BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016258
(392 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118489075|gb|ABK96344.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 363
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 295/387 (76%), Positives = 319/387 (82%), Gaps = 30/387 (7%)
Query: 1 MTPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHD- 58
MTPVCPF KA RPDD SPRKPG ECP K AEH+
Sbjct: 1 MTPVCPFVKASRPDDGSPRKPG--------ECPI------------------KHGAEHEG 34
Query: 59 GDKAKSDS-MDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACI 117
G KAK +S +SA++ PKCPFGYD+Q+FK+GPLSCMICQALLF+CSKC PCSHVYCK CI
Sbjct: 35 GGKAKKESGGESATVSPKCPFGYDSQTFKLGPLSCMICQALLFDCSKCVPCSHVYCKVCI 94
Query: 118 SRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYED 177
SRFKDCPLCGAD+EKIEADT LQ VVDRFI+GHARIKRSH + DK E EAGENKKVIYED
Sbjct: 95 SRFKDCPLCGADVEKIEADTDLQSVVDRFIDGHARIKRSHVDMDK-EGEAGENKKVIYED 153
Query: 178 VSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGML 237
VS+ERGAFLVQQAMRAFRAQNVESAKSRLSLC EDIR +IE +GNTSELCSQLGAVLGML
Sbjct: 154 VSLERGAFLVQQAMRAFRAQNVESAKSRLSLCAEDIRGRIETVGNTSELCSQLGAVLGML 213
Query: 238 GDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARS 297
GDCCRA+GDA +AV YF +SVEFL KL DLEI HT SVSLNKIGDLKYY GDL+AARS
Sbjct: 214 GDCCRAVGDAGSAVTYFEESVEFLSKLAAADLEITHTHSVSLNKIGDLKYYDGDLEAARS 273
Query: 298 YYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
YY+RSLNVRRDA+K H +V SQ LDVAVSLAKVAD DRSIGNED A+D F EAIK LESL
Sbjct: 274 YYMRSLNVRRDAIKHHPSVSSQTLDVAVSLAKVADADRSIGNEDAALDRFHEAIKLLESL 333
Query: 358 TLKPEEAGLEQRRLSVLEFLNNQLSEK 384
TLKPEEAGLEQRRLSVLEFLNNQL+EK
Sbjct: 334 TLKPEEAGLEQRRLSVLEFLNNQLAEK 360
>gi|225465383|ref|XP_002276838.1| PREDICTED: uncharacterized protein LOC100262520 [Vitis vinifera]
Length = 369
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 280/385 (72%), Positives = 316/385 (82%), Gaps = 19/385 (4%)
Query: 1 MTPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDG 59
MTPVCPF KA RPDDA+ RKP E +K+ E K + D D
Sbjct: 1 MTPVCPFVKAARPDDATSRKPNECPHKHQLELE-GKGKKDSG----------------DS 43
Query: 60 DKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISR 119
K DS+D+ASI PKCPFGYD+Q+FK+GPLSCMICQALLFE SKC PCSHVYCKACISR
Sbjct: 44 ASTKKDSVDAASISPKCPFGYDSQTFKLGPLSCMICQALLFESSKCVPCSHVYCKACISR 103
Query: 120 FKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
FKDCPLCGADIEKIEAD LQ+ VDRFIEGH RIKR H N+D EE G++K VIYEDVS
Sbjct: 104 FKDCPLCGADIEKIEADMNLQNTVDRFIEGHGRIKRPHVNTDSEE-AVGDDKTVIYEDVS 162
Query: 180 MERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGD 239
+ERGAFLVQ AMRAFRA NVESAKSRLS+C EDIR Q+E++GNTSELCSQLGAVLGMLGD
Sbjct: 163 LERGAFLVQHAMRAFRANNVESAKSRLSICAEDIRGQLEKLGNTSELCSQLGAVLGMLGD 222
Query: 240 CCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYY 299
CCRA GDAD+AV YF +SV+FL KLP DDLEI HTLSVSLNKIGDLKYY GDL+AARSYY
Sbjct: 223 CCRATGDADSAVTYFEESVDFLRKLPADDLEITHTLSVSLNKIGDLKYYDGDLEAARSYY 282
Query: 300 VRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTL 359
+SL+VRR+A+K SNVPSQ+LDVAVSLAKVADV+R++GNEDVA++GF+EAIK LESLTL
Sbjct: 283 SQSLDVRRNAIKDRSNVPSQILDVAVSLAKVADVNRNVGNEDVAINGFEEAIKLLESLTL 342
Query: 360 KPEEAGLEQRRLSVLEFLNNQLSEK 384
EEAGLEQRRLSV+EFLN Q++EK
Sbjct: 343 SSEEAGLEQRRLSVMEFLNKQIAEK 367
>gi|296085428|emb|CBI29160.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 280/385 (72%), Positives = 316/385 (82%), Gaps = 19/385 (4%)
Query: 1 MTPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDG 59
MTPVCPF KA RPDDA+ RKP E +K+ E K + D D
Sbjct: 26 MTPVCPFVKAARPDDATSRKPNECPHKHQLELE-GKGKKDSG----------------DS 68
Query: 60 DKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISR 119
K DS+D+ASI PKCPFGYD+Q+FK+GPLSCMICQALLFE SKC PCSHVYCKACISR
Sbjct: 69 ASTKKDSVDAASISPKCPFGYDSQTFKLGPLSCMICQALLFESSKCVPCSHVYCKACISR 128
Query: 120 FKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
FKDCPLCGADIEKIEAD LQ+ VDRFIEGH RIKR H N+D EE G++K VIYEDVS
Sbjct: 129 FKDCPLCGADIEKIEADMNLQNTVDRFIEGHGRIKRPHVNTDSEE-AVGDDKTVIYEDVS 187
Query: 180 MERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGD 239
+ERGAFLVQ AMRAFRA NVESAKSRLS+C EDIR Q+E++GNTSELCSQLGAVLGMLGD
Sbjct: 188 LERGAFLVQHAMRAFRANNVESAKSRLSICAEDIRGQLEKLGNTSELCSQLGAVLGMLGD 247
Query: 240 CCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYY 299
CCRA GDAD+AV YF +SV+FL KLP DDLEI HTLSVSLNKIGDLKYY GDL+AARSYY
Sbjct: 248 CCRATGDADSAVTYFEESVDFLRKLPADDLEITHTLSVSLNKIGDLKYYDGDLEAARSYY 307
Query: 300 VRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTL 359
+SL+VRR+A+K SNVPSQ+LDVAVSLAKVADV+R++GNEDVA++GF+EAIK LESLTL
Sbjct: 308 SQSLDVRRNAIKDRSNVPSQILDVAVSLAKVADVNRNVGNEDVAINGFEEAIKLLESLTL 367
Query: 360 KPEEAGLEQRRLSVLEFLNNQLSEK 384
EEAGLEQRRLSV+EFLN Q++EK
Sbjct: 368 SSEEAGLEQRRLSVMEFLNKQIAEK 392
>gi|224053090|ref|XP_002297702.1| predicted protein [Populus trichocarpa]
gi|222844960|gb|EEE82507.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 287/387 (74%), Positives = 318/387 (82%), Gaps = 30/387 (7%)
Query: 1 MTPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHD- 58
MT VCP KA RPDD S RKPG ECP K AEH+
Sbjct: 1 MTTVCPLVKASRPDDGSSRKPG--------ECP------------------EKHAAEHEG 34
Query: 59 GDKAKSDSMD-SASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACI 117
G KAK +S+ SA++ PKCPFGYD+Q+FK+GP SCMICQALLF+CSKC PCSHVYCK CI
Sbjct: 35 GGKAKKESVGASATVSPKCPFGYDSQTFKLGPHSCMICQALLFDCSKCVPCSHVYCKVCI 94
Query: 118 SRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYED 177
SRFKDCPLCGADIE+IEADT LQ VVDRF++GHARIKRSH + DK E + GENKKVIYED
Sbjct: 95 SRFKDCPLCGADIERIEADTDLQSVVDRFVDGHARIKRSHVDMDK-EGKVGENKKVIYED 153
Query: 178 VSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGML 237
VS+ERGAFLVQQAMRAFRAQNVESA+SRLSLC EDIR QIE G+TSELCSQLGAVLGML
Sbjct: 154 VSLERGAFLVQQAMRAFRAQNVESARSRLSLCAEDIRGQIEIAGSTSELCSQLGAVLGML 213
Query: 238 GDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARS 297
GDCCR+MGDA +AV+YF +SVEFL KLP DLEI+HTLSVSLNKIGDLKYY GDL+AARS
Sbjct: 214 GDCCRSMGDAGSAVSYFEESVEFLSKLPAADLEIMHTLSVSLNKIGDLKYYDGDLEAARS 273
Query: 298 YYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
YY+RSLNVRRDA+K H +V SQ LDVAVSLAKVADVDR+IGNED A+D F++AIK LESL
Sbjct: 274 YYIRSLNVRRDAIKHHPSVSSQTLDVAVSLAKVADVDRTIGNEDAALDRFRDAIKLLESL 333
Query: 358 TLKPEEAGLEQRRLSVLEFLNNQLSEK 384
TLKPEEAGLEQRRLSVLEFLN QL+EK
Sbjct: 334 TLKPEEAGLEQRRLSVLEFLNTQLAEK 360
>gi|356508245|ref|XP_003522869.1| PREDICTED: uncharacterized protein LOC100813258 [Glycine max]
Length = 367
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/393 (71%), Positives = 316/393 (80%), Gaps = 29/393 (7%)
Query: 1 MTPVCPFAKARPDDASPRKPGENSNKYPAECPFSKARPDDA-ASRKAVENSAKPQAEHDG 59
MTPVCPF KA ARPDD AS+K+ ENS K QAE +
Sbjct: 3 MTPVCPFVKA-------------------------ARPDDNNASKKSGENSMKHQAESES 37
Query: 60 DKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISR 119
K K + DSAS PKCPFGYD+QSFKIGPLSC +CQALLF+ SKC PCSHV+CKACISR
Sbjct: 38 -KVKKEVNDSASTSPKCPFGYDSQSFKIGPLSCTVCQALLFDTSKCVPCSHVFCKACISR 96
Query: 120 FKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
FKDCPLCGADI KIE D LQ VVDRFIEGHARIKRS ++DK E EA E+K+VIYEDVS
Sbjct: 97 FKDCPLCGADIVKIEPDANLQGVVDRFIEGHARIKRS-VSADKGE-EAAESKQVIYEDVS 154
Query: 180 MERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGD 239
+ERG+FLVQQAMRAFRAQN+ESAKSRL+ C EDIRDQ+E++GNTSELCSQLGAVLGMLGD
Sbjct: 155 LERGSFLVQQAMRAFRAQNLESAKSRLNFCAEDIRDQLEKVGNTSELCSQLGAVLGMLGD 214
Query: 240 CCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYY 299
CCRAMGDA +AVAYF +SV+FL KLP DDLEI HTLSVSLNKIGDLKYY GDLQAARSYY
Sbjct: 215 CCRAMGDASSAVAYFEESVQFLSKLPKDDLEITHTLSVSLNKIGDLKYYDGDLQAARSYY 274
Query: 300 VRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTL 359
+SLNVRRDAVK +SNVPSQVLDVAVSLAKVADVDR++G+E +A DGFQEAI LESLTL
Sbjct: 275 FKSLNVRRDAVKHNSNVPSQVLDVAVSLAKVADVDRNLGDEKLATDGFQEAIDLLESLTL 334
Query: 360 KPEEAGLEQRRLSVLEFLNNQLSEKPPESTPKV 392
K E +GLEQRR SV++FL +QL +K ++ V
Sbjct: 335 KSEASGLEQRRQSVIDFLRSQLPDKQEQAEATV 367
>gi|224075908|ref|XP_002304823.1| predicted protein [Populus trichocarpa]
gi|222842255|gb|EEE79802.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/372 (75%), Positives = 304/372 (81%), Gaps = 30/372 (8%)
Query: 1 MTPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHD- 58
MTPVCPF KA RPDD SPRKPG ECP K AEH+
Sbjct: 1 MTPVCPFVKASRPDDGSPRKPG--------ECPI------------------KHGAEHEG 34
Query: 59 GDKAKSDS-MDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACI 117
G KAK +S +SA++ PKCPFGYD+Q+FK+GPLSCMICQALLF+CSKC PCSHVYCK CI
Sbjct: 35 GGKAKKESGGESATVSPKCPFGYDSQTFKLGPLSCMICQALLFDCSKCVPCSHVYCKVCI 94
Query: 118 SRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYED 177
SRFKDCPLCGAD+EKIEADT LQ VVDRFI+GHARIKRSH + DK E EAGENKKVIYED
Sbjct: 95 SRFKDCPLCGADVEKIEADTDLQSVVDRFIDGHARIKRSHVDMDK-EGEAGENKKVIYED 153
Query: 178 VSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGML 237
VS+ERGAFLVQQAMRAFRAQNVESAKSRLSLC EDIR +IE +GNTSELCSQLGAVLGML
Sbjct: 154 VSLERGAFLVQQAMRAFRAQNVESAKSRLSLCAEDIRGRIETVGNTSELCSQLGAVLGML 213
Query: 238 GDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARS 297
GDCCRA+GDA +AV YF +SVEFL KL DLEI HT SVSLNKIGDLKYY GDL+AARS
Sbjct: 214 GDCCRAVGDAGSAVTYFEESVEFLSKLAAADLEITHTHSVSLNKIGDLKYYDGDLEAARS 273
Query: 298 YYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
YY+RSLNVRRDA+K H +V SQ LDVAVSLAKVAD DRSIGNED A+D F EAIK LESL
Sbjct: 274 YYMRSLNVRRDAIKHHPSVSSQTLDVAVSLAKVADADRSIGNEDAALDRFHEAIKLLESL 333
Query: 358 TLKPEEAGLEQR 369
TLKPEEAGLEQR
Sbjct: 334 TLKPEEAGLEQR 345
>gi|255569221|ref|XP_002525579.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223535158|gb|EEF36838.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 392
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/389 (70%), Positives = 311/389 (79%), Gaps = 8/389 (2%)
Query: 1 MTPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDG 59
MTPVCPF KA RPDD+ +K EN +K+ E KA+ + +V NS P+
Sbjct: 1 MTPVCPFVKASRPDDSPAKKTSENQSKHGQELEL-KAKKESCGGGDSV-NSNSPKCPFGY 58
Query: 60 DKAKSDSMDS----ASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKA 115
D +D+ S A+IP KCP GYD++SFKIGPLSC+ICQALLF+ +KC PC+H++CKA
Sbjct: 59 DSVNADANASPKSAATIPAKCPLGYDSRSFKIGPLSCIICQALLFDTTKCVPCNHIFCKA 118
Query: 116 CISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIY 175
C+S F+DCPLCGADIEK EA+ LQ VDRFIEGHARIKRSH N EE+E GEN KVIY
Sbjct: 119 CVSPFRDCPLCGADIEKFEAEMNLQATVDRFIEGHARIKRSHINK-HEEEEVGENTKVIY 177
Query: 176 EDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLG 235
EDVS+ERGAFLVQ AMRAFRA+N ESAKSRLSLC EDIR QIE GNT ELCSQLGAVLG
Sbjct: 178 EDVSLERGAFLVQHAMRAFRAKNFESAKSRLSLCAEDIRGQIEAAGNTPELCSQLGAVLG 237
Query: 236 MLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAA 295
MLGDCCRAMGDA +AVAYF +SVEFL K P DD E++HTLSVSLNKIGDLKYY GDL+AA
Sbjct: 238 MLGDCCRAMGDAGSAVAYFEESVEFLSKFPTDDQEVMHTLSVSLNKIGDLKYYDGDLEAA 297
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
+SYY RSLNVRRDA++ H +V SQ LDVAVSLAKVAD DRS+GNED AV FQEAIK LE
Sbjct: 298 KSYYSRSLNVRRDAIEHHPHVSSQSLDVAVSLAKVADADRSLGNEDAAVSRFQEAIKLLE 357
Query: 356 SLTLKPEEAGLEQRRLSVLEFLNNQLSEK 384
SLTLKPEEA L+QRRLSVLEFLNNQL+EK
Sbjct: 358 SLTLKPEEAALDQRRLSVLEFLNNQLAEK 386
>gi|297820180|ref|XP_002877973.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323811|gb|EFH54232.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 415
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/385 (69%), Positives = 314/385 (81%), Gaps = 7/385 (1%)
Query: 5 CPFAKA-RPDDASPRKPGENSNKYPAECPFSKA-RPDDAASRKAVENSAKPQAEHDGDKA 62
CPF+KA RPDDAS RK GE + + CPFSKA RPDDA++RK E ++ EH+G K
Sbjct: 30 CPFSKAARPDDASARKQGEIT---ASGCPFSKAARPDDASARKQDEIASNGCPEHEG-KL 85
Query: 63 KSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD 122
DS DSA++P KCPFGYD+Q+FK+GP SCM+CQALL+E S+C PC+HV+CK C+SRF D
Sbjct: 86 NKDSTDSATVPAKCPFGYDSQTFKLGPFSCMLCQALLYESSRCVPCTHVFCKVCVSRFND 145
Query: 123 CPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMER 182
CPLCGADIE IE D LQ +VD+FIEGHARIKRS N ++E+ +NKKVIY DVSMER
Sbjct: 146 CPLCGADIESIEVDENLQKMVDQFIEGHARIKRSVVNGTEKEEIENDNKKVIYADVSMER 205
Query: 183 GAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCR 242
G+FLVQQAMRAF AQN ESAKSRL++CTEDIRDQ+ R GNT ELCSQLGAVLGMLGDC R
Sbjct: 206 GSFLVQQAMRAFSAQNYESAKSRLAMCTEDIRDQLGREGNTPELCSQLGAVLGMLGDCSR 265
Query: 243 AMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRS 302
AMGD+ +AV +F +SVEFLMKLP++DLEI HTLSVSLNKIGDLKYY DLQAARSYY R+
Sbjct: 266 AMGDSSSAVKHFEESVEFLMKLPLNDLEITHTLSVSLNKIGDLKYYDEDLQAARSYYDRA 325
Query: 303 LNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKPE 362
LNVRRDA+K H N PSQ+LDVAVSLAKVAD+DR++ NE A DGF+E +K LESL L E
Sbjct: 326 LNVRRDAMKHHPNAPSQILDVAVSLAKVADIDRTLQNEVAATDGFKEGMKLLESLKLDSE 385
Query: 363 EAGLEQRRLSVLEFLNNQLSEKPPE 387
++ LEQRRLSVLEFL Q+ EKP +
Sbjct: 386 DSALEQRRLSVLEFLKKQV-EKPEQ 409
>gi|356517714|ref|XP_003527531.1| PREDICTED: uncharacterized protein LOC100813844 [Glycine max]
Length = 367
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/393 (70%), Positives = 311/393 (79%), Gaps = 29/393 (7%)
Query: 1 MTPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDG 59
MTPVCPF KA RPDD + AS+K+ ENS K Q E +
Sbjct: 3 MTPVCPFVKASRPDD-------------------------NNASKKSGENSMKHQVESES 37
Query: 60 DKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISR 119
K K + DSAS PKCPFGYD+ SFKIGPLSC +CQALLF+ SKC PCSHV+CKACI R
Sbjct: 38 -KGKKEVNDSASTSPKCPFGYDSHSFKIGPLSCTVCQALLFDTSKCVPCSHVFCKACILR 96
Query: 120 FKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
FKDCPLCGADI KIE D LQ VVD FIEGHARIKRS +SDK E EA E+KKVIYEDVS
Sbjct: 97 FKDCPLCGADIVKIEPDANLQGVVDHFIEGHARIKRS-VSSDKGE-EATESKKVIYEDVS 154
Query: 180 MERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGD 239
+ERG+FLVQQAMRAFRAQN+ESAKSRL+LC EDIRDQ+E++GNTSELCSQLGAVLGMLGD
Sbjct: 155 LERGSFLVQQAMRAFRAQNLESAKSRLNLCAEDIRDQLEKVGNTSELCSQLGAVLGMLGD 214
Query: 240 CCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYY 299
CCRAMGDA +AVAYF +SV+FL KLP DDLEI HTLSVSLNKIGDLKYY DLQAARSYY
Sbjct: 215 CCRAMGDASSAVAYFEESVQFLSKLPKDDLEITHTLSVSLNKIGDLKYYDEDLQAARSYY 274
Query: 300 VRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTL 359
+SLNVRRD VK +SNVPSQVLDVAVSLAKVADVDR++G+E +A DGFQEAI LESLTL
Sbjct: 275 FKSLNVRRDVVKHNSNVPSQVLDVAVSLAKVADVDRNLGDEKLATDGFQEAIDLLESLTL 334
Query: 360 KPEEAGLEQRRLSVLEFLNNQLSEKPPESTPKV 392
K E +GLEQRR SVL+FL +QL +K ++ V
Sbjct: 335 KSEASGLEQRRQSVLDFLRSQLPDKQEQAEAPV 367
>gi|449458710|ref|XP_004147090.1| PREDICTED: uncharacterized protein LOC101210945 [Cucumis sativus]
gi|449503311|ref|XP_004161939.1| PREDICTED: uncharacterized LOC101210945 [Cucumis sativus]
Length = 404
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/403 (66%), Positives = 315/403 (78%), Gaps = 25/403 (6%)
Query: 1 MTPVCPFAK-ARPDDASPRK-PGENSNKYPAECPFSKA-RPDDAASRKAVENSAKP---- 53
MTPVCPF K ARPDDAS RK GE++ CPF+K+ R DDA+SRK SA P
Sbjct: 1 MTPVCPFVKSARPDDASSRKHQGESA------CPFAKSGRSDDASSRKPQSESACPVSKS 54
Query: 54 ------------QAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFE 101
QAE + + A+ D D+A KCPFGYD+Q+FKIGPLSCMICQALLFE
Sbjct: 55 VRSDDASSLKKNQAEAESNGAEKDVADAAGAGGKCPFGYDSQTFKIGPLSCMICQALLFE 114
Query: 102 CSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSD 161
CS+C PC+H++CKACISRF DCPLCGADIEKIEAD LQ VDRFIEGHARIKR NSD
Sbjct: 115 CSRCVPCTHIFCKACISRFNDCPLCGADIEKIEADDNLQATVDRFIEGHARIKRPQVNSD 174
Query: 162 KEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMG 221
KE+++ E+K VIYEDVSMERGAFL+QQAMRAFRAQN+ESAKSRL++C EDIRDQ+E+MG
Sbjct: 175 KEQEKVNESKVVIYEDVSMERGAFLIQQAMRAFRAQNIESAKSRLTVCVEDIRDQLEKMG 234
Query: 222 NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNK 281
++ ELCSQLGAVLG LGDCCRA GDA +A+ +F +SVEFL KLP EI HTLSVSLNK
Sbjct: 235 SSPELCSQLGAVLGTLGDCCRAAGDAASAIKHFEESVEFLSKLPEKTHEITHTLSVSLNK 294
Query: 282 IGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNED 341
IGDLKYY GDL+AARSYY+RSLNVR+DA K H + P+Q+LDVAVSLAKVADVD +GNED
Sbjct: 295 IGDLKYYEGDLEAARSYYLRSLNVRQDASKHHPDDPAQILDVAVSLAKVADVDSGLGNED 354
Query: 342 VAVDGFQEAIKRLESLTLKPEEAGLEQRRLSVLEFLNNQLSEK 384
+AVD FQE IK LESL+L E L+ RR SV++FL QL+E+
Sbjct: 355 MAVDRFQEGIKLLESLSLNSENPALQHRRESVMKFLEGQLAER 397
>gi|15232495|ref|NP_191004.1| zinc ion binding protein [Arabidopsis thaliana]
gi|15294164|gb|AAK95259.1|AF410273_1 AT3g54360/T12E18_50 [Arabidopsis thaliana]
gi|7288014|emb|CAB81801.1| RING finger-like protein [Arabidopsis thaliana]
gi|21554194|gb|AAM63273.1| RING finger-like protein [Arabidopsis thaliana]
gi|23308435|gb|AAN18187.1| At3g54360/T12E18_50 [Arabidopsis thaliana]
gi|332645699|gb|AEE79220.1| zinc ion binding protein [Arabidopsis thaliana]
Length = 405
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/398 (66%), Positives = 313/398 (78%), Gaps = 22/398 (5%)
Query: 2 TPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKA-RPDDAASRKAVE----------- 48
T VCPF+KA RPDD S RK GE + + CPFSKA RPDDA++RK E
Sbjct: 4 TSVCPFSKAARPDDGSTRKQGEIT---ASGCPFSKAARPDDASARKQGETTASGCPFSKS 60
Query: 49 -----NSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECS 103
N +K E +G+ K DS DSA++P KCPFGYD+Q+FK+GP SCM+CQALL+E S
Sbjct: 61 ARPDENGSKGCPEQEGNLNK-DSTDSATVPAKCPFGYDSQTFKLGPFSCMLCQALLYESS 119
Query: 104 KCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKE 163
+C PC+HV+CK C++RFKDCPLCGADIE IE D LQ +VD+FIEGHARIKRS N ++
Sbjct: 120 RCVPCTHVFCKVCLTRFKDCPLCGADIESIEVDENLQKMVDQFIEGHARIKRSVVNGTEK 179
Query: 164 EDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNT 223
E+ +NKKVIY DVSMERG+FLVQQAMRAF AQN ESAKSRL++CTEDIRDQ+ R GNT
Sbjct: 180 EEVENDNKKVIYADVSMERGSFLVQQAMRAFSAQNYESAKSRLAMCTEDIRDQLGREGNT 239
Query: 224 SELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIG 283
ELCSQLGAVLGMLGDC RAMGD+ +AV +F +SVEFLMKLP++DLEI HTLSVSLNKIG
Sbjct: 240 PELCSQLGAVLGMLGDCSRAMGDSSSAVKHFEESVEFLMKLPLNDLEITHTLSVSLNKIG 299
Query: 284 DLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVA 343
DLKYY DLQAARSYY R+LNVRRDA+K H N PSQ+LDVAVSLAKVAD+DR++ NE A
Sbjct: 300 DLKYYDEDLQAARSYYDRALNVRRDAMKHHPNAPSQILDVAVSLAKVADIDRTLQNEVAA 359
Query: 344 VDGFQEAIKRLESLTLKPEEAGLEQRRLSVLEFLNNQL 381
DGF+E ++ LESL L E++ LEQRRLSVLEFL Q+
Sbjct: 360 TDGFKEGMRLLESLKLDSEDSALEQRRLSVLEFLKKQV 397
>gi|357123566|ref|XP_003563481.1| PREDICTED: uncharacterized protein LOC100836228 [Brachypodium
distachyon]
Length = 379
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/388 (61%), Positives = 292/388 (75%), Gaps = 13/388 (3%)
Query: 1 MTPVCPFAKARPDDAS--PRKPGENSNKYPAECPFSKARPDDAASRKAV--ENSAKPQAE 56
M+ +CPFAKA P K +NS+ K+ +D++S V +N+ + E
Sbjct: 1 MSSLCPFAKATTGGGGVCPMKSDKNSSTV-------KSNKNDSSSVCPVTGKNNGEEHKE 53
Query: 57 HDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKAC 116
D A +S D +P KCPFGYD+ +FK+GPLSCM+CQALL + SKC PCSH +CK C
Sbjct: 54 SGTDHAGEESPDPRMVPAKCPFGYDSNTFKLGPLSCMVCQALLHDTSKCKPCSHKFCKTC 113
Query: 117 ISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYE 176
ISRFKDCPLCGADIE +E D LQ +VDRFI+GHARIKRS EE + KVIYE
Sbjct: 114 ISRFKDCPLCGADIEGVEPDPELQALVDRFIDGHARIKRSLAGGGVEEVDG--KSKVIYE 171
Query: 177 DVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGM 236
DVSMERGAFLVQQAMRAFRAQN+ESAKSRLS+C EDIR++++ + +LCSQLGAVLGM
Sbjct: 172 DVSMERGAFLVQQAMRAFRAQNIESAKSRLSMCAEDIREELKSAEDNLDLCSQLGAVLGM 231
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LGDCCR +GDA +A+ Y+ +S EFL KLP DLE++HTLSVSLNK+GDL+YYGGDLQ+AR
Sbjct: 232 LGDCCRTLGDASSAITYYEESAEFLSKLPTKDLELVHTLSVSLNKVGDLRYYGGDLQSAR 291
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLES 356
SYY RSL+VR+ AVK H +V SQV+D+A SLAKVADVDR++GN+D AV+GF+EAIK LE
Sbjct: 292 SYYARSLSVRQKAVKEHPSVASQVIDLATSLAKVADVDRNLGNQDAAVEGFEEAIKSLEK 351
Query: 357 LTLKPEEAGLEQRRLSVLEFLNNQLSEK 384
L L E+AGLEQRR SVL+FL+ QL K
Sbjct: 352 LNLDSEQAGLEQRRRSVLDFLHKQLDSK 379
>gi|357115327|ref|XP_003559441.1| PREDICTED: uncharacterized protein LOC100832811 [Brachypodium
distachyon]
Length = 380
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/389 (61%), Positives = 294/389 (75%), Gaps = 15/389 (3%)
Query: 1 MTPVCPFAKARPDDAS--PRKPGENSNKYPAECPFSKARPDDAASRKAV--ENSAKPQAE 56
M+ +CPFAKA P K +NS K+ +D++S V +N+ + E
Sbjct: 1 MSSLCPFAKATTGGGGVCPMKSNKNST--------VKSNKNDSSSVCPVTGKNNGEEHEE 52
Query: 57 HDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKAC 116
D A +S D +P KCPFGYD+ +FK+GPLSCM+CQALL + SKC PCSH +CKAC
Sbjct: 53 SGTDHAGEESPDPRVVPAKCPFGYDSNTFKLGPLSCMVCQALLHDTSKCKPCSHKFCKAC 112
Query: 117 ISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYE 176
ISRFKDCPLCGADIE +E D LQ + DRFI+GHARIKRS +EE + KVIYE
Sbjct: 113 ISRFKDCPLCGADIEGVEPDPELQALDDRFIDGHARIKRSLAGGGEEEVDG--KSKVIYE 170
Query: 177 DVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGM 236
DVSMERGAFLVQQAMRAFRAQN+ESAKSRLS+C EDIR++++ + +LCSQLGAVLGM
Sbjct: 171 DVSMERGAFLVQQAMRAFRAQNIESAKSRLSMCAEDIREELKSAEDNLDLCSQLGAVLGM 230
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LGDCCR +GDA +A+ Y+ +S EFL KLP DLE++HTLSVSLNK+GDL+YYGGDLQ+AR
Sbjct: 231 LGDCCRTLGDASSAITYYEESAEFLSKLPTKDLELVHTLSVSLNKVGDLRYYGGDLQSAR 290
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLES 356
SYY RSL+VR+ AVK HS+V SQV+D+A SLAKVADVDR++GN++ AV+GF+EAIK LE
Sbjct: 291 SYYARSLSVRQRAVKEHSSVASQVIDLATSLAKVADVDRNLGNQEAAVEGFEEAIKCLEK 350
Query: 357 LTLK-PEEAGLEQRRLSVLEFLNNQLSEK 384
L L+ E+AGLEQRR SVL+FL+ QL K
Sbjct: 351 LNLEDSEQAGLEQRRRSVLDFLHKQLDAK 379
>gi|218187346|gb|EEC69773.1| hypothetical protein OsI_00037 [Oryza sativa Indica Group]
Length = 409
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/361 (64%), Positives = 276/361 (76%), Gaps = 9/361 (2%)
Query: 31 CPFSKARPDDAASRKAVENSAKPQAEHD------GDKAKSDSMDSASIPPKCPFGYDAQS 84
CPF+K A + K H +K + + D +PPKCPFGYD+ +
Sbjct: 51 CPFAKLASAGATCPVKSSSDNKTTINHTDDDDDDNEKTGNANTDPRVVPPKCPFGYDSNT 110
Query: 85 FKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVD 144
FK+GPLSCM+C ALL + SKCTPCSH +CKACI RFKDCPLCGADI+ IE D LQ +VD
Sbjct: 111 FKLGPLSCMVCHALLHQSSKCTPCSHKFCKACILRFKDCPLCGADIQGIEPDDELQGLVD 170
Query: 145 RFIEGHARIKRSHTNSDKEEDEAGENK-KVIYEDVSMERGAFLVQQAMRAFRAQNVESAK 203
RFI+GHARIKRSH D E A +NK KVIYEDVSMERGAFLVQQAMRAFRAQN+ESAK
Sbjct: 171 RFIDGHARIKRSHAAGDGEA--ASDNKTKVIYEDVSMERGAFLVQQAMRAFRAQNIESAK 228
Query: 204 SRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
SRLS+C +DIR++++ + ELCSQLGAVLGMLGDCCR +GDA +A+ Y+ +S EFL K
Sbjct: 229 SRLSMCAQDIREELKSKQDNQELCSQLGAVLGMLGDCCRTLGDAPSAITYYEESAEFLSK 288
Query: 264 LPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDV 323
LP DLE++HTLSVSLNKIGDL+YY GDL +ARSYY RSL+VRR A K HS V SQV+DV
Sbjct: 289 LPKKDLELVHTLSVSLNKIGDLRYYDGDLHSARSYYARSLDVRRSAAKEHSAVASQVIDV 348
Query: 324 AVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSVLEFLNNQLSE 383
A SLAKVADVDR++GNE +AV+GF+EAIK LE+L L+ EA LEQRRLSVL+FL QL +
Sbjct: 349 ATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGEASLEQRRLSVLDFLQKQLDD 408
Query: 384 K 384
K
Sbjct: 409 K 409
>gi|297595892|ref|NP_001041762.2| Os01g0104100 [Oryza sativa Japonica Group]
gi|52075664|dbj|BAD44834.1| unknown protein [Oryza sativa Japonica Group]
gi|215737436|dbj|BAG96566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617574|gb|EEE53706.1| hypothetical protein OsJ_00033 [Oryza sativa Japonica Group]
gi|255672763|dbj|BAF03676.2| Os01g0104100 [Oryza sativa Japonica Group]
Length = 363
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/361 (64%), Positives = 276/361 (76%), Gaps = 9/361 (2%)
Query: 31 CPFSKARPDDAASRKAVENSAKPQAEHD------GDKAKSDSMDSASIPPKCPFGYDAQS 84
CPF+K A + K H +K + + D +PPKCPFGYD+ +
Sbjct: 5 CPFAKLASAGATCPVKSSSDNKTTINHTDDDDDDNEKTGNANTDPRVVPPKCPFGYDSNT 64
Query: 85 FKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVD 144
FK+GPLSCM+C ALL + SKCTPCSH +CKACI RFKDCPLCGADI+ IE D LQ +VD
Sbjct: 65 FKLGPLSCMVCHALLHQSSKCTPCSHKFCKACILRFKDCPLCGADIQGIEPDDELQGLVD 124
Query: 145 RFIEGHARIKRSHTNSDKEEDEAGENK-KVIYEDVSMERGAFLVQQAMRAFRAQNVESAK 203
RFI+GHARIKRSH D E A +NK KVIYEDVSMERGAFLVQQAMRAFRAQN+ESAK
Sbjct: 125 RFIDGHARIKRSHAAGDGEA--ASDNKTKVIYEDVSMERGAFLVQQAMRAFRAQNIESAK 182
Query: 204 SRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
SRLS+C +DIR++++ + ELCSQLGAVLGMLGDCCR +GDA +A+ Y+ +S EFL K
Sbjct: 183 SRLSMCAQDIREELKSKQDNQELCSQLGAVLGMLGDCCRTLGDAPSAITYYEESAEFLSK 242
Query: 264 LPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDV 323
LP DLE++HTLSVSLNKIGDL+YY GDL +ARSYY RSL+VRR A K HS V SQV+DV
Sbjct: 243 LPKKDLELVHTLSVSLNKIGDLRYYDGDLHSARSYYARSLDVRRSAAKEHSAVASQVIDV 302
Query: 324 AVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSVLEFLNNQLSE 383
A SLAKVADVDR++GNE +AV+GF+EAIK LE+L L+ EA LEQRRLSVL+FL QL +
Sbjct: 303 ATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGEASLEQRRLSVLDFLQKQLDD 362
Query: 384 K 384
K
Sbjct: 363 K 363
>gi|326494286|dbj|BAJ90412.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 376
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/384 (60%), Positives = 285/384 (74%), Gaps = 8/384 (2%)
Query: 1 MTPVCPFAKARPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGD 60
M+ +CPFAKA P K S+K P + + A P + + + A+
Sbjct: 1 MSSLCPFAKATTGGVCPMK----SDKKPDKSGGAAACPVTGKTHGGEDK--ETGADRAAA 54
Query: 61 KAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRF 120
+ D +P KCPFGYD+ +FK+GPLSCM+CQALL + SKC PC+H +CKACISRF
Sbjct: 55 GEEGAEGDPRLVPAKCPFGYDSNTFKLGPLSCMVCQALLHDASKCKPCAHKFCKACISRF 114
Query: 121 KDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSM 180
KDCPLCGADIE E D LQ +VDRFI+GHARIKRS D + A KVIYEDVSM
Sbjct: 115 KDCPLCGADIEGFEPDAELQALVDRFIDGHARIKRSLAGGDGQA--ADGKSKVIYEDVSM 172
Query: 181 ERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDC 240
ERGAFLVQQAMRAFRAQN+ESAKSRLS+C EDIR++++ + +LCSQLGAVLGMLGDC
Sbjct: 173 ERGAFLVQQAMRAFRAQNIESAKSRLSMCAEDIREELKSSEDNLDLCSQLGAVLGMLGDC 232
Query: 241 CRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYV 300
CR +GDA +A+ Y+ +S E L KLP DLE++HTLSVSLNK+GDL+YY GDLQ+ARSYY
Sbjct: 233 CRTLGDAPSAIKYYEESAELLSKLPKKDLELVHTLSVSLNKVGDLRYYDGDLQSARSYYA 292
Query: 301 RSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLK 360
RSL+VRR++VK HS V SQV+D+A SLAKVADVDR++GNED AV+GF+EAIK LE L L+
Sbjct: 293 RSLDVRRNSVKEHSAVASQVIDLATSLAKVADVDRNLGNEDAAVEGFEEAIKCLEKLKLE 352
Query: 361 PEEAGLEQRRLSVLEFLNNQLSEK 384
E+AGLEQRR SVL+FL QL EK
Sbjct: 353 SEQAGLEQRRRSVLDFLQKQLHEK 376
>gi|226504388|ref|NP_001140913.1| LOC100272990 [Zea mays]
gi|194701736|gb|ACF84952.1| unknown [Zea mays]
gi|414876735|tpg|DAA53866.1| TPA: putative RING zinc finger domain and TPR repeat-containing
protein domain protein isoform 1 [Zea mays]
gi|414876736|tpg|DAA53867.1| TPA: putative RING zinc finger domain and TPR repeat-containing
protein domain protein isoform 2 [Zea mays]
gi|414876737|tpg|DAA53868.1| TPA: putative RING zinc finger domain and TPR repeat-containing
protein domain protein isoform 3 [Zea mays]
Length = 379
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/386 (60%), Positives = 287/386 (74%), Gaps = 9/386 (2%)
Query: 1 MTPVCPFAKARPDDASPRKPGENSNKYPAECPFSKARPDDAASR--KAVENSAKPQAEHD 58
M+ +CPFA A + SN CP A+ D + S + +
Sbjct: 1 MSSICPFAGATTGGGVCPVKSDKSN--TGVCP---AKSDKSISGVCPVTGKDHGSKLKES 55
Query: 59 GDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACIS 118
GD + D +P KCPFGYD+ +FK+GPLSC++CQALL E SKC PC+H +CKACIS
Sbjct: 56 GDHGEEKGTDPRVVPAKCPFGYDSNTFKLGPLSCIVCQALLHESSKCKPCAHKFCKACIS 115
Query: 119 RFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDV 178
RFKDCPLCGADIE IE D LQ +VDRFI+GHARIKRSH D E + G+NK VIYEDV
Sbjct: 116 RFKDCPLCGADIEGIEPDAELQALVDRFIDGHARIKRSHAAGDVEAAD-GKNK-VIYEDV 173
Query: 179 SMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLG 238
SMERGAFLVQQAMRAFRA+N+ESAKSRL++C +DIR++++ + +LCSQLGAVLGMLG
Sbjct: 174 SMERGAFLVQQAMRAFRARNIESAKSRLTMCADDIREELKSSEDNLDLCSQLGAVLGMLG 233
Query: 239 DCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSY 298
DCCR +GD AA+ Y+ +S EFL K P DLE++HTLSVSLNKIGDL+YY GDLQ+AR+Y
Sbjct: 234 DCCRTLGDVPAAITYYEESAEFLSKPPAKDLELVHTLSVSLNKIGDLRYYDGDLQSARNY 293
Query: 299 YVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLT 358
Y RSL+VRR+AVK HS V SQV+D+A SLAKVADVDR++GNE AV+GF+EAI+ LE L
Sbjct: 294 YARSLDVRRNAVKEHSAVASQVIDLATSLAKVADVDRNLGNESTAVEGFEEAIRCLEKLK 353
Query: 359 LKPEEAGLEQRRLSVLEFLNNQLSEK 384
L E+ LEQRRLSVL+FL+NQL++K
Sbjct: 354 LDSEQTTLEQRRLSVLDFLHNQLADK 379
>gi|115449209|ref|NP_001048384.1| Os02g0795300 [Oryza sativa Japonica Group]
gi|47497224|dbj|BAD19269.1| unknown protein [Oryza sativa Japonica Group]
gi|113537915|dbj|BAF10298.1| Os02g0795300 [Oryza sativa Japonica Group]
gi|215678636|dbj|BAG92291.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697885|dbj|BAG92078.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623837|gb|EEE57969.1| hypothetical protein OsJ_08709 [Oryza sativa Japonica Group]
Length = 365
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/385 (61%), Positives = 285/385 (74%), Gaps = 21/385 (5%)
Query: 1 MTPVCPFAKARPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGD 60
M+ +CPFAK A+ P ++ NK + CP + D + D +
Sbjct: 1 MSSLCPFAKLASAGATC--PVKSDNKTTS-CPVTANNHTD---------------DDDNE 42
Query: 61 KAKSDSMDSASIPPKCPFGYDAQ-SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISR 119
K + + D +P KCPFGYD+ +FK+GPLSC++C ALL + SKCTPCSH +CKACI R
Sbjct: 43 KTGNANTDPRVVPAKCPFGYDSNNTFKLGPLSCVVCHALLHQSSKCTPCSHKFCKACILR 102
Query: 120 FKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
FKDCPLCGADI+ IE D LQ +VDRFI+GHARIKRSH D E A + KVIYE VS
Sbjct: 103 FKDCPLCGADIQGIEPDDELQGLVDRFIDGHARIKRSHAAGDGEA--ASDKTKVIYEHVS 160
Query: 180 MERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGD 239
MERGAFLVQQAMRAFRAQN+ESAKSRLS+C EDIR++++ + ELCSQLGAVLGMLGD
Sbjct: 161 MERGAFLVQQAMRAFRAQNIESAKSRLSMCAEDIREELKSKEDNQELCSQLGAVLGMLGD 220
Query: 240 CCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYY 299
CCR +GDA +A+ Y+ +S EFL KLP DLE++HTLSVSLNKIGDL YY GDL +ARSYY
Sbjct: 221 CCRTLGDAPSAITYYEESAEFLSKLPKKDLELVHTLSVSLNKIGDLCYYDGDLHSARSYY 280
Query: 300 VRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTL 359
RSL+VRR AVK HS V SQV+DVA SLAKVADVDR++GNE +AV+GF+EAIK LE+L L
Sbjct: 281 ARSLDVRRSAVKEHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKL 340
Query: 360 KPEEAGLEQRRLSVLEFLNNQLSEK 384
+ EA LEQRRLSVL+FL QL +K
Sbjct: 341 ESGEASLEQRRLSVLDFLQKQLDDK 365
>gi|326508820|dbj|BAJ86803.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 376
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/384 (60%), Positives = 284/384 (73%), Gaps = 8/384 (2%)
Query: 1 MTPVCPFAKARPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGD 60
M+ +CPFAKA P K S+K P + + A P + + + A+
Sbjct: 1 MSSLCPFAKATTGGVCPMK----SDKKPDKSGGAAACPVTGKTHGGEDK--ETGADRAAA 54
Query: 61 KAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRF 120
+ D +P KCPFGYD+ +FK+GPLSCM+CQALL + SKC PC+H +CKACISRF
Sbjct: 55 GEEGAEGDPRLVPAKCPFGYDSNTFKLGPLSCMVCQALLHDASKCKPCAHKFCKACISRF 114
Query: 121 KDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSM 180
KDCPLCGADIE E D LQ +VDRFI+GHARIKRS D + A KVIYEDVSM
Sbjct: 115 KDCPLCGADIEGFEPDAELQALVDRFIDGHARIKRSLAGGDGQA--ADGKSKVIYEDVSM 172
Query: 181 ERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDC 240
ERGAFLVQQAMRAFRAQN+ESAKSRLS+C EDIR++++ + +LCSQLGAVLGMLGDC
Sbjct: 173 ERGAFLVQQAMRAFRAQNIESAKSRLSMCAEDIREELKSSEDNLDLCSQLGAVLGMLGDC 232
Query: 241 CRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYV 300
R +GDA +A+ Y+ +S E L KLP DLE++HTLSVSLNK+GDL+YY GDLQ+ARSYY
Sbjct: 233 RRTLGDAPSAIKYYEESAELLSKLPKKDLELVHTLSVSLNKVGDLRYYDGDLQSARSYYA 292
Query: 301 RSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLK 360
RSL+VRR++VK HS V SQV+D+A SLAKVADVDR++GNED AV+GF+EAIK LE L L+
Sbjct: 293 RSLDVRRNSVKEHSAVASQVIDLATSLAKVADVDRNLGNEDAAVEGFEEAIKCLEKLKLE 352
Query: 361 PEEAGLEQRRLSVLEFLNNQLSEK 384
E+AGLEQRR SVL+FL QL EK
Sbjct: 353 SEQAGLEQRRRSVLDFLQKQLHEK 376
>gi|218191742|gb|EEC74169.1| hypothetical protein OsI_09273 [Oryza sativa Indica Group]
Length = 655
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/328 (68%), Positives = 265/328 (80%), Gaps = 3/328 (0%)
Query: 58 DGDKAKSDSMDSASIPPKCPFGYDAQ-SFKIGPLSCMICQALLFECSKCTPCSHVYCKAC 116
D +K + + D +P KCPFGYD+ +FK+GPLSC++C ALL + SKCTPCSH +CKAC
Sbjct: 330 DNEKTGNANTDPRVVPAKCPFGYDSNNTFKLGPLSCVVCHALLHQSSKCTPCSHKFCKAC 389
Query: 117 ISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYE 176
I RFKDCPLCGADI+ IE D LQ +VDRFI+GHARIKRSH D E A + KVIYE
Sbjct: 390 ILRFKDCPLCGADIQGIEPDDELQGLVDRFIDGHARIKRSHAAGDGEA--ASDKTKVIYE 447
Query: 177 DVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGM 236
DVSMERGAFLVQQAMRAFRAQN+ESAKSRLS+C EDIR++++ + ELCSQLGAVLGM
Sbjct: 448 DVSMERGAFLVQQAMRAFRAQNIESAKSRLSMCAEDIREELKSKEDNQELCSQLGAVLGM 507
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LGDCCR +GDA +A+ Y+ +S EFL KLP DLE++HTLSVSLNKIGDL YY GDL +AR
Sbjct: 508 LGDCCRTLGDAPSAITYYEESAEFLSKLPKKDLELVHTLSVSLNKIGDLCYYDGDLHSAR 567
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLES 356
SYY RSL+VRR AVK HS V SQV+DVA SLAKVADVDR++GNE +AV+GF+EAIK LE+
Sbjct: 568 SYYARSLDVRRSAVKEHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLEN 627
Query: 357 LTLKPEEAGLEQRRLSVLEFLNNQLSEK 384
L L+ EA LEQRRLSVL+FL QL +K
Sbjct: 628 LKLESGEASLEQRRLSVLDFLQKQLDDK 655
>gi|242080257|ref|XP_002444897.1| hypothetical protein SORBIDRAFT_07g001060 [Sorghum bicolor]
gi|241941247|gb|EES14392.1| hypothetical protein SORBIDRAFT_07g001060 [Sorghum bicolor]
Length = 382
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/389 (59%), Positives = 288/389 (74%), Gaps = 12/389 (3%)
Query: 1 MTPVCPFAKARPDDA-SPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEH-- 57
M+ CPFA A P K + S+ CP A+ D + + +EH
Sbjct: 1 MSSCCPFAGATTGGGVCPVKATDQSS--AGLCP--AAKSDKSITGVCPVTGKGHGSEHKE 56
Query: 58 --DGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKA 115
DG + K + D +P KCPFGYD+ +FK+GPLSC++CQALL E SKC PC+H +CKA
Sbjct: 57 SIDGGEEKG-TDDPRMVPAKCPFGYDSNTFKLGPLSCIVCQALLHESSKCKPCAHKFCKA 115
Query: 116 CISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIY 175
CISRFKDCPLCGADIE IE D LQ +VDRFI+GHARIKR H D E A KVIY
Sbjct: 116 CISRFKDCPLCGADIEGIEPDAELQALVDRFIDGHARIKRLHATGDVEA--ADFKDKVIY 173
Query: 176 EDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLG 235
EDVSMERGAFLVQQAMRAFRA+N+ESAKSRL++C +DIR++++ + +LCSQLGAVLG
Sbjct: 174 EDVSMERGAFLVQQAMRAFRAKNIESAKSRLTMCADDIREELKSSEDNLDLCSQLGAVLG 233
Query: 236 MLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAA 295
MLGDCCR +GD+ +A+ ++ +S E L KLP DLE++HTLSVSLNKIGDL+YY GDLQ+A
Sbjct: 234 MLGDCCRTLGDSPSAITHYEESAEILSKLPTKDLELVHTLSVSLNKIGDLRYYDGDLQSA 293
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
R+YY RSL+VRR+AVK HS V SQV+D+A SLAKVADVDR++GNE AV GF+EAI+ LE
Sbjct: 294 RNYYARSLDVRRNAVKEHSAVASQVIDLATSLAKVADVDRNLGNESTAVQGFEEAIQCLE 353
Query: 356 SLTLKPEEAGLEQRRLSVLEFLNNQLSEK 384
L L E+A LEQRRLSVL+FL+NQL++K
Sbjct: 354 KLKLDSEQASLEQRRLSVLDFLHNQLADK 382
>gi|343172988|gb|AEL99197.1| zinc ion binding protein, partial [Silene latifolia]
Length = 308
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/311 (68%), Positives = 255/311 (81%), Gaps = 4/311 (1%)
Query: 31 CPFSK-ARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGP 89
CPF K ARPDDA+S+++ EN +K EH+G KAK++++DS+ I KCP GYD++SFK+GP
Sbjct: 1 CPFVKVARPDDASSKRS-ENQSKHTGEHEG-KAKNETVDSSIIEAKCPLGYDSRSFKLGP 58
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
LSC+ICQALLFE SKC PCSHV+CK CI+RF DCPLCGADIEKIEAD LQ VVDRFI+G
Sbjct: 59 LSCVICQALLFESSKCVPCSHVFCKGCITRFNDCPLCGADIEKIEADNDLQKVVDRFIDG 118
Query: 150 HARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLC 209
HARIKRSH ++D E +NK VIYEDVS++RGAFLV AMRAFRA+N+ESAKSRLSLC
Sbjct: 119 HARIKRSHASTDAEA-AVSDNKPVIYEDVSLDRGAFLVHHAMRAFRARNIESAKSRLSLC 177
Query: 210 TEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDL 269
DIR+Q+E N ELCSQLGAVLG LGDCCRAMGD +A+ YF +SV+ L +LP D+
Sbjct: 178 VTDIREQLEASPNNPELCSQLGAVLGTLGDCCRAMGDGGSAITYFQESVDALSRLPTQDM 237
Query: 270 EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAK 329
EIIHTL VSLNKIGDLKYY GDLQA++SYY RSL R +A+K HS+ PS LDVAVSLAK
Sbjct: 238 EIIHTLCVSLNKIGDLKYYDGDLQASKSYYSRSLEYRHNAMKSHSDSPSLTLDVAVSLAK 297
Query: 330 VADVDRSIGNE 340
VADVD+ +G+E
Sbjct: 298 VADVDKGLGDE 308
>gi|343172990|gb|AEL99198.1| zinc ion binding protein, partial [Silene latifolia]
Length = 308
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/311 (69%), Positives = 254/311 (81%), Gaps = 4/311 (1%)
Query: 31 CPFSK-ARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGP 89
CPF K ARPDDA+S+++ EN +K EH+G KAK++++DS+ I KCP GYD++SFK+GP
Sbjct: 1 CPFVKVARPDDASSKRS-ENQSKHTGEHEG-KAKNETVDSSIIEAKCPLGYDSRSFKLGP 58
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
LSC+ICQALLFE SKC PCSHV+CKACI+ F DCPLCGADIEKIEAD LQ VVDRFI+G
Sbjct: 59 LSCVICQALLFESSKCVPCSHVFCKACITCFNDCPLCGADIEKIEADNDLQKVVDRFIDG 118
Query: 150 HARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLC 209
HARIKRSH ++D + NK VIYEDVS+ERGAFLV AMRAFRA+N+ESAKSRLSLC
Sbjct: 119 HARIKRSHGSTDADA-AVSNNKPVIYEDVSLERGAFLVHHAMRAFRARNIESAKSRLSLC 177
Query: 210 TEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDL 269
DIR+Q+E N ELCSQLGAVLG LGDCCRAMGD +A+ YF +SVE L +LP D+
Sbjct: 178 VTDIREQLEASPNNPELCSQLGAVLGTLGDCCRAMGDGGSAITYFQESVEALSRLPTQDM 237
Query: 270 EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAK 329
EIIHTL VSLNKIGDLKYY GDLQA++SYY RSL R +A+K HS+ PS LDVAVSLAK
Sbjct: 238 EIIHTLCVSLNKIGDLKYYDGDLQASKSYYSRSLEYRHNAMKSHSDSPSLTLDVAVSLAK 297
Query: 330 VADVDRSIGNE 340
VADVD+ +G+E
Sbjct: 298 VADVDKGLGDE 308
>gi|222424829|dbj|BAH20367.1| AT3G54360 [Arabidopsis thaliana]
Length = 292
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/284 (72%), Positives = 240/284 (84%)
Query: 98 LLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSH 157
LL+E S+C PC+HV+CK C++RFKDCPLCGADIE IE D LQ +VD+FIEGHARIKRS
Sbjct: 1 LLYESSRCVPCTHVFCKVCLTRFKDCPLCGADIESIEVDENLQKMVDQFIEGHARIKRSV 60
Query: 158 TNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQI 217
N ++E+ +NKKVIY DVSMERG+FLVQQAMRAF AQN ESAKSRL++CTEDIRDQ+
Sbjct: 61 VNGTEKEEVENDNKKVIYADVSMERGSFLVQQAMRAFSAQNYESAKSRLAMCTEDIRDQL 120
Query: 218 ERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSV 277
R GNT ELCSQLGAVLGMLGDC RAMGD+ +AV +F +SVEFLMKLP++DLEI HTLSV
Sbjct: 121 GREGNTPELCSQLGAVLGMLGDCSRAMGDSSSAVKHFEESVEFLMKLPLNDLEITHTLSV 180
Query: 278 SLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSI 337
SLNKIGDLKYY DLQAARSYY R+LNVRRDA+K H N PSQ+LDVAVSLAKVAD+DR++
Sbjct: 181 SLNKIGDLKYYDEDLQAARSYYDRALNVRRDAMKHHPNAPSQILDVAVSLAKVADIDRTL 240
Query: 338 GNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSVLEFLNNQL 381
NE A DGF+E ++ LESL L E++ LEQRRLSVLEFL Q+
Sbjct: 241 QNEVAATDGFKEGMRLLESLKLDSEDSALEQRRLSVLEFLKKQV 284
>gi|195607040|gb|ACG25350.1| hypothetical protein [Zea mays]
Length = 351
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/358 (59%), Positives = 261/358 (72%), Gaps = 9/358 (2%)
Query: 1 MTPVCPFAKARPDDASPRKPGENSNKYPAECPFSKARPDDAASR--KAVENSAKPQAEHD 58
M+ +CPFA A + SN CP A+ D + S + +
Sbjct: 1 MSSICPFAGATTGGGVCPVKSDKSNT--GVCP---AKSDKSISGVCPVTGKDHGSKLKES 55
Query: 59 GDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACIS 118
GD + D +P KCPFGYD+ +FK+GPLSC++CQALL E SKC PC+H +CKACIS
Sbjct: 56 GDHGEEKGTDPRVVPAKCPFGYDSNTFKLGPLSCIVCQALLHESSKCKPCAHKFCKACIS 115
Query: 119 RFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDV 178
RFKDCPLCGADIE IE D LQ +VDRFI+GHARIKRSH D E + G+NK VIYEDV
Sbjct: 116 RFKDCPLCGADIEGIEPDAELQALVDRFIDGHARIKRSHAAGDVEAAD-GKNK-VIYEDV 173
Query: 179 SMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLG 238
SMERGAFLVQQAMRAFRA+N+ESAKSRL++C +DIR++++ + +LCSQLGAVLGMLG
Sbjct: 174 SMERGAFLVQQAMRAFRARNIESAKSRLTMCADDIREELKSSEDNLDLCSQLGAVLGMLG 233
Query: 239 DCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSY 298
DCCR +GD AA+ Y+ +S EFL K P DLE++HTLSVSLNKIGDL+YY GDLQ+ARSY
Sbjct: 234 DCCRTLGDVPAAITYYEESAEFLSKPPAKDLELVHTLSVSLNKIGDLRYYDGDLQSARSY 293
Query: 299 YVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLES 356
Y RSL+VRR+AVK HS V SQV+D+A SLAKVADVDR++GNE AV+GF++ L S
Sbjct: 294 YARSLDVRRNAVKEHSAVASQVIDLATSLAKVADVDRNLGNESTAVEGFRKQFDALRS 351
>gi|168003207|ref|XP_001754304.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694406|gb|EDQ80754.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/363 (55%), Positives = 261/363 (71%), Gaps = 13/363 (3%)
Query: 24 SNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQ 83
S+ +CPF + + S+++ EN Q K + D AS KCP GYD+
Sbjct: 17 SDNISGQCPFGYGKSE--GSKESHENGVDEQG-----KERKDENTEASAGGKCPLGYDSV 69
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVV 143
SFKIGP SC++C+ALL + S+C PC H++C+ CISRF+DCPLCG DIE IE+D +Q +V
Sbjct: 70 SFKIGPFSCVLCRALLHDSSRCVPCRHIFCRGCISRFQDCPLCGLDIENIESDPEMQGLV 129
Query: 144 DRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAK 203
DRFIEGHARIKR S EE AG + K YED+S+ERG+FLVQQAMRAF+ N+ESAK
Sbjct: 130 DRFIEGHARIKRPTVQSGAEEASAGRDIK--YEDISVERGSFLVQQAMRAFQGNNLESAK 187
Query: 204 SRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
+RL LC ED R+++ R G TS CSQLGA+LGMLGDCC AM D D A+A + +SVE L K
Sbjct: 188 ARLGLCIEDSREEMSRSGATSTNCSQLGALLGMLGDCCGAMKDVDGAIASYEESVELLTK 247
Query: 264 LPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDV 323
LP D+E++H LSVSLNK+GDLKYY +L+AAR++Y R+LNVR +A + + VLDV
Sbjct: 248 LPDRDIEVVHALSVSLNKLGDLKYYAQELKAARAFYARALNVRLEATSDFTTLAPLVLDV 307
Query: 324 AVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKP---EEAGLEQRRLSVLEFLNNQ 380
AVSLAKVADVD ++GNE A +GFQ+A+K+L++L L P + A LE++RLSV+ FL NQ
Sbjct: 308 AVSLAKVADVDVALGNESAASEGFQDALKKLQNL-LPPKTADAASLEKKRLSVMTFLQNQ 366
Query: 381 LSE 383
L++
Sbjct: 367 LTD 369
>gi|302799741|ref|XP_002981629.1| hypothetical protein SELMODRAFT_154638 [Selaginella moellendorffii]
gi|300150795|gb|EFJ17444.1| hypothetical protein SELMODRAFT_154638 [Selaginella moellendorffii]
Length = 338
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/309 (53%), Positives = 217/309 (70%), Gaps = 12/309 (3%)
Query: 74 PKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKI 133
PKCP GYD SFK+GPLSC++C+ALLF+ ++C PC HV+C ACI+RF DCPLCG DI +
Sbjct: 17 PKCPLGYDTASFKLGPLSCLVCRALLFKAARCLPCRHVFCSACIARFSDCPLCGVDISGL 76
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRA 193
E D LQ +VD+FI+GHAR++R E V+YED S+ RG+FL+Q AMRA
Sbjct: 77 EEDGELQKLVDQFIQGHARVRRQQQQQ--------EEGPVVYEDASLARGSFLLQHAMRA 128
Query: 194 FRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAY 253
F+AQN+ES+K+RL LC ED R+ +E G ++E+CSQ GAVLG+LGDC RAMGD D A+
Sbjct: 129 FQAQNLESSKARLDLCVEDTREMMETKGASAEVCSQHGAVLGLLGDCLRAMGDLDGAMDK 188
Query: 254 FADSVEFLMKLPMDDL--EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVK 311
+A+SV L + D+ EI+H LSVSLNK+GDLKYY DL+ A + Y ++L VR A
Sbjct: 189 YAESVSVLQAITGVDVNAEIVHALSVSLNKLGDLKYYADDLECALALYKQALQVRDRAQA 248
Query: 312 RHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTL--KPEEAGLEQR 369
+++ ++ +DV VSLAKVADV R++G + A +GF AI RLE LT P + L +R
Sbjct: 249 GRNDLSAESIDVVVSLAKVADVQRAMGRDSEAAEGFTAAITRLEHLTCPPSPRDESLNKR 308
Query: 370 RLSVLEFLN 378
R SVL FL+
Sbjct: 309 RASVLGFLH 317
>gi|255638652|gb|ACU19631.1| unknown [Glycine max]
Length = 188
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 157/212 (74%), Gaps = 29/212 (13%)
Query: 1 MTPVCPFAKARPDDASPRKPGENSNKYPAECPFSKARPDDA-ASRKAVENSAKPQAEHDG 59
MTPVCPF KA ARPDD AS+K+ ENS K QAE +
Sbjct: 3 MTPVCPFVKA-------------------------ARPDDNNASKKSGENSMKHQAESES 37
Query: 60 DKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISR 119
K K + DSAS PKCPFGYD+QSFKIGPLSC +CQALLF+ SKC PCSHV+CKACISR
Sbjct: 38 -KVKKEVNDSASTSPKCPFGYDSQSFKIGPLSCTVCQALLFDTSKCVPCSHVFCKACISR 96
Query: 120 FKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
FKDCPLCGADI KIE D LQ VVDRFIEGHARIKRS ++DK E EA E+K+VIYEDVS
Sbjct: 97 FKDCPLCGADIVKIEPDANLQGVVDRFIEGHARIKRS-VSADKGE-EAAESKQVIYEDVS 154
Query: 180 MERGAFLVQQAMRAFRAQNVESAKSRLSLCTE 211
+ERG+FLVQQAMRAFRAQN+ESAKSRL+ C E
Sbjct: 155 LERGSFLVQQAMRAFRAQNLESAKSRLNFCAE 186
>gi|388513647|gb|AFK44885.1| unknown [Lotus japonicus]
Length = 157
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/157 (73%), Positives = 134/157 (85%)
Query: 236 MLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAA 295
MLGDCCRA+GDA +AV YF +SVEFL KLP DDLEI HTLSVSLNKIGDLKYY GDL+AA
Sbjct: 1 MLGDCCRAIGDASSAVTYFEESVEFLSKLPKDDLEITHTLSVSLNKIGDLKYYDGDLRAA 60
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
RSYY +SLNVRRD +K +SNV SQVLDVAVSLAKVADVDR+IG+E +A DGFQEAI LE
Sbjct: 61 RSYYFQSLNVRRDVMKHNSNVTSQVLDVAVSLAKVADVDRNIGDEKLATDGFQEAIDLLE 120
Query: 356 SLTLKPEEAGLEQRRLSVLEFLNNQLSEKPPESTPKV 392
SL+L+ E +GLEQRRLSVL+FL NQL++K ++ V
Sbjct: 121 SLSLESEGSGLEQRRLSVLDFLRNQLADKTEQTEQTV 157
>gi|255642319|gb|ACU21424.1| unknown [Glycine max]
Length = 189
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 127/187 (67%), Gaps = 29/187 (15%)
Query: 1 MTPVCPFAKA-RPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDG 59
MTPVCPF KA RPDD + AS+K+ ENS K Q E +
Sbjct: 3 MTPVCPFVKASRPDD-------------------------NNASKKSGENSMKHQVESE- 36
Query: 60 DKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISR 119
K K + DSAS PKCPFGYD+ SFKIGPLSC +CQALLF+ SKC PCSHV+CKACI R
Sbjct: 37 SKGKKEVNDSASTSPKCPFGYDSHSFKIGPLSCTVCQALLFDTSKCVPCSHVFCKACILR 96
Query: 120 FKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
FKDCPLCGADI KIE D LQ VVD FIEGHARIKRS +SDK E EA E+KKVIYEDVS
Sbjct: 97 FKDCPLCGADIVKIEPDANLQGVVDHFIEGHARIKRS-VSSDKGE-EATESKKVIYEDVS 154
Query: 180 MERGAFL 186
+ + FL
Sbjct: 155 LGKRFFL 161
>gi|307104190|gb|EFN52445.1| hypothetical protein CHLNCDRAFT_58886 [Chlorella variabilis]
Length = 439
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 134/246 (54%), Gaps = 21/246 (8%)
Query: 76 CP--FGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKI 133
CP FG AQ ++G C++C++L F+C T C H YC CI +DCP CGADI +
Sbjct: 82 CPLGFGSSAQGPRLGQFHCLLCKSLFFDCVV-TSCGHRYCAGCIRDARDCPACGADITSL 140
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRA 193
D Q++V+R+IE HA + + E G +KV R +FL+Q +RA
Sbjct: 141 APDPQTQELVERYIEVHA----GSSTIWELEGPPGAAQKVEGMAGERSRASFLLQLGLRA 196
Query: 194 FRAQNVESAKSRLSLCTEDIRDQIERM-----GNTSEL-------CSQLGAVLGMLGDCC 241
N SA+ R C ++ Q+ + G S L C +LGAV G LGDCC
Sbjct: 197 IATGNTGSARHRFQACQRQLQQQLAAVQQQTSGGGSVLPEVAVIQC-RLGAVSGCLGDCC 255
Query: 242 RAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVR 301
RA GDAD + ++ SVE L++ DD E LSVSLNK+G+L++ G+L+AA Y +
Sbjct: 256 RAEGDADGTLRHYQCSVE-LLRAAGDDPEAQQALSVSLNKVGELRHMQGELEAAAELYAQ 314
Query: 302 SLNVRR 307
+L +RR
Sbjct: 315 ALQLRR 320
>gi|452822202|gb|EME29224.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
Length = 335
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 155/333 (46%), Gaps = 31/333 (9%)
Query: 64 SDSMDSASIPPKCPFGYDAQSFK------IGPLSCMICQALLFECSKCTPCSHVYCKACI 117
S+ + A+ +CPFG+ ++ I PL C +C ALL+E + TPC H YCK C
Sbjct: 15 SNEANKANEVIECPFGFGTRATSTEWEKAIAPLCCPLCHALLYETQRATPCGHCYCKTCS 74
Query: 118 SRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYE- 176
+ KDC LC ADIE+ + V+ FI H SH + D+ + E
Sbjct: 75 FKVKDCLLCAADIEEFANAADVDSDVESFIRAH-----SHNIDLLQSDQTPSTQTSESET 129
Query: 177 DVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELC-SQLGAVLG 235
DV ++R FL+ QA++A + N SA SRL + + E M + C +Q +LG
Sbjct: 130 DVLLKRTTFLLYQALKAQKGGNSASALSRLQ------QAESELMHKKEQSCVNQRSIILG 183
Query: 236 MLGDCCRAMGDADAAVAYFADSVEFL-----MKLPMDDLEIIHTLSVSLNKIGDLKYYGG 290
L D + + A Y + L + + E++ LS S K GD+
Sbjct: 184 KLSDILCSENEPGKAAKYIEQACLLLENDLSTGEQLYEKELLGVLSTSHGKAGDIYALLE 243
Query: 291 DLQAARSYYVRSLNVRRDAVKRHSNV-PSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
+ A S+Y R++ ++ + +N S L A+ L K+A++ ++ A D Q
Sbjct: 244 NDDLAISHYSRAVALKEQLIGLDANADTSMSLQKALLLTKLAEI-LNLAARKRAYDA-QR 301
Query: 350 AIKRLESLTLKPEEAGLEQRRLSVLEFLNNQLS 382
++ L L + + L +R +V+E++NN ++
Sbjct: 302 VVESLGQL----DHSTLSERDQNVVEYVNNSIA 330
>gi|452822203|gb|EME29225.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 350
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 158/348 (45%), Gaps = 46/348 (13%)
Query: 64 SDSMDSASIPPKCPFGYDAQSFK------IGPLSCMICQALLFECSKCTPCSHVYCKACI 117
S+ + A+ +CPFG+ ++ I PL C +C ALL+E + TPC H YCK C
Sbjct: 15 SNEANKANEVIECPFGFGTRATSTEWEKAIAPLCCPLCHALLYETQRATPCGHCYCKTCS 74
Query: 118 SRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYE- 176
+ KDC LC ADIE+ + V+ FI H SH + D+ + E
Sbjct: 75 FKVKDCLLCAADIEEFANAADVDSDVESFIRAH-----SHNIDLLQSDQTPSTQTSESET 129
Query: 177 DVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELC-SQLGAVLG 235
DV ++R FL+ QA++A + N SA SRL + + E M + C +Q +LG
Sbjct: 130 DVLLKRTTFLLYQALKAQKGGNSASALSRLQ------QAESELMHKKEQSCVNQRSIILG 183
Query: 236 MLGD--------------CCRAMGDADAAVAYFADSVEFLMKLPMD------DLEIIHTL 275
L D C R + A + + L++ + + E++ L
Sbjct: 184 KLSDILYVFSLWYICTDLCVRCSENEPGKAAKYIEQACLLLENDLSTGEQLYEKELLGVL 243
Query: 276 SVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNV-PSQVLDVAVSLAKVADVD 334
S S K GD+ + A S+Y R++ ++ + +N S L A+ L K+A++
Sbjct: 244 STSHGKAGDIYALLENDDLAISHYSRAVALKEQLIGLDANADTSMSLQKALLLTKLAEI- 302
Query: 335 RSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSVLEFLNNQLS 382
++ A D Q ++ L L + + L +R +V+E++NN ++
Sbjct: 303 LNLAARKRAYDA-QRVVESLGQL----DHSTLSERDQNVVEYVNNSIA 345
>gi|413942101|gb|AFW74750.1| hypothetical protein ZEAMMB73_787325 [Zea mays]
Length = 192
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 48/72 (66%)
Query: 60 DKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISR 119
D + D +P K PFGYD+ + K+G LS ++CQ LL E KC C+H +CKACIS
Sbjct: 71 DHGEEKGKDPHVVPAKRPFGYDSNTSKLGLLSSIVCQTLLHESRKCKLCTHKFCKACISC 130
Query: 120 FKDCPLCGADIE 131
FKD PLCGADIE
Sbjct: 131 FKDSPLCGADIE 142
>gi|384249514|gb|EIE22995.1| hypothetical protein COCSUDRAFT_63384 [Coccomyxa subellipsoidea
C-169]
Length = 345
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 13/190 (6%)
Query: 182 RGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGN---TSELCSQLGAVLGMLG 238
R F++Q A+R+ N +A R + C E + E G + E C +LG + G G
Sbjct: 97 RAEFILQCALRSMAGGNFTAAAVRFARCRERLVTLAEASGANGWSEETCCRLGDIWGSQG 156
Query: 239 DCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGD----LQA 294
C + +G+ AA F DS+ L K P+ ++ H L+VS NK+GDL Y + L+
Sbjct: 157 MCEQRLGNLVAAEECFKDSLGVLQKSPVRSSQVAHALAVSHNKLGDLHYSNSNSKQELEL 216
Query: 295 ARSYYVRSLNVRR---DAVKRHSNVPSQV---LDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
ARS Y +L +R DA ++ + + V L++ SL KVAD++ +GN A +
Sbjct: 217 ARSNYREALAIREHAFDAPRQGDDSSADVSAALNLVTSLLKVADIEEVLGNGQAASECLA 276
Query: 349 EAIKRLESLT 358
+A L S++
Sbjct: 277 KADDALISVS 286
>gi|302830422|ref|XP_002946777.1| hypothetical protein VOLCADRAFT_87094 [Volvox carteri f.
nagariensis]
gi|300267821|gb|EFJ52003.1| hypothetical protein VOLCADRAFT_87094 [Volvox carteri f.
