred EeCCCcEEEEecCCceeeeeee-ccccCcceEEEEEeeCCCeEEEEeCCC-eEEEEEeecCccccceeeee---eeeeee
Q 016257 262 GSKDGDICVVDVKKMEINHWSK-RLHLGTSIALVEFCPTQRVVLTASKEW-GAMITKLTVPADWKEWQIYS---LLLALF 336 (392)
Q Consensus 262 ~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~---~~~~~~ 336 (392)
...++.|++||... +.+..+. .++ ...+..++++++|+++++...++ .|.+|+... .....+.... .+.+..
T Consensus 181 ~~~~~~i~~~~~~g-~~~~~~~~~g~-~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i~ 257 (286)
T 1q7f_A 181 DNRAHCVKVFNYEG-QYLRQIGGEGI-TNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISALESKVKHAQCFDVA 257 (286)
T ss_dssp EGGGTEEEEEETTC-CEEEEESCTTT-SCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEEEESSCCSCEEEEE
T ss_pred ECCCCEEEEEcCCC-CEEEEEccCCc-cCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEEEcccCCCCcceeEE
Confidence 77889999999754 4333332 122 35789999999999888888776 999998542 2211221110 122222
Q ss_pred e-eceEEEEeeecceeeeeccc
Q 016257 337 L-ASAVVFYIFFENSDSFWNFP 357 (392)
Q Consensus 337 ~-~~~~~~~~~~d~~i~~W~~~ 357 (392)
. ..+.++.+..++.|++|++.
T Consensus 258 ~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 258 LMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp EETTTEEEEEETTTEEEEEECS
T ss_pred ECCCCcEEEECCCCeEEEEEcc
Confidence 2 23345555678999999875
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.76 E-value=4.2e-14 Score=121.14 Aligned_cols=279 Identities=6% Similarity=-0.034 Sum_probs=183.5
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d 84 (392)
..+.++++.+++ .+.+.... ++. ++.+++. ... ....+..+...+.+++++++|+.+++...+
T Consensus 15 ~~~~~i~~d~~g---~l~v~~~~------~~~--v~~~d~~-~~~-----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 77 (299)
T 2z2n_A 15 TGPYGITVSDKG---KVWITQHK------ANM--ISCINLD-GKI-----TEYPLPTPDAKVMCLTISSDGEVWFTENAA 77 (299)
T ss_dssp CCEEEEEECTTS---CEEEEETT------TTE--EEEECTT-CCE-----EEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CCccceEECCCC---CEEEEecC------CCc--EEEEcCC-CCe-----EEecCCcccCceeeEEECCCCCEEEeCCCC
Confidence 467888888876 33332221 122 4555544 211 112223345789999999999877776667
Q ss_pred CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeec-ccCCCCcEEEEEec
Q 016257 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMDFS 163 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~~ 163 (392)
+.|..|+.. ++ ...+.. + .....+..+++.++++++++...++.|..||. +++.... .......+..++++
T Consensus 78 ~~i~~~~~~-g~-~~~~~~---~--~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 78 NKIGRITKK-GI-IKEYTL---P--NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLG 149 (299)
T ss_dssp TEEEEECTT-SC-EEEEEC---S--STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred CeEEEECCC-Cc-EEEEeC---C--CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEc
Confidence 889999865 22 111111 0 13457899999999988777777889999998 5544322 22233468999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeee-ecc
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH-KRL 242 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-~~~ 242 (392)
++++.+++...++.|..||. +++............+..+++++++.. .++...++.|.+||. +++.... ...
T Consensus 150 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l-----~v~~~~~~~i~~~~~-~g~~~~~~~~~ 222 (299)
T 2z2n_A 150 SDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDAL-----WFVEIIGNKIGRITT-SGEITEFKIPT 222 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE-----EEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred CCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCE-----EEEccCCceEEEECC-CCcEEEEECCC
Confidence 99988887777789999998 665543222222345789999999873 355556788999999 5554322 222
Q ss_pred cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
....+.+++++++|++.++...++.|..||. +++........+ ...+.++++ ++|+++++.+ .+.+..++...
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~-~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIK-SAEPHGICF-DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSS-SCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred CCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCC-CCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence 3467889999999987666657788999998 455433322233 567899999 8888766655 56676666553
No 186
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.76 E-value=2.1e-14 Score=126.59 Aligned_cols=242 Identities=7% Similarity=-0.090 Sum_probs=163.1
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC--CCc
Q 016257 68 TIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV--DGH 135 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~ 135 (392)
.++++|||++++++. .++.|.+||..+.+....+................+.|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 999999999999876 36779999998776554443210011111123468999999999998874 478
Q ss_pred EEEEeCCCCceeec-ccCCCCcEEEEEecCCC-CeEEEEcCCCcEEEEECCCCeeeEEEe-----cCCCcceEEEEecCC
Q 016257 136 LRIMHWPSLRIILD-EPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTEDGVAWTFLT-----RNSDEKIELCRFSKD 208 (392)
Q Consensus 136 i~i~d~~~~~~~~~-~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~-----~~~~~~v~~~~~~~~ 208 (392)
|.++| ++++.+.. +... . ++.+.|++ +.+++.+.||.+.++|. +++...... ...........+.++
T Consensus 150 v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 99887765 4322 2 24455654 45667778999999999 777663322 111111123456676
Q ss_pred CCcceEEEEEEeCCccEEEEEeCCCcee--eeeecc----------cCCCcEEEEECCCCCEEEEEeC----------CC
Q 016257 209 GTKPFLFCTVQRGDKALLAVYDISTWNK--IGHKRL----------LRKPASVLSISLDGKYLAMGSK----------DG 266 (392)
Q Consensus 209 ~~~~~~~~~~~~~~d~~i~v~d~~~~~~--~~~~~~----------~~~~v~~~~~s~~~~~l~~~~~----------dg 266 (392)
+.. ++..+..+.+.+.|+..... +..+.. .......++++|+++.+++... ++
T Consensus 224 ~~~-----~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 224 SGR-----IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred CCE-----EEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 654 22233567899999875422 122111 1123445789999998888653 35
Q ss_pred cEEEEecCCceeeeeeeccccCcceEEEEEeeCCC-eEEEEe-CCCeEEEEEeecCccc
Q 016257 267 DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR-VVLTAS-KEWGAMITKLTVPADW 323 (392)
Q Consensus 267 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~iw~~~~~~~~ 323 (392)
.|.++|..+++.+..+.. .....+++|+|||+ .++++. .++.|.++|+...+..
T Consensus 299 ~V~VID~~t~~vv~~i~~---g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQISL---GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred eEEEEECCCCEEEEEEEC---CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 799999999999887743 34689999999999 777777 5899999999866543
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=2.5e-15 Score=130.66 Aligned_cols=236 Identities=10% Similarity=-0.035 Sum_probs=167.5
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCC
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWP 142 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~ 142 (392)
..+..+.+. +++.+++...++.|.+||..+++....+. .......+++++++ .++++. .++.|.+||.+
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~--------~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~ 113 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT--------GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPK 113 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE--------CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETT
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC--------CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECC
Confidence 346777774 34455555667899999999887655542 23467899999998 455555 78999999999
Q ss_pred CCceeecccCCC-----CcEEEEEecCCCCeEEEEc--CCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 143 SLRIILDEPKAH-----KSVLDMDFSLDSEFLATTS--TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 143 ~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
+++....+.... .....+++ +++.++++. .++.|.++|+++++.+..+.... ....++++|+++.
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~--~p~~i~~~~dG~l---- 185 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI--QPTSLVMDKYNKM---- 185 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS--CBCCCEECTTSEE----
T ss_pred CCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC--CccceEEcCCCCE----
Confidence 988765443322 14456677 344555544 48899999999998888776532 4678999999874
Q ss_pred EEEEeCCc----------cEEEEEeCCCceeeeeeccc-CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee-e
Q 016257 216 CTVQRGDK----------ALLAVYDISTWNKIGHKRLL-RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS-K 283 (392)
Q Consensus 216 ~~~~~~~d----------~~i~v~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~ 283 (392)
.+++..+ +.|.++|..+++....+... ......++++|+++.|+++.. .|.+||..+++..... .
T Consensus 186 -~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~ 262 (328)
T 3dsm_A 186 -WTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFL 262 (328)
T ss_dssp -EEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSB
T ss_pred -EEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeee
Confidence 3444433 78999999988876555432 346889999999999988765 8999999988764321 1
Q ss_pred ccccCcceEEEEEee-CCCeEEEE----eCCCeEEEEEeecCcc
Q 016257 284 RLHLGTSIALVEFCP-TQRVVLTA----SKEWGAMITKLTVPAD 322 (392)
Q Consensus 284 ~~~~~~~i~~~~~s~-~~~~l~~~----~~dg~i~iw~~~~~~~ 322 (392)
... ......++++| ++.++++. ..++.|.+|+.. ++.
T Consensus 263 ~~~-~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 263 EFR-DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp CCC-SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred cCC-CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence 111 35789999999 45555555 567899999987 443
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=3.2e-16 Score=138.07 Aligned_cols=233 Identities=10% Similarity=-0.004 Sum_probs=152.6
Q ss_pred CCCeEEEEe------CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC----------CCcEE
Q 016257 74 SGDDFVCST------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV----------DGHLR 137 (392)
Q Consensus 74 ~~~~l~~~~------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----------dg~i~ 137 (392)
+++++++.. .|+.|.+||..+++....+.. +..+ .++|+|||++++++.. ++.|.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~-------g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~ 84 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT-------AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVE 84 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC-------CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecC-------CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEE
Confidence 555565543 367899999887765443322 1223 8999999999998863 56799
Q ss_pred EEeCCCCceeecccCC------CCcEEEEEecCCCCeEEEEcC--CCcEEEEECCCCeeeEE-EecCCC--------cce
Q 016257 138 IMHWPSLRIILDEPKA------HKSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTF-LTRNSD--------EKI 200 (392)
Q Consensus 138 i~d~~~~~~~~~~~~~------~~~i~~i~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~--------~~v 200 (392)
+||..+++.+..+... ......++++|||++|+++.. +++|.+||+++++.+.. +..... ...
T Consensus 85 v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~ 164 (361)
T 2oiz_A 85 VWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPR 164 (361)
T ss_dssp EEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSS
T ss_pred EEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCe
Confidence 9999988876655322 134667899999999998864 57899999999988776 432110 001
Q ss_pred EEEEecCCCCcceEE---------------------------------EEEEeCCccEEEEEeCCCceee--eeecc---
Q 016257 201 ELCRFSKDGTKPFLF---------------------------------CTVQRGDKALLAVYDISTWNKI--GHKRL--- 242 (392)
Q Consensus 201 ~~~~~~~~~~~~~~~---------------------------------~~~~~~~d~~i~v~d~~~~~~~--~~~~~--- 242 (392)
.-+++++++...++. .++..+.++.+.++|+...... ..+..
T Consensus 165 ~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~ 244 (361)
T 2oiz_A 165 SFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLND 244 (361)
T ss_dssp EEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCH
T ss_pred eEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCc
Confidence 112233333211000 0112223456777776543211 11100
Q ss_pred ---c----CCCcEEEEECCCCCEEEEEeC-----------CCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEE
Q 016257 243 ---L----RKPASVLSISLDGKYLAMGSK-----------DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVL 304 (392)
Q Consensus 243 ---~----~~~v~~~~~s~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 304 (392)
. ......++++|+++.++++.. .+.|.+||+.+++.+..+. .+ . +.+++|+|||++|+
T Consensus 245 ~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~-~~-~--p~~ia~spdg~~l~ 320 (361)
T 2oiz_A 245 EDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP-GR-D--ALSMTIDQQRNLML 320 (361)
T ss_dssp HHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE-CT-T--CCEEEEETTTTEEE
T ss_pred cccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe-cC-C--eeEEEECCCCCEEE
Confidence 0 011123789999888887653 3479999999999988774 44 3 99999999999999
Q ss_pred EEeCCCeEEEEEeecC
Q 016257 305 TASKEWGAMITKLTVP 320 (392)
Q Consensus 305 ~~~~dg~i~iw~~~~~ 320 (392)
+++. +.|.+||....
T Consensus 321 v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 321 TLDG-GNVNVYDISQP 335 (361)
T ss_dssp EECS-SCEEEEECSSS
T ss_pred EeCC-CeEEEEECCCC
Confidence 8887 99999998865
No 189
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.74 E-value=5.5e-16 Score=149.89 Aligned_cols=244 Identities=12% Similarity=0.028 Sum_probs=158.9
Q ss_pred CCCCeeEEEEcCCCCeEEEEeCC-----CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCc-
Q 016257 62 SEGDPMTIAVNPSGDDFVCSTTN-----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH- 135 (392)
Q Consensus 62 h~~~v~~~~~sp~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~- 135 (392)
|...+..++|||||++||.+..+ ..|++||+.+++....... ...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~--------~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK--------WVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE--------EEESCCCEESTT-SEEEEEECCCC-
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC--------CceeccEEEECC-CEEEEEEecCcc
Confidence 44468899999999999877543 3699999988875332111 111357899999 99988876654
Q ss_pred -------------EEEEeCCCCce----eecccCCCCcEEEEEecCCCCeEEEEcCCC-----cEEEEECCCC--eeeEE
Q 016257 136 -------------LRIMHWPSLRI----ILDEPKAHKSVLDMDFSLDSEFLATTSTDG-----SARIWKTEDG--VAWTF 191 (392)
Q Consensus 136 -------------i~i~d~~~~~~----~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~-----~i~vwd~~~~--~~~~~ 191 (392)
|++|++.++.. +.....+...+..+.|+|||++|+..+.++ .|++||+.++ +....
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 311 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTA 311 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEE
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEE
Confidence 88999877652 222222223588999999999988776543 7999999876 31455
Q ss_pred EecCCCcceEEEEecCCCCcceEEEEEEe--CCccEEEEEeCCCc--eeeeeecccCCCcEEEEECCCCCEEEEEeCCCc
Q 016257 192 LTRNSDEKIELCRFSKDGTKPFLFCTVQR--GDKALLAVYDISTW--NKIGHKRLLRKPASVLSISLDGKYLAMGSKDGD 267 (392)
Q Consensus 192 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~d~~i~v~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 267 (392)
+..+.. ..... ++|++..++ +.+. ..++.|.+||+.++ +....+..+...+..++++ ++.++++...|+.
T Consensus 312 l~~~~~-~~~~~-~~~dg~~l~---~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 385 (741)
T 1yr2_A 312 LIPDLK-AQWDF-VDGVGDQLW---FVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK 385 (741)
T ss_dssp EECSSS-SCEEE-EEEETTEEE---EEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE
T ss_pred ecCCCC-ceEEE-EeccCCEEE---EEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 554443 33444 348888632 1221 23567999999874 2333333344456677877 5677888888888
Q ss_pred EEEEecC-CceeeeeeeccccCcceEEEEEeeCCCeEEEE-e---CCCeEEEEEeecCc
Q 016257 268 ICVVDVK-KMEINHWSKRLHLGTSIALVEFCPTQRVVLTA-S---KEWGAMITKLTVPA 321 (392)
Q Consensus 268 i~iwd~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~---~dg~i~iw~~~~~~ 321 (392)
.+||.+. +++....+...+ .+.+..++++|+++.|+.. + ..+.+++|++..+.
T Consensus 386 ~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 386 SQVLAFDLDGKPAGAVSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEEEETTSCEEEECBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEEEeCCCCceeeccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 7777554 344444442223 5678999999998866533 2 24788999886543
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.73 E-value=6e-15 Score=124.63 Aligned_cols=217 Identities=7% Similarity=-0.064 Sum_probs=166.8
Q ss_pred CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCC
Q 016257 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (392)
Q Consensus 74 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 153 (392)
.++.|++++.++.|++||.++++...++.... ...+.++.++|+|++++ +.++.|..||. +++.+.++..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~------~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK------GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT------TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc------cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence 35789999999999999988888766654321 13578999999999888 34778999998 78887777654
Q ss_pred C-CcEEEEEecCCCCeEEEEcC-CCcEEEEECCCCeeeEEEecCCC-----cceEEEEecCCCCcceEEEEEEeCCccEE
Q 016257 154 H-KSVLDMDFSLDSEFLATTST-DGSARIWKTEDGVAWTFLTRNSD-----EKIELCRFSKDGTKPFLFCTVQRGDKALL 226 (392)
Q Consensus 154 ~-~~i~~i~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~d~~i 226 (392)
. ..+.++.+.++|+.+++.+. ++.+..+|. +++.+..+..... .....+++.+++.. +++...++.|
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~-----lv~~~~~~~v 148 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY-----LVPLFATSEV 148 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE-----EEEETTTTEE
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE-----EEEecCCCEE
Confidence 3 37889999999999998877 777888885 6777766643211 23456678899986 6788889999
Q ss_pred EEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccc----cCcceEEEEEeeCCCe
Q 016257 227 AVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLH----LGTSIALVEFCPTQRV 302 (392)
Q Consensus 227 ~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~ 302 (392)
..||.+ ++.+..+... ....++...++|+++++++.+++|..+|..+++.+..+.... .-..+..+...++|.+
T Consensus 149 ~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i 226 (276)
T 3no2_A 149 REIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGL 226 (276)
T ss_dssp EEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCE
T ss_pred EEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCE
Confidence 999998 8887776654 345567888999999999988899999999999877664221 0123788888999998
Q ss_pred EEEEe
Q 016257 303 VLTAS 307 (392)
Q Consensus 303 l~~~~ 307 (392)
+++..
T Consensus 227 ~v~~~ 231 (276)
T 3no2_A 227 YICNW 231 (276)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87774
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=1.4e-15 Score=130.47 Aligned_cols=240 Identities=10% Similarity=0.054 Sum_probs=160.6
Q ss_pred eeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCe
Q 016257 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (392)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~ 86 (392)
..+++|+|++.. +++++.. ++. |+.+++.+. ...+..+...+.+++++|+|+++++...++.
T Consensus 30 ~eg~~~d~~g~~--l~~~~~~------~~~--i~~~~~~~~--------~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 30 TEGPVYVPARSA--VIFSDVR------QNR--TWAWSDDGQ--------LSPEMHPSHHQNGHCLNKQGHLIACSHGLRR 91 (296)
T ss_dssp EEEEEEEGGGTE--EEEEEGG------GTE--EEEEETTSC--------EEEEESSCSSEEEEEECTTCCEEEEETTTTE
T ss_pred ccCCeEeCCCCE--EEEEeCC------CCE--EEEEECCCC--------eEEEECCCCCcceeeECCCCcEEEEecCCCe
Confidence 467889998753 3443333 233 455554432 2335556788999999999998877766788
Q ss_pred EEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE----e-------------CCCcEEEEeCCCCceeec
Q 016257 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG----G-------------VDGHLRIMHWPSLRIILD 149 (392)
Q Consensus 87 i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~-------------~dg~i~i~d~~~~~~~~~ 149 (392)
|.+||..+++......... ......+..++++|+|+++++. + ..+.|..++.. ++. ..
T Consensus 92 i~~~d~~~g~~~~~~~~~~---~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~ 166 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFE---GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SA 166 (296)
T ss_dssp EEEECSTTCCEEEEECEET---TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EE
T ss_pred EEEEcCCCCcEEEEeeccC---CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EE
Confidence 9999986665322211100 0112356789999999988873 2 12456666554 333 33
Q ss_pred ccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECC-CCee---eEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccE
Q 016257 150 EPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE-DGVA---WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKAL 225 (392)
Q Consensus 150 ~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~-~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~ 225 (392)
...+......++|+|+++.+++.+.++.|++|++. +++. ...+ ......+..++++++|.. ..+. ++.
T Consensus 167 ~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l------~v~~-~~~ 238 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLI------WASA-GDG 238 (296)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCE------EEEE-TTE
T ss_pred eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCE------EEEc-CCe
Confidence 34444567899999999988777788999999986 4443 2333 223345678999999983 3333 788
Q ss_pred EEEEeCCCceeeeeecccCCCcEEEEE-CCCCCEEEEEeCCCcEEEEecCCceeee
Q 016257 226 LAVYDISTWNKIGHKRLLRKPASVLSI-SLDGKYLAMGSKDGDICVVDVKKMEINH 280 (392)
Q Consensus 226 i~v~d~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 280 (392)
|.+||.. ++.+..+..+.. +++++| +|+++.|++++.++ +.-++.++.++.+
T Consensus 239 v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 239 VHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGLEH 291 (296)
T ss_dssp EEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBCCC
T ss_pred EEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccccc
Confidence 9999987 666666666666 889999 68999999988764 6666776665543
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=3.5e-15 Score=129.80 Aligned_cols=266 Identities=9% Similarity=-0.019 Sum_probs=178.0
Q ss_pred CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEe
Q 016257 83 TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDF 162 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~ 162 (392)
.++.|.++|..+++.......... ..........+.+. +++..++...++.|.++|.++++.+.++. .......+++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n-~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~ 91 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRAN-GFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHF 91 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHH-SSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhc-CcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEE
Confidence 378899999988775443321100 01122345777774 34455555567999999999999876663 3356889999
Q ss_pred cCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCC----cceEEEEecCCCCcceEEEEEEeC-CccEEEEEeCCCceee
Q 016257 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD----EKIELCRFSKDGTKPFLFCTVQRG-DKALLAVYDISTWNKI 237 (392)
Q Consensus 163 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~-~d~~i~v~d~~~~~~~ 237 (392)
+++++.+++...++.|.+||..+++....+..... .....+++ ++..+ .++.. .++.|.++|.++++.+
T Consensus 92 ~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~l----yv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 92 LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYV----YVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEE----EEEECTTCCEEEEEETTTTEEE
T ss_pred eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEE----EEEcCCCCCEEEEEECCCCeEE
Confidence 99885444444789999999999988877764431 13556777 34442 23333 4889999999998877
Q ss_pred eeecccCCCcEEEEECCCCCEEEEEeCC----------CcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEe
Q 016257 238 GHKRLLRKPASVLSISLDGKYLAMGSKD----------GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTAS 307 (392)
Q Consensus 238 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 307 (392)
..+.. ......++++|+|++++++..+ +.|.++|..+++....+.... ......++|+|+++.|+++.
T Consensus 166 ~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 166 DELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTTSCEEEEES
T ss_pred EEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecCCCEEEEEc
Confidence 66654 3345678999999977776654 789999999998776654322 34789999999999888876
Q ss_pred CCCeEEEEEeecCcccc--ceee-eeeeeeeeee--ceEEEEee-----ecceeeeecccccccc
Q 016257 308 KEWGAMITKLTVPADWK--EWQI-YSLLLALFLA--SAVVFYIF-----FENSDSFWNFPVARNQ 362 (392)
Q Consensus 308 ~dg~i~iw~~~~~~~~~--~~~~-~~~~~~~~~~--~~~~~~~~-----~d~~i~~W~~~~~~~~ 362 (392)
. .|.++|....+... .... ...+.+.... .+.++.+. .++.|.+|+.. ++.+
T Consensus 244 ~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 244 N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred c--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 5 78888886544211 1111 1234444443 34444443 47889999987 6644
No 193
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.71 E-value=8.6e-15 Score=127.46 Aligned_cols=247 Identities=12% Similarity=0.012 Sum_probs=164.2
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC--CCc
Q 016257 68 TIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV--DGH 135 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~ 135 (392)
.++++|||+++++++ .++.|.+||..+.+....+....-...........+.|+|||++++++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999888775 36779999999887665553221011111234577999999999998864 689
Q ss_pred EEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCC-CeeeEEEecCC---CcceE-EEEec-CCC
Q 016257 136 LRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTED-GVAWTFLTRNS---DEKIE-LCRFS-KDG 209 (392)
Q Consensus 136 i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~---~~~v~-~~~~~-~~~ 209 (392)
|.++|+.+++.+.++.-.. . ...+....+.+++.+.||++.+.++.. ++......... ..++. ...|. ++|
T Consensus 162 VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 9999999998876664321 1 122333445677778888888888875 55432221111 11221 23554 566
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCce--eeeeec----------ccCCCcEEEEECCCCCEEEEEeC----------CCc
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWN--KIGHKR----------LLRKPASVLSISLDGKYLAMGSK----------DGD 267 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~--~~~~~~----------~~~~~v~~~~~s~~~~~l~~~~~----------dg~ 267 (392)
+. +..+.++.+++.|+.+.. ....+. ........++++++++.++.... .+.
T Consensus 239 ~~------~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~ 312 (386)
T 3sjl_D 239 RL------VWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRF 312 (386)
T ss_dssp EE------EEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEE
T ss_pred cE------EEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCE
Confidence 53 334557899999997653 222221 01223445788999998888653 246
Q ss_pred EEEEecCCceeeeeeeccccCcceEEEEEeeCCC-eEEEEe-CCCeEEEEEeecCccccce
Q 016257 268 ICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR-VVLTAS-KEWGAMITKLTVPADWKEW 326 (392)
Q Consensus 268 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~iw~~~~~~~~~~~ 326 (392)
|.++|+++++.+..+.. ...+.++++++|++ +|+++. .++.|.++|....+..+.+
T Consensus 313 V~viD~~t~kv~~~i~v---g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 313 VVVLDAKTGERLAKFEM---GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp EEEEETTTCCEEEEEEE---EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCeEEEEEEC---CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 99999999999988765 34788999999997 666654 5899999999866554433
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=2.2e-15 Score=144.62 Aligned_cols=240 Identities=13% Similarity=0.029 Sum_probs=152.8
Q ss_pred cCCCCeEEEEeCCC---eEEEEEEeCCc-cceeeccccCCCCCCCCCeEEEEecCCCCEEEEE-----eCCCcEEEEeCC
Q 016257 72 NPSGDDFVCSTTNG---GCKLFEVYGGA-TDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-----GVDGHLRIMHWP 142 (392)
Q Consensus 72 sp~~~~l~~~~~d~---~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-----~~dg~i~i~d~~ 142 (392)
+|+|++++....++ .-.+|...... ....+.........|...+..++|||||++|+.+ +.+..|++||++
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47899888766544 35566655322 1222221111111234568899999999999843 345689999999
Q ss_pred CCcee-ecccCCCCcEEEEEecCCCCeEEEEcCCCc-------------EEEEECCCCeee--EEEec-CCCcceEEEEe
Q 016257 143 SLRII-LDEPKAHKSVLDMDFSLDSEFLATTSTDGS-------------ARIWKTEDGVAW--TFLTR-NSDEKIELCRF 205 (392)
Q Consensus 143 ~~~~~-~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~-------------i~vwd~~~~~~~--~~~~~-~~~~~v~~~~~ 205 (392)
+++.. ...... .....++|+|||+.|+.++.|.. |++|++.++... ..+.. .+...+..+.|
T Consensus 156 tg~~~~~~~~~~-~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 156 SGEWSKVDVIEG-GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp TCCBCSSCCBSC-CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCCcCCcccCc-ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 98764 211111 11267899999999999888766 999999877632 22222 12236789999
Q ss_pred cCCCCcceEEEEEEeC-CccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeC----CCcEEEEecCCcee--
Q 016257 206 SKDGTKPFLFCTVQRG-DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSK----DGDICVVDVKKMEI-- 278 (392)
Q Consensus 206 ~~~~~~~~~~~~~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~~~-- 278 (392)
+|||+++++ ..... ....|.++|..+++. ..+..+...+....+ ++|. ++..+. ++.|.+||+.+++.
T Consensus 235 SpDG~~l~~--~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 235 SRDGKYLFV--YILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp CTTSCCEEE--EEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG
T ss_pred CCCCCEEEE--EEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC
Confidence 999987321 11111 234788887765543 334444455666666 5666 544443 57899999987653
Q ss_pred -eeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 279 -NHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 279 -~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
...+ ..+....+..++|+ ++.++++...|+..++|.+..
T Consensus 310 ~~~l~-~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 310 WKEIV-PEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp CEEEE-CCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred CeEEe-cCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 2222 22214568889998 778889999999999998874
No 195
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=3.2e-15 Score=130.42 Aligned_cols=239 Identities=8% Similarity=-0.032 Sum_probs=165.2
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 143 (392)
..|.++.|+|++..++..+.++.++.|. .+....+. .+...+.+++|+++|++++++..++.|.+||.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEIS-------KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEE-------SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred cccceeeecCCccceeEEeecccCcccc---cceeEEEe-------ccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 4577888999887777767778888882 22121221 1334678999999999878888889999999988
Q ss_pred CceeecccCCCCcEEEEEecCCCCeEEEEcCC----CcEEEEECCCCeeeEEEe-cCCCcceEEEEecCCCCcceEEEEE
Q 016257 144 LRIILDEPKAHKSVLDMDFSLDSEFLATTSTD----GSARIWKTEDGVAWTFLT-RNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 144 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
++.......+...+.+++++|+++++++...+ +.|.+||.++++....+. ......+..++++|++.. .+
T Consensus 76 ~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l-----~v 150 (333)
T 2dg1_A 76 KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGF-----YF 150 (333)
T ss_dssp CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCE-----EE
T ss_pred CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCE-----EE
Confidence 77654332445679999999999988877666 689999998776543332 122346889999999874 23
Q ss_pred EeCC------ccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEE-eCCCcEEEEecCC-ceeeee-----eecc
Q 016257 219 QRGD------KALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMG-SKDGDICVVDVKK-MEINHW-----SKRL 285 (392)
Q Consensus 219 ~~~~------d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~-~~~~~~-----~~~~ 285 (392)
+... .+.|..+|..+++... +......+..++|+|+|+.|+.+ +.++.|.+||+.+ ++.... ....
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~ 229 (333)
T 2dg1_A 151 TDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYF 229 (333)
T ss_dssp EECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEEC
T ss_pred EeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEec
Confidence 3332 3677778776544432 22223457889999999866554 4578999999964 322211 1011
Q ss_pred ccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 286 HLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 286 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
.....+..++++++|+++++...++.|.+|+..
T Consensus 230 ~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 230 TGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp CSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 102367889999999988888888999999874
No 196
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=8.7e-15 Score=140.90 Aligned_cols=250 Identities=11% Similarity=-0.009 Sum_probs=162.2
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCC
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~ 85 (392)
.+..++|+||++.+.+....++. ....|.+|+++ +... ....+.+ ..+..++|+|||+.|+.++.++
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~----~~~~i~v~d~~--tg~~-----~~~~~~~--~~~~~~~wspDg~~l~~~~~~~ 192 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGS----DWVTIKFMKVD--GAKE-----LPDVLER--VKFSCMAWTHDGKGMFYNAYPQ 192 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTC----SCEEEEEEETT--TTEE-----EEEEEEE--ECSCCEEECTTSSEEEEEECCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCC----ceEEEEEEECC--CCCC-----CcccccC--cccceEEEEeCCCEEEEEEECC
Confidence 57889999999764433321110 11245555543 3222 1112222 2367899999999999988776
Q ss_pred e----------------EEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC-----CCcEEEEeCCC-
Q 016257 86 G----------------CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-----DGHLRIMHWPS- 143 (392)
Q Consensus 86 ~----------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~i~d~~~- 143 (392)
. |++|++.+++....+.... ..+...+..+.|+|||++|+..+. +..|++||+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~---~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 269 (710)
T 2xdw_A 193 QDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF---PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE 269 (710)
T ss_dssp CSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC---TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred ccccccccccccCCCCEEEEEECCCCcccceEEecc---CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccc
Confidence 5 9999987765322222111 113445789999999999988764 56899999976
Q ss_pred -----Cc-eeecccCCCCcEEEEEecCCCCeEEEEcCC----CcEEEEECCCCe--eeEEEecCCC-cceEEEEecCCCC
Q 016257 144 -----LR-IILDEPKAHKSVLDMDFSLDSEFLATTSTD----GSARIWKTEDGV--AWTFLTRNSD-EKIELCRFSKDGT 210 (392)
Q Consensus 144 -----~~-~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d----~~i~vwd~~~~~--~~~~~~~~~~-~~v~~~~~~~~~~ 210 (392)
+. ....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++. ....+..+.. ..+..++|++++.
T Consensus 270 ~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 270 SNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp SSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE
T ss_pred ccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE
Confidence 42 23344444444444 488999887766543 369999998764 2344544433 3688899986554
Q ss_pred cceEEEEEEeCCcc--EEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe----CCCcEEEEecCCce
Q 016257 211 KPFLFCTVQRGDKA--LLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS----KDGDICVVDVKKME 277 (392)
Q Consensus 211 ~~~~~~~~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~iwd~~~~~ 277 (392)
. +++...++ .|.+||+.+++.+..+..+...+..++++|+++.++... ..+.|+.||+.+++
T Consensus 349 l-----v~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 349 L-----VLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp E-----EEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred E-----EEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 3 45555555 577788877776666766677788899999987766442 34789999998876
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.69 E-value=5.6e-13 Score=114.15 Aligned_cols=277 Identities=9% Similarity=-0.019 Sum_probs=178.7
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d 84 (392)
....++++.+++ .+.+.... ++. +..+++. ... ....+..+...+.++++.++++.+++...+
T Consensus 20 ~~p~~i~~d~~g---~l~v~~~~------~~~--v~~~~~~-~~~-----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 82 (300)
T 2qc5_A 20 SGPYGITSSEDG---KVWFTQHK------ANK--ISSLDQS-GRI-----KEFEVPTPDAKVMCLIVSSLGDIWFTENGA 82 (300)
T ss_dssp CCEEEEEECTTS---CEEEEETT------TTE--EEEECTT-SCE-----EEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CCcceeeECCCC---CEEEEcCC------CCe--EEEECCC-Cce-----EEEECCCCCCcceeEEECCCCCEEEEecCC
Confidence 456778888876 33332222 222 4445544 222 112233345679999999999877776667
Q ss_pred CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceee-cccCCCCcEEEEEec
Q 016257 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL-DEPKAHKSVLDMDFS 163 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~i~~i~~~ 163 (392)
+.|..+|.. ++. ..+... .....+..+++.++|+++++...++.|..++.. ++... ........+..++++
T Consensus 83 ~~v~~~d~~-g~~-~~~~~~-----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 83 NKIGKLSKK-GGF-TEYPLP-----QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG 154 (300)
T ss_dssp TEEEEECTT-SCE-EEEECS-----STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC
T ss_pred CeEEEECCC-CCe-EEecCC-----CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEEC
Confidence 889999866 332 111111 123568999999999887777667889999987 55432 222234578999999
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeee-ecc
Q 016257 164 LDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH-KRL 242 (392)
Q Consensus 164 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-~~~ 242 (392)
++++++++...++.|..+|. +++............+..+++++++.. .++....+.|.+||. +++.... ...
T Consensus 155 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l-----~v~~~~~~~i~~~~~-~g~~~~~~~~~ 227 (300)
T 2qc5_A 155 SDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGAL-----WFVEIMGNKIGRITT-TGEISEYDIPT 227 (300)
T ss_dssp TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE-----EEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred CCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCE-----EEEccCCCEEEEEcC-CCcEEEEECCC
Confidence 99997777666788999998 555443222122335889999998863 345556678999998 4443322 223
Q ss_pred cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEe
Q 016257 243 LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKL 317 (392)
Q Consensus 243 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 317 (392)
....+.+++++++|++.++...++.|..||. +++......... ...+.+++++++|+++++.. . .|..++.
T Consensus 228 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTE-NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCST-TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCcc-CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 3456889999999987666666788999998 454433221222 45688999999998665554 4 5555554
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=1.8e-14 Score=121.62 Aligned_cols=203 Identities=8% Similarity=-0.006 Sum_probs=143.9
Q ss_pred CCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeC
Q 016257 62 SEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW 141 (392)
Q Consensus 62 h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 141 (392)
+...+.+++++++|+.+++.. ++.|.+|+....... ... ......+..++++++|+++++...++.|.+|+.
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 136 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLP------FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA 136 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECC------CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eee------cCCcCCCcceEECCCCCEEEEECCCCEEEEEEC
Confidence 345788999999998655554 888999987654321 111 012246899999999987777777889999986
Q ss_pred CCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeC
Q 016257 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221 (392)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (392)
.+.............+.+++++++++++++...++.|.+||.............. ..+..+++++++.. .++..
T Consensus 137 ~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l-----~v~~~ 210 (270)
T 1rwi_B 137 GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTV-----YVTEH 210 (270)
T ss_dssp TCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCE-----EEEET
T ss_pred CCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCC-CCceEEEECCCCCE-----EEEEC
Confidence 6554433222333467889999999977777778899999987665433222222 46889999999853 45556
Q ss_pred CccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCcee
Q 016257 222 DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278 (392)
Q Consensus 222 ~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 278 (392)
.++.|.+||................+.+++++++|+++++...++.|+++++...+.
T Consensus 211 ~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 211 NTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp TTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 678899999876543322222235688999999999888888899999999876553
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.69 E-value=1e-13 Score=119.74 Aligned_cols=246 Identities=14% Similarity=0.069 Sum_probs=165.3
Q ss_pred CCCCCeeEEEEcCCCCeEEE-------EeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC-CCEEEEEeC
Q 016257 61 ESEGDPMTIAVNPSGDDFVC-------STTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD-GSRFAAGGV 132 (392)
Q Consensus 61 ~h~~~v~~~~~sp~~~~l~~-------~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~ 132 (392)
..-..+.+++|+++++.+++ +..++.|.+|+..+++... +.... ...+...+.+++++++ ++++++ +.
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~--~~~~~~~~~~i~~~~~~g~l~v~-~~ 90 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPE--VNGYGGIPAGCQCDRDANQLFVA-DM 90 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCE--ETTEECCEEEEEECSSSSEEEEE-ET
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecc--cCCCCCCCceEEEecCCCcEEEE-EC
Confidence 33456789999999987777 5778889999876665321 11100 0012356899999999 754444 44
Q ss_pred CCcEEEEeCCCCceeec-ccC----CCCcEEEEEecCCCCeEEEEcCC---------------CcEEEEECCCCeeeEEE
Q 016257 133 DGHLRIMHWPSLRIILD-EPK----AHKSVLDMDFSLDSEFLATTSTD---------------GSARIWKTEDGVAWTFL 192 (392)
Q Consensus 133 dg~i~i~d~~~~~~~~~-~~~----~~~~i~~i~~~~~~~~l~~~~~d---------------~~i~vwd~~~~~~~~~~ 192 (392)
.+.|.+||.+ ++.... ... ....+.+++++++|+++++...+ +.|..+|.. ++.....
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 5579999988 665432 211 11358899999999887776654 567777765 4443322
Q ss_pred ecCCCcceEEEEec----CCCCcceEEEEEEeCCccEEEEEeCC-Ccee-----eeeecccC-CCcEEEEECCCCCEEEE
Q 016257 193 TRNSDEKIELCRFS----KDGTKPFLFCTVQRGDKALLAVYDIS-TWNK-----IGHKRLLR-KPASVLSISLDGKYLAM 261 (392)
Q Consensus 193 ~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~~d~~i~v~d~~-~~~~-----~~~~~~~~-~~v~~~~~s~~~~~l~~ 261 (392)
. .. .....++++ |+++.+ .++...++.|.+||.+ .++. ...+..+. .....++++++|+++++
T Consensus 169 ~-~~-~~~~~i~~~~~~d~dg~~l----~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~ 242 (314)
T 1pjx_A 169 T-AF-QFPNGIAVRHMNDGRPYQL----IVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA 242 (314)
T ss_dssp E-EE-SSEEEEEEEECTTSCEEEE----EEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE
T ss_pred c-CC-CCcceEEEecccCCCCCEE----EEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEE
Confidence 2 21 246789999 998652 3455667899999976 3331 22222222 45788999999998888
Q ss_pred EeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeE-EEEeCCCeEEEEEeecC
Q 016257 262 GSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVV-LTASKEWGAMITKLTVP 320 (392)
Q Consensus 262 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~ 320 (392)
...++.|.+||.++++....+ ..+ ...+.+++|+++|+.| ++...++.|..+++...
T Consensus 243 ~~~~~~i~~~d~~~g~~~~~~-~~~-~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGGQPKMRI-RCP-FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EETTTEEEEECTTCBSCSEEE-ECS-SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EcCCCEEEEEcCCCCcEeEEE-eCC-CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 777889999999877665544 234 5689999999999955 45556688999888643
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=1.8e-13 Score=126.75 Aligned_cols=232 Identities=11% Similarity=0.054 Sum_probs=168.2
Q ss_pred CCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC--CCceeecc
Q 016257 73 PSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP--SLRIILDE 150 (392)
Q Consensus 73 p~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~ 150 (392)
|.+..+++...++.|.++|..+++....+.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+.++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~--------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT--------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC--------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC--------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 4444666777889999999988876555432 2356799999999999999999999999995 77766655
Q ss_pred cCCCCcEEEEEec----CCCCeEEEEcC-CCcEEEEECCCCeeeEEEecCC----------CcceEEEEecCCCCcceEE
Q 016257 151 PKAHKSVLDMDFS----LDSEFLATTST-DGSARIWKTEDGVAWTFLTRNS----------DEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 151 ~~~~~~i~~i~~~----~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~ 215 (392)
... .....++|+ |||+++++++. ++++.++|..+.+.+..+.... ...+..+..++++...
T Consensus 237 ~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~--- 312 (567)
T 1qks_A 237 KIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEF--- 312 (567)
T ss_dssp ECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEE---
T ss_pred ecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEE---
Confidence 443 346789999 69998887764 5899999999999888775321 2257788888887642
Q ss_pred EEEEeCCccEEEEEeCCCceeeeeec-ccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeec----cccCc
Q 016257 216 CTVQRGDKALLAVYDISTWNKIGHKR-LLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKR----LHLGT 289 (392)
Q Consensus 216 ~~~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~----~~~~~ 289 (392)
++.....+.|.++|....+...... ........+.|+|+|+++++++ .+++|.++|++++++...+.. .|...
T Consensus 313 -vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~ 391 (567)
T 1qks_A 313 -IVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGR 391 (567)
T ss_dssp -EEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTT
T ss_pred -EEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcc
Confidence 4556788999999988654322211 2234567889999999987766 568899999999998776644 23112
Q ss_pred ceEEEEEeeCCC-eEEEEe-CCCeEEEEEeec
Q 016257 290 SIALVEFCPTQR-VVLTAS-KEWGAMITKLTV 319 (392)
Q Consensus 290 ~i~~~~~s~~~~-~l~~~~-~dg~i~iw~~~~ 319 (392)
.+. + ++|++. .++++. .++.|.+++...
T Consensus 392 g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 392 GAN-F-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp CEE-E-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred cee-e-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 222 2 578755 444543 468999999875
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=1.3e-13 Score=116.34 Aligned_cols=231 Identities=12% Similarity=0.103 Sum_probs=160.6
Q ss_pred eEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCC-CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccc
Q 016257 20 NLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESE-GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD 98 (392)
Q Consensus 20 ~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~ 98 (392)
.+++.++. ++.|.+|+.+ +....-.+..+. ..+.++.++|+|++++ +.++.|+.||. +++..
T Consensus 6 ~~lv~~~~------~~~v~~~d~~--------tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~ 68 (276)
T 3no2_A 6 HLLVGGSG------WNKIAIINKD--------TKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGREL 68 (276)
T ss_dssp EEEEECTT------CSEEEEEETT--------TTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEE
T ss_pred cEEEeeCC------CCEEEEEECC--------CCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEE
Confidence 35665555 4556666543 223334455554 4789999999999888 34677999998 67655
Q ss_pred eeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC-CCcEEEEeCCCCceeeccc------CCCCcEEEEEecCCCCeEEE
Q 016257 99 INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-DGHLRIMHWPSLRIILDEP------KAHKSVLDMDFSLDSEFLAT 171 (392)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~------~~~~~i~~i~~~~~~~~l~~ 171 (392)
.++... ....+.++.+.++|+.+++.+. ++.+..+|. +++.+.++. .++.....+++.++|+++++
T Consensus 69 W~~~~~------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 69 WNIAAP------AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp EEEECC------TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred EEEcCC------CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 554431 1236788999999999999887 777877775 566554432 22234556678999999999
Q ss_pred EcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC------C
Q 016257 172 TSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR------K 245 (392)
Q Consensus 172 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~------~ 245 (392)
...++.|..||.+ ++.+.++... ..+.++...+++.. ++++..++.|..+|..+++.+-++.... .
T Consensus 142 ~~~~~~v~~~d~~-G~~~w~~~~~--~~~~~~~~~~~g~~-----~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~ 213 (276)
T 3no2_A 142 LFATSEVREIAPN-GQLLNSVKLS--GTPFSSAFLDNGDC-----LVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLF 213 (276)
T ss_dssp ETTTTEEEEECTT-SCEEEEEECS--SCCCEEEECTTSCE-----EEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCS
T ss_pred ecCCCEEEEECCC-CCEEEEEECC--CCccceeEcCCCCE-----EEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcccc
Confidence 9999999999997 9888888754 24667888899885 5667777899999999998876665322 2
Q ss_pred CcEEEEECCCCCEEEEEeCC--------CcEEEEec-CCceeeeee
Q 016257 246 PASVLSISLDGKYLAMGSKD--------GDICVVDV-KKMEINHWS 282 (392)
Q Consensus 246 ~v~~~~~s~~~~~l~~~~~d--------g~i~iwd~-~~~~~~~~~ 282 (392)
.+..++..++|.++++.... +..+++++ .+++.+-.+
T Consensus 214 ~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~ 259 (276)
T 3no2_A 214 FVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQL 259 (276)
T ss_dssp EEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEE
T ss_pred ccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEe
Confidence 26788888999888876421 23355555 355554443
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.66 E-value=1e-12 Score=112.45 Aligned_cols=241 Identities=9% Similarity=0.029 Sum_probs=169.3
Q ss_pred eCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEE
Q 016257 60 DESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (392)
Q Consensus 60 ~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 139 (392)
......+.++.+.++|+..++...++.|.+|+.. ++.. ..... .....+..+++.+++++.++...++.|..+
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~-----~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~ 88 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVP-----TPDAKVMCLIVSSLGDIWFTENGANKIGKL 88 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECS-----STTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECC-----CCCCcceeEEECCCCCEEEEecCCCeEEEE
Confidence 3345688999999999877776678889999876 3322 11111 123578999999999877776667889999
Q ss_pred eCCCCceee-cccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEE
Q 016257 140 HWPSLRIIL-DEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 140 d~~~~~~~~-~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
|.. ++... ........+.+++++++++++++...++.|..+|.. ++............+..+++.+++.. .+
T Consensus 89 d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l-----~v 161 (300)
T 2qc5_A 89 SKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL-----WF 161 (300)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE-----EE
T ss_pred CCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE-----EE
Confidence 987 55432 222233578999999999888877778899999987 55442222222346889999999883 35
Q ss_pred EeCCccEEEEEeCCCceeeee-ecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEe
Q 016257 219 QRGDKALLAVYDISTWNKIGH-KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFC 297 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 297 (392)
+...++.|..+|. +++.... .......+..++++++|++.++....+.|.+||. +++........+ ...+.+++++
T Consensus 162 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d 238 (300)
T 2qc5_A 162 TENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTP-NARPHAITAG 238 (300)
T ss_dssp EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEEC
T ss_pred EecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCC-CCCceEEEEC
Confidence 5556788999998 4444321 1223456889999999987777666778999998 555443322233 5678999999
Q ss_pred eCCCeEEEEeCCCeEEEEEe
Q 016257 298 PTQRVVLTASKEWGAMITKL 317 (392)
Q Consensus 298 ~~~~~l~~~~~dg~i~iw~~ 317 (392)
++|+++++...++.|..++.
T Consensus 239 ~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 239 KNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp STTCEEEEETTTTEEEEECT
T ss_pred CCCCEEEeccCCCeEEEECC
Confidence 99987777666789998886
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.65 E-value=3.3e-13 Score=120.64 Aligned_cols=239 Identities=7% Similarity=-0.070 Sum_probs=164.2
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCC--cEEEEeC
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG--HLRIMHW 141 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~i~d~ 141 (392)
..+..++|+|+++++++...++.|++||..++........ ..... ++|+++++.|+++..++ .|.+++.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--------~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--------FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--------CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--------CCCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 4688999999998777777778999999877654322211 11234 99999999999888766 7888887
Q ss_pred CCCceeecc---cC-CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEE----EecCCCcceE-EEEecCCCCcc
Q 016257 142 PSLRIILDE---PK-AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTF----LTRNSDEKIE-LCRFSKDGTKP 212 (392)
Q Consensus 142 ~~~~~~~~~---~~-~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~----~~~~~~~~v~-~~~~~~~~~~~ 212 (392)
..+...... .. ....+.+++++|++..|+.+..++.|+.||..++..... .......... .++|+|++..+
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 665442222 12 334678899999655666677788999999987653222 1111111113 99999965542
Q ss_pred eEEEEEEeCCccEEEEEeCCCceeeeeeccc---------------CCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCc
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNKIGHKRLL---------------RKPASVLSISLDGKYLAMGS-KDGDICVVDVKKM 276 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~ 276 (392)
.++....+.|+.|+.... ...+... -.....++++|+|+++++-. .++.|+.|++.++
T Consensus 282 ----yv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 282 ----YMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp ----EEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred ----EEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 456677889999998753 2122211 13477899999999777777 7899999998888
Q ss_pred eeeeeeeccc------------cCcceEEEEEeeCCCeEEEEeCCCeEEEEEe
Q 016257 277 EINHWSKRLH------------LGTSIALVEFCPTQRVVLTASKEWGAMITKL 317 (392)
Q Consensus 277 ~~~~~~~~~~------------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 317 (392)
+......... .-.....++++++|.++++-..++.|+.+++
T Consensus 356 ~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 356 YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 7654432100 0135889999999888888888888888765
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.64 E-value=5.9e-14 Score=135.70 Aligned_cols=240 Identities=13% Similarity=0.058 Sum_probs=152.7
Q ss_pred cCCCCeEEEEeCCCe---EEEEEEeCC----ccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC-----CcEEEE
Q 016257 72 NPSGDDFVCSTTNGG---CKLFEVYGG----ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-----GHLRIM 139 (392)
Q Consensus 72 sp~~~~l~~~~~d~~---i~iw~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~ 139 (392)
+|+|++++....++. -.+|..... .....+.........+...+..++|||||++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489998887665443 567776542 22222211111111122367899999999999887643 359999
Q ss_pred eCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCc--------------EEEEECCCCeee--EEEecCC-CcceEE
Q 016257 140 HWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGS--------------ARIWKTEDGVAW--TFLTRNS-DEKIEL 202 (392)
Q Consensus 140 d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~--------------i~vwd~~~~~~~--~~~~~~~-~~~v~~ 202 (392)
|+++++.+.... ....+..++|+|| +.|+.++.++. |++|++.++... ..+.... ...+..
T Consensus 195 dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 999988754311 1112357899999 98888876554 889998776532 2222221 124789
Q ss_pred EEecCCCCcceEEEEEEeC--CccEEEEEeCCCc--eeeeeecccCCCcEEEEECCCCCEEEEEeCC----CcEEEEecC
Q 016257 203 CRFSKDGTKPFLFCTVQRG--DKALLAVYDISTW--NKIGHKRLLRKPASVLSISLDGKYLAMGSKD----GDICVVDVK 274 (392)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~--~d~~i~v~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~ 274 (392)
+.|+|||+++++ ..... ....|.+||+.++ +....+..+....... ++|+|+.|+..+.+ +.|.+||+.
T Consensus 273 ~~~SpDG~~l~~--~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 273 ASVSSDGRWVVI--TSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEECTTSCEEEE--EEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEECCCCCEEEE--EEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 999999997321 11111 2458999999876 3133444444444444 34899988887754 459999998
Q ss_pred Cc--eeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 275 KM--EINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 275 ~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
++ +....+ ..+ ...+..++|+ ++.++++...|+..+||.++.
T Consensus 350 ~~~~~~~~l~-~~~-~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 350 GSTPRFDTVV-PES-KDNLESVGIA-GNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp SSSCEEEEEE-CCC-SSEEEEEEEE-BTEEEEEEEETTEEEEEEEET
T ss_pred CCccccEEEe-cCC-CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 75 333333 344 5567788887 667888899999999998773
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.64 E-value=6.8e-13 Score=113.64 Aligned_cols=231 Identities=9% Similarity=0.023 Sum_probs=154.5
Q ss_pred eeCCCCCeeEEEEcCCCC-eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEE
Q 016257 59 FDESEGDPMTIAVNPSGD-DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 137 (392)
+..+..-..+..|+|++. ++++...++.|+.||..+++.. .. .....+.+++++++|+++++ . ++.|.
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~--------~~~~~~~~i~~~~dG~l~v~-~-~~~l~ 76 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV--------TMDAPVSSVALRQSGGYVAT-I-GTKFC 76 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE--------ECSSCEEEEEEBTTSSEEEE-E-TTEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE--------eCCCceEEEEECCCCCEEEE-E-CCeEE
Confidence 334445667899999655 4555566789999998766531 11 12357899999999995554 4 56799
Q ss_pred EEeCCCCceeecccC----CCCcEEEEEecCCCCeEEEEcCC---------CcEEEEECCC-CeeeEEEecCCCcceEEE
Q 016257 138 IMHWPSLRIILDEPK----AHKSVLDMDFSLDSEFLATTSTD---------GSARIWKTED-GVAWTFLTRNSDEKIELC 203 (392)
Q Consensus 138 i~d~~~~~~~~~~~~----~~~~i~~i~~~~~~~~l~~~~~d---------~~i~vwd~~~-~~~~~~~~~~~~~~v~~~ 203 (392)
+||.++++....... ....+.+++++|+|+++++...+ ..-.+|.+.. ++... +.... .....+
T Consensus 77 ~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~-~~pngi 154 (297)
T 3g4e_A 77 ALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQV-DISNGL 154 (297)
T ss_dssp EEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEE-SBEEEE
T ss_pred EEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Eeecc-ccccce
Confidence 999987764322111 12358899999999976654321 2335555543 33322 22222 246889
Q ss_pred EecCCCCcceEEEEEEeCCccEEEEEeC--CCcee-----eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCc
Q 016257 204 RFSKDGTKPFLFCTVQRGDKALLAVYDI--STWNK-----IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKM 276 (392)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~i~v~d~--~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~ 276 (392)
+|+|+++.+ .++.+.++.|.+||+ .++.. ...+.........++++++|++.++...++.|..||.+++
T Consensus 155 ~~spdg~~l----yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 155 DWSLDHKIF----YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EECTTSCEE----EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred EEcCCCCEE----EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 999999863 355666789999987 34432 1222223356788999999988887777888999999988
Q ss_pred eeeeeeeccccCcceEEEEEe-eCCCeEEEEeC
Q 016257 277 EINHWSKRLHLGTSIALVEFC-PTQRVVLTASK 308 (392)
Q Consensus 277 ~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~ 308 (392)
+.+..+. .+ ...+++++|. |+++.|+.++.
T Consensus 231 ~~~~~i~-~p-~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 KRLQTVK-LP-VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEE-CS-SSBEEEEEEESGGGCEEEEEEB
T ss_pred eEEEEEE-CC-CCCceEEEEeCCCCCEEEEEcC
Confidence 8877663 33 5679999998 88886665553
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.64 E-value=7.2e-14 Score=123.88 Aligned_cols=244 Identities=9% Similarity=-0.019 Sum_probs=163.3
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC--CCc
Q 016257 68 TIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV--DGH 135 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~ 135 (392)
.+.++||+++|+++. .++.|.++|..+.+....+................+.|+|||++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999888876 36789999999887665553220111111234567899999999999874 578
Q ss_pred EEEEeCCCCceeecccCCCCcEEEEEecCCC-CeEEEEcCCCcEEEEECCCCeeeEE----EecCCCcceEEEEecCCCC
Q 016257 136 LRIMHWPSLRIILDEPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTEDGVAWTF----LTRNSDEKIELCRFSKDGT 210 (392)
Q Consensus 136 i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~----~~~~~~~~v~~~~~~~~~~ 210 (392)
|.+.|+.+++.+..+.-... ....|++ +.+++.+.||++.+.+..+++.... +..........+.+.+++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 99999999988766543221 2233433 4556666778887777755554422 1111111112356788887
Q ss_pred cceEEEEEEeCCccEEEEEeCCCceee--eeecc----------cCCCcEEEEECCCCCEEEEEeC----------CCcE
Q 016257 211 KPFLFCTVQRGDKALLAVYDISTWNKI--GHKRL----------LRKPASVLSISLDGKYLAMGSK----------DGDI 268 (392)
Q Consensus 211 ~~~~~~~~~~~~d~~i~v~d~~~~~~~--~~~~~----------~~~~v~~~~~s~~~~~l~~~~~----------dg~i 268 (392)
. ++.....+.+.+.|+...... ..+.. .......++++|+++.+++... ++.|
T Consensus 278 ~-----~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~V 352 (426)
T 3c75_H 278 R-----LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFV 352 (426)
T ss_dssp E-----EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEE
T ss_pred E-----EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEE
Confidence 6 334445789999998654321 11110 0112223689999988777643 3579
Q ss_pred EEEecCCceeeeeeeccccCcceEEEEEeeCCC-eEEEEe-CCCeEEEEEeecCccc
Q 016257 269 CVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR-VVLTAS-KEWGAMITKLTVPADW 323 (392)
Q Consensus 269 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~iw~~~~~~~~ 323 (392)
.++|..+.+.+..+.. ......++|+|||+ ++++.. .++.|.++|+...+..
T Consensus 353 sVID~~T~kvv~~I~v---g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 353 VVLNAETGERINKIEL---GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp EEEETTTCCEEEEEEE---EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEEECCCCeEEEEEEC---CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 9999999999988754 34689999999999 888888 5899999999866543
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.60 E-value=1.2e-13 Score=132.29 Aligned_cols=242 Identities=9% Similarity=-0.007 Sum_probs=158.5
Q ss_pred CCCCCeeEEEEcCCCCeEEEEe-----CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCc
Q 016257 61 ESEGDPMTIAVNPSGDDFVCST-----TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (392)
Q Consensus 61 ~h~~~v~~~~~sp~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (392)
+|...+..++|||||++||.+. ....|++||+.+++........ .....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--------~k~~~~~Ws-Dg~~l~y~~~~~~ 196 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--------VKFSGISWL-GNEGFFYSSYDKP 196 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--------EESCCCEEE-TTTEEEEEESSCC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--------ceeccEEEe-CCCEEEEEEecCc
Confidence 3556788999999999988543 2357999999988743321110 012467899 9999998887743
Q ss_pred -------------EEEEeCCCCce----eecccC-CCCcEEEEEecCCCCeEEEEcC----CCcEEEEECCCCe-eeEEE
Q 016257 136 -------------LRIMHWPSLRI----ILDEPK-AHKSVLDMDFSLDSEFLATTST----DGSARIWKTEDGV-AWTFL 192 (392)
Q Consensus 136 -------------i~i~d~~~~~~----~~~~~~-~~~~i~~i~~~~~~~~l~~~~~----d~~i~vwd~~~~~-~~~~~ 192 (392)
|++|++.+... +..... +.....++.|+|||++|+.... +..|+++|+.++. ....+
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l 276 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV 276 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE
Confidence 99999877642 222222 2335778999999998765432 2479999997763 34455
Q ss_pred ecCCCcceEEEEecCCCCcceEEEEEEeC--CccEEEEEeCCCcee--eeeecccCCCcEEEEECCCCCEEEEEeCCC--
Q 016257 193 TRNSDEKIELCRFSKDGTKPFLFCTVQRG--DKALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKDG-- 266 (392)
Q Consensus 193 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-- 266 (392)
..+.. ..... +++++..++ +.+.. ..+.|..+|+.++.. ...+..+...+. .|++++++|+....++
T Consensus 277 ~~~~~-~~~~~-~~~~g~~l~---~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 277 QGDLD-ADVSL-VDNKGSTLY---LLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp ECSSS-SCEEE-EEEETTEEE---EEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE
T ss_pred eCCCC-ceEEE-EeccCCEEE---EEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe
Confidence 44433 33343 677777632 22222 247899999987654 234444554554 8999998887766543
Q ss_pred -cEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCC----CeEEEEEeecC
Q 016257 267 -DICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKE----WGAMITKLTVP 320 (392)
Q Consensus 267 -~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~ 320 (392)
.|++||+.++.... +.... .+.+..+.++++++.|+....+ +.+..|++...
T Consensus 350 ~~l~~~d~~g~~~~~-l~~p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 350 ARVEQFDYEGKRVRE-VALPG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEEEEECTTSCEEEE-ECCSS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred eEEEEEECCCCeeEE-eecCC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 68999988655433 32223 4567888888888866655444 78888887644
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.59 E-value=4.8e-12 Score=111.52 Aligned_cols=274 Identities=8% Similarity=-0.052 Sum_probs=173.7
Q ss_pred EcCCCCeEEEEeC--CC---eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe----------CCCc
Q 016257 71 VNPSGDDFVCSTT--NG---GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG----------VDGH 135 (392)
Q Consensus 71 ~sp~~~~l~~~~~--d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~ 135 (392)
..|+++++++... .. .|.++|..+++....+.. ...+ .++++|||++++++. .++.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~-------g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~ 98 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG-------GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDY 98 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC-------CCCC--CeEECCCCCEEEEEeccccccccCCCCCe
Confidence 3467777776653 22 789999988775433322 1122 899999999999886 3678
Q ss_pred EEEEeCCCCceeecccCC-------CCcEEEEEecCCCCeEEEEcC--CCcEEEEECCCCeeeEE-EecCCCcceEEEEe
Q 016257 136 LRIMHWPSLRIILDEPKA-------HKSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTF-LTRNSDEKIELCRF 205 (392)
Q Consensus 136 i~i~d~~~~~~~~~~~~~-------~~~i~~i~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~v~~~~~ 205 (392)
|.+||..+.+.+..+.-. ......+.|+|||++|++++. ++.|.++| .+++.+.. +... .++.+
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-----~~~~~ 172 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-----TCYHI 172 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-----ceEEE
Confidence 999999988776544322 123458899999999998874 47899999 99988777 5432 12556
Q ss_pred cCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeec-----ccCCCc-EEEEECCCCCEEEEEeCCCcEEEEecCCcee-
Q 016257 206 SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR-----LLRKPA-SVLSISLDGKYLAMGSKDGDICVVDVKKMEI- 278 (392)
Q Consensus 206 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~-----~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~- 278 (392)
.|++... +++.+.|+.+.++|. +++...... ....++ ....+.+++..++..+..+.+.+.|+.+...
T Consensus 173 ~~~~~~~----~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~ 247 (373)
T 2mad_H 173 HPGAPST----FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT 247 (373)
T ss_pred EeCCCce----EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce
Confidence 6777653 345667899999999 776653221 111221 2345666665555555778999999976532
Q ss_pred -eeeeec--------cccCcceEEEEEeeCCCeEEEEeC----------CCeEEEEEeecCccccceeeeeeeeeeeee-
Q 016257 279 -NHWSKR--------LHLGTSIALVEFCPTQRVVLTASK----------EWGAMITKLTVPADWKEWQIYSLLLALFLA- 338 (392)
Q Consensus 279 -~~~~~~--------~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~- 338 (392)
...+.. .........++++|+++.++.+.. ++.|.+.|+...+....+.+...+.+....
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~ 327 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQ 327 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECC
Confidence 221110 000223445789999987777653 357888888766544333322223333222
Q ss_pred -ce-EEEEee-ecceeeeecccccccccC
Q 016257 339 -SA-VVFYIF-FENSDSFWNFPVARNQHG 364 (392)
Q Consensus 339 -~~-~~~~~~-~d~~i~~W~~~~~~~~~~ 364 (392)
.. .++++. .++.|.++|+.+++.+..
T Consensus 328 Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 328 DGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 23 344444 489999999998886644
No 209
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.58 E-value=3.4e-12 Score=111.83 Aligned_cols=289 Identities=10% Similarity=0.065 Sum_probs=172.1
Q ss_pred cceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEE-----------c--CCCCeEEE-Ee
Q 016257 17 ENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAV-----------N--PSGDDFVC-ST 82 (392)
Q Consensus 17 ~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-----------s--p~~~~l~~-~~ 82 (392)
+.+..+.+............+.+.+++++...+.+ -.....+..-.+....+.| + +++++|+. +.
T Consensus 25 e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~-vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l 103 (462)
T 2ece_A 25 EDLAYVACLYTGTGINRADFIAVVDVNPKSETYSK-IVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGL 103 (462)
T ss_dssp CSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTS-EEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBT
T ss_pred ceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcce-EEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccC
Confidence 33444544443222234666777777765443321 1111122221123333334 6 77887665 55
Q ss_pred CCCeEEEEEEeCCcc----ceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC------CcEEEEeCCCCceeecccC
Q 016257 83 TNGGCKLFEVYGGAT----DINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD------GHLRIMHWPSLRIILDEPK 152 (392)
Q Consensus 83 ~d~~i~iw~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~ 152 (392)
.+++|+|+|+.+... ...+...+...-........+..+|+| .++++..+ +.|.++|.++.+.+.+...
T Consensus 104 ~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~ 182 (462)
T 2ece_A 104 RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEI 182 (462)
T ss_dssp TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCS
T ss_pred CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEcc
Confidence 778899999975522 111100000000011234667888999 66665544 7899999999998877753
Q ss_pred CCC---cEEEEEecCCCCeEEEEc-------------------CCCcEEEEECCCCeeeEEEecC-CCcceEEEEe--cC
Q 016257 153 AHK---SVLDMDFSLDSEFLATTS-------------------TDGSARIWKTEDGVAWTFLTRN-SDEKIELCRF--SK 207 (392)
Q Consensus 153 ~~~---~i~~i~~~~~~~~l~~~~-------------------~d~~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~--~~ 207 (392)
... --+.+-|+|+++.++++. .+.+|.+||+.+++.+.++... .......+.| +|
T Consensus 183 ~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P 262 (462)
T 2ece_A 183 DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP 262 (462)
T ss_dssp BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSST
T ss_pred CCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECC
Confidence 322 245688899999888884 3688999999999888888764 2223455655 99
Q ss_pred CCCcceEEEEEE-eCCccEEEEEeCCCcee--eeee--cc----------------cCCCcEEEEECCCCCEEEEEeC-C
Q 016257 208 DGTKPFLFCTVQ-RGDKALLAVYDISTWNK--IGHK--RL----------------LRKPASVLSISLDGKYLAMGSK-D 265 (392)
Q Consensus 208 ~~~~~~~~~~~~-~~~d~~i~v~d~~~~~~--~~~~--~~----------------~~~~v~~~~~s~~~~~l~~~~~-d 265 (392)
++++.|+.+-++ ...+++|.+|....++. .+.+ .. .......+.+||||++|+++.. .
T Consensus 263 dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 263 TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI 342 (462)
T ss_dssp TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT
T ss_pred CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC
Confidence 999744221100 01456777665443221 1110 00 0245678999999999998875 5
Q ss_pred CcEEEEecCC---ceeeeeeeccc------------cCcceEEEEEeeCCCeEEEEe
Q 016257 266 GDICVVDVKK---MEINHWSKRLH------------LGTSIALVEFCPTQRVVLTAS 307 (392)
Q Consensus 266 g~i~iwd~~~---~~~~~~~~~~~------------~~~~i~~~~~s~~~~~l~~~~ 307 (392)
+.|.+||+.. .+++..+..+- ..+....+.++|||++|+++.
T Consensus 343 d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 343 GEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 7899999863 34444443320 001368899999999999888
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.56 E-value=1.3e-11 Score=107.00 Aligned_cols=224 Identities=13% Similarity=0.009 Sum_probs=147.3
Q ss_pred CCeeEEEEcCCCC-eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 016257 64 GDPMTIAVNPSGD-DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (392)
Q Consensus 64 ~~v~~~~~sp~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 142 (392)
.-..++.|+|++. .+++...++.|..|+..+++.. ... ....+.+++|+++|+++++. .+ .|.+||.+
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~--------~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~ 117 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA--------LPFMGSALAKISDSKQLIAS-DD-GLFLRDTA 117 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE--------CSSCEEEEEEEETTEEEEEE-TT-EEEEEETT
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE--------CCCcceEEEEeCCCeEEEEE-CC-CEEEEECC
Confidence 3457889999755 4555556788999998765432 111 12478999999999876654 44 49999998
Q ss_pred CCceeecccC---C-CCcEEEEEecCCCCeEEEEcC------CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcc
Q 016257 143 SLRIILDEPK---A-HKSVLDMDFSLDSEFLATTST------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 143 ~~~~~~~~~~---~-~~~i~~i~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
+++....... . ...+.++.++|+|+++++... .+.|..++ +++... +... ......++|+|+++.+
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~-~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFAD-ISIPNSICFSPDGTTG 193 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEE-ESSEEEEEECTTSCEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCC-CcccCCeEEcCCCCEE
Confidence 8775322111 1 236889999999987665432 24455555 444332 2222 1246789999999863
Q ss_pred eEEEEEEeCCccEEEEEeCC--Cc-ee-----eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec
Q 016257 213 FLFCTVQRGDKALLAVYDIS--TW-NK-----IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR 284 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~--~~-~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 284 (392)
.++...++.|.+||+. ++ +. ...+.........++++++|.+.++...++.|.+||. +++....+.
T Consensus 194 ----yv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~- 267 (326)
T 2ghs_A 194 ----YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE- 267 (326)
T ss_dssp ----EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE-
T ss_pred ----EEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE-
Confidence 2455667899999986 54 21 1122222345678999999988777766788999998 566555442
Q ss_pred cccCcceEEEEEe-eCCCeEEEEeCC
Q 016257 285 LHLGTSIALVEFC-PTQRVVLTASKE 309 (392)
Q Consensus 285 ~~~~~~i~~~~~s-~~~~~l~~~~~d 309 (392)
.+ ...+++++|+ ++++.|+.++..
T Consensus 268 ~~-~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 268 VP-GKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CS-CSBEEEEEEESTTSCEEEEEEBC
T ss_pred CC-CCCcEEEEEecCCCCEEEEEecC
Confidence 33 5579999998 888766555433
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.55 E-value=1.6e-13 Score=120.04 Aligned_cols=175 Identities=15% Similarity=0.067 Sum_probs=131.4
Q ss_pred CCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc----------eeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEE
Q 016257 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR----------IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWK 182 (392)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~----------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd 182 (392)
.+++.+++++...++++|+.++ +.+|++++.+ .......... |+.++| |+++|+++ .++.|++||
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 3689999999999999999875 6669865332 0101122344 999999 89999998 789999999
Q ss_pred CCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEE
Q 016257 183 TEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMG 262 (392)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 262 (392)
+++.........+ ...+..+.+.+.. ++.+..||.|.+||+..+.... +...|++++|||+| ++.|
T Consensus 113 v~sl~~~~~~~~~-~~~v~~i~~~~p~-------~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 113 LEELSEFRTVTSF-EKPVFQLKNVNNT-------LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp SSSTTCEEEEEEC-SSCEEEEEECSSE-------EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEE
T ss_pred chhhhccCcccee-ecceeeEEecCCC-------EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEE
Confidence 9876655444443 3457777766542 4667889999999999776543 34589999999999 6789
Q ss_pred eCCCcEEEEecCCcee--eeeee-----c---cccCcceEEEEEeeCCCeEEEEe
Q 016257 263 SKDGDICVVDVKKMEI--NHWSK-----R---LHLGTSIALVEFCPTQRVVLTAS 307 (392)
Q Consensus 263 ~~dg~i~iwd~~~~~~--~~~~~-----~---~~~~~~i~~~~~s~~~~~l~~~~ 307 (392)
..||++++|+...++. ...+. . +| ...|.++.|.+++.++++-+
T Consensus 179 ~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVE-EYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTT-TSEEEEEEESSSSEEEEEEE
T ss_pred EcCCcEEEEcCCCccccccceecCCcccccccCC-CeeEEEEEEecCCeEEEEEc
Confidence 9999999999888775 33331 1 35 67899999999999887643
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=1.5e-13 Score=120.12 Aligned_cols=177 Identities=10% Similarity=0.010 Sum_probs=132.6
Q ss_pred CeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCcccee-----eccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEE
Q 016257 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDIN-----LLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 139 (392)
+++.+++++...++++|+.++ +.+|+++..+.... +.. .....+.. |+.++| |+++|+++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~--~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTF--KWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCC--SEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccc--eEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 689999999999999999987 77799765431000 100 00112445 999999 89999998 78999999
Q ss_pred eCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEE
Q 016257 140 HWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (392)
Q Consensus 140 d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (392)
|+.+.........+...+.++.+.+.. +++++.||.+.+||+.++.... + ...|++++|+|+|. +.
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-~----~~~Vs~v~WSpkG~-------~v 177 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-L----AQNVTSFDVTNSQL-------AV 177 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-E----EESEEEEEECSSEE-------EE
T ss_pred EchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-c----cCCceEEEEcCCce-------EE
Confidence 998766554455555678888776543 8888999999999999776643 2 23699999999992 55
Q ss_pred eCCccEEEEEeCCCcee--eeee------c---ccCCCcEEEEECCCCCEEEEE
Q 016257 220 RGDKALLAVYDISTWNK--IGHK------R---LLRKPASVLSISLDGKYLAMG 262 (392)
Q Consensus 220 ~~~d~~i~v~d~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~l~~~ 262 (392)
+..||.+++|+....+. ...+ . .+...|.++.|.+++.++++-
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 77789999998887664 3334 2 356889999999999988873
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.54 E-value=4.1e-12 Score=109.59 Aligned_cols=203 Identities=10% Similarity=0.088 Sum_probs=133.8
Q ss_pred CCCCeeEEEEcCC-CCeEEEEeCCCeEEEEEEeCCccceee-ccccCCCCCCCCCeEEEEecCCCCEEEEEeCC------
Q 016257 62 SEGDPMTIAVNPS-GDDFVCSTTNGGCKLFEVYGGATDINL-LAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD------ 133 (392)
Q Consensus 62 h~~~v~~~~~sp~-~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------ 133 (392)
+...+.+++++++ ++++++. ..+.|.+||.. ++.. .+ .. .. .......+.++++.++|+++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~-~~~~~-~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFE-EIAKK-DS-EGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEE-ECCSB-CT-TSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEE-EEEec-cC-CCccccCCcCEEECCCCCEEEEecCccccccc
Confidence 4567999999999 6655544 44468889876 4422 11 11 00 00122457899999999877776554
Q ss_pred ---------CcEEEEeCCCCceeecccCCCCcEEEEEec----CCCCeEEEE-cCCCcEEEEECC-CCee-----eEEEe
Q 016257 134 ---------GHLRIMHWPSLRIILDEPKAHKSVLDMDFS----LDSEFLATT-STDGSARIWKTE-DGVA-----WTFLT 193 (392)
Q Consensus 134 ---------g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~----~~~~~l~~~-~~d~~i~vwd~~-~~~~-----~~~~~ 193 (392)
+.|..++.. ++.. ...........++|+ |+++.++.+ ..++.|.+||.+ +++. ...+.
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~ 221 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP 221 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC
T ss_pred ccccccCCCCeEEEECCC-CCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC
Confidence 567777765 4432 222233456889999 999765544 567899999986 4432 11222
Q ss_pred cCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEe
Q 016257 194 RNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVD 272 (392)
Q Consensus 194 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd 272 (392)
.+....+..+++++++.. .++...++.|.+||.++++.+..+..+...+.+++++|+++.|++++ .++.|..|+
T Consensus 222 ~~~~~~p~~i~~d~~G~l-----~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 222 GTHEGGADGMDFDEDNNL-----LVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CCSSCEEEEEEEBTTCCE-----EEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCCCCCceEECCCCCE-----EEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 111035788999999974 34444678899999987776666665557889999999999665554 567899999
Q ss_pred cCCc
Q 016257 273 VKKM 276 (392)
Q Consensus 273 ~~~~ 276 (392)
+...
T Consensus 297 ~~~~ 300 (314)
T 1pjx_A 297 WQRN 300 (314)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8753
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=3e-12 Score=111.54 Aligned_cols=279 Identities=8% Similarity=-0.046 Sum_probs=177.8
Q ss_pred EEEcCCCCeEEEEeC-----CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe----------CC
Q 016257 69 IAVNPSGDDFVCSTT-----NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG----------VD 133 (392)
Q Consensus 69 ~~~sp~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~d 133 (392)
....|+++.+++... ++.|.++|..+.+....+... ..+ . ++++|||++++++. .+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-------~~P-~-va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-------FLP-N-PVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-------SSC-E-EEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-------CCC-c-EEECCCCCEEEEEcccccccccCCCC
Confidence 445789998888765 578999999888866555432 223 4 99999999988775 36
Q ss_pred CcEEEEeCCCCceeecccCCC-------CcEEEEEecCCCCeEEEEcC--CCcEEEEECCCCeeeEEEecCCCcceEEEE
Q 016257 134 GHLRIMHWPSLRIILDEPKAH-------KSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTFLTRNSDEKIELCR 204 (392)
Q Consensus 134 g~i~i~d~~~~~~~~~~~~~~-------~~i~~i~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 204 (392)
+.|.+||..+.+.+..+.-.. .....+.++|||++++++.. ++.|.++|+.+++.+.++.... . ..
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g---~--~~ 183 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD---C--YH 183 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---E--EE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC---c--ce
Confidence 789999999998776553221 24567899999999888864 6889999999999998886432 1 12
Q ss_pred ecCCCCcceEEEEEEeCCccEEEEEeCCC-ceeeeee----cccCCCcE-EEEEC-CCCCEEEEEeCCCcEEEEecCCce
Q 016257 205 FSKDGTKPFLFCTVQRGDKALLAVYDIST-WNKIGHK----RLLRKPAS-VLSIS-LDGKYLAMGSKDGDICVVDVKKME 277 (392)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~~i~v~d~~~-~~~~~~~----~~~~~~v~-~~~~s-~~~~~l~~~~~dg~i~iwd~~~~~ 277 (392)
..|.+... +++.+.||.+.+.++.. ++..... .....++. ...|. ++|++++ .+.+|.|++.|+.+..
T Consensus 184 ~~P~g~~~----~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 184 IFPTAPDT----FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EEEEETTE----EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred eecCCCce----eEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 22443321 34555677777777765 4432111 11112221 23553 6776555 5558999999997654
Q ss_pred --eeeeee--------ccccCcceEEEEEeeCCCeEEEEeC----------CCeEEEEEeecCccccceeeeeeeeeeee
Q 016257 278 --INHWSK--------RLHLGTSIALVEFCPTQRVVLTASK----------EWGAMITKLTVPADWKEWQIYSLLLALFL 337 (392)
Q Consensus 278 --~~~~~~--------~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 337 (392)
....+. .+-.......++++++++.++.... .+.|.+.|+.+.+....+.+...+.++.+
T Consensus 259 ~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lav 338 (386)
T 3sjl_D 259 AKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINV 338 (386)
T ss_dssp CEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEE
T ss_pred ceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEE
Confidence 222221 0100233445778999887777643 24677777777666555555444434433
Q ss_pred --ece-EEEEee-ecceeeeecccccccccCCC
Q 016257 338 --ASA-VVFYIF-FENSDSFWNFPVARNQHGGP 366 (392)
Q Consensus 338 --~~~-~~~~~~-~d~~i~~W~~~~~~~~~~~p 366 (392)
... .++++. .++.|.++|..+++.+...+
T Consensus 339 s~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 339 SQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp CSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 222 334433 48899999999988664433
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.53 E-value=5e-12 Score=108.67 Aligned_cols=229 Identities=10% Similarity=-0.032 Sum_probs=148.5
Q ss_pred eeCCCCCeeEEEEcCCCC-eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEE
Q 016257 59 FDESEGDPMTIAVNPSGD-DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 137 (392)
+...........|+|+++ ++++...++.|..|+. +++ ...+.. +...+..++++++|+++++...++.|.
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~-------~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLD-------ATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEE-------SCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeC-------CCCccceeeECCCCCEEEEECCCCEEE
Confidence 444556788999999998 5566667888999986 333 122211 235689999999998766655567899
Q ss_pred EEeCCCCceeeccc--CC--CCcEEEEEecCCCCeEEE----EcC-------------CCcEEEEECCCCeeeEEEecCC
Q 016257 138 IMHWPSLRIILDEP--KA--HKSVLDMDFSLDSEFLAT----TST-------------DGSARIWKTEDGVAWTFLTRNS 196 (392)
Q Consensus 138 i~d~~~~~~~~~~~--~~--~~~i~~i~~~~~~~~l~~----~~~-------------d~~i~vwd~~~~~~~~~~~~~~ 196 (392)
.|+.+ ++...... .. ...+.+++++|+|+++++ +.. .+.|..+|..+++..... ..
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~ 187 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL 187 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC
Confidence 99975 44321111 11 124678999999998876 332 246777887666544332 22
Q ss_pred CcceEEEEecCCCCcceEEEEEEeCC-----ccEEEEEeCCCceee--eee-cccCCCcEEEEECCCCCEEEEEeCCCcE
Q 016257 197 DEKIELCRFSKDGTKPFLFCTVQRGD-----KALLAVYDISTWNKI--GHK-RLLRKPASVLSISLDGKYLAMGSKDGDI 268 (392)
Q Consensus 197 ~~~v~~~~~~~~~~~~~~~~~~~~~~-----d~~i~v~d~~~~~~~--~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i 268 (392)
.....++|+|+++.++ ++... .+.|.+||+...... ..+ .........++++++|++ .+++.++ |
T Consensus 188 -~~p~gl~~spdg~~ly----v~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l-wv~~~~g-v 260 (305)
T 3dr2_A 188 -DHPNGLAFSPDEQTLY----VSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL-WSSSGTG-V 260 (305)
T ss_dssp -SSEEEEEECTTSSEEE----EEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE-EECCSSE-E
T ss_pred -CCCcceEEcCCCCEEE----EEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE-EEecCCc-E
Confidence 2467899999998632 22222 378999998754311 111 112334557899999994 4444554 9
Q ss_pred EEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCC
Q 016257 269 CVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEW 310 (392)
Q Consensus 269 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 310 (392)
.+|+.. ++....+. .+ ..+.+++|+++++.|..++.++
T Consensus 261 ~~~~~~-g~~~~~~~-~~--~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 261 CVFDSD-GQLLGHIP-TP--GTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEECTT-SCEEEEEE-CS--SCCCEEEECTTSCEEEEEETTE
T ss_pred EEECCC-CCEEEEEE-CC--CceeEEEEeCCCCEEEEEcCCe
Confidence 999984 55555443 22 3588999999998888887763
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=4.3e-12 Score=110.95 Aligned_cols=244 Identities=9% Similarity=-0.005 Sum_probs=154.3
Q ss_pred CCeeEEEEcCCCCeEEEEe--CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC-----CCcE
Q 016257 64 GDPMTIAVNPSGDDFVCST--TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-----DGHL 136 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i 136 (392)
..+..++++|+|+.+++.. .++.++||.+.+++ ...+.........+...+..++++++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6799999999999888864 23436677766433 22111100111134568999999999876665433 5789
Q ss_pred EEEeCCCCceeecccC------CCCcEEEEEecCCCCeE-EEEc---CCCcEEEEECCCCeeeEEEecCC----------
Q 016257 137 RIMHWPSLRIILDEPK------AHKSVLDMDFSLDSEFL-ATTS---TDGSARIWKTEDGVAWTFLTRNS---------- 196 (392)
Q Consensus 137 ~i~d~~~~~~~~~~~~------~~~~i~~i~~~~~~~~l-~~~~---~d~~i~vwd~~~~~~~~~~~~~~---------- 196 (392)
.+||+++++.+..+.. +...+..+++++++..+ ++-. .++.|.+||+.+++..+.+..+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 9999998875543322 11346899999865554 4444 57889999998877655442210
Q ss_pred ------------------CcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC---ce-----eee--eecccCCCcE
Q 016257 197 ------------------DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST---WN-----KIG--HKRLLRKPAS 248 (392)
Q Consensus 197 ------------------~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~---~~-----~~~--~~~~~~~~v~ 248 (392)
...+..++|+|+++.+| ++......+..++... +. ... ....+.....
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLY----LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEE----EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEE----EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 01257899999998632 2233334666665321 00 000 1112233455
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEE
Q 016257 249 VLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAM 313 (392)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 313 (392)
.++++++|.++++...++.|.+||.++++........+ ...+.+++|.++++++++.+..+.+.
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~-~~~p~~va~~~~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEK-LSWTDSFNFGSDGYLYFDCNQLHHSA 315 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGG-GSCEEEEEECTTSCEEEEECCGGGSG
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCc-eecCCeeEECCCCcEEEEeCcccccc
Confidence 78999999999998889999999985666543332222 45689999999998877776554443
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=3e-12 Score=113.51 Aligned_cols=274 Identities=9% Similarity=-0.036 Sum_probs=179.3
Q ss_pred CCCCeEEEEeCC-----CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe----------CCCcEE
Q 016257 73 PSGDDFVCSTTN-----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG----------VDGHLR 137 (392)
Q Consensus 73 p~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~ 137 (392)
|+++.+++.... +.|.++|..+.+....+.... .+ .+.++||+++++++. .++.|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-------~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vs 152 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-------LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVE 152 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-------SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-------CC--ceEECCCCCEEEEEeccccccccCCCCCEEE
Confidence 467777766543 689999999988766655422 24 899999999988876 367899
Q ss_pred EEeCCCCceeecccCC-------CCcEEEEEecCCCCeEEEEcC--CCcEEEEECCCCeeeEEEecCCCcceEEEEecCC
Q 016257 138 IMHWPSLRIILDEPKA-------HKSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKD 208 (392)
Q Consensus 138 i~d~~~~~~~~~~~~~-------~~~i~~i~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 208 (392)
++|..+++.+..+.-. ......+.++|||++++++.. ++.|.+.|+.+++.+.++.... +....|+
T Consensus 153 viD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g-----~~~~~p~ 227 (426)
T 3c75_H 153 VFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD-----CYHIFPA 227 (426)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-----EEEEEEE
T ss_pred EEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-----ceeeccC
Confidence 9999999877655321 123457899999999998864 5789999999999988887432 1234454
Q ss_pred CCcceEEEEEEeCCccEEEEEeCCCceeeee----ecccCCCc-EEEEECCCCCEEEEEeCCCcEEEEecCCceeee--e
Q 016257 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGH----KRLLRKPA-SVLSISLDGKYLAMGSKDGDICVVDVKKMEINH--W 281 (392)
Q Consensus 209 ~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~----~~~~~~~v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~ 281 (392)
+... +++.+.|+.+.+.+..+++.... +.....++ ..+.+++++..++..+..+.+.+.|..+..... .
T Consensus 228 g~~~----~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~ 303 (426)
T 3c75_H 228 SPTV----FYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAP 303 (426)
T ss_dssp ETTE----EEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCC
T ss_pred CCcE----EEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeee
Confidence 4432 23344566666666654443311 11111121 135679999888888888999999997654221 1
Q ss_pred eecc------c--cCcceEEEEEeeCCCeEEEEeC----------CCeEEEEEeecCccccceeeeeeeeeeeee--ce-
Q 016257 282 SKRL------H--LGTSIALVEFCPTQRVVLTASK----------EWGAMITKLTVPADWKEWQIYSLLLALFLA--SA- 340 (392)
Q Consensus 282 ~~~~------~--~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~--~~- 340 (392)
+... . .......++++|+++.+++... ++.|.+.|+...+....+.+...+.+..+. ..
T Consensus 304 ~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~ 383 (426)
T 3c75_H 304 IEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEP 383 (426)
T ss_dssp EESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSC
T ss_pred eeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCE
Confidence 1000 0 0112223789999887766542 357999998877766655554445554443 33
Q ss_pred EEEEee-ecceeeeecccccccccC
Q 016257 341 VVFYIF-FENSDSFWNFPVARNQHG 364 (392)
Q Consensus 341 ~~~~~~-~d~~i~~W~~~~~~~~~~ 364 (392)
.+++.. .++.|.++|+.+++.+..
T Consensus 384 ~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 384 LLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCCeEEEEECCCCCEEEE
Confidence 455555 489999999999886644
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.48 E-value=1.9e-11 Score=104.59 Aligned_cols=228 Identities=11% Similarity=0.043 Sum_probs=141.1
Q ss_pred eecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEE
Q 016257 9 CGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCK 88 (392)
Q Consensus 9 ~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~ 88 (392)
+..|+|+... ++.+... .+. |+.+++.+... ..+ .....+.+++++|+|+++++ . ++.|.
T Consensus 17 gp~w~~~~~~--l~~~d~~------~~~--i~~~d~~~~~~-------~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~ 76 (297)
T 3g4e_A 17 SPVWEEVSNS--LLFVDIP------AKK--VCRWDSFTKQV-------QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFC 76 (297)
T ss_dssp EEEEETTTTE--EEEEETT------TTE--EEEEETTTCCE-------EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEE
T ss_pred CCeEECCCCE--EEEEECC------CCE--EEEEECCCCcE-------EEE-eCCCceEEEEECCCCCEEEE-E-CCeEE
Confidence 5678886654 3333222 223 55555543221 112 23567999999999995554 4 45699
Q ss_pred EEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC---------CcEEEEeCCCCceeecccCCCCcEEE
Q 016257 89 LFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD---------GHLRIMHWPSLRIILDEPKAHKSVLD 159 (392)
Q Consensus 89 iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~i~~ 159 (392)
+||..+++... +.... .......++.++++|+|+++++.... ..-.+|.+..................
T Consensus 77 ~~d~~~g~~~~-~~~~~--~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~png 153 (297)
T 3g4e_A 77 ALNWKEQSAVV-LATVD--NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNG 153 (297)
T ss_dssp EEETTTTEEEE-EEECC--TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEE
T ss_pred EEECCCCcEEE-EEecC--CCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccc
Confidence 99987665322 11110 00122457899999999866654221 23455555432222222233345688
Q ss_pred EEecCCCCeEE-EEcCCCcEEEEEC--CCCeee--EEEec--CCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCC
Q 016257 160 MDFSLDSEFLA-TTSTDGSARIWKT--EDGVAW--TFLTR--NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS 232 (392)
Q Consensus 160 i~~~~~~~~l~-~~~~d~~i~vwd~--~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 232 (392)
++|+|+++.|+ +.+.++.|.+|++ .++... ..+.. ........++++++|.. .++....+.|..||..
T Consensus 154 i~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l-----wva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKL-----WVACYNGGRVIRLDPV 228 (297)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCE-----EEEEETTTEEEEECTT
T ss_pred eEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCE-----EEEEcCCCEEEEEcCC
Confidence 99999998765 4556788999997 444331 12211 11235789999999973 3444556789999999
Q ss_pred CceeeeeecccCCCcEEEEEC-CCCCEEEEEeC
Q 016257 233 TWNKIGHKRLLRKPASVLSIS-LDGKYLAMGSK 264 (392)
Q Consensus 233 ~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~ 264 (392)
+++.+..+......+++++|. |+++.|++++.
T Consensus 229 tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 229 TGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 888887777766789999998 88887776654
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.47 E-value=8.3e-11 Score=105.08 Aligned_cols=238 Identities=10% Similarity=-0.004 Sum_probs=148.9
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCC
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNG 85 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~ 85 (392)
....++|++++ .+.++... .+.|+.|. ..+. ........ ..... ++|+|+++.|+++..++
T Consensus 132 ~P~~la~d~~g---~lyv~d~~------~~~I~~id--~~~g------~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~ 192 (409)
T 3hrp_A 132 YMWGIAAVGNN---TVLAYQRD------DPRVRLIS--VDDN------KVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEG 192 (409)
T ss_dssp CEEEEEECSTT---EEEEEETT------TTEEEEEE--TTTT------EEEEEEET-CCBCB-CEECTTSSEEEEEBSST
T ss_pred CceEEEEeCCC---CEEEEecC------CCcEEEEE--CCCC------EEEEeecc-CCCCc-eeEecCCCcEEEEecCC
Confidence 34578888876 34443332 23344444 3322 22222222 33344 99999999998888765
Q ss_pred --eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeec----ccCCCCc--E
Q 016257 86 --GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD----EPKAHKS--V 157 (392)
Q Consensus 86 --~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~--i 157 (392)
.|.+++.......... .. .. ......+.+++++|++..|+++..++.|+.||..++..... ....... .
T Consensus 193 ~~~I~~~d~~~~~~~~~~-g~-~~-~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 193 THTVYVYMKASGWAPTRI-GQ-LG-STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp TCEEEEEEGGGTTCEEEE-EE-CC-TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSC
T ss_pred CceEEEEEcCCCceeEEe-ee-cc-chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCcc
Confidence 6777776554332221 00 00 01234678899999555666677788999999987764322 2222221 2
Q ss_pred EEEEecCC-CCeEEEEcCCCcEEEEECCCCeeeEEEecCC--------------CcceEEEEecCCCCcceEEEEEEeC-
Q 016257 158 LDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNS--------------DEKIELCRFSKDGTKPFLFCTVQRG- 221 (392)
Q Consensus 158 ~~i~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~~~~~~~~~~- 221 (392)
..++|+|+ +.++++-..++.|+.|+.... ...+.... -.....++++|++.. .++..
T Consensus 270 ~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l-----yvad~~ 342 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF-----YIVDGF 342 (409)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE-----EEEETT
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE-----EEEeCC
Confidence 39999995 555666667788999997543 23332221 124789999999984 46666
Q ss_pred CccEEEEEeCCCceeeeeeccc---------------CCCcEEEEECCCCCEEEEEeCCCcEEEEec
Q 016257 222 DKALLAVYDISTWNKIGHKRLL---------------RKPASVLSISLDGKYLAMGSKDGDICVVDV 273 (392)
Q Consensus 222 ~d~~i~v~d~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 273 (392)
.++.|+.||+.++... .+..+ -.....++++++|.++++-..+++|+.+++
T Consensus 343 ~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 343 KGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 7899999998776543 22222 135788999999888888778888888775
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.46 E-value=2.2e-11 Score=104.66 Aligned_cols=232 Identities=13% Similarity=0.073 Sum_probs=145.2
Q ss_pred eeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCe
Q 016257 7 VTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGG 86 (392)
Q Consensus 7 v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~ 86 (392)
.....|+|++.. ++.++.. .+.| +.+++.+. . ..+..+...+..++++++|+++++...++.
T Consensus 47 ~egp~~~~~g~~--l~~~d~~------~~~i--~~~~~~g~-~-------~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 47 SEGPAWWEAQRT--LVWSDLV------GRRV--LGWREDGT-V-------DVLLDATAFTNGNAVDAQQRLVHCEHGRRA 108 (305)
T ss_dssp EEEEEEEGGGTE--EEEEETT------TTEE--EEEETTSC-E-------EEEEESCSCEEEEEECTTSCEEEEETTTTE
T ss_pred ccCCeEeCCCCE--EEEEECC------CCEE--EEEeCCCC-E-------EEEeCCCCccceeeECCCCCEEEEECCCCE
Confidence 456788888754 4443333 2334 44444321 1 233445677999999999997766556678
Q ss_pred EEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEE----EeC-------------CCcEEEEeCCCCceeec
Q 016257 87 CKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAA----GGV-------------DGHLRIMHWPSLRIILD 149 (392)
Q Consensus 87 i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~ 149 (392)
|.+|+.. ++. ..+.... . ......+..+++.++|++.++ |.. .+.|..+|.++++....
T Consensus 109 v~~~~~~-g~~-~~~~~~~-~-~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 109 ITRSDAD-GQA-HLLVGRY-A-GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp EEEECTT-SCE-EEEECEE-T-TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred EEEECCC-CCE-EEEEecc-C-CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 9998864 332 1111110 0 001235678999999988776 332 24577778766664432
Q ss_pred ccCCCCcEEEEEecCCCCeEEEEcCC------CcEEEEECCCCee--eEEEecCCCcceEEEEecCCCCcceEEEEEEeC
Q 016257 150 EPKAHKSVLDMDFSLDSEFLATTSTD------GSARIWKTEDGVA--WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221 (392)
Q Consensus 150 ~~~~~~~i~~i~~~~~~~~l~~~~~d------~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (392)
. .......++|+||++.|+.+... +.|.+|++..+.. ...+..........++++++|. +..+.
T Consensus 185 ~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~------lwv~~ 256 (305)
T 3dr2_A 185 A--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW------LWSSS 256 (305)
T ss_dssp E--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC------EEECC
T ss_pred e--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC------EEEec
Confidence 2 33457889999999988777654 6899999876541 1122111223456789999998 35555
Q ss_pred CccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEe
Q 016257 222 DKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVD 272 (392)
Q Consensus 222 ~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 272 (392)
.+ .|.+||.. ++.+..+.... .+..++|+|+++.|+.++.++ +..++
T Consensus 257 ~~-gv~~~~~~-g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 257 GT-GVCVFDSD-GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp SS-EEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred CC-cEEEECCC-CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 44 49999985 55655555444 588899999999988888764 44333
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.43 E-value=1.3e-11 Score=107.68 Aligned_cols=235 Identities=8% Similarity=-0.088 Sum_probs=150.4
Q ss_pred EEEEcCCCCeEEEEe----------CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC--CCc
Q 016257 68 TIAVNPSGDDFVCST----------TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV--DGH 135 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~ 135 (392)
.+.++||+++++++. .++.|.+||..+.+...++................++++|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999998886 36789999999988766654321000000123567999999999999875 456
Q ss_pred EEE--EeCCCCceeecccCCCCcEEEEEecCCCC-eEEEEcCCCcEEEEECCC-----CeeeEE----EecCCCcceEEE
Q 016257 136 LRI--MHWPSLRIILDEPKAHKSVLDMDFSLDSE-FLATTSTDGSARIWKTED-----GVAWTF----LTRNSDEKIELC 203 (392)
Q Consensus 136 i~i--~d~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~vwd~~~-----~~~~~~----~~~~~~~~v~~~ 203 (392)
+.+ +|..+ +..+.-. +. ....|+++ .+++.+.|+.+.+.|+.+ ++.... +... ..+.
T Consensus 149 v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg-~~P~--- 217 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCS-SQAA--- 217 (368)
T ss_dssp EEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBC-SCCE---
T ss_pred EEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCC-CCcc---
Confidence 888 88876 2222111 11 12345443 445566788888888876 433211 1111 1122
Q ss_pred EecCCCCcceEEEEEEeCCccEEEEEeCCCce--eeeeecc----------cCCCcEEEEECCCCCEEEEEeC-C-----
Q 016257 204 RFSKDGTKPFLFCTVQRGDKALLAVYDISTWN--KIGHKRL----------LRKPASVLSISLDGKYLAMGSK-D----- 265 (392)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~--~~~~~~~----------~~~~v~~~~~s~~~~~l~~~~~-d----- 265 (392)
. .+++.. ++..+. +.+.+.|..... .+..+.. .......++++|+++.++++.. +
T Consensus 218 ~-~~~~~~-----~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 218 Q-ANYPGM-----LVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp E-ETTTTE-----EEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred c-cccCCE-----EEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccc
Confidence 3 555554 333334 889999986532 2222211 0112223689999998887643 2
Q ss_pred ---CcEEEEecCCceeeeeeeccccCcceEEEEEeeCCC-eEEEEe-CCCeEEEEEeecCccc
Q 016257 266 ---GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR-VVLTAS-KEWGAMITKLTVPADW 323 (392)
Q Consensus 266 ---g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~iw~~~~~~~~ 323 (392)
+.+.++|+.+++.+..+.. ......++|+|||+ .+++.. .++.|.++|+...+..
T Consensus 291 ~~~~~~~ViD~~t~~vv~~i~v---g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSGPISN---GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp SCEEEEEEEESSSCCEEECCEE---EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred ccCCCEEEEECCCCeEEEEEEC---CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 3567999999998887754 34689999999998 456666 5899999999866543
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.41 E-value=5.8e-15 Score=130.33 Aligned_cols=266 Identities=12% Similarity=-0.017 Sum_probs=140.3
Q ss_pred CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCC
Q 016257 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (392)
Q Consensus 74 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 153 (392)
++..+++++.|+.|+.||..+++...++.. +.+.+..+..++..+++++.|+.|+.||.++++.+.....+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 567899999999999999999887665543 12333334467777888789999999999988875544332
Q ss_pred CC-cEE-EEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeC
Q 016257 154 HK-SVL-DMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDI 231 (392)
Q Consensus 154 ~~-~i~-~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~ 231 (392)
.. .+. +..+. ++..+++++.|+.++.||.++++.+..+..+. ...++|++.. ++.++.++.|+.||.
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~-----v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSL-----LYLGRTEYTITMYDT 147 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------------EEEEEEEEEEECCCS
T ss_pred CccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCE-----EEEEecCCEEEEEEC
Confidence 21 111 11111 34567788889999999999998877665432 2345566665 677788899999999
Q ss_pred CCceeeeeecccCCCcEEEEECCCC---CEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEE-EEEeeCCCeE----
Q 016257 232 STWNKIGHKRLLRKPASVLSISLDG---KYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL-VEFCPTQRVV---- 303 (392)
Q Consensus 232 ~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l---- 303 (392)
++++.+-.+.... .....++++. ..+++++.||.|+.||.++++.+-... . ..++.. ..++++|...
T Consensus 148 ~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~--~-~~pv~~~~~~~~dg~~~v~~~ 222 (369)
T 2hz6_A 148 KTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN--Y-ASPVVAFYVWQREGLRKVMHI 222 (369)
T ss_dssp SSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE--C-SSCEEEEEECTTSSCEEECCE
T ss_pred CCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec--C-CCceEEEEEecCCceEeccce
Confidence 9988764443211 1122333332 567778899999999999998765543 2 344433 3444455321
Q ss_pred EEEeCCCeEEEEEeecCc--cccceeeeee--eeeeeeeceEEEEeeecceeeeecccccccccCCC
Q 016257 304 LTASKEWGAMITKLTVPA--DWKEWQIYSL--LLALFLASAVVFYIFFENSDSFWNFPVARNQHGGP 366 (392)
Q Consensus 304 ~~~~~dg~i~iw~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p 366 (392)
+.+ ++.++.++...++ ....|..... ........+.++.+..++.++..+....+..+..|
T Consensus 223 ~~~--~~~l~~ld~~tG~~~~~~~W~~~~~~~~~sp~~~~g~lyv~~~~G~l~al~~~~~~~~~~~~ 287 (369)
T 2hz6_A 223 NVA--VETLRYLTFMSGEVGRITKWKYPFPKETEAKSKLTPTLYVGKYSTSLYASPSMVHEGVAVVP 287 (369)
T ss_dssp EEE--HHHHHHHHHHHHHHHHHHTSCCCCCCHHHHHHHSEEEECBEECSSCEECCEEEECTTCCBC-
T ss_pred eec--ccceeeeehhcCCcccceeeeeccCccccccccccceEEEecccCCEEecCccccCCcccCc
Confidence 111 2334444443322 0012322110 00111244566777788999998887655554444
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.39 E-value=7.5e-11 Score=113.01 Aligned_cols=251 Identities=10% Similarity=0.029 Sum_probs=148.6
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d 84 (392)
..+..++|+||++++++...-++ .....|++++++ +... ....+.+ .....++|+ |++.|+.++.+
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G----~~~~~i~v~dl~--tg~~-----~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAG----SDWREIHLMDVE--SKQP-----LETPLKD--VKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSS----CCEEEEEEEETT--TCSE-----EEEEEEE--EESCCCEEE-TTTEEEEEESS
T ss_pred EEEEEEEECCCCCEEEEEEecCC----CceEEEEEEECC--CCCC-----CccccCC--ceeccEEEe-CCCEEEEEEec
Confidence 35778899999976444332111 112345555544 3222 1112221 113568899 99999988877
Q ss_pred C-------------eEEEEEEeCCccceeeccccCCCCC-CCCCeEEEEecCCCCEEEEEeC----CCcEEEEeCCCCc-
Q 016257 85 G-------------GCKLFEVYGGATDINLLAKKMPPLQ-DAGPQKCLSFSVDGSRFAAGGV----DGHLRIMHWPSLR- 145 (392)
Q Consensus 85 ~-------------~i~iw~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~- 145 (392)
. .|++|++.+........... .. +......+.|+|||++|+.... +..|+++|+.++.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~---~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA---IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESC---SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEec---CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 4 38888887665322222111 01 2334678999999998865432 3589999997763
Q ss_pred eeecccCCCCcEEEEEecCCCCeEEE-EcCC---CcEEEEECCCCee--eEEEecCCCcceEEEEecCCCCcceEEEEEE
Q 016257 146 IILDEPKAHKSVLDMDFSLDSEFLAT-TSTD---GSARIWKTEDGVA--WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (392)
Q Consensus 146 ~~~~~~~~~~~i~~i~~~~~~~~l~~-~~~d---~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (392)
....+..+....... |+++++.|+. ...+ +.|..+|+.++.. ...+..+... +. .|++++..+++ ...
T Consensus 272 ~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~--~~s~~g~~lv~--~~~ 345 (693)
T 3iuj_A 272 PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-VL--TVHSGSGYLFA--EYM 345 (693)
T ss_dssp CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CE--EEEEETTEEEE--EEE
T ss_pred ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-EE--EEEEECCEEEE--EEE
Confidence 233344444444444 6666665554 4333 5799999987654 3445544443 33 88999886321 111
Q ss_pred eCCccEEEEEeCCCceeeeeec-ccCCCcEEEEECCCCCEEEEEeCC----CcEEEEecCCceee
Q 016257 220 RGDKALLAVYDISTWNKIGHKR-LLRKPASVLSISLDGKYLAMGSKD----GDICVVDVKKMEIN 279 (392)
Q Consensus 220 ~~~d~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~~ 279 (392)
......|.+||+..+.. ..+. .....+..+.++++++.++....+ +.++.||+.+++..
T Consensus 346 ~~g~~~l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 346 VDATARVEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp ETTEEEEEEECTTSCEE-EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred ECCeeEEEEEECCCCee-EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 22223799999985543 3333 233456677788888777665544 78999999887643
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.38 E-value=3.2e-11 Score=114.94 Aligned_cols=294 Identities=10% Similarity=0.046 Sum_probs=178.8
Q ss_pred CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCC-C-CC-CCe-EEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecc
Q 016257 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPL-Q-DA-GPQ-KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150 (392)
Q Consensus 75 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-~-~~-~~v-~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 150 (392)
+..|++++.++.|+-+|..+++...+......... . .. ..+ ..+.. ++..+++++.|+.|..+|.++|+.+...
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 55777777888899999988887665532211000 0 00 000 11222 3568888999999999999999987655
Q ss_pred cCC-C-CcEEEEEecC--CCCeEEEEc------CCCcEEEEECCCCeeeEEEecCCC-----------------------
Q 016257 151 PKA-H-KSVLDMDFSL--DSEFLATTS------TDGSARIWKTEDGVAWTFLTRNSD----------------------- 197 (392)
Q Consensus 151 ~~~-~-~~i~~i~~~~--~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~----------------------- 197 (392)
... . .....+..+| .+..+++++ .++.|+.||.++++.+-.+.....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 432 1 1111111222 133444443 368999999999998877652110
Q ss_pred -------cceEEEEecCCCCcceEEEEEEeCCcc-------------------EEEEEeCCCceeeeeeccc--C-----
Q 016257 198 -------EKIELCRFSKDGTKPFLFCTVQRGDKA-------------------LLAVYDISTWNKIGHKRLL--R----- 244 (392)
Q Consensus 198 -------~~v~~~~~~~~~~~~~~~~~~~~~~d~-------------------~i~v~d~~~~~~~~~~~~~--~----- 244 (392)
.....++++|+... ++.+..++ .|..+|.++++.+-.+... .
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~-----vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNL-----LYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT 302 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTE-----EEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC
T ss_pred eecCCCCccccceeEcCCCCE-----EEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc
Confidence 00125778887775 44555554 4999999999987555432 1
Q ss_pred --CCcEEEEECCCCC---EEEEEeCCCcEEEEecCCceeeeeeecccc--------------------------C-----
Q 016257 245 --KPASVLSISLDGK---YLAMGSKDGDICVVDVKKMEINHWSKRLHL--------------------------G----- 288 (392)
Q Consensus 245 --~~v~~~~~s~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------~----- 288 (392)
.+........+|+ .++.++.+|.++++|.++++.+........ .
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~ 382 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT 382 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence 1122222223565 788999999999999999998633211100 0
Q ss_pred ------cceEEEEEeeCCCeEEEEeC---------------------------------------------CCeEEEEEe
Q 016257 289 ------TSIALVEFCPTQRVVLTASK---------------------------------------------EWGAMITKL 317 (392)
Q Consensus 289 ------~~i~~~~~s~~~~~l~~~~~---------------------------------------------dg~i~iw~~ 317 (392)
..-..++++|+..++++... +|.++.||+
T Consensus 383 p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 383 PAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred CCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 00112788998887776532 367888888
Q ss_pred ecCccccceeeeeee----eeeeeeceEEEEeeecceeeeecccccccccCCCCcccccCCCCC
Q 016257 318 TVPADWKEWQIYSLL----LALFLASAVVFYIFFENSDSFWNFPVARNQHGGPKIESILRDPQS 377 (392)
Q Consensus 318 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p~~~~~~~~~~~ 377 (392)
.+++. .|...... .....+.+.++.++.|+.++.||..+|+.+........+...|..
T Consensus 463 ~tG~~--~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~t 524 (689)
T 1yiq_A 463 VKQQA--AWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVT 524 (689)
T ss_dssp TTTEE--EEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred CCCCe--EeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceE
Confidence 76653 45432211 122335668888889999999999999988654443344444544
No 225
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.38 E-value=3.5e-10 Score=98.07 Aligned_cols=226 Identities=10% Similarity=-0.015 Sum_probs=137.5
Q ss_pred eeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeE
Q 016257 8 TCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGC 87 (392)
Q Consensus 8 ~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i 87 (392)
.+..|+|++.. ++.++.. .+. |+.++..+... ..+. ....+.++.|+|+|+++++. .++ |
T Consensus 52 egp~~~~~~~~--l~~~d~~------~~~--i~~~d~~~~~~-------~~~~-~~~~v~~i~~~~dg~l~v~~-~~g-l 111 (326)
T 2ghs_A 52 EGPTFDPASGT--AWWFNIL------ERE--LHELHLASGRK-------TVHA-LPFMGSALAKISDSKQLIAS-DDG-L 111 (326)
T ss_dssp EEEEEETTTTE--EEEEEGG------GTE--EEEEETTTTEE-------EEEE-CSSCEEEEEEEETTEEEEEE-TTE-E
T ss_pred cCCeEeCCCCE--EEEEECC------CCE--EEEEECCCCcE-------EEEE-CCCcceEEEEeCCCeEEEEE-CCC-E
Confidence 46678887654 3333222 222 55555543322 1122 24679999999999877654 444 8
Q ss_pred EEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC------CCcEEEEeCCCCceeecccCCCCcEEEEE
Q 016257 88 KLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV------DGHLRIMHWPSLRIILDEPKAHKSVLDMD 161 (392)
Q Consensus 88 ~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i~~i~ 161 (392)
.+||..+++... +... ........+..++++|+|+++++... .+.|..++ +++.. .+.........++
T Consensus 112 ~~~d~~~g~~~~-~~~~--~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~ 185 (326)
T 2ghs_A 112 FLRDTATGVLTL-HAEL--ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSIC 185 (326)
T ss_dssp EEEETTTCCEEE-EECS--STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEE
T ss_pred EEEECCCCcEEE-EeeC--CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeE
Confidence 899877665321 1110 00011245889999999987665432 24555555 44432 2222223567899
Q ss_pred ecCCCCeEEEE-cCCCcEEEEECC--CC-ee--eEEEec--CCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC
Q 016257 162 FSLDSEFLATT-STDGSARIWKTE--DG-VA--WTFLTR--NSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST 233 (392)
Q Consensus 162 ~~~~~~~l~~~-~~d~~i~vwd~~--~~-~~--~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~ 233 (392)
|+|+++.++.+ +.++.|.+||+. ++ +. ...+.. .....+..++++++|.. .++...++.|.+||. +
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l-----wva~~~~~~v~~~d~-~ 259 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI-----WNARWGEGAVDRYDT-D 259 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE-----EEEEETTTEEEEECT-T
T ss_pred EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE-----EEEEeCCCEEEEECC-C
Confidence 99999876554 556889999986 55 31 112211 12235788999999973 333334578999998 4
Q ss_pred ceeeeeecccCCCcEEEEEC-CCCCEEEEEeCC
Q 016257 234 WNKIGHKRLLRKPASVLSIS-LDGKYLAMGSKD 265 (392)
Q Consensus 234 ~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~d 265 (392)
++.+..+......+++++|+ |+++.|++++..
T Consensus 260 g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 260 GNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 66666666656679999998 888877665543
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.34 E-value=5.3e-11 Score=103.83 Aligned_cols=255 Identities=12% Similarity=-0.064 Sum_probs=164.8
Q ss_pred eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe----------CCCcEEEEeCCCCceeecccCC--
Q 016257 86 GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG----------VDGHLRIMHWPSLRIILDEPKA-- 153 (392)
Q Consensus 86 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~-- 153 (392)
+|.++|..+.+....+.... .+ .+.++||+++++++. .++.|.+||+.+++.+.++.-+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-------~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-------LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-------TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred eEEEEECCCCeEEEEEeCCC-------CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence 78899999888766655422 24 799999999998886 3688999999999988776432
Q ss_pred C-----CcEEEEEecCCCCeEEEEcC--CCcEEE--EECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCcc
Q 016257 154 H-----KSVLDMDFSLDSEFLATTST--DGSARI--WKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (392)
Q Consensus 154 ~-----~~i~~i~~~~~~~~l~~~~~--d~~i~v--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~ 224 (392)
. .....++++|||++++++.. +..+.+ +|+.+ +..+.... . ....|++... .++.+.|+
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~--~---~~~~p~g~~~----~~~~~~dg 185 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS--C---FHIHPGAAAT----HYLGSCPA 185 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS--C---CCCEEEETTE----EECCCCTT
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC--c---eEEccCCCeE----EEEEcCCC
Confidence 0 23567899999999998874 356888 88876 44443221 1 2245666653 24556778
Q ss_pred EEEEEeCCC-----ceeee----eecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCce--eeeeeec------cc-
Q 016257 225 LLAVYDIST-----WNKIG----HKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKME--INHWSKR------LH- 286 (392)
Q Consensus 225 ~i~v~d~~~-----~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~------~~- 286 (392)
.+.+.|+.+ ++... .+.....+. . ++++..++..+. +.+.+.|..+.. ....+.. .+
T Consensus 186 ~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~ 260 (368)
T 1mda_H 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADN 260 (368)
T ss_dssp SCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTT
T ss_pred CEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccc
Confidence 888888876 43321 111122333 3 666666666666 999999997542 2222110 00
Q ss_pred -cCcceEEEEEeeCCCeEEEEeC---------CCeEEEEEeecCccccceeeeeeeeeeeee--ceEEEEee--ecceee
Q 016257 287 -LGTSIALVEFCPTQRVVLTASK---------EWGAMITKLTVPADWKEWQIYSLLLALFLA--SAVVFYIF--FENSDS 352 (392)
Q Consensus 287 -~~~~i~~~~~s~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~d~~i~ 352 (392)
.......++++|+++.++.+.. ++.+.++|+...+....+.+...+.++.+. ...++++. .++.|.
T Consensus 261 ~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 261 FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred cccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 0111222689999997776533 235669999887766666555555555443 23344444 389999
Q ss_pred eecccccccccCCC
Q 016257 353 FWNFPVARNQHGGP 366 (392)
Q Consensus 353 ~W~~~~~~~~~~~p 366 (392)
++|+.+++.+...|
T Consensus 341 VID~~t~kvv~~I~ 354 (368)
T 1mda_H 341 IYDAASDQDQSSVE 354 (368)
T ss_dssp EEESSSCEEEEECC
T ss_pred EEECCCCcEEEEEE
Confidence 99999988765544
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.34 E-value=1.2e-13 Score=121.84 Aligned_cols=184 Identities=15% Similarity=0.052 Sum_probs=105.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceE-
Q 016257 123 DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIE- 201 (392)
Q Consensus 123 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~- 201 (392)
++..+++++.|+.|+.||.++++.+.+... +.+.+..+..++..+++++.|+.|+.||.++++.+..+..+....+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999998876654 44444445567778888889999999999988876665432211111
Q ss_pred EEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeee
Q 016257 202 LCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHW 281 (392)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 281 (392)
+..+..++. +++++.++.++.||.++++.+..+..+. ...++|++..+++++.|+.|+.||.++++.+..
T Consensus 86 sp~~~~~~~------v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 86 SPCRSSDGI------LYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp CSCC-----------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred CceEecCCE------EEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 111112332 4667788999999999998876555432 234567888999999999999999999986554
Q ss_pred eeccccCcceEEEEEeeCC---CeEEEEeCCCeEEEEEeecCcc
Q 016257 282 SKRLHLGTSIALVEFCPTQ---RVVLTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 282 ~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~iw~~~~~~~ 322 (392)
... + .....+++++. ..+++++.||.++.||...++.
T Consensus 156 ~~~-~---~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 156 ATY-F---DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp EEE-E---EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred Eec-c---cccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 421 1 11223333332 4677888999999999876543
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=4.8e-10 Score=97.95 Aligned_cols=250 Identities=8% Similarity=-0.090 Sum_probs=148.6
Q ss_pred eeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC--
Q 016257 6 TVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT-- 83 (392)
Q Consensus 6 ~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~-- 83 (392)
....++++|++ .++++..... ++.+.||.++ .+ .+..-+.......+|-..+..++++++++++++-..
T Consensus 18 ~p~~va~~~~g---~~~v~~~~~~----~~~~~l~~~~-~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~ 88 (343)
T 2qe8_A 18 APGNITLTPDG---RLFLSLHQFY----QPEMQVAELT-QD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ 88 (343)
T ss_dssp CEEEEEECTTS---CEEEEECGGG----CCSCSEEEEE-TT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH
T ss_pred CcceEEECCCC---CEEEEeCCCC----CCceEEEEEC-CC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC
Confidence 46678888887 3444322110 1126677776 22 221111101112345678999999999876665433
Q ss_pred ---CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEE-EEe---CCCcEEEEeCCCCceeecccCC---
Q 016257 84 ---NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGG---VDGHLRIMHWPSLRIILDEPKA--- 153 (392)
Q Consensus 84 ---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~---~dg~i~i~d~~~~~~~~~~~~~--- 153 (392)
++.|.+||+.+++....+.... ....+...+..+++++++..++ +.. .++.|.+||+.+++.......+
T Consensus 89 ~~~~~~i~~~d~~tg~~~~~~~~~~-~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~ 167 (343)
T 2qe8_A 89 SKSVPKLVAWDTLNNQLSRVIYLPP-PITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI 167 (343)
T ss_dssp HTSCCEEEEEETTTTEEEEEEECCT-TTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred cCCCCeEEEEECCCCeEEEEEECCh-hhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence 5789999998776444332211 1112335678999998655554 444 5788999999877654433221
Q ss_pred --------------------------CCcEEEEEecCCCCeEEEEcCCC-cEEEEECC---CCe-----eeE--EEecCC
Q 016257 154 --------------------------HKSVLDMDFSLDSEFLATTSTDG-SARIWKTE---DGV-----AWT--FLTRNS 196 (392)
Q Consensus 154 --------------------------~~~i~~i~~~~~~~~l~~~~~d~-~i~vwd~~---~~~-----~~~--~~~~~~ 196 (392)
...+..|+|+|+++.|+++..++ .+..++.. .+. ... ....+
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~- 246 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE- 246 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE-
T ss_pred cccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc-
Confidence 01357899999999888877665 44444431 110 000 11111
Q ss_pred CcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc-cCCCcEEEEECCCCCEEEEEeCCCcEEEE
Q 016257 197 DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVV 271 (392)
Q Consensus 197 ~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 271 (392)
......++++++|.. .++...++.|.+||.++++....... .......+++.++++++++.+..+.+.+|
T Consensus 247 ~g~pdgia~d~~G~l-----~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 247 KPICDGISIDKDHNI-----YVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp CCSCSCEEECTTCCE-----EEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred CCCCceEEECCCCCE-----EEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 124567999999874 56667788999999855554322222 23467899999999888877655544333
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.32 E-value=3.1e-09 Score=94.04 Aligned_cols=274 Identities=11% Similarity=0.036 Sum_probs=168.7
Q ss_pred CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCC--CCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeeccc
Q 016257 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQD--AGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEP 151 (392)
Q Consensus 74 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 151 (392)
.+..+++++.++.|..+|..+++..............+ ...+.+. ...++..+++++.++.|..+|.++++......
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 35677888888899999998887655443211100000 1222221 22245678888899999999999998775544
Q ss_pred CCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcc----eEEEEecCCCCcceEEEEEEeCCccEEE
Q 016257 152 KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEK----IELCRFSKDGTKPFLFCTVQRGDKALLA 227 (392)
Q Consensus 152 ~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~~~~~~~d~~i~ 227 (392)
............ +..++.++.++.+..+|.++++.+.......... ....... ++. ++.+..++.+.