nagariensis]
Length = 520
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 76 CPFGYDAQSF---KIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEK 132
CP G+ Q ++ P C++C+ LL + + C H +C C+ RF+DCP+CGADI+
Sbjct: 4 CPLGFGGQGAGKDELSPYHCVLCRGLLHDPVVTSGCRHTFCAFCVRRFRDCPVCGADIDS 63
Query: 133 IEADTTLQDVVDRFIEGHARI 153
+ DT+L +++ + GHA++
Sbjct: 64 TKPDTSLASTINKILLGHAKL 84
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 60/139 (43%), Gaps = 28/139 (20%)
Query: 223 TSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKI 282
+SE +LG +LG DC R +GD AA+ Y+A S+ L E +SV+ NK
Sbjct: 239 SSETAIRLGTILGCKADCYRRLGDPAAALRYYAASLICLAHWRGRSREADSAISVTHNKQ 298
Query: 283 GDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVL--------------------- 321
GDL + G L A+ Y +L +RR+ V V V
Sbjct: 299 GDLLFMSGRLAEAKEQYEAALEIRREVVSAGPPVRETVAKGANGEAALATGAGAEGCAQV 358
Query: 322 -------DVAVSLAKVADV 333
D+AVSL KVADV
Sbjct: 359 AVVQDLCDLAVSLCKVADV 377
>gi|431932718|ref|YP_007245764.1| hypothetical protein Thimo_3471 [Thioflavicoccus mobilis 8321]
gi|431831021|gb|AGA92134.1| hypothetical protein Thimo_3471 [Thioflavicoccus mobilis 8321]
Length = 806
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 199 VESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSV 258
+E+A++ E R + R+G T E L L +G +A+G+ +AA A F +S+
Sbjct: 380 LEAARAAFGESLEIRRRLLGRVGETPEALRDLSISLNNVGQIDQALGELEAARAAFGESL 439
Query: 259 EF---LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSN 315
E L+ + E + LS+SLN +G + G+L+AAR+ + SL +RR + R
Sbjct: 440 EIRRRLLGRVGETPEALRDLSISLNNVGQIDQALGELEAARAAFGESLEIRRRLLGRVGE 499
Query: 316 VPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
P + D++VSL V +DR++G + A F E+++
Sbjct: 500 TPEALRDLSVSLDNVGQIDRALGELEAARAAFGESLE 536
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 199 VESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSV 258
+E+A++ E R + R+G T E L L +G RA+G+ +AA A F +S+
Sbjct: 524 LEAARAAFGESLEIGRRLLGRVGETPEALRDLSVSLDNVGQIDRALGELEAARAAFGESL 583
Query: 259 EF---LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSN 315
E L+ + E + LS+SLN +G + G+L+AAR+ + SL + R + R
Sbjct: 584 EIRRRLLGRVGETPEALRDLSISLNNVGQIDQALGELEAARAAFGESLEIGRRLLGRVGE 643
Query: 316 VPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
P + D++VSL V +DR++G + A F E+++
Sbjct: 644 TPEALRDLSVSLNNVGQIDRALGELEAARAAFGESLE 680
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 199 VESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSV 258
+E+A++ E R + R+G T E L L +G RA+G+ +AA A FA+S+
Sbjct: 284 LEAARAAFGESLEIGRRLLGRVGETPEALRDLSVSLDNVGRIDRALGELEAARAAFAESL 343
Query: 259 EF---LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSN 315
E L+ + E + LS+SL+ +G + G+L+AAR+ + SL +RR + R
Sbjct: 344 EIGRRLLARVGETPEALRDLSISLDNVGKIDRALGELEAARAAFGESLEIRRRLLGRVGE 403
Query: 316 VPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
P + D+++SL V +D+++G + A F E+++
Sbjct: 404 TPEALRDLSISLNNVGQIDQALGELEAARAAFGESLE 440
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 199 VESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSV 258
+E+A++ E R + R+G T E L L +G RA+G+ +AA A F +S+
Sbjct: 620 LEAARAAFGESLEIGRRLLGRVGETPEALRDLSVSLNNVGQIDRALGELEAARAAFGESL 679
Query: 259 EF---LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSN 315
E L+ + E + LS+SLN +G + G+L+AAR+ + SL + R + R
Sbjct: 680 EIGRRLLGRVGETPEALRDLSISLNNVGQIDQALGELEAARAAFGESLEIGRRLLGRVGE 739
Query: 316 VPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
P + D+++SL V +D+++G + A F E ++
Sbjct: 740 TPEALRDLSISLNNVGQIDQALGELEAARAAFAEGLE 776
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 199 VESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSV 258
+E+A++ E R + R+G T E L L +G +A+G+ +AA A F +S+
Sbjct: 428 LEAARAAFGESLEIRRRLLGRVGETPEALRDLSISLNNVGQIDQALGELEAARAAFGESL 487
Query: 259 EF---LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSN 315
E L+ + E + LSVSL+ +G + G+L+AAR+ + SL + R + R
Sbjct: 488 EIRRRLLGRVGETPEALRDLSVSLDNVGQIDRALGELEAARAAFGESLEIGRRLLGRVGE 547
Query: 316 VPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
P + D++VSL V +DR++G + A F E+++
Sbjct: 548 TPEALRDLSVSLDNVGQIDRALGELEAARAAFGESLE 584
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 199 VESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSV 258
VE A+ RL ED +E L L +G RA+G+ +AA A F +S+
Sbjct: 247 VEVARGRLGGRPED-----------AEALRDLSISLDNVGKIDRALGELEAARAAFGESL 295
Query: 259 EF---LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSN 315
E L+ + E + LSVSL+ +G + G+L+AAR+ + SL + R + R
Sbjct: 296 EIGRRLLGRVGETPEALRDLSVSLDNVGRIDRALGELEAARAAFAESLEIGRRLLARVGE 355
Query: 316 VPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
P + D+++SL V +DR++G + A F E+++
Sbjct: 356 TPEALRDLSISLDNVGKIDRALGELEAARAAFGESLE 392
>gi|336317545|ref|ZP_08572397.1| hypothetical protein Rhein_3833 [Rheinheimera sp. A13L]
gi|335878167|gb|EGM76114.1| hypothetical protein Rhein_3833 [Rheinheimera sp. A13L]
Length = 756
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L L +GD + +GD AA + +A S+ +L D L+++ LS
Sbjct: 485 LGDSLQVLRDLSVSLNKVGDIEQQLGDLHAAKSAYAQSLAIRQQLQSSLGDSLQVLRDLS 544
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VSLNK+GD++ GDLQAA++ Y +SL +R+ + + D++VSL KV D+ +
Sbjct: 545 VSLNKVGDIEQQLGDLQAAKAAYTQSLVIRQQLQSSLGDSLQVLRDLSVSLNKVGDIGQQ 604
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 605 LGDLQAAKAAYAQSL 619
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DD 268
IR Q++ +G++ ++ L +GD + +GD AA A + S+ +L D
Sbjct: 285 IRQQLQSSLGDSPQVLRDLSVSWNNVGDIEQQLGDLHAAKAVYVQSLTIFQQLQSSLGDS 344
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
+++ LSVS N +GD++ GDLQAA++ Y ++L +R+ R + P + D++VSL
Sbjct: 345 PQVLRDLSVSWNNVGDIEQQLGDLQAAKAAYTQNLIIRQQLQSRLGDSPQVLRDLSVSLE 404
Query: 329 KVADVDRSIGNEDVAVDGFQEAI 351
KV D+ + +G+ A + +++
Sbjct: 405 KVGDIGQQLGDLQAAKAAYAQSL 427
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DD 268
IR Q++ +G++ ++ L L +GD + +GD AA A + S+ +L D
Sbjct: 525 IRQQLQSSLGDSLQVLRDLSVSLNKVGDIEQQLGDLQAAKAAYTQSLVIRQQLQSSLGDS 584
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
L+++ LSVSLNK+GD+ GDLQAA++ Y +SL + + + P + D++VSL
Sbjct: 585 LQVLRDLSVSLNKVGDIGQQLGDLQAAKAAYAQSLAICQQLQSSLGDSPQVLRDLSVSLE 644
Query: 329 KVADVDRSI 337
KV D+++ +
Sbjct: 645 KVGDIEQQL 653
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DD 268
IR Q++ +G++ ++ L L +GD + +GD AA A +A S+ +L D
Sbjct: 573 IRQQLQSSLGDSLQVLRDLSVSLNKVGDIGQQLGDLQAAKAAYAQSLAICQQLQSSLGDS 632
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
+++ LSVSL K+GD++ DL AA++ Y +SL + + + P + D++VSL
Sbjct: 633 PQVLRDLSVSLEKVGDIEQQLDDLHAAKAAYAQSLAISQQLQSSLGDSPQVLRDLSVSLE 692
Query: 329 KVADVDRSIGNEDVAVDGFQEAI 351
KV D+++ +G+ A + +++
Sbjct: 693 KVGDIEQQLGDLHAAKAAYTQSL 715
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L +GD + +GD AA A + ++ +L D +++ LS
Sbjct: 341 LGDSPQVLRDLSVSWNNVGDIEQQLGDLQAAKAAYTQNLIIRQQLQSRLGDSPQVLRDLS 400
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VSL K+GD+ GDLQAA++ Y +SL + + + P + D++VSL KV D+++
Sbjct: 401 VSLEKVGDIGQQLGDLQAAKAAYAQSLAICQQLQSSLGDSPQVLRDLSVSLEKVGDIEQQ 460
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 461 LGDLQAAKAAYTQSL 475
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L L +GD + + D AA A +A S+ +L D +++ LS
Sbjct: 629 LGDSPQVLRDLSVSLEKVGDIEQQLDDLHAAKAAYAQSLAISQQLQSSLGDSPQVLRDLS 688
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
VSL K+GD++ GDL AA++ Y +SL +R+ + P + D+A++L KVA+++
Sbjct: 689 VSLEKVGDIEQQLGDLHAAKAAYTQSLAIRQQLQASLGDSPQVLRDLAIALKKVAEIE 746
>gi|229576526|gb|ACQ82653.1| At3g54360-like protein [Solanum hirtum]
gi|229576528|gb|ACQ82654.1| At3g54360-like protein [Solanum quitoense]
gi|229576530|gb|ACQ82655.1| At3g54360-like protein [Solanum quitoense]
gi|229576532|gb|ACQ82656.1| At3g54360-like protein [Solanum hirtum]
Length = 40
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 36/40 (90%)
Query: 193 AFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGA 232
AFRA N++SAKSR ++C +DIR+Q++RMGNTSELCSQL A
Sbjct: 1 AFRANNIDSAKSRFTMCADDIREQLQRMGNTSELCSQLEA 40
>gi|381159863|ref|ZP_09869095.1| hypothetical protein Thi970DRAFT_03631 [Thiorhodovibrio sp. 970]
gi|380877927|gb|EIC20019.1| hypothetical protein Thi970DRAFT_03631 [Thiorhodovibrio sp. 970]
Length = 1411
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGG 290
L +GD +G + AA+A F++ +E +L + D+L + L++SLN+IGDL+ G
Sbjct: 1068 LTKVGDLHLTVGKSRAALAAFSEGLELSRELAVRDPDNLVWLRDLTISLNRIGDLRLRSG 1127
Query: 291 DLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEA 350
++ A YY +L++ RD N D+A+SL KV D+ G+ A+D ++E+
Sbjct: 1128 EVNQALDYYQEALDIARDLTAEDPNNRVWGRDLAISLNKVGDILVQQGDPPAALDLYRES 1187
Query: 351 IK 352
++
Sbjct: 1188 LE 1189
Score = 58.5 bits (140), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 222 NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH---TLSVS 278
+ +E L L +GD + G A+AA+ + +++ L D +S++
Sbjct: 864 DNAEAQRDLSVTLDRIGDIEKESGQAEAALTAYEETLAISRALAAGDATNARWQRDVSIA 923
Query: 279 LNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIG 338
K+GD+ GD A + Y L RR KR N P+ D+AVSL K DV G
Sbjct: 924 WEKVGDISLQQGDAAGALAAYEEVLATRRSLAKREPNSPTARRDLAVSLNKTGDVRVLRG 983
Query: 339 NEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSVLE 375
+ A+ +QEA+ ++ L + Q LSV +
Sbjct: 984 DTQGALAAYQEAMTLVQVLVASDPDNTKWQHDLSVTQ 1020
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 214 RDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADS---VEFLMKLPMDDLE 270
R +R N+ L L GD GD A+A + ++ V+ L+ D+ +
Sbjct: 952 RSLAKREPNSPTARRDLAVSLNKTGDVRVLRGDTQGALAAYQEAMTLVQVLVASDPDNTK 1011
Query: 271 IIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKV 330
H LSV+ +IG+++ G AA + Y L +RR + + D V+L KV
Sbjct: 1012 WQHDLSVTQERIGNIQLQLGQTDAALTSYENVLGIRRALSESDPENSDWIRDTLVALTKV 1071
Query: 331 ADVDRSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSV 373
D+ ++G A+ F E ++ L ++ + + R L++
Sbjct: 1072 GDLHLTVGKSRAALAAFSEGLELSRELAVRDPDNLVWLRDLTI 1114
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEII---HTLSVSLNKIGDLKYYGG 290
L +GD G+ + A+ Y+ ++++ L +D L++SLNK+GD+ G
Sbjct: 1116 LNRIGDLRLRSGEVNQALDYYQEALDIARDLTAEDPNNRVWGRDLAISLNKVGDILVQQG 1175
Query: 291 DLQAARSYYVRSLNV-RRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
D AA Y SL + R A + SN+ Q D+ +L ++A+V + G+ A+ +E
Sbjct: 1176 DPPAALDLYRESLEICRGHAEQDPSNIQGQ-RDLWYTLRRIANVQVTTGDRAAALKAHEE 1234
Query: 350 AIKRLESLTLKPEEAGLEQRRL 371
A+ L L + E + Q +
Sbjct: 1235 ALAMLRPLAERHRENSILQSNI 1256
Score = 43.5 bits (101), Expect = 0.19, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 245 GDADAAVAYFADSVEFLMKLPMDDLE---IIHTLSVSLNKIGDLKYYGGDLQAARSYYVR 301
GD AA+ +++ L L E + + +SL IGDL GD+ AA + Y
Sbjct: 1223 GDRAAALKAHEEALAMLRPLAERHRENSILQSNILLSLQDIGDLHLQQGDVAAALAAYQE 1282
Query: 302 SLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKP 361
L + + ++ +VA+S K+ D GN A F+ A+ +E L +
Sbjct: 1283 GLPIAKALAASDTDNADHQRNVAISFNKIGDAQLKNGNSAAARMAFEHALDIVEELVARD 1342
Query: 362 EEAGLEQRRLSV 373
+ L QR L +
Sbjct: 1343 QHNTLWQRDLFI 1354
Score = 42.4 bits (98), Expect = 0.43, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLE---IIHTLSVSLNKIGDLKYYGGDLQ 293
+G+ +G DAA+ + + + L D E I V+L K+GDL G +
Sbjct: 1023 IGNIQLQLGQTDAALTSYENVLGIRRALSESDPENSDWIRDTLVALTKVGDLHLTVGKSR 1082
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AA + + L + R+ R + + D+ +SL ++ D+ G + A+D +QEA+
Sbjct: 1083 AALAAFSEGLELSRELAVRDPDNLVWLRDLTISLNRIGDLRLRSGEVNQALDYYQEALDI 1142
Query: 354 LESLTLKPEEAGLEQRRLSV 373
LT + + R L++
Sbjct: 1143 ARDLTAEDPNNRVWGRDLAI 1162
Score = 39.3 bits (90), Expect = 3.5, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Query: 213 IRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLP---MDDL 269
+R ER S L S + L +GD GD AA+A + + + L D+
Sbjct: 1239 LRPLAERHRENSILQSNILLSLQDIGDLHLQQGDVAAALAAYQEGLPIAKALAASDTDNA 1298
Query: 270 EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAK 329
+ +++S NKIGD + G+ AAR + +L++ + V R + D+ +S A
Sbjct: 1299 DHQRNVAISFNKIGDAQLKNGNSAAARMAFEHALDIVEELVARDQHNTLWQRDLFISHAI 1358
Query: 330 VADVDRSIGNEDVAVDGFQEAIKRLESL 357
G VA F++A+ E L
Sbjct: 1359 TGGWHADHGEARVARMHFEKALALGEEL 1386
>gi|424661202|ref|ZP_18098448.1| leucine Rich Repeat family protein [Vibrio cholerae HE-16]
gi|408049517|gb|EKG84715.1| leucine Rich Repeat family protein [Vibrio cholerae HE-16]
Length = 586
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A + S+ +L D ++ LS
Sbjct: 341 LGDSPQVLRDLSVSFIKLGDIEQQLGDLHAAKAAYTQSLAIFQQLHTSLGDSPHVLRDLS 400
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS NK+GD++ G L AA++ Y +SL +R+ + P + D++VS + + D+++
Sbjct: 401 VSFNKLGDIEQQLGYLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLSVSFSNLGDIEQQ 460
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 461 LGDLHAAKAAYTQSL 475
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DD 268
IR Q+ +G++ + L LGD + +GD AA A + S+ +L D
Sbjct: 429 IRQQLHTSLGDSPPVLRDLSVSFSNLGDIEQQLGDLHAAKAAYTQSLAIDQQLHTSLGDS 488
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
++ LSVS NK+GD++ GDL AA++ Y +SL + + + P + D+ +SL
Sbjct: 489 PHVLRDLSVSFNKLGDIEQQLGDLHAAKAAYAQSLAIFQQLHSTLGDSPPVLRDLIISLR 548
Query: 329 KVADVDRSIGNEDVAV 344
VA+++R +G + A
Sbjct: 549 DVANIERLLGRDTAAT 564
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DD 268
IR Q+ G++ + L L LG+ + +GD AA A + S+ +L D
Sbjct: 285 IRQQLHTSFGDSPPVLRGLSVSLSNLGEIEQQLGDLHAAKAAYTQSLAIDQQLHSSLGDS 344
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
+++ LSVS K+GD++ GDL AA++ Y +SL + + + P + D++VS
Sbjct: 345 PQVLRDLSVSFIKLGDIEQQLGDLHAAKAAYTQSLAIFQQLHTSLGDSPHVLRDLSVSFN 404
Query: 329 KVADVDRSIGNEDVAVDGFQEAI 351
K+ D+++ +G A + +++
Sbjct: 405 KLGDIEQQLGYLHAAKAAYTQSL 427
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 217 IERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIH 273
+ +G++ ++ L LG + +GD AA A ++ S+ +L D ++
Sbjct: 242 LTSLGDSPQVLRDLSVSFNKLGYIEQRLGDLHAAKASYSQSLAIRQQLHTSFGDSPPVLR 301
Query: 274 TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADV 333
LSVSL+ +G+++ GDL AA++ Y +SL + + + P + D++VS K+ D+
Sbjct: 302 GLSVSLSNLGEIEQQLGDLHAAKAAYTQSLAIDQQLHSSLGDSPQVLRDLSVSFIKLGDI 361
Query: 334 DRSIGNEDVAVDGFQEAIKRLESL 357
++ +G+ A + +++ + L
Sbjct: 362 EQQLGDLHAAKAAYTQSLAIFQQL 385
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ + L LGD + +G AA A + S+ +L D ++ LS
Sbjct: 389 LGDSPHVLRDLSVSFNKLGDIEQQLGYLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLS 448
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS + +GD++ GDL AA++ Y +SL + + + P + D++VS K+ D+++
Sbjct: 449 VSFSNLGDIEQQLGDLHAAKAAYTQSLAIDQQLHTSLGDSPHVLRDLSVSFNKLGDIEQQ 508
Query: 337 IGNEDVAVDGFQEAIKRLESL 357
+G+ A + +++ + L
Sbjct: 509 LGDLHAAKAAYAQSLAIFQQL 529
>gi|424010696|ref|ZP_17753627.1| tetratricopeptide repeat family protein, partial [Vibrio cholerae
HC-44C1]
gi|408862769|gb|EKM02271.1| tetratricopeptide repeat family protein, partial [Vibrio cholerae
HC-44C1]
Length = 359
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 214 RDQIE--RMGNTSELCSQLGAVLGMLGDC-CRAMGDADAAVAYFADSVEFLMKLPM---D 267
RD +E + G +++ Q LG LGD C A+A AY A S+ +L D
Sbjct: 189 RDLVEQRKQGRSAKEKRQYSIALGRLGDLLCEVNQYAEAKTAY-AQSLAIGQQLHTSLGD 247
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
+++ LSVS NK+GD++ GDL AA++ Y +SL +R+ + P + D++VS
Sbjct: 248 SPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLSVSF 307
Query: 328 AKVADVDRSIGNEDVAVDGFQEAI 351
K+ ++++ +G+ A + +++
Sbjct: 308 NKLGEIEQQLGDLHAAKAAYAQSL 331
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A + S+ +L D ++ LS
Sbjct: 245 LGDSPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLS 304
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVA 331
VS NK+G+++ GDL AA++ Y +SL + + + P + D++VS +K+
Sbjct: 305 VSFNKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLG 359
>gi|423736362|ref|ZP_17709550.1| tetratricopeptide repeat family protein, partial [Vibrio cholerae
HC-41B1]
gi|408628795|gb|EKL01521.1| tetratricopeptide repeat family protein, partial [Vibrio cholerae
HC-41B1]
Length = 355
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 214 RDQIE--RMGNTSELCSQLGAVLGMLGDC-CRAMGDADAAVAYFADSVEFLMKLPM---D 267
RD +E + G +++ Q LG LGD C A+A AY A S+ +L D
Sbjct: 189 RDLVEQRKQGRSAKEKRQYSIALGRLGDLLCEVNQYAEAKTAY-AQSLAIGQQLHTSLGD 247
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
+++ LSVS NK+GD++ GDL AA++ Y +SL +R+ + P + D++VS
Sbjct: 248 SPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLSVSF 307
Query: 328 AKVADVDRSIGNEDVAVDGFQEAI 351
K+ ++++ +G+ A + +++
Sbjct: 308 NKLGEIEQQLGDLHAAKAAYAQSL 331
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A + S+ +L D ++ LS
Sbjct: 245 LGDSPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLS 304
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
VS NK+G+++ GDL AA++ Y +SL + + + P + D++VS
Sbjct: 305 VSFNKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPQVLRDLSVSF 355
>gi|419838402|ref|ZP_14361838.1| tetratricopeptide repeat family protein [Vibrio cholerae HC-46B1]
gi|408855436|gb|EKL95138.1| tetratricopeptide repeat family protein [Vibrio cholerae HC-46B1]
Length = 634
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKL--PMDDL 269
IR Q+ +G++ + L LG+ +GD AA A + S+ +L + DL
Sbjct: 477 IRQQLHTSLGDSPPVLRDLSVSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDL 536
Query: 270 -EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
++ LSVS NK+GD++ GDL AA++ Y +SL + + + P + D+ +SL
Sbjct: 537 PHVLRDLSVSFNKLGDIEQQLGDLHAAKAAYAQSLAIFQQLHSTLGDSPPVLRDLIISLR 596
Query: 329 KVADVDRSIGNEDVAV 344
VA+++R +G + A
Sbjct: 597 DVANIERLLGRDTAAT 612
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 214 RDQIE--RMGNTSELCSQLGAVLGMLGDC-CRAMGDADAAVAYFADSVEFLMKLPM---D 267
RD +E + G +++ Q LG LGD C A+A AY A S+ +L D
Sbjct: 189 RDLVEQRKQGRSAKEKRQYSIALGRLGDLLCEVNQYAEAKTAY-AQSLAIGQQLHTSLGD 247
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
+++ LSVS NK+GD++ GDL AA++ Y +SL +R+ + P + D++VS
Sbjct: 248 SPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLSVSF 307
Query: 328 AKVADVDRSIGNEDVAVDGFQEAI 351
K+ ++++ +G+ A + +++
Sbjct: 308 NKLGEIEQQLGDLHAAKAAYAQSL 331
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A + S+ +L D ++ LS
Sbjct: 245 LGDSPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLS 304
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS NK+G+++ GDL AA++ Y +SL + + + P + D++VS +K+ D+++
Sbjct: 305 VSFNKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLGDIEQQ 364
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 365 LGDLHAAKAAYAQSL 379
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DD 268
IR Q+ +G++ + L LG+ + +GD AA A +A S+ +L D
Sbjct: 285 IRQQLHSSLGDSPPVLRDLSVSFNKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDS 344
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
+++ LSVS +K+GD++ GDL AA++ Y +SL + + + P + D++VS +
Sbjct: 345 PQVLRDLSVSFSKLGDIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLSVSFS 404
Query: 329 KVADVDRSIGN 339
K+ ++++ +G+
Sbjct: 405 KLGEIEQQLGD 415
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LG+ + +GD AA A + S+ +L D ++ LS
Sbjct: 437 LGDSPQVLRDLSVSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLS 496
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS + +G+++ GDL AA++ Y +SL + + ++P + D++VS K+ D+++
Sbjct: 497 VSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDLPHVLRDLSVSFNKLGDIEQQ 556
Query: 337 IGNEDVAVDGFQEAIKRLESL 357
+G+ A + +++ + L
Sbjct: 557 LGDLHAAKAAYAQSLAIFQQL 577
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ + L LG+ + +GD AA A A S+ +L D +++ LS
Sbjct: 389 LGDSPPVLRDLSVSFSKLGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLS 448
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS +K+G+++ GDL AA++ Y +SL +R+ + P + D++VS + + +++
Sbjct: 449 VSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLSVSFSNLGEIEEQ 508
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 509 LGDLHAAKAAYTQSL 523
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A +A S+ +L D ++ LS
Sbjct: 341 LGDSPQVLRDLSVSFSKLGDIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLS 400
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS +K+G+++ GDL AA++ + +SL + + + P + D++VS +K+ ++++
Sbjct: 401 VSFSKLGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLGEIEQQ 460
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 461 LGDLHAAKAAYTQSL 475
>gi|229521788|ref|ZP_04411206.1| TPR repeat-containing protein [Vibrio cholerae TM 11079-80]
gi|229341382|gb|EEO06386.1| TPR repeat-containing protein [Vibrio cholerae TM 11079-80]
Length = 542
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKL--PMDDL 269
IR Q+ +G++ + L LG+ +GD AA A + S+ +L + DL
Sbjct: 385 IRQQLHTSLGDSPPVLRDLSVSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDL 444
Query: 270 -EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
++ LSVS NK+GD++ GDL AA++ Y +SL + + + P + D+ +SL
Sbjct: 445 PHVLRDLSVSFNKLGDIEQQLGDLHAAKAAYAQSLAIFQQLHSTLGDSPPVLRDLIISLR 504
Query: 329 KVADVDRSIGNEDVAV 344
VA+++R +G + A
Sbjct: 505 DVANIERLLGRDTAAT 520
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 214 RDQIE--RMGNTSELCSQLGAVLGMLGDC-CRAMGDADAAVAYFADSVEFLMKLPM---D 267
RD +E + G +++ Q LG LGD C A+A AY A S+ +L D
Sbjct: 193 RDLVEQRKQGRSAKEKRQYSIALGRLGDLLCEVNQYAEAKTAY-AQSLAIDQQLHTSLGD 251
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
+++ LSVS NK+GD++ GDL AA++ Y +SL +R+ + P + D++VS
Sbjct: 252 SPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLSVSF 311
Query: 328 AKVADVDRSIGNEDVAVDGFQEAI 351
K+ ++++ +G+ A + +++
Sbjct: 312 NKLGEIEQQLGDLHAAKAAYAQSL 335
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DD 268
IR Q+ +G++ + L LG+ + +GD AA A +A S+ +L D
Sbjct: 289 IRQQLHSSLGDSPPVLRDLSVSFNKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDS 348
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
+++ LSVS +K+G+++ GDL AA++ Y +SL +R+ + P + D++VS +
Sbjct: 349 PQVLRDLSVSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLSVSFS 408
Query: 329 KVADVDRSIGNEDVAVDGFQEAI 351
+ +++ +G+ A + +++
Sbjct: 409 NLGEIEEQLGDLHAAKAAYTQSL 431
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A + S+ +L D ++ LS
Sbjct: 249 LGDSPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLS 308
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS NK+G+++ GDL AA++ Y +SL + + + P + D++VS +K+ ++++
Sbjct: 309 VSFNKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLGEIEQQ 368
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 369 LGDLHAAKAAYTQSL 383
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LG+ + +GD AA A + S+ +L D ++ LS
Sbjct: 345 LGDSPQVLRDLSVSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLS 404
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS + +G+++ GDL AA++ Y +SL + + ++P + D++VS K+ D+++
Sbjct: 405 VSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDLPHVLRDLSVSFNKLGDIEQQ 464
Query: 337 IGNEDVAVDGFQEAIKRLESL 357
+G+ A + +++ + L
Sbjct: 465 LGDLHAAKAAYAQSLAIFQQL 485
>gi|341877844|gb|EGT33779.1| hypothetical protein CAEBREN_12747 [Caenorhabditis brenneri]
Length = 385
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD-----CPLCGADIEKIEADTTLQDVVD 144
+ C IC A+L + CTPC H +C CI+++ + CP+C ++ + + ++D+V+
Sbjct: 27 VECCICMAVLHNAASCTPCLHTFCIGCIAKWNETNNGKCPMCRVSVKDVSPNWVMRDLVN 86
Query: 145 RFIEGHARIKRSHTNSDKEEDEAGE-----------NKKVIY-EDVSMERGA 184
+++ ++R T +KEE + E N+K++Y E ++ RGA
Sbjct: 87 SYLQMKPALQR--TEEEKEELDRSELTYIVKWLGETNEKLLYIESLASLRGA 136
>gi|421344952|ref|ZP_15795354.1| leucine Rich Repeat family protein [Vibrio cholerae HC-43B1]
gi|395939035|gb|EJH49721.1| leucine Rich Repeat family protein [Vibrio cholerae HC-43B1]
Length = 638
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKL--PMDDL 269
IR Q+ +G++ + L LG+ +GD AA A + S+ +L + DL
Sbjct: 481 IRQQLHTSLGDSPPVLRDLSVSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDL 540
Query: 270 -EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
++ LSVS NK+GD++ GDL AA++ Y +SL + + + P + D+ +SL
Sbjct: 541 PHVLRDLSVSFNKLGDIEQQLGDLHAAKAAYAQSLAIFQQLHSTLGDSPPVLRDLIISLR 600
Query: 329 KVADVDRSIGNEDVAV 344
VA+++R +G + A
Sbjct: 601 DVANIERLLGRDTAAT 616
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 214 RDQIE--RMGNTSELCSQLGAVLGMLGDC-CRAMGDADAAVAYFADSVEFLMKLPM---D 267
RD +E + G +++ Q LG LGD C A+A AY A S+ +L D
Sbjct: 193 RDLVEQRKQGRSAKEKRQYSIALGRLGDLLCEVNQYAEAKTAY-AQSLAIGQQLHTSLGD 251
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
+++ LSVS NK+GD++ GDL AA++ Y +SL +R+ + P + D++VS
Sbjct: 252 SPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLSVSF 311
Query: 328 AKVADVDRSIGNEDVAVDGFQEAI 351
K+ ++++ +G+ A + +++
Sbjct: 312 NKLGEIEQQLGDLHAAKAAYAQSL 335
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A + S+ +L D ++ LS
Sbjct: 249 LGDSPQVLRDLSVSFNKLGDIEQQLGDLHAAKAAYTQSLAIRQQLHSSLGDSPPVLRDLS 308
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS NK+G+++ GDL AA++ Y +SL + + + P + D++VS +K+ D+++
Sbjct: 309 VSFNKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLGDIEQQ 368
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 369 LGDLHAAKAAYAQSL 383
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DD 268
IR Q+ +G++ + L LG+ + +GD AA A +A S+ +L D
Sbjct: 289 IRQQLHSSLGDSPPVLRDLSVSFNKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDS 348
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
+++ LSVS +K+GD++ GDL AA++ Y +SL + + + P + D++VS +
Sbjct: 349 PQVLRDLSVSFSKLGDIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLSVSFS 408
Query: 329 KVADVDRSIGN 339
K+ ++++ +G+
Sbjct: 409 KLGEIEQQLGD 419
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LG+ + +GD AA A + S+ +L D ++ LS
Sbjct: 441 LGDSPQVLRDLSVSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLS 500
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS + +G+++ GDL AA++ Y +SL + + ++P + D++VS K+ D+++
Sbjct: 501 VSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDLPHVLRDLSVSFNKLGDIEQQ 560
Query: 337 IGNEDVAVDGFQEAIKRLESL 357
+G+ A + +++ + L
Sbjct: 561 LGDLHAAKAAYAQSLAIFQQL 581
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ + L LG+ + +GD AA A A S+ +L D +++ LS
Sbjct: 393 LGDSPPVLRDLSVSFSKLGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLS 452
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS +K+G+++ GDL AA++ Y +SL +R+ + P + D++VS + + +++
Sbjct: 453 VSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLSVSFSNLGEIEEQ 512
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 513 LGDLHAAKAAYTQSL 527
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A +A S+ +L D ++ LS
Sbjct: 345 LGDSPQVLRDLSVSFSKLGDIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLS 404
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS +K+G+++ GDL AA++ + +SL + + + P + D++VS +K+ ++++
Sbjct: 405 VSFSKLGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLGEIEQQ 464
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 465 LGDLHAAKAAYTQSL 479
>gi|421356318|ref|ZP_15806648.1| leucine Rich Repeat family protein [Vibrio cholerae HE-45]
gi|395949432|gb|EJH60058.1| leucine Rich Repeat family protein [Vibrio cholerae HE-45]
Length = 586
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLK 286
L L LG+ +GD AA A +A S+ +L D ++ LSVS NK+GD++
Sbjct: 447 LSVSLSKLGEIEEQLGDLHAAKAAYAQSLAICQQLHTSLGDSPHVLRDLSVSFNKLGDIE 506
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAV 344
GDL AA++ Y +SL + + + P + D+ +SL VA+++R +G + A
Sbjct: 507 QQLGDLHAAKAAYAQSLAIFQQLHSTLGDSPPVLRDLIISLRDVANIERLLGRDTAAT 564
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+GN+ ++ L LG+ + +GD AA A +A S+ +L D + LS
Sbjct: 389 LGNSPQVLRDLSVSFIKLGEIEQQLGDLHAAKAAYAQSLAIDQQLHTSLGDSPPGLRDLS 448
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VSL+K+G+++ GDL AA++ Y +SL + + + P + D++VS K+ D+++
Sbjct: 449 VSLSKLGEIEEQLGDLHAAKAAYAQSLAICQQLHTSLGDSPHVLRDLSVSFNKLGDIEQQ 508
Query: 337 IGNEDVAVDGFQEAIKRLESL 357
+G+ A + +++ + L
Sbjct: 509 LGDLHAAKAAYAQSLAIFQQL 529
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ + L LG+ + +GD AA A A S+ +L D +++ LS
Sbjct: 293 LGDSPPVLRDLSVSFSKLGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLS 352
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS +K+G+++ GDL AA++ Y +SL + + N P + D++VS K+ ++++
Sbjct: 353 VSFSKLGEIEQQLGDLHAAKAAYAQSLAICQQLHSSLGNSPQVLRDLSVSFIKLGEIEQQ 412
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 413 LGDLHAAKAAYAQSL 427
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LG+ + +GD AA A +A S+ +L + +++ LS
Sbjct: 341 LGDSPQVLRDLSVSFSKLGEIEQQLGDLHAAKAAYAQSLAICQQLHSSLGNSPQVLRDLS 400
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS K+G+++ GDL AA++ Y +SL + + + P + D++VSL+K+ +++
Sbjct: 401 VSFIKLGEIEQQLGDLHAAKAAYAQSLAIDQQLHTSLGDSPPGLRDLSVSLSKLGEIEEQ 460
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 461 LGDLHAAKAAYAQSL 475
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 217 IERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIH 273
+ +G++ ++ L LG+ + +GD AA A +A S+ +L D ++
Sbjct: 242 LTSLGDSPQVLRDLSVSFSKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLR 301
Query: 274 TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADV 333
LSVS +K+G+++ GDL AA++ + +SL + + + P + D++VS +K+ ++
Sbjct: 302 DLSVSFSKLGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLGEI 361
Query: 334 DRSIGNEDVAVDGFQEAI 351
++ +G+ A + +++
Sbjct: 362 EQQLGDLHAAKAAYAQSL 379
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 214 RDQIE--RMGNTSELCSQLGAVLGMLGDC-CRAMGDADAAVAYFADSVEFLMKLPM---D 267
RD +E + G +++ Q LG LGD C A+A AY A S+ +L D
Sbjct: 189 RDLVEQRKQGRSAQEKRQYSIALGRLGDLLCEVNQYAEAKTAY-AQSLAIFQQLLTSLGD 247
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
+++ LSVS +K+G+++ GDL AA++ Y +SL + + + P + D++VS
Sbjct: 248 SPQVLRDLSVSFSKLGEIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLSVSF 307
Query: 328 AKVADVDRSIGN 339
+K+ ++++ +G+
Sbjct: 308 SKLGEIEQQLGD 319
>gi|424010698|ref|ZP_17753628.1| tetratricopeptide repeat family protein [Vibrio cholerae HC-44C1]
gi|408862654|gb|EKM02159.1| tetratricopeptide repeat family protein [Vibrio cholerae HC-44C1]
Length = 288
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKL--PMDDL 269
IR Q+ +G++ + L LG+ +GD AA A + S+ +L + DL
Sbjct: 131 IRQQLHTSLGDSPPVLRDLSVSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDL 190
Query: 270 -EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
++ LSVS NK+GD++ GDL AA++ Y +SL + + + P + D+ +SL
Sbjct: 191 PHVLRDLSVSFNKLGDIEQQLGDLHAAKAAYAQSLAIFQQLHSTLGDSPPVLRDLIISLR 250
Query: 329 KVADVDRSIGNEDVAV 344
VA+++R +G + A
Sbjct: 251 DVANIERLLGRDTAAT 266
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A +A S+ +L D ++ LS
Sbjct: 43 LGDSPQVLRDLSVSFSKLGDIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLS 102
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS +K+G+++ GDL AA++ Y +SL +R+ + P + D++VS + + +++
Sbjct: 103 VSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLSVSFSNLGEIEEQ 162
Query: 337 IGNEDVAVDGFQEAI 351
+G+ A + +++
Sbjct: 163 LGDLHAAKAAYTQSL 177
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ + L LG+ + +GD AA A + S+ +L D ++ LS
Sbjct: 91 LGDSPPVLRDLSVSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLS 150
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS + +G+++ GDL AA++ Y +SL + + ++P + D++VS K+ D+++
Sbjct: 151 VSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDLPHVLRDLSVSFNKLGDIEQQ 210
Query: 337 IGNEDVAVDGFQEAIKRLESL 357
+G+ A + +++ + L
Sbjct: 211 LGDLHAAKAAYAQSLAIFQQL 231
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
LG+ + +GD AA A A S+ +L D +++ LSVS +K+GD++ GDL
Sbjct: 12 LGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLGDIEQQLGDLH 71
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
AA++ Y +SL + + + P + D++VS +K+ ++++ +G+ A + +++
Sbjct: 72 AAKAAYAQSLAICQQLHTSLGDSPPVLRDLSVSFSKLGEIEQQLGDLHAAKAAYTQSL 129
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 47/77 (61%)
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
LSVS +K+G+++ GDL AA++ + +SL + + + P + D++VS +K+ D++
Sbjct: 5 LSVSFSKLGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLSVSFSKLGDIE 64
Query: 335 RSIGNEDVAVDGFQEAI 351
+ +G+ A + +++
Sbjct: 65 QQLGDLHAAKAAYAQSL 81
>gi|423736364|ref|ZP_17709551.1| tetratricopeptide repeat family protein, partial [Vibrio cholerae
HC-41B1]
gi|408628663|gb|EKL01392.1| tetratricopeptide repeat family protein, partial [Vibrio cholerae
HC-41B1]
Length = 206
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 213 IRDQIER-MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKL--PMDDL 269
IR Q+ +G++ + L LG+ +GD AA A + S+ +L + DL
Sbjct: 49 IRQQLHTSLGDSPPVLRDLSVSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDL 108
Query: 270 -EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
++ LSVS NK+GD++ GDL AA++ Y +SL + + + P + D+ +SL
Sbjct: 109 PHVLRDLSVSFNKLGDIEQQLGDLHAAKAAYAQSLAIFQQLHSTLGDSPPVLRDLIISLR 168
Query: 329 KVADVDRSIGNEDVAV 344
VA+++R +G + A
Sbjct: 169 DVANIERLLGRDTAAT 184
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LG+ + +GD AA A + S+ +L D ++ LS
Sbjct: 9 LGDSPQVLRDLSVSFSKLGEIEQQLGDLHAAKAAYTQSLAIRQQLHTSLGDSPPVLRDLS 68
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRS 336
VS + +G+++ GDL AA++ Y +SL + + ++P + D++VS K+ D+++
Sbjct: 69 VSFSNLGEIEEQLGDLHAAKAAYTQSLAIDQQLHTSLGDLPHVLRDLSVSFNKLGDIEQQ 128
Query: 337 IGNEDVAVDGFQEAIKRLESL 357
+G+ A + +++ + L
Sbjct: 129 LGDLHAAKAAYAQSLAIFQQL 149
>gi|72392150|ref|XP_846369.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359535|gb|AAX79970.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802905|gb|AAZ12810.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 278
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADI-EKIEADTTLQDVVDRFIE 148
++C IC E ++C PC H++CK CISR + CPLC + I E + A+ L + V+ +
Sbjct: 9 VTCSICLEHWVEPTECLPCRHIFCKKCISRVERCPLCRSHIREMMSANRFLLEAVEGVV- 67
Query: 149 GHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSL 208
GH +++ N+++ +EA +K++ E G FL + A+ E+A+ +
Sbjct: 68 GHDGVEQRVRNAEQRAEEA---EKILAEIA----GPFLETDNETCWEAKARENAEKVIG- 119
Query: 209 CTEDIRDQIE 218
+R Q+E
Sbjct: 120 ---GLRSQLE 126
>gi|261330055|emb|CBH13039.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 286
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADI-EKIEADTTLQDVVDRFIE 148
++C IC E ++C PC H++CK CISR + CPLC + I E + A+ L + V+ +
Sbjct: 9 VTCSICLEHWVEPTECLPCRHIFCKKCISRVERCPLCRSHIREMMSANRFLLEAVEGVV- 67
Query: 149 GHARIKRSHTNSDKEEDEA 167
GH +++ N+++ +EA
Sbjct: 68 GHDGVEQRVRNAEQRAEEA 86
>gi|348516363|ref|XP_003445708.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Oreochromis
niloticus]
Length = 604
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 27/119 (22%)
Query: 42 ASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFE 101
SR V +S+KP AE K+D M+ + L+C+ICQ LL +
Sbjct: 216 TSRPEVVSSSKPPAE----GTKTDKMEES-------------------LTCVICQDLLHD 252
Query: 102 CSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDRFIEGHARIKRS 156
C PC HV+C AC S + + CP C +E+I + L ++V+ ++ H RS
Sbjct: 253 CVSLQPCMHVFCAACYSGWMERSSLCPTCRCPVERIHKNHILNNLVEAYLIQHPEKCRS 311
>gi|405970129|gb|EKC35061.1| Polycomb complex protein BMI-1-B [Crassostrea gigas]
Length = 239
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIE------KIEADTTL 139
++C +C L+E S T C H +CK CI R+ + CP C I I D+TL
Sbjct: 64 ITCALCGGYLYEASTITECMHTFCKTCIVRYTERSLTCPTCDTPIHPTDPFVHIRHDSTL 123
Query: 140 QDVVDRFIEGHARI--KRSHTNSDKEEDEAGE 169
QD+V R + A + KR + E E GE
Sbjct: 124 QDIVYRLLPKVAEVEQKREIEFYENHEKETGE 155
>gi|410922559|ref|XP_003974750.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Takifugu
rubripes]
Length = 628
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL++C PC HV+C AC S + + CP C +E+I + L ++V+
Sbjct: 250 LTCVICQDLLYDCVSLQPCMHVFCAACYSGWMERSPLCPTCRCPVERIRKNHILNNLVEA 309
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 310 YLIQHPEKCRS 320
>gi|47227694|emb|CAG09691.1| unnamed protein product [Tetraodon nigroviridis]
Length = 709
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC HV+C AC S + + CP C +E+I + L ++V+
Sbjct: 266 LTCVICQDLLHDCISLQPCMHVFCAACYSGWMERSSLCPTCRCPVERIRKNHILNNLVEA 325
Query: 146 FIEGH-ARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKS 204
++ H R+ T+S+ K+ + D F + A + ++++S +S
Sbjct: 326 YLLQHPGRL----THSEGRASRNMRKKRKLVSD-------FYMCSAEKCRSEEDLKSMES 374
Query: 205 RLSLCTEDIRDQIER 219
R + + ++ ++ER
Sbjct: 375 RNKITQDMLQPKVER 389
>gi|148222001|ref|NP_001089240.1| E3 ubiquitin-protein ligase CHFR [Xenopus laevis]
gi|82194968|sp|Q5FWP4.1|CHFR_XENLA RecName: Full=E3 ubiquitin-protein ligase CHFR; AltName:
Full=Checkpoint with forkhead and RING finger domains
protein
gi|58402639|gb|AAH89260.1| MGC85038 protein [Xenopus laevis]
Length = 625
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 72 IPPKCPFGY--DAQSFKIGP------LSCMICQALLFECSKCTPCSHVYCKACISRFKD- 122
+P CP G ++++ + P L+C+ICQ LL +C PC H +C AC S + +
Sbjct: 238 VPASCPIGASDESKTPSMKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMER 297
Query: 123 ---CPLCGADIEKIEADTTLQDVVDRFIEGHARIKRS 156
CP C +E+I + L ++V+ ++ H RS
Sbjct: 298 SSLCPTCRCPVERICKNHILNNLVEAYLIQHPEKCRS 334
>gi|260820978|ref|XP_002605811.1| hypothetical protein BRAFLDRAFT_123857 [Branchiostoma floridae]
gi|229291146|gb|EEN61821.1| hypothetical protein BRAFLDRAFT_123857 [Branchiostoma floridae]
Length = 638
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Query: 59 GDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACIS 118
G ++D+ S + PK P + + L C +CQ +L +C PC H +C C S
Sbjct: 256 GPSTETDAAGSKDVKPKPPPRDEMEET----LLCGVCQDILHDCISLQPCMHSFCAGCYS 311
Query: 119 RFKD----CPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKK 172
++ D CP C +++I + + ++V +++ H KRS EED A NKK
Sbjct: 312 QWMDMSNLCPSCRNKVDRISKNHIVNNLVQVYLKDHPEKKRS------EEDLAELNKK 363
>gi|426247144|ref|XP_004017346.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 1 [Ovis aries]
Length = 663
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 77 PFGYDAQSFKIGP------LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLC 126
P +D ++ + P L+C+ICQ LL +C PC H +C AC S + + CP C
Sbjct: 283 PAAFDVRAEAMKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTC 342
Query: 127 GADIEKIEADTTLQDVVDRFIEGHARIKRS 156
+E+I + L ++V+ ++ H +RS
Sbjct: 343 RCPVERICKNHILNNLVEAYLLQHPDKRRS 372
>gi|157423476|gb|AAI53312.1| Si:dkey-69h6.7 protein [Danio rerio]
Length = 636
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL++C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 275 LTCIICQDLLYDCISVQPCMHTFCAACYSGWMERSSFCPTCRCPVERIRKNHILNNLVEA 334
Query: 146 FIEGH 150
++ H
Sbjct: 335 YLLQH 339
>gi|426247148|ref|XP_004017348.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 3 [Ovis aries]
Length = 651
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 77 PFGYDAQSFKIGP------LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLC 126
P +D ++ + P L+C+ICQ LL +C PC H +C AC S + + CP C
Sbjct: 271 PAAFDVRAEAMKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTC 330
Query: 127 GADIEKIEADTTLQDVVDRFIEGHARIKRS 156
+E+I + L ++V+ ++ H +RS
Sbjct: 331 RCPVERICKNHILNNLVEAYLLQHPDKRRS 360
>gi|153792019|ref|NP_001093485.1| E3 ubiquitin-protein ligase CHFR [Danio rerio]
gi|259585923|sp|A5WW08.1|CHFR_DANRE RecName: Full=E3 ubiquitin-protein ligase CHFR; AltName:
Full=Checkpoint with forkhead and RING finger domains
protein
Length = 637
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL++C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 275 LTCIICQDLLYDCISVQPCMHTFCAACYSGWMERSSFCPTCRCPVERIRKNHILNNLVEA 334
Query: 146 FIEGH 150
++ H
Sbjct: 335 YLLQH 339
>gi|440909757|gb|ELR59634.1| E3 ubiquitin-protein ligase CHFR [Bos grunniens mutus]
Length = 672
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 361
Query: 146 FIEGHARIKRS 156
++ H +RS
Sbjct: 362 YLLQHPDKRRS 372
>gi|329664522|ref|NP_001192403.1| E3 ubiquitin-protein ligase CHFR [Bos taurus]
gi|296478653|tpg|DAA20768.1| TPA: checkpoint with forkhead and ring finger domains [Bos taurus]
Length = 663
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 361
Query: 146 FIEGHARIKRS 156
++ H +RS
Sbjct: 362 YLLQHPDKRRS 372
>gi|426247146|ref|XP_004017347.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 2 [Ovis aries]
Length = 570
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 77 PFGYDAQSFKIGP------LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLC 126
P +D ++ + P L+C+ICQ LL +C PC H +C AC S + + CP C
Sbjct: 190 PAAFDVRAEAMKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTC 249
Query: 127 GADIEKIEADTTLQDVVDRFIEGHARIKRS 156
+E+I + L ++V+ ++ H +RS
Sbjct: 250 RCPVERICKNHILNNLVEAYLLQHPDKRRS 279
>gi|296478654|tpg|DAA20769.1| TPA: checkpoint with forkhead and ring finger domains [Bos taurus]
Length = 651
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGHARIKRS 156
++ H +RS
Sbjct: 350 YLLQHPDKRRS 360
>gi|321455745|gb|EFX66870.1| hypothetical protein DAPPUDRAFT_302409 [Daphnia pulex]
Length = 919
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Query: 83 QSFKIGP-LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK----- 132
Q K+ P L+C++C E + C H +CK+CI R+ K CP+C + K
Sbjct: 8 QITKLNPHLTCLLCGGYYIEATTIIECLHSFCKSCIVRYLETNKFCPVCEVQVHKTKPLL 67
Query: 133 -IEADTTLQDVVDRFIEG 149
I +D TLQD+V + + G
Sbjct: 68 NIRSDQTLQDIVYKLVPG 85
>gi|156391205|ref|XP_001635659.1| predicted protein [Nematostella vectensis]
gi|156222755|gb|EDO43596.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 55.5 bits (132), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTLQD 141
C++C L + + C H +C+ CI R+ D CP+C A+I K I AD LQD
Sbjct: 16 CVLCGGYLVDATTIIECLHSFCRGCIVRYLDTSYRCPVCDAEIHKTRPLLNIRADNVLQD 75
Query: 142 VVDRFIEGHARIKRSH 157
+V + + G +RSH
Sbjct: 76 IVYKVVPGMYFGERSH 91
>gi|297263927|ref|XP_001083796.2| PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 2 [Macaca
mulatta]
Length = 663
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 301 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 360
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 361 YLTQHPDKSRS 371
>gi|380814586|gb|AFE79167.1| E3 ubiquitin-protein ligase CHFR isoform 1 [Macaca mulatta]
gi|384948160|gb|AFI37685.1| E3 ubiquitin-protein ligase CHFR isoform 1 [Macaca mulatta]
Length = 668
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 306 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 365
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 366 YLTQHPDKSRS 376
>gi|355564846|gb|EHH21346.1| hypothetical protein EGK_04384, partial [Macaca mulatta]
Length = 622
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 260 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 319
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 320 YLTQHPDKSRS 330
>gi|426374794|ref|XP_004054246.1| PREDICTED: E3 ubiquitin-protein ligase CHFR [Gorilla gorilla
gorilla]
Length = 712
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 346 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 405
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 406 YLIQHPDKSRS 416
>gi|324515215|gb|ADY46125.1| E3 ubiquitin-protein ligase CHFR [Ascaris suum]
Length = 230
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDR 145
L C+IC+ ++++C+ PC H +C CIS + CP+C D+ D T VV+
Sbjct: 110 LECLICKEIIYKCATICPCGHKFCAGCISLWMATNMTCPVCRRDVIAPIRDCTFDSVVEV 169
Query: 146 FIEGHARIKRSHTNSDKEE 164
++ + ++R TN D+E
Sbjct: 170 LLQNNPGMRR--TNEDREH 186
>gi|402888206|ref|XP_003907463.1| PREDICTED: E3 ubiquitin-protein ligase CHFR [Papio anubis]
Length = 572
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLTQHPDKSRS 280
>gi|57164149|ref|NP_001009258.1| E3 ubiquitin-protein ligase CHFR [Rattus norvegicus]
gi|56268938|gb|AAH87162.1| Checkpoint with forkhead and ring finger domains [Rattus
norvegicus]
gi|149063744|gb|EDM14067.1| checkpoint with forkhead and ring finger domains, isoform CRA_b
[Rattus norvegicus]
Length = 663
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 301 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 360
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 361 YLLQHPDKSRS 371
>gi|410047581|ref|XP_003314094.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CHFR
[Pan troglodytes]
Length = 624
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 262 LTCIICQDLLHDCVSLQPCMHTFCSACYSGWMERSSLCPTCRCPVERICKNHILNNLVEX 321
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 322 YLIQHPDKSRS 332
>gi|194214449|ref|XP_001493398.2| PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 1 [Equus
caballus]
Length = 661
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 300 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 359
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 360 YLLQHPDKSRS 370
>gi|432875775|ref|XP_004072901.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
CHFR-like [Oryzias latipes]
Length = 575
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC HV+C AC S + + CP C +E+I + L ++V+
Sbjct: 215 LTCVICQDLLHDCISLQPCMHVFCAACYSGWMERSSLCPTCRCPVERICKNHFLNNLVEA 274
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 275 YLTQHPEKCRS 285
>gi|239048862|ref|NP_001154817.1| E3 ubiquitin-protein ligase CHFR isoform 2 [Homo sapiens]
Length = 663
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 361
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 362 YLIQHPDKSRS 372
>gi|194385602|dbj|BAG65178.1| unnamed protein product [Homo sapiens]
Length = 663
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 361
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 362 YLIQHPDKSRS 372
>gi|239048792|ref|NP_001154816.1| E3 ubiquitin-protein ligase CHFR isoform 1 [Homo sapiens]
gi|41688511|sp|Q96EP1.2|CHFR_HUMAN RecName: Full=E3 ubiquitin-protein ligase CHFR; AltName:
Full=Checkpoint with forkhead and RING finger domains
protein; AltName: Full=RING finger protein 196
gi|9651170|gb|AAF91084.1|AF170724_1 cell cycle checkpoint protein CHFR [Homo sapiens]
Length = 664
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 361
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 362 YLIQHPDKSRS 372
>gi|403292260|ref|XP_003937171.1| PREDICTED: E3 ubiquitin-protein ligase CHFR [Saimiri boliviensis
boliviensis]
Length = 700
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 338 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 397
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 398 YLIQHPDKSRS 408
>gi|148688094|gb|EDL20041.1| checkpoint with forkhead and ring finger domains, isoform CRA_d
[Mus musculus]
Length = 678
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 315 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 374
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 375 YLIQHPDKSRS 385
>gi|348550700|ref|XP_003461169.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like isoform 1 [Cavia
porcellus]
Length = 662
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 300 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 359
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 360 YLIQHPDKSRS 370
>gi|338727737|ref|XP_003365547.1| PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 2 [Equus
caballus]
Length = 649
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 288 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 347
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 348 YLLQHPDKSRS 358
>gi|345791280|ref|XP_534631.3| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 1 [Canis lupus
familiaris]
Length = 661
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 300 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTWCPTCRCPVERICKNHILNNLVEA 359
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 360 YLLQHPDKSRS 370
>gi|260815992|ref|XP_002602756.1| hypothetical protein BRAFLDRAFT_93702 [Branchiostoma floridae]
gi|229288068|gb|EEN58768.1| hypothetical protein BRAFLDRAFT_93702 [Branchiostoma floridae]
Length = 1562
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG+ R +GD AV+Y+ S++ MKL + + H ++ SLN IGD
Sbjct: 775 IAGSLNNLGNAWRNLGDHRKAVSYYEQSLQ--MKLSIYGEDTAHPDIAGSLNNIGDTWSN 832
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVL---DVAVSLAKVADVDRSIGNEDVAVD 345
GD + A SYY +SL ++R + ++ + D+A SL + + R++G+ AV
Sbjct: 833 LGDHRKAISYYEQSLQMKRSIYEMKRSIYGEDTAHPDIAASLNNMGNAWRNLGDHRKAVS 892
Query: 346 GFQEAIKRLESL 357
+++A++ S+
Sbjct: 893 YYEQALQMKRSI 904
Score = 42.7 bits (99), Expect = 0.30, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L +G+ R +GD AV+Y+ +++ MK + + H ++ SLN +GD
Sbjct: 870 IAASLNNMGNAWRNLGDHRKAVSYYEQALQ--MKRSIYGEDTAHPDIADSLNNMGDAWSN 927
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVL---DVAVSLAKVADVDRSIGNEDVAVD 345
GD + A SYY ++L + R + ++ + D+A SL + ++G+ A+
Sbjct: 928 LGDNRKAISYYEQALEMNRSIYEMRRSIYGEDTAHPDIASSLNNLGGAWTNLGDHRKAIS 987
Query: 346 GFQEAIKRLESL 357
+++A++ S+
Sbjct: 988 YYEQALEMRRSI 999
Score = 42.4 bits (98), Expect = 0.45, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG +GD A++Y+ ++E M+ + + H ++ SLN +G+
Sbjct: 965 IASSLNNLGGAWTNLGDHRKAISYYEQALE--MRRSIYGEDTAHPNIAASLNNLGNAWSD 1022
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L +RR + P D+A SL + ++G+ A+ ++
Sbjct: 1023 LGDNRKAISYYEQALEMRRSIYGEDTAHP----DIASSLNNLGGAWTNLGDHRKAISYYE 1078
Query: 349 EAIKRLESL 357
+A++ S+
Sbjct: 1079 QALEMRRSI 1087
Score = 41.2 bits (95), Expect = 0.78, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD A++Y+ S++ + + +D H ++ SLN +G GD
Sbjct: 691 LNNLGATWSNLGDNRKAISYYEQSLQMMRSVYGEDTA--HPDIADSLNNLGGAWRNLGDH 748
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY ++L ++R + P D+A SL + + R++G+ AV ++++++
Sbjct: 749 RKAISYYEQALEMKRGIYGEDNAHP----DIAGSLNNLGNAWRNLGDHRKAVSYYEQSLQ 804
Query: 353 RLESL----TLKPEEAG 365
S+ T P+ AG
Sbjct: 805 MKLSIYGEDTAHPDIAG 821
>gi|41688490|sp|Q810L3.1|CHFR_MOUSE RecName: Full=E3 ubiquitin-protein ligase CHFR; AltName:
Full=Checkpoint with forkhead and RING finger domains
protein
gi|29437111|gb|AAH49792.1| Checkpoint with forkhead and ring finger domains [Mus musculus]
Length = 664
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 301 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 360
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 361 YLIQHPDKSRS 371
>gi|188497681|ref|NP_766305.2| E3 ubiquitin-protein ligase CHFR [Mus musculus]
gi|74141791|dbj|BAE40969.1| unnamed protein product [Mus musculus]
gi|74199287|dbj|BAE33172.1| unnamed protein product [Mus musculus]
gi|74207053|dbj|BAE33309.1| unnamed protein product [Mus musculus]
gi|148688093|gb|EDL20040.1| checkpoint with forkhead and ring finger domains, isoform CRA_c
[Mus musculus]
Length = 663
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 301 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 360
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 361 YLIQHPDKSRS 371
>gi|326929543|ref|XP_003210922.1| PREDICTED: e3 ubiquitin-protein ligase CHFR-like [Meleagris
gallopavo]
Length = 679
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 81 DAQSFKIGP------LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
DA++ + P L+C+ICQ LL +C PC H +C AC S + + CP C +
Sbjct: 302 DAKTSNVKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPV 361
Query: 131 EKIEADTTLQDVVDRFIEGH 150
E+I + L ++V+ ++ H
Sbjct: 362 ERICKNHILNNLVEAYLIQH 381
>gi|348550702|ref|XP_003461170.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like isoform 2 [Cavia
porcellus]
Length = 651
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 288 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 347
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 348 YLIQHPDKSRS 358
>gi|74180324|dbj|BAE32331.1| unnamed protein product [Mus musculus]
Length = 664
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 301 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 360
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 361 YLIQHPDKSRS 371
>gi|15082330|gb|AAH12072.1| CHFR protein [Homo sapiens]
gi|123982834|gb|ABM83158.1| checkpoint with forkhead and ring finger domains [synthetic
construct]
gi|123997515|gb|ABM86359.1| checkpoint with forkhead and ring finger domains [synthetic
construct]
Length = 652
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 350 YLIQHPDKSRS 360
>gi|239048905|ref|NP_001154818.1| E3 ubiquitin-protein ligase CHFR isoform 3 [Homo sapiens]
gi|14042553|dbj|BAB55297.1| unnamed protein product [Homo sapiens]
Length = 652
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 350 YLIQHPDKSRS 360
>gi|45361599|ref|NP_989378.1| E3 ubiquitin-protein ligase CHFR [Xenopus (Silurana) tropicalis]
gi|82202338|sp|Q6P256.1|CHFR_XENTR RecName: Full=E3 ubiquitin-protein ligase CHFR; AltName:
Full=Checkpoint with forkhead and RING finger domains
protein
gi|40353026|gb|AAH64721.1| checkpoint with forkhead and ring finger domains [Xenopus
(Silurana) tropicalis]
Length = 626
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 265 LTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 324
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 325 YLIQHPEKCRS 335
>gi|410249240|gb|JAA12587.1| checkpoint with forkhead and ring finger domains [Pan troglodytes]
Length = 651
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 350 YLIQHPDKSRS 360
>gi|345791282|ref|XP_003433477.1| PREDICTED: E3 ubiquitin-protein ligase CHFR [Canis lupus
familiaris]
Length = 649
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 288 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTWCPTCRCPVERICKNHILNNLVEA 347
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 348 YLLQHPDKSRS 358
>gi|26346522|dbj|BAC36912.1| unnamed protein product [Mus musculus]
Length = 663
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 301 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 360
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 361 YLIQHPDKSRS 371
>gi|410291254|gb|JAA24227.1| checkpoint with forkhead and ring finger domains [Pan troglodytes]
Length = 651
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 350 YLIQHPDKSRS 360
>gi|194043570|ref|XP_001928490.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 1 [Sus scrofa]
Length = 660
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 299 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTLCPTCRCPVERICKNHILNNLVEA 358
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 359 YLLQHPDKGRS 369
>gi|149063743|gb|EDM14066.1| checkpoint with forkhead and ring finger domains, isoform CRA_a
[Rattus norvegicus]
Length = 624
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 262 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 321
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 322 YLLQHPDKSRS 332
>gi|355678775|gb|AER96212.1| checkpoint with forkhead and ring finger domains [Mustela putorius
furo]
Length = 603
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 256 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTLCPTCRCPVERICKNHILNNLVEA 315
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 316 YLLQHPDKSRS 326
>gi|410207146|gb|JAA00792.1| checkpoint with forkhead and ring finger domains [Pan troglodytes]
gi|410348330|gb|JAA40769.1| checkpoint with forkhead and ring finger domains [Pan troglodytes]
Length = 652
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 350 YLIQHPDKSRS 360
>gi|395840170|ref|XP_003792938.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 1 [Otolemur
garnettii]
Length = 661
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 299 LTCVICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 358
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 359 YLIQHPDKSRS 369
>gi|395840174|ref|XP_003792940.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 3 [Otolemur
garnettii]
Length = 649
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 287 LTCVICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 346
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 347 YLIQHPDKSRS 357
>gi|301775607|ref|XP_002923224.1| PREDICTED: e3 ubiquitin-protein ligase CHFR-like [Ailuropoda
melanoleuca]
Length = 629
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 268 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTLCPTCRCPVERICKNHILNNLVEA 327
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 328 YLLQHPDKSRS 338
>gi|149063746|gb|EDM14069.1| checkpoint with forkhead and ring finger domains, isoform CRA_d
[Rattus norvegicus]
Length = 591
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 229 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 288
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 289 YLLQHPDKSRS 299
>gi|338727739|ref|XP_003365548.1| PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 3 [Equus
caballus]
Length = 571
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLLQHPDKSRS 280
>gi|239048907|ref|NP_060693.2| E3 ubiquitin-protein ligase CHFR isoform 4 [Homo sapiens]
Length = 623
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 261 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 320
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 321 YLIQHPDKSRS 331
>gi|7023051|dbj|BAA91817.1| unnamed protein product [Homo sapiens]
Length = 623
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 261 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 320
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 321 YLIQHPDKSRS 331
>gi|239048909|ref|NP_001154819.1| E3 ubiquitin-protein ligase CHFR isoform 5 [Homo sapiens]
Length = 572
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLIQHPDKSRS 280
>gi|194380444|dbj|BAG63989.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLIQHPDKSRS 280
>gi|395840172|ref|XP_003792939.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 2 [Otolemur
garnettii]
Length = 572
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCVICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLIQHPDKSRS 280
>gi|363739898|ref|XP_415086.3| PREDICTED: E3 ubiquitin-protein ligase CHFR [Gallus gallus]
Length = 606
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 81 DAQSFKIGP------LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
DA++ + P L+C+ICQ LL +C PC H +C AC S + + CP C +
Sbjct: 229 DAKTSNVKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPV 288
Query: 131 EKIEADTTLQDVVDRFIEGH 150
E+I + L ++V+ ++ H
Sbjct: 289 ERICKNHILNNLVEAYLIQH 308
>gi|148688092|gb|EDL20039.1| checkpoint with forkhead and ring finger domains, isoform CRA_b
[Mus musculus]
Length = 591
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 229 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 288
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 289 YLIQHPDKSRS 299
>gi|119575200|gb|EAW54813.1| checkpoint with forkhead and ring finger domains, isoform CRA_e
[Homo sapiens]
Length = 466
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 361
Query: 146 FIEGH 150
++ H
Sbjct: 362 YLIQH 366
>gi|344299279|ref|XP_003421314.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 1 [Loxodonta
africana]
Length = 659
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 298 LTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCLVERICKNHMLNNLVEA 357
Query: 146 FIEGHARIKRS 156
++ H R+
Sbjct: 358 YLTQHPDKGRT 368
>gi|327283207|ref|XP_003226333.1| PREDICTED: e3 ubiquitin-protein ligase CHFR-like [Anolis
carolinensis]
Length = 637
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 279 LTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 338
Query: 146 FIEGH 150
++ H
Sbjct: 339 YLTQH 343
>gi|291412533|ref|XP_002722530.1| PREDICTED: checkpoint with forkhead and ring finger domains isoform
1 [Oryctolagus cuniculus]
Length = 661
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 300 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 359
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 360 YLIQHPDKSRS 370
>gi|197097922|ref|NP_001124696.1| E3 ubiquitin-protein ligase CHFR [Pongo abelii]
gi|75062044|sp|Q5RF77.1|CHFR_PONAB RecName: Full=E3 ubiquitin-protein ligase CHFR; AltName:
Full=Checkpoint with forkhead and RING finger domains
protein
gi|55725432|emb|CAH89580.1| hypothetical protein [Pongo abelii]
Length = 571
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLIQHPDKSRS 280
>gi|119575196|gb|EAW54809.1| checkpoint with forkhead and ring finger domains, isoform CRA_a
[Homo sapiens]
Length = 454
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGH 150
++ H
Sbjct: 350 YLIQH 354
>gi|74139647|dbj|BAE40960.1| unnamed protein product [Mus musculus]
Length = 524
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 161 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 220
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 221 YLIQHPDKSRS 231
>gi|321450351|gb|EFX62403.1| hypothetical protein DAPPUDRAFT_8025 [Daphnia pulex]
Length = 86
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Query: 83 QSFKIGP-LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK----- 132
Q K+ P L+C++C E + C H +CK+CI R+ K CP+C + K
Sbjct: 8 QITKLNPHLTCLLCGGYYIEATTIIECLHSFCKSCIVRYLETNKFCPVCEVQVHKTKPLL 67
Query: 133 -IEADTTLQDVVDRFIEG 149
I +D TLQD+V + + G
Sbjct: 68 NIRSDQTLQDIVYKLVPG 85
>gi|444726159|gb|ELW66699.1| putative E3 ubiquitin-protein ligase HECTD2 [Tupaia chinensis]
Length = 653
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG---HARIKRSHTNSDKEEDEAGENK 171
++++ + + G H +K + D+E DE ++K
Sbjct: 76 EEIIFKLVPGLREHDTLKVDKSKVDEEGDENQDDK 110
>gi|348550704|ref|XP_003461171.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like isoform 3 [Cavia
porcellus]
Length = 573
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLIQHPDKSRS 280
>gi|148688090|gb|EDL20037.1| checkpoint with forkhead and ring finger domains, isoform CRA_a
[Mus musculus]
gi|148688091|gb|EDL20038.1| checkpoint with forkhead and ring finger domains, isoform CRA_a
[Mus musculus]
Length = 523
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 161 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 220
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 221 YLIQHPDKSRS 231
>gi|291412535|ref|XP_002722531.1| PREDICTED: checkpoint with forkhead and ring finger domains isoform
2 [Oryctolagus cuniculus]
Length = 649
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 288 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 347
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 348 YLIQHPDKSRS 358
>gi|149063745|gb|EDM14068.1| checkpoint with forkhead and ring finger domains, isoform CRA_c
[Rattus norvegicus]
Length = 523
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 161 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 220
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 221 YLLQHPDKSRS 231
>gi|344299281|ref|XP_003421315.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 2 [Loxodonta
africana]
Length = 647
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 286 LTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCLVERICKNHMLNNLVEA 345
Query: 146 FIEGHARIKRS 156
++ H R+
Sbjct: 346 YLTQHPDKGRT 356
>gi|145518281|ref|XP_001445018.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412451|emb|CAK77621.1| unnamed protein product [Paramecium tetraurelia]
Length = 517
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDR 145
+ C IC L+F+C PC H +C AC S + K CP C D++ + ++ + +VV+R
Sbjct: 154 MHCPICDDLIFQCVSLVPCLHNFCGACFSDWMAKSKTCPSCRKDVQSVNKNSMVNNVVER 213
Query: 146 FI 147
++
Sbjct: 214 YL 215
>gi|345791284|ref|XP_856604.2| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 3 [Canis lupus
familiaris]
Length = 571
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTWCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLLQHPDKSRS 280
>gi|119575197|gb|EAW54810.1| checkpoint with forkhead and ring finger domains, isoform CRA_b
[Homo sapiens]
Length = 425
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 261 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 320
Query: 146 FIEGH 150
++ H
Sbjct: 321 YLIQH 325
>gi|432095069|gb|ELK26458.1| E3 ubiquitin-protein ligase CHFR [Myotis davidii]
Length = 670
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 286 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTLCPTCRCPVERICKNHILNNLVEA 345
Query: 146 FIEGH 150
++ H
Sbjct: 346 YLLQH 350
>gi|311270512|ref|XP_003132901.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 2 [Sus scrofa]
Length = 570
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 209 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTLCPTCRCPVERICKNHILNNLVEA 268
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 269 YLLQHPDKGRS 279
>gi|417411951|gb|JAA52394.1| Putative e3 ubiquitin-protein ligase chfr, partial [Desmodus
rotundus]
Length = 616
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 255 LTCCICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCLVERICKNHILNNLVEA 314
Query: 146 FIEGHARIKRS 156
++ H +RS
Sbjct: 315 YLLQHPDKRRS 325
>gi|224071807|ref|XP_002195103.1| PREDICTED: E3 ubiquitin-protein ligase CHFR [Taeniopygia guttata]
Length = 608
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 81 DAQSFKIGP------LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
DA++ + P L+C+ICQ LL +C PC H +C AC S + + CP C +
Sbjct: 231 DAKASNVKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPV 290
Query: 131 EKIEADTTLQDVVDRFIEGH 150
E+I + L ++V+ ++ H
Sbjct: 291 ERICKNHILNNLVEAYLIQH 310
>gi|354479128|ref|XP_003501765.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 1 [Cricetulus
griseus]
Length = 663
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 301 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 360
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 361 YLIQHPDKCRS 371
>gi|390468381|ref|XP_002753221.2| PREDICTED: E3 ubiquitin-protein ligase CHFR [Callithrix jacchus]
Length = 571
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 209 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 268
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 269 YLIQHPDKSRS 279
>gi|119575199|gb|EAW54812.1| checkpoint with forkhead and ring finger domains, isoform CRA_d
[Homo sapiens]
Length = 663
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 302 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 361
Query: 146 FIEGH 150
++ H
Sbjct: 362 YLIQH 366
>gi|351695795|gb|EHA98713.1| E3 ubiquitin-protein ligase CHFR [Heterocephalus glaber]
Length = 573
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 293 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 352
Query: 146 FIEGH 150
++ H
Sbjct: 353 YLIQH 357
>gi|345317569|ref|XP_003429897.1| PREDICTED: E3 ubiquitin-protein ligase CHFR [Ornithorhynchus
anatinus]
Length = 665
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 303 LTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 362
Query: 146 FIEGH 150
++ H
Sbjct: 363 YLIQH 367
>gi|119575202|gb|EAW54815.1| checkpoint with forkhead and ring finger domains, isoform CRA_g
[Homo sapiens]
Length = 369
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 205 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 264
Query: 146 FIEGH 150
++ H
Sbjct: 265 YLIQH 269
>gi|344299283|ref|XP_003421316.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 3 [Loxodonta
africana]
Length = 569
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 208 LTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCLVERICKNHMLNNLVEA 267
Query: 146 FIEGHARIKRS 156
++ H R+
Sbjct: 268 YLTQHPDKGRT 278
>gi|334326913|ref|XP_001378026.2| PREDICTED: e3 ubiquitin-protein ligase CHFR [Monodelphis domestica]
Length = 653
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGH 150
++ H
Sbjct: 350 YLIQH 354
>gi|291412537|ref|XP_002722532.1| PREDICTED: checkpoint with forkhead and ring finger domains isoform
3 [Oryctolagus cuniculus]
Length = 571
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSALCPTCRCPVERICKNHILNNLVEA 269
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 270 YLIQHPDKSRS 280
>gi|354479130|ref|XP_003501766.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 2 [Cricetulus
griseus]
Length = 652
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 289 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 348
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 349 YLIQHPDKCRS 359
>gi|119575198|gb|EAW54811.1| checkpoint with forkhead and ring finger domains, isoform CRA_c
[Homo sapiens]
Length = 651
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 349
Query: 146 FIEGH 150
++ H
Sbjct: 350 YLIQH 354
>gi|74190849|dbj|BAE28209.1| unnamed protein product [Mus musculus]
Length = 592
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS----RFKDCPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S R CP C +E+I + L ++V+
Sbjct: 229 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMVRSSLCPTCRCPVERICKNHILNNLVEA 288
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 289 YLIQHPDKSRS 299
>gi|193783598|dbj|BAG53509.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 102 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 161
Query: 146 FIEGHARIKRS 156
++ H RS
Sbjct: 162 YLIQHPDKSRS 172
>gi|148225863|ref|NP_001088007.1| polycomb complex protein BMI-1-B [Xenopus laevis]
gi|82198007|sp|Q640D5.1|BMI1B_XENLA RecName: Full=Polycomb complex protein BMI-1-B; AltName:
Full=Polycomb group RING finger protein 4-B
gi|52138943|gb|AAH82694.1| LOC494698 protein [Xenopus laevis]
Length = 323
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I AD TL
Sbjct: 16 LMCVLCGGYFIDAATIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRADKTL 75
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H + ++ +++ + A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKGEMKRRRDFYAAHPSVDAANGSNEDRGEVADEDKRIITDD 128
>gi|119575201|gb|EAW54814.1| checkpoint with forkhead and ring finger domains, isoform CRA_f
[Homo sapiens]
Length = 622
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 261 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 320
Query: 146 FIEGH 150
++ H
Sbjct: 321 YLIQH 325
>gi|431912085|gb|ELK14223.1| E3 ubiquitin-protein ligase CHFR [Pteropus alecto]
Length = 655
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 300 LTCVICQDLLHDCVSLQPCMHTFCAACYSGWMERSTLCPTCRCPVERICKNHILNNLVEA 359
Query: 146 FIEGH 150
++ H
Sbjct: 360 YLLQH 364
>gi|148224664|ref|NP_001084523.1| polycomb group ring finger 2 [Xenopus laevis]
gi|46250310|gb|AAH68725.1| MGC81178 protein [Xenopus laevis]
Length = 317
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 26/117 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + + K I +D TL
Sbjct: 16 LMCALCGGYFIDAATIVECLHSFCKTCILRYLEAHKFCPMCDSQVHKGRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG------------HARIKRSHTNSDKEE----DEAGENKKVIYEDVSM 180
QD+V + + G +A RS NS E+ E+GE E++S+
Sbjct: 76 QDIVYKLVPGLFRDEMKRRRDFYASYSRSKDNSSSEQGQKVSESGEAPVQQEENISL 132
>gi|62858263|ref|NP_001015995.1| BMI1 polycomb ring finger oncogene [Xenopus (Silurana) tropicalis]
gi|163916023|gb|AAI57201.1| hypothetical protein LOC548749 [Xenopus (Silurana) tropicalis]
Length = 325
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I AD TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRADKTL 75
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H S+ +++ + A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKGEMKRRRDFYAAHPSADASNGSNEDRGEVADEDKRIITDD 128
>gi|281340795|gb|EFB16379.1| hypothetical protein PANDA_012324 [Ailuropoda melanoleuca]
Length = 615
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 256 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSTLCPTCRCPVERICKNHILNNLVEA 315
Query: 146 FIEGH 150
++ H
Sbjct: 316 YLLQH 320
>gi|348512208|ref|XP_003443635.1| PREDICTED: polycomb complex protein BMI-1-like [Oreochromis
niloticus]
Length = 567
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 245 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTL 304
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H + TN D+ E A E+K++I +D
Sbjct: 305 QDIVYKLVPGLFKNEMKRRRDFYAEHPVDASNGTNEDRGE-VADEDKRIITDD 356
>gi|440799569|gb|ELR20613.1| zinc finger, domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 326
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI-----EKIEADTT 138
G L C +C +L + C H +CK+C+ ++ DCPLCG D+ E+I D T
Sbjct: 104 GFLVCQLCMGVLRDAHTIRECLHTFCKSCLYKYFQTTADCPLCGVDLRPNPFERIRFDRT 163
Query: 139 LQDVVDRFI 147
+Q +V++
Sbjct: 164 VQTIVNKIF 172
>gi|395539960|ref|XP_003771930.1| PREDICTED: uncharacterized protein LOC100928474 [Sarcophilus
harrisii]
Length = 802
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 492 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 551
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 552 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 604
>gi|344246338|gb|EGW02442.1| Zinc finger protein 605 [Cricetulus griseus]
Length = 769
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L+C+ICQ LL +C PC H +C AC S + + CP C +E+I + L ++V+
Sbjct: 606 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA 665
Query: 146 FIEGH 150
++ H
Sbjct: 666 YLIQH 670
>gi|355562340|gb|EHH18934.1| Polycomb group RING finger protein 4 [Macaca mulatta]
Length = 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 18/111 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSDKEEDEAGENKKVIYEDVSMER 182
QD+V + + G + +KR +H ++D+ + + ++K+ E+V+ +R
Sbjct: 76 QDIVYKLVPGLFKNEMKRRRDFYVAHPSADRLDRKVNKDKEKSKEEVNDKR 126
>gi|359320397|ref|XP_548155.4| PREDICTED: polycomb group RING finger protein 2 [Canis lupus
familiaris]
Length = 376
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 25/126 (19%)
Query: 35 KARPDDAASRKAVENS-AKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCM 93
+AR D R+A+ + +P H G+ ++ + + P L C
Sbjct: 6 RARLDAELGRQAMRVTLPRPPVPHPGNMHRTTRIKITELNPH--------------LMCA 51
Query: 94 ICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQDVV 143
+C + + C H +CK CI R+ K CP+C + K I +D TLQD+V
Sbjct: 52 LCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIV 111
Query: 144 DRFIEG 149
+ + G
Sbjct: 112 YKLVPG 117
>gi|156547031|ref|XP_001601096.1| PREDICTED: hypothetical protein LOC100116657 [Nasonia vitripennis]
Length = 1468
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C + + C H +CK+CI ++ K CP+C A + K I D TL
Sbjct: 18 LTCKLCGGYFIDATTIIECLHSFCKSCIVKYLESNKFCPVCDAQVHKNKPLSNIRPDQTL 77
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 78 QDIVYKLVPG 87
>gi|260786216|ref|XP_002588154.1| hypothetical protein BRAFLDRAFT_68792 [Branchiostoma floridae]
gi|229273313|gb|EEN44165.1| hypothetical protein BRAFLDRAFT_68792 [Branchiostoma floridae]
Length = 1109
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT----LSVSLNKIGDLKYYG 289
LG LG +GD AV+Y+ S++ + + D HT +++SL+ +G+ Y
Sbjct: 512 LGNLGGIWGDLGDHKKAVSYYEQSLQMMRSIYGD-----HTPHSDIAISLHNLGNAWNYL 566
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
G+ + A Y RSL + + ++ P D+A SL + + +++G+ A+ +++
Sbjct: 567 GNFRKAVFYNERSLQMMKSIYGENTTHP----DIAQSLTNMGNAKKAVGDYRNAIICYEQ 622
Query: 350 AIKRLESL----TLKPEEAG 365
+++ + S+ T PE AG
Sbjct: 623 SLQMMRSIYDETTAHPEIAG 642
>gi|82217516|sp|Q91648.1|BMI1A_XENLA RecName: Full=Polycomb complex protein BMI-1-A; AltName:
Full=Polycomb group RING finger protein 4-A
gi|1086577|gb|AAC59729.1| xbmi-1 [Xenopus laevis]
Length = 326
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I AD TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRADKTL 75
Query: 140 QDVVDRFIEG--HARIKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G +KR +H ++D ED A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKGEMKRRRDFYAAHPSADVANGSNEDRGEVADEDKRIITDD 128
>gi|148226666|ref|NP_001081790.1| polycomb complex protein BMI-1-A [Xenopus laevis]
gi|49115061|gb|AAH72892.1| Xbmi-1 protein [Xenopus laevis]
Length = 326
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I AD TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRADKTL 75
Query: 140 QDVVDRFIEG--HARIKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G +KR +H ++D ED A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKGEMKRRRDFYAAHPSADVANGSNEDRGEVADEDKRIITDD 128
>gi|260826351|ref|XP_002608129.1| hypothetical protein BRAFLDRAFT_91392 [Branchiostoma floridae]
gi|229293479|gb|EEN64139.1| hypothetical protein BRAFLDRAFT_91392 [Branchiostoma floridae]
Length = 1623
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG+ R +GD A++Y+ S++ MK + + +H ++ SLN +G +
Sbjct: 1233 IAAFLNNLGNAVRDLGDNRKAISYYEQSLQ--MKRSIYGEDNVHPDIADSLNNLGTVWGD 1290
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL ++R + P D+ SL + ++ R +G+ AV ++
Sbjct: 1291 LGDQRRAISYYEQSLQMKRIIYGEGTVHP----DIVTSLNNLGNIWRDLGDHRKAVSYYE 1346
Query: 349 EAIKRLESL----TLKPEEAG 365
+A+ S+ T P+ AG
Sbjct: 1347 QALHMKRSIYGEGTAHPDIAG 1367
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LGD C+ +GD A++Y+ +++ + + + I H ++ +LN +G
Sbjct: 1145 IAASLKNLGDACKILGDRRKAISYYGQALQMMRSIYGEG--IAHPNIAATLNSLGAAWSD 1202
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL + + P D+A L + + R +G+ A+ ++
Sbjct: 1203 LGDYRKALSYYEQSLQMDCSIYGEGTAHP----DIAAFLNNLGNAVRDLGDNRKAISYYE 1258
Query: 349 EAIKRLESL 357
++++ S+
Sbjct: 1259 QSLQMKRSI 1267
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +L LG +GD AV+Y+ S++ M+ + D + H ++ SLN +G
Sbjct: 1497 IAGILNNLGAAWSNLGDYRKAVSYYEHSLQ--MRRSIYDEDNAHPDIAASLNNLGFTWSE 1554
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL +RR ++ P D+ SL + R +G+ + A++ FQ
Sbjct: 1555 LGDHRKAISYHEQSLQMRRSIYGENTAHP----DIVQSLKNLCCAWRGLGDYEKAMNYFQ 1610
>gi|390352349|ref|XP_783799.2| PREDICTED: polycomb group RING finger protein 2-like
[Strongylocentrotus purpuratus]
Length = 479
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 27/115 (23%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C+ + + + C H +C++CI R+ K CP+C + K I +D TL
Sbjct: 16 LTCSLCKGYIVDATSIIECLHSFCRSCIVRYLHTSKQCPVCDTQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFI----EGHARIKR----SH---------TNSDKEEDEAGENKKVIYED 177
Q++V + + +G + +R SH T S +E E E + +IY D
Sbjct: 76 QNLVYKLVPSMFKGEMKRRREFYKSHPQASTSLAQTVSREERGEMDEQELIIYTD 130
>gi|194337882|ref|YP_002019676.1| SEFIR domain-containing protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310359|gb|ACF45059.1| SEFIR domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 1611
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD RA+G + A F ++E +L D + LSVS NK+GDL G +
Sbjct: 1037 MGDLYRALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYRALGQGE 1096
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR ++++L + + + + D++VS K+ D+ R++G + A D F +A++
Sbjct: 1097 QARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYRALGQGEQARDAFLKALEI 1156
Query: 354 LESLTLKPEEAGLEQRRLSV 373
+ L + QR LSV
Sbjct: 1157 AKRLAQSEPDRADYQRDLSV 1176
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD RA+G + A F ++E +L D + LSVS NK+GDL G +
Sbjct: 1085 MGDLYRALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYRALGQGE 1144
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR ++++L + + + + D++VS ++ D+ R++G + A D F +A++
Sbjct: 1145 QARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYRALGQGEQARDAFLKALEI 1204
Query: 354 LESLTLKPEEAGLEQRRLSV 373
+ L + QR LSV
Sbjct: 1205 AKRLAQSEPDRADYQRDLSV 1224
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD RA+G + A F +++ +L D + LSVS NK+GDL G +
Sbjct: 1373 MGDLYRALGQGEQARDAFLKALDIRQRLAQSEPDRADYQRDLSVSYNKMGDLYSALGQGE 1432
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR ++++L + + + + D++VS ++ D+ R++G + A D F +A++
Sbjct: 1433 QARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYRALGQGEQARDAFLKALEI 1492
Query: 354 LESLTLKPEEAGLEQRRLSV 373
+ L + QR LSV
Sbjct: 1493 AKRLAQSEPDRADYQRDLSV 1512
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD A+G + A F +E +L D + LSVS NK+GDL G +
Sbjct: 1325 MGDLYSALGQGEQARDAFLKDLEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYRALGQGE 1384
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR ++++L++R+ + + D++VS K+ D+ ++G + A D F +A++
Sbjct: 1385 QARDAFLKALDIRQRLAQSEPDRADYQRDLSVSYNKMGDLYSALGQGEQARDAFLKALEI 1444
Query: 354 LESLTLKPEEAGLEQRRLSV 373
+ L + QR LSV
Sbjct: 1445 AKRLAQSEPDRADYQRDLSV 1464
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD RA+G + A F ++E +L D + LSVS ++GDL G +
Sbjct: 1181 MGDLYRALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYSALGQGE 1240
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR +++ L + + + + D++VS K+ D+ R++G + A D F +A+
Sbjct: 1241 QARDAFLKDLEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYRALGQGEQARDAFLKALDI 1300
Query: 354 LESLTLKPEEAGLEQRRLSV 373
+ L + QR LSV
Sbjct: 1301 RQRLAQSEPDRADYQRDLSV 1320
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD A+G + A F +E +L D + LSVS NK+GDL G +
Sbjct: 1229 MGDLYSALGQGEQARDAFLKDLEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYRALGQGE 1288
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR ++++L++R+ + + D++VS K+ D+ ++G + A D F + ++
Sbjct: 1289 QARDAFLKALDIRQRLAQSEPDRADYQRDLSVSYNKMGDLYSALGQGEQARDAFLKDLEI 1348
Query: 354 LESLTLKPEEAGLEQRRLSV 373
+ L + QR LSV
Sbjct: 1349 AKRLAQSEPDRADYQRDLSV 1368
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD RA+G + A F ++E +L D + LSVS NK+GDL G +
Sbjct: 1469 MGDLYRALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYSALGQGE 1528
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR ++++L++R+ + + D+AVSL A S E + + A+
Sbjct: 1529 QARDAFLKALDIRQRLAQSEPDRADYQRDLAVSLVLFAKAHDSAEKEHL-----KRALSI 1583
Query: 354 LESLT 358
LESL
Sbjct: 1584 LESLN 1588
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
LSVS NK+GDL G + AR ++++L + + + + D++VS K+ D+
Sbjct: 1030 LSVSYNKMGDLYRALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYNKMGDLY 1089
Query: 335 RSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSV 373
R++G + A D F +A++ + L + QR LSV
Sbjct: 1090 RALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSV 1128
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD RA+G + A F ++E +L D + LSVS ++GDL G +
Sbjct: 1133 MGDLYRALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYRALGQGE 1192
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR ++++L + + + + D++VS ++ D+ ++G + A D F + ++
Sbjct: 1193 QARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYSALGQGEQARDAFLKDLEI 1252
Query: 354 LESLTLKPEEAGLEQRRLSV 373
+ L + QR LSV
Sbjct: 1253 AKRLAQSEPDRADYQRDLSV 1272
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD A+G + A F ++E +L D + LSVS ++GDL G +
Sbjct: 1421 MGDLYSALGQGEQARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYERMGDLYRALGQGE 1480
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR ++++L + + + + D++VS K+ D+ ++G + A D F +A+
Sbjct: 1481 QARDAFLKALEIAKRLAQSEPDRADYQRDLSVSYNKMGDLYSALGQGEQARDAFLKALDI 1540
Query: 354 LESLTLKPEEAGLEQRRLSV 373
+ L + QR L+V
Sbjct: 1541 RQRLAQSEPDRADYQRDLAV 1560
>gi|198422095|ref|XP_002129149.1| PREDICTED: similar to polycomb group ring finger 1 [Ciona
intestinalis]
Length = 321
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR----FKDCPLCGADIEK------IEADTTL 139
+SC IC L + + T C H +CK+CI++ + CP+C ++ ++AD L
Sbjct: 127 ISCKICCGYLVDATTITECLHSFCKSCITKHLAVYLTCPICDVKLQNANIYSSVKADIVL 186
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIY 175
QD+VD+ + G ++ + + ++ K+IY
Sbjct: 187 QDIVDKLLPGIQTMENRNFLEFHKNPDSDLQTKLIY 222
>gi|443726379|gb|ELU13559.1| hypothetical protein CAPTEDRAFT_218257 [Capitella teleta]
Length = 540
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS----RFKDCPLCGADIEKIEADTTLQDVVDR 145
L C ICQ LL C PC H +C C S R K+CP C ++++ + + ++V+
Sbjct: 223 LICCICQELLHNCISLQPCMHSFCAGCYSEWMQRSKECPTCRLTVDRVNKNHIVNNLVEA 282
Query: 146 FIEGHARIKR 155
++ H KR
Sbjct: 283 YLASHPDKKR 292
>gi|354474513|ref|XP_003499475.1| PREDICTED: polycomb complex protein BMI-1-like [Cricetulus griseus]
Length = 523
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 215 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 274
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 275 QDIVYKLVPG 284
>gi|196002751|ref|XP_002111243.1| hypothetical protein TRIADDRAFT_54995 [Trichoplax adhaerens]
gi|190587194|gb|EDV27247.1| hypothetical protein TRIADDRAFT_54995 [Trichoplax adhaerens]
Length = 169
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 86 KIGP-LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IE 134
+I P + C +CQ L + + T C H +C++CI + D CPLC + + I
Sbjct: 11 QINPHVICYLCQGYLIDATTITECLHSFCRSCIVKHFDKSLLCPLCNLRVHETRPHLNIR 70
Query: 135 ADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
+DTTLQ++V + G + S+ + + + E + + E++S
Sbjct: 71 SDTTLQEIVYGLVPGLLKELLSNNLNKRRQSEDSQRTCITLENIS 115
>gi|48145939|emb|CAG33192.1| COMMD3 [Homo sapiens]
Length = 326
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H ++ +S+ + A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSSEDRGEVADEDKRIITDD 128
>gi|395849213|ref|XP_003797227.1| PREDICTED: E3 ubiquitin-protein ligase RNF135 [Otolemur garnettii]
Length = 428
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF------KDCPLC---GADIEKIEADTTLQ 140
L C+IC LL +C PC H +C++C+ R +DCP C A +++ +T LQ
Sbjct: 19 LGCIICHGLL-DCPTTLPCGHSFCRSCLKRLWTARRHRDCPTCREGAAQQPRLQKNTLLQ 77
Query: 141 DVVDRF 146
++VD++
Sbjct: 78 ELVDKY 83
>gi|156391209|ref|XP_001635661.1| predicted protein [Nematostella vectensis]
gi|156391213|ref|XP_001635663.1| predicted protein [Nematostella vectensis]
gi|156222757|gb|EDO43598.1| predicted protein [Nematostella vectensis]
gi|156222759|gb|EDO43600.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTLQD 141
C++C L + + C H +C+ CI R+ + CP+C A+I K I AD LQD
Sbjct: 16 CVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVCDAEIHKTRPLLNIRADNVLQD 75
Query: 142 VVDRFIEGHARIKRSH 157
+V + + G ++SH
Sbjct: 76 IVYKVVPGMYFGEKSH 91
>gi|426240771|ref|XP_004014267.1| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Ovis
aries]
Length = 469
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|346468437|gb|AEO34063.1| hypothetical protein [Amblyomma maculatum]
Length = 552
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C++C + + C H +CK CI ++ K CP+C + K I +D TL
Sbjct: 16 LTCVLCGGYFVDATTIIECLHSFCKTCIVKYLEVHKMCPVCDVQVHKTRPLQNIRSDQTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|147906248|ref|NP_001084738.1| uncharacterized protein LOC414708 [Xenopus laevis]
gi|46329615|gb|AAH68930.1| MGC83173 protein [Xenopus laevis]
Length = 317
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 19/100 (19%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + + K I +D TL
Sbjct: 16 LMCALCGGYFIDAATIVECLHSFCKTCILRYLEAHKFCPMCDSQVHKGRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEGHAR--IKR------SHTNS-DKEEDEAGEN 170
QD+V + + G R +KR S+ S D+ E G+N
Sbjct: 76 QDIVYKLVPGLFRGEMKRRRDFYASYWRSKDRSSTEQGQN 115
>gi|407686828|ref|YP_006802001.1| hypothetical protein AMBAS45_05210 [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407290208|gb|AFT94520.1| hypothetical protein AMBAS45_05210 [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 638
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHTLS 276
+GN S LG + +GD MG+ A+ + +++ KL +D ++ L+
Sbjct: 227 LGNNSLNSRHLGTIHNEMGDLYVTMGNLPEALISYENALRIRKKLVTNDSSNFKLKRDLA 286
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPS---QVLDVAVSLAKVADV 333
VS +K G ++ G+L AA Y ++ + V+ N PS D++VS +A++
Sbjct: 287 VSYDKFGHIELAQGNLPAALKAYQQAWTIAHTLVE---NTPSNHEWQRDLSVSFDNIANI 343
Query: 334 DRSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSV 373
+R GN A+ +++A+ +SLT E QR L V
Sbjct: 344 ERLRGNYFSALISYKQALDIRKSLTDAFPENSSRQRDLLV 383
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 222 NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHTLSVS 278
N SE L +G G D ++ ++ +++ L +L D E S+S
Sbjct: 469 NNSEWQRDLSVAFNNIGLVKLTEGSLDESLTFYREALSILEELVTRDPANNEWKRYYSIS 528
Query: 279 LNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIG 338
IGD++ G+ AA + R+L +R D R + D+AVS K+ D+ R++G
Sbjct: 529 QMNIGDIELKKGNYAAALQLFDRALAIRIDLTDRIPSNREWRNDLAVSFHKIGDLYRAMG 588
Query: 339 NEDVAVDGFQEAIKRLESL 357
A+ +++++ L L
Sbjct: 589 QISNALLNYEKSLSLLGQL 607
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 225 ELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHTLSVSLNK 281
E L A +G R+ GD DAA + ++ L +D E LSV+ N
Sbjct: 424 EWNRDLAASFSNIGHIKRSQGDLDAAHESYNQALSITRALAYNDPNNSEWQRDLSVAFNN 483
Query: 282 IGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNED 341
IG +K G L + ++Y +L++ + V R ++S + D++ GN
Sbjct: 484 IGLVKLTEGSLDESLTFYREALSILEELVTRDPANNEWKRYYSISQMNIGDIELKKGNYA 543
Query: 342 VAVDGFQEAI 351
A+ F A+
Sbjct: 544 AALQLFDRAL 553
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
L VS +KIG ++ GD + S Y + L + + V R + D+A S + + +
Sbjct: 381 LLVSYDKIGHIERLLGDFSNSLSAYTKVLKIAQALVARDPSNREWNRDLAASFSNIGHIK 440
Query: 335 RSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSV 373
RS G+ D A + + +A+ +L QR LSV
Sbjct: 441 RSQGDLDAAHESYNQALSITRALAYNDPNNSEWQRDLSV 479
>gi|260835558|ref|XP_002612775.1| hypothetical protein BRAFLDRAFT_97244 [Branchiostoma floridae]
gi|229298155|gb|EEN68784.1| hypothetical protein BRAFLDRAFT_97244 [Branchiostoma floridae]
Length = 1293
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 197 QNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLG-------------MLGDCCRA 243
N+ S + LCT ++ DQ E + + + A+ G +G+C
Sbjct: 881 HNIASLLGNIGLCTSELGDQSEALVYLEQKLKMMKAIYGETTAHPAIAGSLNNIGNCWSK 940
Query: 244 MGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRS 302
+GD A+ Y+ S++ M+ + H ++ SLN IG GD + A YY +S
Sbjct: 941 LGDKRKAIRYYEQSMK--MRKAISGETTAHPDITASLNNIGKCWSDLGDQRKAIRYYEQS 998
Query: 303 LNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
L +R+ + P D+A SL + + +G++ A+ F++++K
Sbjct: 999 LKMRKIIYGETTAHP----DIASSLNNIGNCWGELGDQRKAIRYFEQSLK 1044
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L +G C R +GD A+ YF S++ + K + ++ SLN IG +
Sbjct: 1147 IAASLNNIGACWRDLGDKRKAIRYFEQSLK-MWKAVYGETTAHPYIAASLNNIGLC--WS 1203
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A Y+ +SL + +D + P DVA SL + +GN+ +A+ +++
Sbjct: 1204 GDNRNAIWYHEQSLKMMKDVYGETTAHP----DVAASLNNIGACLNELGNQRIALSYYEQ 1259
Query: 350 AIKRLESL 357
++K ++++
Sbjct: 1260 SVKMMKAI 1267
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 224 SELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIG 283
S + + ++LG +G C +GD A+ Y ++ +MK + ++ SLN IG
Sbjct: 877 SHVHHNIASLLGNIGLCTSELGDQSEALVYLEQKLK-MMKAIYGETTAHPAIAGSLNNIG 935
Query: 284 DLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVA 343
+ GD + A YY +S+ +R+ + P D+ SL + +G++ A
Sbjct: 936 NCWSKLGDKRKAIRYYEQSMKMRKAISGETTAHP----DITASLNNIGKCWSDLGDQRKA 991
Query: 344 VDGFQEAIK 352
+ +++++K
Sbjct: 992 IRYYEQSLK 1000
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L +G+C + +GD A+ Y S++ M+ + H ++ SLN IG Y
Sbjct: 1059 IASSLNNIGNCWKNLGDQTKAIRYHEQSLK--MRKALYGETTAHPDIAESLNNIGSCWYD 1116
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
G + A YY +SL + + + P D+A SL + R +G++ A+ F+
Sbjct: 1117 LGYQRKAIRYYEQSLKMEKAIYGETTAHP----DIAASLNNIGACWRDLGDKRKAIRYFE 1172
Query: 349 EAIKRLESL 357
+++K +++
Sbjct: 1173 QSLKMWKAV 1181
>gi|403278207|ref|XP_003945245.1| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
[Saimiri boliviensis boliviensis]
Length = 469
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|363743503|ref|XP_003642857.1| PREDICTED: polycomb group RING finger protein 2-like [Gallus
gallus]
Length = 321
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C A + K I +D TL
Sbjct: 16 LMCALCGGYFIDAATIVECLHSFCKTCIVRYLEANKYCPMCDAQVHKTRPLLSIRSDRTL 75
Query: 140 QDVVDRFIEG 149
QDVV + + G
Sbjct: 76 QDVVYKLVPG 85
>gi|441625691|ref|XP_003257751.2| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
isoform 2 [Nomascus leucogenys]
Length = 469
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|444731073|gb|ELW71439.1| Polycomb complex protein BMI-1 [Tupaia chinensis]
Length = 383
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 106 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 165
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 166 QDIVYKLVPG 175
>gi|348556239|ref|XP_003463930.1| PREDICTED: polycomb complex protein BMI-1-like [Cavia porcellus]
Length = 469
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 219 QDIVYKLVPG 228
>gi|395827235|ref|XP_003786810.1| PREDICTED: polycomb complex protein BMI-1 [Otolemur garnettii]
Length = 469
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|402879774|ref|XP_003903504.1| PREDICTED: polycomb complex protein BMI-1 [Papio anubis]
Length = 469
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 219 QDIVYKLVPG 228
>gi|397501528|ref|XP_003821435.1| PREDICTED: polycomb complex protein BMI-1 [Pan paniscus]
Length = 469
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|260817004|ref|XP_002603377.1| hypothetical protein BRAFLDRAFT_80370 [Branchiostoma floridae]
gi|229288696|gb|EEN59388.1| hypothetical protein BRAFLDRAFT_80370 [Branchiostoma floridae]
Length = 922
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 209 CTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDD 268
C E++ + + + S + L LG+ C+ +GD AV+Y S++ +M+ D
Sbjct: 546 CLEELLQNYQTRFGEASMHSDIVQTLHKLGEACKNIGDNKNAVSYHERSLQ-MMRTIYGD 604
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
+++SLN +G GD + A SY+ RSL++RR ++ P ++A+SL
Sbjct: 605 NTAHPNIAMSLNNLGLALMNIGDNKNAVSYHERSLHMRRTIYGDNTAHP----NIAMSLN 660
Query: 329 KVADVDRSIGNEDVAVDGFQEAIK 352
+ + ++G+ AV +++++
Sbjct: 661 NLGNAWMNLGDHKKAVSYHEQSLQ 684
>gi|74211363|dbj|BAE26436.1| unnamed protein product [Mus musculus]
Length = 324
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKNRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|317419829|emb|CBN81865.1| Polycomb complex protein BMI-1-A [Dicentrarchus labrax]
Length = 333
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H + +N D+ E A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKNEMKRRRDFYAEHPVDASNGSNEDRGE-VADEDKRIITDD 127
>gi|323276616|ref|NP_001190991.1| COMMD3-BMI1 read-through protein [Homo sapiens]
Length = 469
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 219 QDIVYKLVPG 228
>gi|91792304|ref|YP_561955.1| transcriptional regulatory protein-like protein [Shewanella
denitrificans OS217]
gi|91714306|gb|ABE54232.1| transcriptional regulatory protein-like protein [Shewanella
denitrificans OS217]
Length = 1131
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 177 DVSMERGAFLVQQAMRAFRAQNVESAKSRL-SLCTEDIRDQIERMGNTSELCSQLGAVLG 235
+V+ RG + +A++AF E+AK L L TED + L LGA
Sbjct: 727 EVAYSRGK--LDEAIKAF-----EAAKLLLDKLYTEDKAN--------PTLLKVLGANAF 771
Query: 236 MLGDCCRAMGD---ADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDL 292
LG A + A+ + + D + LM L DD++ LS +LN +G L D
Sbjct: 772 WLGQIPYAQSNWPLAEKYLTLYRDYSDALMTLTPDDVDAWVELSYALNSLGSLALKQLDY 831
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
QAA + + RSL+++ A+ + D A +L +A ++ IGN D A+ + EA
Sbjct: 832 QAANTAFNRSLSLKTQALVKDPKNDYLRSDRADTLNWLAKINIPIGNIDEALTLYNEAQL 891
Query: 353 RLESLTLKPEEAGLEQRRLSVL 374
LE L K + RLS +
Sbjct: 892 ELEMLLTKANDDANLMSRLSYI 913
>gi|291402220|ref|XP_002717444.1| PREDICTED: BMI1 polycomb ring finger oncogene [Oryctolagus
cuniculus]
Length = 469
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|194227110|ref|XP_001496144.2| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Equus
caballus]
Length = 469
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|54695770|gb|AAV38257.1| B lymphoma Mo-MLV insertion region (mouse) [Homo sapiens]
Length = 326
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|432108191|gb|ELK33111.1| Polycomb complex protein BMI-1 [Myotis davidii]
Length = 326
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEGHAR--IKRSH-----------TNSDKEE--DEAGENKKVIYED 177
QD+V + + G + +KR TN E+ + A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADATNGSNEDRGEVADEDKRIITDD 128
>gi|46559391|ref|NP_031578.2| polycomb complex protein BMI-1 [Mus musculus]
gi|115066|sp|P25916.1|BMI1_MOUSE RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|192201|gb|AAA37299.1| zinc finger protein [Mus musculus]
gi|192203|gb|AAA37300.1| bmi-1 [Mus musculus]
gi|31565373|gb|AAH53708.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|38614119|gb|AAH56384.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|84872481|gb|ABC67286.1| PCGF4 [Mus musculus]
gi|148676156|gb|EDL08103.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676157|gb|EDL08104.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676159|gb|EDL08106.1| mCG9550, isoform CRA_a [Mus musculus]
Length = 324
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|148676158|gb|EDL08105.1| mCG9550, isoform CRA_b [Mus musculus]
Length = 334
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 26 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 85
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 86 QDIVYKLVPG 95
>gi|291873|gb|AAA19873.1| putative [Homo sapiens]
gi|371929009|gb|AEX59150.1| polycomb ring finger protein [Sus scrofa]
Length = 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|350589578|ref|XP_003130828.2| PREDICTED: polycomb complex protein BMI-1-like [Sus scrofa]
Length = 469
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|73948737|ref|XP_858578.1| PREDICTED: polycomb complex protein BMI-1 isoform 3 [Canis lupus
familiaris]
gi|301754703|ref|XP_002913196.1| PREDICTED: polycomb complex protein BMI-1-like [Ailuropoda
melanoleuca]
gi|281350791|gb|EFB26375.1| hypothetical protein PANDA_000973 [Ailuropoda melanoleuca]
Length = 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|54695768|gb|AAV38256.1| B lymphoma Mo-MLV insertion region (mouse) [synthetic construct]
gi|61366456|gb|AAX42862.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|417409780|gb|JAA51381.1| Putative locus-specific chromosome binding protein, partial
[Desmodus rotundus]
Length = 332
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 22 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 81
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 82 QDIVYKLVPG 91
>gi|388374|gb|AAB27059.1| flvi-2/bmi-1 [Homo sapiens]
Length = 289
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 5 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 64
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H ++++++ + A E+K++I +D
Sbjct: 65 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANSSNEDRGEVADEDKRIITDD 117
>gi|27883842|ref|NP_005171.4| polycomb complex protein BMI-1 [Homo sapiens]
gi|197098134|ref|NP_001126098.1| polycomb complex protein BMI-1 [Pongo abelii]
gi|114692354|ref|XP_001136082.1| PREDICTED: polycomb complex protein BMI-1 isoform 2 [Pan
troglodytes]
gi|426364177|ref|XP_004049196.1| PREDICTED: polycomb complex protein BMI-1 [Gorilla gorilla gorilla]
gi|22258801|sp|P35226.2|BMI1_HUMAN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4; AltName:
Full=RING finger protein 51
gi|75061773|sp|Q5R8L2.1|BMI1_PONAB RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|15341688|gb|AAH11652.1| BMI1 polycomb ring finger oncogene [Homo sapiens]
gi|55730352|emb|CAH91898.1| hypothetical protein [Pongo abelii]
gi|60814344|gb|AAX36297.1| B lymphoma Mo-MLV insertion region [synthetic construct]
gi|119606554|gb|EAW86148.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606556|gb|EAW86150.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606557|gb|EAW86151.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606560|gb|EAW86154.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|189053794|dbj|BAG36046.1| unnamed protein product [Homo sapiens]
gi|208965886|dbj|BAG72957.1| BMI1 polycomb ring finger oncogene [synthetic construct]
gi|355782688|gb|EHH64609.1| Polycomb group RING finger protein 4 [Macaca fascicularis]
gi|431917704|gb|ELK16969.1| Polycomb complex protein BMI-1 [Pteropus alecto]
Length = 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|60654235|gb|AAX29810.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|344249026|gb|EGW05130.1| Polycomb complex protein BMI-1 [Cricetulus griseus]
Length = 324
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 26/139 (18%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYEDVSMERGA 184
QD+V + + G + +KR +H ++D ED A E+K++I +D +
Sbjct: 76 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDDEIISLSI 135
Query: 185 FLVQQAMRAFRAQNVESAK 203
Q R+ R N E +K
Sbjct: 136 EFFDQN-RSDRKVNKEKSK 153
>gi|353236097|emb|CCA68098.1| hypothetical protein PIIN_01966 [Piriformospora indica DSM 11827]
Length = 523
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 21 GENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGY 80
+NS P + P S + P AS S+ P+A+ + +SDS S PP PF
Sbjct: 37 SDNSTLPPCQTPISHSPPLHDAS----PTSSSPEAQIQSPQERSDSEHSQ--PPSDPFSK 90
Query: 81 DAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
+ G L C IC L E TPC H +C +C+ R D CPLC D +
Sbjct: 91 ALR----GLLQCEICLNTLNE-PVTTPCQHTFCTSCLQRSLDHLATCPLCRHDYTNV 142
>gi|56119143|ref|NP_001007989.1| polycomb complex protein BMI-1 [Gallus gallus]
gi|82196525|sp|Q5SDR3.1|BMI1_CHICK RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|52078091|gb|AAU25821.1| BMI1 [Gallus gallus]
Length = 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 128
>gi|332862823|ref|XP_001147119.2| PREDICTED: polycomb complex protein BMI-1 isoform 2, partial [Pan
troglodytes]
Length = 332
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 22 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 81
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 82 QDIVYKLVPG 91
>gi|68163489|ref|NP_001020133.1| polycomb complex protein BMI-1 [Felis catus]
gi|22256724|sp|Q9TST0.1|BMI1_FELCA RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|6012977|emb|CAB57313.1| Bmi-1 protein [Felis catus]
Length = 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|84000133|ref|NP_001033161.1| polycomb complex protein BMI-1 [Bos taurus]
gi|122138672|sp|Q32KX7.1|BMI1_BOVIN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|81674800|gb|AAI09872.1| BMI1 polycomb ring finger oncogene [Bos taurus]
gi|296481449|tpg|DAA23564.1| TPA: polycomb complex protein BMI-1 [Bos taurus]
gi|440901143|gb|ELR52137.1| Polycomb complex protein BMI-1 [Bos grunniens mutus]
Length = 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|35902786|ref|NP_919347.1| polycomb complex protein BMI-1-A [Danio rerio]
gi|21668469|dbj|BAC01266.1| psc1 [Danio rerio]
Length = 322
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 18 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTL 77
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H + ++ +++ + A E+K++I +D
Sbjct: 78 QDIVYKLVPGLFKNEMKRRRDFYAEHPSVDAANGSNEDRGEVADEDKRIITDD 130
>gi|334348830|ref|XP_001367832.2| PREDICTED: polycomb complex protein BMI-1-like [Monodelphis
domestica]
Length = 589
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 279 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 338
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 339 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 391
>gi|358461918|ref|ZP_09172067.1| Tetratricopeptide TPR_1 repeat-containing protein [Frankia sp. CN3]
gi|357072513|gb|EHI82051.1| Tetratricopeptide TPR_1 repeat-containing protein [Frankia sp. CN3]
Length = 388
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKL----------PMDDLEIIHTLSVSLNKIGDLK 286
+GD R GDA A+A +A+ V + P + H+LS+ +G+++
Sbjct: 215 VGDMLRLRGDAAGALARYAEGVTTARRALAVAGGTDIDPTVPRALFHSLSL----VGNMR 270
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
Y GD+ A + SL + R + P+ + D++V L KVA ++G+ A++G
Sbjct: 271 YDQGDVAGALESFAESLALVRWLRTEYGEHPTVLRDLSVGLDKVAGAKEALGDLPAAIEG 330
Query: 347 FQEAI 351
F+EA+
Sbjct: 331 FEEAL 335
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
L+ +L KIGDL+ GD AA Y +L VRR + + +V + D++ L V D+
Sbjct: 160 LANTLEKIGDLRQQQGDTTAALDAYTEALEVRRGLLSVYGDVAPLLRDISRGLLDVGDML 219
Query: 335 RSIGNEDVAVDGFQEAI 351
R G+ A+ + E +
Sbjct: 220 RLRGDAAGALARYAEGV 236
>gi|351709698|gb|EHB12617.1| Polycomb complex protein BMI-1 [Heterocephalus glaber]
Length = 326
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|260814960|ref|XP_002602181.1| hypothetical protein BRAFLDRAFT_76869 [Branchiostoma floridae]
gi|229287488|gb|EEN58193.1| hypothetical protein BRAFLDRAFT_76869 [Branchiostoma floridae]
Length = 930
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ A L LG+ R +G+ A++Y+ S++ MK + + H ++ SLN +G
Sbjct: 273 IAASLNNLGNAWRNLGNHRKAISYYEQSIQ--MKRSIYGEDTAHLDIAASLNNLGATWRN 330
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +++ ++R + P D+A SL + R++G+ A+ ++
Sbjct: 331 LGDYRKAISYYEQAIQMKRSIYGEDTAHP----DIAASLNNLGATWRNLGDHRKAISYYE 386
Query: 349 EAIKRLESL 357
+A++ S+
Sbjct: 387 QALEMTRSI 395
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ L LG R +GD A++Y+ ++E M + H+ ++ SLN +G+
Sbjct: 519 IAGSLNNLGATWRNLGDHRKAISYYEQALE--MTRSIYGKGTAHSDIAGSLNNLGNALSN 576
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L + R + P D+A SL + + +G+ A+ ++
Sbjct: 577 LGDHRKAISYYEQALEMTRSIYGEDTAHP----DIATSLNNMGNTWGDLGDHRKAISYYE 632
Query: 349 EAIKRLESL----TLKPEEAGLEQRRLSVLEFLNNQLS 382
++++ + S+ L L+QR + F+ N ++
Sbjct: 633 QSLQMMRSIYVGQVLTMTSPDLQQRLQDLDTFIQNLMT 670
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 34/165 (20%)
Query: 227 CSQLGAVLGMLGDCCRA-------------------MGDADAAVAYFADSVEFLMKLPMD 267
+ LGA LGD +A +GD A++Y+ ++E + +
Sbjct: 365 LNNLGATWRNLGDHRKAISYYEQALEMTRSIYALSNLGDHRKAISYYEQALEMTRSIYGE 424
Query: 268 DL---EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVA 324
D +I +L+ N GDL GD + A SYY ++L + R +++ P D+
Sbjct: 425 DTAHPDIATSLNNMGNTWGDL----GDHRKAISYYEQALQMMRSIYGKNTAHP----DIV 476
Query: 325 VSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL----TLKPEEAG 365
SL + R +G+ A+ ++++I+ S+ T P+ AG
Sbjct: 477 KSLNNLCVAWREVGDYRKAISYYEQSIQMKRSIYGEDTAHPDIAG 521
>gi|149412168|ref|XP_001511592.1| PREDICTED: polycomb complex protein BMI-1-like [Ornithorhynchus
anatinus]
Length = 326
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|157819305|ref|NP_001100838.1| BMI1 polycomb ring finger oncogene [Rattus norvegicus]
gi|149021165|gb|EDL78772.1| polycomb group ring finger 4 (predicted) [Rattus norvegicus]
gi|195540247|gb|AAI68209.1| Bmi1 protein [Rattus norvegicus]
Length = 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|158563842|sp|Q8JIR0.2|BMI1A_DANRE RecName: Full=Polycomb complex protein BMI-1-A; AltName:
Full=Polycomb group RING finger protein 4-A
gi|29436448|gb|AAH49423.1| Bmi1 protein [Danio rerio]
Length = 320
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H + ++ +++ + A E+K++I +D
Sbjct: 76 QDIVYKLVPGLFKNEMKRRRDFYAEHPSVDAANGSNEDRGEVADEDKRIITDD 128
>gi|405957199|gb|EKC23428.1| Polycomb complex protein BMI-1 [Crassostrea gigas]
Length = 894
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 85 FKIGP-----LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK--- 132
KI P L C++C L + + C H +CK CI R+ K CP+C + K
Sbjct: 1 MKINPSLNPHLICVLCGGYLIDATTIVECLHSFCKTCIVRYLETSKFCPICDVQVHKTKP 60
Query: 133 ---IEADTTLQDVVDRFIEG 149
I D TLQD+V + + G
Sbjct: 61 FTNIRLDHTLQDLVYKLVPG 80
>gi|410908881|ref|XP_003967919.1| PREDICTED: polycomb complex protein BMI-1-like [Takifugu rubripes]
Length = 529
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 220 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTL 279
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 280 QDIVYKLVPG 289
>gi|291190390|ref|NP_001167252.1| polycomb complex protein BMI-1-A [Salmo salar]
gi|223648886|gb|ACN11201.1| Polycomb complex protein BMI-1-A [Salmo salar]
Length = 334
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 18 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVPVHKTKPLLNIRSDKTL 77
Query: 140 QDVVDRFIEG---------------HARIKRSHTNSDKEEDEAGENKKVIYED 177
QD+V + + G H + + +++ + A E+K++I +D
Sbjct: 78 QDIVYKLVPGLFKNEMKRRRDFYAAHPSVDATTRSNEDRGEVADEDKRIITDD 130
>gi|260827951|ref|XP_002608927.1| hypothetical protein BRAFLDRAFT_85508 [Branchiostoma floridae]
gi|229294281|gb|EEN64937.1| hypothetical protein BRAFLDRAFT_85508 [Branchiostoma floridae]
Length = 217
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 18/89 (20%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++CM+C+ L + + T C H +CK+CI ++ DCP C I + I D T+
Sbjct: 15 ITCMLCKGYLVDATTITECLHTFCKSCIVQYLEENNDCPTCKQVIHQSHPLNYISHDRTM 74
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAG 168
QD+V + + G D EED G
Sbjct: 75 QDIVYKLVPG--------LQKDGEEDSNG 95
>gi|332019596|gb|EGI60074.1| Polycomb group protein Psc [Acromyrmex echinatior]
Length = 1364
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 87 IGP-LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK----IEADT 137
I P L C++C+ L + + C H +CK+CI ++ CPLC I K +AD
Sbjct: 13 INPHLICLLCRGYLIDATTVGECLHCFCKSCILKYLSTAAHCPLCKHAINKAKPNFKADK 72
Query: 138 TLQDVVDRFIEG 149
LQD+V + + G
Sbjct: 73 ALQDIVYKLVPG 84
>gi|405976241|gb|EKC40754.1| E3 ubiquitin-protein ligase UHRF1 [Crassostrea gigas]
Length = 793
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 9/69 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR-FKD----CPLCGADI---EKIEADTTLQD 141
+C+ CQ ++F+ T CSH CK+CI+R FK CPLC D+ K+ ++TLQD
Sbjct: 721 FTCICCQEIVFK-PVTTECSHNVCKSCITRSFKADVYCCPLCRTDLGKDYKMPVNSTLQD 779
Query: 142 VVDRFIEGH 150
++ +F G+
Sbjct: 780 ILKQFFPGY 788
>gi|189502336|ref|YP_001958053.1| hypothetical protein Aasi_0966 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497777|gb|ACE06324.1| hypothetical protein Aasi_0966 [Candidatus Amoebophilus asiaticus
5a2]
Length = 2145
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LGD RA+ A+ Y+ ++E L + D I T SLN +GD+ G Q A
Sbjct: 1864 LGDDYRALDQYQEALTYYQQALEIRKSLYIGDNPFIAT---SLNSLGDIYQALGQHQKAL 1920
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLES 356
+YY ++ ++R+ V N P+ +A+S+ + V +++G A+ +QEA+++ +
Sbjct: 1921 TYYQQAFDMRK--VLYKGNHPT----IAISINNLGKVYQALGQHQEALKYYQEALEKRRT 1974
Query: 357 L 357
L
Sbjct: 1975 L 1975
Score = 44.7 bits (104), Expect = 0.071, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
LG +A+G A+ Y+ +++E L + H +++ SLN +GD+ G Q A
Sbjct: 1948 LGKVYQALGQHQEALKYYQEALEKRRTL----YKGYHRSIATSLNNLGDVYQALGQHQEA 2003
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
+YY ++L++R+ K N P+ +AVSL + +V +++G A+ +Q+A+ +
Sbjct: 2004 LTYYQQALDMRKALYK--GNHPA----IAVSLNNLGNVYQTLGQHQEALTYYQQALDMRK 2057
Query: 356 SL 357
L
Sbjct: 2058 GL 2059
Score = 43.9 bits (102), Expect = 0.13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LGD +A+G A+ Y+ + + L + T+++S+N +G + G Q
Sbjct: 1903 LNSLGDIYQALGQHQKALTYYQQAFDMRKVLYKGNHP---TIAISINNLGKVYQALGQHQ 1959
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A YY +L RR K + +A SL + DV +++G A+ +Q+A+
Sbjct: 1960 EALKYYQEALEKRRTLYKGYHR------SIATSLNNLGDVYQALGQHQEALTYYQQALDM 2013
Query: 354 LESL 357
++L
Sbjct: 2014 RKAL 2017
Score = 43.5 bits (101), Expect = 0.20, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LG+ +++G A+ Y+ ++ L D I ++SLN IG++ G Q A
Sbjct: 1528 LGNIYQSVGQYQEALKYYQQGLDMQKGLYSGDHADI---AMSLNNIGNIYKILGQHQEAL 1584
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLES 356
YY ++ +R+ V N P D+A+SL + ++ +++G A+ +QEA+ +S
Sbjct: 1585 KYYQQAFEIRK--VFYAGNHP----DIAISLNSLGNICKTLGQYQEALKYYQEALGIRQS 1638
Query: 357 L 357
L
Sbjct: 1639 L 1639
Score = 42.4 bits (98), Expect = 0.35, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 242 RAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVR 301
+A+G+ A+ Y +++ L D+ ++ SLN +G++ G Q A Y +
Sbjct: 1449 QALGEYQEALKYIKQALDMRKALYTDNHP---QVAQSLNNLGNIYKTLGQYQEALEYLQQ 1505
Query: 302 SLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+L++R+D K LD+A+SL + ++ +S+G A+ +Q+ + + L
Sbjct: 1506 ALDMRKDLYKHKH------LDIAISLINLGNIYQSVGQYQEALKYYQQGLDMQKGL 1555
Score = 42.0 bits (97), Expect = 0.59, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LG+ C+ +G A+ Y+ +++ L + + I + S+N IG + G+ Q
Sbjct: 1609 LNSLGNICKTLGQYQEALKYYQEALGIRQSLYIGNHPDI---AESINNIGFIYQALGEYQ 1665
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A Y +L +R+ N P D+A+SL + D+ +++G A+ +Q+AI
Sbjct: 1666 EALKYLKYALEMRQALYI--GNHP----DIAISLNDLGDIYQALGQHQEALKYYQQAINM 1719
Query: 354 LESL 357
++L
Sbjct: 1720 QKTL 1723
Score = 41.2 bits (95), Expect = 0.90, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 242 RAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVR 301
+A+G+ A+ Y ++E L + + I ++SLN +GD+ G Q A YY +
Sbjct: 1659 QALGEYQEALKYLKYALEMRQALYIGNHPDI---AISLNDLGDIYQALGQHQEALKYYQQ 1715
Query: 302 SLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
++N+++ + P D+A+SL + ++ +++G A++ +Q+A K
Sbjct: 1716 AINMQKTLYT--GDHP----DIAISLDHIGNIYQALGQYQEALEYYQQAFK 1760
Score = 39.7 bits (91), Expect = 2.7, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LGD +A+G A+ Y+ ++ L D I ++SL+ IG++ G Q
Sbjct: 1693 LNDLGDIYQALGQHQEALKYYQQAINMQKTLYTGDHPDI---AISLDHIGNIYQALGQYQ 1749
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
A YY ++ +++ V N P D+A SL + + +GN A +Q+A+
Sbjct: 1750 EALEYYQQAFKMQK--VFYTGNHP----DIATSLNSLGHAYKLLGNYQEAFKYYQQAL 1801
>gi|91094599|ref|XP_966675.1| PREDICTED: similar to posterior sex combs protein [Tribolium
castaneum]
Length = 798
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK----IEADTTLQD 141
L+C +C+ L + + + C H +C++CI +F CP+C I K ++ D TLQD
Sbjct: 19 LTCYLCKGYLIDATTISECLHSFCRSCIIKFLQKNCYCPVCEVIINKAKPCLKLDKTLQD 78
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 79 IVYKLVPG 86
>gi|294875374|ref|XP_002767291.1| hypothetical protein Pmar_PMAR024486 [Perkinsus marinus ATCC 50983]
gi|239868854|gb|EER00009.1| hypothetical protein Pmar_PMAR024486 [Perkinsus marinus ATCC 50983]
Length = 844
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS----RFKDCPLCGADIEKIEADTTLQDVVDR 145
L C ICQ L++ C H +C +C+S R DCP C + + ++ + T+ ++ ++
Sbjct: 463 LRCAICQDLMYRPVMVLDCLHNFCSSCLSQWLQRHTDCPQCRSRVRSVKPNRTVVNLTEK 522
Query: 146 FIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSR 205
+EG R ++ D++ K Y+ + RG FL+ A A V +S
Sbjct: 523 LVEGDKIRDRRSDQDKRQSDDSDTLLKNDYDLSKVNRG-FLLAAHGSATSAGTV--GRSD 579
Query: 206 LSLCTEDIRDQIE 218
+S D D+ E
Sbjct: 580 ISYTDYDSYDEYE 592
>gi|444713977|gb|ELW54865.1| Polycomb group RING finger protein 2 [Tupaia chinensis]
Length = 318
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 33 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|343962543|dbj|BAK62859.1| polycomb group RING finger protein 4 [Pan troglodytes]
Length = 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVRVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|47223482|emb|CAF97969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 300
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETNKYCPICDVQVHKTKPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|388454613|ref|NP_001252868.1| polycomb group RING finger protein 2 [Macaca mulatta]
gi|387542154|gb|AFJ71704.1| polycomb group RING finger protein 2 [Macaca mulatta]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|270016418|gb|EFA12864.1| hypothetical protein TcasGA2_TC004246 [Tribolium castaneum]
Length = 838
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK----IEADTTLQD 141
L+C +C+ L + + + C H +C++CI +F CP+C I K ++ D TLQD
Sbjct: 19 LTCYLCKGYLIDATTISECLHSFCRSCIIKFLQKNCYCPVCEVIINKAKPCLKLDKTLQD 78
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 79 IVYKLVPG 86
>gi|344285955|ref|XP_003414725.1| PREDICTED: polycomb group RING finger protein 2 [Loxodonta
africana]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|395826556|ref|XP_003786483.1| PREDICTED: polycomb group RING finger protein 2 [Otolemur
garnettii]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|403279413|ref|XP_003931245.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 43 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 102
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 103 QDIVYKLVPG 112
>gi|426348519|ref|XP_004041881.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426348521|ref|XP_004041882.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|355754087|gb|EHH58052.1| DNA-binding protein Mel-18 [Macaca fascicularis]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|328721666|ref|XP_001943283.2| PREDICTED: hypothetical protein LOC100162794 [Acyrthosiphon pisum]
Length = 1082
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK---IEADTTLQDV 142
L C++C L + + C H +C++CI D CP+C DI+ ++ D LQD+
Sbjct: 38 LICVLCLGYLVDATSIVECLHSFCRSCIVLHLDKNNFCPICREDIQNSKVLKPDKALQDI 97
Query: 143 VDRFIEG--HARIKR 155
V + + G H+ +KR
Sbjct: 98 VYKLVPGLYHSEMKR 112
>gi|149723900|ref|XP_001501632.1| PREDICTED: polycomb group RING finger protein 2 [Equus caballus]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|145525256|ref|XP_001448450.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415994|emb|CAK81053.1| unnamed protein product [Paramecium tetraurelia]
Length = 516
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDR 145
+ C IC ++F+C PC H +C AC S + K CP C +++ + + + +VV++
Sbjct: 154 IHCPICDDVIFQCVSLIPCLHNFCGACFSDWMAKQKTCPSCRKEVQSVNKNPMVNNVVEK 213
Query: 146 FIEGHARIKR 155
++ H KR
Sbjct: 214 YLLMHPEKKR 223
>gi|114667779|ref|XP_511440.2| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
troglodytes]
gi|397477039|ref|XP_003809893.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Pan
paniscus]
gi|397477041|ref|XP_003809894.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
paniscus]
gi|410051474|ref|XP_003953100.1| PREDICTED: polycomb group RING finger protein 2 [Pan troglodytes]
gi|410210824|gb|JAA02631.1| polycomb group ring finger 2 [Pan troglodytes]
gi|410293958|gb|JAA25579.1| polycomb group ring finger 2 [Pan troglodytes]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|6005964|ref|NP_009075.1| polycomb group RING finger protein 2 [Homo sapiens]
gi|462585|sp|P35227.1|PCGF2_HUMAN RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=RING
finger protein 110; AltName: Full=Zinc finger protein
144
gi|285933|dbj|BAA03074.1| Mel-18 protein [Homo sapiens]
gi|13436062|gb|AAH04858.1| Polycomb group ring finger 2 [Homo sapiens]
gi|18999362|gb|AAH24255.1| Polycomb group ring finger 2 [Homo sapiens]
gi|119580932|gb|EAW60528.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
gi|119580933|gb|EAW60529.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|117644306|emb|CAL37647.1| hypothetical protein [synthetic construct]
gi|208967072|dbj|BAG73550.1| polycomb group ring finger 2 [synthetic construct]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|402899970|ref|XP_003912956.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Papio
anubis]
gi|402899972|ref|XP_003912957.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Papio
anubis]
gi|402899974|ref|XP_003912958.1| PREDICTED: polycomb group RING finger protein 2 isoform 3 [Papio
anubis]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|348562307|ref|XP_003466952.1| PREDICTED: polycomb group RING finger protein 2-like [Cavia
porcellus]
Length = 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|30584759|gb|AAP36632.1| Homo sapiens zinc finger protein 144 (Mel-18) [synthetic construct]
gi|60652807|gb|AAX29098.1| ring finger protein 110 [synthetic construct]
Length = 345
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|441660761|ref|XP_004093035.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Nomascus leucogenys]
Length = 286
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|327275580|ref|XP_003222551.1| PREDICTED: polycomb group RING finger protein 2-like [Anolis
carolinensis]
Length = 337
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|260814974|ref|XP_002602188.1| hypothetical protein BRAFLDRAFT_216744 [Branchiostoma floridae]
gi|229287495|gb|EEN58200.1| hypothetical protein BRAFLDRAFT_216744 [Branchiostoma floridae]
Length = 204
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDL---EIIHTLSVSLNKIGDLKYYGG 290
L LG+ +GD A++Y+ S++ ++ ++ +I +LS N G+L G
Sbjct: 86 LNNLGNAWGNLGDYIKAISYYKQSLQIKRRIYGEETAHPDIAGSLSNMGNAWGNL----G 141
Query: 291 DLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEA 350
D + A SYY +SL +RR ++ P D+A SL + + R++G+ + A+ ++A
Sbjct: 142 DYRKAVSYYEQSLQLRRSIYGEYTAHP----DIADSLTNLGNAWRNLGDHEKAISYHEQA 197
Query: 351 IKRLESL 357
+ + S+
Sbjct: 198 LDMIRSI 204
>gi|296202674|ref|XP_002748549.1| PREDICTED: polycomb group RING finger protein 2 [Callithrix
jacchus]
Length = 344
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|417410052|gb|JAA51507.1| Putative polycomb group ring finger protein 2, partial [Desmodus
rotundus]
Length = 359
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 30 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 89
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 90 QDIVYKLVPG 99
>gi|403279411|ref|XP_003931244.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|124001541|ref|NP_001074220.1| polycomb complex protein BMI-1-B [Danio rerio]
gi|82208348|sp|Q7T3E6.1|BMI1B_DANRE RecName: Full=Polycomb complex protein BMI-1-B; AltName:
Full=Polycomb group RING finger protein 4-B
gi|31419435|gb|AAH53151.1| B lymphoma Mo-MLV insertion region 1b [Danio rerio]
Length = 324
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIVECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|426237855|ref|XP_004012873.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Ovis aries]
Length = 324
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|395532615|ref|XP_003768365.1| PREDICTED: polycomb group RING finger protein 2 [Sarcophilus
harrisii]
Length = 289
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 30 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 89
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 90 QDIVYKLVPG 99
>gi|355568454|gb|EHH24735.1| DNA-binding protein Mel-18 [Macaca mulatta]
Length = 341
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|410917430|ref|XP_003972189.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2-like [Takifugu rubripes]
Length = 362
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C L + + C H +CK CI F K CP C + K I AD TL
Sbjct: 39 LTCPLCAGYLIDATTIVECLHSFCKTCIVAFLETNKFCPRCDVQVHKTCPQLSIRADKTL 98
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 99 QDIVYKLVPG 108
>gi|221136916|ref|NP_001137578.1| polycomb group RING finger protein 2 [Bos taurus]
gi|296476466|tpg|DAA18581.1| TPA: polycomb group ring finger 2 [Bos taurus]
Length = 344
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|149062761|gb|EDM13184.1| rCG48011 [Rattus norvegicus]
Length = 203
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAGENK 171
++++ + + G + S + K ++E EN+
Sbjct: 76 EEIIFKLVPGLREHEVSKVDKSKADEEGDENQ 107
>gi|410980897|ref|XP_003996810.1| PREDICTED: polycomb group RING finger protein 2 [Felis catus]
Length = 361
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 33 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|126308194|ref|XP_001366744.1| PREDICTED: polycomb group RING finger protein 2 [Monodelphis
domestica]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|395749268|ref|XP_003778916.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Pongo abelii]
Length = 385
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|260793709|ref|XP_002591853.1| hypothetical protein BRAFLDRAFT_125514 [Branchiostoma floridae]
gi|229277065|gb|EEN47864.1| hypothetical protein BRAFLDRAFT_125514 [Branchiostoma floridae]
Length = 1421
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 149 GHARIKRSHTNSDKEEDEAGENKKVI--YE-DVSMERGAFLVQQAM--RAFRAQNVESAK 203
H I RS N G++KK I YE +SME+ + A A N+ SA
Sbjct: 1196 AHPDIARSLRNLGVSWGNLGDHKKAISYYEQSLSMEKTIYGDNPAHPDTAASLNNLGSAW 1255
Query: 204 SRLSLCTEDIRDQIERM---------GNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYF 254
+L + + E+ NT+ + A+L LG C +GD A++Y+
Sbjct: 1256 HKLGVQNKKAISYYEQALTMMKIVYGDNTAHPDIDIAALLQNLGCCWSKLGDHKKAISYY 1315
Query: 255 ADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHS 314
S+ MK D ++ SLN +G GDL+ ARSY+ +SL +R+ +
Sbjct: 1316 EQSIT-TMKTIHGDNTAHPDIAASLNNLGTSWVKCGDLKKARSYFEQSLTMRKAIYGETT 1374
Query: 315 NVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
PS +A +L + + +G+E A+D Q+
Sbjct: 1375 AHPS----IAGTLNNLRLLWTEMGDEKRAMDYMQQ 1405
>gi|260814980|ref|XP_002602191.1| hypothetical protein BRAFLDRAFT_76878 [Branchiostoma floridae]
gi|229287498|gb|EEN58203.1| hypothetical protein BRAFLDRAFT_76878 [Branchiostoma floridae]
Length = 685
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L +G+ R +GD A++Y+A S++ M+ + H ++ SLN +G
Sbjct: 190 IAASLNNMGNAWRDLGDHRKAISYYAQSLQ--MRRSIYGKNTAHPEIAASLNNMGTAWRN 247
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L +RR + + P ++A SL + R++G+ A+ ++
Sbjct: 248 LGDHRKAISYYEQALQMRRSICREDNAHP----NIAASLNNLGATWRNLGDHRKAISYYE 303
Query: 349 EAIKRLESL 357
++++ S+
Sbjct: 304 QSLQMRRSI 312
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKY 287
++ A L +G GD A++Y+ S++ MKL + + H ++ SLN +G+
Sbjct: 145 EIAASLNNMGTPGETSGDHRKAISYYEQSLQ--MKLSIYREDNAHPDIAASLNNMGNAWR 202
Query: 288 YGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
GD + A SYY +SL +RR +++ P ++A SL + R++G+ A+ +
Sbjct: 203 DLGDHRKAISYYAQSLQMRRSIYGKNTAHP----EIAASLNNMGTAWRNLGDHRKAISYY 258
Query: 348 QEAIKRLESL 357
++A++ S+
Sbjct: 259 EQALQMRRSI 268
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYY 288
++ A L +G R +GD A++Y+ +++ + +D ++ SLN +G
Sbjct: 233 EIAASLNNMGTAWRNLGDHRKAISYYEQALQMRRSICRED-NAHPNIAASLNNLGATWRN 291
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL +RR + P D+A SL + R++G+ A+ ++
Sbjct: 292 LGDHRKAISYYEQSLQMRRSIYGEDTAHP----DIAASLNNMGTAWRNLGDHRKAISYYE 347
Query: 349 EAIKRLESL 357
+A++ S+
Sbjct: 348 QALQMKRSI 356
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L LG C +GD A++Y+ S++ + + +D ++ SLN +G+
Sbjct: 366 IAASLNNLGATCSNLGDHRKAISYYEQSLQMMRSIYGED-NAHPDIAGSLNNMGNAWSNL 424
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY ++L ++R + + P D+A SL + + ++G+ AV +++
Sbjct: 425 GDHRKAVSYYEQALQMKRSICREDNAHP----DIADSLNNLGNACSNLGDNRKAVSYYEQ 480
Query: 350 AIK 352
A++
Sbjct: 481 ALE 483
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG R +GD A++Y+ S++ M+ + + H ++ SLN +G
Sbjct: 278 IAASLNNLGATWRNLGDHRKAISYYEQSLQ--MRRSIYGEDTAHPDIAASLNNMGTAWRN 335
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L ++R + + P ++A SL + ++G+ A+ ++
Sbjct: 336 LGDHRKAISYYEQALQMKRSICREDNAHP----NIAASLNNLGATCSNLGDHRKAISYYE 391
Query: 349 EAIKRLESL 357
++++ + S+
Sbjct: 392 QSLQMMRSI 400
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG+ +GD A++Y+ S++ MK + + H ++ SLN +G
Sbjct: 14 IASSLNNLGNAWSNLGDHRKAISYYEQSLQ--MKRSIYGEDTAHPDIANSLNNLGSTWSN 71
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL ++R + P D+A+SL + +G+ A+ ++
Sbjct: 72 LGDNRKAISYYEQSLQMKRSIYGEDTAHP----DIAISLNNIGSACSDLGDYGKAISYYE 127
Query: 349 EAIKRLESL----TLKPEEA 364
+++ S+ T PE A
Sbjct: 128 QSLLTRRSIYGKNTAHPEIA 147
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L +G+ +GD AV+Y+ +++ MK + + H ++ SLN +G+
Sbjct: 410 IAGSLNNMGNAWSNLGDHRKAVSYYEQALQ--MKRSICREDNAHPDIADSLNNLGNACSN 467
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L +RR + + P ++A SL + ++G+ A+ F
Sbjct: 468 LGDNRKAVSYYEQALEMRRSTYGKRTAHP----NIASSLNNLGGAWTNLGDHRKAISYFD 523
Query: 349 EAIKRLESL----TLKPEEAGLEQRRLSVLEFLNNQLS 382
+A++ S+ L L+QR + F+ N ++
Sbjct: 524 QALEMRRSIYVGQVLTMTSPDLQQRLQDLDTFIQNLMT 561
>gi|355709609|gb|AES03649.1| Polycomb group RING finger protein 2 [Mustela putorius furo]
Length = 344
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|354474807|ref|XP_003499621.1| PREDICTED: polycomb group RING finger protein 2-like [Cricetulus
griseus]
Length = 342
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|47223969|emb|CAG06146.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C L + + C H +CK CI F K CP C + K I AD TL
Sbjct: 15 LTCPLCAGYLIDATTIVECLHSFCKTCIVAFLETNKFCPRCDVQVHKTCPQLSIRADKTL 74
Query: 140 QDVVDRFIEGHAR---IKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRA 196
QD+V + + G + +R ++ E E GE + E ++ + R+
Sbjct: 75 QDIVYKLVPGLFKDEMKRRRDFYAENRELEPGE----VVETFNIAEDEIISLSIQFYERS 130
Query: 197 QNVESAKS 204
+N E +S
Sbjct: 131 KNTERQRS 138
>gi|71896207|ref|NP_001025573.1| polycomb group ring finger 2 [Xenopus (Silurana) tropicalis]
gi|60552364|gb|AAH91007.1| pcgf2 protein [Xenopus (Silurana) tropicalis]
Length = 317
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + + K I +D TL
Sbjct: 16 LMCALCGGYFIDAATIVECLHSFCKTCILRYLEAHKFCPMCDSQVHKGRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEGHAR 152
QD+V + + G R
Sbjct: 76 QDIVYKLVPGLFR 88
>gi|427791005|gb|JAA60954.1| Putative b lymphoma mo-mlv insertion region 1b, partial
[Rhipicephalus pulchellus]
Length = 596
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++CM+C L + + C H +CK CI +F + CP+C + + I D TL
Sbjct: 61 ITCMLCNGYLVDATTLVECLHSFCKVCIVQFLNTSLLCPICDVPVHQTKPHQSIRLDRTL 120
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 121 QDIVYKVVPG 130
>gi|440904221|gb|ELR54760.1| Polycomb group RING finger protein 2 [Bos grunniens mutus]
Length = 353
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|390331620|ref|XP_799043.3| PREDICTED: E3 ubiquitin-protein ligase CHFR-like
[Strongylocentrotus purpuratus]
Length = 668
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 29/165 (17%)
Query: 10 ARPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDS 69
A D S + G+ + E + + D +K E AKPQ E D+ + + +++
Sbjct: 216 AEKDRTSGKGDGDAEERGREEKDATGGKEDGEGEKKTKEEGAKPQQE---DEEQDEILET 272
Query: 70 ASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPL 125
L C ICQ +L +C PC H +C ACIS + K CP
Sbjct: 273 --------------------LICSICQDILHKCISLQPCMHSFCAACISGWMKHSKRCPQ 312
Query: 126 CGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGEN 170
C +++ + + +VD +++ + +R T D EE +A N
Sbjct: 313 CRKSVKRFGHNYIVNSLVDAYLKQNPDKQR--TKEDLEEMDARGN 355
>gi|109158140|pdb|2H0D|A Chain A, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 97
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 12 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 71
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 72 QDIVYKLVPG 81
>gi|344249173|gb|EGW05277.1| Polycomb group RING finger protein 2 [Cricetulus griseus]
Length = 398
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 45 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|327274703|ref|XP_003222116.1| PREDICTED: polycomb complex protein BMI-1-like [Anolis
carolinensis]
Length = 473
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C+IC + + C H +CK CI + K CP+C + K I +D TL
Sbjct: 166 LMCVICGGYFIDATTIIECLHSFCKTCIVHYLETSKYCPICDVQVHKTRPLLNIRSDKTL 225
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 226 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 278
>gi|119580931|gb|EAW60527.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
gi|119580934|gb|EAW60530.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
Length = 257
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|192205|gb|AAA37301.1| zinc finger protein [Mus musculus]
Length = 249
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|432929897|ref|XP_004081281.1| PREDICTED: polycomb complex protein BMI-1-like [Oryzias latipes]
Length = 584
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 268 LICVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTL 327
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 328 QDIVYKLVPG 337
>gi|157786680|ref|NP_001099306.1| polycomb group RING finger protein 2 [Rattus norvegicus]
gi|149054053|gb|EDM05870.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054054|gb|EDM05871.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054055|gb|EDM05872.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054056|gb|EDM05873.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|187469317|gb|AAI67059.1| Pcgf2 protein [Rattus norvegicus]
Length = 342
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|196009860|ref|XP_002114795.1| hypothetical protein TRIADDRAFT_28310 [Trichoplax adhaerens]
gi|190582857|gb|EDV22929.1| hypothetical protein TRIADDRAFT_28310 [Trichoplax adhaerens]
Length = 214
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C+ L + S T C H YCK+C+ R+ CP C I + I D T+
Sbjct: 12 ITCGLCKGYLVDASTITECLHTYCKSCLVRYVQDSNRCPTCDIVIHETQPLYNIRMDRTM 71
Query: 140 QDVVDRFI 147
QD+VD+F+
Sbjct: 72 QDIVDKFV 79
>gi|6678635|ref|NP_033571.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028181|ref|NP_001156779.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028183|ref|NP_001156780.1| polycomb group RING finger protein 2 [Mus musculus]
gi|126937|sp|P23798.2|PCGF2_MOUSE RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=Melanoma
nuclear protein 18; AltName: Full=RING finger protein
110; AltName: Full=Zinc finger protein 144;
Short=Zfp-144
gi|220477|dbj|BAA14122.1| Mel-18 [Mus musculus]
gi|16741134|gb|AAH16419.1| Pcgf2 protein [Mus musculus]
gi|19548758|gb|AAL90776.1| mel-18 protein [Mus musculus]
gi|19548760|gb|AAL90777.1| mel-18 protein [Mus musculus]
gi|148684140|gb|EDL16087.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684141|gb|EDL16088.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684142|gb|EDL16089.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684143|gb|EDL16090.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
Length = 342
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|365826747|ref|ZP_09368645.1| hypothetical protein HMPREF0975_00428 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365265759|gb|EHM95498.1| hypothetical protein HMPREF0975_00428 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 399
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT------LSVSLNKIG 283
L L LG GD DAA A + + +E +L +E+ T +SV+LNK+G
Sbjct: 166 LSVSLQNLGWAAEMRGDWDAASAAYQEFLELTREL----VELQGTPQARRDVSVALNKMG 221
Query: 284 DLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVA 343
+ GD A + Y SL +R+ +++ P D++VSL + V + G+ D A
Sbjct: 222 RVGETFGDWTKAEAAYQESLEIRQ-GLEKELGTPKARRDLSVSLDNIGRVAEARGDWDKA 280
Query: 344 VDGFQEAI---KRLESLTLKPE 362
+QE + + LE L P+
Sbjct: 281 ETAYQETLRLARELEELLGTPQ 302
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 212 DIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAA-VAY-----FADSVEFLMKLP 265
+IR +E+ T + L L +G A GD D A AY A +E L+ P
Sbjct: 242 EIRQGLEKELGTPKARRDLSVSLDNIGRVAEARGDWDKAETAYQETLRLARELEELLGTP 301
Query: 266 MDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAV 325
E LS++L IG + GD A + Y SL + ++ +++ P D++
Sbjct: 302 QTRRE----LSLTLESIGRVAEARGDWDKAETAYQESLALMQE-LEKLLGTPEARCDLSC 356
Query: 326 SLAKVADVDRSIGNEDVAVDGFQEAIK 352
SLA V V G+ D A +QE+++
Sbjct: 357 SLASVGWVAEVRGDWDTAEAAYQESLR 383
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
+LE LSVSL +G GD AA + Y L + R+ V+ P DV+V+L
Sbjct: 159 ELEARRDLSVSLQNLGWAAEMRGDWDAASAAYQEFLELTRELVELQ-GTPQARRDVSVAL 217
Query: 328 AKVADVDRSIGNEDVAVDGFQEAIK 352
K+ V + G+ A +QE+++
Sbjct: 218 NKMGRVGETFGDWTKAEAAYQESLE 242
>gi|260815998|ref|XP_002602759.1| hypothetical protein BRAFLDRAFT_93705 [Branchiostoma floridae]
gi|229288071|gb|EEN58771.1| hypothetical protein BRAFLDRAFT_93705 [Branchiostoma floridae]
Length = 1309
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG+ R +GD AV+Y+ S+ LMKL + + H ++ SLN +G+
Sbjct: 615 IAASLNNLGEGWRYLGDYRKAVSYYEQSL--LMKLSIYGEDTAHPNIADSLNNLGNAWTN 672
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL ++R + P D+A SL + V R++G+ A+ +
Sbjct: 673 LGDHRKAISYHEQSLQMKRSIYGEDTAHP----DIADSLNNLGGVWRNLGDHRKAIS-YH 727
Query: 349 EAIKRLESLTLKPEEAGLEQRRLSVLEFLNN 379
E +SL ++ G + + E LNN
Sbjct: 728 E-----QSLQMRRRIYGEDTAHPGISESLNN 753
Score = 43.5 bits (101), Expect = 0.17, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYYGGDL 292
L LG R +GD A++Y S++ ++ +D H +S SLN +G+ GD
Sbjct: 707 LNNLGGVWRNLGDHRKAISYHEQSLQMRRRIYGED--TAHPGISESLNNLGNAWGNLGDH 764
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL +RR + P D+A SL + +G+ A+ ++++++
Sbjct: 765 RKAISYYEQSLQMRRRIYGEDTAHP----DIATSLNNLGTAWGDLGDHRKAISYYEQSLQ 820
Query: 353 RLESL 357
S+
Sbjct: 821 MTRSI 825
Score = 39.3 bits (90), Expect = 3.0, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 206 LSLCTED-IRDQIERMG-NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
L C+E + + + + G NT+ + A LG L +GD AV Y+ S++ M+
Sbjct: 503 LKKCSEQTLHNYLSKYGENTAH--RDVAASLGHLAFALMTLGDHKKAVRYYEQSLQ--MR 558
Query: 264 LPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLD 322
M H ++ SL+ + + GD A YY +SL +RR + P D
Sbjct: 559 WSMFGKGTAHPDIADSLSDLSAAWSFHGDHGKALCYYEQSLQMRRSIYGEDTAHP----D 614
Query: 323 VAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSVLEFLNN 379
+A SL + + R +G+ AV ++ +SL +K G + ++ + LNN
Sbjct: 615 IAASLNNLGEGWRYLGDYRKAVSYYE------QSLLMKLSIYGEDTAHPNIADSLNN 665
>gi|340379459|ref|XP_003388244.1| PREDICTED: e3 ubiquitin-protein ligase CHFR-like [Amphimedon
queenslandica]
Length = 561
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDR 145
L C ICQ +L +C PC+H YC C S + +CP C +E+I + + ++V
Sbjct: 186 LLCQICQEILHDCVSLQPCTHTYCAGCYSDWMSYSNECPSCRLKVERITKNFIVNNLVSA 245
Query: 146 FIEGHARIKR 155
++ + KR
Sbjct: 246 YLRSNPGKKR 255
>gi|291405919|ref|XP_002719174.1| PREDICTED: ring finger protein 110 [Oryctolagus cuniculus]
Length = 314
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|322794453|gb|EFZ17525.1| hypothetical protein SINV_11876 [Solenopsis invicta]
Length = 1378
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK----IEADTTLQD 141
L C++C+ L + + C H +C++CI ++ CP C I K I+AD TLQ+
Sbjct: 14 LICLLCRGYLIDATTVVECLHSFCRSCILKYLSTAAHCPSCKHAINKAKPNIKADKTLQE 73
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 74 IVYKLVPG 81
>gi|260815923|ref|XP_002602722.1| hypothetical protein BRAFLDRAFT_72916 [Branchiostoma floridae]
gi|229288033|gb|EEN58734.1| hypothetical protein BRAFLDRAFT_72916 [Branchiostoma floridae]
Length = 1360
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ A L LG +GD V Y+ +++ MK + + H ++ SLN +G+ +
Sbjct: 925 IAASLNNLGGALSDVGDYRKTVGYYEQALQ--MKWSIYGKDTAHADIASSLNNLGNTWFN 982
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL ++R ++ P +A+SL + + ++G+ AV ++
Sbjct: 983 LGDYRKALSYYEQSLQMKRSIYGENTAHPG----IAISLINLGNTWGALGDHRKAVSYYE 1038
Query: 349 EAIKRLESL----TLKPEEAGL 366
++++ S+ P+ AGL
Sbjct: 1039 QSLQMNRSIYREDAAHPDIAGL 1060
>gi|339522217|gb|AEJ84273.1| polycomb group RING finger protein 5 [Capra hircus]
Length = 235
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ +F+ G
Sbjct: 76 EEIIFKFVPG 85