T Consensus 131 ~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~------v~~g~~~g~l~ 201 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGA------AVVGGDNGRVS 201 (376)
T ss_dssp CSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTE------EEECCTTTEEE
T ss_pred CCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCE------EEEEcCCCEEE
Confidence 332211111222 4578888889999999999998877765432110 0112222 332 56778889999
Q ss_pred EEeCCCceeeeeecccCCC-------cEEEEECC--CCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEee
Q 016257 228 VYDISTWNKIGHKRLLRKP-------ASVLSISL--DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCP 298 (392)
Q Consensus 228 v~d~~~~~~~~~~~~~~~~-------v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 298 (392)
.+|.++++.+-........ +..+...| .+..+++++.++.+..+|.++++...... ......+..
T Consensus 202 ~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~----~~~~~~~~~-- 275 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE----LGSVNDFIV-- 275 (376)
T ss_dssp EEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC----CCCEEEEEE--
T ss_pred EEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc----CCCCCCceE--
Confidence 9999998876544322100 00011111 25677888889999999999998775442 223344443
Q ss_pred CCCeEEEEeCCCeEEEEEeecCccccceeee----eeeeeeeeeceEEEEeeecceeeeecccccccccCC
Q 016257 299 TQRVVLTASKEWGAMITKLTVPADWKEWQIY----SLLLALFLASAVVFYIFFENSDSFWNFPVARNQHGG 365 (392)
Q Consensus 299 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~ 365 (392)
++..++.++.++.+..++...++. .|... ............++.+..++.+..+|..+|+.+...
T Consensus 276 ~~~~l~~~~~~g~l~~~d~~tG~~--~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 276 DGNRIYLVDQNDRVMALTIDGGVT--LWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp ETTEEEEEETTCCEEEEETTTCCE--EEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCcE--EEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 456788888899999998876543 34322 011122334567777778899999999998865443
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.29 E-value=7.9e-09 Score=91.43 Aligned_cols=257 Identities=8% Similarity=-0.034 Sum_probs=158.6
Q ss_pred CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCC
Q 016257 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (392)
Q Consensus 74 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 153 (392)
++..+++++.++.|..+|..+++.......... ....+ .. .+..+++++.++.+..+|.++++........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~---~~~~p----~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE---ALSRP----VV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSC---CCSCC----EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc---eEcCC----EE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCC
Confidence 456788888999999999988876554432110 01111 11 2447888888999999999999877654432
Q ss_pred CCcE-----EEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcc---eEE---EEecC--CCCcceEEEEEEe
Q 016257 154 HKSV-----LDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEK---IEL---CRFSK--DGTKPFLFCTVQR 220 (392)
Q Consensus 154 ~~~i-----~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~---v~~---~~~~~--~~~~~~~~~~~~~ 220 (392)
.... ...... +..++.++.++.+..+|.++++.+.......... +.. +.-.| .+.. ++.+
T Consensus 173 ~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----v~~~ 245 (376)
T 3q7m_A 173 MPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGV-----VFAL 245 (376)
T ss_dssp C-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTE-----EEEE
T ss_pred CCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCE-----EEEE
Confidence 2111 111222 4567888889999999999998877665322100 000 00111 1222 5667
Q ss_pred CCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCC
Q 016257 221 GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQ 300 (392)
Q Consensus 221 ~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 300 (392)
+.++.+..+|.++++.+-.... .....+.. ++..+++++.++.|..+|.++++..-...... ...+..... .+
T Consensus 246 ~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~~~~--~~ 318 (376)
T 3q7m_A 246 AYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLL-HRLLTSPVL--YN 318 (376)
T ss_dssp CTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTT-TSCCCCCEE--ET
T ss_pred ecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccC-CCcccCCEE--EC
Confidence 7889999999999887644432 23344444 46688888889999999999998765543122 222333333 34
Q ss_pred CeEEEEeCCCeEEEEEeecCccccceeeee----eeeeeeeeceEEEEeeecceeeeec
Q 016257 301 RVVLTASKEWGAMITKLTVPADWKEWQIYS----LLLALFLASAVVFYIFFENSDSFWN 355 (392)
Q Consensus 301 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~i~~W~ 355 (392)
..|+.++.+|.+.+++...++. .|.... ...........++.+..++.++.++
T Consensus 319 ~~l~v~~~~g~l~~~d~~tG~~--~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 319 GNLVVGDSEGYLHWINVEDGRF--VAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCE--EEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcE--EEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 5788889999999999876543 232221 1111223455666777788887775
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.28 E-value=3.7e-09 Score=92.83 Aligned_cols=190 Identities=14% Similarity=0.116 Sum_probs=126.2
Q ss_pred CeeEEEEcCCCCeEEEEeCC------CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-------
Q 016257 65 DPMTIAVNPSGDDFVCSTTN------GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG------- 131 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------- 131 (392)
....+..+|+| .++++..+ +.+.++|..+.+...+...... ....-..+.|+|+++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~----~~~~~Yd~~~~p~~~~mvsS~wg~p~~~ 213 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRG----DQYLAYDFWWNLPNEVLVSSEWAVPNTI 213 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCT----TCCCCCCEEEETTTTEEEECBCCCHHHH
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCC----CccccceEEECCCCCEEEEccCcCcccc
Confidence 56678889999 66666555 6899999988876655442211 112335688999999888874
Q ss_pred ------------CCCcEEEEeCCCCceeecccCC-C-CcEEEEEe--cCCCCeEEEEcC------CCcEEEEECCCCee-
Q 016257 132 ------------VDGHLRIMHWPSLRIILDEPKA-H-KSVLDMDF--SLDSEFLATTST------DGSARIWKTEDGVA- 188 (392)
Q Consensus 132 ------------~dg~i~i~d~~~~~~~~~~~~~-~-~~i~~i~~--~~~~~~l~~~~~------d~~i~vwd~~~~~~- 188 (392)
...+|.+||+.+++.+.++... . .....+.| +|++++++++++ +++|.+|....++.
T Consensus 214 ~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~ 293 (462)
T 2ece_A 214 EDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWN 293 (462)
T ss_dssp TTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEE
T ss_pred ccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCcee
Confidence 3689999999988766555443 1 24456655 999998877764 56787766554421
Q ss_pred -eEEEecCC-----------------CcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC---ceeeeeecccC---
Q 016257 189 -WTFLTRNS-----------------DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST---WNKIGHKRLLR--- 244 (392)
Q Consensus 189 -~~~~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~---~~~~~~~~~~~--- 244 (392)
.+.+.... ......+.+++|++++| ++.-..+.|.+||+.. .+.+..+....
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY----VSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~ 369 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY----LSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFH 369 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE----EEETTTTEEEEEECSSTTSCEEEEEEECBTTTT
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE----EEeCCCCEEEEEEecCCCCcEEEEEEEeCCeec
Confidence 11110000 13467899999999743 5555678999999853 23443333221
Q ss_pred -----------CCcEEEEECCCCCEEEEEe
Q 016257 245 -----------KPASVLSISLDGKYLAMGS 263 (392)
Q Consensus 245 -----------~~v~~~~~s~~~~~l~~~~ 263 (392)
..-..++++|||++|+++.
T Consensus 370 ~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 370 RADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1357899999999999887
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.28 E-value=9.6e-10 Score=104.56 Aligned_cols=293 Identities=12% Similarity=0.072 Sum_probs=181.7
Q ss_pred CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCC----CCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecc
Q 016257 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQ----DAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150 (392)
Q Consensus 75 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 150 (392)
+..|++++.++.|.-+|..+++...+.......... .......+++ ++..|++++.|+.|..+|.++++.+.+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 446677777788888888888766555332110000 0000112222 4568888899999999999999987665
Q ss_pred cCC-C----CcEEE-EEecCCCCeEEEEcC------CCcEEEEECCCCeeeEEEecCCCc--------------------
Q 016257 151 PKA-H----KSVLD-MDFSLDSEFLATTST------DGSARIWKTEDGVAWTFLTRNSDE-------------------- 198 (392)
Q Consensus 151 ~~~-~----~~i~~-i~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~-------------------- 198 (392)
... . ..+.+ ... .+..+++++. ++.|+.+|.++++.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 443 1 11111 111 2345555543 689999999999988777542211
Q ss_pred -----------ceEEEEecCCCCcceEEEEEEeCCcc-------------------EEEEEeCCCceeeeeecccC----
Q 016257 199 -----------KIELCRFSKDGTKPFLFCTVQRGDKA-------------------LLAVYDISTWNKIGHKRLLR---- 244 (392)
Q Consensus 199 -----------~v~~~~~~~~~~~~~~~~~~~~~~d~-------------------~i~v~d~~~~~~~~~~~~~~---- 244 (392)
....++++|++.. ++.+..++ .|..+|.++++.+-.+....
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~-----vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w 307 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNT-----MYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW 307 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTE-----EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred CceeEeCCCcccccceeEcCCCCE-----EEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc
Confidence 0124678888775 33343332 59999999998875544311
Q ss_pred -----CCcEEEEECCCC---CEEEEEeCCCcEEEEecCCceeeeeeecccc---------Ccce----------------
Q 016257 245 -----KPASVLSISLDG---KYLAMGSKDGDICVVDVKKMEINHWSKRLHL---------GTSI---------------- 291 (392)
Q Consensus 245 -----~~v~~~~~s~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~i---------------- 291 (392)
.....+....+| ..++.++.+|.++++|..+++.+........ ..++
T Consensus 308 d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P 387 (677)
T 1kb0_A 308 DYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVP 387 (677)
T ss_dssp CCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSS
T ss_pred ccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECc
Confidence 122233344477 6899999999999999999998755432110 0011
Q ss_pred --------EEEEEeeCCCeEEEEeCC-------------------------------------------CeEEEEEeecC
Q 016257 292 --------ALVEFCPTQRVVLTASKE-------------------------------------------WGAMITKLTVP 320 (392)
Q Consensus 292 --------~~~~~s~~~~~l~~~~~d-------------------------------------------g~i~iw~~~~~ 320 (392)
..++++|++.++++...+ |.|..||+.++
T Consensus 388 ~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG 467 (677)
T 1kb0_A 388 GPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ 467 (677)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT
T ss_pred CcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC
Confidence 157889988877775432 67888888765
Q ss_pred ccccceeeeee--e-e-eeeeeceEEEEeeecceeeeecccccccccCCCCcccccCCCCCc
Q 016257 321 ADWKEWQIYSL--L-L-ALFLASAVVFYIFFENSDSFWNFPVARNQHGGPKIESILRDPQSS 378 (392)
Q Consensus 321 ~~~~~~~~~~~--~-~-~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p~~~~~~~~~~~~ 378 (392)
+. .|..... . . ....+...++.+..|+.+++||..+|+.+........+...|..+
T Consensus 468 ~~--~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y 527 (677)
T 1kb0_A 468 KA--AWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTY 527 (677)
T ss_dssp EE--EEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred cE--EeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEE
Confidence 43 4544321 1 1 122345577778889999999999999876655444455555553
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.27 E-value=5.9e-09 Score=99.18 Aligned_cols=240 Identities=9% Similarity=0.005 Sum_probs=160.2
Q ss_pred CCCeEEEEeCCCeEEEEEEeCCccceeeccc-cCCCCCCCCCeEE-EEecCCCCEEEEEeC------CCcEEEEeCCCCc
Q 016257 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAK-KMPPLQDAGPQKC-LSFSVDGSRFAAGGV------DGHLRIMHWPSLR 145 (392)
Q Consensus 74 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~~~~~~~~v~~-~~~s~~~~~l~~~~~------dg~i~i~d~~~~~ 145 (392)
++..|++++.|+.|..+|..+++...+.... ... ....+.+ ... .+..+++++. ++.|+.+|.++++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~---~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQK---GSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGE 201 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCC---SSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcC---cCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCc
Confidence 4567888889999999999999876665432 100 0001110 011 2345665543 6899999999999
Q ss_pred eeecccCCCC--------------------------------cEEEEEecCCCCeEEEEcCCC-----------------
Q 016257 146 IILDEPKAHK--------------------------------SVLDMDFSLDSEFLATTSTDG----------------- 176 (392)
Q Consensus 146 ~~~~~~~~~~--------------------------------~i~~i~~~~~~~~l~~~~~d~----------------- 176 (392)
.+.+...... ....++++|++..++.++.++
T Consensus 202 ~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~ 281 (677)
T 1kb0_A 202 RKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLY 281 (677)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred EEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCee
Confidence 8755432111 113578899888888887664
Q ss_pred --cEEEEECCCCeeeEEEecCCC--------cceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCC-
Q 016257 177 --SARIWKTEDGVAWTFLTRNSD--------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRK- 245 (392)
Q Consensus 177 --~i~vwd~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~- 245 (392)
.|..+|.++++.+..++..+. .....+....+|+.. -.++.++.+|.++++|.++++.+........
T Consensus 282 ~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~--~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~ 359 (677)
T 1kb0_A 282 LASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPR--KVILHAPKNGFFFVLDRTNGKFISAKNFVPVN 359 (677)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEE--EEEEECCTTSEEEEEETTTCCEEEEEESSCCS
T ss_pred eEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEe--eEEEEECCCCEEEEEECCCCCEeccccccccC
Confidence 499999999998877764321 112223333456311 1268888999999999999988754432110
Q ss_pred ----------Cc------------------------EEEEECCCCCEEEEEeCC--------------------------
Q 016257 246 ----------PA------------------------SVLSISLDGKYLAMGSKD-------------------------- 265 (392)
Q Consensus 246 ----------~v------------------------~~~~~s~~~~~l~~~~~d-------------------------- 265 (392)
++ ..++++|++.++++...+
T Consensus 360 ~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 439 (677)
T 1kb0_A 360 WASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTG 439 (677)
T ss_dssp SEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGT
T ss_pred cccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccc
Confidence 00 146889998888876432
Q ss_pred -----------------CcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccc
Q 016257 266 -----------------GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 266 -----------------g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
|.|..||+.+++..-.... ..++....+..++..++.++.||.+++||..+++..
T Consensus 440 ~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~---~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 440 WNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH---VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp CCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccccccccCCCCCccEEEEEeCCCCcEEeecCC---CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 6799999999998766532 344555667788888999999999999999877653
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.27 E-value=4.9e-09 Score=86.51 Aligned_cols=197 Identities=11% Similarity=0.036 Sum_probs=136.2
Q ss_pred CeEEEEecCCCCEEEEEeC--CCcEEEEeCCCCceeecccCCCC-cEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeE
Q 016257 114 PQKCLSFSVDGSRFAAGGV--DGHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT 190 (392)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 190 (392)
....+.|++++.+.++.+. ++.|+++|+++++.+....-... ....+++.. ++..++.-.++.+.++|..+.+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEE
Confidence 4589999998744444332 57999999999998776543222 234556652 2344455567899999999999999
Q ss_pred EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC-----CCcEEEEECCCCCEEEEEeCC
Q 016257 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMGSKD 265 (392)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~d 265 (392)
++..... ....+++|++. ++.+..++.|.++|.++.+.+..+.... ...+.+.|. +|+..+....+
T Consensus 101 ~i~~g~~---~g~glt~Dg~~-----l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 101 NFTHQMK---DGWGLATDGKI-----LYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp EEECCSS---SCCEEEECSSS-----EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EEECCCC---CeEEEEECCCE-----EEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCC
Confidence 8865411 12446678887 3444568899999999988776665322 235678887 67555555467
Q ss_pred CcEEEEecCCceeeeeeeccc-----------cCcceEEEEEeeCCCe-EEEEeCCCeEEEEEeecC
Q 016257 266 GDICVVDVKKMEINHWSKRLH-----------LGTSIALVEFCPTQRV-VLTASKEWGAMITKLTVP 320 (392)
Q Consensus 266 g~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~-l~~~~~dg~i~iw~~~~~ 320 (392)
+.|.+.|..+++....+.... .......++|+|+++. ++++...+.+..-++...
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 899999999999888775321 0135689999999874 555656788888887654
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.26 E-value=2.5e-09 Score=101.90 Aligned_cols=223 Identities=10% Similarity=0.070 Sum_probs=142.4
Q ss_pred CCeEEEEEEeCCccceeeccccCCCC------------------------CCCCCeEEEEecCCCCEEEEEeCCCc----
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPL------------------------QDAGPQKCLSFSVDGSRFAAGGVDGH---- 135 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~------------------------~~~~~v~~~~~s~~~~~l~~~~~dg~---- 135 (392)
++.|+.||..+++...++........ .+......++++|++.+++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 68899999999887665542110000 00111235788898889999887763
Q ss_pred ---------------EEEEeCCCCceeecccCCC---------CcEEEEEecCCCC---eEEEEcCCCcEEEEECCCCee
Q 016257 136 ---------------LRIMHWPSLRIILDEPKAH---------KSVLDMDFSLDSE---FLATTSTDGSARIWKTEDGVA 188 (392)
Q Consensus 136 ---------------i~i~d~~~~~~~~~~~~~~---------~~i~~i~~~~~~~---~l~~~~~d~~i~vwd~~~~~~ 188 (392)
|..+|.++++.+..+...+ .+..-.....+|+ .++.++.+|.++++|.++++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 9999999999876654321 1122222223554 788899999999999999998
Q ss_pred eEEEecCCCcc--------------------------------------eEEEEecCCCCcceEEEEE------------
Q 016257 189 WTFLTRNSDEK--------------------------------------IELCRFSKDGTKPFLFCTV------------ 218 (392)
Q Consensus 189 ~~~~~~~~~~~--------------------------------------v~~~~~~~~~~~~~~~~~~------------ 218 (392)
+.......... -..++++|+...+|+...-
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 75433211000 1126778877653321000
Q ss_pred ----------Ee------------------CCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEE
Q 016257 219 ----------QR------------------GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICV 270 (392)
Q Consensus 219 ----------~~------------------~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 270 (392)
.+ ..++.|..||+++++.+-....+. +...-.++..+.++++++.||.++.
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a 500 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIA 500 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEE
Confidence 00 014889999999999876655433 2333355567889999999999999
Q ss_pred EecCCceeeeeeeccccCcceEEEEEeeCCC-eEEEEeC
Q 016257 271 VDVKKMEINHWSKRLHLGTSIALVEFCPTQR-VVLTASK 308 (392)
Q Consensus 271 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~ 308 (392)
||.++++.+..+...+ ...-.-+.|..+|+ ++++.+.
T Consensus 501 ~D~~tG~~lw~~~~~~-~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 501 YAADTGEKLWEQPAAS-GVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EETTTCCEEEEEECSS-CCCSCCEEEEETTEEEEEEEEC
T ss_pred EECCCCccceeeeCCC-CcccCceEEEECCEEEEEEEec
Confidence 9999999987765443 33334467788888 4444443
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.26 E-value=8e-11 Score=106.91 Aligned_cols=219 Identities=11% Similarity=0.052 Sum_probs=150.8
Q ss_pred CCCeEEEEeC-CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEe-c-CCCCEEEEEe------------------C
Q 016257 74 SGDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF-S-VDGSRFAAGG------------------V 132 (392)
Q Consensus 74 ~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s-~~~~~l~~~~------------------~ 132 (392)
||++++.... +++|.+.|+.+.+....+.. ........+++ + |+++++++++ .
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~i------p~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEI------PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEEC------SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeC------CCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 8888777654 56799999998875543321 12345788888 5 8999998884 2
Q ss_pred CCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCC------------------------------------
Q 016257 133 DGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG------------------------------------ 176 (392)
Q Consensus 133 dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~------------------------------------ 176 (392)
++.+.+.|.++.+...++.-.. ....++++|+|+++++++.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 4579999999887766654322 346678999999988887543
Q ss_pred --cEEEEECCC--Cee-eEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCce------------eeee
Q 016257 177 --SARIWKTED--GVA-WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN------------KIGH 239 (392)
Q Consensus 177 --~i~vwd~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~------------~~~~ 239 (392)
.|.+.|.++ ++. +..+.... ...++.++|||+++ ++++..+..|.++|+.+.+ ....
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~--~PhGv~~sPDGk~v----~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIAN--NPHGCNMAPDKKHL----CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEES--SCCCEEECTTSSEE----EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred ECcEEEEeCcccCCceeEEEEecCC--CceEEEEcCCCCEE----EEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence 477778776 444 45554332 46789999999973 5677788999999999653 2222
Q ss_pred ecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCC----------ceeeeeeeccccCcc-----eEEEEEeeCCCeEE
Q 016257 240 KRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKK----------MEINHWSKRLHLGTS-----IALVEFCPTQRVVL 304 (392)
Q Consensus 240 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~~~-----i~~~~~s~~~~~l~ 304 (392)
. ........++|+|+|...++.-.|+.|.+||+.+ .+.+..+. .| -.+ -..+.++|||++|+
T Consensus 327 v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid-V~-yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 327 P-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD-VH-YQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp C-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE-CS-SCEEEEEETTTTSTTCCSSEEE
T ss_pred c-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee-cc-cccccceeccceEeCCCCCEEE
Confidence 2 2345678899999993334455789999999987 44555443 22 111 11234579999999
Q ss_pred EEeC
Q 016257 305 TASK 308 (392)
Q Consensus 305 ~~~~ 308 (392)
+...
T Consensus 404 ~~Nk 407 (595)
T 1fwx_A 404 CLSK 407 (595)
T ss_dssp EEES
T ss_pred EcCC
Confidence 8864
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.24 E-value=2.2e-08 Score=84.04 Aligned_cols=222 Identities=8% Similarity=-0.046 Sum_probs=142.1
Q ss_pred CCeeEEEEcCCCCeEEEEe-CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeC
Q 016257 64 GDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHW 141 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~ 141 (392)
..+..++|+|++..|+.+. .++.|..++...... ...... .......+++.+++..|+.+. ..+.|.++++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~------~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIRQ------DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEECT------TCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEEC------CCCCccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 4578999999776666554 567899999865542 121110 124678999999766666554 4678999998
Q ss_pred CCCceeecccCCCCcEEEEEecCCCCeEEEEcC---CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEE
Q 016257 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATTST---DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
..................++++|++..|+.+.. .+.|..+++.. +....+..........+++++++..+ .+
T Consensus 109 ~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~l----yv 183 (267)
T 1npe_A 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQL----CW 183 (267)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEE----EE
T ss_pred CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEE----EE
Confidence 643322212222246789999997666655543 36788888753 33333332222357899999988763 35
Q ss_pred EeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEe
Q 016257 219 QRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFC 297 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 297 (392)
+....+.|.++|............ ......++.. +..|+.+. ..+.|..+|..+++....+..+. ......+++.
T Consensus 184 ~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~-~~~p~gi~~~ 259 (267)
T 1npe_A 184 VDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK-QTRLYGITIA 259 (267)
T ss_dssp EETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSS-CCCCCCEEEE
T ss_pred EECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccc-ccccceeeec
Confidence 566678999999986543333322 2334566654 45555554 56889999999999887764332 2347788888
Q ss_pred eCCC
Q 016257 298 PTQR 301 (392)
Q Consensus 298 ~~~~ 301 (392)
|++.
T Consensus 260 ~~~~ 263 (267)
T 1npe_A 260 LSQC 263 (267)
T ss_dssp CSCC
T ss_pred CccC
Confidence 8764
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.22 E-value=1.7e-09 Score=93.71 Aligned_cols=219 Identities=12% Similarity=-0.021 Sum_probs=143.6
Q ss_pred CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCC
Q 016257 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAH 154 (392)
Q Consensus 75 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 154 (392)
+..|..++.++.+..+|.. ++....... ....+.++...+++. +..++.++.|..+|.+ ++.........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~-------~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT-------KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC-------SSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC-------CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence 4567778888889999876 443333221 122345566666775 6667778999999988 77655554444
Q ss_pred CcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCc
Q 016257 155 KSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTW 234 (392)
Q Consensus 155 ~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~ 234 (392)
..+.++...+++..++ ++ +.+..+| .+++......... ..+.++...+++. +..++.++.+..+|. ++
T Consensus 177 ~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~-~~~~~~~~~~~g~------l~v~t~~~gl~~~~~-~g 244 (330)
T 3hxj_A 177 AITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGY-WTVTRPAISEDGT------IYVTSLDGHLYAINP-DG 244 (330)
T ss_dssp CCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSS-CCCSCCEECTTSC------EEEEETTTEEEEECT-TS
T ss_pred CceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCC-cceeceEECCCCe------EEEEcCCCeEEEECC-CC
Confidence 5667777777776444 44 7899999 6776665554332 3578888888876 566777788888885 44
Q ss_pred eeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEE
Q 016257 235 NKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMI 314 (392)
Q Consensus 235 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 314 (392)
+.+.........+..+.+.+++ .|.+++.+|.|..+|. +++...... .. ...+.++...++|+ |..++.+|.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~-~~-~~~~~~~~~d~~g~-l~~gt~~G~~~~ 319 (330)
T 3hxj_A 245 TEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFE-TG-SWIIATPVIDENGT-IYFGTRNGKFYA 319 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEE-CS-SCCCSCCEECTTCC-EEEECTTSCEEE
T ss_pred CEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEE-cC-CccccceEEcCCCE-EEEEcCCCeEEE
Confidence 5544444333334455666565 5666777888999996 566554442 22 45667777777776 566889999998
Q ss_pred EEeecC
Q 016257 315 TKLTVP 320 (392)
Q Consensus 315 w~~~~~ 320 (392)
......
T Consensus 320 ~~~~~~ 325 (330)
T 3hxj_A 320 LFNLEH 325 (330)
T ss_dssp EEC---
T ss_pred Eecccc
Confidence 876643
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.18 E-value=4.1e-10 Score=97.71 Aligned_cols=259 Identities=11% Similarity=0.037 Sum_probs=156.0
Q ss_pred EEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceee
Q 016257 69 IAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL 148 (392)
Q Consensus 69 ~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 148 (392)
+....++ .|..++.++.|..|| .+++....... ....+.++...+++. |..++.+ +..+|. +++...
T Consensus 25 ~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~-------~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~ 91 (330)
T 3hxj_A 25 PILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKS-------GEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKW 91 (330)
T ss_dssp CEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCG-------GGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGG
T ss_pred ceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEec-------CCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEE
Confidence 3344455 566667777799999 66654332211 122345666666664 5555544 888885 555544
Q ss_pred cccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEE
Q 016257 149 DEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAV 228 (392)
Q Consensus 149 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v 228 (392)
.............+. +..+..++.++.+..+|.+ ++......... ..+.++...+++. +..++.++.|..
T Consensus 92 ~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~-~~~~~~~~~~~g~------l~vgt~~~~l~~ 161 (330)
T 3hxj_A 92 RFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKK-AIYATPIVSEDGT------IYVGSNDNYLYA 161 (330)
T ss_dssp GSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSS-CCCSCCEECTTSC------EEEECTTSEEEE
T ss_pred EEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCC-ceeeeeEEcCCCE------EEEEcCCCEEEE
Confidence 333222222233333 5567778888999999988 76665555432 2466677777777 577788899999
Q ss_pred EeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeC
Q 016257 229 YDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASK 308 (392)
Q Consensus 229 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 308 (392)
+|.. ++...........+.++...+++.+.+.. +.|..+| .+++...... .. ...+.++...++|. |..++.
T Consensus 162 ~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~-~~-~~~~~~~~~~~~g~-l~v~t~ 233 (330)
T 3hxj_A 162 INPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFY-AG-YWTVTRPAISEDGT-IYVTSL 233 (330)
T ss_dssp ECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEEC-CS-SCCCSCCEECTTSC-EEEEET
T ss_pred ECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEc-cC-CcceeceEECCCCe-EEEEcC
Confidence 9998 76665555555567777887788755544 7799999 6666554432 22 45677888887775 555667
Q ss_pred CCeEEEEEeecCccccceeeee---eeeeeeee-ceEEEEeeecceeeeecccccccc
Q 016257 309 EWGAMITKLTVPADWKEWQIYS---LLLALFLA-SAVVFYIFFENSDSFWNFPVARNQ 362 (392)
Q Consensus 309 dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~d~~i~~W~~~~~~~~ 362 (392)
++.+..++.. .. ..|.... ........ .+.+..+..++.+..+|. .++.+
T Consensus 234 ~~gl~~~~~~-g~--~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~ 287 (330)
T 3hxj_A 234 DGHLYAINPD-GT--EKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEK 287 (330)
T ss_dssp TTEEEEECTT-SC--EEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEE
T ss_pred CCeEEEECCC-CC--EeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEE
Confidence 7777777532 11 1232211 01111222 455666666778888885 45543
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.11 E-value=1.2e-07 Score=81.76 Aligned_cols=250 Identities=10% Similarity=-0.002 Sum_probs=151.0
Q ss_pred eeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCC-------------CCCCCCCeEEEEecC-CC
Q 016257 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMP-------------PLQDAGPQKCLSFSV-DG 124 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-------------~~~~~~~v~~~~~s~-~~ 124 (392)
+.+.-....+++|++++++++++..++.|..|+..+.... .+...... .......+..+++.+ ++
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 4443356778999999987888888899999987654321 11100000 000013578899997 56
Q ss_pred CEEEEEeCCCcEEEEeCCCCcee--ecccCC--CCcEEEEEecC-CCCeEEEEcC-----------------CCcEEEEE
Q 016257 125 SRFAAGGVDGHLRIMHWPSLRII--LDEPKA--HKSVLDMDFSL-DSEFLATTST-----------------DGSARIWK 182 (392)
Q Consensus 125 ~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~--~~~i~~i~~~~-~~~~l~~~~~-----------------d~~i~vwd 182 (392)
.|+++...+.+..+|..+++.. ...... ......+++.+ +|+..++-.. ++.|..+|
T Consensus 93 -~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 93 -QLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp -EEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred -cEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 4555555555888887655321 111111 12478899999 8987665432 36788888
Q ss_pred CCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCce--eeeeecccCCCcEEEEECCCCCEEE
Q 016257 183 TEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN--KIGHKRLLRKPASVLSISLDGKYLA 260 (392)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~ 260 (392)
..+++....... . .....++++|+++.+ .++....+.|.+|++.... ....+..... ...+++.++|++.+
T Consensus 172 ~~~~~~~~~~~~-~-~~p~gia~~~dg~~l----yv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~v 244 (322)
T 2fp8_A 172 PSTKETTLLLKE-L-HVPGGAEVSADSSFV----LVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWV 244 (322)
T ss_dssp TTTTEEEEEEEE-E-SCCCEEEECTTSSEE----EEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEE
T ss_pred CCCCEEEEeccC-C-ccCcceEECCCCCEE----EEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEE
Confidence 876654332221 1 135679999999852 2444567899999987421 1111111223 67899999998766
Q ss_pred EEeC----------CCcEEEEecCCceeeeeeecccc--CcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 261 MGSK----------DGDICVVDVKKMEINHWSKRLHL--GTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 261 ~~~~----------dg~i~iwd~~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
+... .+.|..+|.. ++....+..... -..++.+++ .+++++++....+.|..+++..
T Consensus 245 a~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 245 SSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred EecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 6544 4668888874 555554432210 134666766 4666666666778898888763
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.11 E-value=2e-08 Score=82.90 Aligned_cols=196 Identities=8% Similarity=-0.015 Sum_probs=134.4
Q ss_pred eeEEEEcCCCCeEEEEeC--CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCC
Q 016257 66 PMTIAVNPSGDDFVCSTT--NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWP 142 (392)
Q Consensus 66 v~~~~~sp~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~ 142 (392)
...+.|+|++.++++.+. ++.|.++|+.+++......... ......+++. ++.|+.+. .++.+.++|.+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~------~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD------SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT------TCCEEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC------CcceEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 579999998744444333 5789999999988665543211 1122345554 45555544 67899999999
Q ss_pred CCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCC-c---ceEEEEecCCCCcceEEEEE
Q 016257 143 SLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD-E---KIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 143 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~---~v~~~~~~~~~~~~~~~~~~ 218 (392)
+.+.+.++...... ...+++|++.++++..++.|.++|.++.+.+..+..... . .+..+.|. ++.. .+
T Consensus 95 t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l-----yv 166 (266)
T 2iwa_A 95 TLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV-----WA 166 (266)
T ss_dssp TTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE-----EE
T ss_pred CCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE-----EE
Confidence 99887766433111 233566788888777789999999999888888764321 1 35678888 5542 35
Q ss_pred EeCCccEEEEEeCCCceeeeeeccc-------------CCCcEEEEECCCCCEEE-EEeCCCcEEEEecCCce
Q 016257 219 QRGDKALLAVYDISTWNKIGHKRLL-------------RKPASVLSISLDGKYLA-MGSKDGDICVVDVKKME 277 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~ 277 (392)
....++.|.+.|..+++.+..+... ......++++|+++.++ ++...+++...++...+
T Consensus 167 n~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 167 NIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred ecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 5556789999999999887766532 13458999999987655 45567888888886543
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.11 E-value=8.7e-09 Score=93.71 Aligned_cols=186 Identities=11% Similarity=0.060 Sum_probs=131.3
Q ss_pred CCCEEEEEeC-CCcEEEEeCCCCceee--cccCCCCcEEEEEe-c-CCCCeEEEEc------------------CCCcEE
Q 016257 123 DGSRFAAGGV-DGHLRIMHWPSLRIIL--DEPKAHKSVLDMDF-S-LDSEFLATTS------------------TDGSAR 179 (392)
Q Consensus 123 ~~~~l~~~~~-dg~i~i~d~~~~~~~~--~~~~~~~~i~~i~~-~-~~~~~l~~~~------------------~d~~i~ 179 (392)
||++++.... ++.|.+.|+++.+... .+... .....+++ + |+++++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC-CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 7888877665 4569999999988765 33322 35778887 5 9999998884 245799
Q ss_pred EEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc------------------------------------
Q 016257 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK------------------------------------ 223 (392)
Q Consensus 180 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d------------------------------------ 223 (392)
+.|..+.+...++.... ....++++|+|++.|. ++...
T Consensus 179 vID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~v----t~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFS----TSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEETTTTEEEEEEEESS--CCCCEEECSSSSEEEE----EESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEECCCCeEEEEEEeCC--CccceEECCCCCEEEE----EecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 99999998888887543 3577889999987432 22111
Q ss_pred -cEEEEEeCCC--cee-eeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCce------------eeeeeeccc
Q 016257 224 -ALLAVYDIST--WNK-IGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKME------------INHWSKRLH 286 (392)
Q Consensus 224 -~~i~v~d~~~--~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~------------~~~~~~~~~ 286 (392)
+.|.+.|.++ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+ ....+.
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--- 328 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--- 328 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB---
T ss_pred ECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC---
Confidence 2366777776 333 223322 23456799999999877766 57889999999763 222222
Q ss_pred cCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 287 LGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 287 ~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
.......++|+|+|...++.-.|+.|..|++..
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 156789999999995555666799999999976
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.10 E-value=3.5e-08 Score=80.40 Aligned_cols=183 Identities=9% Similarity=0.091 Sum_probs=127.6
Q ss_pred CeEEEEecCCCCEEEEEeCCC--cEEEEeCCCCceeecccCCCCc-EEEEEecCCCCeEEE-EcCCCcEEEEECCCCeee
Q 016257 114 PQKCLSFSVDGSRFAAGGVDG--HLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLAT-TSTDGSARIWKTEDGVAW 189 (392)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~-i~~i~~~~~~~~l~~-~~~d~~i~vwd~~~~~~~ 189 (392)
....+.|+ ++.+..+.+.+| .|+++|+++++......-.... -..++.. ++.|.. .-.++.+.++|.++.+.+
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEE
Confidence 45788998 666666666665 8999999999987766443321 1234443 445544 446789999999999999
Q ss_pred EEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC-----CCcEEEEECCCCCEEEEEeC
Q 016257 190 TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMGSK 264 (392)
Q Consensus 190 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~ 264 (392)
.++..... ...+++++.. ++.+..++.|.++|..+.+.+..+.... ..++.+.|. +|+..+..-.
T Consensus 121 ~ti~~~~e----G~glt~dg~~-----L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 121 RSFNYDGE----GWGLTHNDQY-----LIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp EEEECSSC----CCCEEECSSC-----EEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred EEEECCCC----ceEEecCCCE-----EEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc
Confidence 99876432 2334466776 4555557899999999988776655421 334567776 6765555556
Q ss_pred CCcEEEEecCCceeeeeeeccc----------cCcceEEEEEeeCCCeEEEEeCC
Q 016257 265 DGDICVVDVKKMEINHWSKRLH----------LGTSIALVEFCPTQRVVLTASKE 309 (392)
Q Consensus 265 dg~i~iwd~~~~~~~~~~~~~~----------~~~~i~~~~~s~~~~~l~~~~~d 309 (392)
++.|.+.|.++++....+.... .....+.++|+|+++.|+..+..
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 8899999999999887774321 02356899999998877777754
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.09 E-value=2.9e-07 Score=77.16 Aligned_cols=230 Identities=7% Similarity=-0.112 Sum_probs=137.5
Q ss_pred CeEEEEeCCCeEEEEEEeCCccce----eeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCCCCceeecc
Q 016257 76 DDFVCSTTNGGCKLFEVYGGATDI----NLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRIILDE 150 (392)
Q Consensus 76 ~~l~~~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~ 150 (392)
++|+.+.. +.|+.+++....... ..... ....+..++|++++..|+.+. .++.|..+++.........
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~------~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHI------PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII 74 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEE------EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecC------CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE
Confidence 45565554 468888887654210 01100 113467899999766666554 5678999998765433222
Q ss_pred cCCCCcEEEEEecCCCCeEEE-EcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCC--ccEEE
Q 016257 151 PKAHKSVLDMDFSLDSEFLAT-TSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD--KALLA 227 (392)
Q Consensus 151 ~~~~~~i~~i~~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--d~~i~ 227 (392)
.........+++++++..|+. -...+.|.++++..... ..+..........++++|++..+| ++... .+.|.
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~ly----v~~~~~~~~~I~ 149 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLY----WTDWNRDNPKIE 149 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEE----EEECCSSSCEEE
T ss_pred ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEE----EEECCCCCcEEE
Confidence 222346789999997665554 45567899999864332 333222223578999999776532 22222 47888
Q ss_pred EEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEE
Q 016257 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTA 306 (392)
Q Consensus 228 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 306 (392)
.+++..................++++|++..|+.+. ..+.|.++|........... . ......++.. ++.++++.
T Consensus 150 ~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~--~~~P~gi~~d-~~~lyva~ 225 (267)
T 1npe_A 150 TSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-G--LQYPFAVTSY-GKNLYYTD 225 (267)
T ss_dssp EEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-C--CCSEEEEEEE-TTEEEEEE
T ss_pred EEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-C--CCCceEEEEe-CCEEEEEE
Confidence 888764322111112234578899999887766555 45789999998655443332 1 2344566654 34444444
Q ss_pred eCCCeEEEEEeecCc
Q 016257 307 SKEWGAMITKLTVPA 321 (392)
Q Consensus 307 ~~dg~i~iw~~~~~~ 321 (392)
...+.|..++...++
T Consensus 226 ~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 226 WKTNSVIAMDLAISK 240 (267)
T ss_dssp TTTTEEEEEETTTTE
T ss_pred CCCCeEEEEeCCCCC
Confidence 456788888776443
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.07 E-value=4.5e-08 Score=79.77 Aligned_cols=182 Identities=14% Similarity=0.093 Sum_probs=126.4
Q ss_pred CCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcE--EEEEecCCCCeEEEEcCCCcEEEEECCCCeeeE
Q 016257 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSV--LDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT 190 (392)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i--~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 190 (392)
.....+.|+ ++.+..+.+.+|.|+++|+++++..... - .... ..+++.. ++..+..-.++.+.+||.++.+.+.
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEE
Confidence 345788887 4556667777889999999999987766 2 2233 3355543 2344445578899999999999999
Q ss_pred EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC-----CCcEEEEECCCCCEEEEEeCC
Q 016257 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMGSKD 265 (392)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~d 265 (392)
++.....+ ..++ +++.. ++.+..++.|.++|..+.+.+..+.... ..++.+.|. +|+..+....+
T Consensus 131 ti~~~~eG--wGLt--~Dg~~-----L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s 200 (268)
T 3nok_A 131 TTRYSGEG--WGLC--YWNGK-----LVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHS 200 (268)
T ss_dssp EEECSSCC--CCEE--EETTE-----EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTC
T ss_pred EEeCCCce--eEEe--cCCCE-----EEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCC
Confidence 98764332 3333 56765 4555568899999999988876665422 244667776 77655555467
Q ss_pred CcEEEEecCCceeeeeeecc-----------ccCcceEEEEEeeCCCeEEEEeC
Q 016257 266 GDICVVDVKKMEINHWSKRL-----------HLGTSIALVEFCPTQRVVLTASK 308 (392)
Q Consensus 266 g~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~~~ 308 (392)
+.|.+.|.++++.+..+... ....-.+.++++|+++.|+..+.
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 89999999999988776432 01246789999998776666554
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.06 E-value=1.4e-06 Score=84.83 Aligned_cols=243 Identities=11% Similarity=0.053 Sum_probs=154.6
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 142 (392)
...|.++...+++.+.+....+| +..|+..+.+.............-....|.++...++|.+.+ |+.+ -|.+|+..
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAG-LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSC-EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEEEECCCC-eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCC
Confidence 46788888888776554433445 888887655422111110000011235799999988886554 4555 58899987
Q ss_pred CCceeeccc-------CCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEec------CCCcceEEEEecCCC
Q 016257 143 SLRIILDEP-------KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR------NSDEKIELCRFSKDG 209 (392)
Q Consensus 143 ~~~~~~~~~-------~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~ 209 (392)
+++...... -....|.++...++|. |..|+.++-|..++...+... .+.. -....|.++...+++
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g 368 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDK 368 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTS
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCC
Confidence 765432211 1224699999999887 445666677899987654332 2211 123368999998888
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCceeeeeec--------ccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeee
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKR--------LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHW 281 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 281 (392)
. +..++.++-|..||..+++...... .....|.++...++|+.|.+|+.++-|.+||.++++....
T Consensus 369 ~------lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 369 N------LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp C------EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred C------EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence 7 5777777779999988755432211 1235788999888888677778777799999988765443
Q ss_pred eec---cccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 282 SKR---LHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 282 ~~~---~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
... .. ...|.++...++|.+.+.. . +.+.+++...
T Consensus 443 ~~~~~~l~-~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~ 480 (795)
T 4a2l_A 443 NQRNSQLV-NENVYAILPDGEGNLWLGT-L-SALVRFNPEQ 480 (795)
T ss_dssp CTTTSCCS-CSCEEEEEECSSSCEEEEE-S-SCEEEEETTT
T ss_pred ecCCCCcC-CCeeEEEEECCCCCEEEEe-c-CceeEEeCCC
Confidence 210 12 4578999988888755544 4 4577777543
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=1.9e-08 Score=95.62 Aligned_cols=294 Identities=11% Similarity=0.055 Sum_probs=175.1
Q ss_pred CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCC--CC-CCe-EEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecc
Q 016257 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQ--DA-GPQ-KCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE 150 (392)
Q Consensus 75 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~--~~-~~v-~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 150 (392)
+..|++++.++.|.-+|..+++...+.......... .. ..+ ..+++ .+..+++++.|+.|..+|.++++.+.+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 456777778888999998888766555322110000 00 000 11222 3557888889999999999999987655
Q ss_pred cCCCC-cEEEEEecC--CCCeEEEEcC------CCcEEEEECCCCeeeEEEecCCCc-----------------------
Q 016257 151 PKAHK-SVLDMDFSL--DSEFLATTST------DGSARIWKTEDGVAWTFLTRNSDE----------------------- 198 (392)
Q Consensus 151 ~~~~~-~i~~i~~~~--~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~----------------------- 198 (392)
..... ....+.-+| .+..++++.. ++.|+.+|.++++.+-.+......
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 43211 001111112 1345555543 589999999999988777531100
Q ss_pred -------ceEEEEecCCCCcceEEEEEEeCCcc-------------------EEEEEeCCCceeeeeeccc--C------
Q 016257 199 -------KIELCRFSKDGTKPFLFCTVQRGDKA-------------------LLAVYDISTWNKIGHKRLL--R------ 244 (392)
Q Consensus 199 -------~v~~~~~~~~~~~~~~~~~~~~~~d~-------------------~i~v~d~~~~~~~~~~~~~--~------ 244 (392)
....++++|+... ++.+..++ .|..+|.++++.+-.+... .
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~-----vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~ 298 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDL-----LYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTA 298 (668)
T ss_dssp HHCEECCCCSCEEEETTTTE-----EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred eeCCCCccccceEEcCCCCE-----EEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccC
Confidence 0123677777665 44444444 4999999999887555432 1
Q ss_pred -CCcEEEEECCCCC---EEEEEeCCCcEEEEecCCceeeeeeeccc----------cCcce-------------------
Q 016257 245 -KPASVLSISLDGK---YLAMGSKDGDICVVDVKKMEINHWSKRLH----------LGTSI------------------- 291 (392)
Q Consensus 245 -~~v~~~~~s~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~i------------------- 291 (392)
.+.....+..+|+ .++.++.+|.++++|..+++.+....... ...++
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~ 378 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPF 378 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTT
T ss_pred CCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCc
Confidence 2222233334665 68899999999999999999773321110 00000
Q ss_pred -----EEEEEeeCCCeEEEEe------------------------------------CCCeEEEEEeecCccccceeeee
Q 016257 292 -----ALVEFCPTQRVVLTAS------------------------------------KEWGAMITKLTVPADWKEWQIYS 330 (392)
Q Consensus 292 -----~~~~~s~~~~~l~~~~------------------------------------~dg~i~iw~~~~~~~~~~~~~~~ 330 (392)
..++++|+...++... .+|.|..||+.+++. .|....
T Consensus 379 G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~--~W~~~~ 456 (668)
T 1kv9_A 379 GAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA--AWKVPY 456 (668)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE--EEEEEE
T ss_pred cccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE--EEEccC
Confidence 1267888766555421 237788888876543 454322
Q ss_pred e--e--eeeeeeceEEEEeeecceeeeecccccccccCCCCcccccCCCCC
Q 016257 331 L--L--LALFLASAVVFYIFFENSDSFWNFPVARNQHGGPKIESILRDPQS 377 (392)
Q Consensus 331 ~--~--~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p~~~~~~~~~~~ 377 (392)
. . .....+.+.++++..|+.++.||..+|+.+........+...|..
T Consensus 457 ~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~ 507 (668)
T 1kv9_A 457 PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMT 507 (668)
T ss_dssp SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceE
Confidence 1 1 123345668888889999999999999877655443444444443
No 248
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.04 E-value=2.2e-07 Score=75.05 Aligned_cols=194 Identities=12% Similarity=0.141 Sum_probs=130.0
Q ss_pred CCCeEEEEecCCCCEEEEEeCC--CcEEEEeCCCCceeecccCCCCc-EEEEEecCCCCeEEEEcCCCcEEEEECCCCee
Q 016257 112 AGPQKCLSFSVDGSRFAAGGVD--GHLRIMHWPSLRIILDEPKAHKS-VLDMDFSLDSEFLATTSTDGSARIWKTEDGVA 188 (392)
Q Consensus 112 ~~~v~~~~~s~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~-i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 188 (392)
......+.|+. +.+..+.+.+ ..|+.+|+++++......-.... -..++... ++.....-.++.+.++|.++.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcE
Confidence 35677899986 5455555554 48999999999987765433321 13344442 33444455789999999999999
Q ss_pred eEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC-----CCcEEEEECCCCCEEEEEe
Q 016257 189 WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR-----KPASVLSISLDGKYLAMGS 263 (392)
Q Consensus 189 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~ 263 (392)
+.++.....+ ..+ .+++.. ++.+..++.|.++|..+.+.+..+.... ..++.+.+. +|+..+...
T Consensus 98 ~~ti~~~~~G--wgl--t~dg~~-----L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw 167 (243)
T 3mbr_X 98 RARFRYPGEG--WAL--TSDDSH-----LYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW 167 (243)
T ss_dssp EEEEECSSCC--CEE--EECSSC-----EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred EEEEeCCCCc--eEE--eeCCCE-----EEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC
Confidence 9998865432 344 456666 4555568899999999988776665422 345566765 666555555
Q ss_pred CCCcEEEEecCCceeeeeeecc-----------ccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 264 KDGDICVVDVKKMEINHWSKRL-----------HLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 264 ~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
.+..|.+.|.++++....+... ....-.+.++++|+++.|+..+.-- =++|.++
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w-p~~~~v~ 232 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW-PMLYEIR 232 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC-SEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC-CcEEEEE
Confidence 6789999999999988776422 1124678999999888776666531 2444444
No 249
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.01 E-value=7.2e-07 Score=76.32 Aligned_cols=228 Identities=11% Similarity=0.013 Sum_probs=138.4
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCC--cEEEEeC
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG--HLRIMHW 141 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~i~d~ 141 (392)
.....++|+++++++++-..++.|..||..... . .... .......+++.++|+++++..... .|..++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~-~~~~-------~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q-IHAT-------VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E-EEEE-------CSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-E-EEEe-------CCCCceeEEEcCCCcEEEEeccCCcceEEEEcC
Confidence 568899999999866665578888888865432 1 1111 123678999999998665544322 4667777
Q ss_pred CCCceeeccc-CCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCee-eEEEec--------CCCcceEEEEecCCCCc
Q 016257 142 PSLRIILDEP-KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA-WTFLTR--------NSDEKIELCRFSKDGTK 211 (392)
Q Consensus 142 ~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~--------~~~~~v~~~~~~~~~~~ 211 (392)
.+++...... ........++..+++..+++-..++.|+++|...++. +..... ..-.....+ +|++..
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNF 180 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCE
Confidence 7776432211 1112334555555555455555678899999875432 111100 011124455 788875
Q ss_pred ceEEEEEEeCCccEEEEEeCCC-cee--eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeee--eeeccc
Q 016257 212 PFLFCTVQRGDKALLAVYDIST-WNK--IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINH--WSKRLH 286 (392)
Q Consensus 212 ~~~~~~~~~~~d~~i~v~d~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~ 286 (392)
+ .++....+.|..+|+.. ++. ...+.. ......++++++|++.++....+.|.++|.. ++... .+ ...
T Consensus 181 l----yv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~-~~~ 253 (306)
T 2p4o_A 181 L----YVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA-EQG 253 (306)
T ss_dssp E----EEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECG-GGT
T ss_pred E----EEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeec-ccc
Confidence 3 35666778999999874 321 111111 1345568999999887777777899999975 54422 22 111
Q ss_pred cCcceEEEEEe---eCCCeEEEEeCCC
Q 016257 287 LGTSIALVEFC---PTQRVVLTASKEW 310 (392)
Q Consensus 287 ~~~~i~~~~~s---~~~~~l~~~~~dg 310 (392)
....++++|. |+++.|+.++..+
T Consensus 254 -~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 254 -VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp -CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -cCCceEEEEecccCCCCEEEEECCCC
Confidence 3568999998 8877776666543
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.97 E-value=1.1e-07 Score=77.57 Aligned_cols=185 Identities=11% Similarity=0.034 Sum_probs=125.1
Q ss_pred CCCCe--eEEEEcCCCCeEEEEeCCC--eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcE
Q 016257 62 SEGDP--MTIAVNPSGDDFVCSTTNG--GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHL 136 (392)
Q Consensus 62 h~~~v--~~~~~sp~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i 136 (392)
|.... ..+.|+ ++.++.+.+.+| .|+++|+.+++........ .........++++.|+... .++.+
T Consensus 39 hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--------~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 39 HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--------KRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--------TTCCEEEEEEETTEEEEEESSSSEE
T ss_pred CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC--------CccceeEEEEeCCEEEEEEeeCCEE
Confidence 44444 788898 666666666665 8999999999866555321 1233322333455555544 58899
Q ss_pred EEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCC-C---cceEEEEecCCCCcc
Q 016257 137 RIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS-D---EKIELCRFSKDGTKP 212 (392)
Q Consensus 137 ~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~~~ 212 (392)
.+||.++.+.+.++.-.... ..+++|++.|+.+..++.|.++|..+.+.+.++.... . ..+..+.|. +|..
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~l- 184 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEI- 184 (262)
T ss_dssp EEEETTTCCEEEEEECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEE-
T ss_pred EEEECccCcEEEEEECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEE-
Confidence 99999999988766543322 2334567777777767889999999998888876432 1 124457776 5542
Q ss_pred eEEEEEEeCCccEEEEEeCCCceeeeeeccc------------CCCcEEEEECCCCCEEEEEeC
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNKIGHKRLL------------RKPASVLSISLDGKYLAMGSK 264 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~------------~~~v~~~~~s~~~~~l~~~~~ 264 (392)
.+..-.++.|.+.|.++++.+..+... ..-.+.++++|+++.|++.+.
T Consensus 185 ----yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 185 ----FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ----EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ----EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 355556889999999999887665432 134588999999888777764
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.97 E-value=5.6e-07 Score=83.84 Aligned_cols=294 Identities=10% Similarity=0.007 Sum_probs=171.2
Q ss_pred CCeEEEEeC-CCeEEEEEE-eCCccceeeccccCCCC----CCCCCeEEEEecCCCCE----EEEEeCCCcEEEEeCCCC
Q 016257 75 GDDFVCSTT-NGGCKLFEV-YGGATDINLLAKKMPPL----QDAGPQKCLSFSVDGSR----FAAGGVDGHLRIMHWPSL 144 (392)
Q Consensus 75 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~----l~~~~~dg~i~i~d~~~~ 144 (392)
+..|++++. ++.|.-+|. .+++...+......... ........++++|.+.. +++++.|+.+..+|.+++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 445666666 777888888 77776655432211000 00001123455443444 888889999999999999
Q ss_pred ceeecccCCCC----cEEE-EEecCCCCeEEEEc------CCCcEEEEECCCCeeeEEEecCCCcc--------------
Q 016257 145 RIILDEPKAHK----SVLD-MDFSLDSEFLATTS------TDGSARIWKTEDGVAWTFLTRNSDEK-------------- 199 (392)
Q Consensus 145 ~~~~~~~~~~~----~i~~-i~~~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~-------------- 199 (392)
+.+.+...... .+.+ .... ++ .+++++ .++.|+.+|.++++.+-.+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 98765432210 1111 1111 33 455554 37999999999999887765432110
Q ss_pred ----------------------e-EEEEecCCCCcceEEEEEEeCCc----------------cEEEEEeCCCceeeeee
Q 016257 200 ----------------------I-ELCRFSKDGTKPFLFCTVQRGDK----------------ALLAVYDISTWNKIGHK 240 (392)
Q Consensus 200 ----------------------v-~~~~~~~~~~~~~~~~~~~~~~d----------------~~i~v~d~~~~~~~~~~ 240 (392)
+ ..+++.++... ++.+..+ +.|.-+|.++++.+-.+
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~-----vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~ 294 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNL-----IYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY 294 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTE-----EEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCE-----EEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe
Confidence 0 12345555554 2333222 48999999999887554
Q ss_pred cccCC---------CcEEEEEC-CCC---CEEEEEeCCCcEEEEecCCceeeeeeeccc-----------cCcce-----
Q 016257 241 RLLRK---------PASVLSIS-LDG---KYLAMGSKDGDICVVDVKKMEINHWSKRLH-----------LGTSI----- 291 (392)
Q Consensus 241 ~~~~~---------~v~~~~~s-~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~i----- 291 (392)
+.... ...-+... .+| +.++.++.+|.++++|.++++.+....... ...++
T Consensus 295 q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~ 374 (599)
T 1w6s_A 295 QKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEY 374 (599)
T ss_dssp ESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGG
T ss_pred ecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeecccc
Confidence 43221 11112222 567 567778899999999999998765443111 00111
Q ss_pred ---------------------EEEEEeeCCCeEEEEe---------------------------------------CCCe
Q 016257 292 ---------------------ALVEFCPTQRVVLTAS---------------------------------------KEWG 311 (392)
Q Consensus 292 ---------------------~~~~~s~~~~~l~~~~---------------------------------------~dg~ 311 (392)
..++++|+..++++.. .+|.
T Consensus 375 ~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~ 454 (599)
T 1w6s_A 375 GTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQ 454 (599)
T ss_dssp CCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEE
T ss_pred CCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCe
Confidence 2456777766555432 2356
Q ss_pred EEEEEeecCccccceeeeee---eee-eeeeceEEEEeeecceeeeecccccccccCCCCcccccCCCCC
Q 016257 312 AMITKLTVPADWKEWQIYSL---LLA-LFLASAVVFYIFFENSDSFWNFPVARNQHGGPKIESILRDPQS 377 (392)
Q Consensus 312 i~iw~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p~~~~~~~~~~~ 377 (392)
+..||+.+++. .|+.... ..+ ...+.+.++.+..|+.++.+|..+|+.+........+...|..
T Consensus 455 l~A~D~~tG~~--~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~ 522 (599)
T 1w6s_A 455 IKAYNAITGDY--KWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMT 522 (599)
T ss_dssp EEEECTTTCCE--EEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred EEEEECCCCCE--EeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEE
Confidence 77777665543 4544221 111 2335678888889999999999999987665444444544544
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.97 E-value=1.9e-07 Score=86.88 Aligned_cols=296 Identities=10% Similarity=0.070 Sum_probs=169.9
Q ss_pred CCeEEEEeC-CCeEEEEEE-eCCccceeeccccCCCCC----CCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceee
Q 016257 75 GDDFVCSTT-NGGCKLFEV-YGGATDINLLAKKMPPLQ----DAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIIL 148 (392)
Q Consensus 75 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 148 (392)
+..+++++. ++.|.-+|. .+++...+.......... .......++. ++..+++++.|+.+..+|.++++.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 445666666 778888888 787765554322100000 0000011222 35578888889999999999999876
Q ss_pred cccCCCC-cEEEEEecC--CCCeEEEEcC------CCcEEEEECCCCeeeEEEecCCCc---------------------
Q 016257 149 DEPKAHK-SVLDMDFSL--DSEFLATTST------DGSARIWKTEDGVAWTFLTRNSDE--------------------- 198 (392)
Q Consensus 149 ~~~~~~~-~i~~i~~~~--~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~--------------------- 198 (392)
+...... .-..+.-+| .+..+++++. ++.|+.+|.++++.+-++......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~ 219 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGL 219 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSH
T ss_pred EecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccc
Confidence 5432210 000111112 1345565554 789999999999988776543211
Q ss_pred ----------------ceEEEEecCCCCcceEEEEEEeC----------Cc----cEEEEEeCCCceeeeeecccC----
Q 016257 199 ----------------KIELCRFSKDGTKPFLFCTVQRG----------DK----ALLAVYDISTWNKIGHKRLLR---- 244 (392)
Q Consensus 199 ----------------~v~~~~~~~~~~~~~~~~~~~~~----------~d----~~i~v~d~~~~~~~~~~~~~~---- 244 (392)
....+++.++...+| +.++. .+ +.|..+|.++++.+-.++...
T Consensus 220 g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy---~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 220 GTKTWEGDAWKIGGGTNWGWYAYDPKLNLFY---YGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp HHHTSSTTGGGGCCCCCCSCCEEETTTTEEE---EECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred ccccCcccceecCCCCeeeeEEEcCCCCeEE---EECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 001245555544421 12221 11 369999999998875544221
Q ss_pred -----CCcEEEEECCCCC---EEEEEeCCCcEEEEecCCceeeeeeecccc-----------Ccce--------------
Q 016257 245 -----KPASVLSISLDGK---YLAMGSKDGDICVVDVKKMEINHWSKRLHL-----------GTSI-------------- 291 (392)
Q Consensus 245 -----~~v~~~~~s~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~i-------------- 291 (392)
....-+...++|+ .++.++.+|.++++|..+++.+........ ..++
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 1111122234674 577888999999999999987655432110 0111
Q ss_pred ------------EEEEEeeCCCeEEEEe-------------------------------------CCCeEEEEEeecCcc
Q 016257 292 ------------ALVEFCPTQRVVLTAS-------------------------------------KEWGAMITKLTVPAD 322 (392)
Q Consensus 292 ------------~~~~~s~~~~~l~~~~-------------------------------------~dg~i~iw~~~~~~~ 322 (392)
..++++|+..+++... .+|.+..+|+..++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 2467888877766654 246777777765543
Q ss_pred ccceeeeee--eee--eeeeceEEEEeeecceeeeecccccccccCCCCcccccCCCCC
Q 016257 323 WKEWQIYSL--LLA--LFLASAVVFYIFFENSDSFWNFPVARNQHGGPKIESILRDPQS 377 (392)
Q Consensus 323 ~~~~~~~~~--~~~--~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p~~~~~~~~~~~ 377 (392)
.|..... ..+ ...+...++.+..|+.++.+|..+|+.+........+...+..
T Consensus 457 --~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~ 513 (571)
T 2ad6_A 457 --KWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMT 513 (571)
T ss_dssp --EEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred --EEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEE
Confidence 4443221 111 1223567778888999999999999987655544444444444
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.96 E-value=1.3e-05 Score=78.21 Aligned_cols=244 Identities=9% Similarity=0.021 Sum_probs=153.7
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 142 (392)
...|.++...++|.+.+ |+.+| |.+|+..+...............-....|.++...++|. |-.|+.++-|..++..
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 35699999988886544 44556 888887655422111110001111246799999999886 4556777778899876
Q ss_pred CCceeeccc------CCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEec-------CCCcceEEEEecCCC
Q 016257 143 SLRIILDEP------KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR-------NSDEKIELCRFSKDG 209 (392)
Q Consensus 143 ~~~~~~~~~------~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~ 209 (392)
+........ .....|.++...++|+ |..|+.++-|..|+..+++....... -....|.++...+++
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred cccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 543221111 1234699999988876 44567777799999876654332211 113468899988888
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCceeeeeec----ccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec-
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKR----LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR- 284 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~- 284 (392)
.. +..++.++-|..||.++++...... .....|.++...++|.+.+.. .+ -|.+||.++++.......
T Consensus 418 ~~-----lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~ 490 (795)
T 4a2l_A 418 SL-----VYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTTIEKEK 490 (795)
T ss_dssp TE-----EEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEECCBCT
T ss_pred CE-----EEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEEccccc
Confidence 72 2555666669999988765432221 224578899988888765544 44 499999888765443211
Q ss_pred ---cccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 285 ---LHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 285 ---~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
......|.++...++|.+.+... +.+..|+...
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~ 526 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEG 526 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEET
T ss_pred cccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCC
Confidence 11135789999988888665544 5677777654
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=2.3e-07 Score=88.16 Aligned_cols=238 Identities=13% Similarity=0.102 Sum_probs=152.3
Q ss_pred CCeEEEEeCCCeEEEEEEeCCccceeeccccCC-CCCCC-CCeEEEEecCCCCEEEEEeC------CCcEEEEeCCCCce
Q 016257 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMP-PLQDA-GPQKCLSFSVDGSRFAAGGV------DGHLRIMHWPSLRI 146 (392)
Q Consensus 75 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-~~~~~-~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~ 146 (392)
+..+++++.|+.|..+|..+++...+....... ..... .++ . .+..++++.. +|.|+.+|.++++.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~----v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR----V--VKGKVIIGNGGAEYGVRGFVSAYDADTGKL 190 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE----E--ETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE----E--ECCEEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence 457888888999999999999876665432110 00001 111 1 1335555543 58899999999998
Q ss_pred eecccCCC-------------------------------CcEEEEEecCCCCeEEEEcCCC-------------------
Q 016257 147 ILDEPKAH-------------------------------KSVLDMDFSLDSEFLATTSTDG------------------- 176 (392)
Q Consensus 147 ~~~~~~~~-------------------------------~~i~~i~~~~~~~~l~~~~~d~------------------- 176 (392)
+.++.... .....++++|+...++.++.++
T Consensus 191 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 191 AWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 76543210 0112468888888888887765
Q ss_pred cEEEEECCCCeeeEEEecCC-C-------cceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC----
Q 016257 177 SARIWKTEDGVAWTFLTRNS-D-------EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR---- 244 (392)
Q Consensus 177 ~i~vwd~~~~~~~~~~~~~~-~-------~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~---- 244 (392)
.|..+|.++++.+-.++..+ . .+.....+..+++.. -.++.++.+|.++++|.++++.+.......
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~--~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 348 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPR--KVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWA 348 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEE--EEEEECCTTSEEEEEETTTCCEEEEEESSCCCSE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEE--EEEEEECCCCEEEEEECCCCCEeccccccccccc
Confidence 39999999999888776431 1 122222333355411 126788899999999999998763322111
Q ss_pred --------CC------------------------cEEEEECCCCCEEEEEe-----------------------------
Q 016257 245 --------KP------------------------ASVLSISLDGKYLAMGS----------------------------- 263 (392)
Q Consensus 245 --------~~------------------------v~~~~~s~~~~~l~~~~----------------------------- 263 (392)
.+ -..++++|+...+++..
T Consensus 349 ~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (668)
T 1kv9_A 349 EKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADA 428 (668)
T ss_dssp EEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGC
T ss_pred cccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCcccccc
Confidence 00 01267788777766421
Q ss_pred -------CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccc
Q 016257 264 -------KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 264 -------~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
.+|.|..||+.+++..-.... ..+.....+...+.+++.++.|+.++.||...++.+
T Consensus 429 ~~~p~~~~~g~l~A~D~~tG~~~W~~~~---~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 429 TDVPAAVVSGALLAWDPVKQKAAWKVPY---PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCCCGGGCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCCCCCccceEEEEeCCCCcEEEEccC---CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 237899999999998765532 233444455667888999999999999998866553
No 255
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.89 E-value=1e-06 Score=83.79 Aligned_cols=284 Identities=11% Similarity=0.013 Sum_probs=153.7
Q ss_pred eecCCC-CCcceeEEEeCCCCCC---CCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC-
Q 016257 9 CGSWIK-RPENVNLVVLGKSSRA---SSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT- 83 (392)
Q Consensus 9 ~~~w~~-~~~~~~~~~~g~~~~~---~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~- 83 (392)
++++.+ ++ .+++.|+.... ....+.-.++.+++.+..... ... .-..+.....++++.++++.++.|+.
T Consensus 190 ~~av~~~~g---~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~--~~~-~~~~~~~~~~~~~~~~~g~lyv~GG~~ 263 (656)
T 1k3i_A 190 AAAIEPTSG---RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD--RTV-TVTKHDMFCPGISMDGNGQIVVTGGND 263 (656)
T ss_dssp EEEEETTTT---EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC--CEE-EECSCCCSSCEEEECTTSCEEEECSSS
T ss_pred eEEEEecCC---EEEEEecccccccccCCCCeEEEEEEeCCCCcEEe--Ccc-cCCCCCCccccccCCCCCCEEEeCCCC
Confidence 344555 44 46666654321 111233467778877655432 211 11223344556788889999999884
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CC-----CcEEEEeCCCCceeecccC----C
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VD-----GHLRIMHWPSLRIILDEPK----A 153 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~~~~----~ 153 (392)
+..+.+||..+.+.... ..+.....-.+++..++++.++.|+ .+ ..+.+||..+.+....... .
T Consensus 264 ~~~v~~yd~~t~~W~~~------~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~ 337 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPG------PDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPM 337 (656)
T ss_dssp TTCEEEEEGGGTEEEEC------CCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGG
T ss_pred CCceEEecCcCCceeEC------CCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccc
Confidence 45799999876643211 1111222224556667899988888 34 5699999987664321000 0
Q ss_pred CCcEEEEEecCCCCeEEEEcCCC---------cEEEEECCCCeeeEEEecCC--------CcceEEEEecCCCCcceEEE
Q 016257 154 HKSVLDMDFSLDSEFLATTSTDG---------SARIWKTEDGVAWTFLTRNS--------DEKIELCRFSKDGTKPFLFC 216 (392)
Q Consensus 154 ~~~i~~i~~~~~~~~l~~~~~d~---------~i~vwd~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~~~~ 216 (392)
...-....+..++..++.++.+| .+..||..+........... ...-.++.|...+..+
T Consensus 338 ~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i---- 413 (656)
T 1k3i_A 338 LTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKI---- 413 (656)
T ss_dssp CCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEE----
T ss_pred ccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeE----
Confidence 00000012234555555665443 46788887765443322111 0112344444433332
Q ss_pred EEEeCCcc-----------EEEEEeCCCceeeeee--cccC-CCcEEEEECCCCCEEEEEeCC-----------CcEEEE
Q 016257 217 TVQRGDKA-----------LLAVYDISTWNKIGHK--RLLR-KPASVLSISLDGKYLAMGSKD-----------GDICVV 271 (392)
Q Consensus 217 ~~~~~~d~-----------~i~v~d~~~~~~~~~~--~~~~-~~v~~~~~s~~~~~l~~~~~d-----------g~i~iw 271 (392)
++.|+.++ .+.+||..+..-.... .... ..-.++...|+++++++|+.+ ..+.+|
T Consensus 414 ~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~y 493 (656)
T 1k3i_A 414 LTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIY 493 (656)
T ss_dssp EEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEE
T ss_pred EEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEE
Confidence 34555321 6888988765433221 1111 122355677899999999854 468999
Q ss_pred ecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeC
Q 016257 272 DVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASK 308 (392)
Q Consensus 272 d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 308 (392)
|..+.+..................+.|+|++++.|+.
T Consensus 494 dp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 494 VPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 9988764432211111233345566789999999985
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.88 E-value=9.9e-07 Score=82.14 Aligned_cols=237 Identities=10% Similarity=-0.004 Sum_probs=146.7
Q ss_pred CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC--CCCEEEEEeC------CCcEEEEeCCCCce
Q 016257 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV--DGSRFAAGGV------DGHLRIMHWPSLRI 146 (392)
Q Consensus 75 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~------dg~i~i~d~~~~~~ 146 (392)
+..+++++.|+.+..+|..+++...+....... ....+ .-+| .+..+++++. ++.|+.+|.++++.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~---~~~~~---~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPK---VGSTL---TQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGG---GTCBC---CSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCC---cccee---ccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 557888888999999999888876554321100 00011 1111 1335666654 78999999999987
Q ss_pred eecccCCCCc--------------------------------------EEEEEecCCCCeEEEEcCC-------------
Q 016257 147 ILDEPKAHKS--------------------------------------VLDMDFSLDSEFLATTSTD------------- 175 (392)
Q Consensus 147 ~~~~~~~~~~--------------------------------------i~~i~~~~~~~~l~~~~~d------------- 175 (392)
+.+....... ...+++.++...++.++.+
T Consensus 189 ~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 189 KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCc
Confidence 6544322110 0235667766677666532
Q ss_pred ---CcEEEEECCCCeeeEEEecCCCc--------ceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC
Q 016257 176 ---GSARIWKTEDGVAWTFLTRNSDE--------KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR 244 (392)
Q Consensus 176 ---~~i~vwd~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~ 244 (392)
+.|..+|.++++.+-.++..... ....+...++|+... .++.++.+|.++++|.++++.+.......
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~--~v~~~~~~G~l~~lD~~tG~~~w~~~~~~ 346 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTP--LLSHIDRNGILYTLNRENGNLIVAEKVDP 346 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEE--EEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEE--EEEEeCCCcEEEEEECCCCCEEeeecccC
Confidence 25999999999988777643210 111122224564111 14667889999999999998765443211
Q ss_pred -------------CCc--------------------------EEEEECCCCCEEEEEe----------------------
Q 016257 245 -------------KPA--------------------------SVLSISLDGKYLAMGS---------------------- 263 (392)
Q Consensus 245 -------------~~v--------------------------~~~~~s~~~~~l~~~~---------------------- 263 (392)
.++ ..++++|+..++++.+
T Consensus 347 ~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g 426 (571)
T 2ad6_A 347 AVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVG 426 (571)
T ss_dssp TCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred CccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccc
Confidence 011 2357888877777654
Q ss_pred ---------------CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCcc
Q 016257 264 ---------------KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPAD 322 (392)
Q Consensus 264 ---------------~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 322 (392)
.+|.|..||+.+++..-..... ..+....+...+..++.++.||.++.+|...++.
T Consensus 427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK---FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC---CCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 2478999999999876655322 2333333344566778899999999999887655
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.87 E-value=2.3e-06 Score=76.82 Aligned_cols=239 Identities=5% Similarity=-0.026 Sum_probs=140.9
Q ss_pred CeeEEEEcC-CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC-C----cEEE
Q 016257 65 DPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-G----HLRI 138 (392)
Q Consensus 65 ~v~~~~~sp-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g----~i~i 138 (392)
.+..++++| ++..|+++...+.|+.+|+...... .+.. .......++|++++++|+++... + .+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~-------~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYS-------GLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEEC-------CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEec-------CCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 578899998 4556666666577888887665422 2211 23467899999999967666542 2 2333
Q ss_pred EeCCCCcee--ecccCCCCcEEEEEecC-CCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 139 MHWPSLRII--LDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 139 ~d~~~~~~~--~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
++. .+... ..+. .......++++| ++.++++-..++.|..++...+................++|+|+++++
T Consensus 210 ~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l--- 284 (430)
T 3tc9_A 210 LTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA--- 284 (430)
T ss_dssp EEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE---
T ss_pred EeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE---
Confidence 443 22211 1111 123456788999 666666666778999999986654333332222357899999999853
Q ss_pred EEEEeCCccEEEEEeCCC--cee--eeeeccc---------------CCCcE-EEEEC--------CCCCEEEEEeCCCc
Q 016257 216 CTVQRGDKALLAVYDIST--WNK--IGHKRLL---------------RKPAS-VLSIS--------LDGKYLAMGSKDGD 267 (392)
Q Consensus 216 ~~~~~~~d~~i~v~d~~~--~~~--~~~~~~~---------------~~~v~-~~~~s--------~~~~~l~~~~~dg~ 267 (392)
.++....+.|..++... ++. +..+... -.... .++.. ++|.+.++-...+.
T Consensus 285 -yv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~ 363 (430)
T 3tc9_A 285 -YIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC 363 (430)
T ss_dssp -EEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE
T ss_pred -EEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE
Confidence 35566778899987653 211 1111110 01122 45553 34555555556678
Q ss_pred EEEEecCCceeeeeeec------c--c-------cCcceEEEEEeeC-CCeEEEEeCCCeEEEEEee
Q 016257 268 ICVVDVKKMEINHWSKR------L--H-------LGTSIALVEFCPT-QRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 268 i~iwd~~~~~~~~~~~~------~--~-------~~~~i~~~~~s~~-~~~l~~~~~dg~i~iw~~~ 318 (392)
|+.++ ..++....... + . .-.....++++|+ +.++++-...+.|+..+++
T Consensus 364 I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 364 IRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 99888 45555443321 0 0 0125789999994 6555555566777777653
No 258
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.86 E-value=4.2e-07 Score=87.73 Aligned_cols=199 Identities=8% Similarity=-0.011 Sum_probs=117.1
Q ss_pred CeEEEEec-CCCCEEEEEeC-CC----cEEEEeCCCC-ceeecccCCCCcEEEEEecCCCCeEEEEcCC-----CcEEEE
Q 016257 114 PQKCLSFS-VDGSRFAAGGV-DG----HLRIMHWPSL-RIILDEPKAHKSVLDMDFSLDSEFLATTSTD-----GSARIW 181 (392)
Q Consensus 114 ~v~~~~~s-~~~~~l~~~~~-dg----~i~i~d~~~~-~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-----~~i~vw 181 (392)
.+...+|| |||++|+.+.. +| .|+++|+.++ +.+.... ......+.|+||++.|+....| ..|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~--~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV--SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE--EEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc--cCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57889999 99998886543 23 4999999988 6321111 1123468899999988877654 258888
Q ss_pred ECCCCeee--EEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCce--e--eeeecccCCCcEEEEECCC
Q 016257 182 KTEDGVAW--TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN--K--IGHKRLLRKPASVLSISLD 255 (392)
Q Consensus 182 d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~--~--~~~~~~~~~~v~~~~~s~~ 255 (392)
++.++... ..+..........+.|+||++++++ .........|.++|+.++. . ............++.|+.+
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~--~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g 330 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCI--GSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGT 330 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEE--EEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEE--EecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeC
Confidence 88766422 2333222234568899999997432 2333456789999998752 2 2222223345555665444
Q ss_pred CCEEEEEeCC----CcEEEEecCCc-eeee-eeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 256 GKYLAMGSKD----GDICVVDVKKM-EINH-WSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 256 ~~~l~~~~~d----g~i~iwd~~~~-~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
+.+++....+ ..|..+|+.++ +... .+.... ...+..+.+. .+.++++...++..++|-+.
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~-~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSE-DVFMESIAVR-SNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCS-SEEEEEEEEC-SSEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCC-CcEEEEEEEE-CCEEEEEEEeCCEEEEEEEe
Confidence 4444444333 25677777652 3222 221111 2245555554 33456677778877777655
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.84 E-value=6.1e-07 Score=86.62 Aligned_cols=195 Identities=11% Similarity=0.029 Sum_probs=112.5
Q ss_pred CeeEEEEc-CCCCeEEEEeC-CC----eEEEEEEeCC-ccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC----
Q 016257 65 DPMTIAVN-PSGDDFVCSTT-NG----GCKLFEVYGG-ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD---- 133 (392)
Q Consensus 65 ~v~~~~~s-p~~~~l~~~~~-d~----~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---- 133 (392)
.+...+|| |||++||.+.. +| +|+++|+.++ +...... ......++|+|||+.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~---------~~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV---------SGTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE---------EEECSCCEECSSTTEEEEEEECTTCC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc---------cCceeeEEEecCCCEEEEEEECCCCC
Confidence 67889999 99998886543 22 4999998877 5211100 0113468899999988877665
Q ss_pred -CcEEEEeCCCCce--eeccc-CCCCcEEEEEecCCCCeEEEEcC---CCcEEEEECCCCe-ee--EEEecCCCcceEEE
Q 016257 134 -GHLRIMHWPSLRI--ILDEP-KAHKSVLDMDFSLDSEFLATTST---DGSARIWKTEDGV-AW--TFLTRNSDEKIELC 203 (392)
Q Consensus 134 -g~i~i~d~~~~~~--~~~~~-~~~~~i~~i~~~~~~~~l~~~~~---d~~i~vwd~~~~~-~~--~~~~~~~~~~v~~~ 203 (392)
..|+.+++.+++. ...+. ........+.|+|||++|+..+. ...|+++|+.++. .. ..+.........++
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 2588888876642 11111 22234667899999998876552 3468888987652 22 33433333344555
Q ss_pred EecCCCCcceEEEEEEeC---CccEEEEEeCCCceeeee-ecccCC--CcEEEEECCCCCEEEEEeCCCc--EEEEec
Q 016257 204 RFSKDGTKPFLFCTVQRG---DKALLAVYDISTWNKIGH-KRLLRK--PASVLSISLDGKYLAMGSKDGD--ICVVDV 273 (392)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~---~d~~i~v~d~~~~~~~~~-~~~~~~--~v~~~~~s~~~~~l~~~~~dg~--i~iwd~ 273 (392)
.|+. +..++ +.+.. ....|..+|+.+...... +..+.. .+..+.+. .+.++++...++. |.++|+
T Consensus 326 ~~~~-g~~l~---~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 326 QMHG-TSHLV---ILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEET-TTEEE---EEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eeee-CCEEE---EEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 5543 44422 22222 235788888875322122 222222 34455554 2344556666775 555665
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.84 E-value=2.1e-06 Score=80.02 Aligned_cols=296 Identities=10% Similarity=0.012 Sum_probs=168.1
Q ss_pred CeEEEEeCCCeEEEEEEeCCccceeeccccCCCCC--CCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCC
Q 016257 76 DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQ--DAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (392)
Q Consensus 76 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 153 (392)
..+++++.++.|.-+|..+++...+.......... .......+++ .+..++.++.|+.|..+|.++++.+.+....
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCC
Confidence 35555555444888888888876655432111000 0000011222 3557888889999999999999987654332
Q ss_pred CC----cEE-EEEecC---CCC-eEEEEc------CCCcEEEEECCCCeeeEEEecCCCc--------------------
Q 016257 154 HK----SVL-DMDFSL---DSE-FLATTS------TDGSARIWKTEDGVAWTFLTRNSDE-------------------- 198 (392)
Q Consensus 154 ~~----~i~-~i~~~~---~~~-~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~-------------------- 198 (392)
.. .+. ...... +++ .+++++ .++.|+.+|.++++.+-........
T Consensus 147 ~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w 226 (582)
T 1flg_A 147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSW 226 (582)
T ss_dssp CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTS
T ss_pred CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccC
Confidence 10 111 111111 233 566654 3789999999999887655421100
Q ss_pred --------------------ceEEEEecCCCCcceEEEEEEeC-----------C-------c----cEEEEEeCCCcee
Q 016257 199 --------------------KIELCRFSKDGTKPFLFCTVQRG-----------D-------K----ALLAVYDISTWNK 236 (392)
Q Consensus 199 --------------------~v~~~~~~~~~~~~~~~~~~~~~-----------~-------d----~~i~v~d~~~~~~ 236 (392)
.-..++++|+...+| +.++. . | +.|.-+|.++++.
T Consensus 227 ~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vy---v~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 227 PDDRNSPTGKVESWSHGGGAPWQSASFDAETNTII---VGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp CBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEE---EEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred CCccccccccccccccCCccccCCceEcCCCCEEE---EeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 001244555555422 22321 1 2 6899999999988
Q ss_pred eeeecc--cC-------CCcEEEEEC-CCCC---EEEEEeCCCcEEEEecCCceeeeeeecccc-----------Ccc--
Q 016257 237 IGHKRL--LR-------KPASVLSIS-LDGK---YLAMGSKDGDICVVDVKKMEINHWSKRLHL-----------GTS-- 290 (392)
Q Consensus 237 ~~~~~~--~~-------~~v~~~~~s-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~-- 290 (392)
+-.++. |. ....-+... .+|+ .++.++.+|.++++|.++++.+........ ..+
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 755533 21 111112222 4674 788899999999999999987654422110 000
Q ss_pred ------------------------------eEEEEEeeCCCeEEEEe---------------------------------
Q 016257 291 ------------------------------IALVEFCPTQRVVLTAS--------------------------------- 307 (392)
Q Consensus 291 ------------------------------i~~~~~s~~~~~l~~~~--------------------------------- 307 (392)
-..++++|+...+++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 01346666655554432
Q ss_pred CCCeEEEEEeecCccccceeeeeee----eeeeeeceEEEEeeecceeeeecccccccccCCCCcccccCCCCCc
Q 016257 308 KEWGAMITKLTVPADWKEWQIYSLL----LALFLASAVVFYIFFENSDSFWNFPVARNQHGGPKIESILRDPQSS 378 (392)
Q Consensus 308 ~dg~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~i~~W~~~~~~~~~~~p~~~~~~~~~~~~ 378 (392)
.+|.+..||+.+++. .|+..... .....+.+.++.+..|+.++.+|..+|+.+........+...|..+
T Consensus 464 ~~G~l~A~D~~tG~~--~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y 536 (582)
T 1flg_A 464 HVGSLRAMDPVSGKV--VWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITW 536 (582)
T ss_dssp CSEEEEEECTTTCCE--EEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred CcceEEEEECCCCCE--EEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEE
Confidence 256777787766543 45433211 1123346788888899999999999999886655544455555543
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=2.1e-05 Score=76.52 Aligned_cols=242 Identities=12% Similarity=0.038 Sum_probs=147.0
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 143 (392)
..|.++...+++.+.+ |+.+| +.+||..+.+..................|.++...++|. |..|+..+-|.+++..+
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~G-l~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSKG-LALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEE-EeCCc-HheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC
Confidence 5688998888886554 44555 888886654422111100000001245789999888885 55566645688899876
Q ss_pred Cceeeccc--------------CCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe--------cCCCcceE
Q 016257 144 LRIILDEP--------------KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT--------RNSDEKIE 201 (392)
Q Consensus 144 ~~~~~~~~--------------~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--------~~~~~~v~ 201 (392)
.+...... .....|.++...++|. |-.|+.++-|..++........... .-....|.
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 366 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS 366 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE
Confidence 54321111 1234699999998886 5556666778999887554322111 11234688
Q ss_pred EEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeee---cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCcee
Q 016257 202 LCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK---RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI 278 (392)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 278 (392)
++...+++. +..++.++-|..||..++...... ......|.++...++|.+.+ |+.++-|..+|.++++.
T Consensus 367 ~i~~d~~g~------lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 367 SVCDDGQGK------LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp EEEECTTSC------EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred EEEEcCCCC------EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 999888887 566665666888998765432211 12235688888888876554 66666699999888765
Q ss_pred eeeeec-cccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 279 NHWSKR-LHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 279 ~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
...... .. ...|.++...++|.+.+ |+. +.+..++...
T Consensus 440 ~~~~~~~~~-~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~ 478 (781)
T 3v9f_A 440 QIIELEKNE-LLDVRVFYEDKNKKIWI-GTH-AGVFVIDLAS 478 (781)
T ss_dssp EECCSTTTC-CCCEEEEEECTTSEEEE-EET-TEEEEEESSS
T ss_pred EEeccCCCC-CCeEEEEEECCCCCEEE-EEC-CceEEEeCCC
Confidence 443211 12 46799998888877554 444 5677777654
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.83 E-value=2.1e-05 Score=68.45 Aligned_cols=207 Identities=3% Similarity=-0.059 Sum_probs=126.6
Q ss_pred CCCeeEEEEcCCCCeEEEEe-CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEE-EEeCCCcEEEEe
Q 016257 63 EGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHLRIMH 140 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d 140 (392)
...+..++|++....|+.+. ..+.|..+++...... .+... .......+++.+.+..|+ +-...+.|.+.+
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~~~~------~~~~p~glavd~~~g~ly~~d~~~~~I~~~~ 144 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EVVST------GLESPGGLAVDWVHDKLYWTDSGTSRIEVAN 144 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECS------SCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce-EEEeC------CCCCccEEEEecCCCeEEEEcCCCCeEEEEc
Confidence 34588999998766666554 5677888887655422 11111 123457889987555554 444567899999
Q ss_pred CCCCceeecccCCCCcEEEEEecCCCCeEEEEc-CC-CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEE
Q 016257 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS-TD-GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d-~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
++...........-.....++++|.+..|+.+. .. +.|..+++.. .....+....-.....++++|++..+| +
T Consensus 145 ~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGla~d~~~~~lY----~ 219 (349)
T 3v64_C 145 LDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMY----W 219 (349)
T ss_dssp TTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEESCCSSCSCEEEEEEETTTTEEE----E
T ss_pred CCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCcceEEEeCCCCEEE----E
Confidence 875443322223334678999999666655544 34 6788888754 333333222233578999999887643 4
Q ss_pred EeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 219 QRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
+-...+.|..+|+..................+++ .++.+.++-...+.|..++..+++....+
T Consensus 220 aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 220 VDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 5566789999998754332222222345567777 34445555556677888886666655444
No 263
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.82 E-value=3.2e-05 Score=66.34 Aligned_cols=230 Identities=8% Similarity=-0.084 Sum_probs=135.4
Q ss_pred eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCCC----Cceeeccc
Q 016257 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPS----LRIILDEP 151 (392)
Q Consensus 77 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~----~~~~~~~~ 151 (392)
+|+.+..+ .|+..++...+...... .......++|++++..|+.+. .++.|..+++.. ........
T Consensus 3 ~ll~~~~~-~I~~i~~~~~~~~~~~~--------~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 3 YLFFTNRH-EVRKMTLDRSEYTSLIP--------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp EEEEECBS-SEEEEETTSCCCEEEEC--------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred EEEEECCC-eEEEEECCCcceEehhc--------CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe
Confidence 45555444 48888877654322111 234678999998766665554 468899999875 22111122
Q ss_pred CCCCcEEEEEecCCCCeE-EEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCC-ccEEEEE
Q 016257 152 KAHKSVLDMDFSLDSEFL-ATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD-KALLAVY 229 (392)
Q Consensus 152 ~~~~~i~~i~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-d~~i~v~ 229 (392)
..-.....+++++.+..| ++-...+.|.++++..... ..+..........++++|.+..+| .+... .+.|...
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly----~~d~~~~~~I~~~ 148 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMY----WTDWGTPAKIKKG 148 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEE----EEECSSSCEEEEE
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEE----EEccCCCCeEEEE
Confidence 222356788998755544 4546678899999865433 333322223578999999777533 23323 3789998
Q ss_pred eCCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeC
Q 016257 230 DISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASK 308 (392)
Q Consensus 230 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 308 (392)
++............-.....++++|++..|+.+. ..+.|..+|+....................+++. .+.++++-..
T Consensus 149 ~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~ 227 (316)
T 1ijq_A 149 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDII 227 (316)
T ss_dssp ETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETT
T ss_pred cCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECC
Confidence 8864332211222234677999999877776655 4578999998754333222211112346778885 4555556656
Q ss_pred CCeEEEEEeecCc
Q 016257 309 EWGAMITKLTVPA 321 (392)
Q Consensus 309 dg~i~iw~~~~~~ 321 (392)
.+.|..++...++
T Consensus 228 ~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 228 NEAIFSANRLTGS 240 (316)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEeCCCCc
Confidence 6778777754443
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.82 E-value=3.1e-05 Score=67.42 Aligned_cols=236 Identities=8% Similarity=-0.075 Sum_probs=141.1
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCC
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWP 142 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~ 142 (392)
+..+|.+..++ .+|+.+... .|+..++....... +. .....+..++|.+....|+... ..+.|+.+++.
T Consensus 34 d~~~C~~~~~~-~~ll~~~~~-~I~~i~~~g~~~~~-~~-------~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~ 103 (349)
T 3v64_C 34 DRRSCKALGPE-PVLLFANRI-DIRQVLPHRSEYTL-LL-------NNLENAIALDFHHRRELVFWSDVTLDRILRANLN 103 (349)
T ss_dssp TSSCEEESSSC-CEEEEECBS-CEEEECTTSCCEEE-EE-------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCcccccccC-ceeEeeccc-ceEEEeCCCCeeEE-ee-------cCCCceEEEEEeccccEEEEEeccCCceEEEecC
Confidence 44556666663 455554444 37666665443211 11 1224578999998666666554 56789999987
Q ss_pred CCceeecccCCCCcEEEEEecCCCCeE-EEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeC
Q 016257 143 SLRIILDEPKAHKSVLDMDFSLDSEFL-ATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG 221 (392)
Q Consensus 143 ~~~~~~~~~~~~~~i~~i~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (392)
.................+++++.+..| ++-...+.|.+.++..... ..+....-.....++++|.+..+| .+..
T Consensus 104 g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly----~td~ 178 (349)
T 3v64_C 104 GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIY----WTDW 178 (349)
T ss_dssp SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEE----EEEC
T ss_pred CCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEE----Eecc
Confidence 655332222233356788998855544 5555667899999865433 333322223578999999777532 3334
Q ss_pred Cc-cEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeC
Q 016257 222 DK-ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPT 299 (392)
Q Consensus 222 ~d-~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 299 (392)
.. +.|..+++............-.....++++|++..|+.+. ..+.|..+|+........+ ... ......+++ .+
T Consensus 179 ~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~-~~~-~~~P~giav-~~ 255 (349)
T 3v64_C 179 GNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI-SQG-LPHPFAITV-FE 255 (349)
T ss_dssp SSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSS-CSSEEEEEE-ET
T ss_pred CCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEE-eCC-CCCceEEEE-EC
Confidence 44 8899999875433222222234568899998777766654 4577999998764433322 222 345677888 35
Q ss_pred CCeEEEEeCCCeEEEEEe
Q 016257 300 QRVVLTASKEWGAMITKL 317 (392)
Q Consensus 300 ~~~l~~~~~dg~i~iw~~ 317 (392)
+.++++-...+.|...+.
T Consensus 256 ~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 256 DSLYWTDWHTKSINSANK 273 (349)
T ss_dssp TEEEEEETTTTEEEEEET
T ss_pred CEEEEecCCCCeEEEEEc
Confidence 555555555677766653
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.80 E-value=3.9e-06 Score=75.24 Aligned_cols=241 Identities=7% Similarity=-0.033 Sum_probs=141.5
Q ss_pred CCeeEEEEcCC--CCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCC-----cE
Q 016257 64 GDPMTIAVNPS--GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG-----HL 136 (392)
Q Consensus 64 ~~v~~~~~sp~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i 136 (392)
..+..++|+|+ ...|+.+...+.|+.++..++... .+.. .......++++++|+ |+.+...+ .+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~-------~~~~P~giavd~dG~-lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTT-------NIGQCADVNFTLNGD-MVVVDDQSSDTNTGI 209 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECC-------CCSCEEEEEECTTCC-EEEEECCSCTTSEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-Eeec-------CCCCccEEEECCCCC-EEEEcCCCCcccceE
Confidence 35789999985 445665555477888887665532 2211 234679999999999 55444321 13
Q ss_pred EEEeCCCCceeecccCCCCcEEEEEecC-CCCeEEEEcCCCcEEEEECCCCeeeEEE-ecCCCcceEEEEecCCCCcceE
Q 016257 137 RIMHWPSLRIILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFL-TRNSDEKIELCRFSKDGTKPFL 214 (392)
Q Consensus 137 ~i~d~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~ 214 (392)
...+...+...............++++| ++.++++-..++.|+.+|..++.....+ ..........++|+|++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~L-- 287 (433)
T 4hw6_A 210 YLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWA-- 287 (433)
T ss_dssp EEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEE--
T ss_pred EEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEE--
Confidence 3333221111000111123456788999 6665556556788999998867653333 22222234579999999853
Q ss_pred EEEEEeCCccEEEEEeCC--Ccee--eeeecc---------------cCCCcEEEEE---------CCCCCEEEEEeCCC
Q 016257 215 FCTVQRGDKALLAVYDIS--TWNK--IGHKRL---------------LRKPASVLSI---------SLDGKYLAMGSKDG 266 (392)
Q Consensus 215 ~~~~~~~~d~~i~v~d~~--~~~~--~~~~~~---------------~~~~v~~~~~---------s~~~~~l~~~~~dg 266 (392)
.++....+.|..++.. ++.. ...+.. .-.....+++ .++|.+.++-...+
T Consensus 288 --Yvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~ 365 (433)
T 4hw6_A 288 --YIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH 365 (433)
T ss_dssp --EEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT
T ss_pred --EEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC
Confidence 3556677889998765 2211 011111 0123567899 77777777766778
Q ss_pred cEEEEecCCceeeeeeeccc---------------cCcceEEEEEe-eCCCeEEEEeCCCeEEEEEee
Q 016257 267 DICVVDVKKMEINHWSKRLH---------------LGTSIALVEFC-PTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 267 ~i~iwd~~~~~~~~~~~~~~---------------~~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~ 318 (392)
.|+.++. ++........+. .-.....++++ ++|.++++=...+.|+..+++
T Consensus 366 ~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 366 TVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 8999985 555443321100 01247889999 666666666666788777654
No 266
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.80 E-value=2.2e-06 Score=69.28 Aligned_cols=182 Identities=8% Similarity=-0.022 Sum_probs=119.8
Q ss_pred CeeEEEEcCCCCeEEEEeCC--CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEE-EeCCCcEEEEeC
Q 016257 65 DPMTIAVNPSGDDFVCSTTN--GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAA-GGVDGHLRIMHW 141 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~i~d~ 141 (392)
-...+.|++ +.++.+.+.+ ..|+.+|+.+++........ ...........++.|+. .-.++.+.+||.
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~--------~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP--------PPYFGAGIVAWRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC--------TTCCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC--------CCcceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 355888986 4455555554 48999999999866554321 12222222233445544 456899999999
Q ss_pred CCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCC----cceEEEEecCCCCcceEEEE
Q 016257 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD----EKIELCRFSKDGTKPFLFCT 217 (392)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~ 217 (392)
++.+.+.++...... ..+ .++++.|+.+..++.|.++|.++.+.+.++..... ..+..+.+. ++.. .
T Consensus 93 ~tl~~~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l-----y 163 (243)
T 3mbr_X 93 ATLTPRARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL-----L 163 (243)
T ss_dssp TTTEEEEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE-----E
T ss_pred CcCcEEEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE-----E
Confidence 999988776544322 334 35677777777788999999999988888764321 134556665 4442 3
Q ss_pred EEeCCccEEEEEeCCCceeeeeeccc-------------CCCcEEEEECCCCCEEEEEeC
Q 016257 218 VQRGDKALLAVYDISTWNKIGHKRLL-------------RKPASVLSISLDGKYLAMGSK 264 (392)
Q Consensus 218 ~~~~~d~~i~v~d~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~~~~ 264 (392)
+..-.+..|.+.|.++++.+..+... ..-.+.++++|+++.|++.+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 44556779999999999887665421 134588999998877766654
No 267
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.80 E-value=7.1e-07 Score=72.73 Aligned_cols=179 Identities=9% Similarity=-0.041 Sum_probs=121.3
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEE-EEeCCCcEEEEeCCCC
Q 016257 66 PMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHLRIMHWPSL 144 (392)
Q Consensus 66 v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~ 144 (392)
...+.|+ ++.++.+.+.+|.|+++|+++++..... ... ...-..+++. ++.|+ ....++.+.+||.++.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~------~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLG------NIFAEGLASD--GERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT------TCCEEEEEEC--SSCEEEEESSSCEEEEEETTTT
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC------CcceeEEEEe--CCEEEEEEccCCEEEEEECCcC
Confidence 3678887 3556667778889999999999876665 211 1112335553 34444 4456899999999999
Q ss_pred ceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCC----cceEEEEecCCCCcceEEEEEEe
Q 016257 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSD----EKIELCRFSKDGTKPFLFCTVQR 220 (392)
Q Consensus 145 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~ 220 (392)
+.+.++.-.... ..++ +|++.|+.+..++.|.++|.++.+.+.++..... ..+..+.|. +|.. .+..
T Consensus 127 ~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l-----yanv 197 (268)
T 3nok_A 127 QRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI-----YANI 197 (268)
T ss_dssp EEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE-----EEEE
T ss_pred cEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE-----EEEE
Confidence 988766543222 3333 5678888877789999999999988888764221 134567776 5542 3455
Q ss_pred CCccEEEEEeCCCceeeeeeccc-------------CCCcEEEEECCCCCEEEEEe
Q 016257 221 GDKALLAVYDISTWNKIGHKRLL-------------RKPASVLSISLDGKYLAMGS 263 (392)
Q Consensus 221 ~~d~~i~v~d~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~~~ 263 (392)
-.++.|.+.|.++++.+..+... ..-.+.++++|+++.|++.+
T Consensus 198 w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 198 WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 56789999999999887655432 13568899999876655554
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.79 E-value=1.4e-06 Score=75.11 Aligned_cols=184 Identities=13% Similarity=0.064 Sum_probs=115.3
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecc-cC------------------CCCcEEEEEecC-CCCeEEEEc
Q 016257 114 PQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDE-PK------------------AHKSVLDMDFSL-DSEFLATTS 173 (392)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~------------------~~~~i~~i~~~~-~~~~l~~~~ 173 (392)
...+++|.+++++++++..++.|..|+..+++..... .. ....+..+++++ +++ |+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 3467899999987888888999999998765432111 00 012578899998 555 55554
Q ss_pred CCCcEEEEECCCCeeeEEEec----CCCcceEEEEecC-CCCcceEEEEEEeC-----------------CccEEEEEeC
Q 016257 174 TDGSARIWKTEDGVAWTFLTR----NSDEKIELCRFSK-DGTKPFLFCTVQRG-----------------DKALLAVYDI 231 (392)
Q Consensus 174 ~d~~i~vwd~~~~~~~~~~~~----~~~~~v~~~~~~~-~~~~~~~~~~~~~~-----------------~d~~i~v~d~ 231 (392)
..+.+..+|..+++. ..+.. ........+++.+ +|.. .++.. .++.|..+|.
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l-----~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIV-----YFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCE-----EEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEE-----EEECCcccccccccceehcccCCCceEEEEeC
Confidence 445588888765532 22211 1112467899999 8863 22221 2478999998
Q ss_pred CCceeeeeecccCCCcEEEEECCCCCEEEEE-eCCCcEEEEecCCce--eeeeeeccccCcceEEEEEeeCCCeEEEEeC
Q 016257 232 STWNKIGHKRLLRKPASVLSISLDGKYLAMG-SKDGDICVVDVKKME--INHWSKRLHLGTSIALVEFCPTQRVVLTASK 308 (392)
Q Consensus 232 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 308 (392)
.+++....... ......++++|+|+.|+++ +.++.|.+|++.... ....+.. . .+ ...+++.++|.++++...
T Consensus 173 ~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~-~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 173 STKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-I-PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-C-SS-EEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-C-CC-CCCeEECCCCCEEEEecC
Confidence 76654322221 2344579999999877665 456889999987531 1111111 1 33 788999999987666544
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.78 E-value=2.3e-05 Score=69.19 Aligned_cols=207 Identities=3% Similarity=-0.064 Sum_probs=126.9
Q ss_pred CCCeeEEEEcCCCCeEEEEe-CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEE-EeCCCcEEEEe
Q 016257 63 EGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAA-GGVDGHLRIMH 140 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~i~d 140 (392)
...+..++|++.+..|+.+. ..+.|+.+++...... .+... .......+++.+.+..|+. -...+.|.+.+
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~~~~------~~~~p~glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EVVST------GLESPGGLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE-EEECS------SCSCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE-EEEeC------CCCCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 45688999998666666544 5677888887655421 11111 1124467888875555544 44567888888
Q ss_pred CCCCceeecccCCCCcEEEEEecCCCCeEEEEc-CC-CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEE
Q 016257 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS-TD-GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d-~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
++.................++++|.+..|+.+. .. +.|..+++... ....+....-.....++++|++..+| +
T Consensus 188 ~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGlavd~~~~~lY----~ 262 (386)
T 3v65_B 188 LDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMY----W 262 (386)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEEGGGTEEE----E
T ss_pred CCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCeeeEEEeCCCCEEE----E
Confidence 765433322233334678999999776666554 33 67888887543 33333322223578999998877643 5
Q ss_pred EeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 219 QRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
+-...+.|..+|+..................+++ ..+.++++-...+.|..+|..+++....+
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 263 VDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 5566789999998754332222222345567777 34445555556778888886666655554
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.77 E-value=1.4e-05 Score=65.53 Aligned_cols=202 Identities=7% Similarity=0.057 Sum_probs=129.2
Q ss_pred eeCCCCCeeEEEEcCCCCeEE-EEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEE
Q 016257 59 FDESEGDPMTIAVNPSGDDFV-CSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLR 137 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 137 (392)
+.+-.+.+..++|+|+++.|+ +...++.|...|.. ++....+.. ........+++.+++.++++.-.++.+.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l------~g~~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL------DFVKDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC------SSCSSEEEEEECSTTEEEEEETTTTEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec------CCCCChHHeEEeCCCEEEEEECCCCcEE
Confidence 445556799999999877555 46677777777776 443333321 1224678899999887666655677888
Q ss_pred EEeCCCCce---eecc------cCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECC---CCeeeEEEec------CCCcc
Q 016257 138 IMHWPSLRI---ILDE------PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE---DGVAWTFLTR------NSDEK 199 (392)
Q Consensus 138 i~d~~~~~~---~~~~------~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~---~~~~~~~~~~------~~~~~ 199 (392)
++++..... .... .........++|+|.++.|+++.+.....+|.++ ....+..+.. .....
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 988765432 1111 1122357899999998777777765555566554 1112222211 11224
Q ss_pred eEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC---------CCcEEEEECCCCCEEEEEeCCCcEEE
Q 016257 200 IELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR---------KPASVLSISLDGKYLAMGSKDGDICV 270 (392)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~dg~i~i 270 (392)
+.+++++|....+ ++.+.....+.++|... +.+..+.... .....++|.++|+ |+..++-+.++.
T Consensus 175 ~S~l~~dp~tg~l----liLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~ 248 (255)
T 3qqz_A 175 VSGAEFNQQKNTL----LVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYR 248 (255)
T ss_dssp CCEEEEETTTTEE----EEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEE
T ss_pred ceeEEEcCCCCeE----EEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEE
Confidence 7899999987763 46677889999999774 4544443321 2567899999997 555577776666
Q ss_pred Eec
Q 016257 271 VDV 273 (392)
Q Consensus 271 wd~ 273 (392)
|.-
T Consensus 249 f~~ 251 (255)
T 3qqz_A 249 FTP 251 (255)
T ss_dssp EEC
T ss_pred EEe
Confidence 654
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.75 E-value=2.2e-05 Score=69.38 Aligned_cols=234 Identities=8% Similarity=-0.091 Sum_probs=139.7
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE-eCCCcEEEEeCCCC
Q 016257 66 PMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSL 144 (392)
Q Consensus 66 v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~ 144 (392)
-.|.+..+ ..+|+.+... .|+..++........ . .....+..++|.+.+..|+.. ...+.|+.+++...
T Consensus 79 ~~C~~~~~-~~~l~~~~~~-~I~~i~~~~~~~~~~-~-------~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 79 RSCKALGP-EPVLLFANRI-DIRQVLPHRSEYTLL-L-------NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp SCEEECSS-CCEEEEECBS-CEEEECTTSCCCEEE-E-------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CeECCccc-cceeEeecCc-cceeeccCCCcEEEE-e-------cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 34555444 3355554443 477777655432211 1 123467899999866666554 45678999998766
Q ss_pred ceeecccCCCCcEEEEEecCCCCeE-EEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc
Q 016257 145 RIILDEPKAHKSVLDMDFSLDSEFL-ATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK 223 (392)
Q Consensus 145 ~~~~~~~~~~~~i~~i~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d 223 (392)
...............+++++.+..| ++-...+.|.+.++..... ..+....-.....++++|.+..+| ++....
T Consensus 149 ~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~l~~P~giavdp~~g~ly----~td~~~ 223 (386)
T 3v65_B 149 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIY----WTDWGN 223 (386)
T ss_dssp CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSSCSCEEEEEEETTTTEEE----EEECSS
T ss_pred CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCCCCCCcEEEEEcCCCeEE----EeccCC
Confidence 5433222233345678888855554 4555567888888864433 333322223578999999877633 333334
Q ss_pred -cEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCC
Q 016257 224 -ALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQR 301 (392)
Q Consensus 224 -~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 301 (392)
+.|..+++............-.....++++|++..|+.+. ..+.|..+|+........+ ... ......+++ ..+.
T Consensus 224 ~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~-~~~-~~~P~giav-~~~~ 300 (386)
T 3v65_B 224 TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI-SQG-LPHPFAITV-FEDS 300 (386)
T ss_dssp SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEE-CSS-CSSEEEEEE-ETTE
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEE-ECC-CCCceEEEE-ECCE
Confidence 7899999875433222222234568899998777666654 4577999998754433332 222 345678888 4555
Q ss_pred eEEEEeCCCeEEEEEe
Q 016257 302 VVLTASKEWGAMITKL 317 (392)
Q Consensus 302 ~l~~~~~dg~i~iw~~ 317 (392)
++++-...+.|..++.
T Consensus 301 ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 301 LYWTDWHTKSINSANK 316 (386)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred EEEeeCCCCeEEEEEC
Confidence 5556656677776663
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.73 E-value=3.2e-06 Score=78.75 Aligned_cols=244 Identities=10% Similarity=0.031 Sum_probs=147.2
Q ss_pred EEEcCCCCe----EEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeE-EEEecCCCCEEEEEe------CCCcEE
Q 016257 69 IAVNPSGDD----FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK-CLSFSVDGSRFAAGG------VDGHLR 137 (392)
Q Consensus 69 ~~~sp~~~~----l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~------~dg~i~ 137 (392)
++++|.+.. |+.++.|+.+.-+|..+++...+....... ....+. .... .++ .+++++ .++.|+
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~---~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~ 185 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIK---VGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLT 185 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGG---GTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCC---ccceeecCCEE-ECC-EEEEEecccccCCCCeEE
Confidence 445444444 888888999999999888876554321100 000111 0011 134 555554 378999
Q ss_pred EEeCCCCceeecccCCCCc-------------------------------------E-EEEEecCCCCeEEEEcCC----
Q 016257 138 IMHWPSLRIILDEPKAHKS-------------------------------------V-LDMDFSLDSEFLATTSTD---- 175 (392)
Q Consensus 138 i~d~~~~~~~~~~~~~~~~-------------------------------------i-~~i~~~~~~~~l~~~~~d---- 175 (392)
.+|.++++.+.+....... + ..+++.++..+++.+..+
T Consensus 186 A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~ 265 (599)
T 1w6s_A 186 AYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPW 265 (599)
T ss_dssp EEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCS
T ss_pred EEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccc
Confidence 9999999886544322110 0 134566777777777655
Q ss_pred ------------CcEEEEECCCCeeeEEEecCCCc--------ceEEEEec-CCCCcceEEEEEEeCCccEEEEEeCCCc
Q 016257 176 ------------GSARIWKTEDGVAWTFLTRNSDE--------KIELCRFS-KDGTKPFLFCTVQRGDKALLAVYDISTW 234 (392)
Q Consensus 176 ------------~~i~vwd~~~~~~~~~~~~~~~~--------~v~~~~~~-~~~~~~~~~~~~~~~~d~~i~v~d~~~~ 234 (392)
+.|..+|.++++.+-.++..+.. ...-+... .+|+.. -.++.++.+|.++++|.+++
T Consensus 266 ~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~--~~v~~~~~~G~l~~lD~~tG 343 (599)
T 1w6s_A 266 NETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKAR--KLLTHPDRNGIVYTLDRTDG 343 (599)
T ss_dssp CGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEE--EEEEEECTTSEEEEEETTTC
T ss_pred cCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEE--EEEEEECCCcEEEEEECCCC
Confidence 37999999999988777654321 01112222 455321 11566889999999999999
Q ss_pred eeeeeecccC-------------CC--------------------------cEEEEECCCCCEEEEEe------------
Q 016257 235 NKIGHKRLLR-------------KP--------------------------ASVLSISLDGKYLAMGS------------ 263 (392)
Q Consensus 235 ~~~~~~~~~~-------------~~--------------------------v~~~~~s~~~~~l~~~~------------ 263 (392)
+.+....... .+ -..++++|+..++++..
T Consensus 344 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 423 (599)
T 1w6s_A 344 ALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFML 423 (599)
T ss_dssp CEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCC
T ss_pred CEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccc
Confidence 8765433211 00 12356777766665431
Q ss_pred ---------------------------CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEE
Q 016257 264 ---------------------------KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITK 316 (392)
Q Consensus 264 ---------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 316 (392)
.+|.|.-||+.+++.+-..... .+...-.....+.+++.++.||.++.+|
T Consensus 424 ~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagg~vf~gt~dg~l~A~D 500 (599)
T 1w6s_A 424 PYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER---FAVWGGTMATAGDLVFYGTLDGYLKARD 500 (599)
T ss_dssp CCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred cccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC---CCccCcceEecCCEEEEECCCCeEEEEE
Confidence 3467899999998876554322 1222112334567788899999999999
Q ss_pred eecCcc
Q 016257 317 LTVPAD 322 (392)
Q Consensus 317 ~~~~~~ 322 (392)
.++++.
T Consensus 501 ~~tG~~ 506 (599)
T 1w6s_A 501 SDTGDL 506 (599)
T ss_dssp TTTCCE
T ss_pred CCCCCE
Confidence 887765
No 273
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.72 E-value=2.6e-05 Score=75.88 Aligned_cols=243 Identities=11% Similarity=0.046 Sum_probs=147.1
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccc---cCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEE
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAK---KMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 139 (392)
...|.++...++|. |..|+.++-|..++............. ....+ ....|.++...++|. |..|+.++-|..+
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~v~~i~~d~~g~-lWigt~~~Gl~~~ 388 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSL-SNKVVSSVCDDGQGK-LWIGTDGGGINVF 388 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCC-SSSCEEEEEECTTSC-EEEEEBSSCEEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCC-CCcceEEEEEcCCCC-EEEEeCCCcEEEE
Confidence 45799999988886 555665555888886654322111000 00111 235789999888876 4556656668899
Q ss_pred eCCCCceeecc---cCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe-cCCCcceEEEEecCCCCcceEE
Q 016257 140 HWPSLRIILDE---PKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT-RNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 140 d~~~~~~~~~~---~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
+..+++...-. ......|.++...+++.+.+ |+.++-+..+|.++++...... ......|.++...+++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~----- 462 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK----- 462 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-----
T ss_pred ECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-----
Confidence 97654332111 11234789998888776544 6665678999987665432211 11234688888888876
Q ss_pred EEEEeCCccEEEEEeCCCceeeeeeccc-----CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeee-ccccCc
Q 016257 216 CTVQRGDKALLAVYDISTWNKIGHKRLL-----RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSK-RLHLGT 289 (392)
Q Consensus 216 ~~~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~ 289 (392)
+..++. +-|..||..+++........ ...|.++...++|.+.+ |+.++-|..||.++++...... .+-...
T Consensus 463 -lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~ 539 (781)
T 3v9f_A 463 -IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSN 539 (781)
T ss_dssp -EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCS
T ss_pred -EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCC
Confidence 344544 45889998875543222111 35788999998887655 4443348889987776544321 111145
Q ss_pred ceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 290 SIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 290 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
.|.++...++|.+.++. .+|.+..|+..
T Consensus 540 ~i~~i~~d~~g~lWi~T-~~Glv~~~d~~ 567 (781)
T 3v9f_A 540 TINQIYRSSKGQMWLAT-GEGLVCFPSAR 567 (781)
T ss_dssp CEEEEEECTTSCEEEEE-TTEEEEESCTT
T ss_pred eeEEEEECCCCCEEEEE-CCCceEEECCC
Confidence 78999988888765544 45543666543
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.72 E-value=2.4e-06 Score=81.23 Aligned_cols=247 Identities=12% Similarity=0.102 Sum_probs=136.4
Q ss_pred eEEEEcC-CCCeEEEEeCCC-----------eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC-C
Q 016257 67 MTIAVNP-SGDDFVCSTTNG-----------GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-D 133 (392)
Q Consensus 67 ~~~~~sp-~~~~l~~~~~d~-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d 133 (392)
...++.| +++.++.|+.+. .+.+||..+++....... . ..+.....++++..+++.++.|+. +
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~-~---~~~~~~~~~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT-V---TKHDMFCPGISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE-E---CSCCCSSCEEEECTTSCEEEECSSST
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc-C---CCCCCccccccCCCCCCEEEeCCCCC
Confidence 3567777 888888887542 577888877653221111 0 012233456788889999999884 4
Q ss_pred CcEEEEeCCCCceeecccCCCC-cEEEEEecCCCCeEEEEc-CC-----CcEEEEECCCCeeeEEEecCCCcce----EE
Q 016257 134 GHLRIMHWPSLRIILDEPKAHK-SVLDMDFSLDSEFLATTS-TD-----GSARIWKTEDGVAWTFLTRNSDEKI----EL 202 (392)
Q Consensus 134 g~i~i~d~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~-~d-----~~i~vwd~~~~~~~~~~~~~~~~~v----~~ 202 (392)
..+.+||..+.+.......... .-.+++..++++.++.|+ .+ ..+.+||..+++-... ......+. ..
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~~p~~~~~~~ 343 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKVNPMLTADKQ 343 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCSGGGCCCCTT
T ss_pred CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCcccccccccccc
Confidence 6899999987654332111111 223455667899999888 34 4689999987654332 10000000 00
Q ss_pred EEecCCCCcceEEE-----EEEeCCccEEEEEeCCCceeeeeeccc---------CCCcEEEEEC-CCCCEEEEEeCCC-
Q 016257 203 CRFSKDGTKPFLFC-----TVQRGDKALLAVYDISTWNKIGHKRLL---------RKPASVLSIS-LDGKYLAMGSKDG- 266 (392)
Q Consensus 203 ~~~~~~~~~~~~~~-----~~~~~~d~~i~v~d~~~~~~~~~~~~~---------~~~v~~~~~s-~~~~~l~~~~~dg- 266 (392)
..+..++.. +++- ....+....+..||..+..-....... ...-.++.+. .+++++++|+.++
T Consensus 344 ~~~~~~~~i-yv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 344 GLYRSDNHA-WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp GGGTTTCSC-CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred ceeecCCce-EEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 111222221 1100 111122346788888765433222111 1123444454 3778888887542
Q ss_pred ----------cEEEEecCCceeeeee-eccccCcceEEEEEeeCCCeEEEEeCC-----------CeEEEEEeec
Q 016257 267 ----------DICVVDVKKMEINHWS-KRLHLGTSIALVEFCPTQRVVLTASKE-----------WGAMITKLTV 319 (392)
Q Consensus 267 ----------~i~iwd~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~i~iw~~~~ 319 (392)
.|.+||..+.+..... ...+....-.++...|++++++.|+.+ ..+.+||...
T Consensus 423 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp SSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 5788888876544332 111102222345667899999999854 4678888764
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.71 E-value=6.8e-06 Score=70.20 Aligned_cols=194 Identities=13% Similarity=0.022 Sum_probs=118.9
Q ss_pred CCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCC--cEEEEECCCCeeeE
Q 016257 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDG--SARIWKTEDGVAWT 190 (392)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~ 190 (392)
.....++|+++++++++-..++.|..+|.+.. ... ..........++++++++++++..... .|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~-~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQI-HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEE-EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEE-EEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 35678999999986666667889999997653 222 222234688999999998666553322 46777777776543
Q ss_pred EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee-eeee-------c--ccCCCcEEEEECCCCCEEE
Q 016257 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK-IGHK-------R--LLRKPASVLSISLDGKYLA 260 (392)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~-~~~~-------~--~~~~~v~~~~~s~~~~~l~ 260 (392)
............++..+++.. +++...++.|..+|...++. +... . ..-.....+ +|+++.|+
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~-----~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQY-----LTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEE-----EEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEeCCCccccCcccccCCCcE-----EEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 332222223345555554432 34555678999999875421 1100 0 111233445 78887776
Q ss_pred EEe-CCCcEEEEecCC-cee--eeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 261 MGS-KDGDICVVDVKK-MEI--NHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 261 ~~~-~dg~i~iwd~~~-~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
++. ..+.|..|++.. ++. ...+.. ......++++++|+++++....+.|.+++..
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 655 567899999875 332 111111 2345678999999887777777888888754
No 276
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.69 E-value=0.00011 Score=63.19 Aligned_cols=278 Identities=13% Similarity=0.063 Sum_probs=146.0
Q ss_pred CceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeC
Q 016257 4 GGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTT 83 (392)
Q Consensus 4 ~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 83 (392)
...+.++.|.+++ .+++.|.. +. ++.-...+........ ........+.++.|++ +..++ ++.
T Consensus 35 ~~~~~~v~~~~~~---~~~~~G~~-------g~--i~~s~DgG~tW~~~~~---~~~~~~~~~~~i~~~~-~~~~~-~g~ 97 (327)
T 2xbg_A 35 TATILDMSFIDRH---HGWLVGVN-------AT--LMETRDGGQTWEPRTL---VLDHSDYRFNSVSFQG-NEGWI-VGE 97 (327)
T ss_dssp SSCEEEEEESSSS---CEEEEETT-------TE--EEEESSTTSSCEECCC---CCSCCCCEEEEEEEET-TEEEE-EEE
T ss_pred CCcEEEEEECCCC---cEEEEcCC-------Ce--EEEeCCCCCCCeECCC---CCCCCCccEEEEEecC-CeEEE-EEC
Confidence 4568888887654 23444432 11 4444433332211100 0112244688999986 44444 455
Q ss_pred CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeec-ccCCCCcEEEEEe
Q 016257 84 NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD-EPKAHKSVLDMDF 162 (392)
Q Consensus 84 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~ 162 (392)
.+.| +....+.......... ....+.+..+.+.+++..++++ .++.|.. ..+.++.-.. .......+..+.+
T Consensus 98 ~g~i--~~S~DgG~tW~~~~~~---~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~ 170 (327)
T 2xbg_A 98 PPIM--LHTTDGGQSWSQIPLD---PKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNR 170 (327)
T ss_dssp TTEE--EEESSTTSSCEECCCC---TTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEE
T ss_pred CCeE--EEECCCCCCceECccc---cCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEE
Confidence 6633 3343332222221110 0122456778887777666554 4665432 2222332111 1233447889999
Q ss_pred cCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc
Q 016257 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL 242 (392)
Q Consensus 163 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~ 242 (392)
.+++.+++.+.. +.+..-+-..++.-..+.......+..+++.+++. +...+.++.+.+.+...++.-.....