>gi|339522219|gb|AEJ84274.1| polycomb group RING finger protein 5 [Capra hircus]
Length = 236
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ +F+ G
Sbjct: 76 EEIIFKFVPG 85
>gi|109157341|pdb|2CKL|A Chain A, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 108
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|343781183|pdb|3RPG|B Chain B, Bmi1RING1B-Ubch5c Complex Structure
Length = 117
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|145495334|ref|XP_001433660.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400779|emb|CAK66263.1| unnamed protein product [Paramecium tetraurelia]
Length = 593
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEADTTLQDVVD 144
L C IC LFE PC+H +C +C+S + +CP C A + + T+ ++V+
Sbjct: 180 LQCTICNDYLFEAVAANPCNHHFCGSCLSNWFKKQTYECPNCRAKLTGVMQARTINNLVE 239
Query: 145 RFIEGHARIKRSHT--NSDKEEDEAGEN 170
++++ + KR+ N KEE+ +N
Sbjct: 240 KWLKINPHEKRTEQLLNKMKEENLIYKN 267
>gi|307173961|gb|EFN64691.1| Polycomb complex protein BMI-1 [Camponotus floridanus]
Length = 1468
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C + + C H +C++CI ++ K CP+C + K I D TL
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYLENNKYCPICEVQVHKSRPLLNIRPDHTL 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|148709822|gb|EDL41768.1| polycomb group ring finger 5, isoform CRA_a [Mus musculus]
Length = 206
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAGENK 171
++++ + + G S + K ++E EN+
Sbjct: 76 EEIIFKLVPGLREHDISKVDKSKADEEGDENQ 107
>gi|358334498|dbj|GAA52966.1| polycomb group RING finger protein 2, partial [Clonorchis sinensis]
Length = 119
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADT 137
G L C +C L + + T C HV+C++CI ++ K CPLC + I++ + DT
Sbjct: 15 GHLICGLCGGYLIDATVLTECVHVFCRSCIVKYLTEHKVCPLCQSLIQETRPGHALRPDT 74
Query: 138 TLQDVVDRFIEG 149
LQ VV + + G
Sbjct: 75 VLQRVVYKLVPG 86
>gi|383858055|ref|XP_003704518.1| PREDICTED: uncharacterized protein LOC100879416 [Megachile
rotundata]
Length = 1378
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C + + C H +C++CI ++ K CP+C + K I D TL
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYLENNKYCPICEVQVHKSKPLLNIRPDHTL 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|148675578|gb|EDL07525.1| mCG120273 [Mus musculus]
Length = 290
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI R+ K CP+C + K I ++ TL
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLESSKYCPICDVQVHKTRPLLNIRSNKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|307207694|gb|EFN85331.1| Polycomb complex protein BMI-1 [Harpegnathos saltator]
Length = 1474
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C + + C H +C++CI ++ K CP+C + K I D TL
Sbjct: 19 LTCRLCGGYFIDATTIIECLHSFCRSCIVKYLENNKYCPICEVQVHKSKPLLNIRPDHTL 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|260834388|ref|XP_002612193.1| hypothetical protein BRAFLDRAFT_88936 [Branchiostoma floridae]
gi|229297567|gb|EEN68202.1| hypothetical protein BRAFLDRAFT_88936 [Branchiostoma floridae]
Length = 1317
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-------TLSVSLNKI 282
+ + L LG+ R +GD A++Y+ S++ MK + D EII+ ++ SLN +
Sbjct: 791 IASSLNNLGNARRDLGDHRKAISYYEQSLQ--MKRIIYDEEIIYGEDTAHPDIASSLNNL 848
Query: 283 GDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDV 342
G+ GD + A SYY +SL ++R + P D+A SL + + R++G+
Sbjct: 849 GNAWSDLGDYRKAISYYEQSLQMKRIIYGEDTAHP----DIANSLNNLGNTWRALGDHRN 904
Query: 343 AVDGFQEAIK 352
A+ ++++++
Sbjct: 905 AISYYEQSLQ 914
Score = 42.7 bits (99), Expect = 0.28, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG+ RA+GD A++Y+ S++ M+ + + H ++ SLN +G+ GD
Sbjct: 889 LNNLGNTWRALGDHRNAISYYEQSLQ--MRQIIYGEDTAHPAIADSLNNLGNAWSDLGDY 946
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL ++R + P D+A SL + + +G+ A+ ++++++
Sbjct: 947 RKAISYYEQSLQMKRIIYGEDTAHP----DIANSLNNLGNAWSDLGDHRKAISYYEQSLQ 1002
Score = 38.1 bits (87), Expect = 7.4, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG+ +GD A++Y+ S++ MK + + H ++ SLN +G+ GD
Sbjct: 1065 LNNLGNAWSDLGDNRKAISYYEQSLQ--MKRIIYGKDTAHPDIANSLNNLGNALSDLGDN 1122
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL ++R + + P D+A SL + +G+ A+ ++++++
Sbjct: 1123 RKAISYYEQSLQMKRIIYGKDTAHP----DIADSLNNLGAAWSDLGDHRKAISYYEQSLQ 1178
>gi|21226257|ref|NP_632179.1| hypothetical protein MM_0155 [Methanosarcina mazei Go1]
gi|20904496|gb|AAM29851.1| conserved protein [Methanosarcina mazei Go1]
Length = 601
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 221 GNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSV 277
GNT+ Q G V MLG GD+ A Y ++E L +L +DL + +S
Sbjct: 109 GNTT-YVRQQGKVYRMLGRAFYEAGDSGKAAQYAGKALEILRELAGKNPEDLHYQYEISD 167
Query: 278 SLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSI 337
+G L GD++ A+ +++ +N+ R+ +R ++A +L ++ +
Sbjct: 168 DFTGLGKLFEDIGDIERAKECHMQEINIYRNIHERDPEDEVSEANIAATLDRIGHLYAGK 227
Query: 338 GNEDVAVDGFQEAIKRLESLTLK-PEEAGLEQRRLSVLEFLNNQLSEKPPESTPK 391
G + A +++ ++ E L+ PE+ E + L ++ Q S+ PE+ K
Sbjct: 228 GETETAKQYYEQGLEAYEKLSESYPEDIDHEVGIANTLGYIGKQYSDPEPETALK 282
>gi|387017720|gb|AFJ50978.1| Polycomb complex protein BMI-1-like [Crotalus adamanteus]
Length = 327
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C+IC + + C H +CK CI + K CP+C + K I +D TL
Sbjct: 16 LMCVICGGYFIDATTIIECLHSFCKTCIVHYLESSKYCPICDVQVHKTRPLLNIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|71027873|ref|XP_763580.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350533|gb|EAN31297.1| hypothetical protein TP03_0552 [Theileria parva]
Length = 735
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 78 FGYDAQ---SFKIGPLSCMICQALLFECSKCTPCSHVYCKAC--ISRFKD---CPLCGAD 129
+G D + + I L+C +C+ L C H +CK+C +S F++ CP C +
Sbjct: 255 YGLDVRFNLTILIDILTCPLCKGLFHNAQTIRDCMHTFCKSCLILSTFENGLVCPTCFSP 314
Query: 130 I-----EKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKK 172
I E +E DT +Q +VD+ A+ N K DE E KK
Sbjct: 315 ILSSITEGVEPDTNIQTIVDKLFPHFAQ------NEQKLIDEMKERKK 356
>gi|344277626|ref|XP_003410601.1| PREDICTED: COMM domain-containing protein 3-like isoform 1
[Loxodonta africana]
Length = 469
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +CK CI + K CP+C + K I +D TL
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVHYLETSKYCPICDVQVHKTRPLLNIRSDKTL 218
Query: 140 QDVVDRFIEGHAR--IKR------SHTNSD----KEEDE---AGENKKVIYED 177
QD+V + + G + +KR +H ++D ED A E+K++I +D
Sbjct: 219 QDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEDKRIITDD 271
>gi|226479844|emb|CAX73218.1| Polycomb group RING finger protein 3 [Schistosoma japonicum]
Length = 246
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C+ L + T C H +CK+CI ++ ++CP+CG I + + D TL
Sbjct: 20 ITCKLCKGYLIDAVSITECLHSFCKSCIVKYSEEKRECPVCGILIHQSHPLNYMSFDRTL 79
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 80 QDIVYKIV 87
>gi|293331779|ref|NP_001168287.1| uncharacterized LOC100382051 [Zea mays]
gi|223947229|gb|ACN27698.1| unknown [Zea mays]
gi|414877923|tpg|DAA55054.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 486
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGAD-----IEKIEADTT 138
L+C +C LL + + + C H +C+ CI + CP+C D +EK+ AD
Sbjct: 82 LTCPLCDHLLRQATTISECLHTFCRKCIYKKLNDEDLDHCPVCKIDLGCTPVEKLRADHN 141
Query: 139 LQDVVDRFIEGHARIKRSHTNSDKEE 164
+QDV +F KR N+++ E
Sbjct: 142 IQDVRSKFFP----FKRKKVNAEEAE 163
>gi|452208774|ref|YP_007488888.1| hypothetical protein MmTuc01_0161 [Methanosarcina mazei Tuc01]
gi|452098676|gb|AGF95616.1| hypothetical protein MmTuc01_0161 [Methanosarcina mazei Tuc01]
Length = 785
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 221 GNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSV 277
GNT+ Q G V MLG GD+ A Y ++E L +L +DL + +S
Sbjct: 287 GNTT-YVRQQGKVYRMLGRAFYEAGDSGKAAQYAGKALEILRELAGKNPEDLHYQYEISD 345
Query: 278 SLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSI 337
+G L GD++ A+ +++ +N+ R+ +R ++A +L ++ +
Sbjct: 346 DFTGLGKLFEDIGDIERAKECHMQEINIYRNIHERDPEDEVSEANIAATLDRIGHLYAGK 405
Query: 338 GNEDVAVDGFQEAIKRLESLTLK-PEEAGLEQRRLSVLEFLNNQLSEKPPESTPK 391
G + A +++ ++ E L+ PE+ E + L ++ Q S+ PE+ K
Sbjct: 406 GETETAKQYYEQGLEAYEKLSESYPEDIDHEVGIANTLGYIGKQYSDPEPETALK 460
>gi|431838990|gb|ELK00919.1| Putative E3 ubiquitin-protein ligase HECTD2 [Pteropus alecto]
Length = 951
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|291237540|ref|XP_002738692.1| PREDICTED: super sex combs-like [Saccoglossus kowalevskii]
Length = 1801
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 115/263 (43%), Gaps = 28/263 (10%)
Query: 109 SHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG----HARIKRSHTNSDKEE 164
SH A +S DC D +K A T + I G H +I ++ N+
Sbjct: 1170 SHPETAALLSNLADCYAILGDSKKALAFHTHSLNMYHDIYGANASHIKIASAYNNTGNAW 1229
Query: 165 DEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKS--RLSLCTE---DIRDQIER 219
+ G++KK + R A ++ + + ++ + A S L + E D+ ++
Sbjct: 1230 NVMGDHKKAAH----YHRKALEMKHKIYGEKTEHPDVAASLHNLGVAMEAMGDLNGAFDK 1285
Query: 220 MGNTSELCSQ----------LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDL 269
+ E+ + + L +G+ A G + A+ Y + ++ + KL +
Sbjct: 1286 YNRSFEMKNYYYGQHSAHPDIAVSLMNMGNIKAATGACELAMGYLSQAMA-MYKLMYGED 1344
Query: 270 EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAK 329
+++ L+ IG+L Y G + A +YY ++L ++R A K+H + P D+A +L
Sbjct: 1345 AAHPSIANCLSSIGNLYEYSGSYETAVTYYKQALEMKRVAYKKHVSHP----DIAATLNN 1400
Query: 330 VADVDRSIGNEDVAVDGFQEAIK 352
+ S+G + +++ + EA++
Sbjct: 1401 LGSTFDSLGKYEKSIECYLEALE 1423
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 221 GNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLN 280
GNT + + + L +G+ ++GD +AA+ Y+ +++ + + + S SL
Sbjct: 1650 GNTDNV--DIASALSNIGNAIESIGDNNAAIDYYEQTLQMYRNIHGQGVSHVDVAS-SLY 1706
Query: 281 KIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNE 340
IG + + A SYY ++L + R+ + + P V L + S+GN
Sbjct: 1707 NIGSAYDESKEFRKAISYYEQALIMGREVFGQKTEHPL----VMSCLHSLGLAWESLGNH 1762
Query: 341 DVAVDGFQEAIKRLESLTL 359
D A D F+EA++ L S+ L
Sbjct: 1763 DKAKDYFEEALQILRSVQL 1781
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 215 DQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT 274
D R+ N E+ + + L LG+ A+ + + +V D +E KL + + +
Sbjct: 1555 DMYRRLSNDEEVTTDIANALSNLGNDYAAIDNYEKSVECHKDGLEIFKKLASEGGDSLDV 1614
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
S +L +G++ GD A + ++L + RD H N + +D+A +L+ + +
Sbjct: 1615 AS-ALTNLGNVCDSMGDYVKAMECHKQALGIYRDI---HGNTDN--VDIASALSNIGNAI 1668
Query: 335 RSIGNEDVAVDGFQEAIKRLESL 357
SIG+ + A+D +++ ++ ++
Sbjct: 1669 ESIGDNNAAIDYYEQTLQMYRNI 1691
>gi|56753730|gb|AAW25062.1| SJCHGC01341 protein [Schistosoma japonicum]
Length = 246
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C+ L + T C H +CK+CI ++ ++CP+CG I + + D TL
Sbjct: 20 ITCKLCKGYLIDAVSITECLHSFCKSCIVKYSEEKRECPVCGILIHQSHPLNYMSFDRTL 79
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 80 QDIVYKIV 87
>gi|440793115|gb|ELR14310.1| FHA domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 553
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD-----CPLCGADIEKIEADTTLQDVVD 144
+ C ICQ LL++C PC H +C C S +++ CP C ++ + + T+ +++
Sbjct: 234 MVCGICQELLYKCVALFPCMHNFCACCYSEWRERGNSQCPQCRTHVQGLSKNHTICAIIE 293
Query: 145 RFIEGH 150
+IE +
Sbjct: 294 SYIEAN 299
>gi|78188843|ref|YP_379181.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78171042|gb|ABB28138.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 567
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFAD----SVEFLMKLPMDDLEIIHTL 275
+ N +++ QL A+ +G+ A G+ D A+++ A+ S E P +++ + L
Sbjct: 352 LRNCTDVEYQLAALADRIGNYHTATGNLDKALSFHAECLRLSKELYEAYP-NNVFFKNGL 410
Query: 276 SVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDR 335
++S K+G+ G+L A +YY + + ++ + + N S +AVS +K +
Sbjct: 411 AISYEKLGNTHTSLGNLDKALTYYEQYYKLSKELYEAYPNNVSFKFGLAVSYSKFGNTHT 470
Query: 336 SIGNEDVAVDGFQEAIKRLESL 357
S+GN D A+ + + E L
Sbjct: 471 SLGNLDKALSYYDNETRLFEEL 492
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 198 NVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFAD- 256
N++ A S + C ++ E N + L LG+ ++G+ D A+ Y+
Sbjct: 378 NLDKALSFHAECLRLSKELYEAYPNNVFFKNGLAISYEKLGNTHTSLGNLDKALTYYEQY 437
Query: 257 ---SVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRH 313
S E P +++ L+VS +K G+ G+L A SYY + + + +
Sbjct: 438 YKLSKELYEAYP-NNVSFKFGLAVSYSKFGNTHTSLGNLDKALSYYDNETRLFEELYEAY 496
Query: 314 SNVPSQVLDVAVSLAKVADVDRSIGNE-DVAVDGFQEAIKRL-ESLTLKPEEAGLEQRRL 371
N S +A+S + + R N+ D+ + FQ+A K E ++ P+ A +Q
Sbjct: 497 PNNVSFKNGLAISYSALGQFYRDHRNDSDIVKNYFQQAEKVWAELVSSSPQHAEFKQN-- 554
Query: 372 SVLEFLNNQL 381
L ++ NQL
Sbjct: 555 --LSWVKNQL 562
>gi|118356197|ref|XP_001011357.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89293124|gb|EAR91112.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1662
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKY 287
Q+ L +G C +GD + A+ Y +S+E ++ + H +++SLN +G +
Sbjct: 1122 QIAIALDSIGSCFIYLGDYEKALEYTQESIEMRKQI----YQKTHPDIALSLNNVGSCYF 1177
Query: 288 YGGDLQAARSYYVRSLNVRRDAVKR-HSNVPSQVLDVAVSLAKVADVDRSI 337
+ GD + + Y+++SL +R+ K H + + +V SL K+ D +++
Sbjct: 1178 HLGDFKKSLQYFLQSLQMRQQIFKEVHPQIAESLDNVGASLQKLGDHQKAL 1228
Score = 41.6 bits (96), Expect = 0.75, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L ++G C +G+ A+ Y+ S++ + K D I +++SLN +G D Q
Sbjct: 1505 LDIIGKCLMNLGNYKEALEYYQQSLQ-MYKQIYKDTPISLAVAMSLNNVGSCYQNLLDYQ 1563
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
A Y+V SL + + K N P VA+SL V ++G+ A+D E ++
Sbjct: 1564 KALDYFVESLKMFKQIYK--DNHPH----VAISLNNVGQCYENLGDNKKALDYMLECLQ 1616
Score = 37.7 bits (86), Expect = 9.3, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 211 EDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLE 270
ED +QI E+ A L + C +GD+ + F S++ ++ +
Sbjct: 1023 EDTHNQISIEKKQEEI----AATLNNVALCFANLGDSKKGLECFLKSLQIKQQI----FK 1074
Query: 271 IIH--TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
IH +++SLN +G GD Q + YY+ SL + ++ K+ N P +A++L
Sbjct: 1075 QIHHPLIALSLNNLGSCYKNLGDYQMSLQYYLESLQMIKNIFKK--NHPQ----IAIALD 1128
Query: 329 KVADVDRSIGNEDVAVDGFQEAIK 352
+ +G+ + A++ QE+I+
Sbjct: 1129 SIGSCFIYLGDYEKALEYTQESIE 1152
>gi|268573548|ref|XP_002641751.1| Hypothetical protein CBG10090 [Caenorhabditis briggsae]
Length = 458
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRFKD-----CPLCGADIEKIEADTTLQDVVD 144
C IC A L+ C+PC H +C CI ++ D CP+C + I + ++++VD
Sbjct: 24 CSICMATLYNAVSCSPCLHTFCAGCIVQWTDQNASKCPMCRIAVLDISPNCMMRELVD 81
>gi|320164459|gb|EFW41358.1| checkpoint with forkhead and ring finger domains [Capsaspora
owczarzaki ATCC 30864]
Length = 532
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDR 145
L C IC +L +C PC H +C AC S + DCP C A + I + ++++ +
Sbjct: 175 LQCGICMEILHDCVSVVPCLHDFCGACYSDWMEKKSDCPTCRAKVTSISRNHRIKNLCES 234
Query: 146 FIEGHARIKR 155
F+ H +R
Sbjct: 235 FLAEHPEKRR 244
>gi|291230597|ref|XP_002735252.1| PREDICTED: ring finger protein 110-like [Saccoglossus kowalevskii]
Length = 345
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 28/116 (24%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +C+ CI R+ K CP+C + K I D TL
Sbjct: 66 LMCVLCGGYFIDATTIIECLHSFCRTCIIRYLESSKYCPVCDTQVHKTRPLQYIRPDRTL 125
Query: 140 QDVVDRFIEG-----------------HARIKRSHTNSDKEEDEAGE-NKKVIYED 177
Q++V + + G A+ K +H S + +E GE N+ +Y+D
Sbjct: 126 QNIVYKLVPGLFRDEMKRRREYYAANPSAKSKPTHRFSRQNAEERGEVNEMFMYKD 181
>gi|431890708|gb|ELK01587.1| Polycomb group RING finger protein 2 [Pteropus alecto]
Length = 144
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|399216056|emb|CCF72744.1| unnamed protein product [Babesia microti strain RI]
Length = 428
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADI-----EKIEADTTL 139
L+C +C+ L F C H +CK+CI + + CP+C +I E IE D +
Sbjct: 186 LTCKLCKGLFFNAYTIKNCLHTFCKSCIITYAILVGQQCPVCHQNINTNLEESIEYDNCI 245
Query: 140 QDVVDRFI 147
Q +VD+
Sbjct: 246 QSMVDKLF 253
>gi|260814970|ref|XP_002602186.1| hypothetical protein BRAFLDRAFT_121480 [Branchiostoma floridae]
gi|229287493|gb|EEN58198.1| hypothetical protein BRAFLDRAFT_121480 [Branchiostoma floridae]
Length = 1668
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L +G+ +GD AV+YF ++E + +D ++ LN +G K +G
Sbjct: 807 IAASLNNMGNAWGNLGDHRKAVSYFDQALEMRRSICGED-NAHPDIATLLNNLG--KAWG 863
Query: 290 --GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
GD + A SYY ++L +RR + P D+A SL + + R++G++ +A+ +
Sbjct: 864 NLGDHRKAFSYYDQALEMRRSIYGEDTAHP----DIAASLNNLGEAWRNLGDQRIAISYY 919
Query: 348 QEAIKRLESL 357
++A++ + +
Sbjct: 920 EQALEMMRGI 929
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L LG+ R +GD A++Y+ ++E +M+ + ++ SLN +G++
Sbjct: 895 IAASLNNLGEAWRNLGDQRIAISYYEQALE-MMRGIYGEGNAHPDIAGSLNNLGNVWGNL 953
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY ++L + R +++ P D+A SL + + +G+ A+ +++
Sbjct: 954 GDHRKAISYYEQALEMTRSTYGKNTAHP----DIAGSLNNLGNAWGDLGDNRKAISYYEQ 1009
Query: 350 AIKRLESL 357
+++ + S+
Sbjct: 1010 SLQMMRSV 1017
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ L LG+ +GD A++Y+ S++ + + +D ++ SLN +G+
Sbjct: 983 IAGSLNNLGNAWGDLGDNRKAISYYEQSLQMMRSVYGED-NAHPDIAGSLNNMGNAWGNL 1041
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY ++L +RR + P D+A L + + ++G+ A+ +++
Sbjct: 1042 GDHRKAVSYYDQALEMRRSIFGEDNAHP----DIADLLYNMGNAWGNLGDHRKAISYYEQ 1097
Query: 350 AIKRLESL 357
A++ + S+
Sbjct: 1098 ALQMMRSI 1105
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
+G+ C +GD A++Y+ S++ L + +D H ++ SLN +G+ GD + A
Sbjct: 770 MGNACSDLGDNGRAISYYEQSLQMLRSVYGED--TAHPDIAASLNNMGNAWGNLGDHRKA 827
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
SY+ ++L +RR + P D+A L + ++G+ A + +A++
Sbjct: 828 VSYFDQALEMRRSICGEDNAHP----DIATLLNNLGKAWGNLGDHRKAFSYYDQALEMRR 883
Query: 356 SL 357
S+
Sbjct: 884 SI 885
>gi|256084336|ref|XP_002578386.1| RING finger protein [Schistosoma mansoni]
Length = 246
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C+ L + T C H +CK+CI ++ ++CP+CG I + + D TL
Sbjct: 20 ITCKLCKGYLIDAVSITECLHPFCKSCIVKYSEEKRECPVCGILIHQSHPLNYMSFDRTL 79
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 80 QDIVYKIV 87
>gi|255551951|ref|XP_002517020.1| ring finger protein, putative [Ricinus communis]
gi|223543655|gb|EEF45183.1| ring finger protein, putative [Ricinus communis]
Length = 434
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGAD-----IEKIEADTT 138
++C +C L + + + C H +C+ CI R F +CP+C D +EK+ AD +
Sbjct: 19 MTCPLCNKLFRDATTISECLHTFCRKCIYRKITDEEFDNCPVCNIDLGCSPLEKLRADHS 78
Query: 139 LQDVVDRFI 147
L+D+ +F
Sbjct: 79 LEDLKTKFF 87
>gi|340500477|gb|EGR27350.1| hypothetical protein IMG5_197350 [Ichthyophthirius multifiliis]
Length = 508
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDV 142
I L C ICQ +LF+C PC H +C CIS CP C + ++ + +
Sbjct: 164 IEKLKCGICQNILFQCITVNPCLHNFCGGCISELIIKEDQCPQCKNQMTFLKKNIIINQQ 223
Query: 143 VDRFIEGHARIKR 155
+ ++E + + KR
Sbjct: 224 IKNYLEQNPQKKR 236
>gi|312198613|ref|YP_004018674.1| hypothetical protein FraEuI1c_4814 [Frankia sp. EuI1c]
gi|311229949|gb|ADP82804.1| Tetratricopeptide repeat protein [Frankia sp. EuI1c]
Length = 393
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 16/127 (12%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKL------------PMDDLEIIHTLSVSLNKIGD 284
+GD R GD+ A+ + + V + P + H+LS+ +G+
Sbjct: 214 VGDMLRLRGDSPGALVRYNEGVATARRALNAASAGGTDIDPTVPRALFHSLSL----VGN 269
Query: 285 LKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAV 344
++Y GD+ A Y SL + R + P+ + D++V L KVA ++G+ VA
Sbjct: 270 MRYDQGDVAGALESYDESLKLVRWLRTEYGEHPTVLRDLSVGLDKVAGAKEALGDLPVAA 329
Query: 345 DGFQEAI 351
DGF+EA+
Sbjct: 330 DGFEEAL 336
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
L+ +L KIGDL+ GD +AA Y +L VRR + + V + D++ L V D+
Sbjct: 159 LANTLEKIGDLRQQQGDTKAALDAYSEALEVRRGLLTVYGEVAPLLRDISRGLLDVGDML 218
Query: 335 RSIGNEDVAVDGFQEAI 351
R G+ A+ + E +
Sbjct: 219 RLRGDSPGALVRYNEGV 235
>gi|260814954|ref|XP_002602178.1| hypothetical protein BRAFLDRAFT_76866 [Branchiostoma floridae]
gi|229287485|gb|EEN58190.1| hypothetical protein BRAFLDRAFT_76866 [Branchiostoma floridae]
Length = 1648
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +L +G+ C +GD A++Y+ S++ M+ + + H ++ SLN +G+
Sbjct: 970 IAILLNNMGNACSDLGDYGKAISYYEQSLQ--MRRSIYGEDTAHPEIAYSLNNMGNAWSN 1027
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL +RR + P ++A SL + + S+G+ A+ ++
Sbjct: 1028 LGDHRKAISYHEQSLQMRRSIYGEDTAHP----NIAASLNNLGAIWSSLGDHRKAISYYE 1083
Query: 349 EAIK 352
+A++
Sbjct: 1084 QALQ 1087
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ A L LG+ +GD A++Y+ +++ + +D H+ ++ SLN +G+
Sbjct: 1125 IAASLNNLGNAWSNLGDHRKAISYYEQALQMNRSIYGED--TAHSDIAASLNNLGNAWSN 1182
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L + R + P D+A SL + + ++G+ A+ ++
Sbjct: 1183 LGDHRKAISYYEQALQMNRSIYGEDTAHP----DIATSLNNMGNAWSNLGDHRKAISYYE 1238
Query: 349 EAIKRLESL 357
+A++ S+
Sbjct: 1239 QALQMNRSI 1247
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
LG+ +GD + A+ YF S++ M+ + E H + SLN +G + GD A
Sbjct: 889 LGEAWSFLGDHEKALCYFEQSLQ--MRRSIYGEETAHPDIFESLNNMGIAWFNLGDYTKA 946
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
SYY +SL + R P D+A+ L + + +G+ A+ ++++++
Sbjct: 947 VSYYKQSLQITRRIYGEDIAHP----DIAILLNNMGNACSDLGDYGKAISYYEQSLQMRR 1002
Query: 356 SL----TLKPEEA 364
S+ T PE A
Sbjct: 1003 SIYGEDTAHPEIA 1015
>gi|351706754|gb|EHB09673.1| Polycomb group RING finger protein 2 [Heterocephalus glaber]
Length = 452
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 68 DSASIPPKCPFGYDAQSFKIGPLS----CMICQALLFECSKCTPCSHVYCKACISRF--- 120
D+ S PP + KI L+ C +C + + C H +CK CI R+
Sbjct: 116 DTPSPPPHPSIMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET 175
Query: 121 -KDCPLCGADI------EKIEADTTLQDVVDRFIEG 149
K CP+C + E +D TLQD+V + + G
Sbjct: 176 NKYCPMCDVPVLACGLGESRGSDKTLQDIVYKLVPG 211
>gi|332027981|gb|EGI68032.1| Polycomb complex protein BMI-1 [Acromyrmex echinatior]
Length = 1426
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C + + C H +CK+CI ++ K CP+C + K I D L
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCKSCIVKYLENNKYCPICEVQVHKSRPLLNIRPDYIL 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|260826333|ref|XP_002608120.1| hypothetical protein BRAFLDRAFT_91402 [Branchiostoma floridae]
gi|229293470|gb|EEN64130.1| hypothetical protein BRAFLDRAFT_91402 [Branchiostoma floridae]
Length = 1394
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +L LG R +GD A++Y+ +++ MK + +H ++ SLN +G+
Sbjct: 945 IAELLNNLGGAWRTLGDHKKAISYYEQALQ--MKWSIYGEGTVHPDIAGSLNNLGNAWGN 1002
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL +RR + P ++A SL + ++G+ AV ++
Sbjct: 1003 LGDHRKAGSYYEKSLQMRRIVYGEDTAHP----EIASSLHNLGGAWSNVGDHRKAVSYYE 1058
Query: 349 EAI 351
A+
Sbjct: 1059 SAL 1061
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L L R++GD AV+Y+A S++ MK + + H ++ SLN +G
Sbjct: 857 VAASLDNLAFALRSLGDHRKAVSYYAQSLQ--MKQSIFGEDTAHPDIANSLNNLGCAWNA 914
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY SL + + + P D+A L + R++G+ A+ ++
Sbjct: 915 LGDHKKAVSYYQHSLQMMLSIYGKETAHP----DIAELLNNLGGAWRTLGDHKKAISYYE 970
Query: 349 EAIKRLESL----TLKPEEAG 365
+A++ S+ T+ P+ AG
Sbjct: 971 QALQMKWSIYGEGTVHPDIAG 991
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG R +GD AV+Y S++ M + + H ++ SLN +G+
Sbjct: 1077 IATTLNKLGAALRNLGDHRQAVSYLEQSLQ--MHWSIYGKDTAHPDIASSLNNLGNAWSD 1134
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
D + A SYY +SL +++ + P D+A SL + IG+ A+ ++
Sbjct: 1135 LEDYRKAVSYYEKSLQMKQVIYGKDIAHP----DIASSLNNIGGAWSLIGDHRKAITYYE 1190
Query: 349 EAIKRLESL 357
+++K +S+
Sbjct: 1191 QSLKMNQSI 1199
>gi|308811152|ref|XP_003082884.1| Pex10p (ISS) [Ostreococcus tauri]
gi|116054762|emb|CAL56839.1| Pex10p (ISS) [Ostreococcus tauri]
Length = 402
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Query: 39 DDAASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFG--YDAQSFKIGPLSCMICQ 96
D +A R+A EN E DG A+ +D+A PP+ FG D P S I
Sbjct: 285 DASAERRARENRV---LESDGTPAREVVVDAAPDPPRDVFGNVIDVPGTSAKPSSASISP 341
Query: 97 ALLFECSKC---------TPCSHVYCKACISRFK----DCPLCGADIEKIEADTTLQDVV 143
+ +C+ C TPC HV+C C++ + +CPLC A TT Q +V
Sbjct: 342 LVAAKCALCLSQRRAPTATPCGHVFCWRCVAGWASKKPECPLC-------RAPTTPQSLV 394
>gi|443709808|gb|ELU04313.1| hypothetical protein CAPTEDRAFT_223896 [Capitella teleta]
Length = 549
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFK-------DCPLCGADIEKIEADTTLQDV 142
L+C +C L + KC PC HVYC C+ R + CPLC I K D L
Sbjct: 274 LTCSVCLELYYHPHKCEPCKHVYCGPCLRRLRASTPFNTKCPLCREIIWKCLPDDNLDST 333
Query: 143 V 143
V
Sbjct: 334 V 334
>gi|345560619|gb|EGX43744.1| hypothetical protein AOL_s00215g480 [Arthrobotrys oligospora ATCC
24927]
Length = 1027
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 71 SIPPKCPFGYDAQSFKIGPL-----------SCMICQALLFECSKCTPCSHVYCKACISR 119
SI P P YD + +I L +C++CQ LLFE C HV+C +C+
Sbjct: 109 SISPPAPV-YDPRDDQIKDLQTDLAKLQKCATCVVCQDLLFEPYSLG-CGHVFCYSCLRD 166
Query: 120 F----KDCPLCGADIEKIEADTTL-QDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVI 174
+ + CP C A + A L +D++D F++ ++ H + + + E +++
Sbjct: 167 WFRQKRTCPECRARVRHQPAPAYLIRDMIDTFVQ-RTILQSPHEEGETLKQQKEEALRMV 225
Query: 175 YEDVSMERGAF 185
D S RG F
Sbjct: 226 EADKSDPRGLF 236
>gi|348536470|ref|XP_003455719.1| PREDICTED: hypothetical protein LOC100707220 [Oreochromis
niloticus]
Length = 491
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C +C+ L + + T C H +CK+CI + DCP CG + E + D TL
Sbjct: 262 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEESNDCPKCGIQVHETNPLEMLRLDNTL 321
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 322 EEIIFKLVPG 331
>gi|260816982|ref|XP_002603366.1| hypothetical protein BRAFLDRAFT_80359 [Branchiostoma floridae]
gi|229288685|gb|EEN59377.1| hypothetical protein BRAFLDRAFT_80359 [Branchiostoma floridae]
Length = 995
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 221 GNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLN 280
G T EL G MLG+ C+ +GD AV+Y S+E +M+ + ++ SLN
Sbjct: 602 GKTCELIRTPG---NMLGEACQNIGDHKKAVSYHEQSLE-MMRTTYGENTAHPDIASSLN 657
Query: 281 KIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNE 340
+G+ GD + A SY+ S+ + R ++ P +A SL + + R +G+
Sbjct: 658 NLGNAWSDLGDYKKAVSYHELSIQMTRTIYGENTAHPH----IATSLNNLGNAWRDLGDY 713
Query: 341 DVAVDGFQEAIKRLESLT 358
AV + E ++E +T
Sbjct: 714 RKAVS-YHEQSLQMERIT 730
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG+ R +GD A++Y S++ MK + +H ++ SLN +G
Sbjct: 784 IAASLNNLGNAWRHLGDHKKAISYHEQSLQ--MKRIIYGANTVHPDIASSLNNLGVAWMD 841
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL +RR +++ P D+A SL + + +G+ + + +
Sbjct: 842 LGDHRKAISYHEQSLQMRRIIYGKNTAHP----DIASSLNNLGNALMDLGDYQKSANHHE 897
Query: 349 EAIK 352
++++
Sbjct: 898 QSLQ 901
>gi|145530678|ref|XP_001451111.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418755|emb|CAK83714.1| unnamed protein product [Paramecium tetraurelia]
Length = 525
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 32 PFSKARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFK--IGP 89
P + +P++ + + + K H D+ +S + + + Q F+
Sbjct: 89 PLDRVQPEEIIGFQFLTDKIKDSRSH-SDEIQSINHNKSKDEIVSKLNTHNQQFEELADE 147
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF------KDCPLCGADIEKIEADTTLQDVV 143
L C IC LFE PC+H +C AC+S + DCP C I+ I + ++V
Sbjct: 148 LICTICNDYLFEAVTTNPCNHHFCGACLSTWLEKQLHNDCPNCRVSIKSIMIARMMNNLV 207
Query: 144 DRFIE 148
+++++
Sbjct: 208 EKWLK 212
>gi|291228047|ref|XP_002733991.1| PREDICTED: lethal (3) 73Ah-like [Saccoglossus kowalevskii]
Length = 220
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC + + T C H +CK+CI R+ + CP CG I + I D T+
Sbjct: 14 ITCRICHGYFIDATTITECLHTFCKSCIVRYLEEHNTCPTCGIVIHQSHPLHYIGHDRTM 73
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 74 QDIVYKLV 81
>gi|405952037|gb|EKC19894.1| Polycomb group RING finger protein 3 [Crassostrea gigas]
Length = 1074
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C+ L E + T C H +CK+CI + K+CP C I + I D T+
Sbjct: 15 ICCTLCKGYLVEATTITECLHTFCKSCIVGYLKKEKNCPKCDILIHQSHPLNYISHDRTM 74
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 75 QDIVYKLV 82
>gi|260793866|ref|XP_002591931.1| hypothetical protein BRAFLDRAFT_79530 [Branchiostoma floridae]
gi|229277144|gb|EEN47942.1| hypothetical protein BRAFLDRAFT_79530 [Branchiostoma floridae]
Length = 556
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 79 GYDAQSFKIGPLSCMICQALLFECSK----CTPCSHVYCKACISRFKDCPLCGADIEKIE 134
G +Q I C +C +L+ PC H +C AC+ CP CG ++ +
Sbjct: 291 GQVSQETSIDTHKCQVCSSLMVPPDHRPMLVIPCGHTFCSACVRHTDTCPGCGQEVSSLT 350
Query: 135 ADTTLQDVVDRFIEGHARIKRSHTN 159
+ LQ ++ + R H+N
Sbjct: 351 CNIMLQQIIMEYKSKRKPKTRDHSN 375
>gi|260815994|ref|XP_002602757.1| hypothetical protein BRAFLDRAFT_93703 [Branchiostoma floridae]
gi|229288069|gb|EEN58769.1| hypothetical protein BRAFLDRAFT_93703 [Branchiostoma floridae]
Length = 2103
Score = 47.4 bits (111), Expect = 0.012, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG+ +GD A++Y+ ++E MKL + + H ++ SLN +GD
Sbjct: 1014 IAGSLNNLGNAWSNLGDHRKAISYYEQALE--MKLSIYGEDTAHPDIAASLNNMGDTWSN 1071
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L ++ + P D+A SL + + R++G+ A+ ++
Sbjct: 1072 LGDNRKAISYYEQALEMKLSIYGEDTAHP----DIAASLNNMGNAWRNLGDNRKAISYYE 1127
Query: 349 EAIKRLESL 357
+A++ S+
Sbjct: 1128 QALEMNRSI 1136
Score = 47.0 bits (110), Expect = 0.014, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L +G+ R +GD A++Y+ ++E + +D ++ SLN +G+
Sbjct: 1203 IAASLNNMGNAWRNLGDHRKAISYYEQALEMRRSICGED-NAHPNIAASLNNLGNAWGNL 1261
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY ++L +RR + + P D+A SL + ++G A+ +++
Sbjct: 1262 GDHRKAISYYEQALEMRRSTYGKRTAHP----DIASSLNNLGGAWTNLGGHRKAISYYEQ 1317
Query: 350 AIKRLESL 357
A++ S+
Sbjct: 1318 ALEMRRSI 1325
Score = 46.2 bits (108), Expect = 0.025, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L +GD +GD A++Y+ ++E MKL + + H ++ SLN +G+
Sbjct: 1058 IAASLNNMGDTWSNLGDNRKAISYYEQALE--MKLSIYGEDTAHPDIAASLNNMGNAWRN 1115
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAV 344
GD + A SYY ++L + R + P D+A SL + + R++G+ AV
Sbjct: 1116 LGDNRKAISYYEQALEMNRSIYGEDTAHP----DIAASLNNMGNAWRNLGDHRKAV 1167
Score = 44.3 bits (103), Expect = 0.10, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG R +GD A++Y+ ++E MK + + H ++ SLN +G+ + GD
Sbjct: 930 LNNLGGAWRNLGDHRKAISYYEQALE--MKRGIYGEDNAHPDIADSLNNLGNARGDLGDN 987
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
A SYY +SL +RR + P D+A SL + + ++G+ A+ +++A++
Sbjct: 988 SKAISYYEQSLQMRRSIYGEDTAHP----DIAGSLNNLGNAWSNLGDHRKAISYYEQALE 1043
Score = 43.5 bits (101), Expect = 0.17, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L LG+ +GD A++Y+ ++E + +D ++ SLN +GD
Sbjct: 1379 IAASLNNLGNAWGDLGDHRKAISYYEQALEMRRSIYGED-NAHPNIAASLNNLGDAWGNL 1437
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
G + A SYY ++L +RR + + P D+A SL + ++G A+ +++
Sbjct: 1438 GGHRKAISYYEQALEMRRSTYGKRTAHP----DIASSLNNLGGAWSNLGGHRKAISYYEQ 1493
Query: 350 AIKRLESL 357
A++ S+
Sbjct: 1494 ALEMRRSI 1501
Score = 40.0 bits (92), Expect = 2.1, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD A++Y+ S++ + + +D H ++ SLN +G GD
Sbjct: 886 LNNLGATWSNLGDNRKAISYYEQSLQMMRSVYGEDTA--HPDIADSLNNLGGAWRNLGDH 943
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY ++L ++R + P D+A SL + + +G+ A+ ++++++
Sbjct: 944 RKAISYYEQALEMKRGIYGEDNAHP----DIADSLNNLGNARGDLGDNSKAISYYEQSLQ 999
Query: 353 RLESL----TLKPEEAG 365
S+ T P+ AG
Sbjct: 1000 MRRSIYGEDTAHPDIAG 1016
Score = 39.3 bits (90), Expect = 3.0, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG+ +GD A++Y+ S++ M+ + + H ++ SLN +G+ GD
Sbjct: 974 LNNLGNARGDLGDNSKAISYYEQSLQ--MRRSIYGEDTAHPDIAGSLNNLGNAWSNLGDH 1031
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY ++L ++ + P D+A SL + D ++G+ A+ +++A++
Sbjct: 1032 RKAISYYEQALEMKLSIYGEDTAHP----DIAASLNNMGDTWSNLGDNRKAISYYEQALE 1087
>gi|260787080|ref|XP_002588583.1| hypothetical protein BRAFLDRAFT_107532 [Branchiostoma floridae]
gi|229273748|gb|EEN44594.1| hypothetical protein BRAFLDRAFT_107532 [Branchiostoma floridae]
Length = 2284
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
GD C +GD A++Y +++ + +D H ++ +LN +G Y GD + A
Sbjct: 1963 FGDACGNLGDHRQAISYHEQALQMTQNIHGED--TAHPDITATLNSLGAAWSYLGDHRKA 2020
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
SYY +SL + R V + D+A SL + R +G+ AV ++++++
Sbjct: 2021 ISYYEQSLQMTRSIY----GVDTAHNDIAASLNNLGSTWRDLGDHRKAVSYYEQSLQMRR 2076
Query: 356 SL 357
S+
Sbjct: 2077 SM 2078
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ A L LG +GD A++Y+ S++ M + ++ H ++ SLN +G
Sbjct: 2000 ITATLNSLGAAWSYLGDHRKAISYYEQSLQ--MTRSIYGVDTAHNDIAASLNNLGSTWRD 2057
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL +RR + P D+A SL + + + AV ++
Sbjct: 2058 LGDHRKAVSYYEQSLQMRRSMYGEGTTHP----DIASSLNNLGAAWGDLDDHRKAVSYYE 2113
Query: 349 EAIKRLESL 357
+++K S+
Sbjct: 2114 QSLKMNRSI 2122
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG R +GD AV+YF S++ MK + H ++ SLN +G GD
Sbjct: 836 LNNLGIAWRDLGDHRKAVSYFEQSLQ--MKRSIYGEGTAHPAIATSLNNLGIAWSNLGDH 893
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SY+ ++L + R + P D+A +L + S+G+ A+ + +++
Sbjct: 894 RKAISYWEQALQMNRSVYGEDTQHP----DIAGTLNNLGAAWSSLGDHRKAISYHERSLQ 949
Query: 353 RLESL----TLKPEEA 364
S+ T+ PE A
Sbjct: 950 IYRSISGEGTVHPEIA 965
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ ++L LG R +GD AV+Y+ S++ M+ + H ++ SL+ +G +
Sbjct: 744 IASLLNNLGIAWRDLGDHRKAVSYYEQSLQ--MRRSIYGKGTAHPDIANSLSSLGTVWSC 801
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A YY ++L + R + P D+A SL + R +G+ AV F+
Sbjct: 802 LGDHRKAIRYYEQALEMMRSIYGEENAHP----DIATSLNNLGIAWRDLGDHRKAVSYFE 857
Query: 349 EAIKRLESL 357
++++ S+
Sbjct: 858 QSLQMKRSI 866
>gi|260825568|ref|XP_002607738.1| hypothetical protein BRAFLDRAFT_82815 [Branchiostoma floridae]
gi|229293087|gb|EEN63748.1| hypothetical protein BRAFLDRAFT_82815 [Branchiostoma floridae]
Length = 1510
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 147 IEGHARIKRSHTNSDKEEDEAGENKKVI---YEDVSMERGAFLVQQAMRAFRA--QNVES 201
I H I RS + GE +K I ++ ++ME+ + + A + A +N+ +
Sbjct: 1074 ITVHPNIARSLHGLGSCWSKLGEERKAIEYYHQSLTMEKSIYSDETAHPSIAASLRNLGA 1133
Query: 202 AKSRLSLCTEDIR--DQIERMG------NTSELCSQLGAVLGMLGDCCRAMGDADAAVAY 253
+ SRL + I+ +Q +M NT+ + A+L LG CCR +GD A+ Y
Sbjct: 1134 SYSRLGDQNKAIKCFEQSLKMTKIIYGDNTAH--PDVAALLTNLGLCCRQLGDQRKAI-Y 1190
Query: 254 FADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVK-R 312
+ + ++++ +D ++ +LN IG GD + A SYY +SL +R+ A
Sbjct: 1191 YHERALTMLRIIHEDHAAHPNIAGALNNIGMSWSELGDDKKAVSYYEQSLTMRKFAYGDM 1250
Query: 313 HSNVPSQVLDVAVSLAKVADVDRSI 337
H + + ++ S K+ D ++I
Sbjct: 1251 HPDTAESLNNLGASWKKLGDQKKAI 1275
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ +L G R +G A++Y S+ L + D+ + S SL +G +
Sbjct: 1342 IATLLYNTGSSWRILGHPKKAISYLEQSLMMLRTIYGDNTAHLDIAS-SLRNLGVCWWKC 1400
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
D + A SYY +SL +R+ ++ P D+A SL + +G+E A+ +++
Sbjct: 1401 NDQRKAVSYYEQSLEMRKTMYGHNTAHP----DIATSLNNLGLSYSKLGDETKAISFYEQ 1456
Query: 350 AIKRLESL 357
+++ L+++
Sbjct: 1457 SLRMLKTV 1464
>gi|291238522|ref|XP_002739177.1| PREDICTED: polycomb group ring finger 5-like [Saccoglossus
kowalevskii]
Length = 252
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC L + S C H +CK+CI R K+CP CG + E + D T+
Sbjct: 14 ITCSICGGYLIKPSTIAECLHTFCKSCIVRHFEESKNCPRCGIQVHETHPCEMLRMDKTM 73
Query: 140 QDVVDRFIEG 149
+D+V + + G
Sbjct: 74 EDIVFKLVPG 83
>gi|326923721|ref|XP_003208083.1| PREDICTED: polycomb group RING finger protein 5-like [Meleagris
gallopavo]
Length = 326
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 86 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 145
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 146 EEIIFKLVPG 155
>gi|260826311|ref|XP_002608109.1| hypothetical protein BRAFLDRAFT_91413 [Branchiostoma floridae]
gi|229293459|gb|EEN64119.1| hypothetical protein BRAFLDRAFT_91413 [Branchiostoma floridae]
Length = 1373
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 222 NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNK 281
NTS + A L LG R +G+ A+ Y+ ++E +M+ + + ++ LN
Sbjct: 873 NTSH--PDIAASLNNLGVAWRRLGNHKKAIRYYEQTLE-IMRNMYGEGTVHPDIANLLNN 929
Query: 282 IGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNED 341
+G+ Y GD + YY ++L +RR ++ P D+A SL + +IG++
Sbjct: 930 LGEAWIYLGDQRKTVKYYEQALQMRRSIYGENTAHP----DIAASLHNLGGTWSNIGDDR 985
Query: 342 VAVDGFQEAIKRLESL----TLKPEEA 364
AV ++++++ L S+ TL P+ A
Sbjct: 986 KAVTYYEQSLEMLRSVYGKDTLHPDIA 1012
Score = 38.9 bits (89), Expect = 4.0, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L L +G AV ++ ++ M+L + H +S SLN +G
Sbjct: 791 IAASLNNLSGSWTKLGKHRKAVNFYEQALR--MQLRIYGENTAHPDISCSLNNLGATWGN 848
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A +YY +SL ++R +++ P D+A SL + R +GN A+ ++
Sbjct: 849 LGDYRKALNYYEQSLQMKRSIYGENTSHP----DIAASLNNLGVAWRRLGNHKKAIRYYE 904
Query: 349 EAIKRLESL----TLKPEEAGL 366
+ ++ + ++ T+ P+ A L
Sbjct: 905 QTLEIMRNMYGEGTVHPDIANL 926
>gi|260814990|ref|XP_002602196.1| hypothetical protein BRAFLDRAFT_76883 [Branchiostoma floridae]
gi|229287503|gb|EEN58208.1| hypothetical protein BRAFLDRAFT_76883 [Branchiostoma floridae]
Length = 1765
Score = 47.4 bits (111), Expect = 0.014, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG R +GD AV+YF ++E M+ + H ++ SLN +G+
Sbjct: 1102 IAASLNNLGSAWRNLGDHRKAVSYFDQALE--MRRSIYGKNTAHPDIAQSLNNMGNAWGN 1159
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL ++R + P +A SL + +G+ A+ ++
Sbjct: 1160 LGDHRKAISYYEQSLQMKRSIYGEVTIHPG----IAASLYNLGATWSDLGDHRKAISYYE 1215
Query: 349 EAIKRLESL----TLKPEEAGLEQRRLSVLEFLNNQLSEKPPESTPKV 392
+A++ + S+ L L+QR + F+ N ++ ES P V
Sbjct: 1216 QALQMMRSIYVGQVLTMTSPDLQQRLQDLHTFIQNLMT---CESRPVV 1260
Score = 43.5 bits (101), Expect = 0.18, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG +GD A++Y+ ++E + + +D +H ++ SLN +G
Sbjct: 1058 FASSLNNLGGAWTNLGDHRKAISYYEQALEMMRGIYGED--TVHPNIAASLNNLGSAWRN 1115
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ ++L +RR +++ P D+A SL + + ++G+ A+ ++
Sbjct: 1116 LGDHRKAVSYFDQALEMRRSIYGKNTAHP----DIAQSLNNMGNAWGNLGDHRKAISYYE 1171
Query: 349 EAIKRLESL 357
++++ S+
Sbjct: 1172 QSLQMKRSI 1180
Score = 42.7 bits (99), Expect = 0.32, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG+ R +GD AV+Y+ ++E M+ + + H ++ SLN +G
Sbjct: 926 IAASLNNLGEAWRNLGDYRKAVSYYEQALE--MRRSIYGEDTAHPNIAASLNNLGATWSN 983
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L +RR + P ++A SL + ++G+ A+ ++
Sbjct: 984 LGDNRKAISYYEQALEMRRSIYGEDTAHP----NIADSLNNLGATWSNLGDNRKAISYYE 1039
Query: 349 EAIK 352
++++
Sbjct: 1040 QSLQ 1043
Score = 42.0 bits (97), Expect = 0.54, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD A++Y+ S++ MKL + + H + SLN +G GD
Sbjct: 1018 LNNLGATWSNLGDNRKAISYYEQSLQ--MKLSIYGEDTAHPDFASSLNNLGGAWTNLGDH 1075
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY ++L + R + P ++A SL + R++G+ AV F +A++
Sbjct: 1076 RKAISYYEQALEMMRGIYGEDTVHP----NIAASLNNLGSAWRNLGDHRKAVSYFDQALE 1131
Query: 353 RLESL 357
S+
Sbjct: 1132 MRRSI 1136
Score = 39.3 bits (90), Expect = 3.7, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 244 MGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSL 303
+GD A+ YF S++ + +D ++ SLN +G+ GD + A SYY ++L
Sbjct: 896 LGDHGKALYYFEQSLQMRRSIYGED-NTHPDIAASLNNLGEAWRNLGDYRKAVSYYEQAL 954
Query: 304 NVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+RR + P ++A SL + ++G+ A+ +++A++ S+
Sbjct: 955 EMRRSIYGEDTAHP----NIAASLNNLGATWSNLGDNRKAISYYEQALEMRRSI 1004
>gi|322791296|gb|EFZ15813.1| hypothetical protein SINV_04327 [Solenopsis invicta]
Length = 1427
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK+CI ++ K CP+C I K I D L
Sbjct: 19 LICKLCGGYFIDATTIIECLHSFCKSCIVKYLENNKYCPICDVQIHKSRPLLNIRPDRML 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|443709431|gb|ELU04103.1| hypothetical protein CAPTEDRAFT_149212 [Capitella teleta]
Length = 235
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 87 IGP-LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEA 135
I P ++C +C+ L E + T C H +CK CI ++ + CP CG I + I
Sbjct: 17 INPHITCSLCKGYLVEATTITECLHTFCKTCIVKYLEEHTSCPKCGELIHQSHPLNYISH 76
Query: 136 DTTLQDVVDRFI 147
D T+QD+V + +
Sbjct: 77 DRTMQDIVFKLV 88
>gi|260832480|ref|XP_002611185.1| hypothetical protein BRAFLDRAFT_88416 [Branchiostoma floridae]
gi|229296556|gb|EEN67195.1| hypothetical protein BRAFLDRAFT_88416 [Branchiostoma floridae]
Length = 1943
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG+ +GD AV+Y+ S++ M + + H ++ SLN +G+ GD
Sbjct: 704 LNKLGNAWNDLGDHRKAVSYYEQSLQ--MNWSIHGEDTAHPDIATSLNNLGNAWNDLGDH 761
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL + R + P D+A SL K+ + +G+ AV ++++++
Sbjct: 762 RKAVSYYEQSLQMNRSIHGEDTAHP----DIATSLNKLGNAWNDLGDHRKAVSYYEQSLQ 817
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG C +GD AV+YF S++ + D E H ++ SLN +G
Sbjct: 1816 IAKFLNNLGATCSDLGDHRKAVSYFEQSLQMNRSIYGKDTE--HPDIANSLNNLGAAWGT 1873
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL + R + + P D+A SL + ++G+ AV ++
Sbjct: 1874 LGDHKKAVSYYEQSLQMNRSIYGKDTEHP----DIANSLNNLGATWMNLGDHRKAVSYYE 1929
Query: 349 EAIKRLESL 357
++++ S+
Sbjct: 1930 QSLQMNRSI 1938
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIG----DLKYY 288
L LG R +GD AV+Y+ +++ + +D E H ++ SLN +G DL
Sbjct: 1600 LNNLGTAWRDLGDHRKAVSYYEQALQMNRSIYGEDTE--HPDIASSLNNLGATCSDL--- 1654
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL +R + + P D+A+SL + +G+ AV F+
Sbjct: 1655 -GDHKKAVSYFEQSLQMRWSIYGKDTEHP----DIAISLNNLGATCSDLGDHRKAVSYFE 1709
Query: 349 EAIKRLESLTLKPEEAGLEQRRLSVLEFLNN 379
++++ S+ K E + +FLNN
Sbjct: 1710 QSLEMNRSIYGKDTE------HPDIAKFLNN 1734
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG+ +GD AV+Y+ S++ M + + H ++ SLNK+G+ GD
Sbjct: 748 LNNLGNAWNDLGDHRKAVSYYEQSLQ--MNRSIHGEDTAHPDIATSLNKLGNAWNDLGDH 805
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL + + P D+A SL + + +G+ AV +++A++
Sbjct: 806 RKAVSYYEQSLQMNWSIHGEDTAHP----DIATSLNNLGNAWNDLGDHRKAVSYYEQALQ 861
Query: 353 RLESL 357
S+
Sbjct: 862 MNRSI 866
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 15/139 (10%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIG----D 284
+ + L LG C +GD AV+YF S++ + D E H +++SLN +G D
Sbjct: 1640 IASSLNNLGATCSDLGDHKKAVSYFEQSLQMRWSIYGKDTE--HPDIAISLNNLGATCSD 1697
Query: 285 LKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAV 344
L GD + A SY+ +SL + R + + P D+A L + +G+ AV
Sbjct: 1698 L----GDHRKAVSYFEQSLEMNRSIYGKDTEHP----DIAKFLNNLGATCSDLGDHRKAV 1749
Query: 345 DGFQEAIKRLESLTLKPEE 363
F+++++ S+ K E
Sbjct: 1750 SYFEQSLQMNRSIYGKDTE 1768
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIG----DLKYY 288
L LG C +GD AV+YF S+E + D E H ++ LN +G DL
Sbjct: 1776 LNNLGATCSDLGDHRKAVSYFEQSLEMNRSIYGKDTE--HPDIAKFLNNLGATCSDL--- 1830
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL + R + + P D+A SL + ++G+ AV ++
Sbjct: 1831 -GDHRKAVSYFEQSLQMNRSIYGKDTEHP----DIANSLNNLGAAWGTLGDHKKAVSYYE 1885
Query: 349 EAIKRLESLTLKPEE 363
++++ S+ K E
Sbjct: 1886 QSLQMNRSIYGKDTE 1900
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIG----D 284
+ L LG C +GD AV+YF S++ + D E H ++ SLN +G D
Sbjct: 1728 IAKFLNNLGATCSDLGDHRKAVSYFEQSLQMNRSIYGKDTE--HPDIANSLNNLGATCSD 1785
Query: 285 LKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAV 344
L GD + A SY+ +SL + R + + P D+A L + +G+ AV
Sbjct: 1786 L----GDHRKAVSYFEQSLEMNRSIYGKDTEHP----DIAKFLNNLGATCSDLGDHRKAV 1837
Query: 345 DGFQEAIKRLESLTLKPEE 363
F+++++ S+ K E
Sbjct: 1838 SYFEQSLQMNRSIYGKDTE 1856
>gi|260808877|ref|XP_002599233.1| hypothetical protein BRAFLDRAFT_64417 [Branchiostoma floridae]
gi|229284510|gb|EEN55245.1| hypothetical protein BRAFLDRAFT_64417 [Branchiostoma floridae]
Length = 3135
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LG C +GD A+ Y+ S+ LM D + ++++LN +G + G LQ
Sbjct: 2361 LHSLGSTCSDLGDEKQAIDYYDQSLS-LMNTVYGDNAVHPDIALTLNHLGLSWSHLGKLQ 2419
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
AR YY +SL++R + + L++A SL + + G++ A+ ++
Sbjct: 2420 RARDYYEQSLSMRETIYGK----GTAHLEIAESLDNLGSSWGAFGDQKKAISYYE----- 2470
Query: 354 LESLTLKPEEAGLEQRRLSVLEFLNN 379
SLT+K G V LNN
Sbjct: 2471 -RSLTMKKTVFGEHTAHPQVASTLNN 2495
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 224 SELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIG 283
SE ++ A L LG C +GD+ A+ YF +S+ L K D EI + LN +G
Sbjct: 2790 SEAHPEIIASLTKLGTTCLGVGDSKKAIRYFEESLR-LNKTLHGDSEIHPDIDELLNNLG 2848
Query: 284 DLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVA 343
GD Q A SY +SL +R+ + + P D+A SL+ + R +G A
Sbjct: 2849 LSWSELGDQQKAISYLKQSLTMRKTIYRDSESHP----DIAESLSNLGSSWRRLGKTKKA 2904
Query: 344 VDGFQEAI 351
+ + ++
Sbjct: 2905 TECLEASL 2912
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKY 287
Q+ + L LG +GD + ++Y++ ++E K+ + +H +++SL+ +G
Sbjct: 2488 QVASTLNNLGVAWTKLGDHNKGISYYSQALEMNKKIYGE--TTVHPDIALSLSNMGSSWC 2545
Query: 288 YGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
GD + A SY+ +SLN+R+ ++ P D+A+SL + ++G++ A+
Sbjct: 2546 ELGDHEKAFSYHEQSLNMRKTIFGDNTAHP----DIAMSLDNLGSCWLNLGDQKKAISYC 2601
Query: 348 QEAIKRLESL 357
+ +++ ++++
Sbjct: 2602 ERSLQMMKNV 2611
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 198 NVESAKSRLSLCTEDIRDQIERMGN-------TSELCS------QLGAVLGMLGDCCRAM 244
++ +A L +C ++ DQ + +G + +C ++ +L LG +
Sbjct: 1046 HIATALQNLGICWNELGDQKKAIGYFEQSERILTTICGGNTIHPEIAHLLNSLGSSWSHL 1105
Query: 245 GDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYG-GDLQAARSYYVRS 302
GD A Y+ S++ MK + + H ++ SLN +G L Y GD + A SY+ S
Sbjct: 1106 GDKKKAAVYYEKSLK--MKKAIYGDKTPHPGIASSLNNLG-LSYMDFGDHRKALSYFEES 1162
Query: 303 LNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
L +R+ +++ P + + L + ++G+E A+ ++++ L+S+
Sbjct: 1163 LAMRKTIYGKNAQQPH----ITLLLTNLGSCWSNLGDERKAISYHEQSLTMLKSI 1213
>gi|260827621|ref|XP_002608763.1| hypothetical protein BRAFLDRAFT_73982 [Branchiostoma floridae]
gi|229294115|gb|EEN64773.1| hypothetical protein BRAFLDRAFT_73982 [Branchiostoma floridae]
Length = 2376
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 205 RLSLCTE-DIRDQIERMG-NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLM 262
+ C E + I + G NT+ S++ L LG+ R +GD A+ YF SV
Sbjct: 512 KFKTCAEYTLHKYISKYGENTAH--SEISQSLTNLGNALRDLGDHRKAIGYFEQSVHMWR 569
Query: 263 KLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVL 321
+ D H ++ S+N +G GD + A SYY +SL++RR + + P
Sbjct: 570 AIFGKD--TAHPDIASSVNNLGTAWRDLGDYRKAISYYEQSLHMRRTIYGKDTAHP---- 623
Query: 322 DVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
D+ SL + IG+ A+ ++++++
Sbjct: 624 DITTSLNNLGAACSDIGDHRKAISYYEQSLQ 654
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 32/247 (12%)
Query: 129 DIEKIE--ADTTLQDVVDRFIE--GHARIKRSHTNSDKEEDEAGENKKVI---YEDVSME 181
D EK + A+ TL + ++ E H+ I +S TN + G+++K I + V M
Sbjct: 509 DYEKFKTCAEYTLHKYISKYGENTAHSEISQSLTNLGNALRDLGDHRKAIGYFEQSVHMW 568
Query: 182 RGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGM----- 236
R F A ++ S+ + L D+ D + + + + G
Sbjct: 569 RAIFGKDTA-----HPDIASSVNNLGTAWRDLGDYRKAISYYEQSLHMRRTIYGKDTAHP 623
Query: 237 --------LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKY 287
LG C +GD A++Y+ S++ + D H +++SLN +G
Sbjct: 624 DITTSLNNLGAACSDIGDHRKAISYYEQSLQMTRVIYGGD--TAHPDIAMSLNNLGRTWS 681
Query: 288 YGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
GD + A SYY +SL + R S P D+ SL + IG+ A+ +
Sbjct: 682 DLGDHRKAISYYEQSLQMMRSIYGEGSAHP----DITTSLNNLGAACSDIGDHRKAISYY 737
Query: 348 QEAIKRL 354
+++++ +
Sbjct: 738 EQSLQMI 744
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LG+ C +GD A++Y+ S++ + + + ++ SLN +G+ GD +
Sbjct: 849 LKNLGNACSDLGDYRKAISYYEQSLQ-MTRFTYGENTAHPDIAASLNNLGNAWSKLGDHR 907
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A S++ +S+ +RR + P D+A+SL +A+ ++G+ A+ +++ ++
Sbjct: 908 KAISHHEQSIQMRRIIYGEDTAHP----DIAMSLNTLANTWSNLGDRRKAISYYEQELQM 963
Query: 354 LESL 357
S+
Sbjct: 964 RRSI 967
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG C +GD A++Y+ S++ + + H +++SLN +G+ Y GD
Sbjct: 717 LNNLGAACSDIGDHRKAISYYEQSLQMISEYLW--WGTAHPDIAMSLNNLGNAWSYIGDY 774
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +S + + S P D+A SL+ + ++G+ A+ ++++++
Sbjct: 775 RKAISYYEQSEQMIQYIYGEDSAHP----DIAASLSNLGATMSNLGDHRKAIGYYEQSLQ 830
Query: 353 RLESL 357
S+
Sbjct: 831 MKRSI 835
>gi|307208978|gb|EFN86178.1| Polycomb group protein Psc [Harpegnathos saltator]
Length = 1598
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 78 FGYDAQSFKIGP-LSCMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLCGADIEK 132
G A ++ P L C +C+ L + + C H +C++CI S+ CP C + K
Sbjct: 4 VGKRALLHEVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLSKSAHCPSCKHALNK 63
Query: 133 ----IEADTTLQDVVDRFIEG 149
I+AD LQD+V + + G
Sbjct: 64 AKPNIKADKALQDIVYKLVPG 84
>gi|260797391|ref|XP_002593686.1| hypothetical protein BRAFLDRAFT_107667 [Branchiostoma floridae]
gi|229278914|gb|EEN49697.1| hypothetical protein BRAFLDRAFT_107667 [Branchiostoma floridae]
Length = 1689
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L +G C +GD A+ Y+ S++ + K + T++ SLN IG GD +
Sbjct: 1347 LNNIGTCWNTLGDQRKAIRYYEQSLK-MCKAIYGETTAHPTIASSLNNIGTCWSDLGDQR 1405
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A Y+ +SLN+R+ + P D+A SL + +G++ A+ ++E++K
Sbjct: 1406 KAICYHEQSLNMRKTIYGETTAHP----DIASSLNNIGTCWSDLGDQRKAIKYYEESLKI 1461
Query: 354 LESL 357
++++
Sbjct: 1462 MKTM 1465
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L +G+C +GD AV Y+ S+ + E H +++SLN IG
Sbjct: 1256 IAASLNNIGNCWNTLGDHRKAVRYYELSLNMGKTIYG---ETAHPDIALSLNNIGTCWNE 1312
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD A YY +SLN+ + + PS +A+SL + ++G++ A+ ++
Sbjct: 1313 LGDQGKAIRYYEQSLNMWKTIYGETTAHPS----IALSLNNIGTCWNTLGDQRKAIRYYE 1368
Query: 349 EAIK 352
+++K
Sbjct: 1369 QSLK 1372
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 148 EGHARIKRSHTNSDKEEDEAGENKK-VIYEDVS--MERGAFLVQQAMRAFRAQNVESAKS 204
+ H I S N K G+ KK V+Y + S ME+ + A ++ S+ +
Sbjct: 1119 KAHPDIAASLNNIAKSWSHLGDQKKAVMYFEYSLKMEKAIYGETTAH-----PDIASSFN 1173
Query: 205 RLSLCTEDIRDQIERM--------------GNTSELCSQLGAVLGMLGDCCRAMGDADAA 250
+ C D+ DQ + + G T+E + + L +G C +GD A
Sbjct: 1174 NIGTCWSDLGDQNKAIMYCEQSLNMRKTIYGETAE-HPDIASSLNNIGACWGKLGDQKKA 1232
Query: 251 VAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAV 310
++Y+ S++ + K + ++ SLN IG+ GD + A YY SLN+ + +
Sbjct: 1233 ISYYEQSLK-ISKAIYGETTAHPDIAASLNNIGNCWNTLGDHRKAVRYYELSLNMGK-TI 1290
Query: 311 KRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+ P D+A+SL + +G++ A+ +++++ +++
Sbjct: 1291 YGETAHP----DIALSLNNIGTCWNELGDQGKAIRYYEQSLNMWKTI 1333
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ ++L +G+C + D A+ Y S++ MK + H ++ SLN IG Y
Sbjct: 1475 IASLLYNIGNCLSCLDDQIKAIGYHEQSLK--MKKSIYGETTAHLDIASSLNNIGTCWYK 1532
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
G+ + A YY +SL + + + P D+A SL + S+ ++ AV ++
Sbjct: 1533 MGNPKQAMGYYEQSLKITKAIYGETTAHP----DIASSLNNIGICWNSLDDQKKAVRFYE 1588
Query: 349 EAIKRLESL 357
+++K ++++
Sbjct: 1589 QSLKMMKAI 1597
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L G C +GD A+ Y+ S++ + + E H ++ +L+ IG
Sbjct: 1036 ISATLNSTGSCWNGLGDPKKAIRYYEQSLKMDEAIYGETAEHPH-IATTLSNIGLCYSNV 1094
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A S++ SL + + P D+A SL +A +G++ AV F+
Sbjct: 1095 GDQKRAMSFHEESLKMMKAIYGETKAHP----DIAASLNNIAKSWSHLGDQKKAVMYFEY 1150
Query: 350 AIK 352
++K
Sbjct: 1151 SLK 1153
>gi|417397603|gb|JAA45835.1| Putative polycomb group ring finger protein 5 [Desmodus rotundus]
Length = 236
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|260823358|ref|XP_002604150.1| hypothetical protein BRAFLDRAFT_71558 [Branchiostoma floridae]
gi|229289475|gb|EEN60161.1| hypothetical protein BRAFLDRAFT_71558 [Branchiostoma floridae]
Length = 550
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ +L LG+ R +GD A+ Y+ S++ + ++ D ++ SLN +G +
Sbjct: 131 IATLLNNLGNAWRDLGDYRKAINYYEQSLQ-MKRIIYGDNTAHPNIADSLNNLGTAWSHL 189
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A+SYY +SL + + + P D+A L + + R +G+ A++ +++
Sbjct: 190 GDHRKAKSYYEQSLQMTQIIYGEDTEHP----DIATLLNNLGNAWRDLGDYRKAINYYEQ 245
Query: 350 AIKRLESL 357
+++ +S+
Sbjct: 246 SLQMRQSI 253
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +L LG+ R +GD A+ Y+ S++ M+ + + H ++ S N +G +
Sbjct: 219 IATLLNNLGNAWRDLGDYRKAINYYEQSLQ--MRQSIYGKDTAHPNIAASHNNLGTTWSH 276
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL +RR + P D+A L + + R +G+ ++ ++
Sbjct: 277 LGDHRKAISYFEQSLKMRRIIYGEDTEHP----DIATLLNNLGNAWRDLGDYRKTINYYE 332
Query: 349 EAIKRLESL 357
++++ +S+
Sbjct: 333 QSLQMRQSI 341
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ ++L LG +GD A++Y+ S++ + + +D H ++ SLN +G+
Sbjct: 439 IASLLNNLGVAWSILGDHRKAISYYEQSLKMMRIIYGED--TTHPDIAKSLNNLGNAWSN 496
Query: 289 GGDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVAD 332
GD A SYY +SL +RR + H + + ++ ++ ++D
Sbjct: 497 LGDHSKAISYYEQSLQMRRSVFGKDTAHPGIADSLKNLGIAWRNLSD 543
>gi|148709823|gb|EDL41769.1| polycomb group ring finger 5, isoform CRA_b [Mus musculus]
Length = 238
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 18 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 77
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 78 EEIIFKLVPG 87
>gi|260817655|ref|XP_002603701.1| hypothetical protein BRAFLDRAFT_126892 [Branchiostoma floridae]
gi|229289023|gb|EEN59712.1| hypothetical protein BRAFLDRAFT_126892 [Branchiostoma floridae]
Length = 628
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 87 IGP-LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEA 135
I P + C++C + + T C H +CK+CI ++ K CP+C I + +
Sbjct: 418 INPHIVCILCAGYFIDATTVTECLHTFCKSCIVKYLQTSKFCPMCNIKIHETQPLLNLRP 477
Query: 136 DTTLQDVVDRFIEG 149
D T+QD+V + + G
Sbjct: 478 DRTMQDIVYKVVPG 491
>gi|260814986|ref|XP_002602194.1| hypothetical protein BRAFLDRAFT_76881 [Branchiostoma floridae]
gi|229287501|gb|EEN58206.1| hypothetical protein BRAFLDRAFT_76881 [Branchiostoma floridae]
Length = 1768
Score = 47.0 bits (110), Expect = 0.016, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LG+ R +GD A++Y+ S++ + + DD ++ SLN +G GD +
Sbjct: 778 LNNLGEAWRNLGDHRKAISYYEQSLQMMRSVYGDD-NAHPDIAGSLNNLGGAWSNLGDNR 836
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A SYY +SL ++R + P +A SL + + R +G+ A+ ++++++
Sbjct: 837 KAISYYEKSLQMKRSIYGEDTAHPH----IAASLNNLGEAWRVLGDYRKAISYYEQSLQM 892
Query: 354 LESL----TLKPEEAG 365
S+ T P+ AG
Sbjct: 893 KRSIYGEDTTHPDIAG 908
Score = 43.9 bits (102), Expect = 0.13, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ L LG +GD A++Y+ S++ + +D H ++ SLN +G+
Sbjct: 818 IAGSLNNLGGAWSNLGDNRKAISYYEKSLQMKRSIYGEDTAHPH-IAASLNNLGEAWRVL 876
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY +SL ++R + P D+A SL + +++G+ A+ F++
Sbjct: 877 GDYRKAISYYEQSLQMKRSIYGEDTTHP----DIAGSLNNMGTAWKNLGDYRKALCYFEQ 932
Query: 350 AIKRLESL 357
++ S+
Sbjct: 933 TLQMRRSI 940
Score = 43.1 bits (100), Expect = 0.21, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 228 SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLK 286
S + A L LG +GD +V+YF +++ M+ + +I H ++ SLN +G+
Sbjct: 1080 SDIAASLTNLGAAWNNLGDHRKSVSYFDQALQ--MRRSIYGEDIAHPGIADSLNNMGNAW 1137
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
GD + A SYY ++L +RR + P ++A SL + ++G+ AV
Sbjct: 1138 GNLGDYRKAISYYEQALQMRRSIYGEDTAHP----NIAASLNNLGSTWSNLGDNRKAVSF 1193
Query: 347 FQEAIKRLESL 357
++++++ S+
Sbjct: 1194 YEQSLQMKRSI 1204
Score = 40.0 bits (92), Expect = 1.9, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYYGGDL 292
L LG +GD AV+Y+ S++ ++ +D I H +++ LN +G+ GD
Sbjct: 954 LTNLGAAWFNLGDYTKAVSYYKQSLQITQRIYGED--IAHPGIAILLNNMGNACSNLGDY 1011
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
A SYY +SL +RR + P ++A SL + ++G+ AV ++++++
Sbjct: 1012 GKAISYYEQSLQMRRSIYGEDTAHP----NIADSLNNLGATWSNLGDNRKAVSFYEQSLQ 1067
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +L +G+ C +GD A++Y+ S++ M+ + + H ++ SLN +G
Sbjct: 994 IAILLNNMGNACSNLGDYGKAISYYEQSLQ--MRRSIYGEDTAHPNIADSLNNLGATWSN 1051
Query: 289 GGDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
GD + A S+Y +SL ++ HS D+A SL + ++G+ +V
Sbjct: 1052 LGDNRKAVSFYEQSLQMKLSIYGEDTAHS-------DIAASLTNLGAAWNNLGDHRKSVS 1104
Query: 346 GFQEAIKRLESL 357
F +A++ S+
Sbjct: 1105 YFDQALQMRRSI 1116
>gi|193788616|ref|NP_001123354.1| polycomb group RING finger protein 5 [Rattus norvegicus]
gi|187469199|gb|AAI67067.1| Pcgf5 protein [Rattus norvegicus]
Length = 236
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|12832332|dbj|BAB22061.1| unnamed protein product [Mus musculus]
Length = 233
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|21313116|ref|NP_083784.1| polycomb group RING finger protein 5 [Mus musculus]
gi|12857499|dbj|BAB31023.1| unnamed protein product [Mus musculus]
gi|187954253|gb|AAI39259.1| Polycomb group ring finger 5 [Mus musculus]
gi|223461108|gb|AAI39260.1| Polycomb group ring finger 5 [Mus musculus]
Length = 236
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|354473588|ref|XP_003499016.1| PREDICTED: polycomb group RING finger protein 5-like [Cricetulus
griseus]
Length = 329
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|189441945|gb|AAI67306.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CPLC I + ++ D +
Sbjct: 33 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPLCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|326432942|gb|EGD78512.1| hypothetical protein PTSG_09210 [Salpingoeca sp. ATCC 50818]
Length = 569
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIE------ADTTL 139
L C +C L + + + C H +CK+CI F CP+CG +I D T+
Sbjct: 335 LMCRLCDGYLIDATTLSECLHTFCKSCIVNFFESNNSCPVCGTLAHEINPHDTLRQDRTM 394
Query: 140 QDVVDRFIEG 149
Q +V + + G
Sbjct: 395 QTIVYKLVPG 404
>gi|330930180|ref|XP_003302926.1| hypothetical protein PTT_14923 [Pyrenophora teres f. teres 0-1]
gi|311321393|gb|EFQ88962.1| hypothetical protein PTT_14923 [Pyrenophora teres f. teres 0-1]
Length = 467
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGA--DIEKIEADTTLQDVV 143
L C IC+ + T C H +C CI R CP C +K+ + +++VV
Sbjct: 28 LRCEICKEF-YNNPVITSCHHTFCSICIRRCIATDGKCPSCMTVCSSDKLAPNIAIREVV 86
Query: 144 DRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSME 181
RF E + +DKEE +AG KK ED ME
Sbjct: 87 TRFQEARPKAM-ELARADKEETDAGSKKKRKLEDTDME 123
>gi|118347796|ref|XP_001007374.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89289141|gb|EAR87129.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1007
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 30/158 (18%)
Query: 214 RDQIERMGNTSELCSQLGA--------VLGMLGDCCRAMGDADAAVAYFADSVEFLMKLP 265
++ +ER +E+ +LG ++ +G+ +GD A Y +DS++ ++
Sbjct: 675 KNNLER---ANEMLVKLGKKKLPFFSLIIQNIGNLYNFLGDYQKAEKYLSDSLDLRKQIF 731
Query: 266 MDDLEIIHTLSVSLNKIGDLKYYG-GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVA 324
+D + I T ++N IGD Y G GD Q A +Y++SL +R+ + N +A
Sbjct: 732 KEDHQDIAT---NMNYIGD-SYLGLGDYQKALEFYLKSLRIRQKLFNENHN------SIA 781
Query: 325 VSLAKVADVDRSIGNEDVAVDGFQEAIKRL-ESLTLKP 361
SL S+GN + + +++A K L +SL ++
Sbjct: 782 TSL-------NSVGNCYLKLKNYKQAQKNLFQSLNMRQ 812
>gi|260814958|ref|XP_002602180.1| hypothetical protein BRAFLDRAFT_76868 [Branchiostoma floridae]
gi|229287487|gb|EEN58192.1| hypothetical protein BRAFLDRAFT_76868 [Branchiostoma floridae]
Length = 1714
Score = 46.6 bits (109), Expect = 0.019, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 165 DEAGENKKVIYEDVSMERGAF-LVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNT 223
++A E K IYE++ R A +Q+++ R+ E DI + MGN
Sbjct: 1199 EQALEMKLSIYENLGDHRKAISYYEQSLQMMRSIYGEDNAH------PDIAGSLHNMGNA 1252
Query: 224 SELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIG 283
G+ +GD AV+YF +++ + + +D ++ SLN +G
Sbjct: 1253 -------------WGN----LGDHRKAVSYFDQALQMMRSIYGED-NAHPDIADSLNNMG 1294
Query: 284 DLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVA 343
++ GD + A SYY ++L + R + P D+A SL +A+V ++G+ A
Sbjct: 1295 NVWRNLGDQRKAISYYEQALEMMRGIYGEGNAHP----DIAASLNNLANVWGNLGDHRKA 1350
Query: 344 VDGFQEAIKRLESL----TLKPEEAG 365
V F++A++ S+ T P+ AG
Sbjct: 1351 VSYFEQALEMTRSIYGKGTAHPDIAG 1376
Score = 43.5 bits (101), Expect = 0.20, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDL---EIIHTLSVSLNKIGDLK 286
+ +L +G+ CR +GD A++Y+ S++ + +D +I +L N +L
Sbjct: 884 IAILLTNMGNACRNLGDYGKAISYYEQSLQMRRSIYGEDTAHPDIADSLHNMGNAWRNLG 943
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
Y+G A SYY +SL + R ++ P D++ SL + +V ++G+ A+
Sbjct: 944 YHG----KAISYYEQSLQMMRSIYGENTAHP----DISGSLNNMGNVWGNLGDHRKAISY 995
Query: 347 FQEAIKRLESL 357
+++A++ S+
Sbjct: 996 YEQALEMTRSI 1006
Score = 42.7 bits (99), Expect = 0.29, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
+G+ +GD A++Y+ S++ + + D H ++ SLN +G++ GD + A
Sbjct: 1049 MGNAWGNLGDHRKAISYYEQSLQMMRSIYGKDTA--HPDIAESLNNMGNVWGNLGDHRKA 1106
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
SYY ++L +RR + P ++A SL + + R++G A+ ++++++ +
Sbjct: 1107 ISYYEQALEMRRSIYGEDTAHP----EIAASLNNLGEAWRNLGYHRKAISYYEQSLQMMR 1162
Query: 356 SL 357
S+
Sbjct: 1163 SV 1164
Score = 42.0 bits (97), Expect = 0.54, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 206 LSLCTED-IRDQIERMG-NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
L C+E + + + + G NT+ + A L L +GD + AV Y+ S++ M+
Sbjct: 772 LKKCSEQTLHNYLSKYGENTAH--RDVAASLDDLAFALMTLGDHEKAVRYYEQSLQ--MR 827
Query: 264 LPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLD 322
M E H + SLN +G+ + GD A SYY +SL + R P +
Sbjct: 828 WSMYGEETAHPVIFESLNNMGNAWFNLGDHTKAVSYYKQSLQMTRSTYGEDIAHP----N 883
Query: 323 VAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+A+ L + + R++G+ A+ ++++++ S+
Sbjct: 884 IAILLTNMGNACRNLGDYGKAISYYEQSLQMRRSI 918
Score = 42.0 bits (97), Expect = 0.56, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L +G+ R +GD A++Y+ ++E +M+ + ++ SLN + ++ GD +
Sbjct: 1290 LNNMGNVWRNLGDQRKAISYYEQALE-MMRGIYGEGNAHPDIAASLNNLANVWGNLGDHR 1348
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
A SY+ ++L + R + + P D+A SL + D R++G+ AV+ +++++
Sbjct: 1349 KAVSYFEQALEMTRSIYGKGTAHP----DIAGSLNNMGDTWRNLGDHRKAVNYHEQSLQ 1403
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 242 RAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVR 301
R +GD A++Y+ S++ + + +D ++ SL+ +G+ GD + A SYY +
Sbjct: 1010 RNLGDYRKAISYYEQSLQMMRSIYGED-NAHPDIAGSLHNMGNAWGNLGDHRKAISYYEQ 1068
Query: 302 SLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL---- 357
SL + R + + P D+A SL + +V ++G+ A+ +++A++ S+
Sbjct: 1069 SLQMMRSIYGKDTAHP----DIAESLNNMGNVWGNLGDHRKAISYYEQALEMRRSIYGED 1124
Query: 358 TLKPEEAG 365
T PE A
Sbjct: 1125 TAHPEIAA 1132
Score = 38.5 bits (88), Expect = 5.4, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ L +GD R +GD AV Y S++ MK + + H+ ++ SLN +G
Sbjct: 1374 IAGSLNNMGDTWRNLGDHRKAVNYHEQSLQ--MKWSIYGKDTAHSDIAASLNNLGITWSN 1431
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ ++L++ RD + P D+ SL + + + + A+ ++
Sbjct: 1432 LGDHRKAISYHEQALDMMRDIYGEDNAHP----DIVKSLNNLGNAWCDLEDHRKAISYYE 1487
Query: 349 EAIKRLESL 357
+A++ + S+
Sbjct: 1488 QALEIMRSI 1496
>gi|260792748|ref|XP_002591376.1| hypothetical protein BRAFLDRAFT_93999 [Branchiostoma floridae]
gi|229276581|gb|EEN47387.1| hypothetical protein BRAFLDRAFT_93999 [Branchiostoma floridae]
Length = 1226
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ L LG C+ +GD A+ Y+ ++E + K + H + SLN +G
Sbjct: 1030 IATSLNNLGSACKNLGDYRRAINYYEQALE-MNKTIYGQSTVHHDTATSLNNLGATWDNL 1088
Query: 290 GDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
GD + A S+Y ++L + RD + H+++ + ++++ + K+ D ++I + A+
Sbjct: 1089 GDYRRAISFYGQALEMFRDIYGQSTAHADIATLLINLGSACGKMGDYRKAIRYHEKALQM 1148
Query: 347 F 347
F
Sbjct: 1149 F 1149
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG C +GD A+ YF +++ L + H ++ SLN +G Y+
Sbjct: 854 IAIALNNLGTACDNLGDYRKAINYFEQALQMLRSIYGQHKS--HPDIANSLNNLGSAWYF 911
Query: 289 GGDLQAARSYYVRSLNVRRDAV---KRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAV 344
GD + A SYY + L +RR+ HS++ + + ++ + K D ++I + A+
Sbjct: 912 LGDHRKAISYYKQVLQMRRNIYGFDTAHSDIATSLNNLGGAYEKQGDYRKAINYHEQAL 970
>gi|414871833|tpg|DAA50390.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 526
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGADI-----EKIEADTT 138
++C +C+ LL + + + C H +C+ CI +F D CP+C D+ EK+ AD +
Sbjct: 111 MTCPLCRRLLRDATTISECLHTFCRKCIYQKFDDEEVECCPVCKIDLGCTPTEKLRADHS 170
Query: 139 LQDVVDRFIEGHARIKRSHTNSDK 162
LQDV + KR N+++
Sbjct: 171 LQDVRSKLFP----FKRKKINAEE 190
>gi|260809325|ref|XP_002599456.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
gi|229284735|gb|EEN55468.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
Length = 280
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
L C+IC + + C H +CK CI ++ D CP+C + K I AD TL
Sbjct: 16 LMCVICGGYFIDATTIIECLHSFCKTCIVKYLDTSKYCPVCDVQVHKTRPLLNIRADKTL 75
Query: 140 QDVVDRFI 147
Q +V + +
Sbjct: 76 QSLVYKLV 83
>gi|116198109|ref|XP_001224866.1| hypothetical protein CHGG_07210 [Chaetomium globosum CBS 148.51]
gi|88178489|gb|EAQ85957.1| hypothetical protein CHGG_07210 [Chaetomium globosum CBS 148.51]
Length = 1480
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDRFI 147
C+ICQ+ FE T C H++CK CI+ + ++CP+C + + L D+ +
Sbjct: 1135 CIICQSN-FEVGVLTVCGHLFCKECITFWLRAHRNCPMCKKKLHQY----NLYDITLKPQ 1189
Query: 148 EGHARIKRSHTNSDKEEDE-AGENKKV--IYEDVSMERGAFL 186
E +R + D +DE +KKV IY D S ++ A +
Sbjct: 1190 ELRVHSERQQASGDSGKDEQTAPSKKVSAIYSDFSADQLAVI 1231
>gi|260816950|ref|XP_002603350.1| hypothetical protein BRAFLDRAFT_80343 [Branchiostoma floridae]
gi|229288669|gb|EEN59361.1| hypothetical protein BRAFLDRAFT_80343 [Branchiostoma floridae]
Length = 1189
Score = 46.6 bits (109), Expect = 0.019, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 149 GHARIKRSHTNSDKEEDEAGENKKVI-YEDVSMERGAFLVQQAMRAFRAQNVESAKSRLS 207
H I S N + G++KK + Y + S+ Q MR +N +A ++
Sbjct: 853 AHPDIASSLNNVGSAWSDLGDHKKAVSYSEQSL--------QMMRTIHGEN--TAHPHIA 902
Query: 208 LCTEDIRDQIERMGNTSELCSQLGAVLGM-LGDCCRAMGDADAAVAYFADSVEFLMKLPM 266
+ ++ + +G+ + S LG L D +GD AV+Y S++ + +
Sbjct: 903 IALNNLGNAWRHLGDHKKAVSYHEQQLGQRLVD----LGDHKKAVSYHEQSLQMMRTIYG 958
Query: 267 DDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVS 326
++ H S SLN +G+ GD + A SYY ++L +RR +++ P +A++
Sbjct: 959 ENTAHPHIAS-SLNNLGNAWMDLGDHKKAVSYYEQALQMRRTIHGKNTAHPH----IAIA 1013
Query: 327 LAKVADVDRSIGNEDVAVDGFQEAI 351
L + + R +G+ AV ++++
Sbjct: 1014 LNNLGNAWRDLGDHKKAVSYHEQSL 1038
Score = 43.1 bits (100), Expect = 0.23, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 216 QIERMGNTSELC-SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT 274
Q+ER+ + + + L +G C +GD AV+Y S++ + + ++ H
Sbjct: 710 QMERIIHGENIAHPNIALSLNNVGSACSDLGDHKKAVSYSEQSLQMMRTIYGENTAHPH- 768
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
++++LN +G+ + GD + A SY +SL++ R ++ P D+A SL + +
Sbjct: 769 IAIALNNLGNAWRHLGDHKKAVSYLEQSLHMERIIYGENTAHP----DIASSLGNLGNAW 824
Query: 335 RSIGNEDVAVDGFQEAIK 352
++G+ AV +++++
Sbjct: 825 WNLGDHKKAVSYHEQSLQ 842
Score = 40.0 bits (92), Expect = 1.7, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKY 287
+ + L LG+ +GD AV+Y+ +++ M+ + H ++++LN +G+
Sbjct: 965 HIASSLNNLGNAWMDLGDHKKAVSYYEQALQ--MRRTIHGKNTAHPHIAIALNNLGNAWR 1022
Query: 288 YGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
GD + A SY+ +SLN+R ++ P D+A SL + + + +G+ AV
Sbjct: 1023 DLGDHKKAVSYHEQSLNMRLIIYGENTAHP----DIASSLYNLGNAWKDLGDHKKAVSYH 1078
Query: 348 QEAI 351
++++
Sbjct: 1079 EQSL 1082
Score = 39.3 bits (90), Expect = 3.8, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYY 288
+ L LG+ R +GD AV+Y S+ + ++ + ++ SL +G+ +
Sbjct: 768 HIAIALNNLGNAWRHLGDHKKAVSYLEQSLH-MERIIYGENTAHPDIASSLGNLGNAWWN 826
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL +RR + P D+A SL V +G+ AV +
Sbjct: 827 LGDHKKAVSYHEQSLQMRRIIYGENIAHP----DIASSLNNVGSAWSDLGDHKKAVSYSE 882
Query: 349 EAIKRLESL 357
++++ + ++
Sbjct: 883 QSLQMMRTI 891
>gi|350529343|ref|NP_001016417.2| polycomb group RING finger protein 1 [Xenopus (Silurana)
tropicalis]
gi|123893179|sp|Q28H21.1|PCGF1_XENTR RecName: Full=Polycomb group RING finger protein 1
gi|89273860|emb|CAJ81866.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 259
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CPLC I + ++ D +
Sbjct: 43 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPLCNIKIHETQPLLNLKLDRVM 102
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 103 QDIVYKLVPG 112
>gi|355709615|gb|AES03651.1| polycomb group ring finger 5 [Mustela putorius furo]
Length = 108
Score = 46.6 bits (109), Expect = 0.020, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|423736485|ref|ZP_17709638.1| hypothetical protein VCHC41B1_3664, partial [Vibrio cholerae
HC-41B1]
gi|408627411|gb|EKL00222.1| hypothetical protein VCHC41B1_3664, partial [Vibrio cholerae
HC-41B1]
Length = 119
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLS 276
+G++ ++ L LGD + +GD AA A +A S+ +L D ++ LS
Sbjct: 9 LGDSPQVLRDLSVSFSKLGDIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLS 68
Query: 277 VSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
VS +K+G+++ GDL AA++ + +SL + + + P + D++VS
Sbjct: 69 VSFSKLGEIEQQLGDLHAAKAAHAQSLAICQQLHTSLGDSPQVLRDLSVSF 119
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 47/77 (61%)
Query: 267 DDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVS 326
D +++ LSVS +K+GD++ GDL AA++ Y +SL + + + P + D++VS
Sbjct: 11 DSPQVLRDLSVSFSKLGDIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLSVS 70
Query: 327 LAKVADVDRSIGNEDVA 343
+K+ ++++ +G+ A
Sbjct: 71 FSKLGEIEQQLGDLHAA 87
>gi|149730354|ref|XP_001493775.1| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 258
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSSDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|350529342|ref|NP_001089498.2| polycomb group RING finger protein 1 [Xenopus laevis]