T Consensus 171 ~~~~~~~~~g~~-G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~------~~~~~~~G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 171 SPSGEYVAVSSR-GSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR------LWMIVNGGKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp CTTSCEEEEETT-SSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC------EEEEETTTEEEEEETTEEEEECCCBC
T ss_pred cCCCcEEEEECC-CcEEEEeCCCCCceeECCCCCCCccceeEECCCCC------EEEEeCCceEEEecCCCCCeeEeccC
Confidence 998887776654 55444321113333333333344688999999886 34555677777764332333222221
Q ss_pred ----cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec--cccCcceEEEEEeeCCCeEEEEeCCCeEEEEE
Q 016257 243 ----LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR--LHLGTSIALVEFCPTQRVVLTASKEWGAMITK 316 (392)
Q Consensus 243 ----~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 316 (392)
....+..+.+.+++..++++. +|.| ++..+.++.-..+.. .. ...+.++.|.++++ +++++.+|.|.-++
T Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~-~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 244 PLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKV-PSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp TTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTS-SSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred CcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCC-CCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 123578899998887777665 6766 444555543332221 12 35678899986655 66667788765543
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.68 E-value=3.1e-05 Score=63.47 Aligned_cols=204 Identities=9% Similarity=0.030 Sum_probs=125.5
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCC
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTN 84 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d 84 (392)
..+..++|+|++.. |.+.... .-.|+.++..+... ....+.+ ......+++.+++.++++.-.+
T Consensus 27 ~~lSGla~~~~~~~--L~aV~d~--------~~~I~~ld~~g~v~-----~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 27 NNISSLTWSAQSNT--LFSTINK--------PAAIVEMTTNGDLI-----RTIPLDF-VKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp SCEEEEEEETTTTE--EEEEEET--------TEEEEEEETTCCEE-----EEEECSS-CSSEEEEEECSTTEEEEEETTT
T ss_pred cCcceeEEeCCCCE--EEEEECC--------CCeEEEEeCCCCEE-----EEEecCC-CCChHHeEEeCCCEEEEEECCC
Confidence 45889999998655 3332222 23477777653221 1222333 3568899999988776766677
Q ss_pred CeEEEEEEeCCccceeeccccC--CCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC---Cceeecc-------cC
Q 016257 85 GGCKLFEVYGGATDINLLAKKM--PPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS---LRIILDE-------PK 152 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~-------~~ 152 (392)
+.+.++++.............. ...........++|+|+++.|+++.+.....+|.+.. ....... ..
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence 8899999876553111111111 1123456789999999998888877665556665531 1111111 11
Q ss_pred CCCcEEEEEecCC-CCeEEEEcCCCcEEEEECCCCeeeEEEecCCC--------cceEEEEecCCCCcceEEEEEEeCCc
Q 016257 153 AHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAWTFLTRNSD--------EKIELCRFSKDGTKPFLFCTVQRGDK 223 (392)
Q Consensus 153 ~~~~i~~i~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~~~~d 223 (392)
....+.+++++|. +++++.+..++.+..+|.+ ++.+..+..... .....|+|.++|+ +...++.
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~------lyIvsE~ 243 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN------IYIVSEP 243 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC------EEEEETT
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC------EEEEcCC
Confidence 2235789999995 4566667777889999975 556555543321 2568999999997 4555666
Q ss_pred cEEEEEeC
Q 016257 224 ALLAVYDI 231 (392)
Q Consensus 224 ~~i~v~d~ 231 (392)
+.++.+..
T Consensus 244 n~~y~f~~ 251 (255)
T 3qqz_A 244 NRFYRFTP 251 (255)
T ss_dssp TEEEEEEC
T ss_pred ceEEEEEe
Confidence 77777654
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.65 E-value=0.00015 Score=62.13 Aligned_cols=208 Identities=8% Similarity=-0.080 Sum_probs=125.2
Q ss_pred CCCeeEEEEcCCCCeEEEEe-CCCeEEEEEEeCC---ccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE-eCCCcEE
Q 016257 63 EGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGG---ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLR 137 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~-~d~~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~ 137 (392)
...+..++|++.+..|+.+. .++.|..+++... .....+... .......+++.+.+..|+.+ ...+.|.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~------~~~~p~glavd~~~~~ly~~d~~~~~I~ 102 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR------DIQAPDGLAVDWIHSNIYWTDSVLGTVS 102 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS------SCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC------CCCCcCEEEEeecCCeEEEEECCCCEEE
Confidence 45688999998776666554 5678988887652 111111110 11345788998755555444 5678899
Q ss_pred EEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCC--CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 138 IMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD--GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 138 i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d--~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
+.+++.................++++|.+..|+.+... +.|...++. ++....+....-.....+++++++..+
T Consensus 103 ~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~l--- 178 (316)
T 1ijq_A 103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRL--- 178 (316)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEE---
T ss_pred EEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEE---
Confidence 99987543322222233467899999977666555432 678888875 433333332223357899999988763
Q ss_pred EEEEeCCccEEEEEeCCCceeeeeecc--cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 216 CTVQRGDKALLAVYDISTWNKIGHKRL--LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 216 ~~~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
.++-...+.|..+|+........... .......+++. .+.++++-...+.|..+|..+++....+
T Consensus 179 -Y~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 179 -YWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp -EEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred -EEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 25556678999999975332211111 12345677774 3445555556678888887777655444
No 279
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.65 E-value=2.1e-05 Score=73.30 Aligned_cols=242 Identities=13% Similarity=0.076 Sum_probs=144.3
Q ss_pred CCeEEEEeCCCeEEEEEEeCCccceeeccccCC-CCC-CCCCeEEEEecCCCC-EEEEEe------CCCcEEEEeCCCCc
Q 016257 75 GDDFVCSTTNGGCKLFEVYGGATDINLLAKKMP-PLQ-DAGPQKCLSFSVDGS-RFAAGG------VDGHLRIMHWPSLR 145 (392)
Q Consensus 75 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~s~~~~-~l~~~~------~dg~i~i~d~~~~~ 145 (392)
+..++.++.++.|.-+|..+++...+....... ... ...++. ..=..+++ .+++++ .++.|+.+|.++++
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v-~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTI-VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEE-EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEE-eCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 457788889999999999998876554322100 000 011111 10011233 566654 37899999999998
Q ss_pred eeecccCCCC-----------------------------------------cEEEEEecCCCCeEEEEcC----------
Q 016257 146 IILDEPKAHK-----------------------------------------SVLDMDFSLDSEFLATTST---------- 174 (392)
Q Consensus 146 ~~~~~~~~~~-----------------------------------------~i~~i~~~~~~~~l~~~~~---------- 174 (392)
.+........ .-..++++|+..+++.+..
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 7654322100 0123456676677776552
Q ss_pred ----------C----CcEEEEECCCCeeeEEEecCCCc-----ceEE-EEec---CCCCcceEEEEEEeCCccEEEEEeC
Q 016257 175 ----------D----GSARIWKTEDGVAWTFLTRNSDE-----KIEL-CRFS---KDGTKPFLFCTVQRGDKALLAVYDI 231 (392)
Q Consensus 175 ----------d----~~i~vwd~~~~~~~~~~~~~~~~-----~v~~-~~~~---~~~~~~~~~~~~~~~~d~~i~v~d~ 231 (392)
| +.|..+|.++++.+-.++..+.. .+.. +.+. .+|+.. -.++.++.+|.++++|.
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~--~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIV--KATAHADRNGFFYVVDR 353 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEE--EEEEEECTTSEEEEEET
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEE--EEEEEECCCceEEEEEC
Confidence 2 57999999999998877643210 0111 1122 355421 12677889999999999
Q ss_pred CCceeeeeecccC-------------CC--------------------------------cEEEEECCCCCEEEEEe---
Q 016257 232 STWNKIGHKRLLR-------------KP--------------------------------ASVLSISLDGKYLAMGS--- 263 (392)
Q Consensus 232 ~~~~~~~~~~~~~-------------~~--------------------------------v~~~~~s~~~~~l~~~~--- 263 (392)
++++.+....... .+ -..++++|+...+++..
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 9988764433221 00 01346677665555432
Q ss_pred ------------------------------CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEE
Q 016257 264 ------------------------------KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAM 313 (392)
Q Consensus 264 ------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 313 (392)
.+|.|..||+.+++..-..... .++..-.....+.+++.++.||.++
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH---LPLWAGVLATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES---SCCCSCCEEETTTEEEEECTTSEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC---CCCcccceEeCCCEEEEECCCCcEE
Confidence 2578999999999876554322 2222222233566788899999999
Q ss_pred EEEeecCcc
Q 016257 314 ITKLTVPAD 322 (392)
Q Consensus 314 iw~~~~~~~ 322 (392)
.+|.++++.
T Consensus 511 A~D~~tG~~ 519 (582)
T 1flg_A 511 AFDAKSGKE 519 (582)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCCE
Confidence 999887765
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.63 E-value=0.00013 Score=64.64 Aligned_cols=232 Identities=9% Similarity=-0.059 Sum_probs=137.9
Q ss_pred eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCCCC----ceeeccc
Q 016257 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSL----RIILDEP 151 (392)
Q Consensus 77 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~----~~~~~~~ 151 (392)
+|+.+.. ..|+..++......... .....+..++|++.+..|+... ..+.|+.+++... .......
T Consensus 85 ~ll~~~~-~~I~~i~l~~~~~~~~~--------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 85 YLFFTNR-HEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp EEEEEET-TEEEEECTTSCSCEEEE--------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred eeEEecc-ceeEEEccCCcceeEec--------cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence 5555444 55887777655422211 1235788999998666666654 4678888888652 1222222
Q ss_pred CCCCcEEEEEecCCCC-eEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEe
Q 016257 152 KAHKSVLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (392)
Q Consensus 152 ~~~~~i~~i~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d 230 (392)
........+++.+.++ ++++-...+.|.+.+++.......+... ......++++|.+..+| ..-.+..+.|...+
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~-~~~P~~iavdp~~g~ly---~td~~~~~~I~~~~ 231 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMY---WTDWGTPAKIKKGG 231 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECS-SCCEEEEEEETTTTEEE---EEECSSSCCEEEEE
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCC-CCCcceEEEecccCeEE---EEeCCCCCEEEEEe
Confidence 2334678899998544 4455556788999998755443333322 33578999999877533 12223347899999
Q ss_pred CCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCC
Q 016257 231 ISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKE 309 (392)
Q Consensus 231 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 309 (392)
+............-.....+++++++..|+.+. ..+.|..+|+....................+++. .+.++++-...
T Consensus 232 ~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~ 310 (400)
T 3p5b_L 232 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIIN 310 (400)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSS
T ss_pred CCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCC
Confidence 875433322232235678999999887777665 4578999998765443333211112345677763 34455555566
Q ss_pred CeEEEEEeecCcc
Q 016257 310 WGAMITKLTVPAD 322 (392)
Q Consensus 310 g~i~iw~~~~~~~ 322 (392)
+.|..++...+..
T Consensus 311 ~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 311 EAIFSANRLTGSD 323 (400)
T ss_dssp CSEEEEESSSCCC
T ss_pred CeEEEEEcCCCCc
Confidence 7777776444433
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.58 E-value=2.7e-05 Score=66.30 Aligned_cols=189 Identities=11% Similarity=0.156 Sum_probs=121.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCC----CC---eEEEEc-C--CCcEEEEECC-CCeeeEE
Q 016257 123 DGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLD----SE---FLATTS-T--DGSARIWKTE-DGVAWTF 191 (392)
Q Consensus 123 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~----~~---~l~~~~-~--d~~i~vwd~~-~~~~~~~ 191 (392)
...+++.....+-+.+||+ +++.+..+.. +.+..+..-|+ ++ ++++.. . +++|.+|++. ....+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3446666667788999999 7887766543 45666666552 32 223333 3 5789999773 2223444
Q ss_pred Eec---C--CC-cceEEEEe--cCCCCcceEEEEEEeCCccEEEEEeCC-------CceeeeeecccCCCcEEEEECCCC
Q 016257 192 LTR---N--SD-EKIELCRF--SKDGTKPFLFCTVQRGDKALLAVYDIS-------TWNKIGHKRLLRKPASVLSISLDG 256 (392)
Q Consensus 192 ~~~---~--~~-~~v~~~~~--~~~~~~~~~~~~~~~~~d~~i~v~d~~-------~~~~~~~~~~~~~~v~~~~~s~~~ 256 (392)
+.. + .. ..+..+++ +|.....+ ++....++.+..|++. +.+.++.+.. ...+..+...+..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~y---afV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~ 191 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYY---AMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEY 191 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEE---EEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTT
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEE---EEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCC
Confidence 421 1 11 35677777 66544322 5677777999999883 3345555554 4578888999999
Q ss_pred CEEEEEeCCCcEEEEecC-----CceeeeeeeccccCcceEEEEEe--eCCC-eEEEEe-CCCeEEEEEee
Q 016257 257 KYLAMGSKDGDICVVDVK-----KMEINHWSKRLHLGTSIALVEFC--PTQR-VVLTAS-KEWGAMITKLT 318 (392)
Q Consensus 257 ~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~~~~~~~i~~~~~s--~~~~-~l~~~~-~dg~i~iw~~~ 318 (392)
..|+.+-++.-|..++.+ +++.+......+....+..|++- ++++ +|++++ .+++..+|+..
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999999998767777755 34454443334434578999984 4555 566555 67799999986
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.52 E-value=0.0001 Score=63.16 Aligned_cols=207 Identities=8% Similarity=-0.094 Sum_probs=126.5
Q ss_pred CCeeEEEEcCCCCeEEEE-eCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEE-EEeCCCcEEEEeC
Q 016257 64 GDPMTIAVNPSGDDFVCS-TTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHLRIMHW 141 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~ 141 (392)
..+.+++|++.+..|+.+ ...+.|..++............. .-.....+++.+.+..|+ +-...+.|.++++
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~------~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~ 108 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS------GLLSPDGLACDWLGEKLYWTDSETNRIEVSNL 108 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE------CCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC------CCCCccEEEEEcCCCeEEEEECCCCEEEEEEC
Confidence 357789999866655544 45677888887655321111111 113457888887554554 4445678999998
Q ss_pred CCCceeecccCCCCcEEEEEecCCCCeEEEEc--CCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEE
Q 016257 142 PSLRIILDEPKAHKSVLDMDFSLDSEFLATTS--TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (392)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (392)
+.................++++|.+..|+.+. ..+.|...++.. +....+....-.....+++++++..+ .++
T Consensus 109 dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l~~Pnglavd~~~~~l----Y~a 183 (318)
T 3sov_A 109 DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKL----YWA 183 (318)
T ss_dssp TSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEE----EEE
T ss_pred CCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECCCCCccEEEEeccCCEE----EEE
Confidence 65433222223334678999999766666555 357788888753 33333322222357899999987763 355
Q ss_pred eCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 220 RGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 220 ~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
-...+.|..+|+..................+++.. +.++.+-...+.|..++..+++....+
T Consensus 184 D~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 184 DAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred ECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEE
Confidence 66778999999875333222222234456777753 344455556678999998777655544
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=0.00012 Score=65.86 Aligned_cols=246 Identities=8% Similarity=-0.040 Sum_probs=141.7
Q ss_pred CeeEEEEcC-CCCeEEEEeC-CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEe-------cCCCCEEEEEeCCC-
Q 016257 65 DPMTIAVNP-SGDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSF-------SVDGSRFAAGGVDG- 134 (392)
Q Consensus 65 ~v~~~~~sp-~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~~~~~l~~~~~dg- 134 (392)
....|+|+| +...|+.+.. .+.|++.|++++... .+..... ........++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-~l~~~~~---~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-SPLNINT---IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-EEECCTT---SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-EEEccCc---cccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 467899998 3555555444 356777777665533 2221110 12235799999 99999777766543
Q ss_pred ------cEEEEeCCC-Ccee-----ecccCCCCcEEEEEecCCC-CeEEEEcCCCcEEEEECC-------CCee------
Q 016257 135 ------HLRIMHWPS-LRII-----LDEPKAHKSVLDMDFSLDS-EFLATTSTDGSARIWKTE-------DGVA------ 188 (392)
Q Consensus 135 ------~i~i~d~~~-~~~~-----~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~vwd~~-------~~~~------ 188 (392)
.|.+++... ++.. ..+. .-.....++++|++ .++++-..++.|..+|+. ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 266665333 1211 1111 11244577889954 445566677889999987 4543
Q ss_pred -----eEE-EecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCC--Cceee--eeeccc---C-----------
Q 016257 189 -----WTF-LTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIS--TWNKI--GHKRLL---R----------- 244 (392)
Q Consensus 189 -----~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~--~~~~~--~~~~~~---~----------- 244 (392)
... +........+.++|+|++..+ .++-.....|+.++.. .+... ..+.+. .
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~l----YvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~ 370 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYA----YFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEAR 370 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEE----EEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCB
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEE----EEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccc
Confidence 112 222223356899999999853 3555677888886543 32210 111110 0
Q ss_pred -CCcE-EEEEC-------CCCCEEEEEeCCCcEEEEecCCceeeeeeec------------ccc---------CcceEEE
Q 016257 245 -KPAS-VLSIS-------LDGKYLAMGSKDGDICVVDVKKMEINHWSKR------------LHL---------GTSIALV 294 (392)
Q Consensus 245 -~~v~-~~~~s-------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------~~~---------~~~i~~~ 294 (392)
.... .++.. ++|.+.++-..+.+|+.++ .++........ +.. -.....|
T Consensus 371 f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gI 449 (496)
T 3kya_A 371 MNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGL 449 (496)
T ss_dssp CSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEE
T ss_pred cCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEE
Confidence 1233 44554 4566666666778899998 45554333221 100 1247789
Q ss_pred EEeeC-CCeEEEEeCCCeEEEEEeecC
Q 016257 295 EFCPT-QRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 295 ~~s~~-~~~l~~~~~dg~i~iw~~~~~ 320 (392)
+++++ |.++++=.....|+.+++...
T Consensus 450 avd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 450 VYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred EEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 99996 666666666788888887644
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.50 E-value=0.00053 Score=60.76 Aligned_cols=209 Identities=7% Similarity=-0.088 Sum_probs=128.2
Q ss_pred CCCCeeEEEEcCCCCeEEEEe-CCCeEEEEEEeCCc---cceeeccccCCCCCCCCCeEEEEecCCCCEEE-EEeCCCcE
Q 016257 62 SEGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGA---TDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHL 136 (392)
Q Consensus 62 h~~~v~~~~~sp~~~~l~~~~-~d~~i~iw~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i 136 (392)
....+..++|++.+..|+.+. ..+.|+.+++.... ........ .......+++.+.+..|+ +-...+.|
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~------~~~~p~glavD~~~~~lY~~d~~~~~I 183 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR------DIQAPDGLAVDWIHSNIYWTDSVLGTV 183 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS------SCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC------CCCCcccEEEEecCCceEEEECCCCeE
Confidence 356789999998766666554 56778888876522 11111110 224568899988444554 44557889
Q ss_pred EEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcC--CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceE
Q 016257 137 RIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214 (392)
Q Consensus 137 ~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 214 (392)
.+.+++.................|+++|.+..|+.+.. .+.|...++.... ...+....-.....+++++++..+|
T Consensus 184 ~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~-~~~~~~~~l~~P~glavd~~~~~lY- 261 (400)
T 3p5b_L 184 SVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLY- 261 (400)
T ss_dssp EEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEE-
T ss_pred EEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc-cEEEEECCCCceEEEEEEeCCCEEE-
Confidence 99998765443333333346789999997666665542 3689999886433 3333222223678999999887643
Q ss_pred EEEEEeCCccEEEEEeCCCceeeeeecc--cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 215 FCTVQRGDKALLAVYDISTWNKIGHKRL--LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 215 ~~~~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
++-...+.|..+|+........... .-.....+++. .+.++++-...+.|..+|..+++....+
T Consensus 262 ---~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 262 ---WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp ---EEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred ---EEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 4556678999999875433222221 12334566663 3345555556788999997777766555
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.47 E-value=8.5e-05 Score=63.59 Aligned_cols=227 Identities=7% Similarity=-0.089 Sum_probs=132.6
Q ss_pred EEEEEeCCCcEEEEeCCCCce-eecccCCCCcEEEEEecCCCCeEE-EEcCCCcEEEEECCCCeeeE-EEecCCCcceEE
Q 016257 126 RFAAGGVDGHLRIMHWPSLRI-ILDEPKAHKSVLDMDFSLDSEFLA-TTSTDGSARIWKTEDGVAWT-FLTRNSDEKIEL 202 (392)
Q Consensus 126 ~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~i~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~v~~ 202 (392)
+|+.+. ...|+..++..... .............++|++.+..|+ +-...+.|..+++..+.... .+.... .....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l-~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL-LSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC-SCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC-CCccE
Confidence 344433 56789999876531 111112223567899998655544 54566889999987653222 222222 24678
Q ss_pred EEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe--CCCcEEEEecCCceeee
Q 016257 203 CRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS--KDGDICVVDVKKMEINH 280 (392)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~ 280 (392)
+++.+.+..+ .++-...+.|.++++..................+++.|.+..|+... ..+.|...++.......
T Consensus 84 lavd~~~g~l----y~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 84 LACDWLGEKL----YWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp EEEETTTTEE----EEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EEEEcCCCeE----EEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 9999866653 35556678999999875433222223334678999999766666655 25778888886543322
Q ss_pred eeeccccCcceEEEEEeeCCCeEEEEe-CCCeEEEEEeecCcccccee-eeeeeeeeeeeceEEEEee-ecceeeeeccc
Q 016257 281 WSKRLHLGTSIALVEFCPTQRVVLTAS-KEWGAMITKLTVPADWKEWQ-IYSLLLALFLASAVVFYIF-FENSDSFWNFP 357 (392)
Q Consensus 281 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~d~~i~~W~~~ 357 (392)
.. ... -.....+++++++..|+.+. ..+.|..+++.......... ....+.+.......++.+- ..+.|...+..
T Consensus 160 ~~-~~~-l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 160 II-NSE-IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EE-CSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EE-ECC-CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECC
Confidence 22 122 34678999999776665554 46788888876432211111 1223444444444444443 34567777765
Q ss_pred ccc
Q 016257 358 VAR 360 (392)
Q Consensus 358 ~~~ 360 (392)
+|+
T Consensus 238 ~G~ 240 (318)
T 3sov_A 238 TGE 240 (318)
T ss_dssp TCC
T ss_pred CCC
Confidence 554
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.45 E-value=0.00034 Score=59.08 Aligned_cols=196 Identities=8% Similarity=-0.040 Sum_probs=120.5
Q ss_pred CeEEEEecCCCCEEEEEe-CCCcEEEEeCCCCceeecccCC-----C--CcEEEEEe---cCCCCeEEEEc---------
Q 016257 114 PQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRIILDEPKA-----H--KSVLDMDF---SLDSEFLATTS--------- 173 (392)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~-----~--~~i~~i~~---~~~~~~l~~~~--------- 173 (392)
...+++|.+....|..++ ..++|..|+...+......... . ..+..+.| .|+++++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 346789988656666666 7899999998755432222221 1 14689999 68877777543
Q ss_pred ----CCCcEEEEECC---CCeeeEEEecC------------CCcceEEEEecCCCCcceEEEEEEeCCc-cEEEEEeCCC
Q 016257 174 ----TDGSARIWKTE---DGVAWTFLTRN------------SDEKIELCRFSKDGTKPFLFCTVQRGDK-ALLAVYDIST 233 (392)
Q Consensus 174 ----~d~~i~vwd~~---~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~d-~~i~v~d~~~ 233 (392)
.+..+..+|+. +++.+...... .......++..++|+. .++++.. +.|...+...
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna-----YVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS-----YVAFALGMPAIARVSADG 168 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE-----EEEEEESSCEEEEECTTS
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE-----EEeCCCCCCeEEEEeCCC
Confidence 25779999998 77766554311 1124788999999985 3445555 6777777664
Q ss_pred ceeeeeec------ccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeec---cc--cCcceEEE-EEeeCCC
Q 016257 234 WNKIGHKR------LLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKR---LH--LGTSIALV-EFCPTQR 301 (392)
Q Consensus 234 ~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~--~~~~i~~~-~~s~~~~ 301 (392)
... ..+. ......+.++++|+|+.|++....|.|..+|+.+.... .+.. +. .......+ .--.+|+
T Consensus 169 ~~~-~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~-~v~~~~~G~~~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 169 KTV-STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW-PEPVKINGDFGTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp CCE-EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC-CEECEESSCCCCCTTEEEEEEEEETTE
T ss_pred CEE-eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce-eecccccCCcccccCcccccccccCCE
Confidence 322 2111 11224668999999998888877999999998853220 1111 11 01223443 4445788
Q ss_pred e-EEEEeCCCeEEEEE
Q 016257 302 V-VLTASKEWGAMITK 316 (392)
Q Consensus 302 ~-l~~~~~dg~i~iw~ 316 (392)
. |++.+..+.+.+.+
T Consensus 247 vllV~~~~~~~~~l~S 262 (334)
T 2p9w_A 247 SVLVGARAPYAISFRS 262 (334)
T ss_dssp EEEEEEETTEEEEEEC
T ss_pred EEEEEcCCCCEEEEEC
Confidence 7 55555565444433
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.40 E-value=0.00045 Score=60.09 Aligned_cols=232 Identities=13% Similarity=0.091 Sum_probs=122.4
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC---CCEEEEEeC-C-----
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGGV-D----- 133 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~-d----- 133 (392)
-.....++|.|+|++++ +...+.|++++ +++. ..+.... ...........++|+|+ +..|+++.. .
T Consensus 30 l~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~-~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLI-AERPGRIRLFR--EGRL-STYAELS-VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSCEEE-EETTTEEEEEE--TTEE-EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCc-cEeecce-EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 44688999999998554 46779898888 3331 1111111 11123457899999998 556655443 2
Q ss_pred CcEEEEeCCCCc-----eeec-cc---CCCCcEEEEEecCCCCeEEEEcCC-------------CcEEEEECCCC-----
Q 016257 134 GHLRIMHWPSLR-----IILD-EP---KAHKSVLDMDFSLDSEFLATTSTD-------------GSARIWKTEDG----- 186 (392)
Q Consensus 134 g~i~i~d~~~~~-----~~~~-~~---~~~~~i~~i~~~~~~~~l~~~~~d-------------~~i~vwd~~~~----- 186 (392)
+.|..++...++ .+.. +. ........++|.|||.++++.+.. +.|.-++....
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 567778776431 1211 22 111134689999999766654321 45555554320
Q ss_pred -------eeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCcc-------EEEEEeCCC----------------cee
Q 016257 187 -------VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA-------LLAVYDIST----------------WNK 236 (392)
Q Consensus 187 -------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~-------~i~v~d~~~----------------~~~ 236 (392)
.....+..... ....++|+|+...++ +.-.+.+. .|.+..... ..+
T Consensus 185 pf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~---v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p 260 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELF---SSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDP 260 (352)
T ss_dssp TTTTCTTSCTTEEEECCS-EECCCEECTTTCCEE---EEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCC
T ss_pred cccCCCCCCccEEEEcCC-CcccEEEECCCCCEE---EEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCC
Confidence 11122222233 367789999444322 22222222 243332111 001
Q ss_pred eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCcee------eeeeeccccCcceEEEEEeeCCCeEEEEe
Q 016257 237 IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEI------NHWSKRLHLGTSIALVEFCPTQRVVLTAS 307 (392)
Q Consensus 237 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 307 (392)
+..+ ........++| .+|.++++.-..+.|...+++.... ...+. .. ...+..+++.|||.++++..
T Consensus 261 ~~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~-~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 261 LYFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SG-FGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp SEEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ES-SCCEEEEEECTTSCEEEEEC
T ss_pred eEec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec-cc-CCCeeEEEECCCCcEEEEEe
Confidence 1111 11224456777 4666666555667788877764321 11111 12 45789999999998666654
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.38 E-value=0.00065 Score=65.38 Aligned_cols=227 Identities=9% Similarity=-0.061 Sum_probs=130.0
Q ss_pred eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE-eCCCcEEEEeCCCC----ceeeccc
Q 016257 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMHWPSL----RIILDEP 151 (392)
Q Consensus 77 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~----~~~~~~~ 151 (392)
+|+.+... .|+..++....... +. .....+..++|.+....|+.. ...+.|+.+++... .....+.
T Consensus 397 ~Ll~an~~-~Ir~i~l~~~~~~~-l~-------~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~ 467 (791)
T 3m0c_C 397 YLFFTNRH-EVRKMTLDRSEYTS-LI-------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 467 (791)
T ss_dssp EEEEECBS-SEEEECTTSCCCEE-EE-------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred cccccccc-ceeEeeccCCccee-ee-------cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe
Confidence 44444433 36666665443211 11 123467899999865555554 45677888888642 1122222
Q ss_pred CCCCcEEEEEecCCCCeEE-EEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEe
Q 016257 152 KAHKSVLDMDFSLDSEFLA-TTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYD 230 (392)
Q Consensus 152 ~~~~~i~~i~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d 230 (392)
........|++.+.++.|+ +-...+.|.+.++.... ...+..........|+++|.+..+| ..-.+..+.|...+
T Consensus 468 ~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LY---wtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMY---WTDWGTPAKIKKGG 543 (791)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEE---EEECSSSCEEEEEE
T ss_pred cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEE---EecCCCCCeEEEEe
Confidence 2334567899988775554 45567889999986544 3444333333588999999877633 12223347899999
Q ss_pred CCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCC
Q 016257 231 ISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKE 309 (392)
Q Consensus 231 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 309 (392)
+............-.....|++++.+..|+.+. ..+.|..+++..............-.....|++.. +.++++-...
T Consensus 544 ~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~ 622 (791)
T 3m0c_C 544 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 622 (791)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTT
T ss_pred cCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCC
Confidence 876544333333335678999998777776664 45679999987655444332111022345666632 2333344445
Q ss_pred CeEEEEEe
Q 016257 310 WGAMITKL 317 (392)
Q Consensus 310 g~i~iw~~ 317 (392)
+.|...+.
T Consensus 623 ~~I~~~dk 630 (791)
T 3m0c_C 623 EAIFSANR 630 (791)
T ss_dssp TEEEEEET
T ss_pred CEEEEEeC
Confidence 66665553
No 289
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.34 E-value=0.00024 Score=60.54 Aligned_cols=191 Identities=14% Similarity=0.192 Sum_probs=120.0
Q ss_pred CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC----CCE--EEEEe--C--CCcEEEEeCC-
Q 016257 74 SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD----GSR--FAAGG--V--DGHLRIMHWP- 142 (392)
Q Consensus 74 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~--l~~~~--~--dg~i~i~d~~- 142 (392)
...+++.....+-+.+||+ +++....+. .+.++.+..-|+ |+. ++.++ . +++|.+|++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~---------~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp 108 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYN---------TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG 108 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEEC---------CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEcc---------CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC
Confidence 3345666677778999999 555444332 145666666552 222 33333 3 5789999773
Q ss_pred -CCceeecccC------CC-CcEEEEEe--cCC-CC-eEEEEcCCCcEEEEECC-------CCeeeEEEecCCCcceEEE
Q 016257 143 -SLRIILDEPK------AH-KSVLDMDF--SLD-SE-FLATTSTDGSARIWKTE-------DGVAWTFLTRNSDEKIELC 203 (392)
Q Consensus 143 -~~~~~~~~~~------~~-~~i~~i~~--~~~-~~-~l~~~~~d~~i~vwd~~-------~~~~~~~~~~~~~~~v~~~ 203 (392)
+++ +..... .. ..+..+++ +|. ++ ++++...+|.+..|++. +.+.++++... ..+..|
T Consensus 109 ~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--sq~Egc 185 (355)
T 3amr_A 109 KNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--SQTEGM 185 (355)
T ss_dssp TTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS--SCEEEE
T ss_pred CCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC--CCcceE
Confidence 333 322311 11 45677777 774 44 57788889999999883 33556676654 368899
Q ss_pred EecCCCCcceEEEEEEeCCccEEEEEeCC-----Cceeeeeec--ccCCCcEEEEE--CCCCC-EEEEEe-CCCcEEEEe
Q 016257 204 RFSKDGTKPFLFCTVQRGDKALLAVYDIS-----TWNKIGHKR--LLRKPASVLSI--SLDGK-YLAMGS-KDGDICVVD 272 (392)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~i~v~d~~-----~~~~~~~~~--~~~~~v~~~~~--s~~~~-~l~~~~-~dg~i~iwd 272 (392)
+..+.... ++.+.++.-|..||.+ +.+.+.... .....+..+++ .++++ +|++++ .++++.+||
T Consensus 186 vvDd~~g~-----Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 186 AADDEYGR-----LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EEETTTTE-----EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred EEcCCCCe-----EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 99988776 6777787777777755 234443332 12246788888 45565 666666 567899999
Q ss_pred cC-Cceeeeee
Q 016257 273 VK-KMEINHWS 282 (392)
Q Consensus 273 ~~-~~~~~~~~ 282 (392)
.+ +.+.+..+
T Consensus 261 r~~~~~~vg~f 271 (355)
T 3amr_A 261 RQGKNKYVADF 271 (355)
T ss_dssp SSTTCCEEEEE
T ss_pred CCCCCcEEEEE
Confidence 96 55555444
No 290
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.33 E-value=0.0012 Score=57.39 Aligned_cols=234 Identities=12% Similarity=0.020 Sum_probs=125.6
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC---CCEEEEEeC----C--
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGGV----D-- 133 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~----d-- 133 (392)
-.....++|.|+|++ +++..++.|++++ .+++ ..+.... ...........++++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~pdG~l-~V~e~~g~I~~~d-~~G~--~~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRY-LVTERPGRLVLIS-PSGK--KLVASFD-VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETTEE-EEEETTTEEEEEC-SSCE--EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCCeE-EEEeCCCEEEEEe-CCCc--eEeeccc-eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 456889999999974 4456779898886 3333 1111101 01112356899999997 555555443 2
Q ss_pred --CcEEEEeCCCC-------ceeec-ccCC-CCcEEEEEecCCCCeEEEEcC-------------CCcEEEEECCCCe--
Q 016257 134 --GHLRIMHWPSL-------RIILD-EPKA-HKSVLDMDFSLDSEFLATTST-------------DGSARIWKTEDGV-- 187 (392)
Q Consensus 134 --g~i~i~d~~~~-------~~~~~-~~~~-~~~i~~i~~~~~~~~l~~~~~-------------d~~i~vwd~~~~~-- 187 (392)
..|..++.... +.+.. +... ......++|.|||.++++.+. .|.|.-++.. ++
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p 181 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPP 181 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCC
Confidence 56777776543 11111 1111 113467999999987666432 1345555543 22
Q ss_pred ------eeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc--cEEEEEeCCC--------c--------eeeeeeccc
Q 016257 188 ------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK--ALLAVYDIST--------W--------NKIGHKRLL 243 (392)
Q Consensus 188 ------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d--~~i~v~d~~~--------~--------~~~~~~~~~ 243 (392)
....+..... ....++|+|+...++ +.-.+.+ ..|.+...-. + .++..+...
T Consensus 182 ~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~---v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 257 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHR-NPQGIDWHRASGVMV---ATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSE 257 (354)
T ss_dssp TTSSSTTCCEEEECCS-CCCEEEECTTTCCEE---EEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCCCCCCcEEEEccC-CcceEEEeCCCCCEE---EEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCC
Confidence 1122222333 356899999433322 1222222 2233322110 0 111112112
Q ss_pred CCCcEEEEEC-------CCCCEEEEEeCCCcEEEEecCCc-eee--eeeeccccCcceEEEEEeeCCCeEEEEe
Q 016257 244 RKPASVLSIS-------LDGKYLAMGSKDGDICVVDVKKM-EIN--HWSKRLHLGTSIALVEFCPTQRVVLTAS 307 (392)
Q Consensus 244 ~~~v~~~~~s-------~~~~~l~~~~~dg~i~iwd~~~~-~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 307 (392)
......++|. .+|.++++.-..+.|...++... +.. ..+.... ...+..+++.|||.++++..
T Consensus 258 ~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 258 TWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNV-FGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTT-SCCEEEEEECTTSCEEEEEC
T ss_pred CcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCC-CCCeeEEEECCCCcEEEEEe
Confidence 3456778884 46777776666778988888753 322 1221222 45789999999998666654
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.27 E-value=0.0016 Score=56.04 Aligned_cols=273 Identities=11% Similarity=0.064 Sum_probs=142.6
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 142 (392)
...+.++.|.+++..+++ +..+.| |....+....+...... ......+.++.|.+ +..++ ++..+.|.. ...
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i--~~s~DgG~tW~~~~~~~--~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~D 106 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL--METRDGGQTWEPRTLVL--DHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTD 106 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE--EEESSTTSSCEECCCCC--SCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE--EEeCCCCCCCeECCCCC--CCCCccEEEEEecC-CeEEE-EECCCeEEE-ECC
Confidence 457899999877777775 456644 33333322222211100 01234688899976 44444 455664443 223
Q ss_pred CCceeeccc---CCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEE
Q 016257 143 SLRIILDEP---KAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQ 219 (392)
Q Consensus 143 ~~~~~~~~~---~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 219 (392)
.++.-.... .....+..+.+.+++..++.+. ++.|.. ....++.-..........+..+++.+++.. ++.
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~-----~~~ 179 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEY-----VAV 179 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCE-----EEE
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcE-----EEE
Confidence 333221111 1224577888877776666554 554432 222344444444344446889999998774 344
Q ss_pred eCCccEEEEEeC--CCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecc--ccCcceEEEE
Q 016257 220 RGDKALLAVYDI--STWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRL--HLGTSIALVE 295 (392)
Q Consensus 220 ~~~d~~i~v~d~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~ 295 (392)
+...+..+-.|- .+.+.+. ......+..+.+.+++..++. +.+|.+++.+...++.-..+... .....+..++
T Consensus 180 g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~ 256 (327)
T 2xbg_A 180 SSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLA 256 (327)
T ss_dssp ETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEE
T ss_pred ECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEE
Confidence 444444444453 3444432 233567888999999876654 45787777643334433322211 1034588999
Q ss_pred EeeCCCeEEEEeCCCeEEEEEeecCccccceee----eeeeeee-eeeceEEEEeeecceeeeec
Q 016257 296 FCPTQRVVLTASKEWGAMITKLTVPADWKEWQI----YSLLLAL-FLASAVVFYIFFENSDSFWN 355 (392)
Q Consensus 296 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~d~~i~~W~ 355 (392)
+.+++..++++ .+|.+ .+..+.+..+..... ....... +.....++.++.+|.|.-++
T Consensus 257 ~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 257 YRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp ESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred ecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 99887766655 46666 333333333221110 0000111 12345566677777665554
No 292
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.25 E-value=6.3e-05 Score=67.43 Aligned_cols=155 Identities=8% Similarity=0.042 Sum_probs=99.1
Q ss_pred cEEEEEecC-CCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCC----ccEEEEEe
Q 016257 156 SVLDMDFSL-DSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD----KALLAVYD 230 (392)
Q Consensus 156 ~i~~i~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----d~~i~v~d 230 (392)
....++++| ++..|+.+...+.|+.+|+..++...... .......++|++++..+| ++... ...+..++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~ly----vad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMI----ITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEE----EEECCSCTTSEEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEE----EEeCCCCcccceEEEEe
Confidence 457889998 45666666655889999997765443332 233588999999998632 33221 22344444
Q ss_pred CCCceee--eeecccCCCcEEEEECC-CCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeE-EEE
Q 016257 231 ISTWNKI--GHKRLLRKPASVLSISL-DGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVV-LTA 306 (392)
Q Consensus 231 ~~~~~~~--~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~ 306 (392)
.. +... ..+.. ......++++| +|.++++-..++.|..++..++.......... ......++|+|+|++| ++-
T Consensus 212 ~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 212 RE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp GG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEE
T ss_pred CC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEE
Confidence 33 2211 11211 23456788999 67766666677899999998776533332222 3457899999999955 444
Q ss_pred eCCCeEEEEEeec
Q 016257 307 SKEWGAMITKLTV 319 (392)
Q Consensus 307 ~~dg~i~iw~~~~ 319 (392)
...+.|..++...
T Consensus 289 ~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 289 VNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEEET
T ss_pred CCCCEEEEEeCCc
Confidence 5678898888764
No 293
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.22 E-value=0.0022 Score=55.68 Aligned_cols=245 Identities=11% Similarity=0.058 Sum_probs=127.4
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC---CCEEEEEeC--------
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAGGV-------- 132 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~-------- 132 (392)
.....|+|.|+|+.|+++...|.|++++. .+.....+................++++|+ +..|+....
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 46789999999984445567898888873 222111111100001122356789999996 555555432
Q ss_pred CCcEEEEeCCCCc-------eee-cccC---CCCcEEEEEecCCCCeEEEEcC-------------CCcEEEEECCCCe-
Q 016257 133 DGHLRIMHWPSLR-------IIL-DEPK---AHKSVLDMDFSLDSEFLATTST-------------DGSARIWKTEDGV- 187 (392)
Q Consensus 133 dg~i~i~d~~~~~-------~~~-~~~~---~~~~i~~i~~~~~~~~l~~~~~-------------d~~i~vwd~~~~~- 187 (392)
...|..+++.... .+. .+.. ....-..++|.|||.++++.+. .|.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 2346666664321 111 1111 1112457999999966655433 2456666654220
Q ss_pred -----------eeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc--cEEEEEeCCCcee------------------
Q 016257 188 -----------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK--ALLAVYDISTWNK------------------ 236 (392)
Q Consensus 188 -----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d--~~i~v~d~~~~~~------------------ 236 (392)
....+...+. ....++|+|....++ +.-.+.+ ..|.+ +..+..
T Consensus 177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~---~~d~g~~~~dei~~--i~~G~nyGwp~~~~~~~~~~~~~~ 250 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALW---LNEHGPRGGDEINI--PQKGKNYGWPLATWGINYSGFKIP 250 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEE---EEEECSBSCEEEEC--CCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEE---EEecCCCCCcEEeE--eccCCcCCCCCccCCCCCCCCccC
Confidence 1222333333 478899999433322 1222222 12222 111110
Q ss_pred -------------eeeecccCCCcEEEEECC-------CCCEEEEEeCCCcEEEEecCCceeeeee--eccccCcceEEE
Q 016257 237 -------------IGHKRLLRKPASVLSISL-------DGKYLAMGSKDGDICVVDVKKMEINHWS--KRLHLGTSIALV 294 (392)
Q Consensus 237 -------------~~~~~~~~~~v~~~~~s~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~i~~~ 294 (392)
+..+ .+......++|.. +|+++++.-..+.|...++..++..... .... ...+..+
T Consensus 251 ~~~~~~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~rp~~v 328 (353)
T 2g8s_A 251 EAKGEIVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDR-GQRIRDV 328 (353)
T ss_dssp TCCBSSCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGG-CCCEEEE
T ss_pred cccCCCCCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCC-CCceeEE
Confidence 0001 1123456677764 4667776667788888888766543221 1122 3579999
Q ss_pred EEeeCCCeEEEEeCCCeEEEEEee
Q 016257 295 EFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 295 ~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
++.|||.++++.. +..=+||.+.
T Consensus 329 ~~~pdG~lyv~td-~~~g~I~ri~ 351 (353)
T 2g8s_A 329 RTGPDGYLYVLTD-ESSGELLKVS 351 (353)
T ss_dssp EECTTSCEEEEEC-STTEEEEEEE
T ss_pred EECCCCcEEEEEe-CCCCEEEEEe
Confidence 9999998665543 2223556554
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.21 E-value=0.002 Score=62.12 Aligned_cols=187 Identities=6% Similarity=-0.104 Sum_probs=117.2
Q ss_pred EEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEE-EEcCCCcEEEEECCCCe---eeEEEecCCCcceE
Q 016257 126 RFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLA-TTSTDGSARIWKTEDGV---AWTFLTRNSDEKIE 201 (392)
Q Consensus 126 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~v~ 201 (392)
+|+.+ ....|+..++....... +......+..++|++....|+ +-...+.|+.+++.... ....+.........
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccccc-cccceeEeeccCCccee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 44443 34668888887654432 233345678999998555554 44556789989886531 12222221223567
Q ss_pred EEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeC-C-CcEEEEecCCceee
Q 016257 202 LCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSK-D-GDICVVDVKKMEIN 279 (392)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-g~i~iwd~~~~~~~ 279 (392)
.|++.+.+..+ .++-...+.|.+.++..................|+++|.+.+|+.... + +.|...++......
T Consensus 475 GLAvD~~~~~L----Y~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 475 GLAVDWIHSNI----YWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp EEEEETTTTEE----EEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred eeeeeecCCcE----EEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 89999888763 356667889999999865443333333456789999998666666542 2 67999998765544
Q ss_pred eeeeccccCcceEEEEEeeCCCeEEEEe-CCCeEEEEEeecC
Q 016257 280 HWSKRLHLGTSIALVEFCPTQRVVLTAS-KEWGAMITKLTVP 320 (392)
Q Consensus 280 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~ 320 (392)
..+ ... -.....|++++.+..|+.+. ..+.|...++...
T Consensus 551 ~lv-~~~-l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 551 SLV-TEN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp EEE-CSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEE-eCC-CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 433 222 45789999998777666664 4467777776543
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.18 E-value=0.00049 Score=61.62 Aligned_cols=196 Identities=11% Similarity=0.077 Sum_probs=115.5
Q ss_pred CeEEEEecCC--CCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCC---C-cEEEEECCCCe
Q 016257 114 PQKCLSFSVD--GSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTD---G-SARIWKTEDGV 187 (392)
Q Consensus 114 ~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---~-~i~vwd~~~~~ 187 (392)
....++|+|+ ...|+.+...+.|+.++..+++... +.........++++++++++++.... . .+...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4678999984 4456666555889999988776543 33344568899999999944443321 1 13333322211
Q ss_pred e-eEEEecCCCcceEEEEecC-CCCcceEEEEEEeCCccEEEEEeCCCceeeeee-cc-cCCCcEEEEECCCCCEEEEEe
Q 016257 188 A-WTFLTRNSDEKIELCRFSK-DGTKPFLFCTVQRGDKALLAVYDISTWNKIGHK-RL-LRKPASVLSISLDGKYLAMGS 263 (392)
Q Consensus 188 ~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~ 263 (392)
. ...+. . ......++++| ++.. .++...++.|+.+|..++.....+ .. ....-..++++|++++|+.+.
T Consensus 219 ~~~~~~~-~-~~~P~giavd~~~G~l-----yv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 219 TERLSLC-N-ARGAKTCAVHPQNGKI-----YYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp CCEEEEE-E-CSSBCCCEECTTTCCE-----EECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred ecccccc-c-cCCCCEEEEeCCCCeE-----EEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 1 01121 1 12456788999 5552 345556789999999866552222 11 122334699999999666554
Q ss_pred -CCCcEEEEecC--Cceee--eee-ec----cc--------cCcceEEEEE---------eeCCCeEEEEeCCCeEEEEE
Q 016257 264 -KDGDICVVDVK--KMEIN--HWS-KR----LH--------LGTSIALVEF---------CPTQRVVLTASKEWGAMITK 316 (392)
Q Consensus 264 -~dg~i~iwd~~--~~~~~--~~~-~~----~~--------~~~~i~~~~~---------s~~~~~l~~~~~dg~i~iw~ 316 (392)
..+.|+.++.. ++... ..+ .. +. .-.....+++ .++|.++++-...+.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 56789998865 23211 111 00 00 0124677999 66777666666677888776
Q ss_pred e
Q 016257 317 L 317 (392)
Q Consensus 317 ~ 317 (392)
.
T Consensus 372 ~ 372 (433)
T 4hw6_A 372 P 372 (433)
T ss_dssp T
T ss_pred C
Confidence 3
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.16 E-value=4.6e-05 Score=72.68 Aligned_cols=207 Identities=7% Similarity=-0.081 Sum_probs=121.4
Q ss_pred CCeeEEEEcCCCCeEEEEe-CCCeEEEEEEeCC---ccceeeccccCCCCCCCCCeEEEEecCCCCEEE-EEeCCCcEEE
Q 016257 64 GDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGG---ATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFA-AGGVDGHLRI 138 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~-~d~~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i 138 (392)
..+..++|++.+..|+.+. ..+.|+.+++... .....+.. ........+++.+.+..|+ +-...+.|.+
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~------~~~~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC------SCC--CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe------CCCCCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 4577899998777776654 4567888887651 11111110 0112346688886444444 4345688999
Q ss_pred EeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcC--CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEE
Q 016257 139 MHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFC 216 (392)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 216 (392)
+++..................++++|.+.+|+.+.. .+.|..+++... ....+....-.....|+|+|++..+|
T Consensus 480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY--- 555 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLY--- 555 (699)
T ss_dssp EBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEE---
T ss_pred EecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEE---
Confidence 998755433222222335678899997666665543 267888877533 22233222223467899999877643
Q ss_pred EEEeCCccEEEEEeCCCceeeeeecc--cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 217 TVQRGDKALLAVYDISTWNKIGHKRL--LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 217 ~~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
++-...+.|..+|+........... .......+++..+ .++++....+.|..+|..+++....+
T Consensus 556 -~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 556 -WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp -EEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred -EEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 4556678999999975332222211 1122334555443 44445556688999998888877665
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.14 E-value=0.0015 Score=61.33 Aligned_cols=205 Identities=9% Similarity=-0.075 Sum_probs=121.8
Q ss_pred CCCeeEEEEcCCCCeEEEEe-CCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEE-eCCCcEEEEe
Q 016257 63 EGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAG-GVDGHLRIMH 140 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d 140 (392)
-..+..++|++.+..|+.+. ..+.|..+++............ .-.....+++.+.+..|+.+ ...+.|.+.+
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~------~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~ 112 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS------GLLSPDGLACDWLGEKLYWTDSETNRIEVSN 112 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeC------CCCCcCeEEEEecCCEEEEEeCCCCEEEEEE
Confidence 45688999999777776654 4567888887654211122111 12467899999866656555 4568899999
Q ss_pred CCCCceeecccCCCCcEEEEEecCCCCeEEEEcC--CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEE
Q 016257 141 WPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST--DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
+............-.....|+++|.+..|+.+.. .+.|...++. +.....+....-.....+++++++..+| .
T Consensus 113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY----~ 187 (619)
T 3s94_A 113 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLY----W 187 (619)
T ss_dssp TTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSSEEEEEEETTTTEEE----E
T ss_pred CCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEEEEeCCCCCCcEEEEEccCCEEE----E
Confidence 8754432222233345778999997666665543 3567777775 3333333322233678999999877643 4
Q ss_pred EeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceee
Q 016257 219 QRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEIN 279 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 279 (392)
+-...+.|..+|+..................+++..+ ...++-...+.|...|..+++..
T Consensus 188 aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 188 ADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp EETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred EeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCccc
Confidence 4566788999998764433222211222345677655 44444446778999998777544
No 298
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.13 E-value=0.0014 Score=55.29 Aligned_cols=208 Identities=11% Similarity=0.049 Sum_probs=124.5
Q ss_pred EeeCCCCCeeEEEEcCCCCeEEEEe-CCCeEEEEEEeCCccceeeccccCCCC----CCCCCeEEEEe---cCCCCEEEE
Q 016257 58 VFDESEGDPMTIAVNPSGDDFVCST-TNGGCKLFEVYGGATDINLLAKKMPPL----QDAGPQKCLSF---SVDGSRFAA 129 (392)
Q Consensus 58 ~~~~h~~~v~~~~~sp~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~---s~~~~~l~~ 129 (392)
.+....--..+++|++....|+.++ ..++|..|+...+... ... .+.. .....+..+.| .|+++++++
T Consensus 7 ~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~-~~~---~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv 82 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHF-NVV---IDGASSNGDGEQQMSGLSLLTHDNSKRLFAV 82 (334)
T ss_dssp EECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEE-EEC---CTTTCCSSCCSEEEEEEEESSSSSCCEEEEE
T ss_pred EecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEE-EEe---cCCccccCCCcceeeEEEEeccCCCCcEEEE
Confidence 3444555677899988666666666 7899999998644322 111 1111 11124589999 688777775
Q ss_pred Ee-------------CCCcEEEEeCC---CCceeeccc--C-----------CCCcEEEEEecCCCCeEEEEcCC-CcEE
Q 016257 130 GG-------------VDGHLRIMHWP---SLRIILDEP--K-----------AHKSVLDMDFSLDSEFLATTSTD-GSAR 179 (392)
Q Consensus 130 ~~-------------~dg~i~i~d~~---~~~~~~~~~--~-----------~~~~i~~i~~~~~~~~l~~~~~d-~~i~ 179 (392)
.. .+..+..||+. +++.+.... . ......+++..++|+..++++.. +.|.
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~ 162 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIA 162 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEE
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEE
Confidence 43 25779999998 776543221 0 11258899999999999988887 7777
Q ss_pred EEECCCCeeeEEEecCC-----CcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee--eeeec-c---cCCCcE
Q 016257 180 IWKTEDGVAWTFLTRNS-----DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK--IGHKR-L---LRKPAS 248 (392)
Q Consensus 180 vwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~--~~~~~-~---~~~~v~ 248 (392)
..+.... ....+.... ....+.++++|++.. ++.....+.|..+|++.... +.... + .-....
T Consensus 163 rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~-----Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~d 236 (334)
T 2p9w_A 163 RVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNK-----LIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTE 236 (334)
T ss_dssp EECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTE-----EEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEE
T ss_pred EEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCE-----EEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcc
Confidence 7776433 333332111 112568999999986 44444499999999885322 11110 1 111233
Q ss_pred EE-EECCCCCE-EEEEeCCCcEEEEecCC
Q 016257 249 VL-SISLDGKY-LAMGSKDGDICVVDVKK 275 (392)
Q Consensus 249 ~~-~~s~~~~~-l~~~~~dg~i~iwd~~~ 275 (392)
.+ ..-.+|+. +++....+.+.+.+.+.
T Consensus 237 gilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 237 KIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred cccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 33 33346766 44444455555555444
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.12 E-value=2.9e-05 Score=74.02 Aligned_cols=200 Identities=11% Similarity=-0.072 Sum_probs=113.6
Q ss_pred CCeEEEEecCCCCEEEEEe-CCCcEEEEeCCC----CceeecccCCCCcEEEEEecCCCCeE-EEEcCCCcEEEEECCCC
Q 016257 113 GPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPS----LRIILDEPKAHKSVLDMDFSLDSEFL-ATTSTDGSARIWKTEDG 186 (392)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~----~~~~~~~~~~~~~i~~i~~~~~~~~l-~~~~~d~~i~vwd~~~~ 186 (392)
..+..++|.+.+..|+.+. ..+.|+.+++.. ......+.........|++.+.+..| ++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 4567889998776776654 457899999875 22221121122245678888655444 44455688999998654
Q ss_pred eeeEEEecCCCcceEEEEecCCCCcceEEEEEEe-CCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEE-eC
Q 016257 187 VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR-GDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMG-SK 264 (392)
Q Consensus 187 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~ 264 (392)
.. ..+..........++++|.+..+| ++. +..+.|.++++............-.....|+|+|++..|+.+ +.
T Consensus 486 ~~-~~l~~~~~~~P~giavDp~~g~ly----~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 486 KR-KTLFREQGSKPRAIVVDPVHGFMY----WTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp CE-EEECCCSSCCCCCEECCSSSSCCE----ECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred ce-EEEEeCCCCCcceEEEccCCCcEE----EcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 43 333222223467899999776632 222 223678888876432221111222345679999976555554 45
Q ss_pred CCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 265 DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 265 dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
.+.|..+++........+...........|++..+ .++++....+.|..++..
T Consensus 561 ~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred CCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 67899999875443332211110223445566443 444455556777777654
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.07 E-value=0.0069 Score=56.92 Aligned_cols=225 Identities=7% Similarity=-0.096 Sum_probs=137.4
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeccc-CCCCcEEEEEecCCCCeEEE-EcCCCcEEEEECCCCeeeEEEecCCCcceEEE
Q 016257 126 RFAAGGVDGHLRIMHWPSLRIILDEP-KAHKSVLDMDFSLDSEFLAT-TSTDGSARIWKTEDGVAWTFLTRNSDEKIELC 203 (392)
Q Consensus 126 ~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~ 203 (392)
+|+.+ ....|+..++++........ ..-.....++|++.+..|+. -..++.|+.+++........+... ......+
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g-~~~P~Gl 85 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG-LDYPEGM 85 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSCCCEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC-CCCcceE
Confidence 44443 46779999998654332222 22346889999997666554 456788999998654433333322 2356789
Q ss_pred EecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe--CCCcEEEEecCCceeeee
Q 016257 204 RFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS--KDGDICVVDVKKMEINHW 281 (392)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~ 281 (392)
++.+.+..+ ..+-...+.|.+.++............-.....++++|...+|+... ..+.|...++........
T Consensus 86 AvD~~~~~L----Y~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 86 AVDWLGKNL----YWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp EEETTTTEE----EEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred EEEeCCCEE----EEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE
Confidence 999877763 35566778999999875433222223334578999999666666554 256788888876554333
Q ss_pred eeccccCcceEEEEEeeCCCeEEEEe-CCCeEEEEEeecCccccce-eeeeeeeeeeeeceEEEEee-ecceeeeecccc
Q 016257 282 SKRLHLGTSIALVEFCPTQRVVLTAS-KEWGAMITKLTVPADWKEW-QIYSLLLALFLASAVVFYIF-FENSDSFWNFPV 358 (392)
Q Consensus 282 ~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~d~~i~~W~~~~ 358 (392)
.. . ......++++++++.|+.+. ..+.|...++..... ... .....+.+..+....++.+- ..+.|..-|..+
T Consensus 162 ~~--~-~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 162 VP--N-VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp EC--S-CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred EC--C-CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCC
Confidence 32 2 45788999999877666655 456788777764332 221 11223445555555555554 245666666555
Q ss_pred cc
Q 016257 359 AR 360 (392)
Q Consensus 359 ~~ 360 (392)
|+
T Consensus 238 g~ 239 (628)
T 4a0p_A 238 GQ 239 (628)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.0086 Score=56.26 Aligned_cols=225 Identities=8% Similarity=-0.051 Sum_probs=136.0
Q ss_pred eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe-CCCcEEEEeCCCCceeecccCCCC
Q 016257 77 DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG-VDGHLRIMHWPSLRIILDEPKAHK 155 (392)
Q Consensus 77 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~ 155 (392)
+|+.+ ....|+..++.+........ +..-..+..++|.+.+..|+.+. .++.|+.+++..............
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~------~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIP------LTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECC------CCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEE------cCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 55554 44568888887654221111 11234678999999766666554 568898888865433222222224
Q ss_pred cEEEEEecCCCCeEE-EEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEe-CCccEEEEEeCCC
Q 016257 156 SVLDMDFSLDSEFLA-TTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR-GDKALLAVYDIST 233 (392)
Q Consensus 156 ~i~~i~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~d~~i~v~d~~~ 233 (392)
....+++++.++.|+ +-...+.|.+.++.... ...+....-.....++++|....+| .+- +..+.|...++..
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY----~tD~g~~~~I~r~~~dG 155 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMY----WTEWGGKPKIDRAAMDG 155 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEE----EEECSSSCEEEEEETTS
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEE----EeCCCCCCEEEEEeCCC
Confidence 567888987655554 44556789999986543 3333322233578999999766532 222 3467888888875
Q ss_pred ceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeE
Q 016257 234 WNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGA 312 (392)
Q Consensus 234 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 312 (392)
....... ..-.....++++++++.|+.+. ..+.|..+|+..... ..+. .. ......+++.. +.++++-...+.|
T Consensus 156 ~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~-~~-l~~P~glav~~-~~ly~tD~~~~~I 230 (628)
T 4a0p_A 156 SERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIA-DD-LPHPFGLTQYQ-DYIYWTDWSRRSI 230 (628)
T ss_dssp CSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE-EC-CSCEEEEEEET-TEEEEEETTTTEE
T ss_pred CceEEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEee-cc-CCCceEEEEEC-CEEEEecCCCCEE
Confidence 4432222 2345678999999877776665 457899999876544 2222 22 33456777764 4444444446777
Q ss_pred EEEEee
Q 016257 313 MITKLT 318 (392)
Q Consensus 313 ~iw~~~ 318 (392)
...+..
T Consensus 231 ~~~dk~ 236 (628)
T 4a0p_A 231 ERANKT 236 (628)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 766643
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.04 E-value=0.0013 Score=56.72 Aligned_cols=202 Identities=12% Similarity=0.090 Sum_probs=113.3
Q ss_pred CCeeEEEEcCCCCeEEEE------------eCCCeEEEEEEeCCccc-eeeccccCCCCCCCCCeEEEEecC--CCC-EE
Q 016257 64 GDPMTIAVNPSGDDFVCS------------TTNGGCKLFEVYGGATD-INLLAKKMPPLQDAGPQKCLSFSV--DGS-RF 127 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~------------~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~--~~~-~l 127 (392)
.....+...|+|..++++ ..+|.|.++|..+.... ..+................+.+.+ ++. +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 456778888887554444 16889999998643211 111111100111234667787766 454 44
Q ss_pred EEE-eC--CCcEEEEeCCCCce----eecccCC-CCcEEEEEecCCCCeEEEEc-----------------CCCcEEEEE
Q 016257 128 AAG-GV--DGHLRIMHWPSLRI----ILDEPKA-HKSVLDMDFSLDSEFLATTS-----------------TDGSARIWK 182 (392)
Q Consensus 128 ~~~-~~--dg~i~i~d~~~~~~----~~~~~~~-~~~i~~i~~~~~~~~l~~~~-----------------~d~~i~vwd 182 (392)
+++ .. +..|.+|+++.... +...... -....++.+.++|.+.++.. ..|.+..+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 444 22 46788887754321 1112211 13688999999998777654 123455555
Q ss_pred CCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC-cee--eeeecccCCCcEEEEECC-CCCE
Q 016257 183 TEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST-WNK--IGHKRLLRKPASVLSISL-DGKY 258 (392)
Q Consensus 183 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~ 258 (392)
. ++. ..+.... ...+.++|+||++.+ .++.+..+.|..|++.. ++. ...+ ........+++.+ +|++
T Consensus 210 ~--~~~-~~~~~~l-~~pNGia~spDg~~l----Yvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 210 P--NDV-RVVAEGF-DFANGINISPDGKYV----YIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDL 280 (355)
T ss_dssp T--TCC-EEEEEEE-SSEEEEEECTTSSEE----EEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCE
T ss_pred C--CeE-EEeecCC-cccCcceECCCCCEE----EEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcE
Confidence 4 332 2222222 246899999999873 35556678999999863 222 1222 2245567789998 5887
Q ss_pred EEEEeCC-CcEEEEecC
Q 016257 259 LAMGSKD-GDICVVDVK 274 (392)
Q Consensus 259 l~~~~~d-g~i~iwd~~ 274 (392)
.+++..+ +.|..|+..
T Consensus 281 wva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 281 WVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEESCHHHHHSCCTT
T ss_pred EEEecCCceEEEEECCC
Confidence 7766533 344445543
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.02 E-value=0.0044 Score=51.95 Aligned_cols=238 Identities=10% Similarity=0.078 Sum_probs=145.3
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc-e
Q 016257 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-I 146 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~ 146 (392)
+.-.+|..+.+|.-. ..+++|+|+++......... ...|.-=.|-.+. .|+-.+ +..|+-|+++... +
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~--------~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P 139 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM--------TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP 139 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC--------SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec--------CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCC
Confidence 344588888777654 67899999998875544432 2466666776544 454444 5679999997543 3
Q ss_pred eecccCCC----CcEEEEEecCCCCeEEEEc-------CCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 147 ILDEPKAH----KSVLDMDFSLDSEFLATTS-------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 147 ~~~~~~~~----~~i~~i~~~~~~~~l~~~~-------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
...+..|. ..|..-..+++.++++..+ -.|.+.+|..+.+. .+.+.+| ......+....+.....++
T Consensus 140 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGh-aa~F~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 140 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH-AASFAQFKMEGNAEESTLF 217 (365)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCS-EEEEEEECCTTCSSCEEEE
T ss_pred ceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeee-eeeeEEEecCCCCCCceEE
Confidence 33333332 2677888899999877544 23678899986543 3444433 2222222222221212233
Q ss_pred EEEEe-CCccEEEEEeCCCc---eee------eeecc---cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 216 CTVQR-GDKALLAVYDISTW---NKI------GHKRL---LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 216 ~~~~~-~~d~~i~v~d~~~~---~~~------~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
+++.- ...+.+++.++... .+. ..+.. ...-.-++..|+.-..++.-+.-|.|++||+.++.++..-
T Consensus 218 ~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 218 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 297 (365)
T ss_dssp EEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEe
Confidence 33333 23468999988542 111 10111 1222346788888888999999999999999999988765
Q ss_pred eccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecC
Q 016257 283 KRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 283 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 320 (392)
. .. ..+|...+-+.+..-++.....|.|.--.++..
T Consensus 298 r-IS-~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 298 R-IS-GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp E-CC-SSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred c-cC-CCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 3 33 566766666555556667778888877666643
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.96 E-value=0.0044 Score=58.18 Aligned_cols=223 Identities=7% Similarity=-0.109 Sum_probs=125.1
Q ss_pred CCCcEEEEeCCCCc-eeecccCCCCcEEEEEecCCCCeEEEEc-CCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCC
Q 016257 132 VDGHLRIMHWPSLR-IILDEPKAHKSVLDMDFSLDSEFLATTS-TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209 (392)
Q Consensus 132 ~dg~i~i~d~~~~~-~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 209 (392)
....|+..++.... ........-.....++|++.++.|+.+. ..+.|..+++........+....-.....+++.+.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 35678888887543 2222223334678999999776666554 467888898865432222222222358899999977
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeC--CCcEEEEecCCceeeeeeecccc
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSK--DGDICVVDVKKMEINHWSKRLHL 287 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~ 287 (392)
..+ ..+....+.|.+.++............-.....+++.|.+.+|+.... .+.|...++......... ...
T Consensus 96 ~~l----y~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~-~~~- 169 (619)
T 3s94_A 96 EKL----YWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-NSE- 169 (619)
T ss_dssp TEE----EEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSS-
T ss_pred CEE----EEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE-eCC-
Confidence 653 355677889999999864432222233345678999997666665543 456777777654333322 222
Q ss_pred CcceEEEEEeeCCCeEEEEe-CCCeEEEEEeecCcccccee-eeeeeeeeeeeceEEEEee-ecceeeeecccccc
Q 016257 288 GTSIALVEFCPTQRVVLTAS-KEWGAMITKLTVPADWKEWQ-IYSLLLALFLASAVVFYIF-FENSDSFWNFPVAR 360 (392)
Q Consensus 288 ~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~d~~i~~W~~~~~~ 360 (392)
......++++++++.|+.+. ..+.|...++.......... ....+.+.......++.+- ..+.|..-+..+|+
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCc
Confidence 45688999999766665554 45677777766433222211 1223444444455444443 34556666665554
No 305
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.88 E-value=0.0088 Score=50.52 Aligned_cols=177 Identities=8% Similarity=0.007 Sum_probs=103.3
Q ss_pred EEEecCCCCEEEEEeCC--------------CcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEc--C--CCcE
Q 016257 117 CLSFSVDGSRFAAGGVD--------------GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTS--T--DGSA 178 (392)
Q Consensus 117 ~~~~s~~~~~l~~~~~d--------------g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~--~--d~~i 178 (392)
+--+++++.+|+..... ..|+..++...+... +... . ...|++++++|+-.. . +..|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD--P--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS--C--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC--C--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34567889988877543 357777776654322 2111 1 236788888888765 3 3455
Q ss_pred EEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCE
Q 016257 179 RIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKY 258 (392)
Q Consensus 179 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 258 (392)
+.-++. +.....+..+. + .+++++++.++ .+......|.+.++..+....... .... ..++|++.+
T Consensus 132 y~~~~d-Gs~~~~lt~~~---~--~~~~~~g~~iy----~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~ 197 (302)
T 3s25_A 132 YRIRID-GEEKKKIKNHY---L--FTCNTSDRYFY----YNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTN 197 (302)
T ss_dssp EEEETT-SCCCEEEESSC---C--CCSEEETTEEE----EECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTE
T ss_pred EEEECC-CCCeEEEeCCC---c--eEeeEECCEEE----EEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCE
Confidence 566664 33344444332 2 45788888732 344456789999988765443322 2222 346699999
Q ss_pred EEEEeCC--CcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeec
Q 016257 259 LAMGSKD--GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 259 l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
|+-...+ ..|..-++......... ...+ ..|+|++++|+.++..+.-.|+.+..
T Consensus 198 iy~t~~~~~~~I~~~~ldG~~~~~Lt-----~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNPNPVVLT-----EANI--EHYNVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSCCCEECS-----CSCE--EEEEEETTEEEEEECSSSCEEEEEET
T ss_pred EEEEEcCCCcEEEEEECCCCCeEEEe-----CCCc--ceEEECCCEEEEEECCCCcEEEEEEC
Confidence 8876643 35767777766544332 2233 34888999887764432344555543
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.82 E-value=0.013 Score=50.59 Aligned_cols=184 Identities=12% Similarity=0.102 Sum_probs=106.1
Q ss_pred eEEEEecCCCCEEEEE------------eCCCcEEEEeCCCC--ce-eecccCC-----CCcEEEEEecC--CCC-eEEE
Q 016257 115 QKCLSFSVDGSRFAAG------------GVDGHLRIMHWPSL--RI-ILDEPKA-----HKSVLDMDFSL--DSE-FLAT 171 (392)
Q Consensus 115 v~~~~~s~~~~~l~~~------------~~dg~i~i~d~~~~--~~-~~~~~~~-----~~~i~~i~~~~--~~~-~l~~ 171 (392)
...+...|+|..++++ ..+|.|.++|.++. +. ...+.+. .-....+.+.+ ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3555666666433333 16899999998732 22 1122221 12567777755 454 3444
Q ss_pred Ec-C--CCcEEEEECCCCe----eeEEEecCCCcceEEEEecCCCCcceEEEEEEeC-----------------CccEEE
Q 016257 172 TS-T--DGSARIWKTEDGV----AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG-----------------DKALLA 227 (392)
Q Consensus 172 ~~-~--d~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----------------~d~~i~ 227 (392)
+. . +.+|.+|++.... .+..+....-.....+++.++|.. .++.. ..+.|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~f-----yvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHF-----YATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEE-----EEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCE-----EecCCcEeCCcccccchhhccCCccEEE
Confidence 42 2 4678888776432 223333333345788999999873 22222 235666
Q ss_pred EEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCC-ceee--eeeeccccCcceEEEEEee-CCCe
Q 016257 228 VYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKK-MEIN--HWSKRLHLGTSIALVEFCP-TQRV 302 (392)
Q Consensus 228 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~-~~~~--~~~~~~~~~~~i~~~~~s~-~~~~ 302 (392)
-+|.. +. ......-...+.++|+||++.|+.+. ..+.|..|++.. ++.. ..+ .. .+..-.+++.+ +|.+
T Consensus 207 r~d~~--~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~-~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 207 YYSPN--DV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SF-DTLVDNISVDPVTGDL 280 (355)
T ss_dssp EECTT--CC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--EC-SSEEEEEEECTTTCCE
T ss_pred EEECC--eE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eC-CCCCceEEEeCCCCcE
Confidence 66653 22 12222223567899999998887765 467899999863 3322 222 12 46678899999 5987
Q ss_pred EEEEeCC
Q 016257 303 VLTASKE 309 (392)
Q Consensus 303 l~~~~~d 309 (392)
.+++..+
T Consensus 281 wva~~~~ 287 (355)
T 3sre_A 281 WVGCHPN 287 (355)
T ss_dssp EEEEESC
T ss_pred EEEecCC
Confidence 7766544
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.81 E-value=0.0027 Score=55.12 Aligned_cols=191 Identities=12% Similarity=0.059 Sum_probs=94.2
Q ss_pred CCCeeEEEEcCC---CCeEEEEeC-C-----CeEEEEEEeCCccc--eeeccccCCC-CCCCCCeEEEEecCCCCEEEEE
Q 016257 63 EGDPMTIAVNPS---GDDFVCSTT-N-----GGCKLFEVYGGATD--INLLAKKMPP-LQDAGPQKCLSFSVDGSRFAAG 130 (392)
Q Consensus 63 ~~~v~~~~~sp~---~~~l~~~~~-d-----~~i~iw~~~~~~~~--~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~ 130 (392)
......++|+|+ +..|+.+.. . +.|..++....... ..+.. ..+. .........++|.|||.+.++.
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~-~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLD-GIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEE-EECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEE-eCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 457899999998 555554433 2 56777877643211 11111 1110 0111123689999999655553
Q ss_pred eC-------------CCcEEEEeCCCCce-------------eecccCCCCcEEEEEecC-CCCeEEEEcCCCcE-----
Q 016257 131 GV-------------DGHLRIMHWPSLRI-------------ILDEPKAHKSVLDMDFSL-DSEFLATTSTDGSA----- 178 (392)
Q Consensus 131 ~~-------------dg~i~i~d~~~~~~-------------~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i----- 178 (392)
+. .|.|.-++... +. ...+.........++|+| +++++++-.....+
T Consensus 153 G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~ 231 (352)
T 2ism_A 153 GEVYERELAQDLASLGGKILRLTPEG-EPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGH 231 (352)
T ss_dssp CCTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CC
T ss_pred CCCCCCccccCCCCCceEEEEEcCCC-CCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCC
Confidence 32 14565555432 11 001111123467789999 55544443222221
Q ss_pred -EEEECCCCe------------------eeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee---
Q 016257 179 -RIWKTEDGV------------------AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK--- 236 (392)
Q Consensus 179 -~vwd~~~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~--- 236 (392)
.+.-+..+. +...+ .++ .....++| .++.. +++....+.|...+++....
T Consensus 232 dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~-~ap~G~~~-~~G~l-----~v~~~~~~~v~~v~~~~~~~~~~ 303 (352)
T 2ism_A 232 DEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQG-FPPGNLAF-FRGDL-----YVAGLRGQALLRLVLEGERGRWR 303 (352)
T ss_dssp CEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTC-CCEEEEEE-ETTEE-----EEEETTTTEEEEEEEEEETTEEE
T ss_pred eEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCC-CCCcceEE-ECCEE-----EEEECCCCEEEEEEECCCCccee
Confidence 222222222 11122 111 23456777 34432 34455566777777654321
Q ss_pred ---eeeecccCCCcEEEEECCCCCEEEEEe
Q 016257 237 ---IGHKRLLRKPASVLSISLDGKYLAMGS 263 (392)
Q Consensus 237 ---~~~~~~~~~~v~~~~~s~~~~~l~~~~ 263 (392)
...+......+..+++.|||.+.++..
T Consensus 304 ~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 304 VLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred ecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 112212235788999999997766653
No 308
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.78 E-value=0.032 Score=53.98 Aligned_cols=230 Identities=11% Similarity=0.022 Sum_probs=133.9
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP 142 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 142 (392)
...|.++.-..+| +|..|..+| +..||-...+ .... .. ......|.++.-..+| .|..|+.+| +..||..
T Consensus 21 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~~~---~~~~--~~-~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~ 90 (758)
T 3ott_A 21 ASVVSCFLQDSEG-LIWIGSNKG-LFSYDGYSTQ---QHFT--YG-ENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYR 90 (758)
T ss_dssp CCCEEEEEECTTS-CEEEEESSC-EEEECSSCEE---ECSC--TT-STTSSCEEEEEEETTT-EEEEEETTE-EEEEETT
T ss_pred cceEEEEEECCCC-CEEEEECCC-ccccCCCceE---EEEc--cC-CCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCC
Confidence 4679999888777 555667888 6666632211 1110 00 1123568888777766 566666665 7899987
Q ss_pred CCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe----cCCCcceEEEEecCCCCcceEEEEE
Q 016257 143 SLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT----RNSDEKIELCRFSKDGTKPFLFCTV 218 (392)
Q Consensus 143 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~ 218 (392)
+.+...........|.++.. .++ .|..++.+ -+..+|..+++.. .+. ......|.++....++. +.
T Consensus 91 ~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~------lW 160 (758)
T 3ott_A 91 ADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQ------IY 160 (758)
T ss_dssp TTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCC------EE
T ss_pred CCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCC------EE
Confidence 75432211112235776654 344 45556655 5888998765433 221 11223578888877777 34
Q ss_pred EeCCccEEEEEeCCCceeeeeecc-----cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEE
Q 016257 219 QRGDKALLAVYDISTWNKIGHKRL-----LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIAL 293 (392)
Q Consensus 219 ~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~ 293 (392)
.+... -+..+|..+.+....... ....|.++...+++..|..|+.. -+..+|..+++..... ... ...|.+
T Consensus 161 igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl~~~~~~~~~~~~~~-~l~-~~~i~~ 236 (758)
T 3ott_A 161 VGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YLFQYFPSTGQIKQTE-AFH-NNSIKS 236 (758)
T ss_dssp EEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EEEEEETTTTEEEEEE-EEE-EEEEEE
T ss_pred EEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECC-CCeEEcCCCCeEEecc-CCC-CCeEEE
Confidence 44444 477888776543211111 12347888887777766666643 4888998877654322 122 456888
Q ss_pred EEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 294 VEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 294 ~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
+....+|.+.+ |+. +.+.+++..
T Consensus 237 i~~d~~g~lWi-gT~-~Gl~~~~~~ 259 (758)
T 3ott_A 237 LALDGNGDLLA-GTD-NGLYVYHND 259 (758)
T ss_dssp EEECTTCCEEE-EET-TEEEEECCT
T ss_pred EEEcCCCCEEE-EeC-CceeEEecC
Confidence 88877777554 444 456666654
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.76 E-value=0.0097 Score=50.25 Aligned_cols=184 Identities=9% Similarity=0.007 Sum_probs=93.1
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCc---eee--cccCCCCcEEEEEecCCCCeEEEEcCC-----CcEEEEECCCCe
Q 016257 123 DGSRFAAGGVD-----GHLRIMHWPSLR---IIL--DEPKAHKSVLDMDFSLDSEFLATTSTD-----GSARIWKTEDGV 187 (392)
Q Consensus 123 ~~~~l~~~~~d-----g~i~i~d~~~~~---~~~--~~~~~~~~i~~i~~~~~~~~l~~~~~d-----~~i~vwd~~~~~ 187 (392)
++..++.|+.+ ..+.+||+.+.+ ... .+.........+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56677777654 468999988765 322 12211112222222 56677777644 358899988765
Q ss_pred eeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc-----cEEEEEeCCCceeee--eecccCCCcEEEEECCCCCEEE
Q 016257 188 AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK-----ALLAVYDISTWNKIG--HKRLLRKPASVLSISLDGKYLA 260 (392)
Q Consensus 188 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d-----~~i~v~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~ 260 (392)
-...-..+....-.+++.. ++.. .+.++.+ ..+.+||+.+.+-.. .+.........+.+ ++++++
T Consensus 140 W~~~~~~p~~r~~~~~~~~-~~~i-----yv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 211 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA-SGVI-----YCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYV 211 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE-TTEE-----EEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred EEECCCCCCCcccceEEEE-CCEE-----EEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEE
Confidence 4332221111111222222 3332 3444432 468899987654321 12111112223333 567777
Q ss_pred EEeCC-----CcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCC-----eEEEEEee
Q 016257 261 MGSKD-----GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEW-----GAMITKLT 318 (392)
Q Consensus 261 ~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~ 318 (392)
.|+.+ ..+.+||+.+.+-...............+ .-++++++.|+.++ .+.+||+.
T Consensus 212 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 212 VGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT--VLRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred EeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE--EECCEEEEEcCcCCCcccccEEEEcCC
Confidence 77764 46999999887654332111101222222 23777778887653 45555554
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.71 E-value=0.0064 Score=51.38 Aligned_cols=190 Identities=12% Similarity=0.028 Sum_probs=93.9
Q ss_pred CCCeEEEEeCC-----CeEEEEEEeCCccc-eeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC-----CcEEEEeCC
Q 016257 74 SGDDFVCSTTN-----GGCKLFEVYGGATD-INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-----GHLRIMHWP 142 (392)
Q Consensus 74 ~~~~l~~~~~d-----~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~ 142 (392)
++..++.|+.+ ..+.+||..+.+.. ..... ..+. .......+.+ +++.++.|+.+ ..+.+||+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~-~~p~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~ 136 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA-PMNV--RRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPN 136 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC-CCSS--CCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC-CCCC--CccceeEEEE--CCEEEEEcccCCCcccceEEEEcCC
Confidence 56677777754 35888887665410 11111 1110 1111122222 56666676643 358899988
Q ss_pred CCceeec--ccCCCCcEEEEEecCCCCeEEEEcCC-----CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 143 SLRIILD--EPKAHKSVLDMDFSLDSEFLATTSTD-----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 143 ~~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
+.+.... ..........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+....-.+++.. ++. +
T Consensus 137 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i--- 209 (301)
T 2vpj_A 137 IDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDH-I--- 209 (301)
T ss_dssp TTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-E---
T ss_pred CCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCE-E---
Confidence 7654321 1211112222222 56677777654 4588999987754332111111111122222 332 1
Q ss_pred EEEEeCC-----ccEEEEEeCCCceee--eeecccCCCcEEEEECCCCCEEEEEeCC-----CcEEEEecCCcee
Q 016257 216 CTVQRGD-----KALLAVYDISTWNKI--GHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEI 278 (392)
Q Consensus 216 ~~~~~~~-----d~~i~v~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~ 278 (392)
++.++. ...+.+||+++.+-. ..+.........+.+ ++++++.|+.+ ..+.+||+++.+-
T Consensus 210 -~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 210 -YVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp -EEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred -EEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 344443 256899999865432 222111122223333 66777777765 3578888877654
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.70 E-value=0.056 Score=54.52 Aligned_cols=282 Identities=9% Similarity=0.061 Sum_probs=145.5
Q ss_pred CCCeeEEEEcCC------CCeEEEEeC-CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEec--CCCCEEEEEeCC
Q 016257 63 EGDPMTIAVNPS------GDDFVCSTT-NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFS--VDGSRFAAGGVD 133 (392)
Q Consensus 63 ~~~v~~~~~sp~------~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~d 133 (392)
.+.|.|+++.|. +++++.|.. |++++|+++.+.+...... .. ......++.+. ....+|..|-.|
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~---L~---~~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEM---LG---GEIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEE---CC---SSCCEEEEEEEEETTEEEEEEEETT
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEE---CC---CCCCCcEEEEEEeCCCcEEEEEeCC
Confidence 568999999863 368999986 9999999997654332211 11 11233444333 234578889999
Q ss_pred CcEEEEeCC--CCceeec--ccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCC
Q 016257 134 GHLRIMHWP--SLRIILD--EPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209 (392)
Q Consensus 134 g~i~i~d~~--~~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 209 (392)
|.+.-+.+. +++.... ..-...++.=..+...+..-+.+..++...++.-+ ++.... ......--....|+...
T Consensus 627 G~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~ 704 (1158)
T 3ei3_A 627 GALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDG 704 (1158)
T ss_dssp SEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSS
T ss_pred CeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCccc
Confidence 988666553 4443211 12223344444444444433333334555555543 222211 11112112334454432
Q ss_pred -CcceEEEEEEeCCccEEEEEeCCCcee--eeeecccCCCcEEEEECCCCCEEEEEeCC---------------------
Q 016257 210 -TKPFLFCTVQRGDKALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKD--------------------- 265 (392)
Q Consensus 210 -~~~~~~~~~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------------------- 265 (392)
.. . ++. ..++.++|.-+...+. ++.+ .....++.++++|+.+.++.+..+
T Consensus 705 ~~~--g--~v~-~~~~~LrI~~i~~~~~~~~~~i-pL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1158)
T 3ei3_A 705 YPD--S--LAL-ANNSTLTIGTIDEIQKLHIRTV-PLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQA 778 (1158)
T ss_dssp STT--E--EEE-ECSSCEEEEEECCSSSEEEEEE-ECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHC
T ss_pred CCC--c--EEE-EcCCceEEEEecccCCeeEEEE-eCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhh
Confidence 11 1 222 2234477776643222 1122 224567788888877665544311
Q ss_pred ----------------------------CcEEEEecCCceeeeeeeccccCcceEEEEE---eeC-CCeEEEEe------
Q 016257 266 ----------------------------GDICVVDVKKMEINHWSKRLHLGTSIALVEF---CPT-QRVVLTAS------ 307 (392)
Q Consensus 266 ----------------------------g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~---s~~-~~~l~~~~------ 307 (392)
+.|++.|..+.+.+..+.-.. ...+.+++. ..+ ..+|+.|+
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~-nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~ 857 (1158)
T 3ei3_A 779 LSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ-NEYALSLVSCKLGKDPNTYFIVGTAMVYPE 857 (1158)
T ss_dssp SEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCT-TEEEEEEEEECCTTCCCCEEEEEEEECCTT
T ss_pred hhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCC-CcceEEEEEEEEccCCCEEEEEEeeecCCC
Confidence 236777777776655443333 455555553 222 35888876
Q ss_pred ----CCCeEEEEEeecCccccce-e--eeeeeeeeeeeceEEEEeeecceeeeeccccccc
Q 016257 308 ----KEWGAMITKLTVPADWKEW-Q--IYSLLLALFLASAVVFYIFFENSDSFWNFPVARN 361 (392)
Q Consensus 308 ----~dg~i~iw~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~d~~i~~W~~~~~~~ 361 (392)
..|.|.++++... ++... . +.-.+.+...-.+. +.++..+++++|++...+.
T Consensus 858 e~~~~~Gri~vf~v~~~-kL~lv~~~~v~g~v~al~~~~g~-Lla~ig~~l~vy~l~~~~~ 916 (1158)
T 3ei3_A 858 EAEPKQGRIVVFQYSDG-KLQTVAEKEVKGAVYSMVEFNGK-LLASINSTVRLYEWTTEKE 916 (1158)
T ss_dssp CSSCCCEEEEEEEEETT-EEEEEEEEEESSCEEEEEEETTE-EEEEETTEEEEEEECTTSC
T ss_pred CCCCCceEEEEEEEECC-EEEEEEEEEcCCcCEEEeeeCCE-EEEEcCCEEEEEECCCCce
Confidence 3489999999732 22211 1 11112222222333 4445568899999876543
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.69 E-value=0.011 Score=50.06 Aligned_cols=188 Identities=8% Similarity=0.016 Sum_probs=94.8
Q ss_pred CCCeEEEEeCC----CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC------CcEEEEeCCC
Q 016257 74 SGDDFVCSTTN----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD------GHLRIMHWPS 143 (392)
Q Consensus 74 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~i~d~~~ 143 (392)
++..++.|+.+ ..+.+||..+.+.... . ..+. .......+.+ +++.++.|+.+ ..+.+||..+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~--~-~~p~--~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK--L-GPPT--PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEE--E-CCSS--CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC--C-CCCc--cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCC
Confidence 56677777654 5677888766543211 1 1110 1111122222 56677777654 4689999887
Q ss_pred Cceeec--ccCCCCcEEEEEecCCCCeEEEEcC---------CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcc
Q 016257 144 LRIILD--EPKAHKSVLDMDFSLDSEFLATTST---------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 144 ~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~---------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
.+-... +.........+.+ +++.++.|+. -..+.+||+.+.+-...-.......-.+++.. ++. +
T Consensus 128 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i 203 (306)
T 3ii7_A 128 ESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDK-I 203 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-E
T ss_pred CceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCE-E
Confidence 654322 1111111222222 5666666653 34588999987754332111111111222222 333 2
Q ss_pred eEEEEEEeCCc-----cEEEEEeCCCcee--eeeecccCCCcEEEEECCCCCEEEEEeCC-----CcEEEEecCCcee
Q 016257 213 FLFCTVQRGDK-----ALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEI 278 (392)
Q Consensus 213 ~~~~~~~~~~d-----~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~ 278 (392)
.+.++.+ ..+.+||+.+.+- +..+........++.+ ++++++.|+.+ ..+.+||..+.+-
T Consensus 204 ----~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 204 ----FAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp ----EEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred ----EEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 3444432 4688999887532 2222222223333333 66778888754 4588899887653
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.65 E-value=0.023 Score=48.78 Aligned_cols=238 Identities=13% Similarity=0.102 Sum_probs=124.3
Q ss_pred CCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCC---CCEEEEE-e--CCCc
Q 016257 62 SEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVD---GSRFAAG-G--VDGH 135 (392)
Q Consensus 62 h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~-~--~dg~ 135 (392)
.-.....|+|.|+|+.+++--..|.|++++..+++.. .+................++++|+ +..|+.. + .++.
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3567899999999987776544888888865443321 111100011123567899999995 3455443 2 3455
Q ss_pred EEEEeCCCC----------ceeec-ccC-CCCcEEEEEecCCCCeEEEEcC-------------CCcEEEEECCCCe---
Q 016257 136 LRIMHWPSL----------RIILD-EPK-AHKSVLDMDFSLDSEFLATTST-------------DGSARIWKTEDGV--- 187 (392)
Q Consensus 136 i~i~d~~~~----------~~~~~-~~~-~~~~i~~i~~~~~~~~l~~~~~-------------d~~i~vwd~~~~~--- 187 (392)
|.-|.+..+ +.+.. +.. ....-..|.|.|||.++++.+. .|.|.-.+....-
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 666655431 11111 111 1113457999999987776542 2445444543210
Q ss_pred ----eeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee------------------eeeecccCC
Q 016257 188 ----AWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK------------------IGHKRLLRK 245 (392)
Q Consensus 188 ----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~------------------~~~~~~~~~ 245 (392)
....+...+. ....++|+|++.. + ..-.+.++.=.|--+..+.. +..+..+..
T Consensus 189 nPf~~~~i~a~G~R-Np~Gla~dp~G~L-~---~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 189 NPFPGSPVYSYGHR-NVQGLAWDDKQRL-F---ASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA 263 (347)
T ss_dssp CSSTTCCEEEBCCS-BCCEEEECTTCCE-E---EEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred CCCCCCeEEeeCCC-CcceEEECCCCCE-E---EEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence 1123333333 3678999998662 1 12222222111211122111 111111112
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEecCCceee---eeeeccccCcceEEEEEeeCCCeEEEEe
Q 016257 246 PASVLSISLDGKYLAMGSKDGDICVVDVKKMEIN---HWSKRLHLGTSIALVEFCPTQRVVLTAS 307 (392)
Q Consensus 246 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 307 (392)
....++|. +|..+...-..+.|....+...... ..+.... ...+..++..|||.++++..
T Consensus 264 ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~-~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 264 SPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGE-YGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTT-SSCEEEEEEEETTEEEEEEC
T ss_pred CCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCC-CCCccEEEECCCCcEEEEEc
Confidence 44566775 3555555555667777777655421 1121222 46899999999998766654
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.61 E-value=0.03 Score=49.02 Aligned_cols=238 Identities=11% Similarity=0.096 Sum_probs=147.3
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc-e
Q 016257 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-I 146 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~ 146 (392)
+.-.+|..+.||.-. ..+++|+|+++......... ...|.-=.|-.+. .|+..+ +..|+-|+++... +
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~--------~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P 138 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM--------TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP 138 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC--------SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec--------CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCc
Confidence 455688888777654 67899999988775544432 2355666665444 455444 5679999997533 3
Q ss_pred eecccCCC----CcEEEEEecCCCCeEEEEc-------CCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 147 ILDEPKAH----KSVLDMDFSLDSEFLATTS-------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 147 ~~~~~~~~----~~i~~i~~~~~~~~l~~~~-------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
...+..|. ..|..-..+++.++++..+ -.|.+.+|..+.+. .+.+.+| ......+....+.....++
T Consensus 139 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGh-aa~F~~~~~~g~~~~~~lf 216 (494)
T 1bpo_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH-AASFAQFKMEGNAEESTLF 216 (494)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCS-EEEEEEEECTTCSSEEEEE
T ss_pred hhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheee-eeeeEEEecCCCCCCceEE
Confidence 33333332 2677888899999877543 23678899986543 3444433 2222233332222222233
Q ss_pred EEEEeC-CccEEEEEeCCCc---ee------eeeecc---cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 216 CTVQRG-DKALLAVYDISTW---NK------IGHKRL---LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 216 ~~~~~~-~d~~i~v~d~~~~---~~------~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
+++.-. ..+.+++.++... .. +..+.. ...-..++..|+.-..++.-+.-|.|++||+.++.++..-
T Consensus 217 ~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (494)
T ss_dssp EEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeee
Confidence 333332 3478999988542 11 111111 1222347888888889999999999999999999988765
Q ss_pred eccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecC
Q 016257 283 KRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 283 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 320 (392)
. .. ..+|...+-.....-++.....|.|.--.++..
T Consensus 297 r-Is-~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 297 R-IS-GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp E-CC-SSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred c-cc-CCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 3 33 567766666666666777778888877777644
No 315
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.59 E-value=0.0041 Score=56.06 Aligned_cols=158 Identities=9% Similarity=-0.013 Sum_probs=95.1
Q ss_pred cEEEEEecC-CCCeEEEEcC-CCcEEEEECCCCeeeEEEecCC--CcceEEEEe-------cCCCCcceEEEEEEeCCc-
Q 016257 156 SVLDMDFSL-DSEFLATTST-DGSARIWKTEDGVAWTFLTRNS--DEKIELCRF-------SKDGTKPFLFCTVQRGDK- 223 (392)
Q Consensus 156 ~i~~i~~~~-~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~--~~~v~~~~~-------~~~~~~~~~~~~~~~~~d- 223 (392)
....|+|+| +...|+.+.. .+.|++.|+.++.......... -.....++| ++++..+ +++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~l----yvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYM----IVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEE----EEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEE----EEEeCCCC
Confidence 567899998 3554555443 4679999998776655443321 124789999 9999852 2332222
Q ss_pred -----cEEEEEeCCC-ceee-----eeecccCCCcEEEEECCCC-CEEEEEeCCCcEEEEecC-------Ccee------
Q 016257 224 -----ALLAVYDIST-WNKI-----GHKRLLRKPASVLSISLDG-KYLAMGSKDGDICVVDVK-------KMEI------ 278 (392)
Q Consensus 224 -----~~i~v~d~~~-~~~~-----~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~-------~~~~------ 278 (392)
..+.+++... +... ..+... .....++++|++ .++++-..++.|..+|+. ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 2466776443 1211 112111 234577899954 555555577889999998 5543
Q ss_pred -----e-eeeeccccCcceEEEEEeeCCCeEEEE-eCCCeEEEEEeec
Q 016257 279 -----N-HWSKRLHLGTSIALVEFCPTQRVVLTA-SKEWGAMITKLTV 319 (392)
Q Consensus 279 -----~-~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~ 319 (392)
. ....... ......++|+|+|+.|+.+ +....|+.++...
T Consensus 295 ~~~g~~~~l~~~~~-~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 295 NNPNTFKQLFTIAD-PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp GCTTTEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccccccceeEecCC-CCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 1 1111222 4457899999999965444 4567888776653
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.57 E-value=0.041 Score=49.45 Aligned_cols=110 Identities=11% Similarity=0.141 Sum_probs=61.2
Q ss_pred CCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeecc-cc-CCCCCCCCCeEEEEecCC---CCEEEEEeC-----
Q 016257 63 EGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLA-KK-MPPLQDAGPQKCLSFSVD---GSRFAAGGV----- 132 (392)
Q Consensus 63 ~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~-~~~~~~~~~v~~~~~s~~---~~~l~~~~~----- 132 (392)
-.....|+|.|+|+++++-...+.|++++..++... .+.. .. ............++|+|+ +..|+....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~-~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVK-TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEe-EEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 456789999999987776433346777764433321 1111 00 000113467789999995 556655442
Q ss_pred --------CCcEEEEeCCCC-------ceeec-ccC-CCCcEEEEEecCCCCeEEEEc
Q 016257 133 --------DGHLRIMHWPSL-------RIILD-EPK-AHKSVLDMDFSLDSEFLATTS 173 (392)
Q Consensus 133 --------dg~i~i~d~~~~-------~~~~~-~~~-~~~~i~~i~~~~~~~~l~~~~ 173 (392)
...|.-++.... +.+.. +.. .......|+|.|||.++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 124555554322 11211 111 112478899999998777654
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.56 E-value=0.014 Score=49.43 Aligned_cols=223 Identities=13% Similarity=0.058 Sum_probs=109.1
Q ss_pred eEEEEeC--CCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC----CcEEEEeCCCCceeec-
Q 016257 77 DFVCSTT--NGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD----GHLRIMHWPSLRIILD- 149 (392)
Q Consensus 77 ~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~~~~- 149 (392)
.++.|+. ...+.+||..+.+-.. .. ..+. ....-..+. -++..++.|+.+ ..+.+||..+.+....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~--~~-~~p~--~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTD--IR-CPFE--KRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEE--CC-CCSC--CCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCceEEEecCCCCCEec--CC-CCCc--ccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC
Confidence 4445554 3457788876654221 11 1110 111112222 256667777654 5688999887654322
Q ss_pred -ccCCCCcEEEEEecCCCCeEEEEcCC------CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCC
Q 016257 150 -EPKAHKSVLDMDFSLDSEFLATTSTD------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD 222 (392)
Q Consensus 150 -~~~~~~~i~~i~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 222 (392)
+.........+.+ +++.++.|+.+ ..+.+||..+.+-...-..+....-.+++.. ++. + .+.++.
T Consensus 87 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i----yv~GG~ 158 (306)
T 3ii7_A 87 GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGL-I----YVCGGS 158 (306)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-E----EEECCE
T ss_pred CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCE-E----EEECCC
Confidence 2211112222222 56677777754 4588999987754332111111111122222 333 2 233332
Q ss_pred ---------ccEEEEEeCCCcee--eeeecccCCCcEEEEECCCCCEEEEEeCC-----CcEEEEecCCceeeeeeeccc
Q 016257 223 ---------KALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEINHWSKRLH 286 (392)
Q Consensus 223 ---------d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~ 286 (392)
...+.+||..+.+- +..+......-..+.+ ++++++.|+.+ ..+.+||+.+.+-........
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 236 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW 236 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC
T ss_pred CCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC
Confidence 35588999887542 2212111122222333 56777777653 468999998876443321111
Q ss_pred cCcceEEEEEeeCCCeEEEEeCC-----CeEEEEEee
Q 016257 287 LGTSIALVEFCPTQRVVLTASKE-----WGAMITKLT 318 (392)
Q Consensus 287 ~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~ 318 (392)
.......+.+ ++++++.|+.+ ..+.+||+.
T Consensus 237 ~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 237 KGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp CBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETT
T ss_pred CccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCC
Confidence 1222233333 77788888754 355566654
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.53 E-value=0.021 Score=48.21 Aligned_cols=184 Identities=13% Similarity=0.076 Sum_probs=91.4
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCceeecc--cCCCCcEEEEEecCCCCeEEEEcCCC-----cEEEEECCCCeeeE
Q 016257 123 DGSRFAAGGVD-----GHLRIMHWPSLRIILDE--PKAHKSVLDMDFSLDSEFLATTSTDG-----SARIWKTEDGVAWT 190 (392)
Q Consensus 123 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~ 190 (392)
++..++.|+.+ ..+.+||..+.+..... .........+.+ +++.++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56666777644 35889998876543221 111112222222 566777776553 47788987765433
Q ss_pred EEecCCCcceEEEEecCCCCcceEEEEEEeCC-------ccEEEEEeCCCcee--eeeecccCCCcEEEEECCCCCEEEE
Q 016257 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD-------KALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAM 261 (392)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~ 261 (392)
.-..+....-.+++.. ++. + .+.++. ...+.+||..+.+- +..+.........+.+ ++++++.
T Consensus 139 ~~~~p~~r~~~~~~~~-~~~-i----yv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 210 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV-GGL-L----YAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAV 210 (302)
T ss_dssp ECCCSSCCBSCEEEEE-TTE-E----EEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred cCCCCCcccCceEEEE-CCE-E----EEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEE
Confidence 2111111111222222 332 2 233332 24588999886542 2222211222222333 5677777
Q ss_pred EeCC-----CcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCC-----eEEEEEee
Q 016257 262 GSKD-----GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEW-----GAMITKLT 318 (392)
Q Consensus 262 ~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~ 318 (392)
|+.+ ..+.+||+.+.+-...............+ ..++++++.|+.++ .+.+||+.
T Consensus 211 GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC--AVNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp CCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE--EECCEEEEECCcCCCcccccEEEEcCC
Confidence 7754 46999999887644332111101111222 23677777777653 35556554
No 319
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.50 E-value=0.11 Score=52.53 Aligned_cols=297 Identities=14% Similarity=0.119 Sum_probs=155.9
Q ss_pred CCceeeeecCCCCCc---ceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcC--CCCe
Q 016257 3 GGGTVTCGSWIKRPE---NVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNP--SGDD 77 (392)
Q Consensus 3 ~~~~v~~~~w~~~~~---~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~~~~ 77 (392)
.+..|.|+++.|.++ +-.+++.|.. .+++++|+.++.- .......+.. ...+.++.+.. ...+
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~-----~d~tv~I~sL~~l------~~~~~~~L~~-~~~p~si~l~~~~~~~~ 619 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLW-----TDISARILKLPSF------ELLHKEMLGG-EIIPRSILMTTFESSHY 619 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEET-----TTTEEEEEETTTC------CEEEEEECCS-SCCEEEEEEEEETTEEE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEEC-----CCCEEEEEECCCC------CeEEEEECCC-CCCCcEEEEEEeCCCcE
Confidence 456899999987431 1235555443 2678999998631 2222333322 12344444432 3357
Q ss_pred EEEEeCCCeEEEEEEeC--CccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCC
Q 016257 78 FVCSTTNGGCKLFEVYG--GATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHK 155 (392)
Q Consensus 78 l~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 155 (392)
|..|-.||.+.-+.+.. +..... .... + ...++.-..+...+..-+.+..+.-..+|.-+ ++....-... .
T Consensus 620 L~igl~dG~l~~~~~d~~tg~l~d~-r~~~---L-G~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l~~-~ 692 (1158)
T 3ei3_A 620 LLCALGDGALFYFGLNIETGLLSDR-KKVT---L-GTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNVNL-K 692 (1158)
T ss_dssp EEEEETTSEEEEEEECTTTCCEEEE-EEEE---C-CSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEBSS-S
T ss_pred EEEEeCCCeEEEEEEcCCCCccccc-eeEE---c-CCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEeccCh-H
Confidence 88999999887776643 221111 0001 1 12355544454444433333335555555432 3332221111 1
Q ss_pred cE-EEEEecCC--CCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEe--C---------
Q 016257 156 SV-LDMDFSLD--SEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQR--G--------- 221 (392)
Q Consensus 156 ~i-~~i~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~--------- 221 (392)
.+ ....|+.. .+-++..+ ++.++|..+.+-........+-+..++.++++|+.+..++...-.. .
T Consensus 693 ~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~ 771 (1158)
T 3ei3_A 693 EVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALR 771 (1158)
T ss_dssp CCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESS
T ss_pred HhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhh
Confidence 23 23345432 23355444 4569998876543333222233456888888887764222111000 0
Q ss_pred ---------------------------------CccEEEEEeCCCceeeeeecccC-CCcEEEE---ECCC-CCEEEEEe
Q 016257 222 ---------------------------------DKALLAVYDISTWNKIGHKRLLR-KPASVLS---ISLD-GKYLAMGS 263 (392)
Q Consensus 222 ---------------------------------~d~~i~v~d~~~~~~~~~~~~~~-~~v~~~~---~s~~-~~~l~~~~ 263 (392)
..+.|++.|..+++.+..+.... ..+.+++ |..+ ..++++|+
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGT 851 (1158)
T 3ei3_A 772 PSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGT 851 (1158)
T ss_dssp CCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEE
T ss_pred hhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEe
Confidence 12457788877777665444322 2344443 3332 47888886
Q ss_pred ----------CCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccc
Q 016257 264 ----------KDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADW 323 (392)
Q Consensus 264 ----------~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 323 (392)
..|.|++|++..++......... .+++++++-- +|+ |++|- ..++++|++...+.+
T Consensus 852 a~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v-~g~v~al~~~-~g~-Lla~i-g~~l~vy~l~~~~~L 917 (1158)
T 3ei3_A 852 AMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEV-KGAVYSMVEF-NGK-LLASI-NSTVRLYEWTTEKEL 917 (1158)
T ss_dssp EECCTTCSSCCCEEEEEEEEETTEEEEEEEEEE-SSCEEEEEEE-TTE-EEEEE-TTEEEEEEECTTSCE
T ss_pred eecCCCCCCCCceEEEEEEEECCEEEEEEEEEc-CCcCEEEeee-CCE-EEEEc-CCEEEEEECCCCceE
Confidence 24789999997665444433333 7888888743 554 44443 369999999865443
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.45 E-value=0.04 Score=46.42 Aligned_cols=189 Identities=15% Similarity=0.122 Sum_probs=92.9
Q ss_pred CCCeEEEEeCCC-----eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCC-----cEEEEeCCC
Q 016257 74 SGDDFVCSTTNG-----GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDG-----HLRIMHWPS 143 (392)
Q Consensus 74 ~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~ 143 (392)
++..++.|+.++ .+.+||..+.+.... . ..+. .......+.+ ++..++.|+.++ .+.+||+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~-~~p~--~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~ 133 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV--A-NMRD--RRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKS 133 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE--C-CCSS--CCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTT
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeC--C-CCCc--cccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCC
Confidence 566777776543 477777765542211 1 1110 1111122222 566777776553 578889887
Q ss_pred Cceeec--ccCCCCcEEEEEecCCCCeEEEEcCC-------CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceE
Q 016257 144 LRIILD--EPKAHKSVLDMDFSLDSEFLATTSTD-------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFL 214 (392)
Q Consensus 144 ~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 214 (392)
.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-.......-.+++.. ++. +
T Consensus 134 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i-- 207 (302)
T 2xn4_A 134 NEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNL-L-- 207 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-E--
T ss_pred CeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCE-E--
Confidence 654322 1111112222222 46666666542 3588999987654332111111111222222 333 1
Q ss_pred EEEEEeCCc-----cEEEEEeCCCceee--eeecccCCCcEEEEECCCCCEEEEEeCCC-----cEEEEecCCceee
Q 016257 215 FCTVQRGDK-----ALLAVYDISTWNKI--GHKRLLRKPASVLSISLDGKYLAMGSKDG-----DICVVDVKKMEIN 279 (392)
Q Consensus 215 ~~~~~~~~d-----~~i~v~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~ 279 (392)
.+.++.+ ..+.+||..+.+-. ..+.........+. -++++++.|+.++ .+.+||+.+.+-.
T Consensus 208 --yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 208 --YAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp --EEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred --EEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 3444432 46889998865422 22211111222222 2667777877653 4899998877644
No 321
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.43 E-value=0.016 Score=45.63 Aligned_cols=180 Identities=8% Similarity=-0.105 Sum_probs=96.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCce-----eecccCC--CCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCee------eE
Q 016257 124 GSRFAAGGVDGHLRIMHWPSLRI-----ILDEPKA--HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVA------WT 190 (392)
Q Consensus 124 ~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~--~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~------~~ 190 (392)
...|++..+| +++.=...++.. .....+. -..+..++|+|+|.+.++ .+|.++-.+..+... -.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3455666666 555544443331 0011111 236789999998886666 667766666544111 11
Q ss_pred EEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeee-----e--cccCCCcEEEEECCCCCEEEEEe
Q 016257 191 FLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGH-----K--RLLRKPASVLSISLDGKYLAMGS 263 (392)
Q Consensus 191 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-----~--~~~~~~v~~~~~s~~~~~l~~~~ 263 (392)
.+-...-....++.|.|+|.. ... .|+.|+-++-.+...-.- . ..-=..+..+.+.|+|.+.++.
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~L------Yav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~- 152 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYL------YAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH- 152 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCE------EEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-
T ss_pred EecccccccceEEEECCCCCE------EEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-
Confidence 111111112478999999983 444 568888887643211100 0 0011357899999999887777
Q ss_pred CCCcEEEEecCCcee------eeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecC
Q 016257 264 KDGDICVVDVKKMEI------NHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVP 320 (392)
Q Consensus 264 ~dg~i~iwd~~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 320 (392)
|+.++-....+... ...+.... -..-..+.|.+++.+.++. +| ++|....+
T Consensus 153 -dg~lyr~~~P~~~~~~wl~~~~~~g~~g-~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 153 -GQQFYKALPPVSNQDNWLARATKIGQGG-WDTFKFLFFSSVGTLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp -TTEEEEECCCSSTTCCHHHHCEEEESSS-GGGEEEEEECTTSCEEEEE--TT--EEEEESCC
T ss_pred -CCcEEecCCCCCCCcccccccceeccCC-cceEEEEEECCCCcEEEEe--CC--eEEecCCc
Confidence 77754333332110 11111111 2244557789998876666 66 56665544
No 322
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.41 E-value=0.023 Score=49.59 Aligned_cols=145 Identities=10% Similarity=0.027 Sum_probs=92.8
Q ss_pred cCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCC---CcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCcee---
Q 016257 163 SLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS---DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK--- 236 (392)
Q Consensus 163 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~--- 236 (392)
+.+|..++.+- ++.||.-++......+.+.... -..+..+..+|+|.. ++.. .+..|.|-.+..+..
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~l-----LAl~-g~~~V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDL-----LCLF-NDNEIFVMEVPWGYSNVE 101 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSE-----EEEE-CSSEEEEEECCTTCSCCC
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCE-----EEEe-cCCeEEEEEecCccccCc
Confidence 34555555553 3678888877554455555442 225788999999995 3333 455788888773210
Q ss_pred ---------eeeecc------cCCCcEEEEECCC---CCEEEEEeCCCcEEEEecCCce-eeeeee--------ccccCc
Q 016257 237 ---------IGHKRL------LRKPASVLSISLD---GKYLAMGSKDGDICVVDVKKME-INHWSK--------RLHLGT 289 (392)
Q Consensus 237 ---------~~~~~~------~~~~v~~~~~s~~---~~~l~~~~~dg~i~iwd~~~~~-~~~~~~--------~~~~~~ 289 (392)
.+.+.. ...+|..+.|+|- +..|++-..|+.|++||+.... .+..+. ... ..
T Consensus 102 ~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~-~~ 180 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDAR-VN 180 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSS-CC
T ss_pred ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcc-cc
Confidence 111111 2467999999995 5789999999999999998521 111111 011 26
Q ss_pred ceEEEEEeeCCCeEEEEe--CCCeEEEE
Q 016257 290 SIALVEFCPTQRVVLTAS--KEWGAMIT 315 (392)
Q Consensus 290 ~i~~~~~s~~~~~l~~~~--~dg~i~iw 315 (392)
.|.+++|.+++-.|...+ ..|-|+-.
T Consensus 181 ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 181 DITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred eEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 789999999887776655 77877653
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.40 E-value=0.023 Score=49.65 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=75.7
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccce------------eeccccCCCCCCCCCeEEEEecC---CCCEEE
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDI------------NLLAKKMPPLQDAGPQKCLSFSV---DGSRFA 128 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~ 128 (392)
+.|..+..+|+|++||..+.. .|.|-.+..+.... .+..... ......+|..+.|+| .+..|+
T Consensus 66 ~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~-~~~~~s~I~qVlWHPl~~~ds~LV 143 (452)
T 3pbp_A 66 DDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE-EVGPKSSIKKVLFHPKSYRDSCIV 143 (452)
T ss_dssp CTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC-C--CCCCEEEEEECTTBGGGCEEE
T ss_pred CceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCc-ccCCCCceeEEEeccccCCCCeEE
Confidence 368889999999999987555 59999987432111 1111111 111357899999999 456899
Q ss_pred EEeCCCcEEEEeCCCCc-eeeccc---------CCCCcEEEEEecCCCCeEEEEc--CCCcEEEE
Q 016257 129 AGGVDGHLRIMHWPSLR-IILDEP---------KAHKSVLDMDFSLDSEFLATTS--TDGSARIW 181 (392)
Q Consensus 129 ~~~~dg~i~i~d~~~~~-~~~~~~---------~~~~~i~~i~~~~~~~~l~~~~--~d~~i~vw 181 (392)
+-..|+.|++||+.... ....+. .....|.+++|.+++-.|...+ ++|.|+-.
T Consensus 144 VLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 144 VLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999999997522 111111 1114688999998776666644 66766543
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.29 E-value=0.053 Score=45.84 Aligned_cols=217 Identities=12% Similarity=-0.009 Sum_probs=103.6
Q ss_pred CCCeEEEEeCC----CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC----C-----CcEEEEe
Q 016257 74 SGDDFVCSTTN----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV----D-----GHLRIMH 140 (392)
Q Consensus 74 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-----g~i~i~d 140 (392)
++..++.|+.+ ..+.+||..+.+.... . ..+ ....-.+++. .++..++.|+. + ..+.+||
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~--~-~~p---~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d 96 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL--A-DLQ---VPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYN 96 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEEC--C-CCS---SCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeEC--C-CCC---cccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEEC
Confidence 45566666632 3477787766542211 1 111 1111112222 25666666665 2 4688999
Q ss_pred CCCCceeecc--cCCCCcEEEEEecCCCCeEEEEcCC-----CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcce
Q 016257 141 WPSLRIILDE--PKAHKSVLDMDFSLDSEFLATTSTD-----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (392)
Q Consensus 141 ~~~~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (392)
..+.+..... .........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+....-.+++.. ++. +
T Consensus 97 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i- 171 (308)
T 1zgk_A 97 PMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRL-L- 171 (308)
T ss_dssp TTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE-E-
T ss_pred CCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCE-E-
Confidence 8876543221 111112222222 56667776643 3588999887654322111111111122222 332 1
Q ss_pred EEEEEEeCC-----ccEEEEEeCCCceee--eeecccCCCcEEEEECCCCCEEEEEeCC-----CcEEEEecCCceeeee
Q 016257 214 LFCTVQRGD-----KALLAVYDISTWNKI--GHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEINHW 281 (392)
Q Consensus 214 ~~~~~~~~~-----d~~i~v~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~ 281 (392)
.+.++. ...+.+||+.+.+-. ..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-...
T Consensus 172 ---yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 246 (308)
T 1zgk_A 172 ---YAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFV 246 (308)
T ss_dssp ---EEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred ---EEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence 244443 246889998765422 111111122223333 66777777754 5699999988765433
Q ss_pred eeccccCcceEEEEEeeCCCeEEEEeCC
Q 016257 282 SKRLHLGTSIALVEFCPTQRVVLTASKE 309 (392)
Q Consensus 282 ~~~~~~~~~i~~~~~s~~~~~l~~~~~d 309 (392)
............+. -++++++.|+.+
T Consensus 247 ~~~p~~r~~~~~~~--~~~~i~v~GG~~ 272 (308)
T 1zgk_A 247 APMKHRRSALGITV--HQGRIYVLGGYD 272 (308)
T ss_dssp CCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred CCCCCCccceEEEE--ECCEEEEEcCcC
Confidence 21111011222222 267777777754
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.22 E-value=0.052 Score=46.04 Aligned_cols=64 Identities=8% Similarity=-0.001 Sum_probs=35.9
Q ss_pred CCCEEEEEeCC--------CcEEEEeCCCCceeecc--cCCCCcEEEEEecCCCCeEEEEcC-C-----CcEEEEECCCC
Q 016257 123 DGSRFAAGGVD--------GHLRIMHWPSLRIILDE--PKAHKSVLDMDFSLDSEFLATTST-D-----GSARIWKTEDG 186 (392)
Q Consensus 123 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~-d-----~~i~vwd~~~~ 186 (392)
++..++.|+.+ ..+.+||..+.+-.... .........+. -+++.++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 55566666632 45899999876543221 11111122222 34666777765 2 46889998876
Q ss_pred ee
Q 016257 187 VA 188 (392)
Q Consensus 187 ~~ 188 (392)
+-
T Consensus 176 ~W 177 (315)
T 4asc_A 176 EW 177 (315)
T ss_dssp EE
T ss_pred eE
Confidence 54
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.20 E-value=0.092 Score=45.43 Aligned_cols=59 Identities=7% Similarity=-0.050 Sum_probs=35.6
Q ss_pred ceEEEEecCC-------CCcceEEEEEEeCCccEEEEEeCCCceeeeee---cccCCCcEEEEECCCCCEEEEE
Q 016257 199 KIELCRFSKD-------GTKPFLFCTVQRGDKALLAVYDISTWNKIGHK---RLLRKPASVLSISLDGKYLAMG 262 (392)
Q Consensus 199 ~v~~~~~~~~-------~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~ 262 (392)
....++|... +.. +++.-..+.|...+++.++..... ......+..+++.|||.+.++.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l-----~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKL-----FIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEE-----EEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred CcceeEEECCccCcccCCcE-----EEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 4566777643 332 345556677887777755433221 1223578899999999865543
No 327
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.06 E-value=0.24 Score=47.77 Aligned_cols=233 Identities=6% Similarity=-0.029 Sum_probs=127.1
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPS 143 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 143 (392)
..|.++.-.++|+. ..|+.. -+..++..+++...-....... ......|.++...++|. |-.|+..+-+.++|.++
T Consensus 373 ~~v~~i~~d~~g~l-Wigt~~-GL~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~ 448 (758)
T 3ott_A 373 NRIRHIYEDKEQQL-WIATDG-SINRYDYATRQFIHYNIVDNTG-TYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHK 448 (758)
T ss_dssp SCEEEEEECTTSCE-EEEETT-EEEEEETTTTEEEEEEEECCC---CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHH
T ss_pred CceEEEEECCCCCE-EEEeCC-cHhhcCcCCCcEEEeecCCCcC-CCCCceEEEEEEcCCCC-EEEEECCCceEEEcccc
Confidence 35888887777764 444544 4888887665432211101000 00234678888777774 55566666688888542
Q ss_pred C-----ceee---c---ccC-CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCC--CcceEEEEecCCC
Q 016257 144 L-----RIIL---D---EPK-AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNS--DEKIELCRFSKDG 209 (392)
Q Consensus 144 ~-----~~~~---~---~~~-~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~ 209 (392)
. .... . ... ....|.++...++|++.+.++..+-+..+|.++++......... ...+.++....+|
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g 528 (758)
T 3ott_A 449 LMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDG 528 (758)
T ss_dssp HHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTS
T ss_pred ccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCC
Confidence 1 1111 0 011 12358999999888866643444558889987765443221111 2357788877777
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCceeeee-e-cccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeecccc
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGH-K-RLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHL 287 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 287 (392)
. +..++..| +..||..+.+.... . ......+.++... +| .|..++.+| |..+|.++.+....-. .