gi|223590126|sp|Q4QR06.2|PCGF1_XENLA RecName: Full=Polycomb group RING finger protein 1
Length = 259
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CPLC I + ++ D +
Sbjct: 43 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPLCNIKIHETQPLLNLKLDRVM 102
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 103 QDIVYKLVPG 112
>gi|50749508|ref|XP_421668.1| PREDICTED: polycomb group RING finger protein 5 [Gallus gallus]
Length = 256
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|50305263|ref|XP_452591.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690357|sp|Q6CTZ8.1|RAD18_KLULA RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
RAD18
gi|49641724|emb|CAH01442.1| KLLA0C08756p [Kluyveromyces lactis]
Length = 427
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK--IEADTTLQDVV 143
L C IC+ L + S TPC H +C CI ++ CPLC +D+ + ++ + +Q++
Sbjct: 30 LRCHICKDFL-KASVLTPCGHSFCSICIRKYLQKESKCPLCLSDLTESMLQKEFLVQEIC 88
Query: 144 DRFIEGHARIKRSHTNSDKEEDEAGE 169
+++ +++ T S +EE++ E
Sbjct: 89 SSYVKLRGSLQKHLTISSQEEEKDNE 114
>gi|113675578|ref|NP_001038700.1| polycomb group RING finger protein 5-B [Danio rerio]
gi|123887311|sp|Q1JPS1.1|PCF5B_DANRE RecName: Full=Polycomb group RING finger protein 5-B
gi|94574392|gb|AAI16620.1| Zgc:136815 [Danio rerio]
Length = 232
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C +C+ L + + T C H +CK+CI + DCP CG + E + D TL
Sbjct: 16 ITCFVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++V+ + + G
Sbjct: 76 EEVIFKLVPG 85
>gi|125545675|gb|EAY91814.1| hypothetical protein OsI_13455 [Oryza sativa Indica Group]
Length = 439
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD------CPLCGADI-----EKIEADTT 138
++C +C+ LL E + T C H +CK CI D CP+C D+ EK+ D
Sbjct: 20 MTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKLRPDHN 79
Query: 139 LQDVVDRFI 147
+QD+ ++
Sbjct: 80 VQDIRNKVF 88
>gi|260832484|ref|XP_002611187.1| hypothetical protein BRAFLDRAFT_88414 [Branchiostoma floridae]
gi|229296558|gb|EEN67197.1| hypothetical protein BRAFLDRAFT_88414 [Branchiostoma floridae]
Length = 1957
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG +GD AV+Y+ ++E M+ + H ++ SLN +G + Y
Sbjct: 1131 IASSLNNLGATRSDLGDHRKAVSYYEQALE--MRWSIYGKNTSHPDIAKSLNNLGAVWYN 1188
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GDL+ A SYY +SL ++R + + P D+A SL + + +G+ A+ +
Sbjct: 1189 LGDLKKAVSYYEQSLQMKRSIYGKDTEHP----DIASSLNNLGNAWGKLGDYRKAL-SYH 1243
Query: 349 EAIKRLESLTLKPEEAGLEQRRLSVLEFLNN 379
E +SL +K G + + LNN
Sbjct: 1244 E-----QSLQMKRSINGEDTAHFDIARSLNN 1269
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD AV+Y+ +++ MK + + H ++ SLN +G GDL
Sbjct: 1003 LNSLGATWGDLGDLKKAVSYYEQALQ--MKRSIYGKDTAHPDIASSLNNLGAAWTNLGDL 1060
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY ++L + R + P D+A SL + + +G+ AV +++A++
Sbjct: 1061 KKAVSYYEQALQMNRSIYGEDTEHP----DIAGSLHNLGNTWGDLGDHKKAVSYYEQALQ 1116
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDL---EIIHTLSVSLNKIGDLK 286
+ + L LG+ C +GD AV+Y+ +++ + D +I +L N GDL
Sbjct: 911 IASSLNNLGNACGKLGDYRKAVSYYDQALQMNRSIYGKDAAHPDIASSLHNLGNTWGDL- 969
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
GDL+ A SYY ++L ++R + ++ D+A SL + +G+ AV
Sbjct: 970 ---GDLKKAVSYYEQALQMKRSIYGEN----TEHTDIARSLNSLGATWGDLGDLKKAVSY 1022
Query: 347 FQEAIKRLESL 357
+++A++ S+
Sbjct: 1023 YEQALQMKRSI 1033
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG R +GD A +Y+ +++ + +D E H ++ SLN +G GDL
Sbjct: 827 LNNLGTAWRDLGDHRKATSYYEQALQMERSIYGEDTE--HPNIASSLNNLGVTWGDLGDL 884
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY ++L + R + P D+A SL + + +G+ AV + +A++
Sbjct: 885 KKAVSYYKQALQMERSIYGEDTAHP----DIASSLNNLGNACGKLGDYRKAVSYYDQALQ 940
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLE---IIHTLSVSLNKIGDLK 286
+ + L LG +GD AV+Y+ +++ + +D E I +L N GDL
Sbjct: 1043 IASSLNNLGAAWTNLGDLKKAVSYYEQALQMNRSIYGEDTEHPDIAGSLHNLGNTWGDL- 1101
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
GD + A SYY ++L + R + P D+A SL + +G+ AV
Sbjct: 1102 ---GDHKKAVSYYEQALQMNRSIYGEDTEHP----DIASSLNNLGATRSDLGDHRKAVSY 1154
Query: 347 FQEAIKRLESL 357
+++A++ S+
Sbjct: 1155 YEQALEMRWSI 1165
>gi|387018154|gb|AFJ51195.1| Polycomb group RING finger protein 5-like [Crotalus adamanteus]
Length = 256
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 22/104 (21%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK+CI + DCP CG + E + D TL
Sbjct: 16 ITCCICKGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEGHARIKRSHTNSD-----------KEEDEAGENKK 172
++++ + + G R K H ++ KEE+ EN K
Sbjct: 76 EEIIFKLVPG-LREKELHREAEFWKKNKPIENGKEENANSENPK 118
>gi|260814966|ref|XP_002602184.1| hypothetical protein BRAFLDRAFT_76872 [Branchiostoma floridae]
gi|229287491|gb|EEN58196.1| hypothetical protein BRAFLDRAFT_76872 [Branchiostoma floridae]
Length = 1901
Score = 46.6 bits (109), Expect = 0.023, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 233 VLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDL 292
+L LG+ R +GD A++Y+ ++E ++ D+ ++ SLN +G++ GD
Sbjct: 1186 ILTNLGNTWRNLGDHRKALSYYKQALEIYVE---DNAH--PNIAGSLNNLGNVWRNLGDN 1240
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL +RR + P D+A SL + +IG+ AV + +A++
Sbjct: 1241 RKALSYYEQSLKIRRSIYGEDNAHP----DIAASLNNLGGAWGNIGDHRKAVSYYDQALE 1296
Query: 353 RLESL 357
+ +
Sbjct: 1297 MMRGI 1301
Score = 45.8 bits (107), Expect = 0.039, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG +GD A++Y+ S++ MK + + H ++ SLN +G
Sbjct: 882 IAASLNNLGGAWTNLGDHRKAISYYEQSLQ--MKRSIYGEDTAHPNIADSLNNLGGAWTN 939
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L +RRD + P ++A SL + D ++G+ A+ ++
Sbjct: 940 LGDHRKAISYYEQALEMRRDIYGEDNAHP----NIAGSLNNLGDAWANLGDHRKAISYYE 995
Query: 349 EAIKRLESL 357
+A++ + S+
Sbjct: 996 QALEMMWSI 1004
>gi|40539033|gb|AAR87290.1| expressed protein [Oryza sativa Japonica Group]
gi|108711005|gb|ABF98800.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|125587873|gb|EAZ28537.1| hypothetical protein OsJ_12518 [Oryza sativa Japonica Group]
Length = 439
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD------CPLCGADI-----EKIEADTT 138
++C +C+ LL E + T C H +CK CI D CP+C D+ EK+ D
Sbjct: 20 MTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKLRPDHN 79
Query: 139 LQDVVDRFI 147
+QD+ ++
Sbjct: 80 VQDIRNKVF 88
>gi|194335176|ref|YP_002019742.1| hypothetical protein Paes_2400 [Prosthecochloris aestuarii DSM 271]
gi|194312994|gb|ACF47388.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
Length = 649
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 212 DIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLP-MDDLE 270
+IR ++ R N + + L L + R + D ++A+ + +++E +L +
Sbjct: 289 EIRRELART-NRATYLPDVATTLNNLANLQRGINDYESALKGYQEALEIYRELARTNRAT 347
Query: 271 IIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKV 330
+ ++++LN + L+ D ++A Y +L +RR+ + +N + + DVA +L +
Sbjct: 348 YLPDVAMTLNNMAVLQSDRNDYESALKGYQEALEIRRELAR--TNRATYLPDVATTLNNL 405
Query: 331 ADVDRSIGNEDVAVDGFQEAIK 352
A++ R I + + A+ G+QEA++
Sbjct: 406 ANLQRGINDYESALKGYQEALE 427
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 212 DIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLP-MDDLE 270
+IR ++ R N + + L L + R + D ++A+ + +++E +L +
Sbjct: 381 EIRRELART-NRATYLPDVATTLNNLANLQRGINDYESALKGYQEALEIRRELARTNQAT 439
Query: 271 IIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKV 330
+ ++ +LN + L+ D ++A Y +L +RR+ + +N + + DVA +L +
Sbjct: 440 YLPYVATTLNNLAVLQRGINDYESALKGYQEALEIRRELAR--TNRATYLPDVATTLNNL 497
Query: 331 ADVDRSIGNEDVAVDGFQEAIK 352
A + R I + + A+ G+QEA++
Sbjct: 498 AVLQRGINDYESALKGYQEALE 519
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 233 VLGMLGDCCRAMGDADAAVAYFADSVEFLMKLP-MDDLEIIHTLSVSLNKIGDLKYYGGD 291
L L + D ++A+ + +++E +L + + ++ +LN + L+ D
Sbjct: 217 TLNNLANLQSDRNDYESALKGYQEALEIYRELARTNQATYLPYVATTLNNLAVLQRGIND 276
Query: 292 LQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
++A Y +L +RR+ + +N + + DVA +L +A++ R I + + A+ G+QEA+
Sbjct: 277 YESALKGYQEALEIRRELAR--TNRATYLPDVATTLNNLANLQRGINDYESALKGYQEAL 334
Query: 352 K 352
+
Sbjct: 335 E 335
>gi|67678255|gb|AAH97736.1| MGC115420 protein [Xenopus laevis]
Length = 249
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CPLC I + ++ D +
Sbjct: 33 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPLCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|213624162|gb|AAI70727.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
gi|213625506|gb|AAI70753.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CPLC I + ++ D +
Sbjct: 33 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPLCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|326507272|dbj|BAJ95713.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 521
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
++C +C LL + + + C H +C+ CI +F D CP+C D +EK+ AD +
Sbjct: 115 MTCPLCNRLLRDATTVSECLHTFCRKCIYKKFNDEEVESCPVCNIDLGCTPVEKLRADHS 174
Query: 139 LQDVVDRFI 147
L DV +
Sbjct: 175 LHDVRSKIF 183
>gi|424010751|ref|ZP_17753675.1| TPR repeat-containing domain protein, partial [Vibrio cholerae
HC-44C1]
gi|408862316|gb|EKM01840.1| TPR repeat-containing domain protein, partial [Vibrio cholerae
HC-44C1]
Length = 77
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 46/73 (63%)
Query: 267 DDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVS 326
D +++ LSVS +K+GD++ GDL AA++ Y +SL + + + P + D++VS
Sbjct: 5 DSPQVLRDLSVSFSKLGDIEQQLGDLHAAKAAYAQSLAICQQLHTSLGDSPPVLRDLSVS 64
Query: 327 LAKVADVDRSIGN 339
+K+ ++++ +G+
Sbjct: 65 FSKLGEIEQQLGD 77
>gi|291404424|ref|XP_002718426.1| PREDICTED: polycomb group ring finger 5 [Oryctolagus cuniculus]
Length = 278
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|281338533|gb|EFB14117.1| hypothetical protein PANDA_005532 [Ailuropoda melanoleuca]
Length = 224
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|194337840|ref|YP_002019634.1| SEFIR domain-containing protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310317|gb|ACF45017.1| SEFIR domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 830
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 231 GAVL-GMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
GA+L +LGD R +G+ D A ++ +++E L K D L L+ +L +GDL+
Sbjct: 599 GALLENLLGDLERRLGNVDLARGHYDNAIE-LYKKEQDQL----GLANALKALGDLESRL 653
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
G++ AR +Y ++ + + + L +A +L + D++R +GN D+A +
Sbjct: 654 GNVDLARGHYDNAIELYKKEQAK--------LGLANALKALGDLERRLGNVDLARGHYDN 705
Query: 350 AIK 352
AI+
Sbjct: 706 AIE 708
>gi|403259945|ref|XP_003922452.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403259947|ref|XP_003922453.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 253
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|296220747|ref|XP_002756439.1| PREDICTED: polycomb group RING finger protein 5 isoform 2
[Callithrix jacchus]
Length = 253
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|426252775|ref|XP_004020078.1| PREDICTED: polycomb group RING finger protein 5 [Ovis aries]
Length = 256
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|73997984|ref|XP_543923.2| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Canis
lupus familiaris]
Length = 256
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGIQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|344274969|ref|XP_003409287.1| PREDICTED: polycomb group RING finger protein 5-like [Loxodonta
africana]
Length = 256
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|311271618|ref|XP_003133191.1| PREDICTED: polycomb group RING finger protein 5-like [Sus scrofa]
Length = 256
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|351710204|gb|EHB13123.1| Polycomb group RING finger protein 5 [Heterocephalus glaber]
Length = 255
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|348553186|ref|XP_003462408.1| PREDICTED: polycomb group RING finger protein 5-like [Cavia
porcellus]
Length = 255
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|118151048|ref|NP_001071448.1| polycomb group RING finger protein 5 [Bos taurus]
gi|126253669|sp|A0JN86.1|PCGF5_BOVIN RecName: Full=Polycomb group RING finger protein 5
gi|117306237|gb|AAI26566.1| Polycomb group ring finger 5 [Bos taurus]
gi|296472843|tpg|DAA14958.1| TPA: polycomb group RING finger protein 5 [Bos taurus]
Length = 255
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|417397932|gb|JAA45999.1| Putative polycomb group ring finger protein 5 [Desmodus rotundus]
Length = 256
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|328867027|gb|EGG15410.1| hypothetical protein DFA_10245 [Dictyostelium fasciculatum]
Length = 663
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 77 PFGYDAQSFKIGPLSCMICQALLFE----CSKCTPCSHVYCKACISRFKDCPLCGADIEK 132
PF YD +S + C IC L + S + C H++C+AC+ + CP C +EK
Sbjct: 5 PFTYDDESKVDESIECPICYCPLIDPVEHSSYQSQCVHMFCRACVGKLDKCPFCRMAVEK 64
Query: 133 IEADTTLQDVVDRFIEG 149
EA L RFI G
Sbjct: 65 WEA-VALTPSTQRFIFG 80
>gi|224066301|ref|XP_002302072.1| predicted protein [Populus trichocarpa]
gi|222843798|gb|EEE81345.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGAD-----IEKIEADTT 138
++C++C LL + + + C H +C+ CI R CP+C + +EK+ D
Sbjct: 24 MTCLLCNKLLRDATTISECLHTFCRKCIYRRISNEGLDSCPICNINLGCVPLEKLRPDHN 83
Query: 139 LQDVVDRFIEGHAR 152
LQDV + R
Sbjct: 84 LQDVRSKIFPYKKR 97
>gi|149757062|ref|XP_001496466.1| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 256
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|440897766|gb|ELR49390.1| Polycomb group RING finger protein 5 [Bos grunniens mutus]
Length = 256
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|335773371|gb|AEH58370.1| polycomb group RING finger protein 5-like protein [Equus caballus]
Length = 256
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|126272969|ref|XP_001367374.1| PREDICTED: polycomb group RING finger protein 5-like [Monodelphis
domestica]
Length = 255
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|260826353|ref|XP_002608130.1| hypothetical protein BRAFLDRAFT_91391 [Branchiostoma floridae]
gi|229293480|gb|EEN64140.1| hypothetical protein BRAFLDRAFT_91391 [Branchiostoma floridae]
Length = 1429
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L LG +GD A++Y+ S+E + K D +++SLN G +
Sbjct: 1302 IAASLNNLGSAWSDIGDHRMAISYYKQSLE-MRKSIYGDATTHPDIAMSLNNFGKVWSDL 1360
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY +SL +RR ++ P D+ SL + R +G+ A++ Q+
Sbjct: 1361 GDHRKAVSYYEQSLQMRRSIYVENTAHP----DIVQSLNNLCAAWRELGDYGKAMNYLQQ 1416
Query: 350 AIKRLESLT 358
+ +E +T
Sbjct: 1417 MKQVIEVIT 1425
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ L LG C ++GD AV Y+ S+ LMK + H ++ SLN +G +
Sbjct: 1149 MAGTLDNLGGACSSLGDLKKAVNYYKQSL--LMKWRIYGENTAHADIADSLNSLGTVWDE 1206
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVA-DVDRSIGNEDVA 343
G+L+ A SYY SL + R+ + H A+S K + + RSI ED A
Sbjct: 1207 LGNLEKAISYYTHSLKINRNDLLYHRK--------AISYYKESLRMRRSIYGEDTA 1254
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 206 LSLCTED-IRDQIERMG-NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
L C+E + + + G NT+ S + A L L A+GD +V Y+ S++
Sbjct: 993 LKTCSEQTLHYYLSKYGENTAH--SDVAASLDNLAFALGALGDHKNSVRYYEQSLQMRQS 1050
Query: 264 LPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLD 322
+ +D H ++ SLN +G + GD + SYY +SL + R + L+
Sbjct: 1051 IYSED--TAHPDIASSLNNLGRVWTDQGDYRKTVSYYEQSLQMMRSIYGE----DTAHLN 1104
Query: 323 VAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+A+SL + V R +G+ AV F+++++ S+
Sbjct: 1105 IAISLNNLGGVWRQLGDNRKAVKYFEQSLQMKRSI 1139
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG+ +GD AV+YF S++ MK + H ++ SLN +GD
Sbjct: 54 IAASLNNLGNAWSNLGDHRKAVSYFEQSLQ--MKGRIFSENTAHPDIAASLNNLGDAWRD 111
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL +++ + P D+A SL + D ++G+ A G+
Sbjct: 112 LGDHRKAISYYEQSLQMQQCIYGEDTAHP----DIATSLNNLGDAWGNLGDHRKAA-GYN 166
Query: 349 E 349
E
Sbjct: 167 E 167
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LGD +GD A Y S++ M+ + + H ++ SLN G GD
Sbjct: 146 LNNLGDAWGNLGDHRKAAGYNEQSLQ--MRRGIYGEDTAHPDIAASLNNFGRALEGVGDH 203
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL + R + ++ P D+ SL + V ++G+ A++ + E
Sbjct: 204 KKAVSYYEQSLQMNRSIYGKGTSHP----DITASLNNLGIVWSNLGDHRKAIN-YHE--- 255
Query: 353 RLESLTLKPEEAGLEQRRLSVLEFLNN 379
+SL +K + G +++ LNN
Sbjct: 256 --QSLQMKRDIYGENTAHPEIVKSLNN 280
>gi|307189309|gb|EFN73740.1| Polycomb group protein Psc [Camponotus floridanus]
Length = 1377
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLCGADIEK----IEADTTLQD 141
L C++C+ L + + C H +C++CI S CP C + K I+AD LQ+
Sbjct: 17 LVCLLCRGYLIDATTIVECLHSFCRSCILKALSTSAQCPSCKHALNKAKPNIKADKALQE 76
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 77 IVYKLVPG 84
>gi|301763803|ref|XP_002917339.1| PREDICTED: polycomb group RING finger protein 5-like [Ailuropoda
melanoleuca]
gi|410975675|ref|XP_003994256.1| PREDICTED: polycomb group RING finger protein 5 [Felis catus]
Length = 256
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|260788276|ref|XP_002589176.1| hypothetical protein BRAFLDRAFT_84930 [Branchiostoma floridae]
gi|229274351|gb|EEN45187.1| hypothetical protein BRAFLDRAFT_84930 [Branchiostoma floridae]
Length = 1185
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 206 LSLCTEDIR-DQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKL 264
+S C + ++ QI NT+ + ++L LG+ +GD A+ Y+ S++ MK
Sbjct: 950 ISYCEQSLKMKQIIYGDNTAH--PDIASLLNNLGNAWSDLGDHRKAINYYEQSLK--MKQ 1005
Query: 265 PMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDV 323
+ H ++ LN +G + GD + A SYY +SL +RR + + P D+
Sbjct: 1006 IIYGENTAHPAIANLLNSLGAAWGFLGDYRTAISYYEQSLQIRRVIYGKDTAHP----DI 1061
Query: 324 AVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
A SL + R +G+ A+ ++++K
Sbjct: 1062 ASSLNNLGTAWRKLGDHRKAISYCEQSLK 1090
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 238 GDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAAR 296
G +GD AV Y S++ + + ++ H ++ LN +G + GD + A
Sbjct: 849 GYTWIKLGDQRKAVGYIQQSLQMIRHIYGEN--TAHPAIANLLNSLGAAWGFLGDYRTAI 906
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
SYY +SL +RR + + P D+A SL + R +G+ A+ ++++K
Sbjct: 907 SYYEQSLQIRRVIYGKDTAHP----DIASSLNNLGTAWRKLGDHRKAISYCEQSLK 958
>gi|402880924|ref|XP_003904036.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Papio
anubis]
gi|402880926|ref|XP_003904037.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Papio
anubis]
gi|355782955|gb|EHH64876.1| hypothetical protein EGM_18205 [Macaca fascicularis]
gi|380784417|gb|AFE64084.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784419|gb|AFE64085.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784421|gb|AFE64086.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784423|gb|AFE64087.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|383413563|gb|AFH29995.1| polycomb group RING finger protein 5 [Macaca mulatta]
Length = 256
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|432904422|ref|XP_004077323.1| PREDICTED: polycomb group RING finger protein 5-A-like [Oryzias
latipes]
Length = 247
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C +C+ L + + T C H +CK+CI + DCP CG + E + D TL
Sbjct: 17 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEESNDCPKCGIQVHETNPLEMLRLDNTL 76
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 77 EEIIFKLVPG 86
>gi|260785520|ref|XP_002587809.1| hypothetical protein BRAFLDRAFT_92258 [Branchiostoma floridae]
gi|229272962|gb|EEN43820.1| hypothetical protein BRAFLDRAFT_92258 [Branchiostoma floridae]
Length = 1441
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 209 CTED-IRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMD 267
C E + D +++ G + L LGD R +GD+ AV+Y+ S++ M+L +
Sbjct: 813 CLEQALHDVVQKNGKNEDFVESLNN----LGDAWRNIGDSKKAVSYYEQSLQ--MQLTIY 866
Query: 268 DLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVS 326
+H ++ +LN +G+ + GD + A +Y +SL ++ N P+ +A S
Sbjct: 867 GESAVHPNIASTLNNLGNARKDIGDYRGAIGHYEQSLQMKLTMYDDTVN-PA----IAAS 921
Query: 327 LAKVADVDRSIGNEDVAVDGFQEAIK 352
L + +G+ +V F+E+++
Sbjct: 922 LYNLGATWNDLGHHRKSVSYFEESLQ 947
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 197 QNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFAD 256
+N+ +K +S + ++ Q+ G S + + + L LG+ + +GD A+ ++
Sbjct: 843 RNIGDSKKAVSYYEQSLQMQLTIYGE-SAVHPNIASTLNNLGNARKDIGDYRGAIGHYEQ 901
Query: 257 SVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNV 316
S++ MKL M D + ++ SL +G G + + SY+ SL +RR ++
Sbjct: 902 SLQ--MKLTMYDDTVNPAIAASLYNLGATWNDLGHHRKSVSYFEESLQMRRRIYGDNTTH 959
Query: 317 PSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
P D+A SL + + R +G+ + A+ +++++ +++
Sbjct: 960 P----DIADSLYNLGNAWRELGDFEKALSYSEQSLQMQQTI 996
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG +G +V+YF +S++ ++ D+ H ++ SL +G+
Sbjct: 918 IAASLYNLGATWNDLGHHRKSVSYFEESLQMRRRIYGDN--TTHPDIADSLYNLGNAWRE 975
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY +SL +++ + P+ ++ SL +A+ +GN A++ ++
Sbjct: 976 LGDFEKALSYSEQSLQMQQTIYGESTAHPA----ISASLDNLANTWIELGNPKKAINFYE 1031
Query: 349 EAIKRLESL----TLKPEEA 364
+A+K S+ T+ P+ A
Sbjct: 1032 QALKMRRSIFGEDTVHPDIA 1051
>gi|426232409|ref|XP_004010216.1| PREDICTED: uncharacterized protein LOC101107965 [Ovis aries]
Length = 286
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ CP C I + I D T+
Sbjct: 15 ITCRLCGGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEGHARIK 154
QD+V + + G +K
Sbjct: 75 QDIVYKLVPGLQEVK 89
>gi|47223598|emb|CAF99207.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1023
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISR-FK----DCPLCGADIEK---IEADTTLQDVV 143
C+ CQ L F+ T CSH CK C+ R F+ CP C D+ K + +TTLQ ++
Sbjct: 954 CVCCQELAFQ-PITTICSHNVCKTCLQRSFRAKVYTCPACRHDLGKDYVMTQNTTLQKLL 1012
Query: 144 DRFIEGHAR 152
D+F G+++
Sbjct: 1013 DQFFPGYSK 1021
>gi|33300663|ref|NP_115749.2| polycomb group RING finger protein 5 [Homo sapiens]
gi|375065846|ref|NP_001243478.1| polycomb group RING finger protein 5 [Homo sapiens]
gi|380036033|ref|NP_001244030.1| polycomb group RING finger protein 5 [Homo sapiens]
gi|297686995|ref|XP_002821014.1| PREDICTED: polycomb group RING finger protein 5 [Pongo abelii]
gi|332212309|ref|XP_003255263.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Nomascus
leucogenys]
gi|426365544|ref|XP_004049831.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Gorilla
gorilla gorilla]
gi|426365546|ref|XP_004049832.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Gorilla
gorilla gorilla]
gi|441600613|ref|XP_004087624.1| PREDICTED: polycomb group RING finger protein 5 [Nomascus
leucogenys]
gi|74750353|sp|Q86SE9.1|PCGF5_HUMAN RecName: Full=Polycomb group RING finger protein 5; AltName:
Full=RING finger protein 159
gi|30353997|gb|AAH51845.1| PCGF5 protein [Homo sapiens]
gi|30722356|emb|CAD91165.1| hypothetical protein [Homo sapiens]
gi|117646070|emb|CAL38502.1| hypothetical protein [synthetic construct]
gi|119570497|gb|EAW50112.1| polycomb group ring finger 5, isoform CRA_a [Homo sapiens]
gi|119570498|gb|EAW50113.1| polycomb group ring finger 5, isoform CRA_a [Homo sapiens]
gi|221044402|dbj|BAH13878.1| unnamed protein product [Homo sapiens]
gi|261859692|dbj|BAI46368.1| polycomb group ring finger 5 [synthetic construct]
Length = 256
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|397510020|ref|XP_003825403.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Pan
paniscus]
gi|397510022|ref|XP_003825404.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Pan
paniscus]
gi|410226392|gb|JAA10415.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258158|gb|JAA17046.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258160|gb|JAA17047.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258162|gb|JAA17048.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258164|gb|JAA17049.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258166|gb|JAA17050.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258168|gb|JAA17051.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410304080|gb|JAA30640.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410338739|gb|JAA38316.1| polycomb group ring finger 5 [Pan troglodytes]
Length = 256
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|443728544|gb|ELU14844.1| hypothetical protein CAPTEDRAFT_178639, partial [Capitella teleta]
Length = 277
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C L + + C H +C++CI ++ + CP+C I K + D TL
Sbjct: 16 LMCVLCGGYLIDATISVECLHAFCRSCIMKYTEGCRTCPICDTLIHKTRPQLNLRPDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDLVYKLVPG 85
>gi|114631765|ref|XP_001144756.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Pan
troglodytes]
gi|332834619|ref|XP_003312724.1| PREDICTED: polycomb group RING finger protein 5 [Pan troglodytes]
Length = 256
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|449282985|gb|EMC89699.1| Polycomb group RING finger protein 5 [Columba livia]
Length = 256
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|224052561|ref|XP_002188526.1| PREDICTED: polycomb group RING finger protein 5 [Taeniopygia
guttata]
Length = 256
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|340723907|ref|XP_003400328.1| PREDICTED: hypothetical protein LOC100651499 [Bombus terrestris]
Length = 1412
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLCGADIEK----IEADTTLQD 141
L C +C L + + C H +C++CI +R CP C + K I+AD LQD
Sbjct: 17 LICPLCIGYLIDATTVVECLHSFCRSCILKHLNREAHCPSCKHVLNKAKPNIKADKALQD 76
Query: 142 VVDRFIEG--HARIKR 155
+V + + G H ++R
Sbjct: 77 IVYKLVPGLYHKEMRR 92
>gi|414872711|tpg|DAA51268.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 458
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGADI-----EKIEADTT 138
++C +C+ LL E + T C H +C+ CI + D CP+C D+ EK+ D
Sbjct: 19 MTCPLCRGLLREATAITVCLHTFCRECILEKINDEEIDCCPVCNIDLGCDPEEKLRPDHN 78
Query: 139 LQDVVDRFI 147
LQD+ ++
Sbjct: 79 LQDIRNKVF 87
>gi|443694272|gb|ELT95456.1| hypothetical protein CAPTEDRAFT_202625 [Capitella teleta]
Length = 752
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDR 145
L C IC LL + + CSH +C CIS + K+CP+C A I L +DR
Sbjct: 491 LQCSICNELLIQATSLN-CSHSFCSMCISEWMAVKKECPVCRAAITSHLKAIVLDSYIDR 549
Query: 146 FIE 148
+E
Sbjct: 550 MVE 552
>gi|342186298|emb|CCC95784.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 567
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEADTTLQDVVD 144
L+C +C+ L + PC HV+C +C+SR+ K C C I +I + + V+
Sbjct: 212 LTCSVCKFLYYRPCSVLPCMHVFCSSCVSRWVADGKKTCIECRGKILEIRPSHKINNCVE 271
Query: 145 RFIEGHARIKRS 156
+ ++ + +++RS
Sbjct: 272 QLLQRNPKLRRS 283
>gi|302822410|ref|XP_002992863.1| hypothetical protein SELMODRAFT_448935 [Selaginella moellendorffii]
gi|300139311|gb|EFJ06054.1| hypothetical protein SELMODRAFT_448935 [Selaginella moellendorffii]
Length = 554
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS-RFKD-----CPLCGAD-----IEKIEADTT 138
L+C +C L E + + C H +CK CI RF D CP+C D +EK+ AD
Sbjct: 24 LTCPLCGNLFREATTISECLHTFCKDCIHDRFSDEETNSCPMCNVDLGTVPLEKLRADPQ 83
Query: 139 LQDV 142
L DV
Sbjct: 84 LDDV 87
>gi|432951654|ref|XP_004084869.1| PREDICTED: polycomb group RING finger protein 1-like [Oryzias
latipes]
Length = 260
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 43 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 102
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 103 QDIVYKLVPG 112
>gi|125537292|gb|EAY83780.1| hypothetical protein OsI_38996 [Oryza sativa Indica Group]
gi|125579972|gb|EAZ21118.1| hypothetical protein OsJ_36761 [Oryza sativa Japonica Group]
Length = 470
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGAD-----IEKIEADTT 138
++C +C+ +L + + + C H +C+ CI + + CP+C D +EK+ AD
Sbjct: 72 MTCPLCRRILRDATTVSECLHTFCRKCIYKKINDEELEHCPVCKIDLGCAPLEKLRADHN 131
Query: 139 LQDVVDRFIEGHARIKRSHTNSDKEE 164
+QDV + +KR N+++ E
Sbjct: 132 IQDVRSKIFP----LKRKKVNAEEVE 153
>gi|395820790|ref|XP_003783743.1| PREDICTED: polycomb group RING finger protein 5 [Otolemur
garnettii]
Length = 256
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|260832984|ref|XP_002611437.1| hypothetical protein BRAFLDRAFT_63931 [Branchiostoma floridae]
gi|229296808|gb|EEN67447.1| hypothetical protein BRAFLDRAFT_63931 [Branchiostoma floridae]
Length = 1400
Score = 45.8 bits (107), Expect = 0.036, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LG+ R +GD AV Y+ +++ + H ++ SLN +G+ GD
Sbjct: 1103 LNSLGNAQRNLGDHRKAVNYYEQALKMTRSI-YGKSTAHHDIAHSLNNLGNAWKGLGDHV 1161
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A SYY +SL +RR + P D+A SL + +GN A+ +++++K
Sbjct: 1162 KAASYYEQSLQMRRRIYGEGTVHP----DIAASLNNLGSAWSDLGNHRKAIGYYEQSLKM 1217
Query: 354 LESL 357
+ S+
Sbjct: 1218 MRSI 1221
Score = 45.8 bits (107), Expect = 0.038, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L LG +G+ A+ Y+ S++ +M+ + H ++ SLN +G Y
Sbjct: 1187 IAASLNNLGSAWSDLGNHRKAIGYYEQSLK-MMRSIYGEGNAHHDIANSLNNLGTAWMYI 1245
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY +SL +RR + + P V+ SL+ + +GN A F++
Sbjct: 1246 GDHRKAVSYYEQSLQMRRSILGEGTVYPG----VSTSLSNLGIAWSILGNHRKAASYFEQ 1301
Query: 350 AIK 352
+++
Sbjct: 1302 SLQ 1304
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG R +GD AV Y S++ M+ + + H ++ SLN +G Y
Sbjct: 1011 IASSLNSLGAAWRIIGDHRKAVRYHEQSLK--MRRIIYGEDTAHPNIANSLNNVGKAWYG 1068
Query: 289 GGDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
GD + A ++ ++L + R HS D+ SL + + R++G+ AV+
Sbjct: 1069 LGDYRKAIEHHEQALQMSRSMYGEDAAHS-------DIVDSLNSLGNAQRNLGDHRKAVN 1121
Query: 346 GFQEAIKRLESL 357
+++A+K S+
Sbjct: 1122 YYEQALKMTRSI 1133
Score = 37.7 bits (86), Expect = 9.7, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 218 ERMGN--TSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTL 275
E +GN T S + A L LG +GD A++Y+ S++ +M+ + +
Sbjct: 821 ETLGNNLTENKPSNIAASLDDLGKAWAKLGDDKKAISYYEQSLQ-MMRSIYGEKTAHPDI 879
Query: 276 SVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAV---KRHSNVPSQVLDVAVSLAKVAD 332
+ SL+ +G G+ + A SY RSL +RR HS D+A SL + +
Sbjct: 880 ANSLDNLGAAWSALGNHRKAVSYNERSLQMRRSIYGDDTAHS-------DIACSLNNLGN 932
Query: 333 VDRSIGNEDVAVDGFQEAIK 352
++G+ AV ++++++
Sbjct: 933 AWSNLGDHKKAVVNYEQSLQ 952
>gi|71656989|ref|XP_817033.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882200|gb|EAN95182.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 535
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEADTTLQDVVD 144
L+C +C+ L PC HV C ACIS++ K C C A+I ++ +Q V+
Sbjct: 191 LTCPVCRGLFIRPCSTIPCLHVCCAACISQWIDVGHKSCVQCRANIWEVRPAHKIQSCVE 250
Query: 145 RFIEGHARIKRSHTNSDKEEDEAGENKKV 173
++ + ++ R SD E E +N +
Sbjct: 251 ELLKSNPQLAR----SDAELHEFAKNDTI 275
>gi|123794666|sp|Q3UK78.1|PCGF5_MOUSE RecName: Full=Polycomb group RING finger protein 5; AltName:
Full=RING finger protein 159
gi|74222234|dbj|BAE26924.1| unnamed protein product [Mus musculus]
gi|219519442|gb|AAI45591.1| Pcgf5 protein [Mus musculus]
Length = 256
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|444722999|gb|ELW63671.1| Polycomb group RING finger protein 2 [Tupaia chinensis]
Length = 102
Score = 45.8 bits (107), Expect = 0.038, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C + + C H +CK CI+R+ K CP+C + K I +D TL
Sbjct: 16 LMCALCGGNFIDATTTVECLHSFCKTCIARYLETNKYCPMCDVQVHKTRPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
+++V + + G
Sbjct: 76 RNIVYKLVPG 85
>gi|410914467|ref|XP_003970709.1| PREDICTED: polycomb group RING finger protein 1-like [Takifugu
rubripes]
Length = 261
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 43 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 102
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 103 QDIVYKLVPG 112
>gi|219518728|gb|AAI45592.1| Pcgf5 protein [Mus musculus]
Length = 255
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|410926339|ref|XP_003976636.1| PREDICTED: polycomb group RING finger protein 5-A-like [Takifugu
rubripes]
Length = 244
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C +C+ L + + T C H +CK+CI + DCP CG + E + D TL
Sbjct: 17 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQVHETNPLEMLRLDNTL 76
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 77 EEIIFKLVPG 86
>gi|260814978|ref|XP_002602190.1| hypothetical protein BRAFLDRAFT_76877 [Branchiostoma floridae]
gi|229287497|gb|EEN58202.1| hypothetical protein BRAFLDRAFT_76877 [Branchiostoma floridae]
Length = 1812
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG R +GD A++Y+ ++E MK + + H ++ SLN +G+ +
Sbjct: 926 IASSLNNLGGAWRNLGDHRKAISYYEQALE--MKRGIYGEDNAHPDIADSLNNLGNARGD 983
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD A SYY +SL +RR + P D+A SL + R++G+ A+ ++
Sbjct: 984 LGDNSKAISYYEQSLQMRRSIYGEDTAHP----DIAASLNNLGSAWRNLGDHGKALCYYE 1039
Query: 349 EAIKRLESL 357
++++ S+
Sbjct: 1040 QSLQMRRSI 1048
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD A++Y+ S++ MKL + + H ++ SLN +G GD
Sbjct: 886 LSNLGGAWSNLGDHRKAISYYEQSLQ--MKLSIYGEDTAHPDIASSLNNLGGAWRNLGDH 943
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY ++L ++R + P D+A SL + + +G+ A+ ++++++
Sbjct: 944 RKAISYYEQALEMKRGIYGEDNAHP----DIADSLNNLGNARGDLGDNSKAISYYEQSLQ 999
Query: 353 RLESL 357
S+
Sbjct: 1000 MRRSI 1004
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LG+ +GD ++Y ++E +M + +D ++ SLN +G+ GD +
Sbjct: 1062 LNNLGNAWGNLGDHRKKISYNEQALEMMMGIYGED-NAHPNIAGSLNNMGNAWGNLGDHR 1120
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
A SYY +SL ++R + P +A SL + +G+ A+ ++++++
Sbjct: 1121 KAISYYEQSLQMKRSIYGEGTIHPG----IAASLYNLGATWSDLGDHRKAISYYEQSLQ 1175
>gi|86740823|ref|YP_481223.1| SARP family transcriptional regulator [Frankia sp. CcI3]
gi|86567685|gb|ABD11494.1| transcriptional regulator, SARP family [Frankia sp. CcI3]
Length = 1071
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 215 DQIERMGNTS-ELCSQLG------AVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMD 267
DQ ER+G + + ++G A LG+LG A GD A Y S+
Sbjct: 782 DQAERIGQEALAIAREVGSPRTEAAALGLLGQIHWAQGDMTVATIYITSSLR-----AAG 836
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
+L + H S SL +G ++ GDL AA+S + ++L V S D ++SL
Sbjct: 837 ELGLHHITSYSLRNLGLVREALGDLDAAKSCFSQALEV--------STRIDSFYDRSISL 888
Query: 328 AKVADVDRSIGNEDVAVDGFQEAI 351
+A V +G+ A++ ++A+
Sbjct: 889 YGLALVHHDVGDNQAALEFAEQAL 912
>gi|55742258|ref|NP_001007159.1| polycomb group RING finger protein 1 [Danio rerio]
gi|82209850|sp|Q7ZYZ7.1|PCGF1_DANRE RecName: Full=Polycomb group RING finger protein 1
gi|126631863|gb|AAI34013.1| Polycomb group ring finger 1 [Danio rerio]
Length = 261
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 43 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 102
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 103 QDIVYKLVPG 112
>gi|344244641|gb|EGW00745.1| Polycomb group RING finger protein 5 [Cricetulus griseus]
Length = 256
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK CI + DCP CG + E + D TL
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 76 EEIIFKLVPG 85
>gi|350644706|emb|CCD60584.1| RING finger protein, putative [Schistosoma mansoni]
Length = 122
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C+ L + T C H +CK+CI ++ ++CP+CG I + + D TL
Sbjct: 20 ITCKLCKGYLIDAVSITECLHPFCKSCIVKYSEEKRECPVCGILIHQSHPLNYMSFDRTL 79
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 80 QDIVYKIV 87
>gi|392575245|gb|EIW68379.1| hypothetical protein TREMEDRAFT_63547 [Tremella mesenterica DSM
1558]
Length = 706
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRFK-----DCPLCGADI----EKIEADTTLQD 141
+C+IC ++ F+ + C H++C C+ + + +CPLC A + +K DTTL +
Sbjct: 610 ACLICTSIAFKPIRLA-CGHLFCVRCLVKMQKAGKGECPLCRAHVVLLADKTSLDTTLMN 668
Query: 142 VVDRFIEGHARIKRSHTNSDKEEDEAGE 169
+ + R+K+ ++ +++A E
Sbjct: 669 FMKSWFPKEVRVKQKENEAEVAKEQAME 696
>gi|260832544|ref|XP_002611217.1| hypothetical protein BRAFLDRAFT_71177 [Branchiostoma floridae]
gi|229296588|gb|EEN67227.1| hypothetical protein BRAFLDRAFT_71177 [Branchiostoma floridae]
Length = 1510
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L +G+CC +GD A++Y S++ + ++ +L ++ SLN IG
Sbjct: 1232 IASSLNNIGNCCNDLGDGWKALSYHEQSLK-MSEVIYGELTPHTEIAASLNNIGTCWSKL 1290
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A +Y +SL +R+ + P D+A SL + + +G++ AV G+ E
Sbjct: 1291 GDQRKAVKHYEQSLRMRKAIHGETTPHP----DIASSLNNIGNCWSDLGDQRKAV-GYHE 1345
Query: 350 AIKRLESLTLKPEEAGLEQRRLSVLEFLNN 379
+SL ++ G + + E LNN
Sbjct: 1346 -----QSLKMRKTIYGETKGHPDIAESLNN 1370
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 198 NVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLG-------------MLGDCCRAM 244
++ S+ + + C D+ DQ + +G + + G +G C +
Sbjct: 1319 DIASSLNNIGNCWSDLGDQRKAVGYHEQSLKMRKTIYGETKGHPDIAESLNNIGHCWSQL 1378
Query: 245 GDADAAVAYFADSVEFLMKLPMDDLEIIHT-----LSVSLNKIGDLKYYGGDLQAARSYY 299
GD AV Y S L MD + T ++ S+N IG Y+ GD + A YY
Sbjct: 1379 GDQRKAVRYHEQS------LKMDKVIYGETTPHPHIAGSVNNIGTCWYFLGDHRKAIRYY 1432
Query: 300 VRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+SL +R+ A+ S V D+A SL + +GN+ A+ +++++ ++ +
Sbjct: 1433 EQSLKMRQ-AIYGESTVHP---DIASSLYNIGACWNELGNQSKALSYLEQSVEMMKVI 1486
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIG-DLKYY 288
+ A L +G+C + GD A++++ S+ + K + ++ SL IG L Y
Sbjct: 1144 IAASLTNIGNCWKDFGDQRKAISHYEQSLN-MTKAIYGETTPHPVIAQSLTNIGLSLSYL 1202
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GG +A R Y+ +SL +R+ + P D+A SL + + +G+ A+ +
Sbjct: 1203 GGQRKAIR-YHEQSLKMRKAIYGETTAHP----DIASSLNNIGNCCNDLGDGWKALSYHE 1257
Query: 349 EAIKRLESL 357
+++K E +
Sbjct: 1258 QSLKMSEVI 1266
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L +G CC+ +GD A++Y S+E + + + H S SLN IG GD +
Sbjct: 928 LNNIGTCCQKLGDQKKAISYHEQSLEMMKAICGETTAHPHIAS-SLNSIGSCWNKLGDQR 986
Query: 294 AARSYYVRSLNVRR---DAVKRHSNVPSQVLDVAVSLAKVADVDRSI 337
A ++ +SL +++ A H ++ S + ++ + D +++
Sbjct: 987 KAIRFHEQSLKMKKAIYGARTAHPDLASSLNNIGKCFGDLGDTRKAL 1033
>gi|225717392|gb|ACO14542.1| Polycomb group RING finger protein 1 [Esox lucius]
Length = 262
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 43 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 102
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 103 QDIVYKLVPG 112
>gi|344255690|gb|EGW11794.1| Polycomb group RING finger protein 1 [Cricetulus griseus]
Length = 512
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|260832494|ref|XP_002611192.1| hypothetical protein BRAFLDRAFT_88408 [Branchiostoma floridae]
gi|229296563|gb|EEN67202.1| hypothetical protein BRAFLDRAFT_88408 [Branchiostoma floridae]
Length = 3083
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG C +GD AV+Y+ S++ MK + H ++ LN +G
Sbjct: 1362 IAASLNNLGTACSNIGDHRKAVSYYEQSLQ--MKRIIYGEGTTHPDIAGPLNNLGIAWSN 1419
Query: 289 GGDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
GD + A SYY +SL+++R + HSN +A SL + + ++G+ AV
Sbjct: 1420 LGDYRKAVSYYEQSLHMKRSIYGKDSAHSN-------IATSLNNLGNAWSNVGDHRKAVS 1472
Query: 346 GFQEAIKRLESL 357
++A++ S+
Sbjct: 1473 YHEQALQMKRSI 1484
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG+ +GD AV+Y +++ MK + + H ++ SLN +G+
Sbjct: 1494 IAASLNNLGNAWSNLGDHRKAVSYHEQALQ--MKRSIYGEDTAHPDIASSLNNLGNAWSN 1551
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL ++R + P D+A S + + ++G+ AV ++
Sbjct: 1552 LGDHRKAVSYHEQSLQMKRSIYGEDTAHP----DIASSFNNLGNAWSNLGDHRKAVSYYE 1607
Query: 349 EAIKRLESL 357
+A++ S+
Sbjct: 1608 QALQMKRSI 1616
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEF-----LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGD 291
LG+ +GD AV+Y+ +++ +M+ + ++ SLN +G GD
Sbjct: 1721 LGNAWSNLGDHRKAVSYYEQALQMRGLSMMMRTIYGENTAHPEIARSLNNLGAAWTNLGD 1780
Query: 292 LQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
+ A SYY +SL + + P D+ SL + + R++G+ AV F++A+
Sbjct: 1781 HRKAVSYYEQSLQMNLGIYGEDTAHP----DIGGSLNDLGEAWRNLGDHKKAVSYFEQAV 1836
Query: 352 KRLESLTLKPEEAGLEQRRLSVLEFLNN 379
+ S+ G E + LNN
Sbjct: 1837 QIYRSI------YGEETEHYEIASALNN 1858
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG +GD AV+Y +++ MK + H ++ SLN +G+
Sbjct: 1626 IASSLNNLGGAWSNVGDHRKAVSYHEQALQ--MKRSIHGENTAHPGIAASLNNLGNAWSN 1683
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL ++R + P D+A S + + ++G+ AV ++
Sbjct: 1684 LGDHRKAVSYHEQSLQMKRSIYGEDTAHP----DIASSFNNLGNAWSNLGDHRKAVSYYE 1739
Query: 349 EAIK 352
+A++
Sbjct: 1740 QALQ 1743
>gi|348511743|ref|XP_003443403.1| PREDICTED: polycomb group RING finger protein 1-like [Oreochromis
niloticus]
Length = 261
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 43 IVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 102
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 103 QDIVYKLVPG 112
>gi|260831370|ref|XP_002610632.1| hypothetical protein BRAFLDRAFT_65821 [Branchiostoma floridae]
gi|229295999|gb|EEN66642.1| hypothetical protein BRAFLDRAFT_65821 [Branchiostoma floridae]
Length = 1466
Score = 45.4 bits (106), Expect = 0.045, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 211 EDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLE 270
E ++ ++ + G+ + + S + L LG C +GD A++YF S++ L + ++
Sbjct: 830 EALQKELVKYGSRA-IHSDIAHSLFKLGYACENLGDYQEAMSYFEQSLQMLQSIHGEN-- 886
Query: 271 IIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAK 329
H ++ ++N +G + YY D + A SY+ ++L + +D + P ++A SL
Sbjct: 887 TAHPDIAAAINSLGAVWYYFRDHRKAASYHKQALQMYQDIYGESTAHP----NIAGSLNN 942
Query: 330 VADVDRSIGNEDVAVDGFQEAIKRLESL 357
+ + +G+ A+ F+++++ S+
Sbjct: 943 LGGISDDLGDHRKALSYFEQSLQMQRSI 970
Score = 38.9 bits (89), Expect = 4.2, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG +GD AV+Y S++ MKL + H ++ SL +G +
Sbjct: 1068 IAAALDSLGTARGKLGDQSKAVSYHKQSLQ--MKLSIYGESTAHPDIANSLICLGTVWSQ 1125
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
G+ + A YY RS ++R + P D+A SL + +GN AV F+
Sbjct: 1126 LGNHRKAAIYYKRSFEMQRSFYGETTAHP----DIAGSLNNLGSAWNDLGNHRQAVGYFE 1181
Query: 349 EAIKRLESL----TLKPEEAGL 366
++++ + T P+ AGL
Sbjct: 1182 QSLQMYRRIYDENTAHPDIAGL 1203
>gi|443894085|dbj|GAC71435.1| predicted E3 ubiquitin ligase [Pseudozyma antarctica T-34]
Length = 1167
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
L C +C LL++ TPC H +CK+C +R D CPLC AD+
Sbjct: 697 LECQLCYLLLYD-PLTTPCGHTFCKSCFARSLDHGDRCPLCRADM 740
>gi|260816978|ref|XP_002603364.1| hypothetical protein BRAFLDRAFT_80357 [Branchiostoma floridae]
gi|229288683|gb|EEN59375.1| hypothetical protein BRAFLDRAFT_80357 [Branchiostoma floridae]
Length = 1387
Score = 45.4 bits (106), Expect = 0.046, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
LG LG+ R +GD AV+Y S++ +M++ + ++ SLN +G+ GD +
Sbjct: 1137 LGNLGNAWRDLGDYKKAVSYHEQSLQ-MMRIIHGENTAHPDIASSLNNLGNAWINLGDYK 1195
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A Y+ +SL ++R ++ P D+A SL + + R +G+ AV +++++
Sbjct: 1196 KAVRYHEQSLQMKRTIHGENTAHP----DIAKSLGNLGNAWRDLGDYKKAVSYHEQSLQM 1251
Query: 354 LESL 357
+ ++
Sbjct: 1252 MRTI 1255
Score = 43.5 bits (101), Expect = 0.19, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
LG LG+ R +GD AV+Y S++ +M+ ++ SLN +G+ GD +
Sbjct: 1049 LGNLGNAWRDLGDYKKAVSYHEQSLQ-MMRTIYGKTTAHPDIASSLNNLGNAWINLGDYK 1107
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A Y+ +SL ++R ++ P D+A SL + + R +G+ AV +++++
Sbjct: 1108 KAVRYHEQSLQMKRTIHGENTAHP----DIAKSLGNLGNAWRDLGDYKKAVSYHEQSLQM 1163
Query: 354 L 354
+
Sbjct: 1164 M 1164
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L LG R +GD AV Y+ S++F+M + + ++ SLN +G +
Sbjct: 1265 IASSLDNLGIAWRTLGDYKKAVIYYQQSLQFMM-ISYGENTAHPDIASSLNNLGIAWWNL 1323
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A +Y+ +SL +RR+ P D+ SL + R++G++ A F E
Sbjct: 1324 GDRRKAVAYFEQSLQMRRNVYYADPAHP----DIISSLQNLEIAWRNLGDDMEADVYFAE 1379
Query: 350 AIKRLES 356
K +++
Sbjct: 1380 MSKMMKN 1386
Score = 39.3 bits (90), Expect = 3.3, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG+ + +G AV+Y S++ M M +H ++ SLN +G+
Sbjct: 957 IAGSLNNLGNAWKNLGHYKKAVSYHEQSLQ--MTWTMYGKNAVHPDIASSLNSLGNAWIN 1014
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A Y+ +SL ++R ++ P D+A SL + + R +G+ AV +
Sbjct: 1015 LGDYKKAVRYHEQSLQMKRTIHGENTAHP----DIAKSLGNLGNAWRDLGDYKKAVSYHE 1070
Query: 349 EAIKRLESL 357
++++ + ++
Sbjct: 1071 QSLQMMRTI 1079
>gi|405957197|gb|EKC23426.1| Polycomb complex protein BMI-1, partial [Crassostrea gigas]
Length = 855
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C++C L + + C H +C+ CI + CP+C + K + +D TL
Sbjct: 21 LTCVLCGGYLIDATTIIECLHSFCRTCIVHYLHTSNYCPVCECLVHKKHPHQNLRSDKTL 80
Query: 140 QDVVDRFIEG 149
QDVV + + G
Sbjct: 81 QDVVYKLVPG 90
>gi|91084985|ref|XP_972531.1| PREDICTED: similar to B lymphoma Mo-MLV insertion region (mouse)
[Tribolium castaneum]
gi|270008538|gb|EFA04986.1| hypothetical protein TcasGA2_TC015065 [Tribolium castaneum]
Length = 328
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C +C+ + + C H +C++CI ++ K CP+C + K I D TL
Sbjct: 16 LICKLCKGYFVDATTIIECLHSFCRSCIVKYLAANKYCPVCDVQVHKSKPLLNIRQDRTL 75
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 76 QDIVYKLV 83
>gi|302771287|ref|XP_002969062.1| hypothetical protein SELMODRAFT_440578 [Selaginella moellendorffii]
gi|300163567|gb|EFJ30178.1| hypothetical protein SELMODRAFT_440578 [Selaginella moellendorffii]
Length = 394
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS-RFKD-----CPLCGAD-----IEKIEADTT 138
L+C +C L E + + C H +CK CI RF D CP+C D +EK+ AD
Sbjct: 24 LTCPLCGNLFREATTISECLHTFCKDCIHDRFSDEETNSCPMCNVDLGTVPLEKLRADPQ 83
Query: 139 LQDV 142
L DV
Sbjct: 84 LDDV 87
>gi|401405547|ref|XP_003882223.1| hypothetical protein NCLIV_019800 [Neospora caninum Liverpool]
gi|325116638|emb|CBZ52191.1| hypothetical protein NCLIV_019800 [Neospora caninum Liverpool]
Length = 713
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI 130
+C+IC+ LLFE SK PCSH++ C+ + + CP C ADI
Sbjct: 300 TCIICRDLLFEGSKKLPCSHIFHIDCLRSWLVQQQSCPTCRADI 343
>gi|407846274|gb|EKG02495.1| hypothetical protein TCSYLVIO_006473 [Trypanosoma cruzi]
Length = 644
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEADTTLQDVVD 144
L+C +C+ L PC HV C ACIS++ K C C A+I ++ +Q V+
Sbjct: 300 LTCPVCRGLFIRPCSAIPCLHVCCAACISQWIDDGHKSCVQCRANIWEVRPAHKIQSCVE 359
Query: 145 RFIEGHARIKRSHTNSDKEEDEAGENKKV 173
++ + ++ R SD E E +N +
Sbjct: 360 ELLKSNPQLAR----SDAELHEFAKNDTI 384
>gi|237845167|ref|XP_002371881.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211969545|gb|EEB04741.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|221480747|gb|EEE19178.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii GT1]
Length = 710
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTT 138
+C+IC+ LLFE SK PCSH++ C+ + + CP C ADI ++ +T
Sbjct: 300 TCIICRDLLFEGSKKLPCSHIFHIDCLRSWLVQQQSCPTCRADIPSDDSPST 351
>gi|444723342|gb|ELW63999.1| Polycomb group RING finger protein 1 [Tupaia chinensis]
Length = 456
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|443728543|gb|ELU14843.1| hypothetical protein CAPTEDRAFT_207553 [Capitella teleta]
Length = 100
Score = 45.4 bits (106), Expect = 0.049, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
L C++C + + T C H +CK CI R+ D CP+C + K I +D L
Sbjct: 16 LICVLCGGYYVDATTITECLHTFCKTCIVRYLDSSKYCPVCDVMVHKTKPLLHIRSDHLL 75
Query: 140 QDVVDRFIEG 149
Q +V + + G
Sbjct: 76 QALVYKMVPG 85
>gi|343425831|emb|CBQ69364.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1176
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
L C +C LL++ TPC H +CK+C +R D CPLC AD+
Sbjct: 694 LECQLCYLLLYD-PLTTPCGHTFCKSCFARSLDHGDRCPLCRADM 737
>gi|297266344|ref|XP_001105519.2| PREDICTED: polycomb group RING finger protein 1-like [Macaca
mulatta]
Length = 394
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|260805256|ref|XP_002597503.1| hypothetical protein BRAFLDRAFT_78939 [Branchiostoma floridae]
gi|229282768|gb|EEN53515.1| hypothetical protein BRAFLDRAFT_78939 [Branchiostoma floridae]
Length = 1727
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 228 SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLK 286
S + L LG + +GD AVAY+ S++ M+L + H ++ SLN +G +
Sbjct: 1590 SNIAHSLNNLGIAWKNLGDHRKAVAYYNQSLK--MRLSIYGKTNAHPDIAASLNNLGTVW 1647
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
GD + A SYY +SL ++R + + + +A+SL +++V +G+++ A D
Sbjct: 1648 RDLGDYRKAASYYEQSLQMQRSIYGEN----TAHISMAISLNNLSNVWSRLGDQEKAND 1702
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMD---DLEIIHTLSVSLNKIGDLKYYGGDLQ 293
LG+ +GD A+ Y+ +S++ +L D D I H SLN +G GD +
Sbjct: 1555 LGNAWLGLGDNKKAINYYEESLQMRRELYGDGAADSNIAH----SLNNLGIAWKNLGDHR 1610
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A +YY +SL +R + + P D+A SL + V R +G+ A ++++++
Sbjct: 1611 KAVAYYNQSLKMRLSIYGKTNAHP----DIAASLNNLGTVWRDLGDYRKAASYYEQSLQM 1666
Query: 354 LESL 357
S+
Sbjct: 1667 QRSI 1670
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG R +GD A++Y S+ LM+ + H +++SLN +G GD
Sbjct: 1115 LNNLGVAWRDLGDHRKAISYHQRSL--LMRQSIYGATTAHPDIAMSLNNLGIAWRDLGDY 1172
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A +YYV+SL +R +++ P D+A S + +G+ A+ ++ A++
Sbjct: 1173 KKAITYYVKSLQMRVSVYGENAH-P----DIASSFNNLGTAKEELGDHKKAIFYYEHALQ 1227
>gi|357115770|ref|XP_003559659.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 502
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
++C +C LL + + + C H +C+ CI +F D CP+C D +EK+ AD +
Sbjct: 98 MTCPLCNRLLRDATTISECLHTFCRRCIYQKFNDEEVESCPVCKIDLGCTPVEKLRADHS 157
Query: 139 LQDVVDRFI 147
L DV +
Sbjct: 158 LHDVRSKIF 166
>gi|260811630|ref|XP_002600525.1| hypothetical protein BRAFLDRAFT_70102 [Branchiostoma floridae]
gi|229285812|gb|EEN56537.1| hypothetical protein BRAFLDRAFT_70102 [Branchiostoma floridae]
Length = 358
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG+ C +GD AV+Y S++ MK + H ++ SLN +G+
Sbjct: 15 IASSLNNLGNACSDLGDYKKAVSYHEQSLQ--MKRIIYGENTAHPDIASSLNNLGNAWSD 72
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ RSL ++R ++ P D+A SL + R++G+ AV +
Sbjct: 73 LGDHKKAVSYHERSLQMKRTIYGENTAHP----DIASSLNNLGKACRNLGDYKKAVSYHE 128
Query: 349 EAIKRLESL 357
++++ + ++
Sbjct: 129 QSLQMMRTI 137
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + LG LG+ +GD AV+Y S++ + + +++ H SV LN +G +
Sbjct: 279 IASSLGNLGNAWLNLGDHRKAVSYHEQSLQMMRTIYVENTAHPHIASV-LNNLGIAWRHL 337
Query: 290 GDLQAARSYYVRSLNVRRD 308
GDLQ A SY+ +S +++RD
Sbjct: 338 GDLQKAVSYHKQSQHMKRD 356
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ + L LG CR +GD AV+Y S++ + + ++ H+ ++ SL+ +G
Sbjct: 103 IASSLNNLGKACRNLGDYKKAVSYHEQSLQMMRTIYGEN--TAHSDIASSLDNLGIAWMN 160
Query: 289 GGDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDRSI 337
GD + A SY+ +SL + R HS++ S + ++ ++ + D +++
Sbjct: 161 LGDHKKAVSYHEQSLQMMRTIYGENTAHSDIASSLDNLGIAWMNLGDHKKAV 212
>gi|260781717|ref|XP_002585948.1| hypothetical protein BRAFLDRAFT_110561 [Branchiostoma floridae]
gi|229271020|gb|EEN41959.1| hypothetical protein BRAFLDRAFT_110561 [Branchiostoma floridae]
Length = 830
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L LG+ +G+ A +Y S++ + + ++ H S SL +G+ +
Sbjct: 651 IASSLNNLGNAWMDLGNHKKAASYHLQSLQMMQTIYGENTAHPHIAS-SLGNLGNAWRHL 709
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SY+ +SL +RR ++ P D+A SL + R IG+ AV+ ++
Sbjct: 710 GDHKKAASYHEQSLQMRRTIYGENTAHP----DIASSLTNLGLARRDIGDHKKAVNCHEQ 765
Query: 350 AIK 352
+++
Sbjct: 766 SLQ 768
>gi|260781995|ref|XP_002586079.1| hypothetical protein BRAFLDRAFT_110037 [Branchiostoma floridae]
gi|229271167|gb|EEN42090.1| hypothetical protein BRAFLDRAFT_110037 [Branchiostoma floridae]
Length = 975
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L LG +GD AV+Y S + L+ + ++ H S SL +G+ +
Sbjct: 633 IASSLNNLGATWMDLGDPKKAVSYHEQSRQMLLTIYGENTAHPHIAS-SLGNLGNAWRHL 691
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
D + A SY+ +SL +RR ++ P D+A SL + V R +G+ AV+ ++
Sbjct: 692 SDHKKAASYHEQSLQMRRTIYGENTAHP----DIASSLTNLGLVCRDLGDYKKAVNCHEQ 747
Query: 350 AIKRLESL----TLKPEEA 364
+++ + ++ T PE A
Sbjct: 748 SLQMMRTIYGENTAHPEIA 766
>gi|395547126|ref|XP_003775152.1| PREDICTED: uncharacterized protein LOC100931444, partial [Sarcophilus
harrisii]
Length = 1797
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 75 KCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
K PF QSF L C +C L +E TPC H +C C+ + D CPLC D+
Sbjct: 1470 KVPF----QSFDPSDLDCPLCMRLFYE-PVTTPCGHTFCMKCLEKSLDRSPICPLCKEDL 1524
Query: 131 EK 132
E+
Sbjct: 1525 EE 1526
>gi|260795444|ref|XP_002592715.1| hypothetical protein BRAFLDRAFT_67155 [Branchiostoma floridae]
gi|229277938|gb|EEN48726.1| hypothetical protein BRAFLDRAFT_67155 [Branchiostoma floridae]
Length = 1184
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 45/248 (18%)
Query: 165 DEAGENKKVIYEDVSMERGAFL-----VQQAMRAFRAQ---------------NVESAKS 204
D+AG ++K +E + E G L ++AM FR N+ S +
Sbjct: 809 DDAGSDEKKQFE-ILFELGKILQKSGESKKAMDYFRRALIVGNTIYGESKEHPNIVSLFA 867
Query: 205 RLSLCTEDIRDQIERMGNTSELCSQLGAVLG-------------MLGDCCRAMGDADAAV 251
+ +C + DQ E + + A+ G +G C +GD A+
Sbjct: 868 NIGVCWSHLGDQNEALLYLEQSLKMEKAIFGETTAHRGIAGSLNNIGGCWSNLGDRGKAI 927
Query: 252 AYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVK 311
Y+ S++ +MK+ + ++ SLN IG Y GD + A YY +SL +R+
Sbjct: 928 NYYEQSLK-MMKVIYGNTAAHPDIAASLNNIGMCLYDLGDKRKAIWYYEQSLKMRKAIYG 986
Query: 312 RHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRL 371
+ P D+A SL + G++ A+ +++++K ++ G L
Sbjct: 987 EKTAHP----DIASSLNNIGRCCSDFGDQRKALRYYEQSLK------MEKAVYGETTEHL 1036
Query: 372 SVLEFLNN 379
+V LNN
Sbjct: 1037 AVAILLNN 1044
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 221 GNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSL 279
G T+E + + +L +GDC +GD A+ Y S++ MK + H ++ SL
Sbjct: 1030 GETTEHLA-VAILLNNIGDCWSHLGDKKKALMYHEQSLK--MKKAIFGETTAHLEIAGSL 1086
Query: 280 NKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGN 339
IG+ Y GD + A Y+ +SL +R+ + P D+A SL + ++GN
Sbjct: 1087 YNIGNCWIYLGDQRKALRYHEQSLKMRKAIYGETTAHP----DIAGSLNSIGACWCNVGN 1142
Query: 340 EDVAVDGFQEAIK 352
+++ F++++K
Sbjct: 1143 LSKSLNYFEQSVK 1155
>gi|260833076|ref|XP_002611483.1| hypothetical protein BRAFLDRAFT_63882 [Branchiostoma floridae]
gi|229296854|gb|EEN67493.1| hypothetical protein BRAFLDRAFT_63882 [Branchiostoma floridae]
Length = 1622
Score = 45.1 bits (105), Expect = 0.055, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LG+ C +GD AV+Y S++ + D + +++ L+K+G GD + A
Sbjct: 1325 LGEACSNLGDHRKAVSYHEQSLQMWQHIYGQDTAHVVIIAL-LDKLGAAWSILGDHRKAV 1383
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
SYY +SL + R + + P D+A SL +A R++G++ AV +++ ++
Sbjct: 1384 SYYEQSLRMTRSIYGKDTAHP----DIADSLNNLAGAWRNLGDQRKAVSYYEQLLQ 1435
>gi|335310501|ref|XP_003362064.1| PREDICTED: polycomb group RING finger protein 2-like [Sus scrofa]
Length = 364
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVY--CKACISRF----KDCPLCGADIEK------IEADT 137
L C +C L E S + H CK CI R+ K CP+C + K I +D
Sbjct: 68 LMCALCGGYLIEASDSSSSLHTLQVCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDK 127
Query: 138 TLQDVVDRFIEG 149
TLQD+V + + G
Sbjct: 128 TLQDIVYKLVPG 139
>gi|388856291|emb|CCF50100.1| uncharacterized protein [Ustilago hordei]
Length = 1174
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
L C +C LL++ TPC H +CK+C +R D CPLC AD+
Sbjct: 688 LECQLCYLLLYD-PLTTPCGHTFCKSCFARSLDHADRCPLCRADM 731
>gi|270008553|gb|EFA05001.1| hypothetical protein TcasGA2_TC015080 [Tribolium castaneum]
Length = 334
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDR 145
L+C IC L + CSH +CK CI R+ +CP+C I I L + +++
Sbjct: 163 LTCSICSELFIKAVTLN-CSHTFCKFCIDRWMKNKSNCPICRKSITNIAPTLVLDNFIEK 221
Query: 146 FIEGHA-RIKRSHTNSDKEEDEAGEN 170
FI+ + +K + N ++ +E N
Sbjct: 222 FIKTQSDDVKETRKNLIQQREEMVVN 247
>gi|55925492|ref|NP_991116.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Danio rerio]
gi|41351026|gb|AAH65643.1| Zgc:55936 [Danio rerio]
Length = 531
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L C IC L E C+H +C+ CIS +++ CP+C +I L + +DR
Sbjct: 390 LQCSICSELFIEAVTLN-CAHSFCQHCISEWRNRKDKCPMCWQNITSQTRSLVLDNCIDR 448
Query: 146 FIEG 149
+E
Sbjct: 449 MVEN 452
>gi|260832438|ref|XP_002611164.1| hypothetical protein BRAFLDRAFT_88437 [Branchiostoma floridae]
gi|229296535|gb|EEN67174.1| hypothetical protein BRAFLDRAFT_88437 [Branchiostoma floridae]
Length = 250
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ L +G+C R +G+ A+ Y S+ +MK + + SLN IG+
Sbjct: 15 IAGSLNNIGNCWRDLGNKREAIRYHEQSL-MMMKSIYGETTAHPDFASSLNNIGNCWSDF 73
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A YY +SL +++ + LD+A SL + + +G++ A+ ++
Sbjct: 74 GDKRKAIWYYEQSLKMKKAIYGE----TTAHLDIAGSLNNIGNCWSDLGDQRKAIRYHEQ 129
Query: 350 AIKRLESL----TLKPEEAG 365
++K ++++ T PE AG
Sbjct: 130 SLKMIKAIYGETTAHPEIAG 149
>gi|71659231|ref|XP_821339.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70886716|gb|EAN99488.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 535
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEADTTLQDVVD 144
L+C +C+ L PC HV C ACIS++ K C C A+I ++ +Q V+
Sbjct: 191 LTCPVCRGLFIRPCSTIPCLHVCCAACISQWVDAGHKSCVQCRANIWEVRPAHKIQSCVE 250
Query: 145 RFIEGHARIKRS 156
++ + ++ RS
Sbjct: 251 ELLKSNPQLARS 262
>gi|410904257|ref|XP_003965608.1| PREDICTED: E3 ubiquitin-protein ligase UHRF2-like [Takifugu
rubripes]
Length = 856
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISR-FK----DCPLCGADIEK---IEADTTLQDVV 143
C+ CQ L F+ T C+H CK C+ R F+ CP C D+ K + +TTLQ ++
Sbjct: 787 CVCCQELAFQ-PITTICTHNVCKTCLQRSFRAKVYTCPACRHDLGKDYIMTQNTTLQKLL 845
Query: 144 DRFIEGHAR 152
D+F G+++
Sbjct: 846 DQFFPGYSK 854
>gi|198426367|ref|XP_002131146.1| PREDICTED: similar to ring finger protein isoform 1 [Ciona
intestinalis]
Length = 243
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 17/88 (19%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD----CPLCGADI------EKIEADTT 138
++C +C L + + T C H +CK+CI S +D CP C A I + + D T
Sbjct: 31 ITCYLCHGYLIDATTITECLHTFCKSCIVSHVEDGRNECPKCEAVIHHSYPLQYLAYDRT 90
Query: 139 LQDVVDRFI------EGHARIKRSHTNS 160
+QD+V++ + E RI+ H N+
Sbjct: 91 MQDIVEKLVPKLKQSEWSRRIQFCHKNN 118
>gi|189502333|ref|YP_001958050.1| hypothetical protein Aasi_0963 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497774|gb|ACE06321.1| hypothetical protein Aasi_0963 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1550
Score = 45.1 bits (105), Expect = 0.065, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 220 MGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSL 279
MGN + L + G+ A+G A+ Y ++E L + S+SL
Sbjct: 1338 MGNHPSMAISLNNI----GNIYTALGQYQEALKYLKQALEMRQALFTGNHP---QTSISL 1390
Query: 280 NKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGN 339
N +GD G+ Q A YY ++L +R+ N P D+A+SL + V +++G
Sbjct: 1391 NDLGDFYQASGEYQEALKYYQQALTMRQSLYT--GNHP----DIAISLNSIGYVYQTLGQ 1444
Query: 340 EDVAVDGFQEAI 351
A+ +Q+A+
Sbjct: 1445 HQEALKYYQQAL 1456
Score = 41.6 bits (96), Expect = 0.71, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 146 FIEGHARIKRSHTNSD---KEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESA 202
+ + H R+ +S+ N K + E K + + M++ ++ A N+ +
Sbjct: 1295 YTDKHHRVAQSYNNVGSVYKSLKQYQEALKYYQQALDMKKSLYMGNHPSMAISLNNIGNI 1354
Query: 203 KSRLSLCTEDIRDQIERMGNTSELCS----QLGAVLGMLGDCCRAMGDADAAVAYFADSV 258
+ L E ++ + + L + Q L LGD +A G+ A+ Y+ ++
Sbjct: 1355 YTALGQYQEALKYLKQALEMRQALFTGNHPQTSISLNDLGDFYQASGEYQEALKYYQQAL 1414
Query: 259 EFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPS 318
L + I ++SLN IG + G Q A YY ++LN+ + N P
Sbjct: 1415 TMRQSLYTGNHPDI---AISLNSIGYVYQTLGQHQEALKYYQQALNMWKCVYT--GNHPK 1469
Query: 319 QVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+A+SL + V +++G AV +Q+A+ ++L
Sbjct: 1470 ----IAISLNNLGSVYQALGEHQEAVKYYQQALVMRQAL 1504
Score = 39.7 bits (91), Expect = 2.4, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
+++SLN +G + G+ Q A YY ++L V R + P D+ +SL K+ D+
Sbjct: 1470 IAISLNNLGSVYQALGEHQEAVKYYQQAL------VMRQALYPCNHPDIVISLNKLGDIY 1523
Query: 335 RSIGNEDVAVDGFQEAIKRLESL 357
++G A+ +Q+A+ ++L
Sbjct: 1524 TALGQHQEALTCYQQALVMRQAL 1546
>gi|392355796|ref|XP_003752135.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 209
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIE------KIEADTTL 139
+SC IC+ L + + T C H +CK+CI + + CP C + + D L
Sbjct: 98 ISCSICKGYLIDATAITECLHTFCKSCIVKHFEHSNRCPKCNIIVHDAKPHNNLRMDPQL 157
Query: 140 QDVVDRFIEG 149
Q++V + +EG
Sbjct: 158 QNIVYKLVEG 167
>gi|242086134|ref|XP_002443492.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
gi|241944185|gb|EES17330.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
Length = 489
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 15/86 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGAD-----IEKIEADTT 138
L+C +C LL + + + C H +C+ CI + CP+C D ++K+ AD
Sbjct: 86 LTCPLCDRLLRKATTISECLHTFCRKCIYKKLNDEDLDHCPVCNIDLGCTPVDKLRADHN 145
Query: 139 LQDVVDRFIEGHARIKRSHTNSDKEE 164
+QDV + KR N+++ E
Sbjct: 146 IQDVRSKVFP----FKRKKVNAEEAE 167
>gi|192455614|ref|NP_001122184.1| polycomb group RING finger protein 5-A [Danio rerio]
gi|306755928|sp|B3DK16.1|PCF5A_DANRE RecName: Full=Polycomb group RING finger protein 5-A
gi|190338518|gb|AAI63687.1| Zgc:194668 [Danio rerio]
gi|190338958|gb|AAI63702.1| Zgc:194668 [Danio rerio]
Length = 234
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK+CI + +CP CG + E + D TL
Sbjct: 16 ITCSICRGYLIKPTAVTECLHTFCKSCIVQHFEESNECPECGIQVHETNPLEMLRLDKTL 75
Query: 140 QDVVDRFIEGHARIKRSHTNSD 161
++++ + + G R K H S+
Sbjct: 76 EEIIFKLVPG-LREKEEHQESE 96
>gi|328791939|ref|XP_395138.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Apis mellifera]
Length = 538
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 25 NKYPAECPFSKARPDDAASRKAVENSAKPQA-----EHDGDKAKSDSMDSASI--PPKCP 77
N E F++ S A +N+ K QA D +K K SA I PP
Sbjct: 140 NSSGGEEEFTQTVSRRLLSTTAPQNNVKLQAGLDHLYQDIEKLKRLETRSAEILLPP--- 196
Query: 78 FGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
G L C++C LL++ TPC H YC C+ R D CPLC +
Sbjct: 197 ----LSGGTAGELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADY 251
Query: 134 EADTTLQDVVDRFIE 148
A + Q V FIE
Sbjct: 252 LASS--QKTVTDFIE 264
>gi|55925478|ref|NP_991329.1| E3 ubiquitin-protein ligase RNF8 isoform 2 [Danio rerio]
gi|82210116|sp|Q803C1.1|RNF8_DANRE RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING
finger protein 8
gi|27882568|gb|AAH44545.1| Zgc:55936 [Danio rerio]
Length = 485
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L C IC L E C+H +C+ CIS +++ CP+C +I L + +DR
Sbjct: 390 LQCSICSELFIEAVTLN-CAHSFCQHCISEWRNRKDKCPMCWQNITSQTRSLVLDNCIDR 448
Query: 146 FIEG 149
+E
Sbjct: 449 MVEN 452
>gi|242009130|ref|XP_002425345.1| polycomb complex protein bmi-1, putative [Pediculus humanus
corporis]
gi|212509130|gb|EEB12607.1| polycomb complex protein bmi-1, putative [Pediculus humanus
corporis]
Length = 886
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +C++CI + K CP+C + K I D TL
Sbjct: 19 LMCVLCGGYYIDATTIVECLHSFCRSCIVKHLESSKYCPICEVQVHKTKPLLNIRPDKTL 78
Query: 140 QDVVDRFIEG 149
Q++V + + G
Sbjct: 79 QNIVYKLVPG 88
>gi|221501435|gb|EEE27212.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 710
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI 130
+C+IC+ LLFE SK PCSH++ C+ + + CP C ADI
Sbjct: 300 TCIICRDLLFEGSKKLPCSHIFHIDCLRSWLVQQQSCPTCRADI 343
>gi|260785256|ref|XP_002587678.1| hypothetical protein BRAFLDRAFT_92722 [Branchiostoma floridae]
gi|229272829|gb|EEN43689.1| hypothetical protein BRAFLDRAFT_92722 [Branchiostoma floridae]
Length = 1009
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A LG LG C +GD+ +++Y+ S+ + D+ H ++ SLN +G
Sbjct: 865 IAASLGNLGSCWYHLGDSKKSISYYEQSLSMWKTIHGDNKG--HPDIASSLNNLGLSSSD 922
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL++R+ ++ P D+A SL + +G+ A+ +
Sbjct: 923 LGDHKKALSYHEQSLSMRKSIYGENTAHP----DIAASLGNLGSCWYYLGDHKKAISYHE 978
Query: 349 EAI 351
+++
Sbjct: 979 QSV 981
>gi|260817350|ref|XP_002603550.1| hypothetical protein BRAFLDRAFT_79082 [Branchiostoma floridae]
gi|229288869|gb|EEN59561.1| hypothetical protein BRAFLDRAFT_79082 [Branchiostoma floridae]
Length = 834
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 209 CTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDD 268
C E++ + + + + L LG C +GD + A +Y S++ ++ + ++
Sbjct: 652 CLEELLENYHSRYGQAFIHPDIAQTLAKLGIACHNIGDHNNAASYHEQSLQMMLTIFGEN 711
Query: 269 LEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
H ++ SL +G+ GD + A S+Y +SL + R S P D+A+SL
Sbjct: 712 --TAHPKITRSLGLMGNAWMRLGDHKKAVSFYEQSLQMWRTIYGETSPHP----DIALSL 765
Query: 328 AKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+ + R++G+ AV +++++ + ++
Sbjct: 766 GNLGNACRALGDHKKAVSYQEQSLQMMRTI 795
>gi|213512886|ref|NP_001135231.1| Tripartite motif-containing protein 39 [Salmo salar]
gi|209154784|gb|ACI33624.1| Tripartite motif-containing protein 39 [Salmo salar]
Length = 424
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD-----CPLCGADIEK---IEADTTLQD 141
L C IC L F TPC H +CK+CIS + D CPLC +K + +T + +
Sbjct: 11 LRCSICLDL-FVHPVSTPCGHNFCKSCISDYWDIREAICPLCKETFKKRPDLHVNTFINE 69
Query: 142 VVDRF 146
++++F
Sbjct: 70 IINQF 74
>gi|198414702|ref|XP_002129324.1| PREDICTED: similar to Polycomb complex protein BMI-1 (Polycomb
group RING finger protein 4) (RING finger protein 51)
[Ciona intestinalis]
Length = 1188
Score = 45.1 bits (105), Expect = 0.069, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C + + C H +C+ CI R+ + CP+C + K I +D TL
Sbjct: 16 VTCHLCNGYFIDATTIIECLHSFCRTCIVRYLENRRSCPVCRVQVHKTRPLLNIRSDQTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVPG 85
>gi|118350581|ref|XP_001008570.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89290337|gb|EAR88325.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1476
Score = 44.7 bits (104), Expect = 0.071, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 101/241 (41%), Gaps = 47/241 (19%)
Query: 136 DTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAM---R 192
+ +LQ D F+E H I S N+ + G+N+K + +QQ++ R
Sbjct: 1125 EKSLQMTKDVFVENHIDIANSLDNAGECYYYFGDNQKALE----------YLQQSLKIKR 1174
Query: 193 AFRAQNVESAKSRLSLC-------------------TEDIRDQIERMGNTSELCSQLGAV 233
F +N S L+L +I + + N + + + ++
Sbjct: 1175 QFYKENHISIAETLNLIGLCYIQFDQNEIALNFLLEALEIEQSLIEIKNNQSVANYMNSI 1234
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
G C + +G A+ Y+ S+ +L + ++ SLN IG+ Y G+ +
Sbjct: 1235 ----GTCYQYLGHYQKALDYYEKSLNIRRQLFQKNHP---NIAQSLNNIGNYYYIKGEYK 1287
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSI--GNEDVAVDGFQEAI 351
+ +Y + SL +R+ K D+A SL ++ + R + GN+ A++ F+E++
Sbjct: 1288 KSLNYLLESLEIRKQLFKEDHP------DIAHSLNTISQILRKLDSGNDQKALEYFRESL 1341
Query: 352 K 352
K
Sbjct: 1342 K 1342
>gi|345309822|ref|XP_001506338.2| PREDICTED: E3 ubiquitin-protein ligase RNF180-like [Ornithorhynchus
anatinus]
Length = 321
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C+PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 161 CAVCLDVYFNPYMCSPCQHIFCEPCLRTLAKDNAASTPCPLCRTIISRVFFQTDLNNATK 220
Query: 145 R-FIEGHARIKRSHTNSD 161
F E +++IK+S S+
Sbjct: 221 AVFPEEYSKIKQSFQKSN 238
>gi|260814956|ref|XP_002602179.1| hypothetical protein BRAFLDRAFT_76867 [Branchiostoma floridae]
gi|229287486|gb|EEN58191.1| hypothetical protein BRAFLDRAFT_76867 [Branchiostoma floridae]
Length = 1211
Score = 44.7 bits (104), Expect = 0.076, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 19/131 (14%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDL---EIIHTLSVSLNKIG----DLK 286
L +G C +GD A++Y+ S++ + +D +I H SLN +G +L
Sbjct: 707 LNNMGIACSKLGDYGKAISYYEQSLQMRRSIYGEDTAHPDIAH----SLNNMGIAWWNLG 762
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
YYG A SYY +SL +RR + P +A SL + + S+G+ A+
Sbjct: 763 YYG----KAISYYEQSLQMRRSIYGEDTAHPY----IADSLDSLGNAWGSLGDHRKAISY 814
Query: 347 FQEAIKRLESL 357
+++A++ + S+
Sbjct: 815 YEQALQMMRSV 825
Score = 40.4 bits (93), Expect = 1.6, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
+G+ +GD AV+Y+ S++ ++ +D I H +++SLN +G GD A
Sbjct: 666 MGNAWLNLGDYTKAVSYYKQSLQITRRIYGED--IAHPDIAISLNNMGIACSKLGDYGKA 723
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
SYY +SL +RR + P D+A SL + ++G A+ ++++++
Sbjct: 724 ISYYEQSLQMRRSIYGEDTAHP----DIAHSLNNMGIAWWNLGYYGKAISYYEQSLQMRR 779
Query: 356 SL 357
S+
Sbjct: 780 SI 781
>gi|384252284|gb|EIE25760.1| hypothetical protein COCSUDRAFT_60776 [Coccomyxa subellipsoidea
C-169]
Length = 480
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIE---KIEADTTLQDVVD 144
C++C LL+E TPC H +C+AC +R D CP+C + ++ L V++
Sbjct: 183 CILCMKLLYE-PVTTPCGHTFCRACFARTTDHSNKCPMCRTVLHVGRQLPVTVALASVLE 241
Query: 145 RFI--EGHARIKRSHTNSDKEEDEAGE 169
R E AR S + + + AGE
Sbjct: 242 RSFPDEYAARRDESRSTAAQGTPAAGE 268
>gi|344283744|ref|XP_003413631.1| PREDICTED: polycomb group RING finger protein 1-like [Loxodonta
africana]
Length = 447
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 233 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 292
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 293 QDIVYKLVPG 302
>gi|291407849|ref|XP_002720257.1| PREDICTED: LON peptidase N-terminal domain and ring finger 3
[Oryctolagus cuniculus]
Length = 734
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 74 PKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGAD 129
PK F SF L C +C L +E TPC H +C C+ R D CPLC
Sbjct: 424 PKPAFNIPLASFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDG 482
Query: 130 I------EKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ K + +++++ +F+ + +R + EE
Sbjct: 483 LAQCLASRKYSKNVIMEELIAKFLPEELKERRRLYEEEMEE 523
>gi|328794198|ref|XP_001123162.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like, partial [Apis mellifera]
Length = 358