T Consensus 529 ~------lWigt~~G-l~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g-~lWi~t~~G-l~~~~~~~~~~~~~~~--~- 595 (758)
T 3ott_A 529 L------LWVGFHGG-VMRINPKDESQQSISFGSFSNNEILSMTCV-KN-SIWVSTTNG-LWIIDRKTMDARQQNM--T- 595 (758)
T ss_dssp C------EEEEETTE-EEEECC--CCCCBCCCCC---CCEEEEEEE-TT-EEEEEESSC-EEEEETTTCCEEEC----C-
T ss_pred C------EEEEecCc-eEEEecCCCceEEecccCCCccceEEEEEC-CC-CEEEECCCC-eEEEcCCCceeEEecC--C-
Confidence 7 44555544 88888765543211 1 1123457777653 55 566666666 8888988776543211 1
Q ss_pred CcceEEEEEe-eCCCeEEEEeCCCeEEE
Q 016257 288 GTSIALVEFC-PTQRVVLTASKEWGAMI 314 (392)
Q Consensus 288 ~~~i~~~~~s-~~~~~l~~~~~dg~i~i 314 (392)
...+....+. ++| .|..|+.+|-+.+
T Consensus 596 ~~~~~~~~~~~~~G-~l~fG~~~Gl~~f 622 (758)
T 3ott_A 596 NKRFTSLLFDPKED-CVYLGGADGFGIS 622 (758)
T ss_dssp CCCCSEEEEETTTT-EEEEECBSEEEEE
T ss_pred CCceeeeEEECCCC-cEEEecCCceEEE
Confidence 2233344444 355 5666777765544
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.06 E-value=0.11 Score=43.84 Aligned_cols=189 Identities=13% Similarity=0.048 Sum_probs=92.1
Q ss_pred CCCeEEEEeC----C-----CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCC-----CcEEEE
Q 016257 74 SGDDFVCSTT----N-----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVD-----GHLRIM 139 (392)
Q Consensus 74 ~~~~l~~~~~----d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~ 139 (392)
++..++.|+. + ..+.+||..+.+... .. ..+. .......+.+ +++.++.|+.+ ..+.+|
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~--~~-~~p~--~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~y 142 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSP--CA-PMSV--PRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERY 142 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEE--CC-CCSS--CCBTCEEEEE--TTEEEEECCEETTEECCCEEEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeE--CC-CCCc--CccccEEEEE--CCEEEEEcCCCCCcccccEEEE
Confidence 5666677665 2 347777776554211 11 1110 1111222223 56666666543 468899
Q ss_pred eCCCCceeecc--cCCCCcEEEEEecCCCCeEEEEcCC-----CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcc
Q 016257 140 HWPSLRIILDE--PKAHKSVLDMDFSLDSEFLATTSTD-----GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 140 d~~~~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
|..+.+-.... .........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+....-.+++.. ++. +
T Consensus 143 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i 218 (308)
T 1zgk_A 143 EPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNC-I 218 (308)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE-E
T ss_pred CCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCE-E
Confidence 98876543221 111112222222 56677777654 4588999877654322111111111122222 333 2
Q ss_pred eEEEEEEeCCc-----cEEEEEeCCCceee--eeecccCCCcEEEEECCCCCEEEEEeCC-----CcEEEEecCCceee
Q 016257 213 FLFCTVQRGDK-----ALLAVYDISTWNKI--GHKRLLRKPASVLSISLDGKYLAMGSKD-----GDICVVDVKKMEIN 279 (392)
Q Consensus 213 ~~~~~~~~~~d-----~~i~v~d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~ 279 (392)
.+.++.+ ..+.+||+.+.+-. ..+.........+.+ ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 219 ----yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 219 ----YAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp ----EEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred ----EEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 3444432 56899998875432 111111112222332 56777777754 35788888876543
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.01 E-value=0.13 Score=43.61 Aligned_cols=212 Identities=10% Similarity=0.011 Sum_probs=101.9
Q ss_pred EEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC----C-------CcEEEEeCCCCce
Q 016257 78 FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV----D-------GHLRIMHWPSLRI 146 (392)
Q Consensus 78 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d-------g~i~i~d~~~~~~ 146 (392)
++.|+ ..+.+||..+.+-.. . ..+. ............++..++.|+. + ..+..||..+.+-
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~--~--~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYC--A--SLSS--QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEE--E--ECCC--CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEcC--CceEEECCCCCeEec--C--CCCC--CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 34444 458888887765322 1 1110 0112222233346777777773 1 1277889887654
Q ss_pred eecccCCCC--cEEEEEecCCCCeEEEEcCC--------CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEE
Q 016257 147 ILDEPKAHK--SVLDMDFSLDSEFLATTSTD--------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFC 216 (392)
Q Consensus 147 ~~~~~~~~~--~i~~i~~~~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 216 (392)
......... ....+.+ +++.++.|+.+ ..+.+||..+.+-...-..+....-.+++. .++. +
T Consensus 80 ~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~-i---- 151 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDL-V---- 151 (315)
T ss_dssp EECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTE-E----
T ss_pred EECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCE-E----
Confidence 321111111 1122222 56666666632 458899998765322111111111122222 2333 1
Q ss_pred EEEeCC------ccEEEEEeCCCcee--eeeecccCCCcEEEEECCCCCEEEEEeCCC-----cEEEEecCCceeeeeee
Q 016257 217 TVQRGD------KALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAMGSKDG-----DICVVDVKKMEINHWSK 283 (392)
Q Consensus 217 ~~~~~~------d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~ 283 (392)
.+.++. -..+.+||..+.+- +..+........++.+ ++++++.|+.++ .+.+||+.+.+-.....
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 344443 24688999886532 2222111112222333 667777877654 48899998876444321
Q ss_pred ccccCcceEEEEEeeCCCeEEEEeCC
Q 016257 284 RLHLGTSIALVEFCPTQRVVLTASKE 309 (392)
Q Consensus 284 ~~~~~~~i~~~~~s~~~~~l~~~~~d 309 (392)
..........+. -++++++.|+.+
T Consensus 230 ~p~~r~~~~~~~--~~~~l~v~GG~~ 253 (315)
T 4asc_A 230 FPQERSSLSLVS--LVGTLYAIGGFA 253 (315)
T ss_dssp CSSCCBSCEEEE--ETTEEEEEEEEE
T ss_pred CCCcccceeEEE--ECCEEEEECCcc
Confidence 111112222222 367778888764
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.97 E-value=0.14 Score=43.45 Aligned_cols=148 Identities=16% Similarity=0.119 Sum_probs=70.5
Q ss_pred CCCEEEEEeCC-------CcEEEEeCCCCceeecccCCCCcE-EEEEecCCCCeEEEEcC------CCcEEEEECCCCee
Q 016257 123 DGSRFAAGGVD-------GHLRIMHWPSLRIILDEPKAHKSV-LDMDFSLDSEFLATTST------DGSARIWKTEDGVA 188 (392)
Q Consensus 123 ~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~i-~~i~~~~~~~~l~~~~~------d~~i~vwd~~~~~~ 188 (392)
+++.++.|+.+ ..+.+||..+.+-........... .+++. .+++.++.|+. -..+.+||+.+.+-
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 56666777653 347888988765432211111111 11222 35666666663 23589999987754
Q ss_pred eEEEecCCCcceEEEEecCCCCcceEEEEEEeCC-----ccEEEEEeCCCcee--eeeecccCCCcEEEEECCCCCEEEE
Q 016257 189 WTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD-----KALLAVYDISTWNK--IGHKRLLRKPASVLSISLDGKYLAM 261 (392)
Q Consensus 189 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~ 261 (392)
...-.......-.+++.. ++ .++ +.++. ...+.+||+.+.+- +..+.........+. -++++++.
T Consensus 188 ~~~~~~p~~r~~~~~~~~-~~-~iy----v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~ 259 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAIH-KG-KIV----IAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAI 259 (318)
T ss_dssp EEECCCSSCCBSCEEEEE-TT-EEE----EEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEE
T ss_pred EECCCCCCCcccceEEEE-CC-EEE----EEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEE
Confidence 332111111111222222 33 322 23322 24678899876532 222211111222222 25667777
Q ss_pred EeCC--------------CcEEEEecCCceee
Q 016257 262 GSKD--------------GDICVVDVKKMEIN 279 (392)
Q Consensus 262 ~~~d--------------g~i~iwd~~~~~~~ 279 (392)
|+.+ ..+.+||+.+.+-.
T Consensus 260 GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 260 GGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp CCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred CCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 7653 34667777665543
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.96 E-value=0.071 Score=46.12 Aligned_cols=96 Identities=9% Similarity=0.081 Sum_probs=45.2
Q ss_pred CCCeEEEEeCC-CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeC-C---------CcEEEEeCC
Q 016257 74 SGDDFVCSTTN-GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGV-D---------GHLRIMHWP 142 (392)
Q Consensus 74 ~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d---------g~i~i~d~~ 142 (392)
++..++.|+.+ ..+.++|............. .+.. ....-..+.+ +++.++.|+. + ..+.+||..
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~-~p~~-~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAA-FPGG-PRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCC-CTTC-CCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCC-CCCC-cCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 55566666543 45777776532222222111 1100 1111122222 5666666665 2 468999998
Q ss_pred CCceeecccCC-CC--cEEEEEecCCCCeEEEEcCC
Q 016257 143 SLRIILDEPKA-HK--SVLDMDFSLDSEFLATTSTD 175 (392)
Q Consensus 143 ~~~~~~~~~~~-~~--~i~~i~~~~~~~~l~~~~~d 175 (392)
+.+-....... .. ....+. .+++.++.|+.+
T Consensus 95 ~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 76643222111 11 222222 457777778754
No 332
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.94 E-value=0.14 Score=43.06 Aligned_cols=202 Identities=10% Similarity=0.075 Sum_probs=110.8
Q ss_pred EEEcCCCCeEEEEeCCC--------------eEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEe--C
Q 016257 69 IAVNPSGDDFVCSTTNG--------------GCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGG--V 132 (392)
Q Consensus 69 ~~~sp~~~~l~~~~~d~--------------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~ 132 (392)
--+++++++|+.+.... .|+..++...+ ...... . .+..|++++++|+-.. .
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~--~~~l~~--------~--~~~~~s~~g~~Iy~~~~~~ 125 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG--STVLDP--------D--PCIYASLIGNYIYYLHYDT 125 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC--CEEEEC--------S--CEEEEEEETTEEEEEEESS
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc--ceEeec--------C--CccEEEEeCCEEEEEeecC
Confidence 45688999988776532 34444444332 222211 1 2347788899988776 3
Q ss_pred C--CcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcC-CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCC
Q 016257 133 D--GHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTST-DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDG 209 (392)
Q Consensus 133 d--g~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 209 (392)
+ ..|+..++..... ..+..+.. ..++++++.|+-.+. ..+|.+-++..+.... +... ... ..+.|++
T Consensus 126 ~~~~~Iy~~~~dGs~~-~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~-l~~~---~~~-~~~~P~g 195 (302)
T 3s25_A 126 QTATSLYRIRIDGEEK-KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL-FYDC---NCY-KPVVLDD 195 (302)
T ss_dssp SSCEEEEEEETTSCCC-EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE-EECS---CEE-EEEEEET
T ss_pred CCCceEEEEECCCCCe-EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE-EeCC---Ccc-ceeeecC
Confidence 3 4455556553322 22322221 456788888886665 5778888887655443 3222 222 3456888
Q ss_pred CcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeC--CCcEEEEecCCceeeeeeecccc
Q 016257 210 TKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSK--DGDICVVDVKKMEINHWSKRLHL 287 (392)
Q Consensus 210 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~ 287 (392)
..++. ........|..-++...... .+. ...+ ..|+|+++.|+.+.. .+.|..-++......... .
T Consensus 196 ~~iy~---t~~~~~~~I~~~~ldG~~~~-~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~-~--- 263 (302)
T 3s25_A 196 TNVYY---MDVNRDNAIVHVNINNPNPV-VLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELA-K--- 263 (302)
T ss_dssp TEEEE---EEGGGTTEEEEECSSSCCCE-ECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEE-E---
T ss_pred CEEEE---EEcCCCcEEEEEECCCCCeE-EEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEee-C---
Confidence 87431 22222357777787765432 222 2233 347888988876632 356777777654433332 2
Q ss_pred CcceEEEEEeeCCCeEEEEe
Q 016257 288 GTSIALVEFCPTQRVVLTAS 307 (392)
Q Consensus 288 ~~~i~~~~~s~~~~~l~~~~ 307 (392)
..+. .+++.+.+|+-..
T Consensus 264 -~~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 264 -GEFC--NINVTSQYVYFTD 280 (302)
T ss_dssp -SCEE--EEEECSSEEEEEE
T ss_pred -Cccc--eEEEeCCEEEEEE
Confidence 1233 4455666666655
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.92 E-value=0.13 Score=44.20 Aligned_cols=163 Identities=7% Similarity=0.001 Sum_probs=92.8
Q ss_pred CCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeE--EEe---cCCCcceEEEEecCC---CCcceEEEEEEeCCccE
Q 016257 154 HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT--FLT---RNSDEKIELCRFSKD---GTKPFLFCTVQRGDKAL 225 (392)
Q Consensus 154 ~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~--~~~---~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~d~~ 225 (392)
-.....|+|.|+|+++++--..|.|++++...++... .+. .........++++|+ +..+|+ ..+...++.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv--~yt~~~~~~ 108 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA--YFTSASDNR 108 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE--EEECSSSEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEE--EEecCCCCE
Confidence 3467899999999877766558999999876554322 111 112335789999996 343332 234345567
Q ss_pred EEEEeCCCc----------eee-eeec-ccCCCcEEEEECCCCCEEEEEeC-------------CCcEEEEecCCce---
Q 016257 226 LAVYDISTW----------NKI-GHKR-LLRKPASVLSISLDGKYLAMGSK-------------DGDICVVDVKKME--- 277 (392)
Q Consensus 226 i~v~d~~~~----------~~~-~~~~-~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~iwd~~~~~--- 277 (392)
|.-|.+... +.+ ..+. ........+.|.|||.+.++.+. .|+|.-.+....-
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 777766541 111 1111 11234457999999987766442 3556555654320
Q ss_pred ----eeeeeeccccCcceEEEEEeeCCCeEEEE-eCCCeEEEEEeecC
Q 016257 278 ----INHWSKRLHLGTSIALVEFCPTQRVVLTA-SKEWGAMITKLTVP 320 (392)
Q Consensus 278 ----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~ 320 (392)
....+..+| .....++|+|+|+++++= +.|+.-.|..+..+
T Consensus 189 nPf~~~~i~a~G~--RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G 234 (347)
T 3das_A 189 NPFPGSPVYSYGH--RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPG 234 (347)
T ss_dssp CSSTTCCEEEBCC--SBCCEEEECTTCCEEEEECCSSSCEEEEEECTT
T ss_pred CCCCCCeEEeeCC--CCcceEEECCCCCEEEEecCCCCCceeeEEcCC
Confidence 011222343 346789999988765543 33444555555433
No 334
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.90 E-value=0.18 Score=43.60 Aligned_cols=197 Identities=8% Similarity=-0.007 Sum_probs=105.2
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc-eeecc---cCCCCcEEEEEecCC---CCeEEEEcC----C----CcE
Q 016257 114 PQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR-IILDE---PKAHKSVLDMDFSLD---SEFLATTST----D----GSA 178 (392)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~---~~~~~~i~~i~~~~~---~~~l~~~~~----d----~~i 178 (392)
....++|.|+|+ |+++..+|.|++++ .+++ .+..+ .........|+++|+ +..|+++.. + ..|
T Consensus 30 ~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 468899999997 55556679999987 3444 22211 122346889999997 555554433 2 567
Q ss_pred EEEECCCC-------eee-EEEecCCCcceEEEEecCCCCcceEEEEEEeC------------CccEEEEEeCCCc----
Q 016257 179 RIWKTEDG-------VAW-TFLTRNSDEKIELCRFSKDGTKPFLFCTVQRG------------DKALLAVYDISTW---- 234 (392)
Q Consensus 179 ~vwd~~~~-------~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~------------~d~~i~v~d~~~~---- 234 (392)
..|+.... +.+ ..+..........++|.|+|.. | +..+. ..+.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~L-y---vt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGML-Y---ITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCE-E---EECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcE-E---EEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 77776543 111 1122111123467999999963 2 22221 1256666665432
Q ss_pred ----eeeeeecccCCCcEEEEECC-CCCEEEEEeCCC---cEEEEecCCcee----------------eeeeeccccCcc
Q 016257 235 ----NKIGHKRLLRKPASVLSISL-DGKYLAMGSKDG---DICVVDVKKMEI----------------NHWSKRLHLGTS 290 (392)
Q Consensus 235 ----~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg---~i~iwd~~~~~~----------------~~~~~~~~~~~~ 290 (392)
.......++ .....++|+| +|.++++-...+ .|.+.. .+.. .....-.+....
T Consensus 184 npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 184 NPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp SSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 000011122 2345799999 566555433222 233332 2210 000000011346
Q ss_pred eEEEEEe-------eCCCeEEEEeCCCeEEEEEeec
Q 016257 291 IALVEFC-------PTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 291 i~~~~~s-------~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
...++|. .+|.++++.-..+.|...++..
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 7888883 5677777766677777777764
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.89 E-value=0.18 Score=51.17 Aligned_cols=236 Identities=10% Similarity=0.073 Sum_probs=132.7
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCcee
Q 016257 68 TIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRII 147 (392)
Q Consensus 68 ~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 147 (392)
+.-.+|..+.+|.-. ..+++|+|+++........ ...+|.-=.|-.+. .|+..+ +..|+.|++.....+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~--------~~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P 138 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT--------MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP 138 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhcccc--------cCCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCcc
Confidence 344578777776653 6779999998876433322 23456666665444 444433 567999999754333
Q ss_pred eccc-CC----CCcEEEEEecCCCCeEEEEc-------CCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEE
Q 016257 148 LDEP-KA----HKSVLDMDFSLDSEFLATTS-------TDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 148 ~~~~-~~----~~~i~~i~~~~~~~~l~~~~-------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
.... .| ...|..-..+++.++++..+ -.|.+.+|..+.+. .+.+.+|.. ....+....+.....++
T Consensus 139 ~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~-~F~~~~~~~~~~~~~l~ 216 (1630)
T 1xi4_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA-SFAQFKMEGNAEESTLF 216 (1630)
T ss_pred HHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHh-hhheeccCCCCCCceEE
Confidence 3332 22 13677777889999877543 34788899886442 233333321 22222222111111122
Q ss_pred EEEEe-CCccEEEEEeCCCc---eeeee------eccc---CCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 216 CTVQR-GDKALLAVYDISTW---NKIGH------KRLL---RKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 216 ~~~~~-~~d~~i~v~d~~~~---~~~~~------~~~~---~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
|++.- ...+.++|-++... .+... +... ..-..++..|+.-..++.-+.-|.|++||+.++..+..-
T Consensus 217 ~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred EEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhc
Confidence 33322 23468888887542 11100 0010 112235777887778888899999999999999877654
Q ss_pred eccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 283 KRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 283 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
. .. ..+|...+-+....-++.....|.|.--.++
T Consensus 297 r-is-~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 297 R-IS-GETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred c-cc-CCceEEeccCCCCCceEEEcCCceEEEEEEc
Confidence 2 22 4455554444443345555566666555554
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.87 E-value=0.011 Score=46.60 Aligned_cols=102 Identities=11% Similarity=0.055 Sum_probs=62.9
Q ss_pred ceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCC--------cEEEEECCCCCEEEEEeCCCcEEE
Q 016257 199 KIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKP--------ASVLSISLDGKYLAMGSKDGDICV 270 (392)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~~~~~dg~i~i 270 (392)
.+..++|+|++.. ... .++.++-.+..+.....-+. .... -.++.|.|+|.+.++ .||.|+-
T Consensus 42 ~~~~laf~P~G~L------YaV-~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr 111 (236)
T 1tl2_A 42 NFKFLFLSPGGEL------YGV-LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYK 111 (236)
T ss_dssp TCSEEEECTTSCE------EEE-ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEE
T ss_pred cceeEEECCCccE------EEE-eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEEE
Confidence 5789999998872 333 66777777765422110000 0111 367899999988877 5698988
Q ss_pred EecCCceeeeeeeccc-----cCcceEEEEEeeCCCeEEEEeCCCeE
Q 016257 271 VDVKKMEINHWSKRLH-----LGTSIALVEFCPTQRVVLTASKEWGA 312 (392)
Q Consensus 271 wd~~~~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~~dg~i 312 (392)
++-.+......+..+. .-..+..|.|.|+|.+.+.. |+.+
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 8764422222211110 02578999999999877666 7774
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.87 E-value=0.17 Score=42.86 Aligned_cols=178 Identities=12% Similarity=0.046 Sum_probs=85.2
Q ss_pred ecCCCCEEEEEeC----CC-------cEEEEeCCCCceeec--ccCCCCcEEEEEecCCCCeEEEEcCC-------CcEE
Q 016257 120 FSVDGSRFAAGGV----DG-------HLRIMHWPSLRIILD--EPKAHKSVLDMDFSLDSEFLATTSTD-------GSAR 179 (392)
Q Consensus 120 ~s~~~~~l~~~~~----dg-------~i~i~d~~~~~~~~~--~~~~~~~i~~i~~~~~~~~l~~~~~d-------~~i~ 179 (392)
...++..++.|+. ++ .+..||..+.+.... +.........+.+ +++.++.|+.+ ..+.
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 3456777777773 12 177888877654322 1111111222222 56677777653 2478
Q ss_pred EEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCC------ccEEEEEeCCCcee--eeeecccCCCcEEEE
Q 016257 180 IWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGD------KALLAVYDISTWNK--IGHKRLLRKPASVLS 251 (392)
Q Consensus 180 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~------d~~i~v~d~~~~~~--~~~~~~~~~~v~~~~ 251 (392)
+||..+.+-...-..+....-.+++. .++. + .+.++. ...+.+||..+.+- +..+.........+.
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-i----yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 204 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVIS-HNGM-I----YCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI 204 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEE-ETTE-E----EEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred EEeCCCCCEeECCCCCCcccccEEEE-ECCE-E----EEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE
Confidence 88988765433211111101112222 2333 2 233432 24588999887542 222211111222233
Q ss_pred ECCCCCEEEEEeCC-----CcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCC
Q 016257 252 ISLDGKYLAMGSKD-----GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKE 309 (392)
Q Consensus 252 ~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 309 (392)
+ ++++++.|+.+ ..+.+||+.+.+-...............+ ..++++++.|+.+
T Consensus 205 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~ 263 (318)
T 2woz_A 205 H--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV--SLAGSLYAIGGFA 263 (318)
T ss_dssp E--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE--EETTEEEEECCBC
T ss_pred E--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE--EECCEEEEECCee
Confidence 2 56777777653 34778998876644322111101122222 2367777777754
No 338
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.78 E-value=0.2 Score=42.25 Aligned_cols=225 Identities=12% Similarity=0.076 Sum_probs=124.3
Q ss_pred CceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCC
Q 016257 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGP 114 (392)
Q Consensus 35 ~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 114 (392)
..+++|+++.+ ..+..+.+ .+.|.--.|-.+ +.|+-.+.. .|+-|++.......+..... ..+ ....
T Consensus 87 ~~LQiFnletK------~klks~~~---~e~VvfWkWis~-~~L~lVT~t-aVyHWs~~~~s~P~kvFdR~-~~L-~~~Q 153 (365)
T 2xzh_A 87 KTLQIFNIEMK------SKMKAHTM---TDDVTFWKWISL-NTVALVTDN-AVYHWSMEGESQPVKMFDRH-SSL-AGCQ 153 (365)
T ss_dssp TEEEEEETTTT------EEEEEEEC---SSCEEEEEECSS-SEEEEEESS-EEEEEESSTTCCCEEEEECC-GGG-TTCE
T ss_pred CeEEEechHHh------hhhcceec---CCccEEEEecCC-CeEEEEcCC-cEEEEcccCCCCCceeeecc-hhc-ccce
Confidence 44888888733 12222222 357777778644 355555444 49999997644333332221 111 1356
Q ss_pred eEEEEecCCCCEEEEEe-------CCCcEEEEeCCCCceeecccCCCCcEEEEEecCC---CCeEEEEcC---CCcEEEE
Q 016257 115 QKCLSFSVDGSRFAAGG-------VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLD---SEFLATTST---DGSARIW 181 (392)
Q Consensus 115 v~~~~~s~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~---~~~l~~~~~---d~~i~vw 181 (392)
|..-.-+++.++++..+ -.|.+.+|..+.+.. +.+.+|......+...-+ ...+..+.. .+++.+-
T Consensus 154 IInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIi 232 (365)
T 2xzh_A 154 IINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 232 (365)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-ceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEE
Confidence 77777888888876543 237789999876433 334455433333332211 123333332 2578888
Q ss_pred ECCCC---ee-----eEEEecCC---CcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEE
Q 016257 182 KTEDG---VA-----WTFLTRNS---DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVL 250 (392)
Q Consensus 182 d~~~~---~~-----~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~ 250 (392)
++... .+ ...+..+. .+-.-++..++.... +..-..-|.|++||++++.++..-+.....|...
T Consensus 233 Ei~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygv-----iyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 233 EVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-----VFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 307 (365)
T ss_dssp ECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTE-----EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCE-----EEEEeCCcEEEEEEcccCcEEEEeccCCCceEEe
Confidence 87432 11 11111111 122334555555443 3445567899999999999987777766777655
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCcee
Q 016257 251 SISLDGKYLAMGSKDGDICVVDVKKMEI 278 (392)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 278 (392)
+-+.+..=++.....|.|.--.++....
T Consensus 308 a~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 308 APHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred cccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 5544444455555677776666655443
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.0096 Score=50.88 Aligned_cols=189 Identities=6% Similarity=-0.018 Sum_probs=103.9
Q ss_pred CeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEec--CCCCcceEEEEEEe-CCccEEEEEeCCCceeeeeecc-
Q 016257 167 EFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFS--KDGTKPFLFCTVQR-GDKALLAVYDISTWNKIGHKRL- 242 (392)
Q Consensus 167 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~-~~d~~i~v~d~~~~~~~~~~~~- 242 (392)
..++.++.||.|.-+|.++|+..-++......++....-. +.+... ++.. ..||.|..+|..++.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~----~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYET----LIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEE----EEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcE----EEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 4688899999999999999999888765411122111100 111120 2333 6899999999888754432221
Q ss_pred ---cCCCcEE---EEE-----CCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcc-----eEEEEEe-----eCCC
Q 016257 243 ---LRKPASV---LSI-----SLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTS-----IALVEFC-----PTQR 301 (392)
Q Consensus 243 ---~~~~v~~---~~~-----s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----i~~~~~s-----~~~~ 301 (392)
...++.. ..+ +..+..+++|+.+|++.-.|+++|+.+..+..+..... ..+.... ..+.
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~ 166 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECEN 166 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CC
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCC
Confidence 1112221 001 01456889999999999999999998887643321111 1111111 1234
Q ss_pred eEEEEeCCCeEEEEEeecCccccceeeeeeee-eeee-----------eceEEEEeeecceeeeeccccccccc
Q 016257 302 VVLTASKEWGAMITKLTVPADWKEWQIYSLLL-ALFL-----------ASAVVFYIFFENSDSFWNFPVARNQH 363 (392)
Q Consensus 302 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~d~~i~~W~~~~~~~~~ 363 (392)
.|+.+..+..+.+.+ +.+ ..|...+... .... ..+..++++.|+.+.-.|..+|+.+.
T Consensus 167 ~v~ig~~~y~v~~~~-~sG---~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 167 MIVIGKTIFELGIHS-YDG---ASYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEEECEECC-TTS---CCCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred eEEEecceEEEEEEC-CCC---CeEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 677777776666655 222 1454322111 0000 11344667778888888877777664
No 340
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.62 E-value=0.37 Score=43.29 Aligned_cols=111 Identities=12% Similarity=0.085 Sum_probs=59.9
Q ss_pred CCeeEEEEcCCCC-eEEEEeCCCeEEEEEEeCCccceeeccc--cCCC---CCCCCCeEEEEecCC---CCEEEEE-eC-
Q 016257 64 GDPMTIAVNPSGD-DFVCSTTNGGCKLFEVYGGATDINLLAK--KMPP---LQDAGPQKCLSFSVD---GSRFAAG-GV- 132 (392)
Q Consensus 64 ~~v~~~~~sp~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~~~~---~~~~~~v~~~~~s~~---~~~l~~~-~~- 132 (392)
.....|+|.|+|. .|+++...|.|++++.........+... .... .........++|+|+ ..+|++. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4678999999996 4556678999998864322111111100 0000 012457889999996 2344333 21
Q ss_pred -C----------CcEEEEeCCCC----------ceeeccc--CCCCcEEEEEecCCCCeEEEEcC
Q 016257 133 -D----------GHLRIMHWPSL----------RIILDEP--KAHKSVLDMDFSLDSEFLATTST 174 (392)
Q Consensus 133 -d----------g~i~i~d~~~~----------~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~ 174 (392)
+ ..|.-|.+..+ +.+.... .....-..|+|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13444554321 1222221 11124678999999987776654
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.57 E-value=0.29 Score=46.69 Aligned_cols=202 Identities=10% Similarity=0.053 Sum_probs=102.2
Q ss_pred CCCCeEEEEeCC----CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC-CCCEEEEEeCC------CcEEEEeC
Q 016257 73 PSGDDFVCSTTN----GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVD------GHLRIMHW 141 (392)
Q Consensus 73 p~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d------g~i~i~d~ 141 (392)
-++..++.|+.+ ..+.+||..+.+..................-.+++..+ +++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 45888888776532221010000011111112333333 67777777643 35889998
Q ss_pred CCCceeecccCCCC-cEEEEEecCCCCeEEEEcCCC--cEEEEECCCCeeeEEEe---cC-CCcceEEEEecCCCCcceE
Q 016257 142 PSLRIILDEPKAHK-SVLDMDFSLDSEFLATTSTDG--SARIWKTEDGVAWTFLT---RN-SDEKIELCRFSKDGTKPFL 214 (392)
Q Consensus 142 ~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~---~~-~~~~v~~~~~~~~~~~~~~ 214 (392)
.+.+....-..... .-.+++...+++.++.|+.++ .+.+||..+.+-...-. .+ ......++.+..+...+
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i-- 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG-- 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE--
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE--
Confidence 87654322111111 112223323778888887654 68999998765432211 00 11112335555553332
Q ss_pred EEEEEeCC-------ccEEEEEeCCCce--------eeeeec-ccCCCcEEEEECCCCCEEEEEeCC--------CcEEE
Q 016257 215 FCTVQRGD-------KALLAVYDISTWN--------KIGHKR-LLRKPASVLSISLDGKYLAMGSKD--------GDICV 270 (392)
Q Consensus 215 ~~~~~~~~-------d~~i~v~d~~~~~--------~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~i 270 (392)
.+.|+. ...+.+||+.+.+ .+.... ....... +....++++++.|+.+ ..+.+
T Consensus 554 --yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 630 (695)
T 2zwa_A 554 --IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITPRKLLIVGGTSPSGLFDRTNSIIS 630 (695)
T ss_dssp --EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEETTEEEEECCBCSSCCCCTTTSEEE
T ss_pred --EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCCCEEEEECCccCCCCCCCCCeEEE
Confidence 234443 2568899988765 111111 1111222 2333336777777743 45999
Q ss_pred EecCCceee
Q 016257 271 VDVKKMEIN 279 (392)
Q Consensus 271 wd~~~~~~~ 279 (392)
||+.+.+-.
T Consensus 631 yd~~t~~W~ 639 (695)
T 2zwa_A 631 LDPLSETLT 639 (695)
T ss_dssp EETTTTEEE
T ss_pred EECCCCeEE
Confidence 999887654
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.0079 Score=51.39 Aligned_cols=146 Identities=12% Similarity=0.087 Sum_probs=83.7
Q ss_pred CEEEEEeCCCcEEEEeCCCCceeecccCCC-CcEEEEEe--cC-CCCeEEEE-cCCCcEEEEECCCCeeeEEEecCC---
Q 016257 125 SRFAAGGVDGHLRIMHWPSLRIILDEPKAH-KSVLDMDF--SL-DSEFLATT-STDGSARIWKTEDGVAWTFLTRNS--- 196 (392)
Q Consensus 125 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~i~~--~~-~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~--- 196 (392)
..+++++.||.|.-+|.++|+...++.... .++....- .+ ++..++.. +.||.+..++..++.....+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 378889999999999999999877665431 22221110 11 22333333 689999999998886554443211
Q ss_pred CcceEE---EEe------cCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccC--CC-----cEEEEEC-----CC
Q 016257 197 DEKIEL---CRF------SKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLR--KP-----ASVLSIS-----LD 255 (392)
Q Consensus 197 ~~~v~~---~~~------~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~-----v~~~~~s-----~~ 255 (392)
..++.. ... +.++. +++++.++.+...|+++|+.+..+.... .. ..|.... ..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~------Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~ 164 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEK------VYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQEC 164 (339)
T ss_dssp TCSEEEECC----------CCEE------EEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------
T ss_pred ccccccCCCceeecccccccCCE------EEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccC
Confidence 011111 001 12333 6889999999999999999887665421 10 1111111 12
Q ss_pred CCEEEEEeCCCcEEEEecCCce
Q 016257 256 GKYLAMGSKDGDICVVDVKKME 277 (392)
Q Consensus 256 ~~~l~~~~~dg~i~iwd~~~~~ 277 (392)
+..++.+..+..+.+.+ ++++
T Consensus 165 ~~~v~ig~~~y~v~~~~-~sG~ 185 (339)
T 2be1_A 165 ENMIVIGKTIFELGIHS-YDGA 185 (339)
T ss_dssp CCEEEEEEEEEECEECC-TTSC
T ss_pred CCeEEEecceEEEEEEC-CCCC
Confidence 45677777777777766 4443
No 343
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.34 E-value=0.49 Score=41.60 Aligned_cols=225 Identities=12% Similarity=0.070 Sum_probs=126.4
Q ss_pred CceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCC
Q 016257 35 SVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGP 114 (392)
Q Consensus 35 ~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 114 (392)
..+++|+++.. .....+.+ .+.|.--.|-.+ +.|+-.+. ..|+-|++.......+..... ..+ ....
T Consensus 86 ~~lQiFnle~K------~klks~~~---~e~VvfWkWis~-~~l~lVT~-taVyHWsi~~~s~P~kvFdR~-~~L-~~~Q 152 (494)
T 1bpo_A 86 KTLQIFNIEMK------SKMKAHTM---TDDVTFWKWISL-NTVALVTD-NAVYHWSMEGESQPVKMFDRH-SSL-AGCQ 152 (494)
T ss_dssp TEEEEEETTTT------EEEEEEEC---SSCCCEEEEEET-TEEEEECS-SEEEEEESSSSCCCEEEEECC-GGG-TTCE
T ss_pred CeEEEEchHHh------hhhcceec---CCCceEEEecCC-CeEEEEcC-CeeEEecccCCCCchhheecc-hhc-ccce
Confidence 45778887633 12222222 346777777543 35555444 459999997643333332211 111 1356
Q ss_pred eEEEEecCCCCEEEEEe-------CCCcEEEEeCCCCceeecccCCCCcEEEEEecCCC---CeEEEEcC---CCcEEEE
Q 016257 115 QKCLSFSVDGSRFAAGG-------VDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDS---EFLATTST---DGSARIW 181 (392)
Q Consensus 115 v~~~~~s~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~---~~l~~~~~---d~~i~vw 181 (392)
|..-.-+++.++++..+ -.|.+.+|..+.+.. +.+.+|......+....+. ..+..+.. .+++.+-
T Consensus 153 IInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~ 231 (494)
T 1bpo_A 153 IINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 231 (494)
T ss_dssp EEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEE
T ss_pred EEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEE
Confidence 77777888999877543 247789999876543 3345554444444332211 23333433 2678888
Q ss_pred ECCCC--------eeeEEEecC---CCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEE
Q 016257 182 KTEDG--------VAWTFLTRN---SDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVL 250 (392)
Q Consensus 182 d~~~~--------~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~ 250 (392)
++... +....+..+ ..+-.-++..++.... +..-..-|.|++||+.++.++..-+.....|...
T Consensus 232 Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv-----iyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t 306 (494)
T 1bpo_A 232 EVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-----VFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 306 (494)
T ss_dssp ECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE-----EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE-----EEEEecCceEEEEecccceeeeeecccCCceEEe
Confidence 88543 111111111 1222345666665554 3445577899999999999987777666676665
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCcee
Q 016257 251 SISLDGKYLAMGSKDGDICVVDVKKMEI 278 (392)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 278 (392)
+-+....=++.....|.|.--.+.....
T Consensus 307 ~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 307 APHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred cccCCCCcEEEEccCceEEEEEEccccc
Confidence 5555544555555677766666655443
No 344
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.10 E-value=0.73 Score=41.29 Aligned_cols=164 Identities=12% Similarity=0.106 Sum_probs=89.2
Q ss_pred CcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeE--EEecC-----CCcceEEEEecCC---CCcceEEEEEEe----
Q 016257 155 KSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWT--FLTRN-----SDEKIELCRFSKD---GTKPFLFCTVQR---- 220 (392)
Q Consensus 155 ~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~--~~~~~-----~~~~v~~~~~~~~---~~~~~~~~~~~~---- 220 (392)
.....|+|.|+|+++++-...+.|++++..+++... .+... .......++|+|+ +..+|+......
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 356799999999877765444578888765554322 22110 1234678999997 555443221100
Q ss_pred CC----ccEEEEEeCCCc-------eeee-eec-ccCCCcEEEEECCCCCEEEEEeCC----------------------
Q 016257 221 GD----KALLAVYDISTW-------NKIG-HKR-LLRKPASVLSISLDGKYLAMGSKD---------------------- 265 (392)
Q Consensus 221 ~~----d~~i~v~d~~~~-------~~~~-~~~-~~~~~v~~~~~s~~~~~l~~~~~d---------------------- 265 (392)
.. ...|.-++.... +.+. .+. ........++|.|||++.++.+..
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~ 186 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQE 186 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHH
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcccccccccccccccccc
Confidence 00 245666655321 1111 111 112457889999999876664421
Q ss_pred ----------CcEEEEecCCce----------eeeeeeccccCcceEEEEEeeCCCeEEEE-eCCCeEEEEEeecC
Q 016257 266 ----------GDICVVDVKKME----------INHWSKRLHLGTSIALVEFCPTQRVVLTA-SKEWGAMITKLTVP 320 (392)
Q Consensus 266 ----------g~i~iwd~~~~~----------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~ 320 (392)
|+|.-++....- ....+..+| .....++|+|+|+++++- +.++.-.|..+..+
T Consensus 187 ~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~--RNp~gla~dp~G~L~~~d~g~~~~dein~i~~G 260 (454)
T 1cru_A 187 LNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGH--RNPQGLAFTPNGKLLQSEQGPNSDDEINLIVKG 260 (454)
T ss_dssp HHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCC--SEEEEEEECTTSCEEEEEECSSSCEEEEECCTT
T ss_pred ccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECC--CCcceEEECCCCCEEEEecCCCCCeEEEEecCC
Confidence 334444443220 122222343 457889999988755543 34555666666543
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.96 E-value=0.69 Score=39.80 Aligned_cols=64 Identities=5% Similarity=0.026 Sum_probs=34.5
Q ss_pred CCCEEEEEeC-CCcEEEEeCCC--Ccee--eccc-CCCCcEEEEEecCCCCeEEEEcC-C---------CcEEEEECCCC
Q 016257 123 DGSRFAAGGV-DGHLRIMHWPS--LRII--LDEP-KAHKSVLDMDFSLDSEFLATTST-D---------GSARIWKTEDG 186 (392)
Q Consensus 123 ~~~~l~~~~~-dg~i~i~d~~~--~~~~--~~~~-~~~~~i~~i~~~~~~~~l~~~~~-d---------~~i~vwd~~~~ 186 (392)
++..++.|+. ...+.+||+.+ .+.. ..+. ........+.+ ++++++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5656666654 35688999864 3322 1112 11112222222 4666777765 2 46889999876
Q ss_pred ee
Q 016257 187 VA 188 (392)
Q Consensus 187 ~~ 188 (392)
+-
T Consensus 97 ~W 98 (357)
T 2uvk_A 97 SW 98 (357)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.64 E-value=1.3 Score=40.39 Aligned_cols=224 Identities=13% Similarity=0.129 Sum_probs=123.2
Q ss_pred EEEEeCCCcEEEEeCCCCceeecccCC-------------------------CC--cEEEEEec---CCCCeEEEEc-CC
Q 016257 127 FAAGGVDGHLRIMHWPSLRIILDEPKA-------------------------HK--SVLDMDFS---LDSEFLATTS-TD 175 (392)
Q Consensus 127 l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------------------~~--~i~~i~~~---~~~~~l~~~~-~d 175 (392)
|.+|+..|.++|+-+.+++.+..+.-. .+ .-..+++. .||++|+.-. .+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 677888999999998887765443100 00 01123332 2678877766 45
Q ss_pred CcEEEEECCCCeeeEEEecCCCcceEEEEec--CCCCcceEEEEEEeCC-------ccE------------EEEEeCCCc
Q 016257 176 GSARIWKTEDGVAWTFLTRNSDEKIELCRFS--KDGTKPFLFCTVQRGD-------KAL------------LAVYDISTW 234 (392)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~-------d~~------------i~v~d~~~~ 234 (392)
..|...+++..++.+.+..+....+..++|- |+..+ ++.+++ ||. ....|..+.
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~y-----v~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm 227 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKY-----VFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETM 227 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCE-----EEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTC
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccE-----EEecceeeccCCCCCcccccCChhhceEEEEEcCCcc
Confidence 6788889999888887777666678888886 45554 232222 111 111222222
Q ss_pred eeeeeecccCCCcEEEEECCCCCEEEEEeCCC---------------cEEEEec-------------------------C
Q 016257 235 NKIGHKRLLRKPASVLSISLDGKYLAMGSKDG---------------DICVVDV-------------------------K 274 (392)
Q Consensus 235 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---------------~i~iwd~-------------------------~ 274 (392)
+...+... .+........++|++.++.+.+. .+.++|+ +
T Consensus 228 ~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~ 306 (638)
T 3sbq_A 228 EMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGR 306 (638)
T ss_dssp SEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECS
T ss_pred EEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccc
Confidence 22111111 22333456677888877766431 2444444 2
Q ss_pred C----ce-eeeeeeccccCcceEEEEEeeCCCeEEEEe-CCCeEEEEEeecCcc--------cc---ce--eeeeeeeee
Q 016257 275 K----ME-INHWSKRLHLGTSIALVEFCPTQRVVLTAS-KEWGAMITKLTVPAD--------WK---EW--QIYSLLLAL 335 (392)
Q Consensus 275 ~----~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~--------~~---~~--~~~~~~~~~ 335 (392)
. +. ....+.. ......+..+|||++++.++ .+.++.++++..-.. .. .- .+-.-+...
T Consensus 307 ~~~~~~~~~~~~iP~---pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt 383 (638)
T 3sbq_A 307 KKDGKDSKFTRYVPV---PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHT 383 (638)
T ss_dssp CBTTBCCSSEEEEEE---SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEE
T ss_pred cccccCCceEEEEeC---CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEE
Confidence 2 11 1111111 23456788999999887766 478999999984211 00 00 111122222
Q ss_pred eee-ceEE-EEeeecceeeeeccccc
Q 016257 336 FLA-SAVV-FYIFFENSDSFWNFPVA 359 (392)
Q Consensus 336 ~~~-~~~~-~~~~~d~~i~~W~~~~~ 359 (392)
... .+.. .+.+.|..|--|++...
T Consensus 384 ~Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 384 TFDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred EECCCCceEeeeeecceEEEEeccHH
Confidence 222 2222 23347999999999865
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.46 E-value=1.4 Score=42.00 Aligned_cols=192 Identities=7% Similarity=0.035 Sum_probs=97.6
Q ss_pred CCCCEEEEEeCC----CcEEEEeCCCCceeecc-c------CCCCcEEEEEecC-CCCeEEEEcCC------CcEEEEEC
Q 016257 122 VDGSRFAAGGVD----GHLRIMHWPSLRIILDE-P------KAHKSVLDMDFSL-DSEFLATTSTD------GSARIWKT 183 (392)
Q Consensus 122 ~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~-~------~~~~~i~~i~~~~-~~~~l~~~~~d------~~i~vwd~ 183 (392)
.++..++.|+.+ ..+.+||..+++..... . .....-.+++..+ +++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 46889998877543222 1 1111112333333 67777777754 35789998
Q ss_pred CCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCcc--EEEEEeCCCceeeee-----ecccCCCcEEEEECCC-
Q 016257 184 EDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA--LLAVYDISTWNKIGH-----KRLLRKPASVLSISLD- 255 (392)
Q Consensus 184 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~--~i~v~d~~~~~~~~~-----~~~~~~~v~~~~~s~~- 255 (392)
.+.+-...-..+....-.+++...++.. .+.|+.++ .+.+||..+.+-... .........++.+..+
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~i-----yv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~ 550 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNV-----LILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVS 550 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCE-----EEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTT
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEE-----EEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCC
Confidence 8764332211111111122333234442 34444332 689999887542211 1111222334555555
Q ss_pred CCEEEEEeC--C-----CcEEEEecCCce------eeeeee-ccccCcceEEEEEeeCCCeEEEEeCC--------CeEE
Q 016257 256 GKYLAMGSK--D-----GDICVVDVKKME------INHWSK-RLHLGTSIALVEFCPTQRVVLTASKE--------WGAM 313 (392)
Q Consensus 256 ~~~l~~~~~--d-----g~i~iwd~~~~~------~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~d--------g~i~ 313 (392)
+++++.|+. + +.+.+||+.+.+ ...... ......... +....++++++.|+.+ ..+.
T Consensus 551 ~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp TEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred CEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 667777765 2 358899998876 222111 011012222 2333347788888743 4577
Q ss_pred EEEeec
Q 016257 314 ITKLTV 319 (392)
Q Consensus 314 iw~~~~ 319 (392)
+||+..
T Consensus 630 ~yd~~t 635 (695)
T 2zwa_A 630 SLDPLS 635 (695)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 777653
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.52 E-value=2.7 Score=38.27 Aligned_cols=240 Identities=12% Similarity=0.097 Sum_probs=126.8
Q ss_pred EEEEeCCCeEEEEEEeCCccceeeccccCCCCC------------------CCCCe--EEEEecC---CCCEEEEEe-CC
Q 016257 78 FVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQ------------------DAGPQ--KCLSFSV---DGSRFAAGG-VD 133 (392)
Q Consensus 78 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~------------------~~~~v--~~~~~s~---~~~~l~~~~-~d 133 (392)
+.+|+..|.|+|+-+.+.+....+......... ..+.. ..+++.. ||++|+.-. .+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 668889999999999888764443221110000 01111 2334432 677787765 35
Q ss_pred CcEEEEeCCCCceeeccc-CCCCcEEEEEec--CCCCeEEEEcC-------CCcEE------------EEECCCCeeeEE
Q 016257 134 GHLRIMHWPSLRIILDEP-KAHKSVLDMDFS--LDSEFLATTST-------DGSAR------------IWKTEDGVAWTF 191 (392)
Q Consensus 134 g~i~i~d~~~~~~~~~~~-~~~~~i~~i~~~--~~~~~l~~~~~-------d~~i~------------vwd~~~~~~~~~ 191 (392)
..|...+++..++-..+. .....+..+.|- |+..+++.+++ ||... ..|..+.+...+
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 667777887766533222 223468888886 67788887764 23210 112222222111
Q ss_pred EecCCCcceEEEEecCCCCcceEEEE----------EEeCCccEEEEEeC-------------------------CC---
Q 016257 192 LTRNSDEKIELCRFSKDGTKPFLFCT----------VQRGDKALLAVYDI-------------------------ST--- 233 (392)
Q Consensus 192 ~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~~~d~~i~v~d~-------------------------~~--- 233 (392)
+... .....+...+++.+.+..+. .+.++...+.+++. +.
T Consensus 233 v~v~--gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~ 310 (638)
T 3sbq_A 233 VIVD--GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDG 310 (638)
T ss_dssp EEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTT
T ss_pred EEcC--CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccc
Confidence 1111 12223444555554211000 11112233444443 32
Q ss_pred -ceeeeeecccCCCcEEEEECCCCCEEEEEe-CCCcEEEEecCCcee-----e----ee-eeccccCcceEEEEEeeCCC
Q 016257 234 -WNKIGHKRLLRKPASVLSISLDGKYLAMGS-KDGDICVVDVKKMEI-----N----HW-SKRLHLGTSIALVEFCPTQR 301 (392)
Q Consensus 234 -~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~-----~----~~-~~~~~~~~~i~~~~~s~~~~ 301 (392)
+..+..+.........+..+|||+++++++ -+.++.++|+++... + .. .............+|.++|.
T Consensus 311 ~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~ 390 (638)
T 3sbq_A 311 KDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN 390 (638)
T ss_dssp BCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE
T ss_pred cCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc
Confidence 111111111123344688999999988776 478899999985221 0 00 00111255778899999996
Q ss_pred eEEEEeCCCeEEEEEeec
Q 016257 302 VVLTASKEWGAMITKLTV 319 (392)
Q Consensus 302 ~l~~~~~dg~i~iw~~~~ 319 (392)
...+--.|..|.-|++..
T Consensus 391 aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 391 AYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEEETTTTEEEEEEHHH
T ss_pred eEeeeeecceEEEEeccH
Confidence 556666899999999974
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.41 E-value=2.9 Score=34.62 Aligned_cols=226 Identities=8% Similarity=-0.052 Sum_probs=115.2
Q ss_pred CeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 016257 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSL 144 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 144 (392)
.|..++....- .++. . ||.|+.|-........... .....|..++...+- .++. . ||.|+.|-....
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~-------~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~ 91 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPA-------ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNED 91 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCG-------GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTT
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCc-------cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCC
Confidence 56667664332 2333 4 8989998765433221100 112356677665433 3333 4 899999976533
Q ss_pred ceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCcc
Q 016257 145 RIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKA 224 (392)
Q Consensus 145 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~ 224 (392)
..+-.-......|..++...+. .+.-. ||.|+.|-....-.+.. .......|..++...... ++.. ++
T Consensus 92 Gqlg~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~~~~------~~l~--~G 159 (282)
T 3qhy_B 92 GQTTVPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTV-PAEAQSGVTALDGGVYTA------LAVK--NG 159 (282)
T ss_dssp STTCCCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSEE------EEEE--TT
T ss_pred CCCCCCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCC-CccCCCCeEEEEcccCEE------EEEE--CC
Confidence 2211111112367777766443 33334 89999997654222111 111122465555443322 2222 68
Q ss_pred EEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEE
Q 016257 225 LLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVL 304 (392)
Q Consensus 225 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 304 (392)
.++.|-......+.........|..++...+ ..++. .||.|+.|-....-.+-.. ... ...|..++-..+ +.+
T Consensus 160 ~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg~p-~~~-~~~v~~i~~G~~--h~~ 232 (282)
T 3qhy_B 160 GVIAWGDNYFGQTTVPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTTVP-TEA-LSGVSAIASGEW--YSL 232 (282)
T ss_dssp EEEEEECCTTSTTSCCGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTCCC-GGG-GSSCCEEEECSS--CEE
T ss_pred EEEEecCCCCCCCCCceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCCCC-ccc-CCCceEEEcCCC--EEE
Confidence 8999976643322222222356777766543 23333 5899999965442211111 111 345777765443 333
Q ss_pred EEeCCCeEEEEEeecCccc
Q 016257 305 TASKEWGAMITKLTVPADW 323 (392)
Q Consensus 305 ~~~~dg~i~iw~~~~~~~~ 323 (392)
.-. ||.+..|-.+.....
T Consensus 233 al~-~g~v~~wG~n~~gq~ 250 (282)
T 3qhy_B 233 ALK-NGKVIAWGSSRTAPS 250 (282)
T ss_dssp EEE-TTEEEEESTTCCCCG
T ss_pred EEE-CCEEEEecCCCCccc
Confidence 333 999999977654443
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.06 E-value=2.5 Score=43.27 Aligned_cols=172 Identities=9% Similarity=0.039 Sum_probs=97.8
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEc--C-CCCeEEEE
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVN--P-SGDDFVCS 81 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s--p-~~~~l~~~ 81 (392)
..|..-.-+++.+.+.+++.+... ....|.+++|+.+..- .+.+.||.+....+... + ....++.+
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~--~~v~G~mQLyS~er~~---------sQ~iegha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQ--NRVVGAMQLYSVDRKV---------SQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCC--Ccccceeeeeeccccc---------chhhhHhHhhhheeccCCCCCCceEEEEE
Confidence 455555666776664444443333 3578999999987443 23356666655444442 1 12233333
Q ss_pred eC---CCeEEEEEEeCC-ccceeeccc----cCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCC
Q 016257 82 TT---NGGCKLFEVYGG-ATDINLLAK----KMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKA 153 (392)
Q Consensus 82 ~~---d~~i~iw~~~~~-~~~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 153 (392)
.+ .+.++|-++... .....+..+ ..++-.......++..|+.-..++..+.-|.+.+||++++.++..-.-.
T Consensus 220 ~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris 299 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (1630)
T ss_pred EecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcccc
Confidence 32 267888888553 111111110 1111112344567777887668888888999999999999987655544
Q ss_pred CCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCe
Q 016257 154 HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGV 187 (392)
Q Consensus 154 ~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~ 187 (392)
...|...+-+....-++.....|.|.-..+....
T Consensus 300 ~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 300 GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred CCceEEeccCCCCCceEEEcCCceEEEEEEccch
Confidence 4556555544433335555566766655555443
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.67 E-value=3.7 Score=33.92 Aligned_cols=225 Identities=7% Similarity=-0.089 Sum_probs=111.2
Q ss_pred CCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEE
Q 016257 113 GPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFL 192 (392)
Q Consensus 113 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 192 (392)
..|..++....- .++. . ||.|+.|-......+.........|..++...... ++. . ||.++.|-....-.+..
T Consensus 24 ~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~- 96 (282)
T 3qhy_B 24 SGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTV- 96 (282)
T ss_dssp SSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCC-
T ss_pred CCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCC-
Confidence 356777665432 2333 5 89999997654322211111223577776654332 333 4 89999997654222111
Q ss_pred ecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEe
Q 016257 193 TRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVD 272 (392)
Q Consensus 193 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 272 (392)
.......|..++...... ++.. ++.|+.|-......+.........|..++...+ +.+.-. ||.|+.|-
T Consensus 97 P~~~~~~v~~ia~G~~hs------~al~--~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG 165 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAWAS------YALK--DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWG 165 (282)
T ss_dssp CGGGSSSEEEEEEETTEE------EEEE--TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEE
T ss_pred CcccCCCeEEEECcCCEE------EEEe--CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEec
Confidence 111122466666654433 2333 889999976543322222222345766665433 333334 78999996
Q ss_pred cCCceeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCccccce-eeeeeeeeeee-eceEEEEeeecce
Q 016257 273 VKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPADWKEW-QIYSLLLALFL-ASAVVFYIFFENS 350 (392)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~d~~ 350 (392)
......+... ... ...|..++...+. .++. .||.+..|-.+....+..- .....+..... ....++. . |+.
T Consensus 166 ~n~~gqlg~p-~~~-~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al-~-~g~ 238 (282)
T 3qhy_B 166 DNYFGQTTVP-AEA-QSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLAL-K-NGK 238 (282)
T ss_dssp CCTTSTTSCC-GGG-GSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEE-E-TTE
T ss_pred CCCCCCCCCc-eec-CCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEE-E-CCE
Confidence 5542211111 111 3567777765432 2333 5899999977644332110 00000111111 1223333 3 899
Q ss_pred eeeecccccccc
Q 016257 351 DSFWNFPVARNQ 362 (392)
Q Consensus 351 i~~W~~~~~~~~ 362 (392)
++.|=.....++
T Consensus 239 v~~wG~n~~gq~ 250 (282)
T 3qhy_B 239 VIAWGSSRTAPS 250 (282)
T ss_dssp EEEESTTCCCCG
T ss_pred EEEecCCCCccc
Confidence 999976654333
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.00 E-value=10 Score=33.92 Aligned_cols=19 Identities=11% Similarity=-0.062 Sum_probs=15.4
Q ss_pred CCcEEEEECCCCCEEEEEe
Q 016257 245 KPASVLSISLDGKYLAMGS 263 (392)
Q Consensus 245 ~~v~~~~~s~~~~~l~~~~ 263 (392)
..+..+...|||.++++..
T Consensus 336 ~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 336 GHILGFGEDELGEVYILSS 354 (463)
T ss_dssp SEEEEEEECTTCCEEEEEE
T ss_pred CcceEEEECCCCCEEEEec
Confidence 4688999999998877765
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=89.99 E-value=14 Score=35.28 Aligned_cols=198 Identities=11% Similarity=0.029 Sum_probs=103.4
Q ss_pred EEEE-ecCCCCEEEEE-eCC----CcEEEEeCCCCceeecccCCC--C------cEEEEEecCCCCeEEEE---------
Q 016257 116 KCLS-FSVDGSRFAAG-GVD----GHLRIMHWPSLRIILDEPKAH--K------SVLDMDFSLDSEFLATT--------- 172 (392)
Q Consensus 116 ~~~~-~s~~~~~l~~~-~~d----g~i~i~d~~~~~~~~~~~~~~--~------~i~~i~~~~~~~~l~~~--------- 172 (392)
..+. ++|++++++.+ +.. ..++++|+++++.+..-.... . ....++|..+...+++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 4455 88999887654 222 469999999987764322210 1 11344776433333331
Q ss_pred -cCCCcEEEEECCCCe--eeEEEecCCCcceEEEEecCCCCcc--eEEEEEE-eCCccEEEEEeCCC--ceeeeeecccC
Q 016257 173 -STDGSARIWKTEDGV--AWTFLTRNSDEKIELCRFSKDGTKP--FLFCTVQ-RGDKALLAVYDIST--WNKIGHKRLLR 244 (392)
Q Consensus 173 -~~d~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~-~~~d~~i~v~d~~~--~~~~~~~~~~~ 244 (392)
+...+|+.|.+-+.. -...+.......-.....++++... ++++... +.....+.+.|... ++.. .+....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-EeecCC
Confidence 122468888876542 2223333333223345567777753 2221112 23346677777653 3322 222212
Q ss_pred CCcEEEEECCCCCEEEEE----------eCCCcEEEEecCCce-------eeee-eeccccCcceEEEEEeeCCCeEEEE
Q 016257 245 KPASVLSISLDGKYLAMG----------SKDGDICVVDVKKME-------INHW-SKRLHLGTSIALVEFCPTQRVVLTA 306 (392)
Q Consensus 245 ~~v~~~~~s~~~~~l~~~----------~~dg~i~iwd~~~~~-------~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~ 306 (392)
. . .+..+.++.+++.. ...+.|...|+.++. .... +.... ...+..+.|..+ .++++.
T Consensus 291 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~-~l~~~~ 366 (711)
T 4hvt_A 291 D-A-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTA-NEVFNFISTTKD-RVFLAT 366 (711)
T ss_dssp T-C-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCT-TEEEEEEEECSS-CEEEEE
T ss_pred c-c-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCC-CCeEEEEEEECC-EEEEEE
Confidence 1 1 23334556555532 246779999987642 1111 22222 567888998865 577777
Q ss_pred eCCCeEE--EEEee
Q 016257 307 SKEWGAM--ITKLT 318 (392)
Q Consensus 307 ~~dg~i~--iw~~~ 318 (392)
..++.-+ ++++.
T Consensus 367 ~~~~~~~l~~~~~~ 380 (711)
T 4hvt_A 367 YDNVVAKVVTFTLE 380 (711)
T ss_dssp EETTEEEEEEECEE
T ss_pred EECCEEEEEEEECC
Confidence 7777544 45544
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=89.60 E-value=9.6 Score=33.00 Aligned_cols=168 Identities=5% Similarity=-0.061 Sum_probs=86.7
Q ss_pred cEEEEeCCCC--ceeecccC------CCCcEEEEEec---CC----CCeEEEEc-CCCcEEEEECCCCeeeEEEec---C
Q 016257 135 HLRIMHWPSL--RIILDEPK------AHKSVLDMDFS---LD----SEFLATTS-TDGSARIWKTEDGVAWTFLTR---N 195 (392)
Q Consensus 135 ~i~i~d~~~~--~~~~~~~~------~~~~i~~i~~~---~~----~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~---~ 195 (392)
+|.+||+.++ +.+.++.- ....+..+.+. |+ +.+++.+. ....|.|+|+.+++..+.+.. .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4677788777 66544322 22357888887 22 23433333 457799999998877665421 0
Q ss_pred C--------------CcceEEEEecCC----CCcceEEEEEEeCCccEEEEEe---CCCc---eeeeeeccc--CCCcEE
Q 016257 196 S--------------DEKIELCRFSKD----GTKPFLFCTVQRGDKALLAVYD---ISTW---NKIGHKRLL--RKPASV 249 (392)
Q Consensus 196 ~--------------~~~v~~~~~~~~----~~~~~~~~~~~~~~d~~i~v~d---~~~~---~~~~~~~~~--~~~v~~ 249 (392)
. ...+..++++|+ ++.+|+ -..++ ..++--. ++.. ..++.+... ......
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf--~plss--~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~ 279 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYY--LAGSA--IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIA 279 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEE--EESSC--SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEE--EECCC--CcEEEEEHHHhhCcchhhceEEeeecCCCCCcce
Confidence 0 124677888887 554332 11111 1122111 1111 111111111 123345
Q ss_pred EEEC-CCCCEEEEEeCCCcEEEEecCC-c---eeeeeeeccccCcceEEEEEeeCCCeEEEE
Q 016257 250 LSIS-LDGKYLAMGSKDGDICVVDVKK-M---EINHWSKRLHLGTSIALVEFCPTQRVVLTA 306 (392)
Q Consensus 250 ~~~s-~~~~~l~~~~~dg~i~iwd~~~-~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 306 (392)
+++. .+|.++++--..+.|..|+..+ . +....+.....-..+..+++.++|.+.+..
T Consensus 280 ~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 280 LAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 6775 5677777777788899999876 1 111111111113456677776666544444
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=86.97 E-value=14 Score=31.93 Aligned_cols=243 Identities=10% Similarity=-0.021 Sum_probs=108.6
Q ss_pred CCCeeEEEEcC-CCCeEEEEeCCC--eEEEEEEeCCccceeecccc--CCCCC------CCCCeEEEEecC-C-CCEEEE
Q 016257 63 EGDPMTIAVNP-SGDDFVCSTTNG--GCKLFEVYGGATDINLLAKK--MPPLQ------DAGPQKCLSFSV-D-GSRFAA 129 (392)
Q Consensus 63 ~~~v~~~~~sp-~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~--~~~~~------~~~~v~~~~~s~-~-~~~l~~ 129 (392)
...|.+|++.| +...|.++...+ .-.||....+.......... ..... ....|.++++.| + ...|.+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 45799999998 333444444444 11344444333222222111 00000 112577889987 2 456666
Q ss_pred EeCCCcEEEEeCCCCc---eeeccc----------------CCCCcEEEEEecCC-CCeEEEEcCCCcEEEEECCCCeee
Q 016257 130 GGVDGHLRIMHWPSLR---IILDEP----------------KAHKSVLDMDFSLD-SEFLATTSTDGSARIWKTEDGVAW 189 (392)
Q Consensus 130 ~~~dg~i~i~d~~~~~---~~~~~~----------------~~~~~i~~i~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~ 189 (392)
+...+.|...+ ..++ .+.... .....+.+|.++|. ...|+.+..++.|...+ ..++..