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 25 NKYPAECPFSKARPDDAASRKAVENSAKPQA-----EHDGDKAKSDSMDSASI--PPKCP 77
N E F++ S A +N+ K QA D +K K SA I PP
Sbjct: 56 NSSGGEEEFTQTVSRRLLSTTAPQNNVKLQAGLDHLYQDIEKLKRLETRSAEILLPP--- 112
Query: 78 FGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
G L C++C LL++ TPC H YC C+ R D CPLC +
Sbjct: 113 ----LSGGTAGELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADY 167
Query: 134 EADTTLQDVVDRFIE 148
A + Q V FIE
Sbjct: 168 LASS--QKTVTDFIE 180
>gi|260818136|ref|XP_002603940.1| hypothetical protein BRAFLDRAFT_102379 [Branchiostoma floridae]
gi|229289265|gb|EEN59951.1| hypothetical protein BRAFLDRAFT_102379 [Branchiostoma floridae]
Length = 1443
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ +L +G +GD A++YF V F M + +HT ++ SLN +G ++
Sbjct: 899 IAGLLNNMGGAWSHLGDYRKALSYF--EVAFQMLRSVHGQSTVHTDIATSLNNLGGAWHH 956
Query: 289 GGDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
GD + A SY+ ++L + R H + ++ SL + D +S+ ++ A+
Sbjct: 957 LGDYRKATSYHEQALQMYRSVYGHNTAHPTIAKSFNNLGASLRQQGDYRKSLRYDEQALQ 1016
Query: 346 GFQ 348
++
Sbjct: 1017 MYR 1019
>gi|383857691|ref|XP_003704337.1| PREDICTED: uncharacterized protein LOC100877658 [Megachile
rotundata]
Length = 1539
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK----IEADTTLQD 141
L C +C+ L + + C H +C++CI + + CP C + K I+AD LQD
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLNTEAHCPSCKHVLNKAKPNIKADKALQD 76
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 77 IVYKLVPG 84
>gi|350426618|ref|XP_003494492.1| PREDICTED: hypothetical protein LOC100746715 [Bombus impatiens]
Length = 1821
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLCGADIEK----IEADTTLQD 141
L C +C L + + C H +C++CI +R CP C + K I+AD LQD
Sbjct: 17 LICPLCIGYLIDATTVVECLHSFCRSCILKHLNREAYCPSCKHVLNKAKPNIKADKALQD 76
Query: 142 VVDRFIEG--HARIKR 155
+V + + G H ++R
Sbjct: 77 IVYKLVPGLYHKEMRR 92
>gi|291228049|ref|XP_002733998.1| PREDICTED: lethal (3) 73Ah-like [Saccoglossus kowalevskii]
Length = 321
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +CK+CI ++ + CP C I + I D T+
Sbjct: 68 ITCQLCGGYLVDATTITECLHTFCKSCIVKYLETSILCPTCDVKIHETWPYYSIRLDRTM 127
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 128 QDIVHKLL 135
>gi|260827479|ref|XP_002608692.1| hypothetical protein BRAFLDRAFT_73914 [Branchiostoma floridae]
gi|229294044|gb|EEN64702.1| hypothetical protein BRAFLDRAFT_73914 [Branchiostoma floridae]
Length = 1740
Score = 44.7 bits (104), Expect = 0.082, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 198 NVESAKSRLSLCTEDIRDQIERMG-------------NTSELCSQLGAVLGMLGDCCRAM 244
N+ ++ + + LC ++ DQ + + + + ++ + L +G CC +
Sbjct: 1197 NIATSLNSIGLCWSELGDQRKAISCYEQSLKMRKAVYGETTIHPEIASSLNNIGKCCSKL 1256
Query: 245 GDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLN 304
GD + A++Y+ S++ + K + ++ SLN IG GD A YY +SL
Sbjct: 1257 GDQNKAISYYEQSLK-MSKTIYGETATHPNIATSLNNIGTSWSELGDRMKAIRYYEQSLQ 1315
Query: 305 VRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+++ + P D+A SL + +G++ A+ ++++K
Sbjct: 1316 MKKAMYGETTAHP----DIASSLHNIGACWSELGDQSKAIRYNEKSLK 1359
Score = 40.8 bits (94), Expect = 1.3, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L +G C R +GD AV Y S++ + K + ++ SLN IG
Sbjct: 1154 IASSLNNIGSCLRKLGDQRKAVNYHEQSLK-MAKAVYGETTAHPNIATSLNSIGLCWSEL 1212
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A S Y +SL +R+ + P ++A SL + +G+++ A+ +++
Sbjct: 1213 GDQRKAISCYEQSLKMRKAVYGETTIHP----EIASSLNNIGKCCSKLGDQNKAISYYEQ 1268
Query: 350 AIK 352
++K
Sbjct: 1269 SLK 1271
Score = 38.9 bits (89), Expect = 4.7, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 228 SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLK 286
S + + +G C +GD A++Y+ S++ MK + H ++ SL+ IG
Sbjct: 1372 SDIASSFNNIGACYSKLGDQKKAISYYEQSLK--MKKAIYGETTAHPGIASSLDNIGVCW 1429
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
GD A Y+ +SL + R + P D A SL +A R +G+ A++
Sbjct: 1430 SELGDQSKAIRYHDQSLKMTRTIYGETTEHP----DTASSLHNIATCLRKLGDHVKAIEY 1485
Query: 347 FQEAIK 352
+++++K
Sbjct: 1486 YEQSLK 1491
Score = 38.1 bits (87), Expect = 6.7, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L + C R +GD A+ Y+ S++ + ++ + T + SLN IG+ GD +
Sbjct: 1510 LTNIATCWRKLGDQSKAICYYEQSLKMVKEVYGETTAHPDT-AASLNDIGNCWNQIGDHR 1568
Query: 294 AARSYYVRSLNVRR---DAVKRHSNVPSQVLDVAVSLAKVADVDRSI 337
A SYY +SL +++ H+ + S + ++ +++ D ++I
Sbjct: 1569 KAISYYEQSLQMKKIIYGETTAHAGIASTLNNIGACYSRLGDQRKAI 1615
Score = 37.7 bits (86), Expect = 8.7, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 231 GAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGG 290
A L +G+C +GD A++Y+ S++ + K+ + ++ +LN IG G
Sbjct: 1551 AASLNDIGNCWNQIGDHRKAISYYEQSLQ-MKKIIYGETTAHAGIASTLNNIGACYSRLG 1609
Query: 291 DLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEA 350
D + A YY +SL + + + + P ++A +L + ++GN+ A+ ++ +
Sbjct: 1610 DQRKAIIYYEQSLKMSKTIYGKTTAHP----NIASALNNIGTCWSNLGNQSEAISYYETS 1665
Query: 351 IK 352
++
Sbjct: 1666 LE 1667
Score = 37.7 bits (86), Expect = 9.0, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L +G C +GD A+ Y+ S++ + K ++ +LN IG
Sbjct: 1594 IASTLNNIGACYSRLGDQRKAIIYYEQSLK-MSKTIYGKTTAHPNIASALNNIGTCWSNL 1652
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
G+ A SYY SL +++ + P D+A SL + +GN+ A+ +++
Sbjct: 1653 GNQSEAISYYETSLEMKKAIYGETTAHP----DIASSLKNIGACWYELGNQSKAIKYYEQ 1708
Query: 350 AIKRLE 355
+++ L+
Sbjct: 1709 SLEMLK 1714
>gi|449018179|dbj|BAM81581.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 437
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 81 DAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLC 126
D Q+F+ L C +C LL+E TPC H +C++C++R D CP+C
Sbjct: 5 DEQNFERYGLDCPLCMRLLYE-PLTTPCGHTFCRSCLARALDHASYCPIC 53
>gi|260835550|ref|XP_002612771.1| hypothetical protein BRAFLDRAFT_97248 [Branchiostoma floridae]
gi|229298151|gb|EEN68780.1| hypothetical protein BRAFLDRAFT_97248 [Branchiostoma floridae]
Length = 1215
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A+L +G C +GD A+ Y S+E + K + ++ SLN IG+
Sbjct: 1012 IAALLNNIGKCWGDLGDNRKAIRYHEQSLE-MTKAIYGETTAHPGIAASLNNIGNRWSDL 1070
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY +SL +R+ + P D+A SL + +G++ A+ ++
Sbjct: 1071 GDKRKAISYYEQSLKMRKAIYGETTAHP----DIAGSLNNIGACWSDLGDKRKAIRYHEQ 1126
Query: 350 AIKRLESL----TLKPEEAG 365
++K ++++ T P+ AG
Sbjct: 1127 SLKMMKAIYGETTAHPDIAG 1146
>gi|380017069|ref|XP_003692488.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Apis florea]
Length = 543
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 25 NKYPAECPFSKARPDDAASRKAVENSAKPQA-----EHDGDKAKSDSMDSASI--PPKCP 77
N E F++ S A +N+ K QA D +K K SA I PP
Sbjct: 145 NSSGGEEEFTQTVSRRLLSTTAPQNNVKLQAGLDRLYQDIEKLKRLETRSAEILLPP--- 201
Query: 78 FGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
G L C++C LL++ TPC H YC C+ R D CPLC +
Sbjct: 202 ----LSGGTAGELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADY 256
Query: 134 EADTTLQDVVDRFIE 148
A + Q V FIE
Sbjct: 257 LASS--QKTVTDFIE 269
>gi|328777335|ref|XP_393893.4| PREDICTED: hypothetical protein LOC410413 [Apis mellifera]
Length = 1024
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK----IEADTTLQD 141
L C +C+ L + + C H +C++CI + + CP C + K I+AD LQD
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLNTEAHCPSCKHVLNKAKPNIKADKALQD 76
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 77 IVYKLVPG 84
>gi|198426369|ref|XP_002131159.1| PREDICTED: similar to ring finger protein isoform 2 [Ciona
intestinalis]
Length = 226
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 17/88 (19%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD----CPLCGADI------EKIEADTT 138
++C +C L + + T C H +CK+CI S +D CP C A I + + D T
Sbjct: 14 ITCYLCHGYLIDATTITECLHTFCKSCIVSHVEDGRNECPKCEAVIHHSYPLQYLAYDRT 73
Query: 139 LQDVVDRFI------EGHARIKRSHTNS 160
+QD+V++ + E RI+ H N+
Sbjct: 74 MQDIVEKLVPKLKQSEWSRRIQFCHKNN 101
>gi|449530319|ref|XP_004172143.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 430
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS------RFKDCPLCGAD-----IEKIEADTT 138
++C +C LL E + + C H +C+ CIS ++CP+C D +EK+ D
Sbjct: 17 ITCPLCNKLLKEATTISECLHTFCRKCISDKISDEEIENCPVCNIDLGCAPLEKLRPDHN 76
Query: 139 LQDVVDRFIEGHAR 152
L+D+ + R
Sbjct: 77 LEDLRAKIFPSKRR 90
>gi|449455272|ref|XP_004145377.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449474218|ref|XP_004154108.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 430
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS------RFKDCPLCGAD-----IEKIEADTT 138
++C +C LL E + + C H +C+ CIS ++CP+C D +EK+ D
Sbjct: 17 ITCPLCNKLLKEATTISECLHTFCRKCISDKISDEEIENCPVCNIDLGCAPLEKLRPDHN 76
Query: 139 LQDVVDRFIEGHAR 152
L+D+ + R
Sbjct: 77 LEDLRAKIFPSKRR 90
>gi|380027905|ref|XP_003697655.1| PREDICTED: uncharacterized protein LOC100865279 [Apis florea]
Length = 1303
Score = 44.7 bits (104), Expect = 0.087, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C + + C H +C++CI ++ K CP+C + K I D TL
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYLENNKYCPICEVQVHKSKPLLNIRPDYTL 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|297667281|ref|XP_002811904.1| PREDICTED: polycomb group RING finger protein 1 [Pongo abelii]
gi|332239108|ref|XP_003268747.1| PREDICTED: polycomb group RING finger protein 1 [Nomascus
leucogenys]
gi|402891319|ref|XP_003908897.1| PREDICTED: polycomb group RING finger protein 1 [Papio anubis]
gi|355565816|gb|EHH22245.1| hypothetical protein EGK_05474 [Macaca mulatta]
gi|355751439|gb|EHH55694.1| hypothetical protein EGM_04947, partial [Macaca fascicularis]
gi|380783643|gb|AFE63697.1| polycomb group RING finger protein 1 [Macaca mulatta]
gi|383411057|gb|AFH28742.1| polycomb group RING finger protein 1 [Macaca mulatta]
gi|384942650|gb|AFI34930.1| polycomb group RING finger protein 1 [Macaca mulatta]
Length = 259
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|223590125|sp|Q8R023.2|PCGF1_MOUSE RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1; AltName:
Full=RING finger protein 68
gi|148666640|gb|EDK99056.1| mCG133598, isoform CRA_a [Mus musculus]
gi|149036498|gb|EDL91116.1| rCG56268, isoform CRA_a [Rattus norvegicus]
Length = 259
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|340059445|emb|CCC53829.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 538
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEADTTLQDVVD 144
L+C +C+ L +PC H +C ACIS++ C C A I ++ LQ+ VD
Sbjct: 193 LTCSVCKCLYVRPCTLSPCMHAFCAACISKWLANGNNKCVECRATIHEVRPTHKLQNCVD 252
Query: 145 RFIEGHARIKR 155
+ I + R
Sbjct: 253 QLIRLRPNLAR 263
>gi|109240538|ref|NP_116062.2| polycomb group RING finger protein 1 [Homo sapiens]
gi|114578279|ref|XP_515562.2| PREDICTED: polycomb group RING finger protein 1 [Pan troglodytes]
gi|397478066|ref|XP_003810379.1| PREDICTED: polycomb group RING finger protein 1 [Pan paniscus]
gi|426336056|ref|XP_004029520.1| PREDICTED: polycomb group RING finger protein 1 [Gorilla gorilla
gorilla]
gi|223590124|sp|Q9BSM1.2|PCGF1_HUMAN RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1; AltName:
Full=RING finger protein 68
gi|119620038|gb|EAW99632.1| polycomb group ring finger 1, isoform CRA_a [Homo sapiens]
gi|410217414|gb|JAA05926.1| polycomb group ring finger 1 [Pan troglodytes]
gi|410254064|gb|JAA14999.1| polycomb group ring finger 1 [Pan troglodytes]
gi|410290162|gb|JAA23681.1| polycomb group ring finger 1 [Pan troglodytes]
Length = 259
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|328863460|gb|EGG12559.1| hypothetical protein MELLADRAFT_76217 [Melampsora larici-populina
98AG31]
Length = 456
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI--EKIEADTTLQDVV 143
L C +C +L+FE T C H +CK C+ R D CP+C + + + D T+Q+++
Sbjct: 137 LECSLC-SLIFELPSTTRCGHTFCKGCLERSLDYTNRCPVCRQSLIRQTLSIDQTIQELI 195
Query: 144 DRFIEGHARIKRSHTNSDKEE 164
+ + RS S+ +E
Sbjct: 196 MKCFSTRFQTTRSSNPSESQE 216
>gi|296236258|ref|XP_002763253.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Callithrix jacchus]
Length = 759
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 8 AKARPDDASPRKPGE---NSNKYPAECPFSKARPDDAASRKAVENSA-----------KP 53
A AR D +S R P + + ++P + +K DAAS +A ++ +
Sbjct: 367 AAARGDGSSQRNPAKVKGDGQQHPMKDQEAKEGKQDAASPEAASSTTGKCQGKKRKYYQL 426
Query: 54 QAEHD-GDKAKSDSMDSASIPPKCP-FGYDAQSFKIGPLSCMICQALLFECSKCTPCSHV 111
A+HD G K D + P SF L C +C L +E TPC H
Sbjct: 427 DAQHDTGMSNKGFKQDPPTDQEATPALSLPLASFDASDLECALCMRLFYE-PVTTPCGHT 485
Query: 112 YCKACISRFKD----CPLCGADI------EKIEADTTLQDVVDRFIEGHARIKRSHTNSD 161
+C C+ R D CPLC + K + +++++ +F+ + +R +
Sbjct: 486 FCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIMEELIAKFLPEELKERRKLYEEE 545
Query: 162 KEE 164
EE
Sbjct: 546 MEE 548
>gi|407406868|gb|EKF30959.1| hypothetical protein MOQ_005211 [Trypanosoma cruzi marinkellei]
Length = 531
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEADTTLQDVVD 144
L+C +C+ L PC HV C ACIS++ K+C C A I ++ +Q V+
Sbjct: 187 LTCPVCRGLFIRPCSAIPCLHVCCAACISQWLGTGHKNCVQCRAKIWEVRPSHKIQSCVE 246
Query: 145 RFIEGHARIKRS 156
++ + ++ RS
Sbjct: 247 ELLKRNPQLARS 258
>gi|291386486|ref|XP_002709762.1| PREDICTED: polycomb group ring finger 1 [Oryctolagus cuniculus]
gi|351698792|gb|EHB01711.1| Polycomb group RING finger protein 1 [Heterocephalus glaber]
Length = 259
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|149727250|ref|XP_001500243.1| PREDICTED: polycomb group RING finger protein 1 [Equus caballus]
Length = 259
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|357115329|ref|XP_003559442.1| PREDICTED: E3 ubiquitin protein ligase DRIP1-like [Brachypodium
distachyon]
Length = 449
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCG-----ADIEKIEAD 136
GPL+C +C+ LL + T C H +C+ CI + + CP+C A EK+ D
Sbjct: 17 GPLTCPLCRGLLRDAHAFTECVHTFCRECIMKKIDDEEIESCPVCNIYLGIAPEEKLRPD 76
Query: 137 TTLQDVVDRFI 147
+Q + R
Sbjct: 77 NNIQALRKRLF 87
>gi|296223494|ref|XP_002757636.1| PREDICTED: polycomb group RING finger protein 1 [Callithrix
jacchus]
gi|403260331|ref|XP_003922629.1| PREDICTED: polycomb group RING finger protein 1 [Saimiri
boliviensis boliviensis]
Length = 259
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|73980955|ref|XP_532995.2| PREDICTED: polycomb group RING finger protein 1 [Canis lupus
familiaris]
gi|301772196|ref|XP_002921515.1| PREDICTED: polycomb group RING finger protein 1-like [Ailuropoda
melanoleuca]
gi|410955103|ref|XP_003984198.1| PREDICTED: polycomb group RING finger protein 1 [Felis catus]
gi|281343057|gb|EFB18641.1| hypothetical protein PANDA_010410 [Ailuropoda melanoleuca]
Length = 259
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|157128545|ref|XP_001661478.1| posterior sex combs protein [Aedes aegypti]
gi|108872543|gb|EAT36768.1| AAEL011178-PA [Aedes aegypti]
Length = 1348
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK----IEADTTLQD 141
++C +C+ L + + C H +C +CI + + CP C I K I+ D TLQ
Sbjct: 50 ITCNLCKGYLIDATTIVECLHSFCHSCIMKHLRTEQYCPQCEMMINKAKPNIKPDATLQS 109
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 110 IVYKLVPG 117
>gi|260789653|ref|XP_002589860.1| hypothetical protein BRAFLDRAFT_100698 [Branchiostoma floridae]
gi|229275044|gb|EEN45871.1| hypothetical protein BRAFLDRAFT_100698 [Branchiostoma floridae]
Length = 1353
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ + LG LG R +GD+ AV+Y S++ MK + + H +++S+N +G
Sbjct: 879 IASSLGNLGIAWRDLGDSRKAVSYHEQSLQ--MKRSIYGKDTAHLDIALSINNLGATWMS 936
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
G+ + A SY+ +SL + R + + P ++A SL +A ++G+ AV F+
Sbjct: 937 LGEYKKAVSYHEQSLRMIRSIYGKDTAHP----NIASSLNNLATAWGNLGDPRKAVVYFE 992
Query: 349 EAIKRLESL 357
++++ + S+
Sbjct: 993 QSLQMMWSI 1001
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG R +GD + AV+Y S+ M+ + + H ++ SLN +G
Sbjct: 1055 IASSLNNLGTALRNLGDLEKAVSYHEQSLR--MRWSIYGKDTAHPDIASSLNNLGTALRN 1112
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GDL+ A SY+ +SL +R + + P D+A SL + ++G+ AV +
Sbjct: 1113 LGDLEKAVSYHEQSLRMRWSIYGKDTAHP----DIASSLNNLGLAWGNLGDPKKAVSYHE 1168
Query: 349 EAIKRLESL 357
+A++ S+
Sbjct: 1169 QALRMWRSI 1177
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L L +GD AV YF S++ + + D H ++ SLN +G
Sbjct: 967 IASSLNNLATAWGNLGDPRKAVVYFEQSLQMMWSIYGKD--TAHPDITCSLNNLGTAWVN 1024
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ +SL + R + + P D+A SL + R++G+ + AV +
Sbjct: 1025 LGDYKKAVSYHEQSLRMMRSIYGKDTAHP----DIASSLNNLGTALRNLGDLEKAVSYHE 1080
Query: 349 EAIKRLESL 357
++++ S+
Sbjct: 1081 QSLRMRWSI 1089
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD AV+Y S+ + + D H ++ SLN +G GDL
Sbjct: 1015 LNNLGTAWVNLGDYKKAVSYHEQSLRMMRSIYGKD--TAHPDIASSLNNLGTALRNLGDL 1072
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SY+ +SL +R + + P D+A SL + R++G+ + AV +++++
Sbjct: 1073 EKAVSYHEQSLRMRWSIYGKDTAHP----DIASSLNNLGTALRNLGDLEKAVSYHEQSLR 1128
Query: 353 RLESL 357
S+
Sbjct: 1129 MRWSI 1133
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG CR +GD AV+Y S+ LM + + H +++SLN +G +
Sbjct: 1231 IASSLNNLGAACRDLGDYKKAVSYHEQSL--LMVRSIYGKDTAHPDIALSLNNLGAAWWN 1288
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A Y+ +SL + R ++ P + SL + V +++G++ A F
Sbjct: 1289 LGDYRKAVVYFEQSLQMMRRVCDENTAHPY----IIASLKNLGVVWKNLGDDQRADIYFA 1344
Query: 349 EAIKRLESL 357
E +++LE +
Sbjct: 1345 E-VEKLEKI 1352
>gi|348566463|ref|XP_003469021.1| PREDICTED: polycomb group RING finger protein 1-like [Cavia
porcellus]
Length = 259
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|260827539|ref|XP_002608722.1| hypothetical protein BRAFLDRAFT_73943 [Branchiostoma floridae]
gi|229294074|gb|EEN64732.1| hypothetical protein BRAFLDRAFT_73943 [Branchiostoma floridae]
Length = 620
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD A+ Y+ S++ MK + I H +++SLN +GD GD
Sbjct: 342 LNNLGAAWSNLGDHRKAINYYEQSLQ--MKRRIYGEGIAHPDIAISLNNLGDSWSDLGDH 399
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A +YY +SL ++R P D+A+SL + D +G A+ ++A++
Sbjct: 400 RKAINYYEQSLQMKRRIYGEGIAHP----DIAISLNNLGDSWSELGEHRKAISYHEQALQ 455
Query: 353 RLESL 357
S+
Sbjct: 456 MRRSI 460
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
L D C + + AV+Y++ S++ + ++SLN +G GD + A
Sbjct: 310 LADACGNLAECKTAVSYYSQSLQMRRSI----------YAISLNNLGAAWSNLGDHRKAI 359
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+YY +SL ++R P D+A+SL + D +G+ A++ ++++++
Sbjct: 360 NYYEQSLQMKRRIYGEGIAHP----DIAISLNNLGDSWSDLGDHRKAINYYEQSLQ 411
>gi|395841172|ref|XP_003793420.1| PREDICTED: polycomb group RING finger protein 1 [Otolemur
garnettii]
Length = 259
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|328793199|ref|XP_397419.4| PREDICTED: hypothetical protein LOC413984 [Apis mellifera]
Length = 1395
Score = 44.3 bits (103), Expect = 0.096, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C + + C H +C++CI ++ K CP+C + K I D TL
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYLENNKYCPICEVQVHKSKPLLNIRPDHTL 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|241707385|ref|XP_002413296.1| DNA-binding protein mel-18, putative [Ixodes scapularis]
gi|215507110|gb|EEC16604.1| DNA-binding protein mel-18, putative [Ixodes scapularis]
Length = 1230
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEA------DTTL 139
LSC +C+ L + C H +CK+CI + CP+C + KI D L
Sbjct: 44 LSCPLCRGYLVDAVTLVKCLHSFCKSCILKHLETGSSCPVCELRLSKINMEVQLRRDEIL 103
Query: 140 QDVVDRFIEGHARIKRSH-TNSDKEEDEAGENKKVIY---EDVSMERGAFLVQQAMRAFR 195
Q++V + I G + +R+ T +K E + + +VI+ E VS+ +
Sbjct: 104 QNIVYKAIPGLYQNERATLTPEEKGELDNSSSGRVIFSPDEAVSL-------SLEYKHIV 156
Query: 196 AQNVESAKSRLSLCTEDIRDQIERMGN 222
+ VE S C ++ ++R N
Sbjct: 157 SSRVEGGDSTPGTCNPAFKEPVKRYLN 183
>gi|426223979|ref|XP_004006151.1| PREDICTED: polycomb group RING finger protein 1 [Ovis aries]
gi|440896445|gb|ELR48364.1| Polycomb group RING finger protein 1 [Bos grunniens mutus]
Length = 259
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|363746044|ref|XP_003643507.1| PREDICTED: polycomb group RING finger protein 1-like, partial
[Gallus gallus]
Length = 249
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 34 IVCCLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPMCNTKIHETQPLLNLKLDRVM 93
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 94 QDIVYKLVPG 103
>gi|431920375|gb|ELK18407.1| Polycomb group RING finger protein 1 [Pteropus alecto]
Length = 272
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 58 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 117
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 118 QDIVYKLVPG 127
>gi|53370662|gb|AAU89157.1| Zinc finger, C3HC4 type (RING finger) containing protein [Oryza
sativa Japonica Group]
Length = 537
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGAD-----IEKIEADTT 138
++C +C LL + + + C H +C+ CI + CP+C D +EK+ AD
Sbjct: 108 MTCPLCGRLLRDATTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGCTPVEKLRADHN 167
Query: 139 LQDVVDRFI 147
LQDV +
Sbjct: 168 LQDVRSKIF 176
>gi|13474327|ref|NP_105895.1| hypothetical protein mll5190 [Mesorhizobium loti MAFF303099]
gi|14025079|dbj|BAB51681.1| mll5190 [Mesorhizobium loti MAFF303099]
Length = 858
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L + GD ++ ++ + + L L D+ + L+++ +KIG++ GD+
Sbjct: 473 LANIKMVQGDLPTSLEHYEAARDMLQDLTASVPDEKSWLGDLAMANDKIGNVLATQGDVG 532
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
AA Y +SL+++R V N S + D+ ++ ++ D+ R+ G D A F+E+++
Sbjct: 533 AAAKAYQQSLSIKRKLVDAQPNSASLLRDLTITYDEIGDLARTAGQLDGAQTAFEESLR 591
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 222 NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMD--DLEIIHTLSVSL 279
N++ L L +GD R G D A F +S+ + L + D E +SVS
Sbjct: 554 NSASLLRDLTITYDEIGDLARTAGQLDGAQTAFEESLRIRLVLAENKPDPERQRAVSVSH 613
Query: 280 NKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGN 339
+IGD+ GD A Y +S + + V+ N D+++S AK+ + N
Sbjct: 614 ERIGDVLRERGDAAGALVAYSKSQAIAEELVRHDPNDTDLKRDLSISYAKIGNALNDQEN 673
Query: 340 EDVAVDGFQEAI 351
A+ +Q+A+
Sbjct: 674 WPAALASYQQAL 685
>gi|260801347|ref|XP_002595557.1| hypothetical protein BRAFLDRAFT_64626 [Branchiostoma floridae]
gi|229280804|gb|EEN51569.1| hypothetical protein BRAFLDRAFT_64626 [Branchiostoma floridae]
Length = 2997
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
LG+ CR +GD A++Y S++ M+ + + +H ++ SLN +G GD + A
Sbjct: 1023 LGNACRNLGDHRKAISYHEQSLQ--MRRSIYGEDTVHPDIAESLNNLGVAWSRLGDRRKA 1080
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+YY SL + R + P D+A+SL + R++G A+ ++++++
Sbjct: 1081 IAYYEHSLQMTRRLYGEGTAHP----DIAISLTCLGLAYRNLGEHKKAIIYYEQSLR 1133
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG+ +GD A++Y+ S++ + + +D H ++ SLN +G+ G
Sbjct: 2541 LHNLGNAWVNLGDDKKAISYYKQSLQMMRSIYGED--TAHPDIAASLNNLGNAWRNLGAY 2598
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAV 344
A SYY +SL +RR + P ++A+SL + S+G + AV
Sbjct: 2599 GKAVSYYEQSLQMRRSIYGEDTAHP----NIAISLNNLGIAWSSLGGQRKAV 2646
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L L A+GD + AV Y+ S++ + + H ++ SLN +G+ + GD
Sbjct: 888 LDKLAFASWALGDYEKAVRYYEKSLQITWSIYGEG--TAHPNIATSLNNLGNAWSHLGDC 945
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SY+ +SL +RR + + P D+A SL + + +G+ A+ ++++++
Sbjct: 946 RKAVSYHEQSLQMRRSIYGKDTAHP----DIAESLNNLGNAWCYLGDNRKAIVYYEQSLQ 1001
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 228 SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLK 286
S + +L LG +GD AV YF S++ + DD H ++ SLN +G
Sbjct: 1146 SYIAILLNNLGMTWSDLGDHKKAVCYFEQSLQMNRSIFGDD--SAHPDITSSLNNLGGAW 1203
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
GD + SYY ++L + R P D+A+SL + ++ + AV
Sbjct: 1204 QILGDHGKSISYYDQALQMMRSIYGEDKKHP----DIAISLTNLGNLWNDLRYHRKAVSY 1259
Query: 347 FQEAIKRLESL 357
++A++ +S+
Sbjct: 1260 HEQALQMQQSI 1270
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 21/141 (14%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG+ +GD AV+Y S++ M+ + + H ++ SLN +G+ Y GD
Sbjct: 932 LNNLGNAWSHLGDCRKAVSYHEQSLQ--MRRSIYGKDTAHPDIAESLNNLGNAWCYLGDN 989
Query: 293 QAARSYYVRSLNVR-----RDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
+ A YY +SL ++ D R D+A+S + + R++G+ A+
Sbjct: 990 RKAIVYYEQSLQIKLSIYGEDTAHR---------DIALSFYNLGNACRNLGDHRKAISYH 1040
Query: 348 QEAIKRLESL----TLKPEEA 364
+++++ S+ T+ P+ A
Sbjct: 1041 EQSLQMRRSIYGEDTVHPDIA 1061
>gi|126332008|ref|XP_001365616.1| PREDICTED: polycomb group RING finger protein 1-like [Monodelphis
domestica]
Length = 259
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|156372730|ref|XP_001629189.1| predicted protein [Nematostella vectensis]
gi|156216183|gb|EDO37126.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C E + T C H +CK+CI ++ K CP C I + ++ D T+
Sbjct: 12 IVCSLCAGYFVEATTVTECLHTFCKSCIVKYLQSSKCCPTCNLQIHETQPLLNLQLDRTM 71
Query: 140 QDVVDRFIEG 149
QDVV + + G
Sbjct: 72 QDVVHKVVPG 81
>gi|449283268|gb|EMC89948.1| Polycomb group RING finger protein 1, partial [Columba livia]
Length = 230
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 15 IVCCLCAGYFIDATTITECLHTFCKSCIVKYLQTSKYCPMCNTKIHETQPLLNLKLDRVM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|391336808|ref|XP_003742770.1| PREDICTED: polycomb group RING finger protein 3-like [Metaseiulus
occidentalis]
Length = 250
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + + D T+
Sbjct: 14 ITCRICKGYLIDATTVTECLHTFCKSCLVKHLEEKNTCPQCETLIHQSHPLNYVAYDRTM 73
Query: 140 QDVVDRFI 147
QDVV R +
Sbjct: 74 QDVVYRLV 81
>gi|290987890|ref|XP_002676655.1| predicted protein [Naegleria gruberi]
gi|284090258|gb|EFC43911.1| predicted protein [Naegleria gruberi]
Length = 543
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 13/74 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-------------KDCPLCGADIEKIEAD 136
L+C IC + + PC H +C +C+S + +CP C A I+++ +
Sbjct: 190 LTCPICSGIFYRPVSVIPCLHNFCSSCLSSWLNPSNNNSYFGQNMNCPTCRATIQEVRKN 249
Query: 137 TTLQDVVDRFIEGH 150
TL ++ + +++ H
Sbjct: 250 PTLNNLTETYLKTH 263
>gi|37574111|ref|NP_932109.1| polycomb group RING finger protein 1 [Mus musculus]
gi|20307063|gb|AAH28560.1| Polycomb group ring finger 1 [Mus musculus]
Length = 247
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|380012175|ref|XP_003690162.1| PREDICTED: uncharacterized protein LOC100863555 [Apis florea]
Length = 1019
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK----IEADTTLQD 141
L C +C+ L + + C H +C++CI + + CP C + K I+AD LQD
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLNTEAHCPSCKHVLNKAKPNIKADKALQD 76
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 77 IVYKLVPG 84
>gi|354498153|ref|XP_003511180.1| PREDICTED: polycomb group RING finger protein 1-like [Cricetulus
griseus]
Length = 247
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|326508722|dbj|BAJ95883.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGAD-----IEKIEADTT 138
++C +C LL E + + C H +C+ CI + CP+C D +EK+ AD
Sbjct: 85 MTCKLCHRLLREATTISECLHTFCRKCIYKKLNDEELDHCPVCKIDLGCAPVEKLRADHN 144
Query: 139 LQDVVDRFI 147
QDV +
Sbjct: 145 KQDVRSKIF 153
>gi|13436326|gb|AAH04952.1| PCGF1 protein [Homo sapiens]
gi|312150760|gb|ADQ31892.1| polycomb group ring finger 1 [synthetic construct]
Length = 247
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|326520948|dbj|BAJ92837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGAD-----IEKIEADTT 138
++C +C LL E + + C H +C+ CI + CP+C D +EK+ AD
Sbjct: 85 MTCKLCHRLLREATTISECLHTFCRKCIYKKLNDEELDHCPVCKIDLGCAPVEKLRADHN 144
Query: 139 LQDVVDRFI 147
QDV +
Sbjct: 145 KQDVRSKIF 153
>gi|296482751|tpg|DAA24866.1| TPA: polycomb group RING finger protein 1 [Bos taurus]
Length = 247
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|260828580|ref|XP_002609241.1| hypothetical protein BRAFLDRAFT_90695 [Branchiostoma floridae]
gi|229294596|gb|EEN65251.1| hypothetical protein BRAFLDRAFT_90695 [Branchiostoma floridae]
Length = 1067
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 243 AMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRS 302
+GD AV+Y S+ +M+ ++ + ++ SLN +G+ GD + A SY+ +S
Sbjct: 706 GLGDHKTAVSYHEKSLR-MMRSIYGEVTVHPAIATSLNNLGEAWRVLGDHRKAVSYHEQS 764
Query: 303 LNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
L +RR + P D+A SL + + R +G+ AV ++++++ S+
Sbjct: 765 LQMRRSIYGVDTAHP----DIAGSLNNLGSIWRDLGDHRKAVSYYEQSLQMRRSI 815
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD AV+Y+ ++++ M+ + + H ++ SLN +G Y GD
Sbjct: 829 LSNLGAAWLDLGDHRKAVSYYEEALQ--MRWSIYGEDTAHPDIATSLNNLGGAWSYLGDH 886
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ YY +S+ + R + P D+A SL + ++G+ AV F++A++
Sbjct: 887 RKELGYYEQSIQMERSIYGEGTAHP----DIARSLNNLGAAWSNLGDHRKAVSYFEQALQ 942
Query: 353 RLESL 357
S+
Sbjct: 943 MRRSI 947
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD AV+YF +++ M+ + ++I H ++ SLN +G G+
Sbjct: 917 LNNLGAAWSNLGDHRKAVSYFEQALQ--MRRSICGVDIEHPDIAASLNNLGATWGDLGNH 974
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL +RR + P D+A SL + ++G+ AV F+++++
Sbjct: 975 RKAVSYYEQSLQMRRSIYGEGTVHP----DIADSLNNLGAAWSNLGDHRKAVSYFEQSLQ 1030
Query: 353 RLESL 357
S+
Sbjct: 1031 MSRSI 1035
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYYGGDL 292
L LG+ CR +GD A +Y+ +++ + + DD H+ + V+L +G++ GD
Sbjct: 609 LNNLGNACRNLGDHKKATSYYQQALQMMRAIYGDD--TAHSDIVVTLRNLGNVWVDLGDH 666
Query: 293 QAARSYYVRSLNV 305
+ A SYY +SL +
Sbjct: 667 RKAESYYEQSLQM 679
>gi|55741429|ref|NP_001007001.1| polycomb group RING finger protein 1 [Rattus norvegicus]
gi|81891476|sp|Q6DLV9.1|PCGF1_RAT RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1
gi|50345835|gb|AAT74859.1| Nspc1-like protein [Rattus norvegicus]
Length = 243
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|260815996|ref|XP_002602758.1| hypothetical protein BRAFLDRAFT_93704 [Branchiostoma floridae]
gi|229288070|gb|EEN58770.1| hypothetical protein BRAFLDRAFT_93704 [Branchiostoma floridae]
Length = 1566
Score = 44.3 bits (103), Expect = 0.11, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L +G R +GD AV+Y+ S++ MKL + + H ++ SLN +G
Sbjct: 917 IAGSLNNMGSAWRNLGDHRKAVSYYEQSLQ--MKLSIYGEDTAHPNIADSLNNLGATWSN 974
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL ++R + P D+A SL + R++G+ ++ +
Sbjct: 975 LGDNRKAISYYEQSLQMKRSIYGDDTAHP----DIANSLNNLGATWRNLGDNRKSISYHE 1030
Query: 349 EAIKRLESL 357
++++ + S+
Sbjct: 1031 QSLQMMLSI 1039
Score = 42.0 bits (97), Expect = 0.47, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG+ +GD A++Y+ S++ MK + + H ++ SLN +G+
Sbjct: 1093 IAGSLNNLGNAWGDLGDHRKAISYYEQSLQ--MKWSIYGEDTAHPDITSSLNNLGNAWSN 1150
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL + R + P D+A SL + R++G+ A+ ++
Sbjct: 1151 LGDHRKAISYYEQSLQMMRSIYGEGTAHP----DIAGSLNNLGATWRNLGDHRKAISYYE 1206
Query: 349 EAIKRLESL 357
++++ S+
Sbjct: 1207 QSLQMKRSI 1215
Score = 41.2 bits (95), Expect = 0.93, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L LG R +GD A++Y+ S++ MK + + H ++ SLN +G
Sbjct: 1181 IAGSLNNLGATWRNLGDHRKAISYYEQSLQ--MKRSIYGEDTAHPDIADSLNNLGTAWRN 1238
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL++ R + P D+A SL + ++G+ A+ ++
Sbjct: 1239 LGDHRKAISYYEQSLHMMRSIYGEDTAHP----DIASSLNNLGGAWTNLGDHRKAISYYE 1294
Query: 349 EAIKRLESL 357
A++ + +
Sbjct: 1295 HALQMMRGI 1303
Score = 38.9 bits (89), Expect = 4.6, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L LG +GD A++Y+ +++ + + +D ++ SLN +G+
Sbjct: 1049 IASTLNNLGGAWTNLGDHRKAISYYEHALQMMRGIYGED-NAHPNIAGSLNNLGNAWGDL 1107
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY +SL ++ + P D+ SL + + ++G+ A+ +++
Sbjct: 1108 GDHRKAISYYEQSLQMKWSIYGEDTAHP----DITSSLNNLGNAWSNLGDHRKAISYYEQ 1163
Query: 350 AIKRLESL----TLKPEEAG 365
+++ + S+ T P+ AG
Sbjct: 1164 SLQMMRSIYGEGTAHPDIAG 1183
>gi|85715289|ref|ZP_01046272.1| TPR repeat protein [Nitrobacter sp. Nb-311A]
gi|85697935|gb|EAQ35809.1| TPR repeat protein [Nitrobacter sp. Nb-311A]
Length = 1080
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 201 SAKSRLSLCTEDIRDQ---IERMGNTS----ELCSQLGAVLGMLGDCCRAMGDADAAVAY 253
+A+ +L E IR Q +ER+ N + +L S+L +G+ A G+ A+
Sbjct: 599 AAQGKLDEALESIRKQLAIVERLANGAPGDADLQSELSLCYEKIGEGLMAQGNLPEALGA 658
Query: 254 FADSVEFLMKLP----MDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDA 309
F +E +L DD + +++ +++GD+ G L + ++ L ++
Sbjct: 659 FQSQLEITERLARGADTDDNKWQRDRTLAYDRVGDVLLAQGKLPESLEFFRNGLTIKERV 718
Query: 310 VKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLT-LKPEEAGLEQ 368
K H + S +++S ++ DV + G A+ F+ ++ + L +PE G Q
Sbjct: 719 AKAHPDNTSWQRSLSISHDRIGDVLVAQGKLADALKSFRTGLEIAQQLVRTEPENVGW-Q 777
Query: 369 RRLSV 373
R LSV
Sbjct: 778 RDLSV 782
>gi|432108051|gb|ELK33032.1| Polycomb group RING finger protein 1 [Myotis davidii]
Length = 266
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|296236256|ref|XP_002763252.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Callithrix jacchus]
Length = 718
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 8 AKARPDDASPRKPGE---NSNKYPAECPFSKARPDDAASRKAVENSA-----------KP 53
A AR D +S R P + + ++P + +K DAAS +A ++ +
Sbjct: 326 AAARGDGSSQRNPAKVKGDGQQHPMKDQEAKEGKQDAASPEAASSTTGKCQGKKRKYYQL 385
Query: 54 QAEHD-GDKAKSDSMDSASIPPKCP-FGYDAQSFKIGPLSCMICQALLFECSKCTPCSHV 111
A+HD G K D + P SF L C +C L +E TPC H
Sbjct: 386 DAQHDTGMSNKGFKQDPPTDQEATPALSLPLASFDASDLECALCMRLFYE-PVTTPCGHT 444
Query: 112 YCKACISRFKD----CPLCGADI------EKIEADTTLQDVVDRFIEGHARIKRSHTNSD 161
+C C+ R D CPLC + K + +++++ +F+ + +R +
Sbjct: 445 FCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIMEELIAKFLPEELKERRKLYEEE 504
Query: 162 KEE 164
EE
Sbjct: 505 MEE 507
>gi|30268278|emb|CAD89939.1| hypothetical protein [Homo sapiens]
Length = 615
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 455 CAVCLDVYFNPYMCYPCHHIFCEPCLGTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 514
Query: 145 RFI-EGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGA 184
F + + +IK+S S+ + +K + R A
Sbjct: 515 TFFTKEYLKIKQSFQKSNSAKWPLPSCRKAFHLFAGFRRHA 555
>gi|260826315|ref|XP_002608111.1| hypothetical protein BRAFLDRAFT_91411 [Branchiostoma floridae]
gi|229293461|gb|EEN64121.1| hypothetical protein BRAFLDRAFT_91411 [Branchiostoma floridae]
Length = 381
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A+L LG R +GD AV+YF ++ +M+ + + H ++ LN +G
Sbjct: 14 IAALLNNLGLAWRRLGDHRKAVSYFEQAL--MMRRSIYGEDNAHPDIAGLLNNLGGALSC 71
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL +RR + P +AVSL + ++G+ AV ++
Sbjct: 72 LGDNRKAVSYYEQSLQMRRSIYGEDTAHPG----IAVSLNNLGSAWGNLGDHRKAVSYYE 127
Query: 349 EAIKRLESL----TLKPEEAGL 366
++++ S+ T P+ A L
Sbjct: 128 QSLQMSRSIYGEDTAHPDIAAL 149
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +L LG +GD AV+Y+ S++ M+ + + H ++VSLN +G
Sbjct: 58 IAGLLNNLGGALSCLGDNRKAVSYYEQSLQ--MRRSIYGEDTAHPGIAVSLNNLGSAWGN 115
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL + R + P D+A L + +G+ AV ++
Sbjct: 116 LGDHRKAVSYYEQSLQMSRSIYGEDTAHP----DIAALLNNLGAAWGDLGDHRKAVSYYE 171
Query: 349 EAIKRLESL----TLKPEEAGL 366
+A+ S+ P+ AGL
Sbjct: 172 QALMMRRSIYGEDNAHPDIAGL 193
>gi|321476883|gb|EFX87843.1| hypothetical protein DAPPUDRAFT_43185 [Daphnia pulex]
Length = 238
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKAC----ISRFKDCPLCGADI------EKIEADTTL 139
L C +C+ L + + T C H +C++C ++ F CP C + ++ D TL
Sbjct: 21 LICTVCKGYLVDATTITECLHSFCRSCVVPHVAEFHQCPSCSVPLSTTKPFSQLRRDYTL 80
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAGENK 171
Q +V + + AR + ++E AG +K
Sbjct: 81 QSIVYKMVPRLARNELDRRKQFRQERFAGASK 112
>gi|260828552|ref|XP_002609227.1| hypothetical protein BRAFLDRAFT_90681 [Branchiostoma floridae]
gi|229294582|gb|EEN65237.1| hypothetical protein BRAFLDRAFT_90681 [Branchiostoma floridae]
Length = 1469
Score = 43.9 bits (102), Expect = 0.12, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 228 SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLK 286
S + + L LG+ +GD A+ Y+ S++ + + H ++ SLN +
Sbjct: 1329 SSIASSLNNLGNAWSDLGDHRKAIKYYEQSLQMRRSIYRHGEDTAHPHIADSLNNLAVAW 1388
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
GD + A +YY +SL ++R +++ P D+A +L +A R +G+ A+
Sbjct: 1389 SDLGDHKMAINYYEQSLQIKRHIYGKNTAHP----DIAATLNNMAVAYRDLGDHRRAISY 1444
Query: 347 FQEAIKRLESLTLKPEEAG 365
++++++ + S+ E G
Sbjct: 1445 YEQSLQMMRSIHAYGEATG 1463
Score = 43.5 bits (101), Expect = 0.19, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
LG +G +GD A++Y+ +++ MK + IH +++SLN +G GD
Sbjct: 939 LGNMGSAWSNLGDNKKAISYYEKALQ--MKRSIYGEGTIHPDIALSLNNLGKAWSSLGDY 996
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SY +SL ++R + P D+A +L + R +GN A+ +++++K
Sbjct: 997 RKAISYKEQSLKMKRSIYGEDTAHP----DIASTLNNLGTAWRDLGNHRKAIGYYEQSLK 1052
Score = 41.2 bits (95), Expect = 0.87, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 216 QIERMG-NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT 274
Q++R+ + S + ++ L LG+ C +GD A+ Y S++ ++ ++ T
Sbjct: 876 QMKRLNYDDSTVHPEIADSLTNLGNVCSNLGDHRKAIGYLEQSLQMKRRIYGENTA-QPT 934
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVD 334
++ SL +G GD + A SYY ++L ++R + P D+A+SL +
Sbjct: 935 IAFSLGNMGSAWSNLGDNKKAISYYEKALQMKRSIYGEGTIHP----DIALSLNNLGKAW 990
Query: 335 RSIGNEDVAVDGFQEAIKRLESL 357
S+G+ A+ ++++K S+
Sbjct: 991 SSLGDYRKAISYKEQSLKMKRSI 1013
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 233 VLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYYGGD 291
+L +G +GD A++Y+ S++ MK + + +H+ ++ SLN +G+ GD
Sbjct: 1290 LLSNMGKAWSDLGDHRKAISYYEQSLQ--MKKSIYGKDNVHSSIASSLNNLGNAWSDLGD 1347
Query: 292 LQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
+ A YY +SL +RR ++ RH + +A SL +A +G+ +A++ +++++
Sbjct: 1348 HRKAIKYYEQSLQMRR-SIYRHGEDTAHP-HIADSLNNLAVAWSDLGDHKMAINYYEQSL 1405
Query: 352 K 352
+
Sbjct: 1406 Q 1406
>gi|118374643|ref|XP_001020509.1| FHA domain containing protein [Tetrahymena thermophila]
gi|89302276|gb|EAS00264.1| FHA domain containing protein [Tetrahymena thermophila SB210]
Length = 590
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFK----DCPLCGADIEKIEADTTLQDVVDR 145
L C+IC +++ C PC H C AC +K +CP C + + T+ ++++
Sbjct: 233 LECVICMDIIYSCVTLQPCLHNLCGACFYDWKQKSDECPNCRSKYNDFAKNPTINNLIEN 292
Query: 146 FIEGHARIKRS 156
+ H K +
Sbjct: 293 LLNKHPEKKNT 303
>gi|195380027|ref|XP_002048772.1| GJ21231 [Drosophila virilis]
gi|194143569|gb|EDW59965.1| GJ21231 [Drosophila virilis]
Length = 1440
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR--FKD--CPLC----GADI--EKIEADTTL 139
L+C ICQ + E + C H YC++CI + +D CP C G I + + +D TL
Sbjct: 30 LTCRICQGYMIEPTTVDACYHTYCRSCILKHLLRDVYCPQCKSSGGKHISEDNLRSDETL 89
Query: 140 QDVVDRFIEG 149
+ ++ + + G
Sbjct: 90 RALIYKLVPG 99
>gi|168036151|ref|XP_001770571.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678092|gb|EDQ64554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS------RFKDCPLCGAD-----IEKIEADTT 138
L+C +C L+ E + + C H +CKACI+ + CP+C +EK+ AD
Sbjct: 25 LTCPLCNYLIREATTISECLHTFCKACITAELSNGESECCPMCHVGLGTLPLEKLRADHQ 84
Query: 139 LQDVVDRFIEGHARIKR 155
L D+ ++ + + ++
Sbjct: 85 LNDLKEKLFPSNVKKRK 101
>gi|148666641|gb|EDK99057.1| mCG133598, isoform CRA_b [Mus musculus]
Length = 252
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 38 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 97
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 98 QDIVYKLVPG 107
>gi|335310264|ref|XP_003361952.1| PREDICTED: polycomb group RING finger protein 1-like [Sus scrofa]
Length = 262
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 80 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 139
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 140 QDIVYKLVPG 149
>gi|47208291|emb|CAF95067.1| unnamed protein product [Tetraodon nigroviridis]
Length = 224
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C +C+ L + + T C H +CK+CI + DCP CG + E + D TL
Sbjct: 2 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQVHETNPLEMLRLDNTL 61
Query: 140 QDVVDRFIEG 149
++++ + + G
Sbjct: 62 EEIIFKLVPG 71
>gi|260787489|ref|XP_002588785.1| hypothetical protein BRAFLDRAFT_89785 [Branchiostoma floridae]
gi|229273955|gb|EEN44796.1| hypothetical protein BRAFLDRAFT_89785 [Branchiostoma floridae]
Length = 1713
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 211 EDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLE 270
E ++ +I G T+ G+ L LG + +GD A+ YF S+ L ++ D+
Sbjct: 1068 ESLKMKITIYGETTAKGDIAGS-LNNLGSAWQNLGDVKKAIGYFEQSLRMLEEIHGDNTP 1126
Query: 271 IIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKV 330
T + +LN +G G+ A SY+ +SL +++ ++ P D+A SL +
Sbjct: 1127 HPDTAN-TLNNLGTAWDDVGNSIKALSYHEQSLRMKKTLYGHNTPHP----DIASSLNNL 1181
Query: 331 ADVDRSIGNEDVAVDGFQEAIK 352
V +IG++ A+ +++A+K
Sbjct: 1182 GSVWSNIGDKRKAISFYEDALK 1203
>gi|108709971|gb|ABF97766.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|222625413|gb|EEE59545.1| hypothetical protein OsJ_11819 [Oryza sativa Japonica Group]
Length = 510
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGAD-----IEKIEADTT 138
++C +C LL + + + C H +C+ CI + CP+C D +EK+ AD
Sbjct: 108 MTCPLCGRLLRDATTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGCTPVEKLRADHN 167
Query: 139 LQDVVDRFI 147
LQDV +
Sbjct: 168 LQDVRSKIF 176
>gi|42561762|ref|NP_172162.3| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
gi|302595925|sp|Q9M9Y4.2|DRIP1_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP1; AltName:
Full=DREB2A-interacting protein 1
gi|332189912|gb|AEE28033.1| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
Length = 421
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGAD-----IEKIEADTT 138
LSC IC +L + + + C H +C+ CI + CP+C D +EK+ D
Sbjct: 14 LSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGSTPLEKLRPDHN 73
Query: 139 LQDV 142
LQD+
Sbjct: 74 LQDL 77
>gi|327278154|ref|XP_003223827.1| PREDICTED: polycomb group RING finger protein 5-like [Anolis
carolinensis]
Length = 256
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK+CI + DCP CG + E + D TL
Sbjct: 16 ITCCICKGYLIKPTTVTECLHTFCKSCIVQHFEESNDCPRCGNQVHETNPLEMLRLDNTL 75
Query: 140 QDVVDRFI 147
++++ + +
Sbjct: 76 EEIIFKLV 83
>gi|156551978|ref|XP_001602634.1| PREDICTED: hypothetical protein LOC100118736 [Nasonia vitripennis]
Length = 1304
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLCGADIE----KIEADTTLQD 141
L C +C+ L + + C H +C++CI ++ CP C + I+AD LQD
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLNKNAQCPTCKHLLNTAKPNIKADKALQD 76
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 77 IVYKLVPG 84
>gi|383854416|ref|XP_003702717.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Megachile rotundata]
Length = 244
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKI-EADTTLQDVVDRFIE 148
+C C+ L + T C H+YCK C+ K+C +CG I + E + +Q +V+++
Sbjct: 97 FACPFCEGTLCQ-PVTTNCGHIYCKNCVEPGKNCRVCGQKIGSVGETNVLVQRLVEKWWP 155
Query: 149 GHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSL 208
A R+ D E + ++ER V + F ++N+ R
Sbjct: 156 REAEASRARHEGDILMKEG-------HLAQALERYNLAVHLGLTQFSSENMGHPVHRGPC 208
Query: 209 CTED 212
ED
Sbjct: 209 LVED 212
>gi|452000272|gb|EMD92733.1| hypothetical protein COCHEDRAFT_1202687 [Cochliobolus
heterostrophus C5]
Length = 917
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-------------KDCPLCGADIEKIEAD 136
L+C IC LL++ C H +C AC+ + CP C A + + +
Sbjct: 18 LTCSICTDLLYQPLTLLDCLHTFCGACLKEWFAFQASTATSIHPYTCPSCRASVRTTQPN 77
Query: 137 TTLQDVVDRFIEGHARIKRSHTNSDKEED 165
T+ ++D FI+ A +R T+ +K+ D
Sbjct: 78 ATVTTLLDIFIK--ANPERGKTDEEKQAD 104
>gi|380795629|gb|AFE69690.1| E3 ubiquitin-protein ligase RNF180 isoform 1, partial [Macaca
mulatta]
Length = 465
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 305 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 364
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 365 TFFTKEYLKIKQSFQKSN 382
>gi|346716206|ref|NP_001039912.2| polycomb group RING finger protein 1 [Bos taurus]
gi|223590123|sp|Q2YDF9.2|PCGF1_BOVIN RecName: Full=Polycomb group RING finger protein 1
Length = 259
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIE------ADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + + D +
Sbjct: 45 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNHKLDRVM 104
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 105 QDIVYKLVPG 114
>gi|260816956|ref|XP_002603353.1| hypothetical protein BRAFLDRAFT_80346 [Branchiostoma floridae]
gi|229288672|gb|EEN59364.1| hypothetical protein BRAFLDRAFT_80346 [Branchiostoma floridae]
Length = 1222
Score = 43.9 bits (102), Expect = 0.14, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKY 287
+ + L LG +GD AV+Y+ S++ M+ + H ++ SLN +G+
Sbjct: 863 HIASSLNNLGSALMNLGDHKKAVSYYEQSLQ--MERIIHGENTAHPDIASSLNNLGNAWG 920
Query: 288 YGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
GD + A SYY +SLN+R ++ P D+A SL + + + +G+ AV
Sbjct: 921 NLGDHKKAVSYYEQSLNIRLIIYGENTTHP----DIASSLYNLGNACKGLGDHKKAVSYH 976
Query: 348 QEAIK 352
+++++
Sbjct: 977 EQSLR 981
Score = 43.5 bits (101), Expect = 0.16, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LG+ C+ +GD AV+Y S+ + ++ H S SL +G+ GD + A
Sbjct: 959 LGNACKGLGDHKKAVSYHEQSLRMRRTIYGENTAHPHIAS-SLGNLGNAWSDLGDHKKAV 1017
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
SY+ +SL +RR ++ P +A SL + R++G+ AV ++++++
Sbjct: 1018 SYHEQSLQMRRIIYGENTAHPH----IASSLYNLGSAWRNLGDHKKAVSYYEQSLQ 1069
Score = 37.7 bits (86), Expect = 10.0, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 208 LCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMD 267
+C + + + + + + + +L LGD C +GD AV+Y+ S++ + + +
Sbjct: 490 ICLDKLLQNYQTRLDEASIHPNISQILYKLGDACLNIGDHKKAVSYYERSLQMMQTIYGE 549
Query: 268 D------LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVL 321
+ +++ ++++L +GD K A SY+ +SL ++R + P
Sbjct: 550 NNAHPLIAGLLNNMALALRHLGDKK-------KAISYHEQSLQMKRTIYGETNAHPG--- 599
Query: 322 DVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLT 358
+ SL + + +G+ A+ ++++++ +E +T
Sbjct: 600 -ITSSLNNLGNALMDLGDHRKAISYYEQSLQ-MERIT 634
>gi|195485148|ref|XP_002090969.1| GE13404 [Drosophila yakuba]
gi|194177070|gb|EDW90681.1| GE13404 [Drosophila yakuba]
Length = 1574
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 242 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 299
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 300 IVYKLVPG 307
>gi|390461119|ref|XP_002746106.2| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Callithrix jacchus]
Length = 323
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 96 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 155
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 156 QDIVYKLVPG 165
>gi|350422954|ref|XP_003493340.1| PREDICTED: hypothetical protein LOC100746991 [Bombus impatiens]
Length = 1391
Score = 43.9 bits (102), Expect = 0.14, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L+C +C + + C H +C++CI ++ K CP+C + K I D TL
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYLENNKYCPICEVQVHKSKPLLNIRPDHTL 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|301781873|ref|XP_002926352.1| PREDICTED: RING finger protein 180-like [Ailuropoda melanoleuca]
gi|281337536|gb|EFB13120.1| hypothetical protein PANDA_015986 [Ailuropoda melanoleuca]
Length = 591
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L
Sbjct: 431 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNSATK 490
Query: 145 RFI-EGHARIKRSHTNS 160
RF + + +IK+S S
Sbjct: 491 RFFPKEYMKIKQSFQKS 507
>gi|392343333|ref|XP_003754856.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 144
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIE------KIEADTTL 139
+SC IC+ L + + T C H +CK+CI + + CP C + + D L
Sbjct: 33 ISCSICKGYLIDATAITECLHTFCKSCIVKHFEHSNRCPKCNIIVHDAKPHNNLRMDPQL 92
Query: 140 QDVVDRFIEG 149
Q++V + +EG
Sbjct: 93 QNIVYKLVEG 102
>gi|348529700|ref|XP_003452351.1| PREDICTED: polycomb group RING finger protein 6-like [Oreochromis
niloticus]
Length = 256
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 56 EHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKA 115
E G+ + SDS D ++P + Y + C +C L + + T C H +CK+
Sbjct: 12 EGSGNASDSDSEDEPTLPLNQFYPY---------IRCALCCGFLIDATTITECLHTFCKS 62
Query: 116 CISRF----KDCPLCGADIEK------IEADTTLQDVVDRFIEGHARIKRSHTNSDKEED 165
CI + CP C + + I D LQD+V + + ++R + +E
Sbjct: 63 CIVKHFFYSNKCPTCSIIVHQTQPLYNIRPDRQLQDIVYKMVPFLEELEREQMCNFYKER 122
Query: 166 EAGENKKVI 174
K VI
Sbjct: 123 GLDVPKPVI 131
>gi|194883476|ref|XP_001975827.1| GG22533 [Drosophila erecta]
gi|190659014|gb|EDV56227.1| GG22533 [Drosophila erecta]
Length = 1573
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 237 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 294
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 295 IVYKLVPG 302
>gi|432091208|gb|ELK24417.1| Polycomb group RING finger protein 3 [Myotis davidii]
Length = 298
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 71 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 130
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 131 QDIVYKLVPG 140
>gi|345497763|ref|XP_001599271.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like, partial [Nasonia vitripennis]
Length = 577
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVV 143
G L C++C LL++ TPC H YC C+ R D CPLC + A + Q V
Sbjct: 218 GDLDCILCCRLLYK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADYLASS--QKTV 274
Query: 144 DRFIEGHARI 153
F+E +I
Sbjct: 275 TEFVERALKI 284
>gi|260812982|ref|XP_002601199.1| hypothetical protein BRAFLDRAFT_75641 [Branchiostoma floridae]
gi|229286490|gb|EEN57211.1| hypothetical protein BRAFLDRAFT_75641 [Branchiostoma floridae]
Length = 2401
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 187 VQQAMRAFRAQNVESAKSRLSLC-TEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMG 245
++QA+R R+Q E RL L D D++ + L LG G
Sbjct: 655 LEQALRIRRSQLTE----RLYLYFANDFEDKLRDL-------------LNRLGLAYHGWG 697
Query: 246 DADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNV 305
A++YF +S++ + D E + ++ + N +G+ + GD + A YY ++L +
Sbjct: 698 KYRKAISYFEESLDTKRNVNDQDNES-NGIATTWNNLGETFRFLGDFKKAIDYYEQALQI 756
Query: 306 RRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR----LESLTLKP 361
+R + + P ++A+ + S+G+ A+ F++A++ T+ P
Sbjct: 757 KRSVYGQSTAHP----EIAILYNNLGLASHSLGDHRKAISYFEQALQMDRIVYGQTTVHP 812
Query: 362 EEAGL 366
E A L
Sbjct: 813 EIAHL 817
>gi|390335217|ref|XP_003724093.1| PREDICTED: polycomb group RING finger protein 1-like
[Strongylocentrotus purpuratus]
gi|390369992|ref|XP_003731748.1| PREDICTED: polycomb group RING finger protein 1-like
[Strongylocentrotus purpuratus]
Length = 241
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C++C + + T C H +CK+CI ++ K CP+C + + + D T+
Sbjct: 22 IVCILCAGYYIDATTVTECLHTFCKSCIVKYLQTSKICPMCNQKVHETQPVLNLRPDRTM 81
Query: 140 QDVVDRFI 147
QDVV + +
Sbjct: 82 QDVVLKLV 89
>gi|403367860|gb|EJY83755.1| E3 ubiquitin-protein ligase CHFR [Oxytricha trifallax]
Length = 781
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS----RFKDCPLCGADIEKIEADTTLQDVVDR 145
C IC + + PC H +C C S R KDCP C + +++ ++ + ++++
Sbjct: 197 FDCGICYMTMHQAVSLMPCLHTFCGGCFSDWMTRAKDCPSCREPVTEVKKNSLINNLIEN 256
Query: 146 FIEGHARIKR 155
+ + +KR
Sbjct: 257 YHSLNPNLKR 266
>gi|443728546|gb|ELU14846.1| hypothetical protein CAPTEDRAFT_128203 [Capitella teleta]
Length = 268
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C+ L + S C H +C++C+ RF CP+CG + + + D TL
Sbjct: 59 VTCRLCKGYLIDASTIQKCLHSFCRSCLVRFLASNHACPVCGVLLNRSEPLLNVRLDRTL 118
Query: 140 QDVVDRFIEG 149
Q++V + + G
Sbjct: 119 QNLVYKLVPG 128
>gi|390627638|gb|AEY75223.2| putative E3 ubiquitin protein ligase DRIP2 [Vigna unguiculata]
Length = 433
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGAD-----IEKIEADTT 138
++C +C L E + + C H +C+ CI ++CP+C D +EK+ D
Sbjct: 18 MTCPLCNKFLKEATAISLCLHTFCRKCIYDKITDEELENCPVCNIDLGIVPLEKMRPDHN 77
Query: 139 LQDVVDRFIEGHARIKRS 156
LQD+ ++ + R +++
Sbjct: 78 LQDLRNKIFPFNKRKQKA 95
>gi|193643640|ref|XP_001947143.1| PREDICTED: polycomb group RING finger protein 3-like [Acyrthosiphon
pisum]
Length = 224
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 14 ITCKICRGYLVDATTVTECLHTFCKSCLVKHLEENNSCPTCQIVIHQSHPLQYISFDRTM 73
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 74 QDIVFKLVPG 83
>gi|24653251|ref|NP_523725.2| posterior sex combs [Drosophila melanogaster]
gi|76803812|sp|P35820.2|PSC_DROME RecName: Full=Polycomb group protein Psc; AltName: Full=Protein
posterior sex combs
gi|7303376|gb|AAF58434.1| posterior sex combs [Drosophila melanogaster]
gi|71043368|gb|AAZ20646.1| posterior sex combs [Drosophila melanogaster]
gi|269914199|gb|ACZ52619.1| MIP14548p [Drosophila melanogaster]
Length = 1601
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 263 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 320
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 321 IVYKLVPG 328
>gi|390459953|ref|XP_002744964.2| PREDICTED: E3 ubiquitin-protein ligase RNF180 [Callithrix jacchus]
Length = 676
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 516 CAVCLDIYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 575
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 576 TFFTKEYLKIKQSFQKSN 593
>gi|260826373|ref|XP_002608140.1| hypothetical protein BRAFLDRAFT_91381 [Branchiostoma floridae]
gi|229293490|gb|EEN64150.1| hypothetical protein BRAFLDRAFT_91381 [Branchiostoma floridae]
Length = 372
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
LG+ CR +GD A++Y S++ M+ + + +H ++ SLN +G GD + A
Sbjct: 167 LGNACRNLGDHRKAISYHEQSLQ--MRRSIYGEDTVHPDIAESLNNLGVAWSRLGDRRKA 224
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+YY SL + R + P D+A+SL + R++G A+ ++++++
Sbjct: 225 IAYYEHSLQMTRRLYGEGTAHP----DIAISLTCLGLAYRNLGEHKKAIIYYEQSLR 277
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 21/141 (14%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG+ +GD AV+Y S++ M+ + + H ++ SLN +G+ Y GD
Sbjct: 76 LNNLGNDWSHLGDCRKAVSYHEQSLQ--MRRSIYGKDTAHPDIAESLNNLGNAWGYLGDN 133
Query: 293 QAARSYYVRSLNVR-----RDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
+ A YY +SL ++ D R D+A+S + + R++G+ A+
Sbjct: 134 RKAIVYYEQSLQIKLSIYGEDTAHR---------DIALSFYNLGNACRNLGDHRKAISYH 184
Query: 348 QEAIKRLESL----TLKPEEA 364
+++++ S+ T+ P+ A
Sbjct: 185 EQSLQMRRSIYGEDTVHPDIA 205
>gi|326523247|dbj|BAJ88664.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR-FKD-----CPLCGADI-----EKIEADTT 138
L+C +C+ LL + + T C H +C+ CIS+ F D CP C D+ EK+ D +
Sbjct: 42 LTCPLCRRLLRDAATITECLHTFCRKCISKEFIDKEICYCPTCNIDLGCAPEEKLRVDHS 101
Query: 139 LQDVVDRFIEGHAR 152
LQ V + R
Sbjct: 102 LQYVRSKIFPSKRR 115
>gi|194336771|ref|YP_002018565.1| hypothetical protein Ppha_1712 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309248|gb|ACF43948.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 817
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
LGD A+G+ D A+ +F D +L ++ + L++S K+GD G+L
Sbjct: 477 LGDTHSALGNLDKALTFFDDETRLFEELYEAYPQNVSFKNGLAISYEKLGDTHSALGNLD 536
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A +++ + ++ + + S +A+S +K+ + ++GN D A+ F + +
Sbjct: 537 KALTFFDERSRLGKELYEAYPQNVSFKNGLAISYSKLGETHSALGNLDKALTFFDDETRL 596
Query: 354 LESL 357
E L
Sbjct: 597 FEEL 600
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
LG+ A+G+ D A+ +F D +L ++ + L++S K+GD G+L
Sbjct: 573 LGETHSALGNLDKALTFFDDETRLFEELYEAYPQNVSFKNGLAISYEKLGDTHSALGNLD 632
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
A +++ + ++ + + S +A+S +K+ + ++GN D A+ F E
Sbjct: 633 KALTFFDERSRLGKELYEAYPQNVSFKNGLAISYSKLGETHSALGNLDKALTFFDE 688
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEF---LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
LGD A+G+ D A+ +F + L + ++ + L++S +K+G+ G+L
Sbjct: 621 LGDTHSALGNLDKALTFFDERSRLGKELYEAYPQNVSFKNGLAISYSKLGETHSALGNLD 680
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
A +++ + ++ + + S +A+S K+ D ++GN D A+ F E
Sbjct: 681 KALTFFDERSRLGKELYEAYPQNVSFKNGLAISYEKLGDTHSALGNLDKALTFFDE 736
>gi|8358|emb|CAA41965.1| posterior sex combs [Drosophila melanogaster]
Length = 1603
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 265 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 322
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 323 IVYKLVPG 330
>gi|389747252|gb|EIM88431.1| hypothetical protein STEHIDRAFT_146434 [Stereum hirsutum FP-91666
SS1]
Length = 346
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQD 141
+G LSC IC AL ++ TPC H +C C+ R D CPLC D+ T QD
Sbjct: 1 MGDLSCEICFALFYQ-PVTTPCQHTFCAKCLQRSLDHSSQCPLCRQDLSGF---TYFQD 55
>gi|33150610|gb|AAP97183.1|AF087884_1 RNF3A-2 [Homo sapiens]
Length = 238
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + ++ D +
Sbjct: 24 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVM 83
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 84 QDIVYKLVPG 93
>gi|254581628|ref|XP_002496799.1| ZYRO0D08404p [Zygosaccharomyces rouxii]
gi|186703906|emb|CAQ43591.1| Postreplication repair E3 ubiquitin-protein ligase RAD18
[Zygosaccharomyces rouxii]
gi|238939691|emb|CAR27866.1| ZYRO0D08404p [Zygosaccharomyces rouxii]
Length = 409
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLCGADIEKIEADTTLQDVVDRFI 147
C IC+ LL + TPCSH +C CI +R CPLC +++ E++ + +V+ I
Sbjct: 28 CHICKDLL-KIPVLTPCSHTFCSLCIREYLTREPKCPLCLSELR--ESNLRSEFLVNEII 84
Query: 148 EGHARIKRSHTNSDKEEDEAGENKKVI 174
E + ++ S KE+ K +I
Sbjct: 85 ESYRSVRDELLESLKEDQRNNAEKSLI 111
>gi|294880981|ref|XP_002769198.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239872449|gb|EER01916.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 134
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 41 AASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLF 100
A S ++ + PQ G K + DS +S+ +P + + L C ICQ L++
Sbjct: 14 APSTQSAQQPTTPQLS--GQKRRRDS-NSSELPGEEEIAEE--------LRCAICQDLMY 62
Query: 101 ECSKCTPCSHVYCKACIS----RFKDCPLCGADIEKIEADTTLQDVVDRFIE 148
C H +C +C+S R DCP C + + ++ + T+ ++ ++ +E
Sbjct: 63 RPVMVLDCLHNFCSSCLSQWLQRHTDCPQCRSRVRSVKPNRTVVNLTEKLVE 114
>gi|432880346|ref|XP_004073652.1| PREDICTED: polycomb group RING finger protein 3-like [Oryzias
latipes]
Length = 249
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C+ L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 23 ITCRLCEGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 82
Query: 140 QDVVDRFIEG--HARIKR 155
QD+V + + G A IK+
Sbjct: 83 QDIVYKLVPGLQEAEIKK 100
>gi|397514494|ref|XP_003827519.1| PREDICTED: E3 ubiquitin-protein ligase RNF180 [Pan paniscus]
Length = 739
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 579 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 638
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 639 TFFTKEYLKIKQSFQKSN 656
>gi|170059595|ref|XP_001865431.1| posterior sex combs protein [Culex quinquefasciatus]
gi|167878320|gb|EDS41703.1| posterior sex combs protein [Culex quinquefasciatus]
Length = 1324
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK----IEADTTLQD 141
++C +C+ L + + C H +C +CI + + CP C I K I+ D TLQ
Sbjct: 49 ITCNLCKGYLIDATTIVECLHSFCHSCIMKHLRTEQYCPQCEMMINKAKPNIKPDATLQA 108
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 109 IVYKLVPG 116
>gi|82571652|gb|AAI10243.1| PCGF1 protein [Bos taurus]
Length = 247
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIE------ADTTL 139
+ C +C + + T C H +CK+CI ++ K CP+C I + + D +
Sbjct: 33 IVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNHKLDRVM 92
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 93 QDIVYKLVPG 102
>gi|391337288|ref|XP_003743002.1| PREDICTED: uncharacterized protein LOC100900541 [Metaseiulus
occidentalis]
Length = 1015
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLC-----GADIEK-IEADT 137
L+C +C + + C H +C+ CI ++F CP+C G + + + +D+
Sbjct: 13 LTCPLCHGYFVDATTIVECLHSFCRTCIIKHLSKNQFPFCPVCKFQLAGTKLHQYLRSDS 72
Query: 138 TLQDVVDRFIEGHAR 152
TLQD+V + + R
Sbjct: 73 TLQDIVYKLVPSLFR 87
>gi|357161750|ref|XP_003579192.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 479
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGADI-----EKIEADTT 138
++C +CQ L E + C H +C+ CI + CP+C D+ EK+ AD
Sbjct: 87 ITCPLCQRYLREATTICECLHTFCRKCIYKKLAVEELNHCPVCKIDLGCAPAEKLRADHN 146
Query: 139 LQDVVDRFI 147
LQ + + I
Sbjct: 147 LQALRSKLI 155
>gi|260826359|ref|XP_002608133.1| hypothetical protein BRAFLDRAFT_91388 [Branchiostoma floridae]
gi|229293483|gb|EEN64143.1| hypothetical protein BRAFLDRAFT_91388 [Branchiostoma floridae]
Length = 1004
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 211 EDIRDQIERMG-NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDL 269
+ +++ I + G NT+ + A L LG R +GD A +Y+ S++ + +D
Sbjct: 800 QTLQNYISKHGKNTAH--RDVAASLNNLGAAWRELGDHRKAFSYYEQSLQMRQSIYGEDT 857
Query: 270 ---EIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVS 326
+I ++L+ N GDL GD + A SYY ++L ++R + + P D+A
Sbjct: 858 AHPDIANSLNNLGNAWGDL----GDHRKAFSYYEKALQMKRSIYGKGTAHP----DIAHF 909
Query: 327 LAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
L + +GN AV ++++++ S+
Sbjct: 910 LNNLGGALGKLGNFKKAVSYYEQSLQMRRSI 940
>gi|195150625|ref|XP_002016251.1| GL10594 [Drosophila persimilis]
gi|194110098|gb|EDW32141.1| GL10594 [Drosophila persimilis]
Length = 1624
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 283 CHLCQGYLINATTIVECLHSFCHSCLINHLRKDRF--CPRCEMVINNAKPNIKSDTTLQA 340
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 341 IVYKLVPG 348
>gi|71043360|gb|AAZ20642.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1450
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 263 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 320
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 321 IVYKLVPG 328
>gi|403267463|ref|XP_003925852.1| PREDICTED: E3 ubiquitin-protein ligase RNF180 [Saimiri boliviensis
boliviensis]
Length = 592
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDIYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFIEG-HARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFKKEYLKIKQSFQKSN 509
>gi|198457433|ref|XP_002138393.1| GA24743 [Drosophila pseudoobscura pseudoobscura]
gi|198135976|gb|EDY68951.1| GA24743 [Drosophila pseudoobscura pseudoobscura]
Length = 1490
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 81 DAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLC---GADIEKI 133
D + F G ++C +CQ + + + C H YC++CI R CP C G +I +I
Sbjct: 20 DVRQFH-GLITCGLCQGYMIDPTTVDYCYHTYCRSCILKHLLRVAYCPQCKASGKEISEI 78
Query: 134 E--ADTTLQDVVDRFIEGHAR 152
+D TL+ ++ + + G R
Sbjct: 79 NLRSDDTLRSLIYKLVPGLYR 99
>gi|260788475|ref|XP_002589275.1| hypothetical protein BRAFLDRAFT_102517 [Branchiostoma floridae]
gi|229274451|gb|EEN45286.1| hypothetical protein BRAFLDRAFT_102517 [Branchiostoma floridae]
Length = 1401
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 233 VLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDL 292
+L +LG + GD A+ Y S+ +L ++ + E + T SV L I + GD
Sbjct: 1031 ILSILGTTYLSQGDTQKALDYLHKSLSYLQQMSDREEEHLPTTSVVLGNIAQAYQFQGDF 1090
Query: 293 QAARSYYVRSLNVRR 307
+ A+ Y V+SL + R
Sbjct: 1091 KMAKEYVVKSLEIER 1105
>gi|395734650|ref|XP_003776452.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Pongo abelii]
Length = 323
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 96 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 155
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 156 QDIVYKLVPG 165
>gi|395543302|ref|XP_003773558.1| PREDICTED: polycomb group RING finger protein 3 [Sarcophilus
harrisii]
Length = 259
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 32 ITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 91
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 92 QDIVYKLVPG 101
>gi|260795721|ref|XP_002592853.1| hypothetical protein BRAFLDRAFT_65434 [Branchiostoma floridae]
gi|229278077|gb|EEN48864.1| hypothetical protein BRAFLDRAFT_65434 [Branchiostoma floridae]
Length = 1787
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 225 ELCSQLGAVLGM--LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKI 282
E + LG + + +G C +G+ A++++ S++ L K + ++ SLN I
Sbjct: 1238 ETSAHLGIAVSLNNMGTCWDDLGEYKRAISFYEHSMKML-KAIYGESTAHQDIAASLNNI 1296
Query: 283 GDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDV 342
GD + A YY +S N+ ++ P D++VSL + IGN
Sbjct: 1297 AISWSNLGDKRKAIGYYEQSQNIWETIYGNNTAHP----DISVSLNNMGSCWSHIGNHRK 1352
Query: 343 AVDGFQEAIKRLESL 357
A+ F+ ++K +++
Sbjct: 1353 AISNFERSLKMMKAF 1367
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKY 287
+ +L +G C +GD A+++F S++ M + H ++ SLN IG
Sbjct: 978 HIALLLNNIGKCWHDLGDERKALSHFEQSLK--MTKAIYGPNTAHPDIAGSLNNIGSCWG 1035
Query: 288 YG--GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
G GDL+ A YY +SL + + + P ++A +L + + + N A+
Sbjct: 1036 TGELGDLRKAIRYYEQSLKMMKIIYGETTAHP----EIATTLGNIGNFWNKLCNHKKAIS 1091
Query: 346 GFQEAIKRLESL 357
++ +IK L+++
Sbjct: 1092 FYEHSIKMLKAI 1103
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYY 288
+ + L +G C +GD A+ Y S++ + HT ++SLN IG
Sbjct: 1420 HIASALNNMGTCWGDLGDQRKAMRYHEQSLKMWNAIYGKTTAHPHT-AMSLNNIGTCWSE 1478
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A S+Y +S+ +R+ + LD+A+SL + + ++ A+ ++
Sbjct: 1479 LGDQRKAISFYEKSVKMRKTVYGER----TAHLDIAISLNDIGKCWCDLRDQGKAISFYE 1534
Query: 349 EAIKRLESL----TLKPEEA 364
+++K ++ + T+ P+ A
Sbjct: 1535 QSLKMMKVIYGKTTVHPDIA 1554
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L +G C +GD A+ Y+ S++ + + E H ++ SLN IG
Sbjct: 1553 IAASLNNIGTCWGELGDNGKAIRYYEQSLKMRKAVYGERTE--HPDIAASLNNIGTCWNK 1610
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
G + A SY ++L + + + P D+A SL + +G++ AV+ ++
Sbjct: 1611 LGHHRKAISYQEQALKMSKAVYGETTTHP----DIAASLINIGSCWSGLGDQKKAVEYYE 1666
Query: 349 EAIKRLESL 357
+++K +++
Sbjct: 1667 QSLKMYKTI 1675
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
+G C + D A++++ S++ +MK+ + ++ SLN IG GD A
Sbjct: 1516 IGKCWCDLRDQGKAISFYEQSLK-MMKVIYGKTTVHPDIAASLNNIGTCWGELGDNGKAI 1574
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
YY +SL +R+ + P D+A SL + +G+ A+ ++A+K
Sbjct: 1575 RYYEQSLKMRKAVYGERTEHP----DIAASLNNIGTCWNKLGHHRKAISYQEQALK 1626
>gi|198457431|ref|XP_001360669.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
gi|198135975|gb|EAL25244.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
Length = 1591
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 249 CHLCQGYLINATTIVECLHSFCHSCLINHLRKDRF--CPRCEMVINNAKPNIKSDTTLQA 306
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 307 IVYKLVPG 314
>gi|189242216|ref|XP_968722.2| PREDICTED: similar to xbmi-1 protein [Tribolium castaneum]
gi|270015796|gb|EFA12244.1| hypothetical protein TcasGA2_TC005276 [Tribolium castaneum]
Length = 801
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD-----CPLCGADIEK-----IEADTTL 139
L C +C L + + T C HV+C+ CI R + CP C +K +AD +
Sbjct: 17 LVCTLCNGYLVDATTLTECHHVFCRGCILRHFETCKTACPSCNLVYKKKNQVFFKADPQI 76
Query: 140 QDVVDRFIEG 149
Q +V + + G
Sbjct: 77 QSIVYKVVPG 86
>gi|71021727|ref|XP_761094.1| hypothetical protein UM04947.1 [Ustilago maydis 521]
gi|46100544|gb|EAK85777.1| hypothetical protein UM04947.1 [Ustilago maydis 521]
Length = 1162
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
+ C +C LL+ TPC H +CK+C +R D CPLC AD+
Sbjct: 674 VECQLCYLLLYN-PLTTPCGHTFCKSCFARSLDHGDRCPLCRADM 717
>gi|417408991|gb|JAA51023.1| Putative polycomb group ring finger protein 3, partial [Desmodus
rotundus]
Length = 246
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 19 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 78
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 79 QDIVYKLVPG 88
>gi|403286806|ref|XP_003934663.1| PREDICTED: polycomb group RING finger protein 3 [Saimiri
boliviensis boliviensis]
Length = 275
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 48 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 107
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 108 QDIVYKLVPG 117
>gi|356500137|ref|XP_003518890.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
DRIP2-like [Glycine max]
Length = 450
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGAD-----IEKIEADTT 138
++C +C+ L E + + C H +C+ CI ++CP+C D +EK+ D
Sbjct: 19 MTCPLCKKFLKEATAISLCLHTFCRKCIYDKITDEELENCPVCNIDLGIVPLEKMRPDNI 78
Query: 139 LQDVVDRFIEGHAR 152
LQD+ ++ R
Sbjct: 79 LQDLRNKIFPFKKR 92
>gi|311267889|ref|XP_003131784.1| PREDICTED: E3 ubiquitin-protein ligase RNF135-like isoform 2 [Sus
scrofa]
Length = 423
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLC---GADIEKIEADTTLQ 140
L C+IC LL PC H +C+ C+ R + CP C GA ++ +T LQ
Sbjct: 19 LGCIICHELL-AWPTTLPCGHSFCRDCLVGLWEAGRRRSCPTCREGGAQPLQLRKNTMLQ 77
Query: 141 DVVDRF 146
D+ D++
Sbjct: 78 DLADKY 83
>gi|383854414|ref|XP_003702716.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Megachile rotundata]
Length = 554
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVV 143
G L C++C LL++ TPC H YC C+ R D CPLC + A + Q V
Sbjct: 217 GELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADYLASS--QKTV 273
Query: 144 DRFIE 148
F+E
Sbjct: 274 TEFVE 278
>gi|326431843|gb|EGD77413.1| hypothetical protein PTSG_12744 [Salpingoeca sp. ATCC 50818]
Length = 1679
Score = 43.5 bits (101), Expect = 0.20, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDR 145
L C IC+ +L + + PC H +C C S++ CP C ++ K+ + + ++V
Sbjct: 343 LLCSICRDVLHDAASLLPCLHTFCAGCCSQWLTSNSTCPDCRVNVRKMRRNHLVNNLVGV 402
Query: 146 FIEGHARIKR 155
+++ H KR
Sbjct: 403 YLKSHPDKKR 412
>gi|402218750|gb|EJT98826.1| hypothetical protein DACRYDRAFT_118588 [Dacryopinax sp. DJM-731
SS1]
Length = 624
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEADTTLQDVVD 144
LSC C LL + PC+H +C +C+ + CP C + + I + LQ+++D
Sbjct: 73 LSCACCAGLLHRPALLQPCNHAFCASCVVSWVRNGGTACPTCRSPSDSIHSARFLQNMID 132