T Consensus 134 g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW 211 (394)
T 3b7f_A 134 GTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDW 211 (394)
T ss_dssp EEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSC
T ss_pred EecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCc
Confidence 66566555443 2222 111110 01235789999883 44455554444444332 223332
Q ss_pred EEEecCC------------CcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCceeeeeecc--cC---CCcEEEEE
Q 016257 190 TFLTRNS------------DEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRL--LR---KPASVLSI 252 (392)
Q Consensus 190 ~~~~~~~------------~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~--~~---~~v~~~~~ 252 (392)
..+.... ...+.+++++|..... +..+...+ |...+-. ++.-..+.. .. ..+..+++
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~----l~vg~~~g-l~~s~D~-G~tW~~~~~~l~~~~~~~~~~i~~ 285 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDI----LYQQNHCG-IYRMDRR-EGVWKRIGDAMPREVGDIGFPIVV 285 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTE----EEEEETTE-EEEEETT-TTEEECGGGGSCTTTCSCEEEEEE
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCE----EEEEcCCe-EEEeCCC-CCcceECCCCCCCCCccceEEEEE
Confidence 2222110 1247889999874321 33333333 4444322 222111111 11 23567888
Q ss_pred CCC-CCEEEEEeC-----------CCcEEEEecCC-ceeeeeeeccccCc------ceEEEEEeeCC-CeEEEEeCCCeE
Q 016257 253 SLD-GKYLAMGSK-----------DGDICVVDVKK-MEINHWSKRLHLGT------SIALVEFCPTQ-RVVLTASKEWGA 312 (392)
Q Consensus 253 s~~-~~~l~~~~~-----------dg~i~iwd~~~-~~~~~~~~~~~~~~------~i~~~~~s~~~-~~l~~~~~dg~i 312 (392)
+|. ...|+++.. ++...+|.... ++.-..+..+-... ....++++|.. ..|+.++.++.|
T Consensus 286 ~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l 365 (394)
T 3b7f_A 286 HQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEI 365 (394)
T ss_dssp CSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCE
T ss_pred CCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeE
Confidence 763 344444432 33345565443 23222221111010 12357787753 456666656554
Q ss_pred E
Q 016257 313 M 313 (392)
Q Consensus 313 ~ 313 (392)
.
T Consensus 366 ~ 366 (394)
T 3b7f_A 366 W 366 (394)
T ss_dssp E
T ss_pred E
Confidence 4
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.33 E-value=31 Score=34.19 Aligned_cols=38 Identities=13% Similarity=0.131 Sum_probs=33.3
Q ss_pred cEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe
Q 016257 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT 193 (392)
Q Consensus 156 ~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 193 (392)
.+.++...++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777888888899999999999999999999888764
No 357
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=84.16 E-value=20 Score=31.07 Aligned_cols=186 Identities=9% Similarity=-0.007 Sum_probs=94.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCc-----------eeecccC-CCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCC-----
Q 016257 124 GSRFAAGGVDGHLRIMHWPSLR-----------IILDEPK-AHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG----- 186 (392)
Q Consensus 124 ~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~----- 186 (392)
....+.-..||.|+.|-..... ....+.. ....+..++.+.-....+.-..||.|+.|-....
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 3455555678888888543210 1111111 1123555666665566666678899999965321
Q ss_pred ------eeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCCce-----------eeeee-cccCCCcE
Q 016257 187 ------VAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDISTWN-----------KIGHK-RLLRKPAS 248 (392)
Q Consensus 187 ------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~-----------~~~~~-~~~~~~v~ 248 (392)
.....+.......|..++.... + .+.-..++.|+.|-..... ..... ......+.
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G~~--h-----s~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAGGA--H-----SACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEECSS--E-----EEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEE
T ss_pred CCCccCcCCeEecccCCCeEEEEEeCcC--e-----EEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEE
Confidence 0111111111223444444322 2 2334457888888654311 01111 11234566
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCc-----------eeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEe
Q 016257 249 VLSISLDGKYLAMGSKDGDICVVDVKKM-----------EINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKL 317 (392)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 317 (392)
.++......+.+.-..||.|+.|-.... ..+..+.... ...|..++.. ..+.++-..||.|..|-.
T Consensus 215 ~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~-~~~v~~v~~G--~~hs~alt~~G~v~~wG~ 291 (389)
T 3kci_A 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT-GLGVVKVECG--SQFSVALTKSGAVYTWGK 291 (389)
T ss_dssp EEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGT-TSCEEEEEEE--TTEEEEEETTSCEEEEEC
T ss_pred EEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccC-CCcEEEEeCC--CCEEEEEeCCCeEEEEeC
Confidence 7766543456666778999999954321 1111111111 2346666654 335555678899999976
Q ss_pred ec
Q 016257 318 TV 319 (392)
Q Consensus 318 ~~ 319 (392)
..
T Consensus 292 n~ 293 (389)
T 3kci_A 292 GD 293 (389)
T ss_dssp CG
T ss_pred CC
Confidence 53
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.20 E-value=42 Score=33.28 Aligned_cols=38 Identities=16% Similarity=-0.004 Sum_probs=32.5
Q ss_pred CCcEEEEECCCCCEEEEEeCCCcEEEEecCCceeeeee
Q 016257 245 KPASVLSISLDGKYLAMGSKDGDICVVDVKKMEINHWS 282 (392)
Q Consensus 245 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 282 (392)
..+.+++..++..++++-+.|+++|+|++.+++++...
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35667788888899999999999999999999877654
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.72 E-value=46 Score=33.78 Aligned_cols=38 Identities=13% Similarity=0.131 Sum_probs=31.8
Q ss_pred cEEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEe
Q 016257 156 SVLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLT 193 (392)
Q Consensus 156 ~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 193 (392)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34555667788899999999999999999999988764
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=81.09 E-value=5.2 Score=36.98 Aligned_cols=59 Identities=17% Similarity=0.316 Sum_probs=42.5
Q ss_pred cEEEEECCCCCEEEEEeCC------------CcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEE
Q 016257 247 ASVLSISLDGKYLAMGSKD------------GDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTA 306 (392)
Q Consensus 247 v~~~~~s~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 306 (392)
.-.|+|+|.|.+++.-..+ +.+.+.+..++++.+.+. .+....++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CCCCccCcCeeECCCCCEEEEE
Confidence 3568999999976654322 236666777788776654 4448899999999999877654
No 361
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=79.77 E-value=27 Score=29.51 Aligned_cols=120 Identities=14% Similarity=0.088 Sum_probs=72.9
Q ss_pred CCCeeEEEEcC---CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEE
Q 016257 63 EGDPMTIAVNP---SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIM 139 (392)
Q Consensus 63 ~~~v~~~~~sp---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 139 (392)
.+.|.++..-+ +..++++.+.+|.++--.+........ .......+.....+..+........|+..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-GGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-SCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-CceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 34555554433 467899999999999887755332211 11111112234556666555556678888889998888
Q ss_pred eCC--CCce---------eecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECC
Q 016257 140 HWP--SLRI---------ILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE 184 (392)
Q Consensus 140 d~~--~~~~---------~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~ 184 (392)
... .-.. ...+ .....|.++...+++..++..+..|.++.-.+.
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRF-NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCC-CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred ECcccccCcCCcCCCCeeeecC-CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 765 2111 1111 223356666666666788889999998888764
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=78.04 E-value=33 Score=29.64 Aligned_cols=140 Identities=6% Similarity=-0.076 Sum_probs=82.7
Q ss_pred cEEEEECCCC--eeeEEEecC-----CCcceEEEEec---CC--CCcceEEEEEEeCCccEEEEEeCCCceeeeeec---
Q 016257 177 SARIWKTEDG--VAWTFLTRN-----SDEKIELCRFS---KD--GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKR--- 241 (392)
Q Consensus 177 ~i~vwd~~~~--~~~~~~~~~-----~~~~v~~~~~~---~~--~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--- 241 (392)
+|.+||+.+. +.++++..+ ....+..+++. |. ...-+. .++-....-|.|+|+.+++..+...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~a--YItD~~~~gLIVydl~~~~swRv~~~~~ 201 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFV--YITNFLRGALFIYDHKKQDSWNVTHPTF 201 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEE--EEEETTTTEEEEEETTTTEEEEEECGGG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEE--EEEcCCCCcEEEEECCCCcEEEEccCCC
Confidence 5777888887 777766542 12357778877 22 112122 3555567889999999876543331
Q ss_pred -cc--------------CCCcEEEEECCC----CCEEEEEeCCCcEEEEecCC-----ceeeeeee-cccc--CcceEEE
Q 016257 242 -LL--------------RKPASVLSISLD----GKYLAMGSKDGDICVVDVKK-----MEINHWSK-RLHL--GTSIALV 294 (392)
Q Consensus 242 -~~--------------~~~v~~~~~s~~----~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~-~~~~--~~~i~~~ 294 (392)
.. ...+..++++|+ ++.|+...-.+ -++|.+.+ ......+. .+.. .+.-..+
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 10 236778999998 78888776554 34444432 11111110 1110 1233455
Q ss_pred EEe-eCCCeEEEEeCCCeEEEEEeec
Q 016257 295 EFC-PTQRVVLTASKEWGAMITKLTV 319 (392)
Q Consensus 295 ~~s-~~~~~l~~~~~dg~i~iw~~~~ 319 (392)
+.. .+|.++++--..+.|..|+...
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 665 5677777777888999999875
No 363
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=76.51 E-value=33 Score=28.72 Aligned_cols=198 Identities=13% Similarity=0.040 Sum_probs=106.7
Q ss_pred CCCCeEEEEeCCCeEEEEEEeCCccceee-ccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCC---C-----
Q 016257 73 PSGDDFVCSTTNGGCKLFEVYGGATDINL-LAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWP---S----- 143 (392)
Q Consensus 73 p~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~---~----- 143 (392)
|+...+++.+.+|.|+--.+..-+....- .......+.....+..+........++..+..|.++-.... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45667888899999987766443221110 00001112234556666555556677777888987766542 1
Q ss_pred -Cceeecc--cCCCCcEEEEEecC---CCCeEEEEcCCCcEEEEECCCCee-----eEEEecCCCcceEEEEecCCCCcc
Q 016257 144 -LRIILDE--PKAHKSVLDMDFSL---DSEFLATTSTDGSARIWKTEDGVA-----WTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 144 -~~~~~~~--~~~~~~i~~i~~~~---~~~~l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
|..+... ......|..+...+ +..+++..+.+|.++...+..-.. +..+.....+.+-.+....+...
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~- 164 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEK- 164 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCE-
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCE-
Confidence 1111111 11223455554332 456788889999999888743211 11111122334544444433343
Q ss_pred eEEEEEEeCCccEEEEEeCCCcee-------eeeecc-cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNK-------IGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKK 275 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~-------~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 275 (392)
++..+.+|.+..+....-.. +..+.. ....+..+..-+++..+++.+..|..+..++..
T Consensus 165 ----i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 165 ----VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp ----EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred ----EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 56667778888887653211 111111 134556665555667788889999999888754
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=76.03 E-value=13 Score=34.12 Aligned_cols=61 Identities=15% Similarity=0.299 Sum_probs=42.7
Q ss_pred CCcEEEEECCCCCEEEEEeC------------CCcEEEEecCCceeeeeeeccccCcceEEEEEeeCCCeEEEE
Q 016257 245 KPASVLSISLDGKYLAMGSK------------DGDICVVDVKKMEINHWSKRLHLGTSIALVEFCPTQRVVLTA 306 (392)
Q Consensus 245 ~~v~~~~~s~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 306 (392)
.....+.|+++|.+.++... .+.+..++..++++...+. ......++.++|+||++.|+++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~-~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe-CCCCccccCCEECCCCCEEEEE
Confidence 34567999999987773321 1257777777788766553 3225679999999999977665
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=75.37 E-value=32 Score=28.13 Aligned_cols=119 Identities=11% Similarity=0.048 Sum_probs=73.4
Q ss_pred CCCeeEEEEcC-CCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeC
Q 016257 63 EGDPMTIAVNP-SGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW 141 (392)
Q Consensus 63 ~~~v~~~~~sp-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 141 (392)
.+.|..+.... +..+++..+.+|.++-..+..-. ... .......+.....+..+....+...++..+..|.+..+..
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~-~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YKA-QGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TCS-TTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hhc-CCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 55666664421 46789999999999988876543 111 1111122233456666666666668888889999888875
Q ss_pred CC---------CceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECC
Q 016257 142 PS---------LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTE 184 (392)
Q Consensus 142 ~~---------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~ 184 (392)
.. |.....+. ....|..+...+++..++..+..|.++...+.
T Consensus 145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 32 11111122 22456666555556688888889998888764
No 366
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=74.52 E-value=41 Score=28.98 Aligned_cols=217 Identities=8% Similarity=-0.051 Sum_probs=98.8
Q ss_pred CeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecC-CCCEEEEEeCCC----cEEEEeCCCCc---ee
Q 016257 76 DDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDG----HLRIMHWPSLR---II 147 (392)
Q Consensus 76 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg----~i~i~d~~~~~---~~ 147 (392)
..|+.|...| +.+++...+.......... .....|.++++.| +...|.++...| .|...+ ..++ .+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~----~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~ 96 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPV----FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEA 96 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEE----STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEEC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCcc----CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceEC
Confidence 3677777777 6555544321112111101 1235689999998 334455555444 344332 2222 11
Q ss_pred ec---ccC--------CCCcEEEEEecC-C-CCeEEEEcCCCcEEEEECCCCeeeEEEec------------------CC
Q 016257 148 LD---EPK--------AHKSVLDMDFSL-D-SEFLATTSTDGSARIWKTEDGVAWTFLTR------------------NS 196 (392)
Q Consensus 148 ~~---~~~--------~~~~i~~i~~~~-~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~------------------~~ 196 (392)
.. +.. ....|.++++.| + ...+..++..+.|...+- .++.-..+.. ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCC
Confidence 11 011 112577899987 2 455666655555544432 2332222211 11
Q ss_pred CcceEEEEecCCC-CcceEEEEEEeCCccEEEEEeCC--Cceeeee-eccc---------CCCcEEEEECCC-CCEEEEE
Q 016257 197 DEKIELCRFSKDG-TKPFLFCTVQRGDKALLAVYDIS--TWNKIGH-KRLL---------RKPASVLSISLD-GKYLAMG 262 (392)
Q Consensus 197 ~~~v~~~~~~~~~-~~~~~~~~~~~~~d~~i~v~d~~--~~~~~~~-~~~~---------~~~v~~~~~s~~-~~~l~~~ 262 (392)
...+.++.++|.. .. +..+..++.|...+-. +.+.+.. .... ...+.++.++|+ ...|+++
T Consensus 176 ~~~i~~i~~d~~~~~~-----l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg 250 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKH-----LYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQ 250 (394)
T ss_dssp CCEEEEEEECTTCTTC-----EEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEE
T ss_pred CCceeEEEECCCCCCE-----EEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEE
Confidence 2357889998843 33 2333323334433221 1222111 0000 124788999986 4667777
Q ss_pred eCCCcEEEEecCCceeeeeeeccccC---cceEEEEEeeC-CCeEEEE
Q 016257 263 SKDGDICVVDVKKMEINHWSKRLHLG---TSIALVEFCPT-QRVVLTA 306 (392)
Q Consensus 263 ~~dg~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~-~~~l~~~ 306 (392)
...+ |...+- .++.-..+...... ..+..++++|. ...|..+
T Consensus 251 ~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 251 NHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp ETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred cCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 6554 544442 22222222111102 34567888763 3344444
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.71 E-value=14 Score=34.15 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=42.4
Q ss_pred cEEEEEecCCCCeEEEEcCC------------CcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcce
Q 016257 156 SVLDMDFSLDSEFLATTSTD------------GSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (392)
Q Consensus 156 ~i~~i~~~~~~~~l~~~~~d------------~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (392)
..-.|+|+|.|++++.-..+ ..+.+.+..+++..+.+..+....++.++|+||++.+|
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 35678999999866654322 23556666777777777777778899999999998743
No 368
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=73.22 E-value=69 Score=30.93 Aligned_cols=162 Identities=10% Similarity=0.068 Sum_probs=74.9
Q ss_pred CCceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeCCCCCeeEEEEcCCC-CeEEEE
Q 016257 3 GGGTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDESEGDPMTIAVNPSG-DDFVCS 81 (392)
Q Consensus 3 ~~~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~-~~l~~~ 81 (392)
.++.|.+++++|.+....++. ...++ +|.-+..+............-.-....+.+++++|.. +.++.+
T Consensus 13 ~~g~i~~i~~~p~~~~~~~a~--~~~gg--------v~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 13 GGGYITGIVAHPKTKDLLYAR--TDIGG--------AYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp BCSCEEEEEECSSSTTCEEEE--ESSSC--------EEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEECCCCCCEEEEE--ecCCC--------EEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 357899999999766533333 22121 6666555443321100000000012469999999843 344444
Q ss_pred eCCCe----EEEEEEeCCccceeeccccCCC---CCCCCCeEEEEecCC-CCEEEEEeCCCcEEEEeCCCCc---eeecc
Q 016257 82 TTNGG----CKLFEVYGGATDINLLAKKMPP---LQDAGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLR---IILDE 150 (392)
Q Consensus 82 ~~d~~----i~iw~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~---~~~~~ 150 (392)
..+.. -.||....+....+........ ......+..+++.|. .+.++.+...+.|.. ..+.++ .+...
T Consensus 83 ~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~ 161 (789)
T 1sqj_A 83 QGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSI 161 (789)
T ss_dssp ECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTS
T ss_pred eCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccC
Confidence 33211 3455544443333222111110 011113556788773 456666654443322 222222 22111
Q ss_pred c---CCCCcEEEEEecCC-CCeEEEEcCC
Q 016257 151 P---KAHKSVLDMDFSLD-SEFLATTSTD 175 (392)
Q Consensus 151 ~---~~~~~i~~i~~~~~-~~~l~~~~~d 175 (392)
. .....+..+.++|. +..++.+..+
T Consensus 162 ~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 162 PDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred ccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1 11235888999884 4456666544
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=70.95 E-value=50 Score=28.40 Aligned_cols=242 Identities=10% Similarity=0.008 Sum_probs=120.3
Q ss_pred cCCCCeEEEEeCCCeEEEEEEeCCccceee-ccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeC---C-----
Q 016257 72 NPSGDDFVCSTTNGGCKLFEVYGGATDINL-LAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW---P----- 142 (392)
Q Consensus 72 sp~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~---~----- 142 (392)
-|+...+++.+.+|.|+--.+........- .......+.....+..+........|+..+..|.++-+.. .
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 467778999999999887655332111000 0000001123456666666555667777778887766543 2
Q ss_pred -CCceeeccc--CCCCcEEEEEecC---CCCeEEEEcCCCcEEEEECCCCee-----eEEEecCCCcceEEEEecCCCCc
Q 016257 143 -SLRIILDEP--KAHKSVLDMDFSL---DSEFLATTSTDGSARIWKTEDGVA-----WTFLTRNSDEKIELCRFSKDGTK 211 (392)
Q Consensus 143 -~~~~~~~~~--~~~~~i~~i~~~~---~~~~l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~ 211 (392)
.|..+..+. .....|.++..-. ++.+|+.++..|.++...+..-.. +..+.......+-.+........
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~ 163 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRD 163 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCE
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCce
Confidence 122222221 2223555554332 456899999999999888643211 11111111223444444333333
Q ss_pred ceEEEEEEeCCccEEEEEeCCCceee-------eeecc-cCCCcEEEEECC-----------------------------
Q 016257 212 PFLFCTVQRGDKALLAVYDISTWNKI-------GHKRL-LRKPASVLSISL----------------------------- 254 (392)
Q Consensus 212 ~~~~~~~~~~~d~~i~v~d~~~~~~~-------~~~~~-~~~~v~~~~~s~----------------------------- 254 (392)
++..+..|.+..++...-... .-+.. ....|.++...+
T Consensus 164 -----i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 238 (370)
T 3l6v_A 164 -----VLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVI 238 (370)
T ss_dssp -----EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC---------------------------
T ss_pred -----EEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccc
Confidence 455556677766765432111 11111 123444444333
Q ss_pred ------CCCEEEEEeCCCcEEEEecCCceee-------eeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 255 ------DGKYLAMGSKDGDICVVDVKKMEIN-------HWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 255 ------~~~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
++..+++.+..|..+...+...... ..+......+.+-.+.+..+...++..+..|.+.-..+.
T Consensus 239 ~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 239 DVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp --------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred ccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 4568888999999888877543221 111111112345554444444455556666665544443
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=68.46 E-value=47 Score=27.13 Aligned_cols=197 Identities=10% Similarity=0.063 Sum_probs=104.1
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEE---EEeCCccceeeccccCCCCCCCCCeEEEEecC-CCCEEEEEeCCCcEEEE
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLF---EVYGGATDINLLAKKMPPLQDAGPQKCLSFSV-DGSRFAAGGVDGHLRIM 139 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~ 139 (392)
+.+..+.-....++|+.-+..|.++-- ++...... .. +.....|..+.... +..+++..+.+|.++-.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~------~l--l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~ 95 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKV------SL--KSREEKIVGAFIREKFGNRLLLATKKGYVKKI 95 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEEC------CC--SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCccc------cc--CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEE
Confidence 455555554455566666778866543 33222111 01 33455676664421 46789999999999998
Q ss_pred eCCCCc------eeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCC-------eeeEEEecCCCcceEEEEec
Q 016257 140 HWPSLR------IILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-------VAWTFLTRNSDEKIELCRFS 206 (392)
Q Consensus 140 d~~~~~------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~~~v~~~~~~ 206 (392)
.+.... ....+. ..+.+..+........++..+..|.+..+....- +-..-+....++.+..+...
T Consensus 96 ~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~ 174 (276)
T 3no0_A 96 PLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIW 174 (276)
T ss_dssp EGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEE
T ss_pred EHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEe
Confidence 875432 111122 2345555555555667888888899888875321 11111111223345555444
Q ss_pred CCCCcceEEEEEEeCCccEEEEEeCCCcee-------eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEE--EecCC
Q 016257 207 KDGTKPFLFCTVQRGDKALLAVYDISTWNK-------IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICV--VDVKK 275 (392)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i--wd~~~ 275 (392)
+++.. ++..+..|.++...+..... +..+ .....+..+....+...++..+.+|.+.. ++...
T Consensus 175 ~~~~~-----ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 175 NGEPY-----LLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp SSCSE-----EEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred CCCCE-----EEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 44443 45556677777766543211 1112 12233444333333345666667777776 76644
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.92 E-value=19 Score=36.62 Aligned_cols=36 Identities=8% Similarity=0.080 Sum_probs=29.5
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeec
Q 016257 114 PQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD 149 (392)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 149 (392)
.+.+++..++..++++-+.|+++|+|++.+++++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 445556667888999999999999999999987654
No 372
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=67.69 E-value=60 Score=28.01 Aligned_cols=233 Identities=8% Similarity=-0.011 Sum_probs=114.7
Q ss_pred CeEEEEeCCCeEEEEEEeCCccc------eeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeCCCCc----
Q 016257 76 DDFVCSTTNGGCKLFEVYGGATD------INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLR---- 145 (392)
Q Consensus 76 ~~l~~~~~d~~i~iw~~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---- 145 (392)
...+.-..||.|+.|-....... ..........+ ....+..++.+.-....+.-..||.|+.|-.....
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~-~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGG-TTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccc-cCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 34455567888888865332110 00000001101 12345556776666666777889999999543211
Q ss_pred -------eeecccCC-CCcEEEEEecCCCCeEEEEcCCCcEEEEECCCC-----------eeeEEEecCCCcceEEEEec
Q 016257 146 -------IILDEPKA-HKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-----------VAWTFLTRNSDEKIELCRFS 206 (392)
Q Consensus 146 -------~~~~~~~~-~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~-----------~~~~~~~~~~~~~v~~~~~~ 206 (392)
....+... ...|..++.. ....+....||.|+.|-.... .....+.......+..++..
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 11111111 1245555554 334455567899999975321 01111111122245555544
Q ss_pred CCCCcceEEEEEEeCCccEEEEEeCCCcee-----------eeeecc-cCCCcEEEEECCCCCEEEEEeCCCcEEEEecC
Q 016257 207 KDGTKPFLFCTVQRGDKALLAVYDISTWNK-----------IGHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (392)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~-----------~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 274 (392)
....+ .+.-..++.|+.|-...... ...+.. ....|..++.. ..+.+.-..||.|+.|-..
T Consensus 220 ~g~~~-----t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 220 SGDAQ-----TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp CSSCE-----EEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECC
T ss_pred CCCcE-----EEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCC
Confidence 32232 34445688899996543111 111111 12245555543 3355555678999999543
Q ss_pred Cc-----------eeeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEeecCc
Q 016257 275 KM-----------EINHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLTVPA 321 (392)
Q Consensus 275 ~~-----------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 321 (392)
.. ..+..+.... ...|..++. -..+.++-..||.|..|-.+...
T Consensus 293 ~~GqLG~g~~~~~~~P~~v~~l~-~~~v~~ia~--G~~h~~al~~~G~v~~wG~n~~G 347 (389)
T 3kci_A 293 DYHRLGHGSDDHVRRPRQVQGLQ-GKKVIAIAT--GSLHCVCCTEDGEVYTWGDNDEG 347 (389)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGT-TCCEEEEEE--CSSEEEEEETTCCEEEEECCTTS
T ss_pred CCCCCCCCCCccccCCeEeccCC-CCCEEEEEe--ccCeEEEECCCCCEEEeeCCCCC
Confidence 21 1111111111 335666654 33456666889999999876543
No 373
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=66.95 E-value=33 Score=31.54 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=40.4
Q ss_pred cEEEEEecCCCCeEEEEcC------------CCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcce
Q 016257 156 SVLDMDFSLDSEFLATTST------------DGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPF 213 (392)
Q Consensus 156 ~i~~i~~~~~~~~l~~~~~------------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 213 (392)
....|.|+++|.+.+.... ...+..++..+++....+..+....++.++|+||++.+|
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEE
Confidence 4678999999987774321 125666677677765555544455789999999998744
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=66.05 E-value=59 Score=27.36 Aligned_cols=237 Identities=9% Similarity=0.013 Sum_probs=120.8
Q ss_pred CeEEEEeCCCeEEEEEEeCCccceee-ccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEe---CCC------Cc
Q 016257 76 DDFVCSTTNGGCKLFEVYGGATDINL-LAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMH---WPS------LR 145 (392)
Q Consensus 76 ~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d---~~~------~~ 145 (392)
..+++.+.+|.|+--.+.+.+....- .......+.....+..+........|+.-+..|.++-.. +.. |.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 35667788887775554321110000 000001112234555555555556676667788766544 332 22
Q ss_pred eeecccC--CCCcEEEEEecC---CCCeEEEEcCCCcEEEEECCCCee-----eEEEecCCCcceEEEEecCCCCcceEE
Q 016257 146 IILDEPK--AHKSVLDMDFSL---DSEFLATTSTDGSARIWKTEDGVA-----WTFLTRNSDEKIELCRFSKDGTKPFLF 215 (392)
Q Consensus 146 ~~~~~~~--~~~~i~~i~~~~---~~~~l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~ 215 (392)
.+..+.. ....|..+..-+ +..+++..+.+|.++--.+..-.. +..+....+..+..+........
T Consensus 84 ~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~---- 159 (327)
T 3uc1_A 84 HVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDD---- 159 (327)
T ss_dssp EHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCE----
T ss_pred EHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCE----
Confidence 2212211 223555554333 567899999999999888654221 11111112234444444444444
Q ss_pred EEEEeCCccEEEEEeCC--Cce---------eeeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceee-----
Q 016257 216 CTVQRGDKALLAVYDIS--TWN---------KIGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEIN----- 279 (392)
Q Consensus 216 ~~~~~~~d~~i~v~d~~--~~~---------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~----- 279 (392)
++..+..|.+..+... .-. ....+. ....|.++...+++.+++..+..|.++.-.+......
T Consensus 160 -ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~ 237 (327)
T 3uc1_A 160 -LLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGK 237 (327)
T ss_dssp -EEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred -EEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCC
Confidence 4555566777766655 211 111111 2345767766666778999999999988876543221
Q ss_pred --eeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 280 --HWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 280 --~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
..+........+-.+....+...++..+.+|.+.-+...
T Consensus 238 G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 238 GVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 111100002344444444444566667777777666654
No 375
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.49 E-value=50 Score=31.31 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=26.9
Q ss_pred CeEEEEecCCCCEEEEEeCCCcEEEEeCCCCceeec
Q 016257 114 PQKCLSFSVDGSRFAAGGVDGHLRIMHWPSLRIILD 149 (392)
Q Consensus 114 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 149 (392)
.|.++.+ +..++++-+.|.++|+|++++++++..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 3555554 467999999999999999999887644
No 376
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=60.68 E-value=75 Score=26.69 Aligned_cols=236 Identities=9% Similarity=0.006 Sum_probs=121.5
Q ss_pred CCCCeEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeC---C------C
Q 016257 73 PSGDDFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW---P------S 143 (392)
Q Consensus 73 p~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~---~------~ 143 (392)
|+...+++.+.+|.|+--.+...+.. ......+.....+..+........|+..+..|.++-+.. . .
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~----~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~ 78 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAAS----NGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDL 78 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHT----TTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhc----CccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCC
Confidence 45667888899998886655422110 000111223455666655556667777788888766544 2 1
Q ss_pred Cceeeccc--CCCCcEEEEE-ecC--CCCeEEEEcCCCcEEEEECCCC------eeeEEEecCCCcceEEEEecCCCCcc
Q 016257 144 LRIILDEP--KAHKSVLDMD-FSL--DSEFLATTSTDGSARIWKTEDG------VAWTFLTRNSDEKIELCRFSKDGTKP 212 (392)
Q Consensus 144 ~~~~~~~~--~~~~~i~~i~-~~~--~~~~l~~~~~d~~i~vwd~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~ 212 (392)
|.++.... .....|..+. ..+ ++.+++.++.+|.++-..+..- +-+..+....+..+-.+........
T Consensus 79 G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~- 157 (323)
T 1wp5_A 79 GQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNE- 157 (323)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSE-
T ss_pred CcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCE-
Confidence 22222221 1223455543 332 2567889999999999887421 1111111112234444444433333
Q ss_pred eEEEEEEeCCccEEEEEeCCCcee-------eeeecc-cCCCcEEEEECCCCC-EEEEEeCCCcEEEEecCCcee-----
Q 016257 213 FLFCTVQRGDKALLAVYDISTWNK-------IGHKRL-LRKPASVLSISLDGK-YLAMGSKDGDICVVDVKKMEI----- 278 (392)
Q Consensus 213 ~~~~~~~~~~d~~i~v~d~~~~~~-------~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~----- 278 (392)
++..+.+|.+..++...-.. +.-+.. ....|.++..-+++. .+++.+..|..+..++.....
T Consensus 158 ----i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~ 233 (323)
T 1wp5_A 158 ----LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAK 233 (323)
T ss_dssp ----EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTS
T ss_pred ----EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCC
Confidence 45666677777776543211 111111 134455554444444 788888888888877754211
Q ss_pred --eeeee--ccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 279 --NHWSK--RLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 279 --~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
...+. ... ...+..+....++..++..+..|.+.-..+.
T Consensus 234 kGv~~~~~~~~~-~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 234 RGVVILRELKAN-PHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp CCEECSCCCSSS-CCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred CCEECeeecCCC-CceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 11111 111 2244433333334556666777776555554
No 377
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.09 E-value=1.3e+02 Score=28.60 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=29.5
Q ss_pred EEEEEecCCCCeEEEEcCCCcEEEEECCCCeeeEEEec
Q 016257 157 VLDMDFSLDSEFLATTSTDGSARIWKTEDGVAWTFLTR 194 (392)
Q Consensus 157 i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 194 (392)
|.++.+ +..++++-+.|.++|+|++++++++.+...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555444 367999999999999999999998887765
No 378
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=57.06 E-value=1.3e+02 Score=28.50 Aligned_cols=179 Identities=11% Similarity=0.005 Sum_probs=88.3
Q ss_pred CeEEEEEEeCCccceeeccccCCCCCCCCCeEEEEecCCCCE-----EEEEeCC---CcEEEEeCCC--CceeecccCCC
Q 016257 85 GGCKLFEVYGGATDINLLAKKMPPLQDAGPQKCLSFSVDGSR-----FAAGGVD---GHLRIMHWPS--LRIILDEPKAH 154 (392)
Q Consensus 85 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-----l~~~~~d---g~i~i~d~~~--~~~~~~~~~~~ 154 (392)
..|+.|.+-+........-... ....-.....++++++ +++.+.+ ..+++.+... ++.. .+....
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 290 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVP----KEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KINMPS 290 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECC----TTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECCSCT
T ss_pred CEEEEEECCCChHHCeEEeccC----CCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-EeecCC
Confidence 4577777765543322222111 1112234555666652 4443322 4466666543 3322 222222
Q ss_pred CcEEEEEecCCCCeEEEE----------cCCCcEEEEECCCCe-------eeEE-EecCCCcceEEEEecCCCCcceEEE
Q 016257 155 KSVLDMDFSLDSEFLATT----------STDGSARIWKTEDGV-------AWTF-LTRNSDEKIELCRFSKDGTKPFLFC 216 (392)
Q Consensus 155 ~~i~~i~~~~~~~~l~~~----------~~d~~i~vwd~~~~~-------~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~ 216 (392)
.. .+..+.++.+++.. ...+.|...++.+.. .... +.......+..+.+..+.- + +
T Consensus 291 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l--~--~ 364 (711)
T 4hvt_A 291 DA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRV--F--L 364 (711)
T ss_dssp TC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCE--E--E
T ss_pred cc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEE--E--E
Confidence 21 12334455555532 135779999987642 2233 3334445677888887631 1 1
Q ss_pred EEEeCCccEEEEEeCCCce-eeee-eccc-CCCcEEEEECCCCCE-EEEEeC---CCcEEEEecC
Q 016257 217 TVQRGDKALLAVYDISTWN-KIGH-KRLL-RKPASVLSISLDGKY-LAMGSK---DGDICVVDVK 274 (392)
Q Consensus 217 ~~~~~~d~~i~v~d~~~~~-~~~~-~~~~-~~~v~~~~~s~~~~~-l~~~~~---dg~i~iwd~~ 274 (392)
...-.....+.++|+.+++ .... +... ...+.....++++.. +++.+. -+.+..+|+.
T Consensus 365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 2333334568888876654 2222 2222 245666667777654 444332 3568888876
No 379
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=57.02 E-value=84 Score=26.11 Aligned_cols=239 Identities=9% Similarity=-0.006 Sum_probs=118.0
Q ss_pred CCCCeEEEEeCCCeEEEEEEeCCccceee-ccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEEEeC---CC-----
Q 016257 73 PSGDDFVCSTTNGGCKLFEVYGGATDINL-LAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRIMHW---PS----- 143 (392)
Q Consensus 73 p~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~---~~----- 143 (392)
|+...+++.+.+|.|+--.+..-+....- .......+.....+..+......+.|+..+..|.++-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 34557788889998876655432211100 0000001123345555555555567777778888666543 22
Q ss_pred -Cceeeccc--CCCCcEEEEEec---CCCCeEEEEcCCCcEEEEECCCC-------eeeEEEecCCCcceEEEEecCCCC
Q 016257 144 -LRIILDEP--KAHKSVLDMDFS---LDSEFLATTSTDGSARIWKTEDG-------VAWTFLTRNSDEKIELCRFSKDGT 210 (392)
Q Consensus 144 -~~~~~~~~--~~~~~i~~i~~~---~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~ 210 (392)
|..+.... .....|..+..- .++.+++..+.+|.++--.+..- .....+..+ ..+-.+.......
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~--d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG--DELIGVDLTSGED 158 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT--CCEEEEEEECTTC
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC--CEEEEEEEeCCCC
Confidence 22221121 222356555432 34567888999999998876421 111112222 3344444443333
Q ss_pred cceEEEEEEeCCccEEEEEeCCCceee-------eeecc-cCCCcEEEEECCCCCEEEEEeCCCcEEEEecCCceee---
Q 016257 211 KPFLFCTVQRGDKALLAVYDISTWNKI-------GHKRL-LRKPASVLSISLDGKYLAMGSKDGDICVVDVKKMEIN--- 279 (392)
Q Consensus 211 ~~~~~~~~~~~~d~~i~v~d~~~~~~~-------~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--- 279 (392)
. ++..+.+|.+..++...-... ..+.. ....|.++...+++..+++.+..|.++-.++......
T Consensus 159 ~-----i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg 233 (307)
T 1zi0_A 159 E-----VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRA 233 (307)
T ss_dssp E-----EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTT
T ss_pred E-----EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCC
Confidence 3 455566777777765432111 11111 2345666655555677888899999888877432211
Q ss_pred ----eeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEEEEee
Q 016257 280 ----HWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMITKLT 318 (392)
Q Consensus 280 ----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 318 (392)
..+......+.+-.+....+...++..+.+|.+.-..+.
T Consensus 234 ~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 234 TKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp SCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGG
T ss_pred CCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecc
Confidence 111101102455544443444556666667766555554
No 380
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=56.07 E-value=1.4e+02 Score=28.44 Aligned_cols=117 Identities=11% Similarity=0.062 Sum_probs=57.6
Q ss_pred ceeeeecCCCCCcceeEEEeCCCCCCCCCcCceeEEEEcCCCCccccCCceEEEeeC-CCCCeeEEEEcC-CCCeEEEEe
Q 016257 5 GTVTCGSWIKRPENVNLVVLGKSSRASSSPSVLEIFSFDPKTTSVYTSPLVTYVFDE-SEGDPMTIAVNP-SGDDFVCST 82 (392)
Q Consensus 5 ~~v~~~~w~~~~~~~~~~~~g~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp-~~~~l~~~~ 82 (392)
+.|..++++|.+....++.+ ..++ +|..+..+......... ..... ....|.+++++| +.+.++.+.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~--~~gg--------v~rS~D~G~tW~~i~~~-~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARA--AIGG--------AYRWDPSTETWIPLLDH-FQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp SCCCEEEECSSSTTCEEEEC--SSSC--------EEEEETTTTEEEECCTT-CCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred ceeeEEEECCCCCCEEEEEe--cCCc--------EEEeCCCCCCEEECcCc-cCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 48999999998765333332 2222 77776555443210000 00000 123589999998 334444443
Q ss_pred CC-------CeEEEEEEeCCccceeeccccCCC---CCCCCCeEEEEecC-CCCEEEEEeC
Q 016257 83 TN-------GGCKLFEVYGGATDINLLAKKMPP---LQDAGPQKCLSFSV-DGSRFAAGGV 132 (392)
Q Consensus 83 ~d-------~~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~-~~~~l~~~~~ 132 (392)
.. +...||....+....+........ ......+..+++.| +...++.+..
T Consensus 92 ~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 92 GMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 21 125667665554333332211110 00112346788988 4456666653
No 381
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=49.48 E-value=1.2e+02 Score=28.46 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=41.2
Q ss_pred cEEEEEC----CCCC--EEEEEeCCCcEE-EEecCCce-------eeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeE
Q 016257 247 ASVLSIS----LDGK--YLAMGSKDGDIC-VVDVKKME-------INHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGA 312 (392)
Q Consensus 247 v~~~~~s----~~~~--~l~~~~~dg~i~-iwd~~~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 312 (392)
.+.++.+ ++|+ .++.|+.+|.|. +.-..... .+..+.......+|..|.++++.++|+.++.++.+
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~ 493 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 493 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEE
Confidence 4555552 4453 477889999875 33222211 11112112226789999999999999999998655
Q ss_pred EE
Q 016257 313 MI 314 (392)
Q Consensus 313 ~i 314 (392)
+|
T Consensus 494 kV 495 (667)
T 4gz8_A 494 QL 495 (667)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 382
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=45.30 E-value=96 Score=27.94 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=42.3
Q ss_pred CcEEEEECC----CCC--EEEEEeCCCcEEEEecC-Cce-------eeeeeeccccCcceEEEEEeeCCCeEEEEeCCCe
Q 016257 246 PASVLSISL----DGK--YLAMGSKDGDICVVDVK-KME-------INHWSKRLHLGTSIALVEFCPTQRVVLTASKEWG 311 (392)
Q Consensus 246 ~v~~~~~s~----~~~--~l~~~~~dg~i~iwd~~-~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 311 (392)
..++++... ++. .++.|+.+|.|.-.-+. .+. .+..+.......+|..|.+++++.+|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 356666643 243 47788999987544332 221 1112211111578999999999999999998865
Q ss_pred EEE
Q 016257 312 AMI 314 (392)
Q Consensus 312 i~i 314 (392)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 383
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=44.61 E-value=1.3e+02 Score=24.85 Aligned_cols=205 Identities=9% Similarity=0.082 Sum_probs=102.7
Q ss_pred CeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCcccee-eccc---cCCCCCCCCCeEEEEec---CCCCEEEEEeCCCcEE
Q 016257 65 DPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDIN-LLAK---KMPPLQDAGPQKCLSFS---VDGSRFAAGGVDGHLR 137 (392)
Q Consensus 65 ~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~---~~~~~~~~~~v~~~~~s---~~~~~l~~~~~dg~i~ 137 (392)
.+..+......+.|+..+..|.++-+....-..... -... ..-.+.....|.++..- .++.+++..+.+|.++
T Consensus 43 ~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~K 122 (307)
T 1zi0_A 43 FIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVK 122 (307)
T ss_dssp CEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEE
T ss_pred EEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEE
Confidence 344444444455666667888766555422111000 0000 11123344556665432 3456788889999999
Q ss_pred EEeCCC-------CceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCCe-------eeEEEecCCCcceEEE
Q 016257 138 IMHWPS-------LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDGV-------AWTFLTRNSDEKIELC 203 (392)
Q Consensus 138 i~d~~~-------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~~-------~~~~~~~~~~~~v~~~ 203 (392)
--.+.. +.....+... +.+-.+........++..+.+|.+..+....-. -..-+....++.|-++
T Consensus 123 rt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~ 201 (307)
T 1zi0_A 123 KTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSL 201 (307)
T ss_dssp EEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEE
T ss_pred EEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEE
Confidence 887642 1122222223 455555554445567777788888888764211 1111222233456666
Q ss_pred EecCCCCcceEEEEEEeCCccEEEEEeCCCcee---------eeeecccCCCcEEEEECCCCCEEEEEeCCCcEEEEecC
Q 016257 204 RFSKDGTKPFLFCTVQRGDKALLAVYDISTWNK---------IGHKRLLRKPASVLSISLDGKYLAMGSKDGDICVVDVK 274 (392)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~---------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 274 (392)
...+++.. ++..+..|..+-.++..... ...+......+-.+....+...++..+.+|.+.-++..
T Consensus 202 ~~~~~~~~-----ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 202 IVPRGDGA-----ILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp ECCCSSCE-----EEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGG
T ss_pred EEecCCCE-----EEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecc
Confidence 54444443 45556777777776632111 11111122344443333334455566667776666655
Q ss_pred C
Q 016257 275 K 275 (392)
Q Consensus 275 ~ 275 (392)
.
T Consensus 277 ~ 277 (307)
T 1zi0_A 277 E 277 (307)
T ss_dssp G
T ss_pred c
Confidence 4
No 384
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=44.27 E-value=1.4e+02 Score=24.86 Aligned_cols=168 Identities=12% Similarity=0.085 Sum_probs=89.0
Q ss_pred eeCCCCCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccce-eecc---ccCCCCCCCCCeEEEEecC---CCCEEEEEe
Q 016257 59 FDESEGDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATDI-NLLA---KKMPPLQDAGPQKCLSFSV---DGSRFAAGG 131 (392)
Q Consensus 59 ~~~h~~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~---~~~~~~~~~~~v~~~~~s~---~~~~l~~~~ 131 (392)
++.. +.+..+......+.++..+..|.++-+....-.... .-.. ...-.+.....|.++...+ +..+|+..+
T Consensus 43 lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T 121 (312)
T 1suu_A 43 LNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTT 121 (312)
T ss_dssp CCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEE
T ss_pred cCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEe
Confidence 4443 344444444455677777888877666553211100 0000 0011123344555554332 456788889
Q ss_pred CCCcEEEEeCCC-------CceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCC-------eeeEEEecCCC
Q 016257 132 VDGHLRIMHWPS-------LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-------VAWTFLTRNSD 197 (392)
Q Consensus 132 ~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~ 197 (392)
..|.++...+.. +.....+.. .+.+-.+........++..+.+|.+..+....- +-+..+....+
T Consensus 122 ~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~ 200 (312)
T 1suu_A 122 ASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEG 200 (312)
T ss_dssp TTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTT
T ss_pred CCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCC
Confidence 999998887632 222222222 345555555554567888888899988887531 11222222223
Q ss_pred cceEEEEecCCCCcceEEEEEEeCCccEEEEEeCCC
Q 016257 198 EKIELCRFSKDGTKPFLFCTVQRGDKALLAVYDIST 233 (392)
Q Consensus 198 ~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~ 233 (392)
..+-.+..-.++.. ++..+..|..+..++..
T Consensus 201 d~vv~~~~v~~~~~-----l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 201 DLFVKVLSVKENPY-----LLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CCEEEEEECTTCSE-----EEEEETTSEEEEEEGGG
T ss_pred CEEEEEEEECCCCe-----EEEEECCCceEEEEHHH
Confidence 34555544444443 45566777788777653
No 385
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=42.16 E-value=1.5e+02 Score=24.77 Aligned_cols=205 Identities=9% Similarity=0.036 Sum_probs=101.0
Q ss_pred CCeeEEEEcCCCCeEEEEeCCCeEEEEEEeCCccc-----eeeccccCCCCCCCCCeEEEE-ecC--CCCEEEEEeCCCc
Q 016257 64 GDPMTIAVNPSGDDFVCSTTNGGCKLFEVYGGATD-----INLLAKKMPPLQDAGPQKCLS-FSV--DGSRFAAGGVDGH 135 (392)
Q Consensus 64 ~~v~~~~~sp~~~~l~~~~~d~~i~iw~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~-~s~--~~~~l~~~~~dg~ 135 (392)
+.+..+......+.|+..+..|.++-+....-... ..... ..-.+.....|.++. ... ++.+++.++.+|.
T Consensus 39 D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~-~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 117 (323)
T 1wp5_A 39 DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIA-NIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM 117 (323)
T ss_dssp CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGG-GTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChh-hccCCCCCCEEEEEEEecccCCCceEEEEeCCCe
Confidence 34444444445556777778887665554221110 00011 111233344566543 332 2567888999999
Q ss_pred EEEEeCCC--------CceeecccCCCCcEEEEEecCCCCeEEEEcCCCcEEEEECCCC-------eeeEEEecCCCcce
Q 016257 136 LRIMHWPS--------LRIILDEPKAHKSVLDMDFSLDSEFLATTSTDGSARIWKTEDG-------VAWTFLTRNSDEKI 200 (392)
Q Consensus 136 i~i~d~~~--------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~~~v 200 (392)
++-..+.. +.....+... +.+-.+........++..+.+|.+..+....- +-+.-+....++.|
T Consensus 118 iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~V 196 (323)
T 1wp5_A 118 VKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYI 196 (323)
T ss_dssp EEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCE
T ss_pred EEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEE
Confidence 99887742 1112222222 45555555445556777888898888876431 11222222233345
Q ss_pred EEEEecCCCC-cceEEEEEEeCCccEEEEEeCCCce-------eeeee---cccCCCcEEEEECCCCCEEEEEeCCCcEE
Q 016257 201 ELCRFSKDGT-KPFLFCTVQRGDKALLAVYDISTWN-------KIGHK---RLLRKPASVLSISLDGKYLAMGSKDGDIC 269 (392)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~d~~i~v~d~~~~~-------~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 269 (392)
-++...+++. . ++..+..|..+..++.... -+..+ +.....+..+....++..++..+.+|.+.
T Consensus 197 v~~~~~~~~~~~-----ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~i 271 (323)
T 1wp5_A 197 VSGQLITSKDES-----IVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIE 271 (323)
T ss_dssp EEEEEECCTTCE-----EEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEE
T ss_pred EEEEEEcCCCcE-----EEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEE
Confidence 5554433333 3 4555566666666654311 11111 11122344332223344555666677766
Q ss_pred EEecCC
Q 016257 270 VVDVKK 275 (392)
Q Consensus 270 iwd~~~ 275 (392)
..++..
T Consensus 272 r~~~~~ 277 (323)
T 1wp5_A 272 TIKVGD 277 (323)
T ss_dssp EEEGGG
T ss_pred EEEhhh
Confidence 666544
No 386
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=37.06 E-value=88 Score=28.19 Aligned_cols=74 Identities=15% Similarity=0.171 Sum_probs=41.6
Q ss_pred CeeEEEEcC----CCC--eEEEEeCCCeEEEEEEeCCccc---eeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCc
Q 016257 65 DPMTIAVNP----SGD--DFVCSTTNGGCKLFEVYGGATD---INLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGH 135 (392)
Q Consensus 65 ~v~~~~~sp----~~~--~l~~~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 135 (392)
..++|+... +++ .+..|..+|.|+-.-+...... ......+........+|..+.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 356666543 243 4667888887654433221100 1111111222234578999999999999999988775
Q ss_pred EEE
Q 016257 136 LRI 138 (392)
Q Consensus 136 i~i 138 (392)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 387
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=35.67 E-value=82 Score=28.77 Aligned_cols=68 Identities=12% Similarity=0.096 Sum_probs=40.7
Q ss_pred cEEEEECCCC--CEEEEEeCCCcEEEEecCCc----eeeeeeeccccCcceE-EEEEeeCCCeEEEEeCCCeEEE
Q 016257 247 ASVLSISLDG--KYLAMGSKDGDICVVDVKKM----EINHWSKRLHLGTSIA-LVEFCPTQRVVLTASKEWGAMI 314 (392)
Q Consensus 247 v~~~~~s~~~--~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~dg~i~i 314 (392)
.++++....+ ..++.|+.+|.|.-..+... .....+.......+|. .|.+++++.+|+.++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4555554433 34777889998766555422 1222221111145785 8999999999999988844433
No 388
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=35.19 E-value=1e+02 Score=20.86 Aligned_cols=10 Identities=20% Similarity=0.428 Sum_probs=5.8
Q ss_pred EEEEecCCCC
Q 016257 201 ELCRFSKDGT 210 (392)
Q Consensus 201 ~~~~~~~~~~ 210 (392)
..+.+..+|.
T Consensus 59 ~~l~l~~dGN 68 (113)
T 3mez_B 59 CFMRLGHSGE 68 (113)
T ss_dssp CEEEECTTSC
T ss_pred EEEEEeCCCc
Confidence 3456666666
No 389
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=32.29 E-value=1.5e+02 Score=27.04 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=43.2
Q ss_pred CeeEEEEcCCCC--eEEEEeCCCeEEEEEEeCCccceeeccccCCCCCCCCCeE-EEEecCCCCEEEEEeCCCcEEE
Q 016257 65 DPMTIAVNPSGD--DFVCSTTNGGCKLFEVYGGATDINLLAKKMPPLQDAGPQK-CLSFSVDGSRFAAGGVDGHLRI 138 (392)
Q Consensus 65 ~v~~~~~sp~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~i 138 (392)
..++++....+. .+..|..+|.|+-..+.......... ..........+|. .+.+++++.+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~-e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQY-EMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEE-EEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeE-EEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 466666655443 56678899988766665432110111 1111122345775 8999999999999887654444
No 390
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=31.30 E-value=1.5e+02 Score=27.81 Aligned_cols=62 Identities=13% Similarity=0.178 Sum_probs=37.4
Q ss_pred eEEEEeCCCeEE-EEEEeCCc--cceeeccccCCCCCCCCCeEEEEecCCCCEEEEEeCCCcEEE
Q 016257 77 DFVCSTTNGGCK-LFEVYGGA--TDINLLAKKMPPLQDAGPQKCLSFSVDGSRFAAGGVDGHLRI 138 (392)
Q Consensus 77 ~l~~~~~d~~i~-iw~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 138 (392)
.+..|..+|.|+ +....... ........+...+....+|..+.++++..+|++++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466788899875 33222211 111111122233345678999999999999999998775555
No 391
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=28.03 E-value=3.6e+02 Score=24.82 Aligned_cols=163 Identities=12% Similarity=0.109 Sum_probs=83.5
Q ss_pred CCCCeEEEEecCCCC-EEEEEeCCCc----------------------------EEEEeCCCCceeecccCC--CCc---
Q 016257 111 DAGPQKCLSFSVDGS-RFAAGGVDGH----------------------------LRIMHWPSLRIILDEPKA--HKS--- 156 (392)
Q Consensus 111 ~~~~v~~~~~s~~~~-~l~~~~~dg~----------------------------i~i~d~~~~~~~~~~~~~--~~~--- 156 (392)
|...+....|.-||+ -++....+|+ +.++|=.+++.+....-. ...
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg~~~~ 256 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVSD 256 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCCGGG
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCCcccc
Confidence 455677788888875 4666655554 778887777765443211 111
Q ss_pred ------------EEEEEec-CCCCeEEEEc---CCCcEEEEECCCCeeeEEEecCCC------------cceEEEEecCC
Q 016257 157 ------------VLDMDFS-LDSEFLATTS---TDGSARIWKTEDGVAWTFLTRNSD------------EKIELCRFSKD 208 (392)
Q Consensus 157 ------------i~~i~~~-~~~~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~~------------~~v~~~~~~~~ 208 (392)
..++++- -+...++.+- .-..+..||.+.++....+..... ..+....+.-|
T Consensus 257 WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgD 336 (591)
T 2zux_A 257 WGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGD 336 (591)
T ss_dssp GTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSS
T ss_pred cccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCC
Confidence 1233321 1222233332 123488899887766554432111 23445556666
Q ss_pred CCcceEEEEEEeCCccEEEEEeCCCceeeeeecccCCCcEEEEECCC--CCEEEEEeCCC----cEEEEecCCceeeeee
Q 016257 209 GTKPFLFCTVQRGDKALLAVYDISTWNKIGHKRLLRKPASVLSISLD--GKYLAMGSKDG----DICVVDVKKMEINHWS 282 (392)
Q Consensus 209 ~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg----~i~iwd~~~~~~~~~~ 282 (392)
|+...++-..+-..||++ +|... ..|...+....|.|+ |..++.+.+++ -..+.|..+++.+...
T Consensus 337 G~dEIv~Gs~~iD~dG~~-L~st~--------~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 337 GKDEIIFGSMAVDHDGKG-MYSTG--------LGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGV 407 (591)
T ss_dssp SSCEEEETTEEECTTSCE-EEECS--------CCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred CCceEEEeeeEECCCCCE-eeeCC--------CCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEc
Confidence 665422111111233332 33332 256666666677776 34555555441 2456777787776544
No 392
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=24.68 E-value=4.1e+02 Score=24.42 Aligned_cols=90 Identities=11% Similarity=-0.077 Sum_probs=46.8
Q ss_pred EEEEEecCCCC-eEEEEcCCCcEEEEECCCCeeeEEEecCCCcceEEEEecCCCCcceEEEEEEeCCc----cEEEEEeC
Q 016257 157 VLDMDFSLDSE-FLATTSTDGSARIWKTEDGVAWTFLTRNSDEKIELCRFSKDGTKPFLFCTVQRGDK----ALLAVYDI 231 (392)
Q Consensus 157 i~~i~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d----~~i~v~d~ 231 (392)
+.-..+.-||+ .|+.++. ++| .+++.+......|...+..-.|.|+..-+- ++.+.++ .-..+.|.
T Consensus 328 ~~vaDVDgDG~dEIv~Gs~-----~iD-~dG~~L~st~~gHGDa~hv~dldP~r~GlE---v~~~~E~~~~~~G~~~~dA 398 (591)
T 2zux_A 328 LSIADVDGDGKDEIIFGSM-----AVD-HDGKGMYSTGLGHGDALHTGDLDPGRPGLE---VFQVHEDKNAKYGLSFRDA 398 (591)
T ss_dssp CEEECCSSSSSCEEEETTE-----EEC-TTSCEEEECSCCCCSCEEEECCCTTSSSCE---EEEECCCTTSSCSEEEEET
T ss_pred CeeEeCCCCCCceEEEeee-----EEC-CCCCEeeeCCCCCCCeeEEeecCCCCCCcE---EEEEecCCCCCCccEEEEC
Confidence 34445555664 3444431 222 234444444345566778888888864322 2333332 13456899
Q ss_pred CCceeeeeeccc--CCCcEEEEECCC
Q 016257 232 STWNKIGHKRLL--RKPASVLSISLD 255 (392)
Q Consensus 232 ~~~~~~~~~~~~--~~~v~~~~~s~~ 255 (392)
++++.+-..... .+......|.|+
T Consensus 399 ~tG~vlw~~~~~~d~Gr~~~~Didp~ 424 (591)
T 2zux_A 399 ATGKILWGVYAGKDVGRGMAADIDPR 424 (591)
T ss_dssp TTCCEEEEECCSSCCCCEEEECCCTT
T ss_pred CCCcEEEEcCCCCCCCceeEEecCCC
Confidence 999887555432 233344455565
No 393
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=23.00 E-value=2.6e+02 Score=25.87 Aligned_cols=57 Identities=12% Similarity=0.034 Sum_probs=35.5
Q ss_pred EEEEEeCCCcEEEEec-CCc----e-eeeeeeccccCcceEEEEEeeCCCeEEEEeCCCeEEE
Q 016257 258 YLAMGSKDGDICVVDV-KKM----E-INHWSKRLHLGTSIALVEFCPTQRVVLTASKEWGAMI 314 (392)
Q Consensus 258 ~l~~~~~dg~i~iwd~-~~~----~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 314 (392)
.++.|+.+|.|.-.-. ..+ . .+..+.......+|..+.++++...|+.++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 5677888998764333 222 1 1111111111568999999999999999988855544
No 394
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=21.47 E-value=5.5e+02 Score=24.66 Aligned_cols=149 Identities=7% Similarity=-0.039 Sum_probs=73.3
Q ss_pred CCCeEEEEecCC-CCEEEEEeCCCcEEEEeCCCCceeecccCC-------CCcEEEEEecCCC-CeEEEEcCCCc----E
Q 016257 112 AGPQKCLSFSVD-GSRFAAGGVDGHLRIMHWPSLRIILDEPKA-------HKSVLDMDFSLDS-EFLATTSTDGS----A 178 (392)
Q Consensus 112 ~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~i~~i~~~~~~-~~l~~~~~d~~----i 178 (392)
.+.|.+++++|. ...++++...+.|...+ ..++.-..+... ...+.+|+++|.. +.++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999994 45677777777665554 233322222221 2369999999843 44444432211 3
Q ss_pred EEEEC-CCCeeeEEEecCC--------CcceEEEEecCCCCcceEEEEEEeCCccEEEE-EeC-CCceeeeeec---ccC
Q 016257 179 RIWKT-EDGVAWTFLTRNS--------DEKIELCRFSKDGTKPFLFCTVQRGDKALLAV-YDI-STWNKIGHKR---LLR 244 (392)
Q Consensus 179 ~vwd~-~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~~~d~~i~v-~d~-~~~~~~~~~~---~~~ 244 (392)
.||.. ..++.-..+.... ...+..++++|..... +..+...+.|.. -|- ++.+.+.... ...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~----v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNE----VWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEE----EEEECSSSCEEEESSTTSSCEEETTSCCCCSTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCE----EEEEeccCCEEEECCCCcccCCCccCccccCCC
Confidence 44433 3344433332210 1124568888764331 233332222221 111 1223322111 112
Q ss_pred CCcEEEEECCC-CCEEEEEeCC
Q 016257 245 KPASVLSISLD-GKYLAMGSKD 265 (392)
Q Consensus 245 ~~v~~~~~s~~-~~~l~~~~~d 265 (392)
..+..+.++|. +..++++..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 45788999884 4566666654
Done!