Query: 145 RFIEGHARIKRSHTNSDKEEDEA 167
+ R + S KE+ EA
Sbjct: 133 LLV----RFRPEAARSLKEKQEA 151
>gi|260913918|ref|ZP_05920392.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260632005|gb|EEX50182.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 1275
Score = 43.5 bits (101), Expect = 0.20, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 254 FADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRH 313
F S E++ + P + + + LSV+ ++GD+KY + + A YY +++ + + ++
Sbjct: 980 FELSKEWVKRDPTNQ-KAMQDLSVAYERLGDVKYAQNEYENALFYYQKAIEIDKKQAEQD 1038
Query: 314 SNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKPEEAGLEQRRLSV 373
N P+ ++ S K+ +++R + D A+ + A+ + L QR L +
Sbjct: 1039 PNDPNLQRNLGFSYEKIGNINRLQKHSDQALKNYHAALDIFQQLANNQPSNRQAQRSLGI 1098
Score = 42.0 bits (97), Expect = 0.58, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 212 DIRDQIERMGNTSELCSQ-LGAVLGMLGDCCRAMGDADAAVAYFADSVEF---LMKLPMD 267
+IR Q+ + + + L LGD + A+ + S+E L+KL +
Sbjct: 885 NIRQQLSERNPENRIAQRSLSIAYKKLGDIYYLRNQSQTALHNYRASLEIDEHLVKLQPE 944
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
D + LS+S + +G+L Y + SYY + + ++ VKR + D++V+
Sbjct: 945 DDGTLRELSISYHNLGNLMYAEHQYSQSLSYYQMAFELSKEWVKRDPTNQKAMQDLSVAY 1004
Query: 328 AKVADVDRSIGNEDVAVDGFQEAIK 352
++ DV + + A+ +Q+AI+
Sbjct: 1005 ERLGDVKYAQNEYENALFYYQKAIE 1029
Score = 39.3 bits (90), Expect = 3.2, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 163 EEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVE-----------SAKSRLSLCTE 211
E+ + E + + Y+ + +E+ L+++ A R N + + ++ + E
Sbjct: 732 EKKQEAEQQTIKYQ-MELEKSKILLKEIGSAVRFLNFDLRDVLEQYVPITKQTAIYEQIE 790
Query: 212 DIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSV-EF--LMKLPMDD 268
+R+ +E N E Q+ G+ ++GD + A Y+ + EF L + +D
Sbjct: 791 HLRENLEYYSNQKE-SRQVATAYINQGNYAWSLGDLEKAGRYYQRAFKEFKILAEQAPED 849
Query: 269 LEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLA 328
+ LSV+ K+G++ + + A Y S N+R+ +R+ ++++
Sbjct: 850 PKAQQDLSVAYEKLGNIAEMQQNFRQALMNYQSSFNIRQQLSERNPENRIAQRSLSIAYK 909
Query: 329 KVADVDRSIGNEDVAVDGFQEAIKRLESLT-LKPEEAGLEQRRLSV 373
K+ D+ A+ ++ +++ E L L+PE+ G R LS+
Sbjct: 910 KLGDIYYLRNQSQTALHNYRASLEIDEHLVKLQPEDDG-TLRELSI 954
>gi|260788862|ref|XP_002589468.1| hypothetical protein BRAFLDRAFT_80108 [Branchiostoma floridae]
gi|229274645|gb|EEN45479.1| hypothetical protein BRAFLDRAFT_80108 [Branchiostoma floridae]
Length = 1754
Score = 43.5 bits (101), Expect = 0.20, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 204 SRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
+++ C E+ + + ++G +L LG C +GD AAV Y S+E MK
Sbjct: 807 TKMKTCAENALQHAQHKYGKDAVHPEIGRLLQNLGVTCVYLGDHGAAVTYLEQSLE--MK 864
Query: 264 LPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLD 322
+ H + SL+ +G GD A Y+ ++L ++R + P D
Sbjct: 865 QSVYGENTAHPEICASLHNLGAAWVKLGDPGKAMKYFEQTLQMQRSIHGEDTKHP----D 920
Query: 323 VAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+AVSL + + +G+ A+ ++A++ S+
Sbjct: 921 IAVSLGSLGGAFKELGDYRKAIIFHEQALQMRRSI 955
Score = 38.9 bits (89), Expect = 5.0, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYYGGDL 292
L +G +GD A YFA S+E + D+ HT ++ LN +G GD
Sbjct: 1320 LSSMGTAWYKLGDNKEARPYFAQSLEMYRSVHGDN--TAHTDIARVLNDLGITSNNVGDH 1377
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SY+ ++L +RR H ++ LD+A SL + +G+ + A+ +++++
Sbjct: 1378 RKAVSYHQQALQMRRSI---HGE-GTEHLDIAASLLNLGAAWAGLGDHEKAISHLEQSLQ 1433
Query: 353 RLESL 357
S+
Sbjct: 1434 MHRSI 1438
>gi|146088007|ref|XP_001465968.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070069|emb|CAM68401.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 395
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
L+C +C + + PC H++CKAC + K+CP+C I +A + +V+ ++
Sbjct: 14 LTCAVCLDSWKDPVELMPCGHIFCKACATGLKECPVCRDPIRSTKAPN--RTLVNMALQI 71
Query: 150 HARIKRSHTNSDKEE 164
+ +R +E+
Sbjct: 72 RVKCRRCQWKGTREQ 86
>gi|332818893|ref|XP_003339483.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Pan troglodytes]
Length = 329
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 102 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 161
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 162 QDIVYKLVPG 171
>gi|328875228|gb|EGG23593.1| hypothetical protein DFA_05727 [Dictyostelium fasciculatum]
Length = 648
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFK----DCPLCGADIEKIEADTTLQDVVDR 145
L C ICQ ++ +C PC H +C C ++ DCP C ++ + + + ++++
Sbjct: 329 LMCGICQEIIHKCITLIPCMHNFCACCYGDWRANSSDCPQCRTPVKSGQKNHAINNLIES 388
Query: 146 FIEGHARIKR 155
+++ + +R
Sbjct: 389 YLQKNTEKRR 398
>gi|242021573|ref|XP_002431219.1| Polycomb group RING finger protein, putative [Pediculus humanus
corporis]
gi|212516468|gb|EEB18481.1| Polycomb group RING finger protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 14 ITCKICRGYLIDATTVTECLHTFCKSCLVKHLEENNTCPTCNIVIHQSHPLQYISFDRTM 73
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 74 QDIVYKLV 81
>gi|194390576|dbj|BAG62047.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 97 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 156
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 157 QDIVYKLVPG 166
>gi|156552700|ref|XP_001599688.1| PREDICTED: polycomb group RING finger protein 3-like [Nasonia
vitripennis]
Length = 224
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + D CP C I + I D T+
Sbjct: 14 ITCKICRGYLIDATTVTECLHTFCKSCLVKHLDEKNTCPQCQIVIHQSHPLQYISFDRTM 73
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 74 QDIVYKLV 81
>gi|414868841|tpg|DAA47398.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 450
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
L+C +C LL + + + C H +C+ CI ++ D CP+C D ++K+ AD
Sbjct: 80 LTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVCKIDLGCTPVDKLRADHN 139
Query: 139 LQDVVDRFIEGHARIKRSHTNSDKEE 164
+QDV + KR N+++ E
Sbjct: 140 IQDVRSKVFP----FKRKKVNAEEAE 161
>gi|391342147|ref|XP_003745384.1| PREDICTED: uncharacterized protein LOC100901172 [Metaseiulus
occidentalis]
Length = 2646
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
L+C +C+ C H +CK+CI+R D CP C + + + D TL
Sbjct: 14 LTCTLCKGYFVNAMTLVRCMHSFCKSCINRHLDTSSACPTCQERVFRSRMDDFMVPDETL 73
Query: 140 QDVVDRFIEG 149
Q++V R + G
Sbjct: 74 QNIVYRSVPG 83
>gi|451850243|gb|EMD63545.1| hypothetical protein COCSADRAFT_171813 [Cochliobolus sativus
ND90Pr]
Length = 911
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-------------KDCPLCGADIEKIEAD 136
L+C IC LL++ C H +C AC+ + CP C A + + +
Sbjct: 18 LTCSICTDLLYQPLTLLDCLHTFCGACLKEWFAFQASTATSIHPYTCPSCRASVRTTQPN 77
Query: 137 TTLQDVVDRFIEGHARIKRSHTNSDKEED 165
T+ ++D FI+ A +R T +K+ D
Sbjct: 78 ATVTTLLDIFIK--ANPERGKTEEEKQAD 104
>gi|355709604|gb|AES03647.1| polycomb group ring finger 1 [Mustela putorius furo]
Length = 95
Score = 43.1 bits (100), Expect = 0.22, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C +C + + T C H +CK+CI ++ K CP+C I + ++ D +QD
Sbjct: 16 CCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQD 75
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 76 IVYKLVPG 83
>gi|260788606|ref|XP_002589340.1| hypothetical protein BRAFLDRAFT_77792 [Branchiostoma floridae]
gi|229274517|gb|EEN45351.1| hypothetical protein BRAFLDRAFT_77792 [Branchiostoma floridae]
Length = 1040
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG+ +GD AV+Y +++ ++++ +D H ++ SLN +G+
Sbjct: 783 IAAALDHLGEIWANLGDHRKAVSYHEQALKMMIRIYGEDTS--HPDIAASLNGLGNAWNN 840
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY+ SL + + + ++ P D+ SL + + R G++ A++ F+
Sbjct: 841 LGDHRKAISYHELSLQMNQTILGEGTSNP----DIVASLNNLGNAWRDYGDDRKAINYFE 896
Query: 349 EAI 351
++
Sbjct: 897 RSL 899
>gi|443712743|gb|ELU05907.1| hypothetical protein CAPTEDRAFT_221977 [Capitella teleta]
Length = 789
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR-FK----DCPLCGADIE---KIEADTTLQD 141
+C+ CQ L F T C H +CK C+ R FK CP C D+ K+ A+ TL+D
Sbjct: 718 FACICCQDLAF-MPVTTECGHNFCKTCLQRSFKAEVYSCPACREDLGKDYKMAANKTLRD 776
Query: 142 VVDRFIEGH 150
+++ + G+
Sbjct: 777 ILNTLVPGY 785
>gi|212274729|ref|NP_001130541.1| uncharacterized protein LOC100191640 [Zea mays]
gi|194689428|gb|ACF78798.1| unknown [Zea mays]
gi|223949863|gb|ACN29015.1| unknown [Zea mays]
gi|414868842|tpg|DAA47399.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 476
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
L+C +C LL + + + C H +C+ CI ++ D CP+C D ++K+ AD
Sbjct: 80 LTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVCKIDLGCTPVDKLRADHN 139
Query: 139 LQDVVDRFIEGHARIKRSHTNSDKEE 164
+QDV + KR N+++ E
Sbjct: 140 IQDVRSKVFP----FKRKKVNAEEAE 161
>gi|148688164|gb|EDL20111.1| polycomb group ring finger 3, isoform CRA_c [Mus musculus]
Length = 253
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 27 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 86
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 87 QDIVYKLVPG 96
>gi|260814982|ref|XP_002602192.1| hypothetical protein BRAFLDRAFT_76879 [Branchiostoma floridae]
gi|229287499|gb|EEN58204.1| hypothetical protein BRAFLDRAFT_76879 [Branchiostoma floridae]
Length = 1756
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L LG R +GD A++Y+ ++E + + D ++ SLN +G
Sbjct: 1058 IASSLNNLGGAWRNLGDNRKAISYYEQALEMMRGIYGGD-NAHPNIAGSLNNLGATWSNL 1116
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SYY +SL ++R N + D+A SL + R++G+ A+ +++
Sbjct: 1117 GDNRKAISYYEQSLQMKRSIYG--ENTAHR--DIASSLNNLGAAWRNLGDNRKAISYYEQ 1172
Query: 350 AIKRLESL----TLKPEEAG 365
+++ S+ T P+ AG
Sbjct: 1173 SLQMKLSIYGEDTAHPDIAG 1192
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG R +GD A++Y+ S++ MKL + + H ++ SLN +G
Sbjct: 1146 IASSLNNLGAAWRNLGDNRKAISYYEQSLQ--MKLSIYGEDTAHPDIAGSLNNLGATWRN 1203
Query: 289 GGDLQAARSYYVRSLNVRR 307
GD + A SYY +SL +RR
Sbjct: 1204 LGDNRKAVSYYEQSLQMRR 1222
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG +GD AV+Y+ S++ MKL + + H ++ SLN +G
Sbjct: 882 IAASLNNLGGAWTNLGDNRKAVSYYEQSLQ--MKLSIYGEDTAHPDIADSLNNLGATWSN 939
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L + R ++ P ++A SL + ++G A+ ++
Sbjct: 940 LGDNRKAISYYEQALQMNRSIYGENTAHP----NIADSLNNLGATWSNLGANRKAISYYE 995
Query: 349 EAIK 352
++++
Sbjct: 996 QSLQ 999
>gi|431897351|gb|ELK06613.1| Polycomb group RING finger protein 3 [Pteropus alecto]
Length = 226
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADT 137
++C +C L + + T C H +C++C+ ++ + CP C I + I D
Sbjct: 13 AHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDR 72
Query: 138 TLQDVVDRFIEGHARIKRSHTNSDKEED-EAGENKK 172
T+QD+V + + G ++ T +D + EA E K+
Sbjct: 73 TMQDIVYKLVPG---LQEGETKADDSSNKEAAEEKQ 105
>gi|401623695|gb|EJS41784.1| psh1p [Saccharomyces arboricola H-6]
Length = 408
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD--------CPLCGADIEKIEA-DT 137
I L C IC +F TPC H YC C++ + CP C +DI I A +T
Sbjct: 25 IESLVCSICHDYMF-VPMMTPCGHNYCYGCLNTWFSSNTQKELACPQCRSDITTIPALNT 83
Query: 138 TLQDVVDRFIE 148
TLQ + IE
Sbjct: 84 TLQQYLSFIIE 94
>gi|357602248|gb|EHJ63321.1| putative ring finger protein 8-like protein [Danaus plexippus]
Length = 527
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 45/106 (42%), Gaps = 16/106 (15%)
Query: 47 VENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCT 106
VEN K EH+ +I FG +S L C IC A LF +
Sbjct: 306 VENENKKLLEHNTSPENKGGCSKDTITE---FGEIMES----ELQCSIC-AELFVQATTL 357
Query: 107 PCSHVYCKACISRF----KDCPLCGADIEKIEADTTLQDVVDRFIE 148
CSH +CK CI+ + K+CP+C A I V+D FIE
Sbjct: 358 NCSHTFCKYCITMWKKKKKECPICRAPI----TSECKSLVLDSFIE 399
>gi|311267887|ref|XP_003131783.1| PREDICTED: E3 ubiquitin-protein ligase RNF135-like isoform 1 [Sus
scrofa]
Length = 423
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLC---GADIEKIEADTTLQ 140
L C+IC LL PC H +C+ C+ R + CP C GA ++ +T LQ
Sbjct: 19 LGCIICHELL-AWPTTLPCGHSFCRDCLVGLWEAGRRRSCPTCREGGAQPLQLRKNTMLQ 77
Query: 141 DVVDRF 146
D+ D++
Sbjct: 78 DLADKY 83
>gi|195150629|ref|XP_002016253.1| GL11486 [Drosophila persimilis]
gi|194110100|gb|EDW32143.1| GL11486 [Drosophila persimilis]
Length = 1495
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 81 DAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLC----GADIEK 132
D + F G ++C +CQ + + + C H YC++CI R CP C G +I +
Sbjct: 20 DVRQFH-GLITCGLCQGYMIDPTTVDYCYHTYCRSCILKHLLRVAYCPQCKASGGKEISE 78
Query: 133 IE--ADTTLQDVVDRFIEGHAR 152
I +D TL+ ++ + + G R
Sbjct: 79 INLRSDDTLRSLIYKLVPGLYR 100
>gi|165932346|ref|NP_001107033.1| E3 ubiquitin-protein ligase RNF180 isoform 1 [Homo sapiens]
gi|118573800|sp|Q86T96.2|RN180_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF180; AltName:
Full=RING finger protein 180
gi|119571759|gb|EAW51374.1| ring finger protein 180, isoform CRA_b [Homo sapiens]
Length = 592
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFTKEYLKIKQSFQKSN 509
>gi|395848815|ref|XP_003797038.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Otolemur garnettii]
Length = 771
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L FE TPC H +C C+ R D CPLC + K
Sbjct: 471 SFDASDLECALCMRLFFE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 529
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 530 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 560
>gi|398016089|ref|XP_003861233.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499458|emb|CBZ34531.1| hypothetical protein, conserved [Leishmania donovani]
Length = 394
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
L+C +C + + PC H++CKAC + K+CP+C I +A + +V+ ++
Sbjct: 14 LTCAVCLDSWKDPVELMPCGHIFCKACATGLKECPVCRDPIRSTKAPN--RTLVNMALQI 71
Query: 150 HARIKRSHTNSDKEE 164
+ +R +E+
Sbjct: 72 RVKCRRCQWKGTREQ 86
>gi|117645908|emb|CAL38421.1| hypothetical protein [synthetic construct]
gi|261857698|dbj|BAI45371.1| ring finger protein 180 [synthetic construct]
Length = 592
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFTKEYLKIKQSFQKSN 509
>gi|449274339|gb|EMC83581.1| Polycomb group RING finger protein 3 [Columba livia]
Length = 250
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 23 ITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 82
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 83 QDIVYKLVPG 92
>gi|348511775|ref|XP_003443419.1| PREDICTED: polycomb group RING finger protein 3-like [Oreochromis
niloticus]
Length = 241
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C+ L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCEGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|157818223|ref|NP_001100405.1| uncharacterized protein LOC302366 [Rattus norvegicus]
gi|149055522|gb|EDM07106.1| rCG38166 [Rattus norvegicus]
Length = 232
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
+SC IC+ L + + T C H +CK+CI + + CP C + + + D L
Sbjct: 121 ISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNRCPKCNIIVHEAKPHNNLRMDPQL 180
Query: 140 QDVVDRFIEG 149
Q++V + + G
Sbjct: 181 QNIVYKLVSG 190
>gi|260814684|ref|XP_002602044.1| hypothetical protein BRAFLDRAFT_94455 [Branchiostoma floridae]
gi|229287349|gb|EEN58056.1| hypothetical protein BRAFLDRAFT_94455 [Branchiostoma floridae]
Length = 1368
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
+G C +GD A+ Y S+E + K+ + +++SLN IG + G+ A
Sbjct: 1229 IGSCWGDLGDKRKAIKYHEQSLE-MRKVVYGETTAHPDVAMSLNNIGLCCHELGEQGKAL 1287
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLES 356
SY+ +S +R+ + P D+A SL + +GN+ A+ F++++K +++
Sbjct: 1288 SYFEQSEKMRKAIYGDTTPHP----DIASSLHNIGACWNKLGNQSKALSYFEQSVKMMKA 1343
Query: 357 LTLKPEEAGLEQRRLSVLEFLNNQL 381
+ PE + Q L ++ L N L
Sbjct: 1344 I-YGPEHPEVVQ-TLHIIRILRNAL 1366
>gi|260808187|ref|XP_002598889.1| hypothetical protein BRAFLDRAFT_90085 [Branchiostoma floridae]
gi|229284164|gb|EEN54901.1| hypothetical protein BRAFLDRAFT_90085 [Branchiostoma floridae]
Length = 740
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 202 AKSRLSLCTEDIRDQIERMG-NTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEF 260
+K+ +S+ E +R + G NT+ + A L LG +GD A++YF S+
Sbjct: 508 SKTGVSVYEESLRVRKTIYGDNTAH--PDIAASLHNLGLSWFELGDNKKAISYFEQSLSK 565
Query: 261 LMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKR---HSNV 316
+ L D+ H +++SL+ +G + GD + A YY +SL++++ H ++
Sbjct: 566 MKTLYGDN--TAHPGIAISLHSLGSAWFEVGDNRKAIGYYQQSLSMQKTFYGHNTAHPDI 623
Query: 317 PSQVLDVAVSLAKVADVDRSIG 338
+ + ++ SL+ + D ++IG
Sbjct: 624 AASLKNLGTSLSNLGDNRKAIG 645
>gi|195380025|ref|XP_002048771.1| GJ21143 [Drosophila virilis]
gi|194143568|gb|EDW59964.1| GJ21143 [Drosophila virilis]
Length = 1561
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 92 CMICQALLFECSKCTPCSHVYCKAC----ISRFKDCPLCGADIE----KIEADTTLQDVV 143
C +CQ L + C H +C +C + + + CP C I I++DTTLQ +V
Sbjct: 235 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERYCPRCEMVINNAKPNIKSDTTLQAIV 294
Query: 144 DRFIEG 149
+ + G
Sbjct: 295 YKLVPG 300
>gi|410336223|gb|JAA37058.1| ring finger protein 180 [Pan troglodytes]
Length = 592
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFTKEYLKIKQSFQKSN 509
>gi|449513766|ref|XP_002187550.2| PREDICTED: polycomb group RING finger protein 3-like [Taeniopygia
guttata]
Length = 242
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|395848817|ref|XP_003797039.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Otolemur garnettii]
Length = 730
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L FE TPC H +C C+ R D CPLC + K
Sbjct: 430 SFDASDLECALCMRLFFE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 488
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 489 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 519
>gi|260780826|ref|XP_002585539.1| hypothetical protein BRAFLDRAFT_111892 [Branchiostoma floridae]
gi|229270538|gb|EEN41550.1| hypothetical protein BRAFLDRAFT_111892 [Branchiostoma floridae]
Length = 1973
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYYGGDL 292
L +G +GD A YF S++ + ++ HT ++ LN +G YY GD
Sbjct: 1320 LSSMGSAWYKLGDNKEARPYFKQSLQMYRSVHGEN--TTHTDIARVLNDLGVNSYYLGDH 1377
Query: 293 QAARSYYVRSLNVRRDAV---KRHSNVPSQVLDVAVSLAKVADVDRSIGN 339
+ A SY+ ++L +RR H ++ + +L+ + A++ D +++I +
Sbjct: 1378 RKAVSYHQQALQMRRSIHGEGTEHPDIAASLLNFGAAWAELGDHEKAISH 1427
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 204 SRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
+++ C E+ + ++ ++G +L LG C +GD AAV Y S+E MK
Sbjct: 807 TKMKTCAENAVQEAQQRYGKDVAHPEIGRLLQNLGVTCVYLGDHKAAVTYLEQSLE--MK 864
Query: 264 LPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLD 322
+ H + SL+ +G GD A Y+ ++L ++R + P D
Sbjct: 865 QSVYGENTAHPEICASLHNLGAAWVKLGDPGKAIKYFEQTLQMQRSIHGEDTKHP----D 920
Query: 323 VAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+AVSL + + +G+ A+ ++A++ S+
Sbjct: 921 IAVSLGSLGGAFKELGDHRKAIIFHEQALQMRRSI 955
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
LG +GD AV ++ +++ M+ + + H ++ SLN +G + GD + A
Sbjct: 1499 LGKSWSDLGDHRKAVGFYQQALQ--MRRGIHGEDTAHPDVASSLNNLGIAWHDLGDYRKA 1556
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
YY +SL +RR+ + + D+A+SL+ + +G+ A+ ++A++
Sbjct: 1557 IRYYEQSLQMRRNIYGK----DTAHTDIAISLSNLGIAWNDLGDHRTAIGYHEQALQMRR 1612
Query: 356 SL 357
SL
Sbjct: 1613 SL 1614
>gi|171683591|ref|XP_001906738.1| hypothetical protein [Podospora anserina S mat+]
gi|170941755|emb|CAP67409.1| unnamed protein product [Podospora anserina S mat+]
Length = 389
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 22/104 (21%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLC--GADIEKIEADTTLQDVV 143
L C +C+ F T CSH +C CI R CPLC D+ K+ + L++ V
Sbjct: 26 LRCHVCKDF-FTTPMLTSCSHTFCSLCIRRCLTADSKCPLCRKTVDLSKLRGNGALREAV 84
Query: 144 DRF------IEGHARI---------KRSHTNSDKEEDEAGENKK 172
+ F I AR KR T+ D +DE E+K+
Sbjct: 85 EAFRGVRDSILKFARTPTPALPISPKRKATDVDNSDDEFQESKR 128
>gi|62857441|ref|NP_001016847.1| polycomb group RING finger protein 3 [Xenopus (Silurana)
tropicalis]
gi|123884065|sp|Q07G17.1|PCGF3_XENTR RecName: Full=Polycomb group RING finger protein 3
gi|115530807|emb|CAL49402.1| polycomb group ring finger 3 [Xenopus (Silurana) tropicalis]
gi|197246226|gb|AAI68795.1| polycomb group ring finger 3 [Xenopus (Silurana) tropicalis]
Length = 242
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|357160312|ref|XP_003578725.1| PREDICTED: uncharacterized protein LOC100841891 [Brachypodium
distachyon]
Length = 398
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 74/206 (35%), Gaps = 37/206 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-----KDCPLCGADIEKIEA---DTTLQD 141
LSC IC + FE S TPC H +C C+ K CP C I + +T L +
Sbjct: 152 LSCAICLEICFEPS-TTPCGHSFCVKCLKHAASKCGKRCPKCRQLISNSRSYTINTVLWN 210
Query: 142 VVDRFIEGHARIKRSHTNS-------DKEEDEAGENKKVIYEDVSMER--GAFLVQQAMR 192
+ +RS T S K+++ N ++ D+ R G + +
Sbjct: 211 TIQLLFPSEVEARRSSTASCSASKDEVKKQNPPRSNTNLVQSDLRRSRNTGGSVSSITTQ 270
Query: 193 AFRAQNVESAKSRLSLCTEDIRDQIE-----------------RMGNTSEL-CSQLGAVL 234
+ S SR S T+ IR R G S + SQL A
Sbjct: 271 DNTNTRISSNASRRSFTTQGIRRSTTTNNTGSFVPQDTSGITGRTGGRSFVQASQLVAT- 329
Query: 235 GMLGDCCRAMGDADAAVAYFADSVEF 260
+G D DAA+AY EF
Sbjct: 330 SRVGSANPPSSDDDAALAYRLQQEEF 355
>gi|195426449|ref|XP_002061347.1| GK20868 [Drosophila willistoni]
gi|194157432|gb|EDW72333.1| GK20868 [Drosophila willistoni]
Length = 1574
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 92 CMICQALLFECSKCTPCSHVYCKAC----ISRFKDCPLCGADIE----KIEADTTLQDVV 143
C +CQ L + C H +C +C + + + CP C I I++DTTLQ +V
Sbjct: 242 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERYCPRCEMVINNAKPNIKSDTTLQAIV 301
Query: 144 DRFIEG 149
+ + G
Sbjct: 302 YKLVPG 307
>gi|410219022|gb|JAA06730.1| ring finger protein 180 [Pan troglodytes]
gi|410293888|gb|JAA25544.1| ring finger protein 180 [Pan troglodytes]
Length = 592
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFTKEYLKIKQSFQKSN 509
>gi|118104286|ref|XP_424870.2| PREDICTED: polycomb group RING finger protein 3 [Gallus gallus]
Length = 242
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|353240438|emb|CCA72308.1| hypothetical protein PIIN_06242 [Piriformospora indica DSM 11827]
Length = 872
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD-----CPLCGADIEKIEADTTLQDVVD 144
LSC C AL + PC H +C +C + + CP C ++I I +Q +++
Sbjct: 115 LSCGCCAALCYNPVIVLPCQHYFCGSCCTLWTQTGGTTCPSCRSNISSIVPSRVIQALIE 174
Query: 145 ---RFIEGHARIKRSHTNSDKEEDEAGENKKV 173
R + AR++R +D E AG++ +V
Sbjct: 175 VYLRSVPSRARVQREKEQAD-EVYTAGQSIRV 205
>gi|260781715|ref|XP_002585947.1| hypothetical protein BRAFLDRAFT_110560 [Branchiostoma floridae]
gi|229271019|gb|EEN41958.1| hypothetical protein BRAFLDRAFT_110560 [Branchiostoma floridae]
Length = 167
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYY 288
+ + LG LG+ CR GD AV Y S+ +M+ + ++ SL +G+
Sbjct: 32 HIASSLGNLGNACRHFGDHKKAVNYHEQSLR-MMRTIYGETTAHPNIASSLKNLGNAWCD 90
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SY +SL ++R P ++A SL + + R++G+ AV F+
Sbjct: 91 LGDHKKAISYLQQSLQMKRTIYGEDIAHP----EIAESLNNLGNAWRNLGDRRKAVVHFE 146
Query: 349 E 349
+
Sbjct: 147 Q 147
>gi|148688165|gb|EDL20112.1| polycomb group ring finger 3, isoform CRA_d [Mus musculus]
Length = 249
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|126332046|ref|XP_001366269.1| PREDICTED: polycomb group RING finger protein 3-like [Monodelphis
domestica]
Length = 242
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|428168838|gb|EKX37778.1| hypothetical protein GUITHDRAFT_116084 [Guillardia theta CCMP2712]
Length = 221
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 106 TPCSHVYCKACI----SRFKDCPLCGADI-----EKIEADTTLQDVVDRFIEGHARIKRS 156
T C H +CK CI S + CP C D+ EK+ D +Q++VD+ A+ +
Sbjct: 17 TECLHTFCKPCIMQHFSEYLTCPTCEKDLGPAPHEKVRTDRAMQNIVDKVFPHFAKEESV 76
Query: 157 HTNSDKEEDEAG 168
S + E EAG
Sbjct: 77 GEKSIQREAEAG 88
>gi|71043362|gb|AAZ20643.1| truncated posterior sex combs [Drosophila melanogaster]
gi|71043370|gb|AAZ20647.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1095
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 263 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 320
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 321 IVYKLVPG 328
>gi|71043358|gb|AAZ20641.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1072
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 263 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 320
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 321 IVYKLVPG 328
>gi|328722358|ref|XP_003247557.1| PREDICTED: hypothetical protein LOC100569916 [Acyrthosiphon pisum]
Length = 387
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 21/120 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIE----KIEADTTLQD 141
L C IC LF+ + C+H +C+ CI ++ K CP+C I+ I D + +
Sbjct: 105 LQCPICNEWLFKATSAN-CNHTFCETCIKKWLKINKTCPVCRTSIQYTSTSIAVDNFITN 163
Query: 142 VVDRF-----------IEGHARIKRSHTNSDKEEDEAGENKKV-IYEDVSMERGAFLVQQ 189
+ F + H + TN+D DE + + + + S+E F++Q
Sbjct: 164 LCHLFGGFTKERRESIMNAHIDDTKKKTNTDVTLDELVIDPVIGLNNNESIEEDTFIIQN 223
>gi|149028672|gb|EDL84013.1| ring finger protein 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 159
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|431895476|gb|ELK04992.1| Cytosolic purine 5'-nucleotidase [Pteropus alecto]
Length = 897
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 194
Query: 142 VVDRFI 147
+V + +
Sbjct: 195 IVYKLV 200
>gi|345330019|ref|XP_001514398.2| PREDICTED: polycomb group RING finger protein 3-like
[Ornithorhynchus anatinus]
Length = 242
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|354497382|ref|XP_003510799.1| PREDICTED: polycomb group RING finger protein 6-like [Cricetulus
griseus]
gi|344247413|gb|EGW03517.1| Polycomb group RING finger protein 6 [Cricetulus griseus]
Length = 213
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIE------KIEADTTL 139
+SC IC+ L + + T C H +CK+CI + D CP C + K+ D L
Sbjct: 102 ISCSICKGYLIDATTITECLHSFCKSCIVKHFDHSNRCPKCSIVVHQSRPHSKLRLDPHL 161
Query: 140 QDVVDRFIEG 149
Q++V + + G
Sbjct: 162 QNIVYKVVAG 171
>gi|291415352|ref|XP_002723916.1| PREDICTED: ring finger protein 3 [Oryctolagus cuniculus]
Length = 242
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|225437241|ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
gi|297735508|emb|CBI17948.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
++C +C LL + + + C H +C+ CI ++ D CP+C D +EK+ D
Sbjct: 17 MTCPLCNKLLRDATTISECLHTFCRKCIYNKISDEELECCPICNTDLGCVPLEKLRPDHN 76
Query: 139 LQDV 142
LQDV
Sbjct: 77 LQDV 80
>gi|156372680|ref|XP_001629164.1| predicted protein [Nematostella vectensis]
gi|156216158|gb|EDO37101.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C L + + C H +C++CI ++ CP C + I AD T+
Sbjct: 15 ITCKLCNGYLIDATTIIECLHTFCRSCIVKYLHENNHCPTCNVFLHHSHPMNYISADRTM 74
Query: 140 QDVVDRFIEG 149
Q++V + + G
Sbjct: 75 QEIVFKLVPG 84
>gi|355691342|gb|EHH26527.1| E3 ubiquitin-protein ligase RNF180 [Macaca mulatta]
Length = 592
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFTKEYLKIKQSFQKSN 509
>gi|355749948|gb|EHH54286.1| E3 ubiquitin-protein ligase RNF180 [Macaca fascicularis]
Length = 592
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFTKEYLKIKQSFQKSN 509
>gi|149577008|ref|XP_001520684.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Ornithorhynchus anatinus]
Length = 534
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 19/151 (12%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD------ 136
+ C +C L FE TPC H +CK C+ R D CPLC +++ A+
Sbjct: 235 VSDFECSLCMRLFFE-PVTTPCGHSFCKNCLERSLDHAPHCPLCKESLKEYLANRRFSIT 293
Query: 137 TTLQDVVDRFI-EGHARIKRSHTNSDKEEDEAGENKKVI-----YEDVSMERGAFLVQQA 190
L++++ +++ E A KR + + E +N V Y V F +
Sbjct: 294 QLLEELIQKYLPEELAERKRIYDEENAEHSNLTKNVPVFVCTMAYPTVPCPLHVF--EPR 351
Query: 191 MRAFRAQNVESAKSRLSLCTEDIRDQIERMG 221
R + +++ + +C D R+ G
Sbjct: 352 YRLMIRRCMQTGTKQFGMCVSDSRNSFADYG 382
>gi|413933115|gb|AFW67666.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 457
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGADI-----EKIEADTT 138
++C +C+ LL E + C H +C+ CI + D CP+C D+ EK+ D
Sbjct: 19 MTCPLCRGLLREATAVALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLRPDHN 78
Query: 139 LQDVVDRFI 147
LQD+ ++
Sbjct: 79 LQDIRNKVF 87
>gi|297294383|ref|XP_001086692.2| PREDICTED: RING finger protein 180-like [Macaca mulatta]
Length = 592
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFTKEYLKIKQSFQKSN 509
>gi|410463994|ref|ZP_11317468.1| hypothetical protein B193_1987 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982890|gb|EKO39305.1| hypothetical protein B193_1987 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 1062
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD +A GD A+ + ++ +L D E LS+S IG++ GD
Sbjct: 817 IGDVLQAEGDTAGALTAYRQALGIQERLAATDPKNTEWQRGLSISHESIGNILQATGDTA 876
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKR 353
A + Y L +R LD++ + K+ V + G A++ +Q+A++
Sbjct: 877 GALNAYWLVLKIREQLAATDPKNSQWQLDMSYTKEKIGSVLEATGKTAGALNAYQQALEI 936
Query: 354 LESLTLKPEEAGLEQRRLSV 373
E L + QR LSV
Sbjct: 937 RERLAATDPKNSQRQRDLSV 956
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 30/204 (14%)
Query: 182 RGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGM----- 236
R A +Q+ + A +N E + LS+ E I + ++ G+T+ + VL +
Sbjct: 835 RQALGIQERLAATDPKNTEWQRG-LSISHESIGNILQATGDTAGALNAYWLVLKIREQLA 893
Query: 237 -------------------LGDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHT 274
+G A G A+ + ++E +L D +
Sbjct: 894 ATDPKNSQWQLDMSYTKEKIGSVLEATGKTAGALNAYQQALEIRERLAATDPKNSQRQRD 953
Query: 275 LSVSLNKIGDLKYYGGDLQAARSYYVRSLNV-RRDAVKRHSNVPSQVLDVAVSLAKVADV 333
LSVS NKIGD+ GD A + Y +SL + R A N Q D+++S + +
Sbjct: 954 LSVSQNKIGDMLQATGDTAGALAAYRQSLKIAERLAAADPKNGQWQR-DLSISKINIGII 1012
Query: 334 DRSIGNEDVAVDGFQEAIKRLESL 357
++ G+ A+ +++A++ LE L
Sbjct: 1013 LQATGDIAGALTAYRQALEILERL 1036
>gi|444729340|gb|ELW69763.1| Polycomb group RING finger protein 3 [Tupaia chinensis]
Length = 345
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|26329299|dbj|BAC28388.1| unnamed protein product [Mus musculus]
gi|148688162|gb|EDL20109.1| polycomb group ring finger 3, isoform CRA_a [Mus musculus]
Length = 178
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|28076973|ref|NP_081930.1| polycomb group RING finger protein 6 [Mus musculus]
gi|77416553|sp|Q99NA9.1|PCGF6_MOUSE RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=Mel18 and Bmi1-like RING finger; AltName: Full=RING
finger protein 134
gi|13537208|dbj|BAB40780.1| mMBLR [Mus musculus]
gi|16740622|gb|AAH16195.1| Polycomb group ring finger 6 [Mus musculus]
gi|58476686|gb|AAH89460.1| Polycomb group ring finger 6 [Mus musculus]
gi|148710077|gb|EDL42023.1| polycomb group ring finger 6 [Mus musculus]
Length = 353
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 137 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 196
Query: 142 VVDRFI 147
+V + +
Sbjct: 197 IVYKLV 202
>gi|356503576|ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 445
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
++C +C L E + + C H +C+ CI + D CP+C D +EK+ D +
Sbjct: 33 MTCPLCNKLFREATTISECLHTFCRKCIYDKITDEEIECCPICNIDLGCVPLEKLRPDHS 92
Query: 139 LQDV 142
LQDV
Sbjct: 93 LQDV 96
>gi|224082740|ref|XP_002306821.1| predicted protein [Populus trichocarpa]
gi|222856270|gb|EEE93817.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
++C +C LL + + + C H +C+ CI R D CP+C + +EK+ D
Sbjct: 22 MTCPLCNKLLRDATTISECLHTFCRKCIYQRISDEGLDSCPICNINLGCIPLEKLRPDHN 81
Query: 139 LQDV 142
LQDV
Sbjct: 82 LQDV 85
>gi|31044444|ref|NP_766304.2| polycomb group RING finger protein 3 [Mus musculus]
gi|325974486|ref|NP_001100715.2| polycomb group RING finger protein 3 [Rattus norvegicus]
gi|81897475|sp|Q8BTQ0.1|PCGF3_MOUSE RecName: Full=Polycomb group RING finger protein 3; AltName:
Full=RING finger protein 3A
gi|26354234|dbj|BAC40745.1| unnamed protein product [Mus musculus]
gi|29165843|gb|AAH49266.1| Pcgf3 protein [Mus musculus]
gi|187469279|gb|AAI67000.1| Pcgf3 protein [Rattus norvegicus]
Length = 241
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|168051407|ref|XP_001778146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670468|gb|EDQ57036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS------RFKDCPLCGAD-----IEKIEADTT 138
L+C +C L++E + + C H +CK CI+ + CP+C +EK+ AD
Sbjct: 25 LTCPLCNYLIWEATTISECLHTFCKDCIAAELTNGESECCPVCHVGLGTLPLEKLRADHQ 84
Query: 139 LQDVVDRFIEGHARIKR 155
L D+ ++ + + ++
Sbjct: 85 LNDLKEKLFPSNVKKRK 101
>gi|344279068|ref|XP_003411313.1| PREDICTED: polycomb group RING finger protein 3-like [Loxodonta
africana]
Length = 242
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|326432879|gb|EGD78449.1| tetratricopeptide TPR_2 [Salpingoeca sp. ATCC 50818]
Length = 920
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 235 GMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQ 293
G LG R+ GD D A+ Y+ E +++ +D L H + + +G + GD
Sbjct: 592 GNLGQVYRSKGDYDRAIHYY----EKCLQIQLDTLGEKHPHTATTYGNLGQVYKSKGDYD 647
Query: 294 AARSYYVRSLNVRRDAV-KRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
A YY +SL ++ D + ++H D A + + V S G D A+ ++++++
Sbjct: 648 LATHYYQKSLQIKLDTLGEKHP-------DTATTYNNLGQVYNSKGEYDRAIHYYEKSLQ 700
Query: 353 -RLESL 357
+L++L
Sbjct: 701 IKLDTL 706
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 107/270 (39%), Gaps = 53/270 (19%)
Query: 109 SHVYCKAC-----ISRFKDCPLCGADIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKE 163
HVYC C I + C LQ +D E HA R++ N
Sbjct: 427 GHVYCSKCDYDRAIHYYDKC---------------LQIQLDTLGEKHAETARTYNNLGGV 471
Query: 164 EDEAGENKKV---------IYEDVSMERG---AFLVQQAMRAFRAQ-NVESAKSRLSLCT 210
GE + IY D E+ A + + + ++ + + A C
Sbjct: 472 HCSMGEYDRALEYCQQSLQIYLDTWGEKHPSTATIHNNLGQVYYSKGDYDRAIHYYEKC- 530
Query: 211 EDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLE 270
++ Q++ +G E LG + GD D A+AYF E +++ +D L
Sbjct: 531 --LQIQLDTLG---EKHPHTAGTYNNLGQVYESKGDYDRALAYF----EKCLQIQLDTLG 581
Query: 271 IIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAV-KRHSNVPSQVLDVAVSLA 328
H + + + +G + GD A YY + L ++ D + ++H + A +
Sbjct: 582 EKHPSTATTCGNLGQVYRSKGDYDRAIHYYEKCLQIQLDTLGEKHPH-------TATTYG 634
Query: 329 KVADVDRSIGNEDVAVDGFQEAIK-RLESL 357
+ V +S G+ D+A +Q++++ +L++L
Sbjct: 635 NLGQVYKSKGDYDLATHYYQKSLQIKLDTL 664
>gi|148682085|gb|EDL14032.1| mCG1030969 [Mus musculus]
Length = 257
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
+SC IC+ L + + T C H +CK+CI + + CP C + + + D L
Sbjct: 146 ISCFICKGYLIDAATITECLHTFCKSCIVKHFEHSNRCPKCNIIVHQAKPHKNLRMDPQL 205
Query: 140 QDVVDRFIEG 149
Q +V + + G
Sbjct: 206 QSIVYKLVAG 215
>gi|432901995|ref|XP_004076982.1| PREDICTED: polycomb group RING finger protein 6-like [Oryzias
latipes]
Length = 256
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 56 EHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKA 115
E + ++SDS D +P + Y + C +C L + + T C H +CK+
Sbjct: 12 EGSTNVSESDSEDETKLPLNQFYPY---------IRCGLCCGFLIDATTITECLHTFCKS 62
Query: 116 CISRF----KDCPLCGADIEK------IEADTTLQDVVDR---FIEGHAR 152
CI R CP C + + I D LQD+V + F+EG R
Sbjct: 63 CIVRHFFHSNRCPTCTIVVHQTQPLYNIRPDRQLQDIVYKMVPFLEGLER 112
>gi|407790636|ref|ZP_11137729.1| lysine decarboxylase transcriptional regulator, CadC [Gallaecimonas
xiamenensis 3-C-1]
gi|407203759|gb|EKE73744.1| lysine decarboxylase transcriptional regulator, CadC [Gallaecimonas
xiamenensis 3-C-1]
Length = 1092
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 3/171 (1%)
Query: 177 DVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGM 236
D + G L A+ + AKS L +++ +E+ + EL LGA
Sbjct: 669 DGRFQHGQTLEAMGEVAYSRGKGDEAKSALLAAQKELLPLLEQQPDNLELLKSLGANAFW 728
Query: 237 LGDCCRAMGDADAAVAYFADSVEF---LMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
LG D A +F + + + L +D LS +LN +G ++ D
Sbjct: 729 LGQMRFDQADWPGAADWFGQYLNYSQAMYDLAPEDGTAQMELSYALNSLGSVQMKLQDFA 788
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAV 344
AR+++ RSL ++ A+++ ++ DV + + +A + GN D A+
Sbjct: 789 GARNHFERSLKLKEQALEQDPEDIQRMADVIDTRSWLASAASAEGNTDEAL 839
>gi|354480425|ref|XP_003502408.1| PREDICTED: polycomb group RING finger protein 3-like [Cricetulus
griseus]
gi|344251876|gb|EGW07980.1| Polycomb group RING finger protein 3 [Cricetulus griseus]
gi|351704099|gb|EHB07018.1| Polycomb group RING finger protein 3 [Heterocephalus glaber]
Length = 241
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|260816964|ref|XP_002603357.1| hypothetical protein BRAFLDRAFT_80350 [Branchiostoma floridae]
gi|229288676|gb|EEN59368.1| hypothetical protein BRAFLDRAFT_80350 [Branchiostoma floridae]
Length = 1516
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 24/200 (12%)
Query: 164 EDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRD-------- 215
+D NK + Y + S++ + + ++ S+ L L D+ D
Sbjct: 1097 QDIGDHNKAISYHEQSLQMDQIIYGENTAH---PDIASSLDNLGLAWSDLGDYKKAVSYH 1153
Query: 216 ----QIERMGNTSELCS-QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLE 270
Q+ER+ + + A L LG+ +GD A++Y S++ MK +
Sbjct: 1154 EQSLQMERIIHGENTAHPYIAASLNNLGNAWMDLGDHKKAISYHEQSLQ--MKRIIYGEN 1211
Query: 271 IIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAK 329
H +++SLN +G++ + GD + A SY+ +SL ++R ++ P +A SL
Sbjct: 1212 TAHPDIAMSLNSLGNVWRHLGDYKKAVSYHEQSLKMKRIIYGENTAHPY----IAWSLNN 1267
Query: 330 VADVDRSIGNEDVAVDGFQE 349
+ + +G+ AV +QE
Sbjct: 1268 LGNAWMDLGDHKKAV-SYQE 1286
>gi|61557118|ref|NP_001013172.1| polycomb group RING finger protein 6 [Rattus norvegicus]
gi|77416554|sp|Q5XI70.1|PCGF6_RAT RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=RING finger protein 134
gi|53733579|gb|AAH83820.1| Polycomb group ring finger 6 [Rattus norvegicus]
Length = 351
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 194
Query: 142 VVDRFI 147
+V + +
Sbjct: 195 IVYKLV 200
>gi|301778068|ref|XP_002924449.1| PREDICTED: polycomb group RING finger protein 3-like [Ailuropoda
melanoleuca]
gi|281343092|gb|EFB18676.1| hypothetical protein PANDA_013795 [Ailuropoda melanoleuca]
Length = 242
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|260832434|ref|XP_002611162.1| hypothetical protein BRAFLDRAFT_88439 [Branchiostoma floridae]
gi|229296533|gb|EEN67172.1| hypothetical protein BRAFLDRAFT_88439 [Branchiostoma floridae]
Length = 262
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L +G C +GD A+ YF S++ M+ + H ++ SLN IG+
Sbjct: 59 IAASLNSIGTCWSDLGDQRKALGYFEQSLK--MRKAIYGETTAHPAIASSLNNIGNSWRN 116
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A Y+ +SL +++ + P D+AVSL + R++G++ A+ +
Sbjct: 117 LGDKRKALRYHEQSLKMKKAIYGETTAHP----DIAVSLNNIGMCWRNLGDKRKALRYHE 172
Query: 349 EAIK 352
+++K
Sbjct: 173 QSLK 176
>gi|401422932|ref|XP_003875953.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492193|emb|CBZ27467.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 395
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
L+C +C + + PC H++CKAC + K+CP+C + +A + +V+ ++
Sbjct: 14 LTCAVCLDSWKDPVELMPCGHIFCKACATDLKECPVCRDSVRSTKAPN--RTLVNMALQI 71
Query: 150 HARIKRSHTNSDKEE 164
+ +R +E+
Sbjct: 72 QVKCRRCQWKGTREQ 86
>gi|355709612|gb|AES03650.1| polycomb group ring finger 3 [Mustela putorius furo]
Length = 245
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 18 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 77
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 78 QDIVYKLVPG 87
>gi|195120009|ref|XP_002004521.1| GI19568 [Drosophila mojavensis]
gi|193909589|gb|EDW08456.1| GI19568 [Drosophila mojavensis]
Length = 1552
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 92 CMICQALLFECSKCTPCSHVYCKAC----ISRFKDCPLCGADIE----KIEADTTLQDVV 143
C +CQ L + C H +C +C + + + CP C I I++DTTLQ +V
Sbjct: 226 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERYCPRCEMVINNAKPNIKSDTTLQAIV 285
Query: 144 DRFIEG 149
+ + G
Sbjct: 286 YKLVPG 291
>gi|197099008|ref|NP_001125710.1| E3 ubiquitin-protein ligase RNF180 [Pongo abelii]
gi|75061862|sp|Q5RAK3.1|RN180_PONAB RecName: Full=E3 ubiquitin-protein ligase RNF180; AltName:
Full=RING finger protein 180
gi|55728938|emb|CAH91207.1| hypothetical protein [Pongo abelii]
Length = 592
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCRHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 492 TFFTKEYLKIKQSFQKSN 509
>gi|260801343|ref|XP_002595555.1| hypothetical protein BRAFLDRAFT_64624 [Branchiostoma floridae]
gi|229280802|gb|EEN51567.1| hypothetical protein BRAFLDRAFT_64624 [Branchiostoma floridae]
Length = 1363
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ A L LGD C +GD AV+Y +++ M+ + H ++ SLN +G+
Sbjct: 15 IAASLKKLGDACNNLGDHRKAVSYHEQALQ--MEWSIYGEGTAHPDIASSLNNLGNTWGD 72
Query: 289 GGDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDR----SIGNED 341
GD + A SYY +SL + R H ++ S + ++ + A +A +R G+
Sbjct: 73 LGDHRKAVSYYEQSLQMNRSIYGEGTAHPDIASSLNNLGNTWATLAITERRAWSDFGDHR 132
Query: 342 VAVDGFQEAIKRLESLTLKPEEAGLEQRRLSVLEFLNN 379
AV + E +SL +K + G +++ LNN
Sbjct: 133 KAV-SYHE-----QSLQMKRDIYGENTAHPEIVKSLNN 164
>gi|38086587|ref|XP_142049.3| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
gi|83002894|ref|XP_913741.1| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
Length = 230
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
+SC IC+ L + + T C H +CK+CI + + CP C + + + D L
Sbjct: 119 ISCFICKGYLIDAATITECLHTFCKSCIVKHFEHSNRCPKCNIIVHQAKPHKNLRMDPQL 178
Query: 140 QDVVDRFIEG 149
Q +V + + G
Sbjct: 179 QSIVYKLVAG 188
>gi|2440074|emb|CAA04477.1| ring finger protein [Homo sapiens]
Length = 247
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 20 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 79
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 80 QDIVYKLVPG 89
>gi|13537206|dbj|BAB40779.1| hMBLR [Homo sapiens]
gi|16307386|gb|AAH10235.1| Polycomb group ring finger 6 [Homo sapiens]
gi|167773431|gb|ABZ92150.1| polycomb group ring finger 6 [synthetic construct]
gi|167774201|gb|ABZ92535.1| polycomb group ring finger 6 [synthetic construct]
Length = 352
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 136 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 195
Query: 142 VVDRFI 147
+V + +
Sbjct: 196 IVYKLV 201
>gi|58761530|ref|NP_001011663.1| polycomb group RING finger protein 6 isoform a [Homo sapiens]
gi|116242703|sp|Q9BYE7.2|PCGF6_HUMAN RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=Mel18 and Bmi1-like RING finger; AltName: Full=RING
finger protein 134
gi|119570033|gb|EAW49648.1| polycomb group ring finger 6, isoform CRA_b [Homo sapiens]
gi|306921473|dbj|BAJ17816.1| polycomb group ring finger 6 [synthetic construct]
Length = 350
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 134 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 193
Query: 142 VVDRFI 147
+V + +
Sbjct: 194 IVYKLV 199
>gi|348558585|ref|XP_003465098.1| PREDICTED: polycomb group RING finger protein 3-like [Cavia
porcellus]
Length = 241
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|332027519|gb|EGI67596.1| LON peptidase N-terminal domain and RING finger protein 1
[Acromyrmex echinatior]
Length = 418
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADT--TLQD 141
G L C++C LL++ TPC H YC C+ R D CPLC + A + T+ D
Sbjct: 81 GELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADYLASSQKTVTD 139
Query: 142 VVDRFIEGHA 151
V+R ++ A
Sbjct: 140 FVERALKTVA 149
>gi|114632654|ref|XP_508012.2| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Pan
troglodytes]
gi|410212244|gb|JAA03341.1| polycomb group ring finger 6 [Pan troglodytes]
gi|410259878|gb|JAA17905.1| polycomb group ring finger 6 [Pan troglodytes]
gi|410331781|gb|JAA34837.1| polycomb group ring finger 6 [Pan troglodytes]
Length = 350
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 134 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 193
Query: 142 VVDRFI 147
+V + +
Sbjct: 194 IVYKLV 199
>gi|449433281|ref|XP_004134426.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449504181|ref|XP_004162275.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 329
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLC-----GADIEKIEA 135
+G L+C +C L + + C H +C+ CI + CP+C G +EK+ A
Sbjct: 16 MGCLTCPLCHNLFTNATTISECLHTFCRDCIYEKIAEEELEGCPVCNTNLGGVPLEKLRA 75
Query: 136 DTTLQDVVDRFIEGHAR 152
D T+ D+ ++ R
Sbjct: 76 DHTMDDLREKIFSCKWR 92
>gi|260793262|ref|XP_002591631.1| hypothetical protein BRAFLDRAFT_80730 [Branchiostoma floridae]
gi|229276840|gb|EEN47642.1| hypothetical protein BRAFLDRAFT_80730 [Branchiostoma floridae]
Length = 1417
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 227 CSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDL 285
C + L LG C + D A++Y S++ + + E H ++ +L+ +G
Sbjct: 1137 CPDIATSLHNLGFTCLYLSDYKKAISYLEQSLKMDRSIYGEGTE--HPDIASALSNLGTA 1194
Query: 286 KYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
GD + A SYY ++L ++R+ + ++ LD+A SL V + ++ + A+
Sbjct: 1195 WSGLGDHRKALSYYEQALTMQRNIYQTEAH-----LDIATSLNNVGAIWTNLADYRKAIS 1249
Query: 346 GFQEAIKRLESL 357
FQEA++ S+
Sbjct: 1250 YFQEALEMRRSI 1261
>gi|73998781|ref|XP_852021.1| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Canis
lupus familiaris]
Length = 349
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 133 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 192
Query: 142 VVDRFI 147
+V + +
Sbjct: 193 IVYKLV 198
>gi|403260162|ref|XP_003922551.1| PREDICTED: polycomb group RING finger protein 6 [Saimiri
boliviensis boliviensis]
Length = 418
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 202 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 261
Query: 142 VVDRFI 147
+V + +
Sbjct: 262 IVYKLV 267
>gi|297687308|ref|XP_002821159.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Pongo
abelii]
Length = 350
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 134 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 193
Query: 142 VVDRFI 147
+V + +
Sbjct: 194 IVYKLV 199
>gi|307191752|gb|EFN75194.1| LON peptidase N-terminal domain and RING finger protein 1
[Harpegnathos saltator]
Length = 418
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADT--TLQD 141
G L C++C LL++ TPC H YC C+ R D CPLC + A + T+ D
Sbjct: 81 GELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADYLASSQKTVTD 139
Query: 142 VVDRFIEGHA 151
V+R ++ A
Sbjct: 140 FVERALKTVA 149
>gi|114668269|ref|XP_001174801.1| PREDICTED: E3 ubiquitin-protein ligase RNF135 isoform 2 [Pan
troglodytes]
Length = 290
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI--------SRFKDCPLC---GADIEKIEADTT 138
L C+ICQ LL + PC H +C+ C+ +R CP C A ++ +T
Sbjct: 23 LGCIICQGLL-DWPATLPCGHSFCRHCLEALWGARGARRWACPTCRQGAAQQPQLRKNTL 81
Query: 139 LQDVVDRF 146
LQD+ D++
Sbjct: 82 LQDLADKY 89
>gi|410958096|ref|XP_003985657.1| PREDICTED: polycomb group RING finger protein 3 [Felis catus]
Length = 242
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|348539826|ref|XP_003457390.1| PREDICTED: hypothetical protein LOC100691952 [Oreochromis
niloticus]
Length = 706
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 18/65 (27%)
Query: 100 FECSKC---------TPCSHVYCKACISRFKD------CPLCGADIEK---IEADTTLQD 141
F+CS C TPC H +C CI+++ + CPLC EK ++ + TL++
Sbjct: 13 FQCSICLDVFTNPASTPCGHSFCMQCITKYWNGAKVFKCPLCKKSFEKRPDLQINRTLRE 72
Query: 142 VVDRF 146
+ D++
Sbjct: 73 ITDQY 77
>gi|326430493|gb|EGD76063.1| hypothetical protein PTSG_00772 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 10/66 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD-------CPLCGADIEK--IEADTTLQ 140
L C IC+ +L + + T C+HVYCK CI + + CPLC AD+ K + TL+
Sbjct: 15 LECGICKDVLKQPQR-TRCNHVYCKFCILKHLELSKSKCRCPLCKADLTKRGLSDCPTLE 73
Query: 141 DVVDRF 146
V+D+
Sbjct: 74 TVIDKM 79
>gi|158254794|dbj|BAF83368.1| unnamed protein product [Homo sapiens]
Length = 350
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 134 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 193
Query: 142 VVDRFI 147
+V + +
Sbjct: 194 IVYKLV 199
>gi|392349168|ref|XP_003750308.1| PREDICTED: polycomb group RING finger protein 2-like, partial
[Rattus norvegicus]
Length = 155
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C + + + C H +CK I R+ K CP+C + K I +D TL
Sbjct: 16 LMCALYGGYFIDTTTIVECLHSFCKTFIVRYLETNKYCPMCDVQVHKTGPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVSG 85
>gi|351705404|gb|EHB08323.1| RING finger protein 180 [Heterocephalus glaber]
Length = 593
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 433 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 492
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 493 TFFTKEYLKIKQSFQKS 509
>gi|348533582|ref|XP_003454284.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Oreochromis niloticus]
Length = 731
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEA-----DTTLQ 140
L C +C L +E TPC H +CK C+ R D CPLC +++ A +TTL
Sbjct: 435 LECSLCMRLFYE-PVTTPCGHTFCKNCLERCLDHMPQCPLCKESLKEYLASRKFKETTLL 493
Query: 141 DVVDRFIEGHARIKRSHTNSDKEEDEAGENKKV 173
D++ + +R+ T+ ++ + + K V
Sbjct: 494 DMLIKQYLSREYAERTKTHQEETRELSDLTKNV 526
>gi|71043375|gb|AAZ20649.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 907
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 263 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 320
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 321 IVYKLVPG 328
>gi|114797169|ref|YP_761964.1| hypothetical protein HNE_3291 [Hyphomonas neptunium ATCC 15444]
gi|114737343|gb|ABI75468.1| hypothetical protein HNE_3291 [Hyphomonas neptunium ATCC 15444]
Length = 705
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 238 GDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHTLSVSLNKIGDLKYYGGDLQA 294
GD C+ GD +AA + + + KL ++ + L+VS ++ +L GDL
Sbjct: 266 GDICQEAGDLEAARLRYEAAHQISQKLAHENPLSVGAQRDLAVSYTRLAELSIEAGDLGT 325
Query: 295 ARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRL 354
A +Y S ++ VK N + D++VS +K+A V + G+ A + FQ +
Sbjct: 326 ALKHYQASHDLFEWRVKSDQNSKEALQDLSVSFSKIAGVLEAAGDLSGARERFQSGLALA 385
Query: 355 ESLTLKPEEAGLEQRRLSV 373
L + + QR L +
Sbjct: 386 RQLAEAAPNSHVAQRDLMI 404
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 238 GDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHTLSVSLNKIGDLKYYGGDLQA 294
GD R GD AA A ++ +E + + + + L +SL K+GDL GDL
Sbjct: 554 GDLQREAGDLAAAQALYSAGLEVVERAAAANPKSASLHEYLCLSLGKVGDLMRETGDLSG 613
Query: 295 ARSYYVRSLNVR-RDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
AR + L+VR R A ++P+ + V+L ++++++ +G+ A++
Sbjct: 614 ARGLFRARLSVRERLAAHSRQSIPAH-WHLFVALDQLSEMEVELGDRTEAIE 664
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 245 GDADAAVAYFA---DSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVR 301
GD A+ ++ D E+ +K + E + LSVS +KI + GDL AR +
Sbjct: 321 GDLGTALKHYQASHDLFEWRVKSDQNSKEALQDLSVSFSKIAGVLEAAGDLSGARERFQS 380
Query: 302 SLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVA 343
L + R + N D+ +S +++D++R +G+ D A
Sbjct: 381 GLALARQLAEAAPNSHVAQRDLMISHLQISDIERVMGDLDAA 422
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 7/139 (5%)
Query: 208 LCTEDIRDQIERMGNTSELCSQ----LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMK 263
L E R+ ER+ ++ +Q L A LGD GD A + ++++ +
Sbjct: 472 LSFEAARESGERLAASNPGSAQARQDLAACFERLGDLLHRAGDLAGARLRYEEAIDLVAG 531
Query: 264 LPMDDLEIIHT---LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQV 320
+ + I L V NK GDL+ GDL AA++ Y L V A + S
Sbjct: 532 IAAANPSSISAQRHLWVCQNKYGDLQREAGDLAAAQALYSAGLEVVERAAAANPKSASLH 591
Query: 321 LDVAVSLAKVADVDRSIGN 339
+ +SL KV D+ R G+
Sbjct: 592 EYLCLSLGKVGDLMRETGD 610
>gi|260814952|ref|XP_002602177.1| hypothetical protein BRAFLDRAFT_76865 [Branchiostoma floridae]
gi|229287484|gb|EEN58189.1| hypothetical protein BRAFLDRAFT_76865 [Branchiostoma floridae]
Length = 1479
Score = 42.7 bits (99), Expect = 0.33, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG +GD+ A++Y+ S + M+ + + H ++ SLN +G+
Sbjct: 882 IAASLNNLGATWSNLGDSRKAISYYEQSQQ--MRRSIYGEDTAHPDIAASLNNLGEAWSN 939
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL ++R + P D+A SL + + ++G+ A+ ++
Sbjct: 940 LGDNRKAISYYEQSLQMKRSIYGEDTAHP----DIADSLNNMGEAWSNLGDNRKAISYYE 995
Query: 349 EAIKRLESL----TLKPEEAG 365
++++ S+ T P AG
Sbjct: 996 QSLQMKRSIYGEDTAHPNIAG 1016
Score = 40.8 bits (94), Expect = 1.3, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG R +GD A++Y+ S++ MK + + H ++ SLN +G GD
Sbjct: 1150 LNNLGAAWRNLGDHRKAISYYEQSLQ--MKRSIYGEDTAHPNIADSLNNMGATWSNLGDN 1207
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY ++L ++ + P ++A SL + R++G+ A+ +++A++
Sbjct: 1208 RKAISYYEQALRMKLSIYGEDTAHP----NIAGSLTNLGGAWRNLGDHRKAISYYEQALQ 1263
Query: 353 RLESL 357
+ S+
Sbjct: 1264 MMRSI 1268
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L +G+ +GD A++Y+ S++ MK + + H ++ SLN +G GD
Sbjct: 974 LNNMGEAWSNLGDNRKAISYYEQSLQ--MKRSIYGEDTAHPNIAGSLNNMGATWRNLGDH 1031
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SYY +SL ++R + P D+A SL + ++G+ A+ ++
Sbjct: 1032 RKAISYYEQSLQMKRSIYGEDTAHP----DIAASLNNLGSAWSNLGDNRKAISYYE---- 1083
Query: 353 RLESLTLKPEEAGLEQRRLSVLEFLNN 379
+SL +K G + ++ + LNN
Sbjct: 1084 --QSLQIKRSIYGEDTAHPNIADSLNN 1108
Score = 40.0 bits (92), Expect = 1.8, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ L +G R +GD A++Y+ S++ MK + + H ++ SLN +G
Sbjct: 1014 IAGSLNNMGATWRNLGDHRKAISYYEQSLQ--MKRSIYGEDTAHPDIAASLNNLGSAWSN 1071
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL ++R + P ++A SL + ++G+ A+ ++
Sbjct: 1072 LGDNRKAISYYEQSLQIKRSIYGEDTAHP----NIADSLNNMGATWSNLGDNRKAISYYE 1127
Query: 349 EAIKRLESLTLKPEEAGLEQRRLSVLEFLNN 379
+SL +K G + ++ + LNN
Sbjct: 1128 ------QSLQMKRSIYGEDTAHPNIADSLNN 1152
Score = 39.7 bits (91), Expect = 2.4, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L LG +GD A++Y+ S++ + +D H ++ SLN +G
Sbjct: 1058 IAASLNNLGSAWSNLGDNRKAISYYEQSLQIKRSIYGED--TAHPNIADSLNNMGATWSN 1115
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL ++R + P ++A SL + R++G+ A+ ++
Sbjct: 1116 LGDNRKAISYYEQSLQMKRSIYGEDTAHP----NIADSLNNLGAAWRNLGDHRKAISYYE 1171
Query: 349 EAIKRLESLTLKPEEAGLEQRRLSVLEFLNN 379
+SL +K G + ++ + LNN
Sbjct: 1172 ------QSLQMKRSIYGEDTAHPNIADSLNN 1196
>gi|114052975|ref|NP_001040032.1| polycomb group RING finger protein 3 [Bos taurus]
gi|122136146|sp|Q2KJ29.1|PCGF3_BOVIN RecName: Full=Polycomb group RING finger protein 3
gi|86822076|gb|AAI05551.1| Polycomb group ring finger 3 [Bos taurus]
gi|440911090|gb|ELR60815.1| Polycomb group RING finger protein 3 [Bos grunniens mutus]
Length = 242
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|149028673|gb|EDL84014.1| ring finger protein 3 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 203
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|440493086|gb|ELQ75594.1| putative E3 ubiquitin ligase [Trachipleistophora hominis]
Length = 238
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
L C C +L+ E T C H +CK C+ F DC +CGA + KI L+ +++++E
Sbjct: 180 LVCKYCTSLMNE-PVMTTCGHTFCKNCVI-FSDCVVCGAKVGKITERDDLKQEIEQYVEN 237
>gi|350415011|ref|XP_003490502.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Bombus impatiens]
Length = 724
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADT--TLQD 141
G L C++C LL++ TPC H YC C+ R D CPLC + A + T+ D
Sbjct: 389 GELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLVDYLASSQKTVTD 447
Query: 142 VVDRFIE 148
V+R ++
Sbjct: 448 FVERALK 454
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKI-EADTTLQDVVDRFIE 148
+C +C+ +L + T C H YCK C+ K C +CG I + E + +Q +V+++
Sbjct: 98 FACPLCEGILCQ-PVTTNCGHTYCKNCVEPGKSCRVCGQKIVAVSETNVLVQRLVEKWWP 156
Query: 149 GHARIKRSHTNSD 161
A R+ D
Sbjct: 157 REAEASRARHEGD 169
>gi|344274771|ref|XP_003409188.1| PREDICTED: polycomb group RING finger protein 6-like isoform 1
[Loxodonta africana]
Length = 346
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 130 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 189
Query: 142 VVDRFI 147
+V + +
Sbjct: 190 IVYKLV 195
>gi|194209404|ref|XP_001488220.2| PREDICTED: polycomb group RING finger protein 3-like [Equus
caballus]
Length = 242
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|31742478|ref|NP_006306.2| polycomb group RING finger protein 3 [Homo sapiens]
gi|384475911|ref|NP_001245100.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|332263104|ref|XP_003280595.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Nomascus
leucogenys]
gi|397480144|ref|XP_003811352.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Pan
paniscus]
gi|402852538|ref|XP_003890977.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Papio
anubis]
gi|402852540|ref|XP_003890978.1| PREDICTED: polycomb group RING finger protein 3 isoform 2 [Papio
anubis]
gi|426343538|ref|XP_004038353.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Gorilla
gorilla gorilla]
gi|121942537|sp|Q3KNV8.1|PCGF3_HUMAN RecName: Full=Polycomb group RING finger protein 3; AltName:
Full=RING finger protein 3A
gi|76825323|gb|AAI07062.1| Polycomb group ring finger 3 [Homo sapiens]
gi|119603058|gb|EAW82652.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|119603059|gb|EAW82653.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|119603062|gb|EAW82656.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|343960921|dbj|BAK62050.1| RING finger protein 3 [Pan troglodytes]
gi|355557419|gb|EHH14199.1| RING finger protein 3A [Macaca mulatta]
gi|355744818|gb|EHH49443.1| RING finger protein 3A [Macaca fascicularis]
gi|380784337|gb|AFE64044.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|383413781|gb|AFH30104.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|384940124|gb|AFI33667.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|410218840|gb|JAA06639.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410250096|gb|JAA13015.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410300194|gb|JAA28697.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410339339|gb|JAA38616.1| polycomb group ring finger 3 [Pan troglodytes]
Length = 242
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|390346383|ref|XP_787592.3| PREDICTED: polycomb group RING finger protein 3-like
[Strongylocentrotus purpuratus]
Length = 309
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C+ L + + T C H +CK+C+ ++ + CP C I + + D T+
Sbjct: 45 ITCKLCRGYLIDATTITECLHTFCKSCLVKYLEENNTCPTCRILIHQSHPLTYVGFDRTM 104
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 105 QDIVYKLV 112
>gi|345798510|ref|XP_855151.2| PREDICTED: polycomb group RING finger protein 3 [Canis lupus
familiaris]
Length = 242
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|260835544|ref|XP_002612768.1| hypothetical protein BRAFLDRAFT_97251 [Branchiostoma floridae]
gi|229298148|gb|EEN68777.1| hypothetical protein BRAFLDRAFT_97251 [Branchiostoma floridae]
Length = 1642
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ A L +G C +GD A+ Y+ S++ M M H ++ SLN IG
Sbjct: 1104 IAASLNNIGTCWSGLGDQRKAIRYYEQSLK--MNKAMYGETTEHPDIATSLNNIGKCWSD 1161
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A YY +SL +R+ + P D+A SL + + ++G++ A+ +
Sbjct: 1162 LGDKRKAIRYYEQSLKMRKIIYGETTAHP----DIAASLNNIGNCWSNLGDQRKAICYHE 1217
Query: 349 EAIKRLESL 357
+++K ++ +
Sbjct: 1218 QSLKMMKDI 1226
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 221 GNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSL 279
G T+E + + LG +G+C +GD A+ Y +S++ M+ + H ++ SL
Sbjct: 1052 GETTE-HPDIASSLGNIGNCWSDLGDKRKAIWYHEESLK--MRKAIYSETTAHPDIAASL 1108
Query: 280 NKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGN 339
N IG GD + A YY +SL + + + P D+A SL + +G+
Sbjct: 1109 NNIGTCWSGLGDQRKAIRYYEQSLKMNKAMYGETTEHP----DIATSLNNIGKCWSDLGD 1164
Query: 340 EDVAVDGFQEAIK 352
+ A+ +++++K
Sbjct: 1165 KRKAIRYYEQSLK 1177
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 199 VESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLG-------------MLGDCCRAMG 245
+ S+ + + LC D+ D+ + +G + A+ G +G C +G
Sbjct: 1408 IASSLNNIGLCWYDLGDKRKALGYFEQSLQMWKAIYGETTAHPHIASSLNNIGACWSDLG 1467
Query: 246 DADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLN 304
D A+ Y+ S++ M + H ++ SLN IG+ GD + A Y+ +SL
Sbjct: 1468 DKRKALMYYEQSLK--MNKAIHGETTAHPAIAASLNNIGNRWIDLGDKRKAIRYHEQSLK 1525
Query: 305 VRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ + + P D+A SL + ++ +G++ A+ +++++K
Sbjct: 1526 MTKAIYGETTAHP----DIAASLNNIGNLWSDLGDQRKAILYYEQSLK 1569
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ ++L +G C +G+ A+ Y S++ +MK + + ++ +LN IG+
Sbjct: 884 IASLLENIGVCWSELGNQSKALIYLEQSLK-MMKAIYGETTALPHIAGTLNNIGNRWSDL 942
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A YY +SL +R+ + P D+A SL + +G++ A+ + +
Sbjct: 943 GDKRKAIRYYEQSLKIRKAIYGETTAHP----DIASSLNNIGSCWSDLGDKRKALRYYDQ 998
Query: 350 AIKRLESL 357
++K E++
Sbjct: 999 SLKMRETI 1006
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L +G+ +GD A+ Y S++ + K + ++ SLN IG+L
Sbjct: 1496 IAASLNNIGNRWIDLGDKRKAIRYHEQSLK-MTKAIYGETTAHPDIAASLNNIGNLWSDL 1554
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A YY +SL +++ + P D+A SL + +GN+ A+ +++
Sbjct: 1555 GDQRKAILYYEQSLKMKKAIYGETTAHP----DIAKSLNNIGLCWNKLGNQSKALSYYEQ 1610
Query: 350 AIKRLESL 357
++K ++++
Sbjct: 1611 SVKMMKAI 1618
>gi|194205865|ref|XP_001502796.2| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 260
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKI----------EA 135
++C IC+ L + + T C H +CK CI + DCP CG ++ +
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQLKVVYKILIETLFSRL 75
Query: 136 DTTLQDVVDRFIEG 149
D TL++++ + + G
Sbjct: 76 DNTLEEIIFKLVPG 89
>gi|355783070|gb|EHH64991.1| hypothetical protein EGM_18328 [Macaca fascicularis]
Length = 350
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 134 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 193
Query: 142 VVDRFI 147
+V + +
Sbjct: 194 IVYKLV 199
>gi|226532512|ref|NP_001151476.1| LOC100285109 [Zea mays]
gi|195647044|gb|ACG42990.1| protein binding protein [Zea mays]
Length = 464
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGADI-----EKIEADTT 138
++C +C+ LL E + C H +C+ CI + D CP+C D+ EK+ D
Sbjct: 19 MTCPLCRGLLREATAIALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLRPDHN 78
Query: 139 LQDVVDRFI 147
LQD+ ++
Sbjct: 79 LQDIRNKVF 87
>gi|302564245|ref|NP_001181540.1| polycomb group RING finger protein 6 [Macaca mulatta]
gi|402881389|ref|XP_003904256.1| PREDICTED: polycomb group RING finger protein 6 [Papio anubis]
Length = 350
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 134 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 193
Query: 142 VVDRFI 147
+V + +
Sbjct: 194 IVYKLV 199
>gi|126723064|ref|NP_001075484.1| tripartite motif-containing protein 72 [Oryctolagus cuniculus]
gi|122145901|sp|Q1XH18.1|TRI72_RABIT RecName: Full=Tripartite motif-containing protein 72; AltName:
Full=Mitsugumin-53; Short=Mg53
gi|90991125|dbj|BAE93013.1| mitsugumin 53 [Oryctolagus cuniculus]
Length = 477
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFK---------DCPLCGADIEKIEADTTLQ 140
LSC +C L F+ C H +C+AC+SR +CP C A T LQ
Sbjct: 12 LSCPLCLQL-FDAPVTAECGHSFCRACLSRVAGEPAADGTVNCPCCQAPTRPQALSTNLQ 70
Query: 141 DVVDRFIEGHARIKRSH 157
+ R +EG A++ + H
Sbjct: 71 --LARLVEGLAQVPQGH 85
>gi|118344046|ref|NP_001071846.1| UHRF2 protein [Ciona intestinalis]
gi|70571420|dbj|BAE06743.1| Ci-UHRF2 [Ciona intestinalis]
Length = 743
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISR-FK----DCPLCGADIEK--IEADTTLQDVVD 144
C+ CQ ++ + TPC H CK C+ R FK CP+C D+EK IE + LQ V+
Sbjct: 675 CVCCQDVVHQ-PITTPCKHNLCKTCLQRSFKADIYSCPVCREDLEKENIEINIPLQKVLL 733
Query: 145 RFIEGHA 151
+ G+
Sbjct: 734 KLFPGYT 740
>gi|340714815|ref|XP_003395919.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like isoform 1 [Bombus terrestris]
gi|340714817|ref|XP_003395920.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like isoform 2 [Bombus terrestris]
Length = 724
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADT--TLQD 141
G L C++C LL++ TPC H YC C+ R D CPLC + A + T+ D
Sbjct: 389 GELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLVDYLASSQKTVTD 447
Query: 142 VVDRFIE 148
V+R ++
Sbjct: 448 FVERALK 454
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKI-EADTTLQDVVDRFIE 148
+C +C+ +L + T C H YCK C+ K C +CG I + E + +Q +V+++
Sbjct: 98 FACPLCEGILCQ-PVTTNCGHTYCKNCVEPGKSCRVCGQKIVAVSETNVLVQRLVEKWWP 156
Query: 149 GHARIKRSHTNSD 161
A R+ D
Sbjct: 157 REAEASRARHEGD 169
>gi|322797331|gb|EFZ19443.1| hypothetical protein SINV_00469 [Solenopsis invicta]
Length = 520
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADT--TLQD 141
G L C++C LL++ TPC H YC C+ R D CPLC + A T+ D
Sbjct: 198 GELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADYLASNQKTVTD 256
Query: 142 VVDRFIE 148
V+R ++
Sbjct: 257 FVERALK 263
>gi|296221130|ref|XP_002756615.1| PREDICTED: polycomb group RING finger protein 6 isoform 1
[Callithrix jacchus]
Length = 350
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 134 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 193
Query: 142 VVDRFI 147
+V + +
Sbjct: 194 IVYKLV 199
>gi|224111060|ref|XP_002315733.1| predicted protein [Populus trichocarpa]
gi|222864773|gb|EEF01904.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR------FKDCPLCGAD-----IEKIEADTT 138
++C +C L + + + C H +C+ CI + CP+C + +EK+ AD +
Sbjct: 18 MTCPLCNKLFRDATTISECLHTFCRKCIYKKITDEELDSCPVCDTELGCSPLEKLRADHS 77
Query: 139 LQDVVDR-FIEGHARIKRSHTNSDKEEDE 166
QD+ + F+ + K T S EDE
Sbjct: 78 WQDLRAKIFLSNRKKAKEPETVSLVPEDE 106
>gi|74208829|dbj|BAE21174.1| unnamed protein product [Mus musculus]
Length = 281
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 137 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 196
Query: 142 VVDRFI 147
+V + +
Sbjct: 197 IVYKLV 202
>gi|390332109|ref|XP_003723421.1| PREDICTED: uncharacterized protein LOC100889919 [Strongylocentrotus
purpuratus]
Length = 761
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKAC---ISRFK----DCPLCGADIEKIEADTTLQDVV 143
+C +C + ++ C PC H++C+ C ++RF CPLC I ++ L V
Sbjct: 604 TCSVCLDIYYQPHTCFPCEHIFCEPCLRQVTRFHPVVTPCPLCRTTIRNVKLHDQLTSAV 663
Query: 144 DRFI 147
+
Sbjct: 664 KQLF 667
>gi|328713971|ref|XP_001946307.2| PREDICTED: hypothetical protein LOC100161947 [Acyrthosiphon pisum]
Length = 608
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C++C + + C H +C++CI ++ K CP+C + K I D TL
Sbjct: 15 LLCVLCGGYFVDATTVIECLHSFCRSCIVKYLERNKYCPICDVLVHKSKPLSNIRPDHTL 74
Query: 140 QDVVDRFI 147
Q++V + +
Sbjct: 75 QNIVYKLV 82
>gi|117938845|gb|AAH06034.1| Rnf180 protein [Mus musculus]
Length = 310
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 150 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFLQTELNNATK 209
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 210 TFFTKEYLKIKQSFQKS 226
>gi|426253029|ref|XP_004020204.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Ovis
aries]
Length = 352
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 136 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 195
Query: 142 VVDRFI 147
+V + +
Sbjct: 196 IVYKLV 201
>gi|312065422|ref|XP_003135783.1| hypothetical protein LOAG_00195 [Loa loa]
gi|307769068|gb|EFO28302.1| hypothetical protein LOAG_00195 [Loa loa]
Length = 806
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIE-KIEADTTLQDVVD 144
PL C+IC F PC H YC+ CI K CP+CG I+ ++ D L ++D
Sbjct: 19 NPLECLICDRE-FSSPVRLPCQHNYCRECIQNRKTCPVCGIAIDGEVCPDNLLSFLID 75
>gi|344344216|ref|ZP_08775080.1| hypothetical protein MarpuDRAFT_1893 [Marichromatium purpuratum
984]
gi|343804173|gb|EGV22075.1| hypothetical protein MarpuDRAFT_1893 [Marichromatium purpuratum
984]
Length = 479
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 239 DCCRAMGDADAAVAYFA---DSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAA 295
D GD DAA F V+ L+ L ++ H L++ L++ G+LK GDL A
Sbjct: 267 DLAVIRGDLDAAERDFTLARQRVDALIALQPEEPRWQHFLALGLDRTGNLKVARGDLDGA 326
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
+ Y +L + K + D +VSL KV D+ + G+ A+ +E++ E
Sbjct: 327 QQDYDGALAISERLAKSDPSHAGWQRDRSVSLNKVGDIKAAQGDLAGALAAHEESLDIAE 386
Query: 356 SLTLK-PEEAGLEQRRLSV 373
L P AG QR L+V
Sbjct: 387 RLAESDPSHAGW-QRDLAV 404
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 4/168 (2%)
Query: 176 EDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLG 235
E + RG FL+ QA A ++++A+ +L + + I L L
Sbjct: 253 EALDTHRG-FLIDQADLAVIRGDLDAAERDFTLARQRVDALIALQPEEPRWQHFLALGLD 311
Query: 236 MLGDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHTLSVSLNKIGDLKYYGGDL 292
G+ A GD D A + ++ +L D SVSLNK+GD+K GDL
Sbjct: 312 RTGNLKVARGDLDGAQQDYDGALAISERLAKSDPSHAGWQRDRSVSLNKVGDIKAAQGDL 371
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNE 340
A + + SL++ + + D+AVS K+ V + G++
Sbjct: 372 AGALAAHEESLDIAERLAESDPSHAGWQRDLAVSYYKLGTVADARGDQ 419
>gi|113970915|ref|YP_734708.1| lysine decarboxylase transcriptional regulator, CadC [Shewanella
sp. MR-4]
gi|113885599|gb|ABI39651.1| lysine decarboxylase transcriptional regulator, CadC [Shewanella
sp. MR-4]
Length = 1063
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 169 ENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCS 228
+++K + D + G L A+ ++ A+S L E + +E + L
Sbjct: 663 DDEKYLSFDARFQHGQTLEAMGEVAYSRNKIDEARSALLAAQEKMLPLLELQPDNLALLK 722
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEF---LMKLPMDDLEIIHTLSVSLNKIGDL 285
LGA LG + D AA ++ + + + + +D + + LS + N +G +
Sbjct: 723 TLGANAFWLGQLKYDVSDWAAARPFWEQYLLYSQTMYVIAPEDKDALMELSYAHNSLGSV 782
Query: 286 KYYGGDLQAARSYYVRSLNVRRDAVKRHSNVP--SQVL-DVAVSLAKVADVDRSIGNEDV 342
+ A+ + SL ++ A+K NVP SQ++ DVA + + +A S+GN D
Sbjct: 783 SMNQQEFAKAQQDFEESLQLKLLALK---NVPEDSQLIADVADTRSWLASALTSLGNLDT 839
Query: 343 AVDGFQEAIKRLESLTLKPEEAGLEQRRLSVL 374
A+ +E +L + LKP +A + R S L
Sbjct: 840 AIKLQEETQNQLLNY-LKPNDAYMRDRLASTL 870
>gi|401422934|ref|XP_003875954.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492194|emb|CBZ27468.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 334
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
L+C +C + + PC H++CKAC + K+CP+C + +A + +V+ ++
Sbjct: 14 LTCAVCLDSWKDPVELMPCGHIFCKACATDLKECPVCRDSVRSTKAPN--RTLVNMALQI 71
Query: 150 HARIKRSHTNSDKEE 164
+ +R +E+
Sbjct: 72 QVKCRRCQWKGTREQ 86
>gi|307167420|gb|EFN61005.1| LON peptidase N-terminal domain and RING finger protein 3
[Camponotus floridanus]
Length = 555
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVV 143
G L C++C LL++ TPC H YC C+ R D CPLC + A + Q V
Sbjct: 218 GELDCILCCRLLWK-PVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLADYLASS--QKTV 274
Query: 144 DRFIE 148
F+E
Sbjct: 275 TDFVE 279
>gi|427795849|gb|JAA63376.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 2649
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIE------ADTTL 139
L+C +C+ L + C H +C++CI + + CP+C + KI D TL
Sbjct: 51 LTCKLCKGYLVDAMTLVKCLHSFCRSCILKHLETGHACPVCDLRLSKINMESHLIKDDTL 110
Query: 140 QDVVDRFIEG 149
Q+VV + + G
Sbjct: 111 QNVVYKAVPG 120
>gi|255950408|ref|XP_002565971.1| Pc22g20710 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592988|emb|CAP99359.1| Pc22g20710 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 692
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLC------GADIEKIEADTTL 139
L C +C +L+ + TPC H +C+ C++R D CP+C D++ + T+
Sbjct: 267 LDCQVCYSLVLD-PMTTPCGHTFCRKCVARVLDHTDLCPICRRKLGMPNDLQSQPVNQTV 325
Query: 140 QDVVDRFIEGHARIKRSHTNSDK 162
+VD ++R + D+
Sbjct: 326 TRLVDYLFPDQISLRRETSAQDE 348
>gi|427796033|gb|JAA63468.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 2630
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIE------ADTTL 139
L+C +C+ L + C H +C++CI + + CP+C + KI D TL
Sbjct: 32 LTCKLCKGYLVDAMTLVKCLHSFCRSCILKHLETGHACPVCDLRLSKINMESHLIKDDTL 91
Query: 140 QDVVDRFIEG 149
Q+VV + + G
Sbjct: 92 QNVVYKAVPG 101
>gi|334350182|ref|XP_001371945.2| PREDICTED: hypothetical protein LOC100018904 [Monodelphis domestica]
Length = 2255
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 49 NSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPC 108
+S P+ H D ++ D + PF QSF L C +C L +E TPC
Sbjct: 1786 DSEVPRKIHKKDTLETRETDRSH---NVPF----QSFDPTDLDCPLCMRLFYEPV-TTPC 1837
Query: 109 SHVYCKACISRFKD----CPLC 126
H +C C+ R D CPLC
Sbjct: 1838 GHTFCMKCLERSLDHNPKCPLC 1859
>gi|293342466|ref|XP_001066614.2| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 1 [Rattus norvegicus]
Length = 854
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 27/100 (27%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD------TTL 139
C +C L FE TPC H +CK C+ R D CPLC +++ AD L
Sbjct: 558 FECSLCMRLFFE-PVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLL 616
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
+D++ +++ DE E KK+ E+ +
Sbjct: 617 EDLIVKYL----------------PDELSERKKIYDEETA 640
>gi|260786244|ref|XP_002588168.1| hypothetical protein BRAFLDRAFT_68806 [Branchiostoma floridae]
gi|229273327|gb|EEN44179.1| hypothetical protein BRAFLDRAFT_68806 [Branchiostoma floridae]
Length = 1589
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L +G C +GD A++ + S++ L+ + + E +++ LN IG+
Sbjct: 1197 IASSLMNIGACFMKLGDQRKAISSYEQSLKMLLAI-YSETEQHPDIAICLNNIGNCLNLL 1255
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD A +YY ++L +R+ + P D++ SL+ + ++GN+ A+ F++
Sbjct: 1256 GDQTKAITYYEQALKMRKAIYGETTPHP----DISSSLSNIGSCWGAVGNQGKAMSYFEQ 1311
Query: 350 AIK 352
+++
Sbjct: 1312 SLE 1314
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L +G C +GD A+ Y+ S++ + K D ++ SLN IG
Sbjct: 1065 IASSLNNIGSCWSRLGDQSKALKYYELSLK-MRKAIYGDTTPHPDIAASLNNIGKCWSDL 1123
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + YY +SLN+ + + P D+A SL + +G+ A+ +++
Sbjct: 1124 GDQSKSIRYYEQSLNMIKTIYGETAKHP----DIASSLHNIGTCWSDLGDHKTAITYYKQ 1179
Query: 350 AIK 352
A+K
Sbjct: 1180 ALK 1182
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 92/228 (40%), Gaps = 36/228 (15%)
Query: 151 ARIKRSHTNSDKEEDEAGENKKVI--YED-VSMERGAFLVQQAMRAFRAQNVESAKSRLS 207
A I RS+ N E GE++K I YE+ + M R + A ++ ++ +
Sbjct: 931 AYISRSYGNIGICWRELGEHRKAISYYEESLKMRRDIYGETTA-----HPDIATSLHNFA 985
Query: 208 LCTEDIRDQIERMGNTSELCSQLGAVLG-------------MLGDCCRAMGDADAAVAYF 254
C D+ D + + + + + G +G C +G+ A+ Y+
Sbjct: 986 ACWRDLGDHRKAIRYYEQSLKTMKVIYGETAAHPDIAKSFNNIGKCWNDLGNISEALIYY 1045
Query: 255 ADSVEFLMKL-----PMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDA 309
S+ + + P D+ + SLN IG GD A YY SL +R+
Sbjct: 1046 EQSLNMVKAIYGETTPHPDI------ASSLNNIGSCWSRLGDQSKALKYYELSLKMRKAI 1099
Query: 310 VKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+ P D+A SL + +G++ ++ +++++ ++++
Sbjct: 1100 YGDTTPHP----DIAASLNNIGKCWSDLGDQSKSIRYYEQSLNMIKTI 1143
>gi|431907780|gb|ELK11387.1| RING finger protein 180 [Pteropus alecto]
Length = 580
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 420 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 479
Query: 145 RFI-EGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGA 184
F + + +IK+S S + KK + R A
Sbjct: 480 TFFTKEYLKIKQSFQKSSSAKWPLPSCKKAFHLFGGFHRRA 520
>gi|440892211|gb|ELR45503.1| hypothetical protein M91_15025 [Bos grunniens mutus]
Length = 336
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 85 FKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTL 139
++ C +C+ LLFE TPC H +C C+ R +D CPLC + ++ A +
Sbjct: 116 IEVADFKCALCRRLLFE-PVTTPCGHTFCLKCLERCQDHATHCPLCKEKLSELLASSNF 173
>gi|296316062|ref|YP_003662526.1| ubiquitin E3 ligase ICP0 [Bovine herpesvirus 5]
gi|40456187|gb|AAR86165.1| BICP0 immediate-early transactivator protein with zinc finger
[Bovine herpesvirus 5]
Length = 720
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
SC IC ++ ++ PC H +C ACI R+ + CPLC A + +
Sbjct: 20 SCCICLDVITGAARALPCLHAFCLACIRRWLEGRPTCPLCKAPVRSL 66
>gi|395828157|ref|XP_003787252.1| PREDICTED: polycomb group RING finger protein 6 [Otolemur
garnettii]
Length = 351
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 194
Query: 142 VVDRFI 147
+V + +
Sbjct: 195 IVYKLV 200
>gi|428162972|gb|EKX32071.1| hypothetical protein GUITHDRAFT_148883 [Guillardia theta CCMP2712]
Length = 477
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD--------CPLCGADIEKIEADTTLQD 141
L+C+IC +LF PC H +C AC+ R ++ CP+C + + D +
Sbjct: 189 LTCVICTEILFFPVAFLPCMHKFCGACVWRNQEAAGEGSYCCPMCRQGVTSVIRDRQCGE 248
Query: 142 VVDRFIEGH 150
V+ F++ H
Sbjct: 249 SVEAFLKKH 257
>gi|395857624|ref|XP_003804043.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Otolemur garnettii]
Length = 291
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 64 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 123
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 124 QDIVYKLVPG 133
>gi|326437016|gb|EGD82586.1| hypothetical protein PTSG_03239 [Salpingoeca sp. ATCC 50818]
Length = 1179
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEKI----EADTTLQDVV 143
C IC A E K PC H C+ CISR DC C A +E++ EADT+ V
Sbjct: 1107 CPICYAHTIEV-KFIPCEHTSCRLCISRHLQSNSDCFFCKAKVERLEDIGEADTS----V 1161
Query: 144 DRFIEGHARIKRSHTNSD 161
D G KR ++SD
Sbjct: 1162 DANNTGSTTAKRRRSSSD 1179
>gi|225718860|gb|ACO15276.1| Polycomb group RING finger protein 3 [Caligus clemensi]
Length = 230
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C ICQ L + + T C H +CK+CI + + CP C I + I D T+
Sbjct: 17 ITCKICQGYLIDATTVTECLHTFCKSCIVKHLEDSNTCPECEDTIHQSHPLDYIAFDRTM 76
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 77 QDLVYKIV 84
>gi|149690102|ref|XP_001498250.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
6-like [Equus caballus]
Length = 351
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 194
Query: 142 VVDRFI 147
+V + +
Sbjct: 195 IVYKLV 200
>gi|410976039|ref|XP_003994433.1| PREDICTED: polycomb group RING finger protein 6 [Felis catus]
Length = 272
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 56 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 115
Query: 142 VVDRFI 147
+V + +
Sbjct: 116 IVYKLV 121
>gi|350587274|ref|XP_003356878.2| PREDICTED: polycomb group RING finger protein 3-like [Sus scrofa]
Length = 202
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|146088011|ref|XP_001465969.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070070|emb|CAM68402.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 334
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
L+C +C + + PC H++CKAC + K+CP+C I +A + +V+ ++
Sbjct: 14 LTCAVCLDSWKDPVELMPCGHIFCKACATGLKECPVCRDPIRSTKAPN--RTLVNMALQI 71
Query: 150 HARIKRSHTNSDKEE 164
+ +R +E+
Sbjct: 72 RVKCRRCQWKGTREQ 86
>gi|91089673|ref|XP_974409.1| PREDICTED: similar to ring finger protein [Tribolium castaneum]
gi|270011332|gb|EFA07780.1| hypothetical protein TcasGA2_TC005337 [Tribolium castaneum]
Length = 214
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI------EKIEADTTL 139
++C IC+ L + + T C H +CK+C+ + +CP C I + I D T+
Sbjct: 14 ITCNICKGYLIDATAITECLHTFCKSCLIKHLEANTNCPTCDMVIHHSYPRQYINFDRTM 73
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 74 QDIVYKLVPG 83
>gi|91076158|ref|XP_971006.1| PREDICTED: similar to ring finger protein [Tribolium castaneum]
Length = 224
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 14 ITCKICRGYLIDATTVTECLHTFCKSCLVKHLEENNTCPTCNIVIHQSHPLQYISFDRTM 73
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 74 QDIVYKLV 81
>gi|329663653|ref|NP_001192549.1| polycomb group RING finger protein 6 [Bos taurus]
gi|296472801|tpg|DAA14916.1| TPA: Polycomb group ring finger 6-like isoform 2 [Bos taurus]
Length = 351
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 194
Query: 142 VVDRFI 147
+V + +
Sbjct: 195 IVYKLV 200
>gi|114668267|ref|XP_001174802.1| PREDICTED: E3 ubiquitin-protein ligase RNF135 isoform 3 [Pan
troglodytes]
gi|410227652|gb|JAA11045.1| ring finger protein 135 [Pan troglodytes]
gi|410295764|gb|JAA26482.1| ring finger protein 135 [Pan troglodytes]
gi|410333955|gb|JAA35924.1| ring finger protein 135 [Pan troglodytes]
Length = 436
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI--------SRFKDCPLC---GADIEKIEADTT 138
L C+ICQ LL + PC H +C+ C+ +R CP C A ++ +T
Sbjct: 23 LGCIICQGLL-DWPATLPCGHSFCRHCLEALWGARGARRWACPTCRQGAAQQPQLRKNTL 81
Query: 139 LQDVVDRF 146
LQD+ D++
Sbjct: 82 LQDLADKY 89
>gi|332375530|gb|AEE62906.1| unknown [Dendroctonus ponderosae]
Length = 225
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 16 ITCKICRGYLIDATTVTECLHTFCKSCLVKHLEENNTCPTCKIVIHQSHPLQYISFDRTM 75
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 76 QDIVYKLV 83
>gi|260788618|ref|XP_002589346.1| hypothetical protein BRAFLDRAFT_77799 [Branchiostoma floridae]
gi|229274523|gb|EEN45357.1| hypothetical protein BRAFLDRAFT_77799 [Branchiostoma floridae]
Length = 1004
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +L LG ++GD AV+YF S++ MK + H +++LN +G+
Sbjct: 712 IAQLLSNLGVSWASLGDYRTAVSYFEQSLQ--MKRNIYGESAAHPDTALTLNNMGNAWKE 769
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
D A YY RSL +R+ ++ P DV SL + +G+ AV +
Sbjct: 770 LRDFTKAVKYYERSLQMRQRVYGENTPHP----DVTQSLTNLGAAWSDLGDHKKAVKYHE 825
Query: 349 EAIKRLESL 357
+A++ ++S+
Sbjct: 826 QALQMMQSI 834
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG C+ +GD AV+Y S++ M+ + H ++ SLN + + GD
Sbjct: 584 LNDLGTACQNLGDNRKAVSYHEQSLK--MRQTIYGENKAHPDIAASLNNLANTWSDLGDH 641
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A Y+ +SLN++R + P + SL + + R +G+ AV ++++++
Sbjct: 642 RKAACYHEQSLNMKRTIYGEDTAHPG----IYTSLNNLGNELRDLGDYRNAVSYYEQSMQ 697
Query: 353 RLESL 357
++++
Sbjct: 698 MMQTI 702
>gi|126273453|ref|XP_001378665.1| PREDICTED: polycomb group RING finger protein 6-like [Monodelphis
domestica]
Length = 425
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 209 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 268
Query: 142 VVDRFI 147
+V + +
Sbjct: 269 IVYKLV 274
>gi|348532941|ref|XP_003453964.1| PREDICTED: E3 ubiquitin-protein ligase UHRF2-like [Oreochromis
niloticus]
Length = 793
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISR-FK----DCPLCGADIEK---IEADTTLQDVV 143
C+ CQ L F+ T CSH CK C+ R F+ CP C D+ K + + TLQ ++
Sbjct: 724 CVCCQELAFQ-PITTVCSHNVCKTCLQRSFRAKVYTCPACRHDLGKDYVMTQNKTLQMLL 782
Query: 144 DRFIEGHAR 152
D+F G+++
Sbjct: 783 DQFFPGYSK 791
>gi|440912392|gb|ELR61962.1| Polycomb group RING finger protein 6, partial [Bos grunniens mutus]
Length = 296
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 95 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 154
Query: 142 VVDRFI 147
+V + +
Sbjct: 155 IVYKLV 160
>gi|392354018|ref|XP_224907.6| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 1 [Rattus norvegicus]
Length = 853
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 27/100 (27%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD------TTL 139
C +C L FE TPC H +CK C+ R D CPLC +++ AD L
Sbjct: 557 FECSLCMRLFFE-PVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLL 615
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
+D++ +++ DE E KK+ E+ +
Sbjct: 616 EDLIVKYL----------------PDELSERKKIYDEETA 639
>gi|114668271|ref|XP_511391.2| PREDICTED: E3 ubiquitin-protein ligase RNF135 isoform 4 [Pan
troglodytes]
Length = 214
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI--------SRFKDCPLC---GADIEKIEADTT 138
L C+ICQ LL + PC H +C+ C+ +R CP C A ++ +T
Sbjct: 23 LGCIICQGLL-DWPATLPCGHSFCRHCLEALWGARGARRWACPTCRQGAAQQPQLRKNTL 81
Query: 139 LQDVVDRF 146
LQD+ D++
Sbjct: 82 LQDLADKY 89
>gi|291244940|ref|XP_002742351.1| PREDICTED: deltex 3-like [Saccoglossus kowalevskii]
Length = 1285
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 89 PLSCMICQALLFECSKCTPCSHVYCKACISR-FKD---CPLCG---ADIEKIEADTTLQD 141
PL C IC + + C H +C+ACI R KD CP+CG + + D T+
Sbjct: 1102 PLECPICMERVSDPKMLQDCQHTFCRACIDRALKDKPVCPVCGLIYGTLTGSQPDGTMNT 1161
Query: 142 VVDRF 146
VD+
Sbjct: 1162 TVDKL 1166
>gi|156372722|ref|XP_001629185.1| predicted protein [Nematostella vectensis]
gi|156216179|gb|EDO37122.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS-RFKD-----CPLCGADI------EKIEADT 137
++C +C+ L + + T C H +C++CI RF+D CP C I E + +D
Sbjct: 13 ITCGLCRGYLIKPTTITECLHTFCRSCIILRFQDGEVNLCPTCNILIHETNPLEMLRSDK 72
Query: 138 TLQDVVDRFIEG 149
TL+D++ + + G
Sbjct: 73 TLEDIIYKLVPG 84
>gi|395825372|ref|XP_003785910.1| PREDICTED: E3 ubiquitin-protein ligase RNF180 [Otolemur garnettii]
Length = 594
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 434 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 493
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 494 TFFTKEYLKIKQSFHKS 510
>gi|260788858|ref|XP_002589466.1| hypothetical protein BRAFLDRAFT_80110 [Branchiostoma floridae]
gi|229274643|gb|EEN45477.1| hypothetical protein BRAFLDRAFT_80110 [Branchiostoma floridae]
Length = 1161
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYYGGDL 292
L +G +GD A YFA S+E + D+ HT ++ LN +G GD
Sbjct: 727 LSSMGTAWYKLGDNKEARPYFAQSLEMYRSVHGDN--TAHTDIARVLNDLGITSNNVGDH 784
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SY+ ++L +RR ++ LD+A SL + +G+ + A+ +++++
Sbjct: 785 RKAVSYHQQALQMRRSI----HGEGTEHLDIAASLLNLGAAWAGLGDHEKAISHLEQSLQ 840
Query: 353 RLESL 357
S+
Sbjct: 841 MHRSI 845
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
LG +GD AV ++ +++ + +D H ++ SLN +G + GD + A
Sbjct: 906 LGQSWSNLGDHRKAVGFYKQALQMRRGVYGEDAP--HPDIASSLNSLGAAWHDLGDYRKA 963
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
YY +SL +RR+ + + D+A+SL+ + V +G+ A+ ++A++
Sbjct: 964 IRYYEQSLQMRRNIYGK----DTAHTDIAISLSNLGIVWSDLGDHRKAIGYHEQALQMRR 1019
Query: 356 SL 357
SL
Sbjct: 1020 SL 1021
>gi|355705097|gb|EHH31022.1| RING finger protein 127 [Macaca mulatta]
Length = 623
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 323 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 381
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 382 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 412
>gi|427792783|gb|JAA61843.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 2166
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIE------ADTTL 139
L+C +C+ L + C H +C++CI + + CP+C + KI D TL
Sbjct: 9 LTCKLCKGYLVDAMTLVKCLHSFCRSCILKHLETGHACPVCDLRLSKINMESHLIKDDTL 68
Query: 140 QDVVDRFIEG 149
Q+VV + + G
Sbjct: 69 QNVVYKAVPG 78
>gi|348534951|ref|XP_003454965.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Oreochromis niloticus]
Length = 806
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 17/181 (9%)
Query: 4 VCPFAKARPDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGDKAK 63
+C + + D + PGE S K A+ + P RK + +
Sbjct: 401 LCALSAGKSDPS----PGEGSTKSLADVLAALPAPPGGLKRKHKSDGPSATFSPPSKLLR 456
Query: 64 SDSMDSASIPPKCPF-GYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD 122
+D ++ C A+ G L C +C L +E TPC H +C C+ R D
Sbjct: 457 ADEAETCQTTAACGGRSVPAELLDSGDLECSLCMRLFYE-PVATPCGHTFCLKCLERCLD 515
Query: 123 ----CPLCGADIEKIEAD------TTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKK 172
CPLC ++ + A +++V+ R++ G +R + ++ ++ + N++
Sbjct: 516 HNPNCPLCKENLSEYLASRGYNKTLLMEEVLQRYL-GDELAERKKIHEEEMKELSNLNQE 574
Query: 173 V 173
V
Sbjct: 575 V 575
>gi|410897557|ref|XP_003962265.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Takifugu rubripes]
Length = 765
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 60/160 (37%), Gaps = 30/160 (18%)
Query: 15 ASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDSASIPP 74
A P PG KY + P + P P H D+ S+ A++
Sbjct: 413 ALPLPPGGVKRKYSGDGPSATLNP--------------PSKVHKSDEM--SSVQKATV-- 454
Query: 75 KCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI 130
C L C +C L +E TPC H +C C+ R D CPLC ++
Sbjct: 455 GCTRVVPTNLLDSADLECSLCMRLFYE-PVATPCGHTFCLKCLERCMDHNPNCPLCKENL 513
Query: 131 EKIEA------DTTLQDVVDRFI-EGHARIKRSHTNSDKE 163
+ A +++V+ RF+ E A K+ H KE
Sbjct: 514 SEYLATRGYSKTLLMEEVLQRFLAEELAERKKIHEEEMKE 553
>gi|301756214|ref|XP_002913942.1| PREDICTED: polycomb group RING finger protein 6-like, partial
[Ailuropoda melanoleuca]
Length = 297
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 81 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 140
Query: 142 VVDRFI 147
+V + +
Sbjct: 141 IVYKLV 146
>gi|444709695|gb|ELW50696.1| E3 ubiquitin-protein ligase RNF180 [Tupaia chinensis]
Length = 547
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 420 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 479
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 480 TFFTKEYLKIKQSFQKS 496
>gi|354506347|ref|XP_003515225.1| PREDICTED: polycomb group RING finger protein 6-like [Cricetulus
griseus]
Length = 260
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C IC+ L + + T C H +CK+CI R CP C + + I D L
Sbjct: 42 IMCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCSIVVHQTQPLYNIRLDRQL 101
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 102 QDIVYKLV 109
>gi|355757648|gb|EHH61173.1| RING finger protein 127 [Macaca fascicularis]
Length = 664
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 364 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 422
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 423 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 453
>gi|71043373|gb|AAZ20648.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 757
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 263 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 320
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 321 IVYKLVPG 328
>gi|410948719|ref|XP_003981078.1| PREDICTED: E3 ubiquitin-protein ligase RNF180 [Felis catus]
Length = 574
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 414 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 473
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 474 TFFTKEYLKIKQSFQKS 490
>gi|321476884|gb|EFX87844.1| hypothetical protein DAPPUDRAFT_37015 [Daphnia pulex]
Length = 89
Score = 42.0 bits (97), Expect = 0.46, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD-----CPLCGADIEK 132
L+C ICQ L + + T C H +CK+C+ + + CP CG +++
Sbjct: 1 LTCSICQGYLIDATTITECMHTFCKSCLLQRVESGRTFCPRCGVQLQR 48
>gi|403279122|ref|XP_003931115.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Saimiri boliviensis boliviensis]
Length = 762
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 462 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 520
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 521 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 551
>gi|260830810|ref|XP_002610353.1| hypothetical protein BRAFLDRAFT_72446 [Branchiostoma floridae]
gi|229295718|gb|EEN66363.1| hypothetical protein BRAFLDRAFT_72446 [Branchiostoma floridae]
Length = 1305
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDLQAA 295
LG +G+ A+ Y+ S++ MK + +H ++ SLN +G Y GD + A
Sbjct: 662 LGTAWSELGEFRKAIGYWERSLQ--MKRNIYGKITVHPGIAYSLNNLGTAWYDLGDYRKA 719
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
YY +SL +++ + +++ P D+AVSL + +G+ A ++++++
Sbjct: 720 IRYYEQSLQMKQSILGENTSHP----DIAVSLNNLGTAWIRLGDYGKATSYYEQSLQ 772
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 200 ESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVE 259
+S +++L +C E NT+ S + + L LGD + +GD A+ Y S++
Sbjct: 945 QSLQTQLIICRE----------NTAH--SDIFSTLNNLGDAWKELGDYSRAIGYCEQSLQ 992
Query: 260 FLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQ 319
+M+ D L+ SLN + + GD + A SY +SL +R+ ++ PS
Sbjct: 993 -MMRSIYGDSTAHPDLADSLNNLATVYIGLGDYRNAVSYCEQSLQMRKSICGENTAHPS- 1050
Query: 320 VLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESL 357
+A +L + G+ AV FQ+++ S+
Sbjct: 1051 ---IANTLNNLGAAFSEFGDYRKAVSYFQQSLHMNRSI 1085
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYYGGDLQAA 295
LG+ + GD AV Y S++ M+ + H+ ++ SL +G + GD + A
Sbjct: 1102 LGNNYKEYGDIRNAVCYHEQSLQ--MRWLIYGENSAHSDIAASLTSLGGVCRELGDYRKA 1159
Query: 296 RSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLE 355
SYY SL VRR +++ P D+A+SL + V +G+ + +++++ ++
Sbjct: 1160 ASYYDDSLQVRRSIYGKNTAHP----DIAMSLNNLGGVCCELGDYKKGIGYCEQSLQMMQ 1215
Query: 356 SL 357
S+
Sbjct: 1216 SI 1217
>gi|333978551|ref|YP_004516496.1| phage tail tape measure protein, TP901 family [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822032|gb|AEG14695.1| phage tail tape measure protein, TP901 family [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 2250
Score = 42.0 bits (97), Expect = 0.47, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 243 AMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRS 302
A+ A A++ + SVE L K + LE+ H S L +G LQA +YY R+
Sbjct: 926 AIKSASASLNTYGQSVEAL-KAQLSLLEVEHVRS--LASLGAFATSLQKLQADLNYYQRA 982
Query: 303 LNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLESLTLKPE 362
L V+RD V S + ++ + SL + A+ RS+ E V+ Q ++R + T
Sbjct: 983 LEVQRDLV---SALQARYEALKASLGEAAEATRSVYAEWVSAQAAQVNLERAIART---- 1035
Query: 363 EAGLEQRRLSVLEFLNNQLSE 383
A ++Q++ ++ L NQ+++
Sbjct: 1036 NASIQQQQRE-MQALTNQVAD 1055
>gi|260787473|ref|XP_002588777.1| hypothetical protein BRAFLDRAFT_89794 [Branchiostoma floridae]
gi|229273947|gb|EEN44788.1| hypothetical protein BRAFLDRAFT_89794 [Branchiostoma floridae]
Length = 1491
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LG C A+GD AV Y +S++ + ++ T + N + DL G L+
Sbjct: 1264 LHNLGRSCIALGDYKKAVGYLEESLKICQSVFGENT----TNCILGNALNDLAVSWGRLE 1319
Query: 294 ---AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEA 350
A SY+ ++L +R+ A HS P D+A SL + ++G A++ ++EA
Sbjct: 1320 EHSKAFSYHTQALRMRKAAHGEHSPHP----DIADSLMNIGISCSNLGEHRKAMNYYEEA 1375
Query: 351 IKRLE 355
+K ++
Sbjct: 1376 LKMMK 1380
>gi|17532249|ref|NP_495279.1| Protein C32D5.11 [Caenorhabditis elegans]
gi|351058577|emb|CCD66039.1| Protein C32D5.11 [Caenorhabditis elegans]
Length = 770
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 66 SMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLF--ECSKCTPCSHVYCKACISRF--- 120
+M + + P P + + + L C IC + F EC + C+H +C +CIS +
Sbjct: 42 TMGDSGVEPVIPSPSTSSNNPVEELQCTICLSTRFSQEC-RIEGCNHSFCFSCISEWVCQ 100
Query: 121 ---KDCPLCGADIEKIEADTTLQDV 142
CP+C D++K+ D + Q +
Sbjct: 101 SLRPSCPMCRKDVDKVSYDFSEQKL 125
>gi|432104596|gb|ELK31208.1| E3 ubiquitin-protein ligase RNF180 [Myotis davidii]
Length = 577
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 416 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 475
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 476 TFFTKEYLKIKQSFQKS 492
>gi|310791610|gb|EFQ27137.1| hypothetical protein GLRG_02308 [Glomerella graminicola M1.001]
Length = 931
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 21/108 (19%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI---------------------SRFKDCPLCGA 128
L+C IC LL++ C H YC AC+ + CP C A
Sbjct: 14 LTCSICTELLYQPLTLLDCLHTYCGACLKDWFSFQANQAENSPNPPVAGTNIFTCPSCRA 73
Query: 129 DIEKIEADTTLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYE 176
+ + T+ ++D I + KRS T++D+ + +V+ E
Sbjct: 74 PVRDTRHNATVATLLDMLITANPDKKRSETDTDEMNKKYKPGDQVLPE 121
>gi|260826355|ref|XP_002608131.1| hypothetical protein BRAFLDRAFT_91390 [Branchiostoma floridae]
gi|229293481|gb|EEN64141.1| hypothetical protein BRAFLDRAFT_91390 [Branchiostoma floridae]
Length = 534
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LG+ C +GD A++Y+ +++ + + DD + ++LN +G + GD + A
Sbjct: 367 LGEACSNLGDYKKAISYYEQALQMMRAIYGDD-TAHQDIVITLNNLGIVWGNLGDHRKAE 425
Query: 297 SYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIKRLES 356
SYY +SL + +++ P+ +A L + V +G+ AV ++++++ S
Sbjct: 426 SYYEQSLQMVISIYGKNTAHPA----IAELLGNLGIVWFGLGDHRKAVSYYEQSLQMRRS 481
Query: 357 L 357
+
Sbjct: 482 I 482
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +LG LG +GD AV+Y+ S++ M+ + + H +++SLN +G+
Sbjct: 448 IAELLGNLGIVWFGLGDHRKAVSYYEQSLQ--MRRSIYGEDTAHPDIALSLNNLGNAWRD 505
Query: 289 GGDLQAARSYYVRSLNVRR 307
GD + A SYY +SL +RR
Sbjct: 506 LGDHRTAVSYYEQSLQMRR 524
>gi|428313545|ref|YP_007124522.1| hypothetical protein Mic7113_5479 [Microcoleus sp. PCC 7113]
gi|428255157|gb|AFZ21116.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 360
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 231 GAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGG 290
G VLG+LG+C R +GDA A+ S+ + +L E+ V+LN +G G
Sbjct: 128 GQVLGILGNCYRHIGDAAKAIEQGQQSLTIMRELEDRAGEV-----VALNNLGLAYKAMG 182
Query: 291 DLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEA 350
DL A +Y +SL+V Q L L + R++GN A+ F A
Sbjct: 183 DLSTAIAYQQKSLSV------------VQTLG---DLQATEQILRNLGNAFYAMGDFARA 227
Query: 351 IKRLES-LTLKPE 362
I+ E LT+ E
Sbjct: 228 IQYYEQRLTIARE 240
>gi|403279120|ref|XP_003931114.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Saimiri boliviensis boliviensis]
Length = 721
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 421 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 479
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 480 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 510
>gi|66815487|ref|XP_641760.1| hypothetical protein DDB_G0279263 [Dictyostelium discoideum AX4]
gi|60469793|gb|EAL67780.1| hypothetical protein DDB_G0279263 [Dictyostelium discoideum AX4]
Length = 742
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFK----DCPLCGADIEKIEADTTLQDVVDR 145
L C ICQ ++++C PC H +C C ++ DCP C ++ + + + ++++
Sbjct: 402 LICGICQDIIYKCLTLIPCMHNFCVCCYGDWRANSMDCPQCRQSVKSAQKNHAINNLIEL 461
Query: 146 FIE 148
+++
Sbjct: 462 YLK 464
>gi|374856343|dbj|BAL59197.1| non-specific serine/threonine protein kinase [uncultured candidate
division OP1 bacterium]
Length = 704
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ + L LG + GD D AVA F +S+ L ++ +L+ +G + Y
Sbjct: 460 IASALSALGGLAQIEGDYDRAVALFEESLALQRTLGYQA-----GIAYALSNLGSVAYAR 514
Query: 290 GDLQAARSYYVRSLNVRRD 308
GD + ARS+Y SL +RR+
Sbjct: 515 GDYELARSHYEESLQIRRE 533
>gi|332708575|ref|ZP_08428549.1| hypothetical protein LYNGBM3L_27120 [Moorea producens 3L]
gi|332352672|gb|EGJ32238.1| hypothetical protein LYNGBM3L_27120 [Moorea producens 3L]
Length = 940
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 142 VVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAM-RAFRAQNVE 200
VV RF+ A + +T S ++E + ++ D LV+Q + + +R++ E
Sbjct: 23 VVARFLTLPALAQEQNTVSPEQEGTIAPSDAIVQVDSKQAEADKLVEQGLSQLYRSEFRE 82
Query: 201 SAKSRLSLCTEDIRDQI-ERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVE 259
+ +S I QI R G + L S LG +G+ + A+ Y S+
Sbjct: 83 ALQSWQQALV--IYKQIGNREGEAASLIS--------LGLTYLGLGEYNKAIDYLQKSLA 132
Query: 260 FLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQ 319
++ E ++SL +GD G+ + A YY +SL + ++ R
Sbjct: 133 IAKEIGDRKGE-----AISLTNLGDAYESLGNYKKAIDYYQQSLAIAKEIGDRKGE---- 183
Query: 320 VLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
A+SL + D S+GN A+D +Q+++
Sbjct: 184 ----AISLTNLGDAYESLGNYKKAIDYYQQSL 211
>gi|75072991|sp|Q8HXH0.1|LONF3_MACFA RecName: Full=LON peptidase N-terminal domain and RING finger
protein 3
gi|26449305|dbj|BAC41780.1| hypothetical protein [Macaca fascicularis]
Length = 718
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 507
>gi|355779521|gb|EHH63997.1| RING finger protein 191, partial [Macaca fascicularis]
Length = 534
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD 136
+ C +C L FE TPC H++CK C+ R D CPLC +++ AD
Sbjct: 235 VSDFECSLCMRLFFE-PVTTPCGHLFCKNCLERCLDHAPHCPLCKESLKEYLAD 287
>gi|297710864|ref|XP_002832080.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Pongo abelii]
Length = 759
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLVSRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|119570032|gb|EAW49647.1| polycomb group ring finger 6, isoform CRA_a [Homo sapiens]
Length = 250
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 34 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 93
Query: 142 VVDRFI 147
+V + +
Sbjct: 94 IVYKLV 99
>gi|119570034|gb|EAW49649.1| polycomb group ring finger 6, isoform CRA_c [Homo sapiens]
Length = 118
Score = 42.0 bits (97), Expect = 0.50, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 34 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 93
Query: 142 VVDRFI 147
+V + +
Sbjct: 94 IVYKLV 99
>gi|158261419|dbj|BAF82887.1| unnamed protein product [Homo sapiens]
Length = 718
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 507
>gi|156372728|ref|XP_001629188.1| predicted protein [Nematostella vectensis]
gi|156216182|gb|EDO37125.1| predicted protein [Nematostella vectensis]
Length = 92
Score = 42.0 bits (97), Expect = 0.50, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIEK------IEADT 137
++C +C+ L + + T C H +CK+CI S CP C I + + +D
Sbjct: 6 ITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSCNTVIHETNPFDLLRSDQ 65
Query: 138 TLQDVVDRFIEG 149
TL+D+V + + G
Sbjct: 66 TLEDIVFKLVPG 77
>gi|149922550|ref|ZP_01910980.1| serine/threonine kinase family protein [Plesiocystis pacifica
SIR-1]
gi|149816577|gb|EDM76072.1| serine/threonine kinase family protein [Plesiocystis pacifica
SIR-1]
Length = 1005
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 229 QLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKY 287
++ A L LG RA GD D A+AY+ S + + D L H ++ LN IG L Y
Sbjct: 691 RVAAALNNLGSVARAEGDIDEALAYYQRS----LTMREDLLGPTHPQVATPLNNIGTLAY 746
Query: 288 YGGDLQAARSYYVRSLNVR 306
GD + A + Y R+ +R
Sbjct: 747 GRGDHEQALAAYERAYAIR 765
>gi|242033011|ref|XP_002463900.1| hypothetical protein SORBIDRAFT_01g008520 [Sorghum bicolor]
gi|241917754|gb|EER90898.1| hypothetical protein SORBIDRAFT_01g008520 [Sorghum bicolor]
Length = 336
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGADI-----EKIEADTT 138
++C +C+ LL + T C H +C+ CI + D CP+C D+ EK+ D
Sbjct: 19 MTCPLCRGLLRAATAITLCLHTFCRECIMEKINDEEVDCCPVCDIDLGCDPEEKLRPDHN 78
Query: 139 LQDVVDRF 146
LQD+ ++
Sbjct: 79 LQDIRNKV 86
>gi|148686535|gb|EDL18482.1| mCG22907, isoform CRA_c [Mus musculus]
Length = 665
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 505 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFLQTELNNATK 564
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 565 TFFTKEYLKIKQSFQKS 581
>gi|148686534|gb|EDL18481.1| mCG22907, isoform CRA_b [Mus musculus]
Length = 648
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 488 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFLQTELNNATK 547
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 548 TFFTKEYLKIKQSFQKS 564
>gi|21425584|emb|CAD33944.1| BMI1-like protein [Mus musculus]
gi|187955404|gb|AAI47683.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
gi|187956799|gb|AAI47696.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
Length = 194
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
+SC IC+ L + + T C H +CK+CI + + CP C + + + D L
Sbjct: 83 ISCFICKGYLIDAATITECLHSFCKSCIVKHFEHSNRCPKCNLIVHQAKPHKNLRMDPQL 142
Query: 140 QDVVDRFIEG 149
Q +V + + G
Sbjct: 143 QSIVYKLVAG 152
>gi|402911226|ref|XP_003918238.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Papio anubis]
Length = 718
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 507
>gi|114689958|ref|XP_001135253.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Pan troglodytes]
Length = 757
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|114689960|ref|XP_529131.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Pan troglodytes]
Length = 716
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 507
>gi|16124665|ref|NP_419229.1| hypothetical protein CC_0410 [Caulobacter crescentus CB15]
gi|221233354|ref|YP_002515790.1| hypothetical protein CCNA_00415 [Caulobacter crescentus NA1000]
gi|13421571|gb|AAK22397.1| TPR domain protein [Caulobacter crescentus CB15]
gi|220962526|gb|ACL93882.1| hypothetical protein CCNA_00415 [Caulobacter crescentus NA1000]
Length = 336
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKL----PMD---DLEIIHTLSVSLNKIGDLKYYG 289
LGD RA G D A + +V + ++ P D DL L+ +L+ +GD+
Sbjct: 186 LGDFARAQGQLDEAGEAYETAVAYARQVRQTRPTDASTDL-----LAGALSGVGDVAEAE 240
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
G L AA S + +L +RR R +N P+ ++V+L ++AD+ G+ A+D ++E
Sbjct: 241 GRLDAALSAFEEALALRRSRGAREANDPNAQRALSVNLERLADLREDRGHRMRALDLYRE 300
Query: 350 A 350
+
Sbjct: 301 S 301
>gi|37622896|ref|NP_079054.3| LON peptidase N-terminal domain and RING finger protein 3 isoform 2
[Homo sapiens]
gi|73695332|gb|AAI03492.1| LON peptidase N-terminal domain and ring finger 3 [Homo sapiens]
gi|119610291|gb|EAW89885.1| LON peptidase N-terminal domain and ring finger 3, isoform CRA_a
[Homo sapiens]
Length = 718
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 507
>gi|397482967|ref|XP_003812681.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Pan paniscus]
Length = 716
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 507
>gi|307182744|gb|EFN69868.1| Polycomb group RING finger protein 3 [Camponotus floridanus]
Length = 226
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 14 ITCKICRGYLIDATTVTECLHTFCKSCLVKHLEEKHTCPTCQIVIHQSHPLQYISFDRTM 73
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 74 QDIVYKLV 81
>gi|195012111|ref|XP_001983480.1| GH15918 [Drosophila grimshawi]
gi|193896962|gb|EDV95828.1| GH15918 [Drosophila grimshawi]
Length = 222
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 87 IGP-LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEA 135
I P ++C IC + + T C H +CK+C+ + K CP C + I + I
Sbjct: 10 INPHITCKICGGYFIDATTVTECLHTFCKSCLVKHLEEKKTCPTCDSIIHQSHPLQYISF 69
Query: 136 DTTLQDVVDRFI 147
D T+QD+V + +
Sbjct: 70 DRTMQDIVYKLV 81
>gi|73949607|ref|XP_544359.2| PREDICTED: E3 ubiquitin-protein ligase RNF180 isoform 1 [Canis
lupus familiaris]
Length = 592
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGA 184
F + + +IK+S S + +K + R A
Sbjct: 492 TFFPKEYLKIKQSFQKSSSAKWPLPSCRKAFHLFGGFHRHA 532
>gi|403333854|gb|EJY66054.1| hypothetical protein OXYTRI_13781 [Oxytricha trifallax]
Length = 426
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKAC----ISRFKDCPLCGADIEKIEADTTLQDVVDR 145
C IC + + PC H +C C +SR KDCP C + +++ ++ + +++
Sbjct: 201 FDCGICYMTMHQAVTLMPCLHTFCGGCFSDWLSRQKDCPSCRDSVVEVKKNSLVNCLIEN 260
Query: 146 FIEGHARIKRSHTNSDKEEDEAGEN 170
++ + + KRS D+ +D G+N
Sbjct: 261 YLILNPQQKRSE---DEIKDLEGKN 282
>gi|307193493|gb|EFN76270.1| Polycomb group RING finger protein 3 [Harpegnathos saltator]
Length = 226
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 14 ITCKICRGYLIDATTVTECLHTFCKSCLVKHLEEKHTCPTCQIVIHQSHPLQYISFDRTM 73
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 74 QDIVYKLV 81
>gi|297710866|ref|XP_002832081.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Pongo abelii]
Length = 718
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLVSRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 507
>gi|449483669|ref|XP_002194059.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Taeniopygia guttata]
Length = 651
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 58 DGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACI 117
DGD ++ D++S P DA F+ C +C L +E TPC H +C C+
Sbjct: 331 DGDVLPENTTDTSSEIPTTLV--DASDFE-----CSLCMRLFYE-PVTTPCGHTFCLKCL 382
Query: 118 SRFKD----CPLCGADIEKIEADTTLQDVV 143
R D CPLC + + A T + V
Sbjct: 383 ERCLDHNPLCPLCKEKLSEFLASRTYKKTV 412
>gi|402911228|ref|XP_003918239.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Papio anubis]
Length = 759
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|397482969|ref|XP_003812682.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Pan paniscus]
Length = 757
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|337264843|ref|YP_004608898.1| peptidase C14 caspase catalytic subunit p20 [Mesorhizobium
opportunistum WSM2075]
gi|336025153|gb|AEH84804.1| peptidase C14 caspase catalytic subunit p20 [Mesorhizobium
opportunistum WSM2075]
Length = 876
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPM---DDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD RA G D A F +S+ + L DD E ++VS +IGD+ GD
Sbjct: 586 IGDLARAAGQLDDAQTAFEESLRIRLVLTGNKPDDPERQRAVAVSQERIGDVLRQRGDAA 645
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
A Y S + D V+R N D+++S AK+ + N A+ +++A+
Sbjct: 646 GALVAYSNSQAIAEDLVRRDPNDTDLKRDLSISYAKIGNALNDQENWPAALASYRQAL 703
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 237 LGDCCRAMGDADAAVAYFADS---VEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD R GDA A+ +++S E L++ +D ++ LS+S KIG+ +
Sbjct: 634 IGDVLRQRGDAAGALVAYSNSQAIAEDLVRRDPNDTDLKRDLSISYAKIGNALNDQENWP 693
Query: 294 AARSYYVRSLNVRRD-AVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
AA + Y ++L V RD A +N Q D++V L KVA V + GN A+ +Q+++
Sbjct: 694 AALASYRQALAVARDLAADDPANTEWQR-DLSVCLEKVAGVLDAQGNTGDALQNYQDSLA 752
Query: 353 RLESLT-LKPEEAGLEQRRLSV 373
+ L L P + QR LS+
Sbjct: 753 IADRLAKLDPGNSDW-QRDLSI 773
>gi|260817000|ref|XP_002603375.1| hypothetical protein BRAFLDRAFT_80368 [Branchiostoma floridae]
gi|229288694|gb|EEN59386.1| hypothetical protein BRAFLDRAFT_80368 [Branchiostoma floridae]
Length = 871
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ + L LG+ +G+ AV+Y S++ + + + H ++ SLN +G
Sbjct: 748 IASSLNNLGNAWIFLGNCKKAVSYHEQSLQMMRTIYGKN--TAHPDIASSLNNLGSAWGI 805
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY +SL +RR ++ P D+A SL + V R +G+ A +
Sbjct: 806 LGDYKKAVSYYEQSLQIRRTIYGENTAHP----DIASSLNILGIVWRLLGDHQKAASYHE 861
Query: 349 EAIK 352
++++
Sbjct: 862 QSLQ 865
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 208 LCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMD 267
+C E++ + + + S + L LG +GD AV+Y S++ + + +
Sbjct: 394 VCLEELLQNYQTRFGEASMHSDIVQTLHKLGGVYENIGDHKKAVSYHEQSLQMIRTIYGE 453
Query: 268 DLEIIH-TLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVS 326
+ H ++ SLN +G+ + GD + A SY+ +SL + + + N +D+A S
Sbjct: 454 N--TAHPDIASSLNNLGNAWMHLGDHKNAVSYHEQSLQM--EWIIHGENTAH--IDIASS 507
Query: 327 LAKVADVDRSIGNEDVAVDGFQEAIK 352
L + + + +G+ AV +++++
Sbjct: 508 LNNLGNAWKDLGDHKKAVSYHEQSLQ 533
>gi|195027952|ref|XP_001986846.1| GH21599 [Drosophila grimshawi]
gi|193902846|gb|EDW01713.1| GH21599 [Drosophila grimshawi]
Length = 1357
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 92 CMICQALLFECSKCTPCSHVYCKAC----ISRFKDCPLCGADIE----KIEADTTLQDVV 143
C +CQ L + C H +C C + + + CP C I I++DTTLQ +V
Sbjct: 18 CHLCQGYLINATTIVECLHSFCHNCLINHLRKERYCPRCEMVINNAKPNIKSDTTLQAIV 77
Query: 144 DRFIEG 149
+ + G
Sbjct: 78 YKLVPG 83
>gi|73747840|ref|NP_001027026.1| LON peptidase N-terminal domain and RING finger protein 3 isoform 1
[Homo sapiens]
gi|121949074|sp|Q496Y0.1|LONF3_HUMAN RecName: Full=LON peptidase N-terminal domain and RING finger
protein 3; AltName: Full=RING finger protein 127
gi|71121157|gb|AAH99847.1| LON peptidase N-terminal domain and ring finger 3 [Homo sapiens]
gi|71680341|gb|AAI00672.1| LON peptidase N-terminal domain and ring finger 3 [Homo sapiens]
gi|119610294|gb|EAW89888.1| LON peptidase N-terminal domain and ring finger 3, isoform CRA_d
[Homo sapiens]
Length = 759
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|344281401|ref|XP_003412468.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Loxodonta africana]
Length = 556
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD------ 136
+ C +C L FE TPC H +CK C+ R D CPLC +++ AD
Sbjct: 257 VSDFECSLCMRLFFE-PVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRKYCVT 315
Query: 137 TTLQDVVDRFIEG 149
L++++ +++ G
Sbjct: 316 QLLEELIVKYLPG 328
>gi|323303027|gb|EGA56830.1| Psh1p [Saccharomyces cerevisiae FostersB]
Length = 406
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRF------KD--CPLCGADIEKIEA-DT 137
I L C IC +F TPC H YC C++ + K+ CP C +DI I A +T
Sbjct: 25 IESLVCSICHDYMF-VPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRSDITTIPALNT 83
Query: 138 TLQDVVDRFIE-----GHARIKRSHTNSDKEEDEAGENKK 172
TLQ + +E K+ T KEE++ +K+
Sbjct: 84 TLQQYLSFILEKLRDQNDESFKKLLTTKTKEENDYKNDKE 123
>gi|332022202|gb|EGI62517.1| Polycomb group RING finger protein 3 [Acromyrmex echinatior]
Length = 226
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 14 ITCKICRGYLIDATTVTECLHTFCKSCLVKHLEEKHTCPTCQIVIHQSHPLQYISFDRTM 73
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 74 QDIVYKLV 81
>gi|320037692|gb|EFW19629.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Coccidioides posadasii str. Silveira]
Length = 411
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIE--KIEADTTLQDVV 143
L C +C+ L F+ T C H +C CI R CP C AD + K+ + + +VV
Sbjct: 28 LRCQVCKDL-FKNPVTTSCCHTFCSICIRRCLSADGKCPTCRADDQAVKLRQNWAVDEVV 86
Query: 144 DRFIE------GHARIKRSHTNSDKEEDEAGENKKV--IYEDVSMERG 183
D F + G AR + NSD E + +++ + + S E G
Sbjct: 87 DSFRQVRGDLLGFARNLSAGPNSDSREARIPKKRRIEEMQDATSQENG 134
>gi|426397207|ref|XP_004064815.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Gorilla gorilla gorilla]
Length = 759
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|363733701|ref|XP_420695.3| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 1 [Gallus gallus]
Length = 721
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 21/149 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIE------KIEADTTL 139
C +C L FE TPC H +CK C+ R D CPLC ++ K L
Sbjct: 425 FECSLCMRLFFE-PVTTPCGHTFCKGCLERCLDHAPQCPLCKESLKEYLASRKYSITELL 483
Query: 140 QDVVDRFI--EGHARIKRSHTNSDKEEDEAGENKKVI-----YEDVSMERGAFLVQQAMR 192
++++ +++ E + R KR H E +N + Y V F + R
Sbjct: 484 EELIMKYLSDELYER-KRIHAEETAEHSNLTKNVPMFVCTMAYPTVPCPLHVF--EPRYR 540
Query: 193 AFRAQNVESAKSRLSLCTEDIRDQIERMG 221
+++E+ + +C D ++ G
Sbjct: 541 LMIRRSMETGTKQFGMCISDSQNGFADYG 569
>gi|417403106|gb|JAA48374.1| Putative e3 ubiquitin-protein ligase [Desmodus rotundus]
Length = 592
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 431 CAVCLDVYFNPYMCYPCRHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 490
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 491 TFFTKEYLKIKQSFQKS 507
>gi|291242845|ref|XP_002741316.1| PREDICTED: ring finger protein 8-like [Saccoglossus kowalevskii]
Length = 606
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFK------DCPLCGADIEKIEADTTLQDVV 143
L C +C L E + + CSH +C CI+ + DCP+C A + L +
Sbjct: 408 LQCSLCYELFVEATTLS-CSHSFCNWCITEWLVTKKHCDCPVCRAKVTSRNKSIVLDSYI 466
Query: 144 DRFIEG 149
D+ +E
Sbjct: 467 DKMVEN 472
>gi|303314713|ref|XP_003067365.1| postreplication repair protein, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240107033|gb|EER25220.1| postreplication repair protein, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 405
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIE--KIEADTTLQDVV 143
L C +C+ L F+ T C H +C CI R CP C AD + K+ + + +VV
Sbjct: 28 LRCQVCKDL-FKNPVTTSCCHTFCSICIRRCLSADGKCPTCRADDQAVKLRQNWAVDEVV 86
Query: 144 DRFIE------GHARIKRSHTNSDKEEDEAGENKKV--IYEDVSMERG 183
D F + G AR + NSD E + +++ + + S E G
Sbjct: 87 DSFRQVRGDLLGFARNLSAGPNSDSREARIPKKRRIEEMQDATSQENG 134
>gi|224049868|ref|XP_002192219.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Taeniopygia guttata]
Length = 824
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 21/149 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIE------KIEADTTL 139
C +C L FE TPC H +CK C+ R D CPLC ++ K L
Sbjct: 529 FECSLCMRLFFE-PVTTPCGHTFCKGCLERCLDHAPQCPLCKESLKEYLASRKYSITELL 587
Query: 140 QDVVDRFI--EGHARIKRSHTNSDKEEDEAGENKKVI-----YEDVSMERGAFLVQQAMR 192
++++ +++ E R KR H E +N + Y V F + R
Sbjct: 588 EELIMKYLSDELFER-KRIHAEETAEHSNLTKNVPMFVCTMAYPTVPCPLHVF--EPRYR 644
Query: 193 AFRAQNVESAKSRLSLCTEDIRDQIERMG 221
+++E+ + +C D ++ G
Sbjct: 645 LMIRRSMETGTKQFGMCISDSQNGFADYG 673
>gi|349581115|dbj|GAA26273.1| K7_Psh1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 406
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRF------KD--CPLCGADIEKIEA-DT 137
I L C IC +F TPC H YC C++ + K+ CP C +DI I A +T
Sbjct: 25 IESLVCSICHDYMF-VPMMTPCGHNYCYGCLNTWFASNTQKEFACPQCRSDITTIPALNT 83
Query: 138 TLQDVVDRFIE-----GHARIKRSHTNSDKEEDEAGENKK 172
TLQ + +E K+ T KEE++ +K+
Sbjct: 84 TLQQYLSFILEKLRDQNDESFKKLLTTKTKEENDYKNDKE 123
>gi|323335658|gb|EGA76941.1| Psh1p [Saccharomyces cerevisiae Vin13]
Length = 406
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRF------KD--CPLCGADIEKIEA-DT 137
I L C IC +F TPC H YC C++ + K+ CP C +DI I A +T
Sbjct: 25 IESLVCSICHDYMF-VPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRSDITTIPALNT 83
Query: 138 TLQDVVDRFIE-----GHARIKRSHTNSDKEEDEAGENKK 172
TLQ + +E K+ T KEE++ +K+
Sbjct: 84 TLQQYLSFILEKLRDQNDESFKKLLTTKTKEENDYKNDKE 123
>gi|451856092|gb|EMD69383.1| hypothetical protein COCSADRAFT_76992 [Cochliobolus sativus ND90Pr]
Length = 472
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLC--GADIEKIEADTTLQDVV 143
L C +C+ + T CSH +C CI R CP C G +K+ + +++VV
Sbjct: 28 LRCEVCKEF-YHNPVITSCSHTFCSICIRRCIASDGKCPSCKTGCSSDKLAPNIAVREVV 86
Query: 144 DRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQN 198
RF E + EE + G KK ED +E + R R+++
Sbjct: 87 MRFQEARPKALELARADKDEEVKGGRRKKRKIEDTDIEEDDNVRHTRSRQTRSKS 141
>gi|391338049|ref|XP_003743374.1| PREDICTED: E3 ubiquitin-protein ligase CBL-B-like [Metaseiulus
occidentalis]
Length = 797
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 20/80 (25%)
Query: 104 KCTPCSHVYCKACISRFKD-----CPLCGADIEKIEADTTLQDVVDRFIEGHARIKRS-- 156
+ PC H+ C AC++ ++D CP C A+I+ E Q VVD F EG ++RS
Sbjct: 375 RIEPCGHLLCTACLTSWQDSEGVGCPFCRAEIKGTE-----QVVVDPF-EGKT-LRRSEV 427
Query: 157 ----HTNS--DKEEDEAGEN 170
H NS D E+DE E+
Sbjct: 428 RETQHNNSLVDLEDDEPFED 447
>gi|260808181|ref|XP_002598886.1| hypothetical protein BRAFLDRAFT_90088 [Branchiostoma floridae]
gi|229284161|gb|EEN54898.1| hypothetical protein BRAFLDRAFT_90088 [Branchiostoma floridae]
Length = 367
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 233 VLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDL 292
+L LG +GD A++YF S+ +MK D ++ SLN +G GD
Sbjct: 106 LLSNLGSSWHKVGDYKKAISYFQQSLS-MMKTIYGDNTAHPDIAASLNGLGSYWSNLGDY 164
Query: 293 QAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDRS-IGNEDVAVDGFQ 348
+ A YY +SL++++ H ++ + ++ +S + S +G++ A+ +Q
Sbjct: 165 KKAIGYYQQSLSMQKTIYGGGTVHPDIAQSLNNLGLSWINYLGLSWSRLGDDKKAISYYQ 224
Query: 349 EAIKRLESL 357
+A+ ++++
Sbjct: 225 QALSMMKTI 233
>gi|154338377|ref|XP_001565413.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062462|emb|CAM42324.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 395
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEA 135
+C +C + + TPC H++CKAC K+CP+C I+ ++
Sbjct: 14 FTCAVCLDSWKDPIELTPCGHIFCKACAQDLKECPVCRKKIDLMKT 59
>gi|426397205|ref|XP_004064814.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Gorilla gorilla gorilla]
Length = 718
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 507
>gi|219120669|ref|XP_002181068.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407784|gb|EEC47720.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 740
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 278 SLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSI 337
SLN IG + + A + + +SLN+RR+ + DVA+ L VA V +
Sbjct: 555 SLNSIGLVFFKLAQFTKALTSFGQSLNIRRNVLGDSHQ------DVAIILYNVATVYMEL 608
Query: 338 GNEDVAVDGFQEAIKRLESLTLKP 361
G ED AV+ ++E I R+E L P
Sbjct: 609 GQEDEAVEFYRETI-RVEKTALGP 631
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 279 LNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVK-RHSNVPSQVLDVAVSLAKVADVDRSI 337
+NKIG+L Y GD +A Y++ L + R+ + H N +AV+L+ + + +
Sbjct: 430 MNKIGNLHYEAGDFDSAIDMYLQGLYMEREVLADAHPN-------IAVTLSNIGQIFKQR 482
Query: 338 GNEDVAVDGFQEAI 351
G D A+ ++EA
Sbjct: 483 GEYDSALRLYEEAF 496
>gi|260827545|ref|XP_002608725.1| hypothetical protein BRAFLDRAFT_73946 [Branchiostoma floridae]
gi|229294077|gb|EEN64735.1| hypothetical protein BRAFLDRAFT_73946 [Branchiostoma floridae]
Length = 893
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
LG LG + D A++Y+ +++ + + + I H ++ SL+ +G+ GD
Sbjct: 762 LGNLGIAWTDLFDYRKAISYYEQALKMMWSIYGES--IAHPDIATSLDNLGNAWRSLGDH 819
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
+ A SY+ +SL +RR + P D++ SL+ + V +G+ A+ +++++
Sbjct: 820 RKALSYHEQSLQMRRSIYGEGAEHP----DISTSLSNLGTVWNHLGDHRKAIAYIEQSLQ 875
Query: 353 RLESLTLKP 361
S+ +P
Sbjct: 876 MERSIYERP 884
>gi|449442949|ref|XP_004139243.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449483021|ref|XP_004156472.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 451
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
++C +C LL E + + C H +C+ CI + D CP+C D +EK+ D
Sbjct: 17 MTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDDEVDCCPVCDIDLGCLPVEKLRPDHN 76
Query: 139 LQDV 142
LQD+
Sbjct: 77 LQDI 80
>gi|432113021|gb|ELK35599.1| Polycomb group RING finger protein 6 [Myotis davidii]
Length = 351
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 194
Query: 142 VVDRFI 147
+V + +
Sbjct: 195 IVYKLV 200
>gi|6324518|ref|NP_014587.1| ubiquitin-protein ligase PSH1 [Saccharomyces cerevisiae S288c]
gi|74676541|sp|Q12161.1|PSH1_YEAST RecName: Full=RING finger protein PSH1; AltName: Full=POB3/SPT16
histone-associated protein 1
gi|984189|emb|CAA62533.1| Zn-finger (C3HC4) protein [Saccharomyces cerevisiae]
gi|1419863|emb|CAA99062.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190407291|gb|EDV10558.1| hypothetical protein SCRG_01349 [Saccharomyces cerevisiae RM11-1a]
gi|256273953|gb|EEU08872.1| Psh1p [Saccharomyces cerevisiae JAY291]
gi|259149430|emb|CAY86234.1| Psh1p [Saccharomyces cerevisiae EC1118]
gi|285814836|tpg|DAA10729.1| TPA: ubiquitin-protein ligase PSH1 [Saccharomyces cerevisiae S288c]
gi|323331676|gb|EGA73090.1| Psh1p [Saccharomyces cerevisiae AWRI796]
gi|323352338|gb|EGA84873.1| Psh1p [Saccharomyces cerevisiae VL3]
gi|392296277|gb|EIW07379.1| Psh1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 406
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRF------KD--CPLCGADIEKIEA-DT 137
I L C IC +F TPC H YC C++ + K+ CP C +DI I A +T
Sbjct: 25 IESLVCSICHDYMF-VPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRSDITTIPALNT 83
Query: 138 TLQDVVDRFIE-----GHARIKRSHTNSDKEEDEAGENKK 172
TLQ + +E K+ T KEE++ +K+
Sbjct: 84 TLQQYLSFILEKLRDQNDESFKKLLTTKTKEENDYKNDKE 123
>gi|154338379|ref|XP_001565414.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062463|emb|CAM42325.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 395
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEA 135
+C +C + + TPC H++CKAC K+CP+C I+ ++
Sbjct: 14 FTCAVCLDSWKDPIELTPCGHIFCKACAQDLKECPVCRKKIDLMKT 59
>gi|441658560|ref|XP_004091267.1| PREDICTED: E3 ubiquitin-protein ligase RNF180-like [Nomascus
leucogenys]
Length = 184
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 24 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 83
Query: 145 RFI-EGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGA 184
F + + +IK+S S+ + +K + R A
Sbjct: 84 TFFTKEYLKIKQSFQKSNSAKWPLPSCRKAFHLFGGFRRHA 124
>gi|431892517|gb|ELK02950.1| Putative E3 ubiquitin-protein ligase SH3RF2 [Pteropus alecto]
Length = 768
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 73/200 (36%), Gaps = 47/200 (23%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISR-FK-----DCPLCGA----DIEKIEADTTL 139
L+C +C L +K PC H +CK C+ R FK CP C IE + A+ L
Sbjct: 10 LACPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPECRTLVFCSIEALPANLLL 69
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNV 199
++D S + G S R L Q R R N+
Sbjct: 70 VRLLD------------GVRSGQSTGRGG----------SFRRPGVLASQDSRKSRT-NL 106
Query: 200 ESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGML----GDCC---------RAMGD 246
S +S +IR ++ + LC+ G G L GD G+
Sbjct: 107 RSLQSSPFRLVPNIRIHMDGVPRAKALCNYRGQNPGDLRFNKGDVILLRRQLDENWFQGE 166
Query: 247 ADAAVAYF-ADSVEFLMKLP 265
+ A +F A SVE + +LP
Sbjct: 167 INGASGFFPASSVEVIKQLP 186
>gi|354493983|ref|XP_003509119.1| PREDICTED: E3 ubiquitin-protein ligase RNF180 [Cricetulus griseus]
Length = 592
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGA 184
F + + +IK+S S + KK + R A
Sbjct: 492 TFFTKEYLKIKQSFQKSSSAKWPLPSCKKGFHLFGGFHRHA 532
>gi|410039341|ref|XP_003950601.1| PREDICTED: E3 ubiquitin-protein ligase RNF180-like [Pan
troglodytes]
Length = 190
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 30 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 89
Query: 145 RFI-EGHARIKRSHTNSDKEEDEAGENKKVIYEDVSMERGA 184
F + + +IK+S S+ + +K + R A
Sbjct: 90 TFFTKEYLKIKQSFQKSNSAKWPLPSCRKAFHLFGGFRRHA 130
>gi|260818705|ref|XP_002604523.1| hypothetical protein BRAFLDRAFT_79367 [Branchiostoma floridae]
gi|229289850|gb|EEN60534.1| hypothetical protein BRAFLDRAFT_79367 [Branchiostoma floridae]
Length = 1306
Score = 42.0 bits (97), Expect = 0.58, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 228 SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLK 286
S L G AMGD A+ Y+ +++ M+ + E H +++SLN +G
Sbjct: 911 SDFATALTNTGSVLDAMGDYRKAIIYYKQALQ--MRRSIYGQETAHADIAMSLNNLGAAF 968
Query: 287 YYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDG 346
+ D A +Y+ +L +RR + P D+A SL V +G+ A+D
Sbjct: 969 HKLSDHSRAITYHEEALQMRRSIYGETTAHP----DIAQSLNNVGSALEKLGDYIKAIDY 1024
Query: 347 FQEAIKRLESL 357
+++A++ S+
Sbjct: 1025 YEQALQMYRSV 1035
Score = 38.5 bits (88), Expect = 6.4, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-LSVSLNKIGDLKYY 288
+ +L +G +GD A++YF ++ F M+ + IH ++ SLN +G +
Sbjct: 693 IAGLLNNMGGAWSHLGDYRKALSYFEEA--FQMQKSVHGQSTIHAEIATSLNNLGSAWIH 750
Query: 289 GGDLQAARSYYVRSLNVRRDAVKR---HSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
GD + A +Y ++L + R H + + ++ SL + D +S+ ++ A+
Sbjct: 751 LGDYRKATNYNEQALQMYRSVYGHNTAHPTIAKSLTNLGASLRQQGDYKKSLSYDEQALQ 810
Query: 346 GFQ 348
++
Sbjct: 811 MYR 813
>gi|194223847|ref|XP_001491300.2| PREDICTED: e3 ubiquitin-protein ligase RNF180 isoform 1 [Equus
caballus]
Length = 592
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFFQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 492 TFFTKEYLKIKQSFQKS 508
>gi|10439066|dbj|BAB15419.1| unnamed protein product [Homo sapiens]
Length = 516
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 216 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 274
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 275 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 305
>gi|426254187|ref|XP_004020762.1| PREDICTED: RING finger protein 151 [Ovis aries]
Length = 239
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 79 GYDAQSFKIGP---LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI- 130
GYD F P L C +C + + PCSH++CK CI R+ K CP C ++
Sbjct: 4 GYDLNLFTSPPDCNLLCSVCHGVFKRPVR-LPCSHIFCKKCILRWLARQKTCPCCRKEVR 62
Query: 131 -EKIEADTTLQDVVDRF 146
K+ LQ ++ R
Sbjct: 63 QRKMVHVNNLQKIIGRL 79
>gi|323307086|gb|EGA60369.1| Psh1p [Saccharomyces cerevisiae FostersO]
Length = 406
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRF------KD--CPLCGADIEKIEA-DT 137
I L C IC +F TPC H YC C++ + K+ CP C +DI I A +T
Sbjct: 25 IESLVCSICHDYMF-VPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRSDITTIPALNT 83
Query: 138 TLQDVVDRFIE 148
TLQ + +E
Sbjct: 84 TLQQYLSFILE 94
>gi|297139721|ref|NP_001171921.1| E3 ubiquitin-protein ligase RNF135 isoform 3 [Homo sapiens]
Length = 286
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI--------SRFKDCPLC---GADIEKIEADTT 138
L C+ICQ LL + PC H +C+ C+ +R CP C A + +T
Sbjct: 19 LGCIICQGLL-DWPATLPCGHSFCRHCLEALWGARDARRWACPTCRQGAAQQPHLRKNTL 77
Query: 139 LQDVVDRF 146
LQD+ D++
Sbjct: 78 LQDLADKY 85
>gi|281352081|gb|EFB27665.1| hypothetical protein PANDA_001793 [Ailuropoda melanoleuca]
Length = 288
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQD 141
C IC+ L + + T C H +CK+CI R CP C + + I D LQD
Sbjct: 83 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQD 142
Query: 142 VVDRFI 147
+V + +
Sbjct: 143 IVYKLV 148
>gi|151945580|gb|EDN63821.1| pob3/spt16 histone associated protein [Saccharomyces cerevisiae
YJM789]
Length = 406
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRF------KD--CPLCGADIEKIEA-DT 137
I L C IC +F TPC H YC C++ + K+ CP C +DI I A +T
Sbjct: 25 IESLVCSICHDYMF-VPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRSDITTIPALNT 83
Query: 138 TLQDVVDRFIE-----GHARIKRSHTNSDKEEDEAGENKK 172
TLQ + +E K+ T KEE++ +K+
Sbjct: 84 TLQQYLSFILEKLRDQNDESFKKLLTTKTKEENDYKNDKE 123
>gi|383866191|ref|XP_003708554.1| PREDICTED: polycomb group RING finger protein 3-like [Megachile
rotundata]
Length = 230
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 20 ITCKICRGYLIDATTVTECLHTFCKSCLVKHLEEKHTCPTCQIVIHQSHPLQYISFDRTM 79
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 80 QDIVYKLV 87
>gi|365763197|gb|EHN04727.1| Psh1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 406
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRF------KD--CPLCGADIEKIEA-DT 137
I L C IC +F TPC H YC C++ + K+ CP C +DI I A +T
Sbjct: 25 IESLVCSICHDYMF-VPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRSDITTIPALNT 83
Query: 138 TLQDVVDRFIE-----GHARIKRSHTNSDKEEDEAGENKK 172
TLQ + +E K+ T KEE++ +K+
Sbjct: 84 TLQQYLSFILEKLRDQNDESFKKLLTTKTKEENDYKNDKE 123
>gi|74191552|dbj|BAE30351.1| unnamed protein product [Mus musculus]
gi|74214705|dbj|BAE31192.1| unnamed protein product [Mus musculus]
Length = 592
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFLQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 492 TFFTKEYLKIKQSFQKS 508
>gi|356570616|ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 428
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-SRFKD-----CPLCGAD-----IEKIEADTT 138
++C +C L E + + C H +C+ CI + D CP+C D +EK+ D +
Sbjct: 17 MTCPLCGKLFREATTISECLHTFCRKCIYDKITDEEIECCPICNIDLGCVPLEKLRPDHS 76
Query: 139 LQDV 142
LQDV
Sbjct: 77 LQDV 80
>gi|392870027|gb|EAS28575.2| DNA repair protein rad18 [Coccidioides immitis RS]
Length = 411
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIE--KIEADTTLQDVV 143
L C +C+ L F+ T C H +C CI R CP C AD + K+ + + +VV
Sbjct: 28 LRCQVCKDL-FKNPVTTSCCHTFCSICIRRCLSADGKCPTCRADDQAVKLRQNWAVDEVV 86
Query: 144 DRFIE------GHARIKRSHTNSDKEEDEAGENKKV--IYEDVSMERG 183
D F + G AR + NSD E + +++ + + S E G
Sbjct: 87 DSFRQVRGDLLGFARNLSAGPNSDSREARIPKKRRIEEMQDATSQENG 134
>gi|296486315|tpg|DAA28428.1| TPA: polycomb group RING finger protein 3 [Bos taurus]
Length = 179
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 75 QDIVYKLVPG 84
>gi|260805258|ref|XP_002597504.1| hypothetical protein BRAFLDRAFT_78938 [Branchiostoma floridae]
gi|229282769|gb|EEN53516.1| hypothetical protein BRAFLDRAFT_78938 [Branchiostoma floridae]
Length = 1525
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYY 288
+ +L +G +++GD AV YF S++ + ++ H ++ L+ +G+L
Sbjct: 957 IAGLLNCMGGLWKSLGDYHKAVNYFEQSLQMNQDIYREN--TAHPEIAAPLHNLGNLWRR 1014
Query: 289 GGDLQAARSYYVRSLNVRR---DAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVD 345
GD + A SYY +SL + R A HSN +A +L + +V R++G+
Sbjct: 1015 LGDYRKAVSYYEQSLMMERRIYGANTAHSN-------IAKTLHDLGNVWRNLGDPSKTYS 1067
Query: 346 GFQEAIKRLE 355
++++++ +
Sbjct: 1068 YYEQSLRMWQ 1077
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 209 CTED-IRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMD 267
C E ++D + + GN + + L LG +GD A+ YF +++ M+ +
Sbjct: 849 CNEQALQDDLSKYGNAAH--PNIAHSLNSLGGAWSDLGDKKKAIGYFEQALD--MRRSIY 904
Query: 268 DLEIIHT-LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVS 326
H + VSL +G+ GD + A SYY ++L++ ++ P ++A
Sbjct: 905 GESTAHADIVVSLTNLGNAWIELGDQENANSYYEQALHMALSIHGENTAHP----NIAGL 960
Query: 327 LAKVADVDRSIGNEDVAVDGFQEAIK 352
L + + +S+G+ AV+ F+++++
Sbjct: 961 LNCMGGLWKSLGDYHKAVNYFEQSLQ 986
>gi|260826323|ref|XP_002608115.1| hypothetical protein BRAFLDRAFT_91407 [Branchiostoma floridae]
gi|229293465|gb|EEN64125.1| hypothetical protein BRAFLDRAFT_91407 [Branchiostoma floridae]
Length = 225
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+ A L LG+ R + D AV Y+ S++ + + +D ++ SLN +G+
Sbjct: 15 IAASLNNLGEAWRILVDHRKAVNYYEQSLQMMRSIYGED-NAHPDIAASLNNLGNAWSDL 73
Query: 290 GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQE 349
GD + A SY+ +SL+++R + + P D+A SL ++GN + + G ++
Sbjct: 74 GDHRKAVSYHEQSLHMKRSIYGKGNAHP----DIAASL-------NNLGNAWINLGGHRK 122
Query: 350 AIKRLE-SLTLKPEEAGLEQRRLSVLEFLNN 379
A+ E SL ++ G + + LNN
Sbjct: 123 AVSYHEQSLQMRRSIYGKDTAHPDIANSLNN 153
>gi|60280221|gb|AAX16495.1| recombination-activating protein 1 [Cyprinus carpio]
Length = 1062
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 61 KAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRF 120
+ + D + + IPP+ P + + ++C +C LL + + +PC H++C+ CI R+
Sbjct: 276 QCQRDHLSTKLIPPEVPAHF------LHAVTCQVCDHLLSDPVQ-SPCRHLFCRVCILRY 328
Query: 121 -----KDCPLCGADI 130
++CP C +
Sbjct: 329 SRALGQNCPTCNQHL 343
>gi|406861082|gb|EKD14138.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1478
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIE 134
C+IC+ FE T C H YCK CI + D CP+C + K++
Sbjct: 1117 CVICRET-FEVGALTVCGHQYCKGCIRMWWDTHRNCPVCKRKLSKVD 1162
>gi|328776963|ref|XP_001120353.2| PREDICTED: polycomb group RING finger protein 3-like [Apis
mellifera]
gi|340728415|ref|XP_003402520.1| PREDICTED: polycomb group RING finger protein 3-like [Bombus
terrestris]
gi|350405292|ref|XP_003487388.1| PREDICTED: polycomb group RING finger protein 3-like [Bombus
impatiens]
gi|380024257|ref|XP_003695920.1| PREDICTED: polycomb group RING finger protein 3-like [Apis florea]
Length = 230
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C IC+ L + + T C H +CK+C+ + + CP C I + I D T+
Sbjct: 20 ITCKICKGYLIDATTVTECLHTFCKSCLVKHLEEKHTCPTCQIVIHQSHPLQYISFDRTM 79
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 80 QDIVYKLV 87
>gi|118347794|ref|XP_001007373.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89289140|gb|EAR87128.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 747
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 233 VLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG-GD 291
++ +G+ +GD A Y S+ ++ +D + I T ++N IGD Y G GD
Sbjct: 513 IIQNIGNLNNFLGDYQKAEKYLLKSLNLRKEIFKEDHQDIAT---NMNYIGD-SYLGLGD 568
Query: 292 LQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
Q A +Y++SL +R+ + ++ N +A SL S+GN + + +++A
Sbjct: 569 YQKALEFYLKSLRIRQKILNKNHN------SIATSL-------NSVGNCYLKLKNYKQAQ 615
Query: 352 KRL-ESLTLK 360
K L +SL ++
Sbjct: 616 KNLFQSLNMR 625
>gi|301106106|ref|XP_002902136.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098756|gb|EEY56808.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 465
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 84 SFKIGP--LSCMICQALLFECSKCTPCSHVYCKACIS-----RFKDCPLCGADIEKIEAD 136
+F++GP L+C IC + C+H +C +C+S RF+ CPLC D
Sbjct: 196 NFRLGPRALTCPICLCADVQAPITLSCAHTFCWSCLSRAAQHRFRSCPLCRRAQSVDPRD 255
Query: 137 TTLQDVVDRFIEGHARIKRS 156
+ +V RF + ++++
Sbjct: 256 YEIDGLVKRFKRAYEFVEQA 275
>gi|145477881|ref|XP_001424963.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392030|emb|CAK57565.1| unnamed protein product [Paramecium tetraurelia]
Length = 1215
Score = 41.6 bits (96), Expect = 0.61, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 83 QSFKIGPLS-CMICQALLFECSKCTPCSHVYCKAC----ISRFKDCPLCGADIEKIEADT 137
++ K G ++ C+IC + C H+YCK C + + K+CP C +
Sbjct: 967 ENIKNGSITECLICTKSQISVFSLSSCGHIYCKECFGETVVKLKNCPSCRTKL------- 1019
Query: 138 TLQDVVDRFIE 148
T+QD++D +E
Sbjct: 1020 TIQDLIDVVVE 1030
>gi|332226228|ref|XP_003262291.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Nomascus leucogenys]
Length = 516
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 216 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 274
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 275 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 305
>gi|109514763|ref|XP_001059102.1| PREDICTED: polycomb group RING finger protein 2-like [Rattus
norvegicus]
Length = 331
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
L C + + C H +CK I R+ K CP+C + K I +D TL
Sbjct: 16 LMCALYGGYFINTTTIVECLHSFCKTFIVRYLETNKYCPMCDVQVHKTGPLLSIRSDKTL 75
Query: 140 QDVVDRFIEG 149
QD+V + + G
Sbjct: 76 QDIVYKLVSG 85
>gi|301092587|ref|XP_002997148.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111597|gb|EEY69649.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 465
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 84 SFKIGP--LSCMICQALLFECSKCTPCSHVYCKACIS-----RFKDCPLCGADIEKIEAD 136
+F++GP L+C IC + C+H +C +C+S RF+ CPLC D
Sbjct: 196 NFRLGPRALTCPICLCADVQAPITLSCAHTFCWSCLSRAAQHRFRSCPLCRRAQSVDPRD 255
Query: 137 TTLQDVVDRFIEGHARIKRS 156
+ +V RF + ++++
Sbjct: 256 YEIDGLVKRFKRAYEFVEQA 275
>gi|118573801|sp|Q3U827.2|RN180_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF180; AltName:
Full=RING finger protein 180
Length = 592
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFLQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 492 TFFTKEYLKIKQSFQKS 508
>gi|403279124|ref|XP_003931116.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 3 [Saimiri boliviensis boliviensis]
Length = 613
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 462 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 520
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 521 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 551
>gi|28386168|gb|AAH46775.1| Rnf180 protein [Mus musculus]
gi|49898553|gb|AAH75700.1| Rnf180 protein [Mus musculus]
gi|74192088|dbj|BAE34259.1| unnamed protein product [Mus musculus]
gi|148686533|gb|EDL18480.1| mCG22907, isoform CRA_a [Mus musculus]
Length = 591
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 431 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFLQTELNNATK 490
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 491 TFFTKEYLKIKQSFQKS 507
>gi|330792078|ref|XP_003284117.1| hypothetical protein DICPUDRAFT_86130 [Dictyostelium purpureum]
gi|325085931|gb|EGC39329.1| hypothetical protein DICPUDRAFT_86130 [Dictyostelium purpureum]
Length = 606
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFK----DCPLCGADIEKIEADTTLQDVVDR 145
L C ICQ ++ +C PC H +C C ++ DCP C +++ +++ + ++++
Sbjct: 281 LICGICQDIIHKCLTLIPCMHNFCVCCYGDWRAKSTDCPSCRLNVKSYQSNHLINNLIEL 340
Query: 146 FIEGHARIKR 155
+++ + R
Sbjct: 341 YVKKNPEKAR 350
>gi|398016091|ref|XP_003861234.1| hypothetical protein, conserved, partial [Leishmania donovani]
gi|322499459|emb|CBZ34532.1| hypothetical protein, conserved, partial [Leishmania donovani]
Length = 270
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
L+C +C + + PC H++CKAC + K+CP+C I +A + +V+ ++
Sbjct: 14 LTCAVCLDSWKDPVELMPCGHIFCKACATGLKECPVCRDPILSTKAPN--RTLVNMALQI 71
Query: 150 HARIKRSHTNSDKEE 164
+ +R +E+
Sbjct: 72 RVKCRRCQWKGTREQ 86
>gi|201066393|ref|NP_001128458.1| ring finger protein 180 [Rattus norvegicus]
gi|149059271|gb|EDM10278.1| rCG44674, isoform CRA_a [Rattus norvegicus]
gi|197245906|gb|AAI68657.1| Rnf180 protein [Rattus norvegicus]
Length = 592
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 432 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRVFLQTELNNATK 491
Query: 145 RFI-EGHARIKRSHTNS 160
F + + +IK+S S
Sbjct: 492 TFFTKEYLKIKQSFQKS 508
>gi|396479423|ref|XP_003840750.1| similar to RING finger domain containing protein [Leptosphaeria
maculans JN3]
gi|312217323|emb|CBX97271.1| similar to RING finger domain containing protein [Leptosphaeria
maculans JN3]
Length = 901
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-------------KDCPLCGADIEKIEAD 136
L+C IC LL++ C H +C AC+ + CP C A + + +
Sbjct: 18 LTCSICTDLLYQPLTLLDCLHSFCGACLKEWFAFQASTATSIHPYTCPSCRASVRTTQPN 77
Query: 137 TTLQDVVDRFIEGHARIKRSHTNSDKEED 165
T+ ++D F++ A R T+++K+ D
Sbjct: 78 ATVTTLLDIFLK--ANPGRGKTDTEKKAD 104
>gi|194754545|ref|XP_001959555.1| GF11991 [Drosophila ananassae]
gi|190620853|gb|EDV36377.1| GF11991 [Drosophila ananassae]
Length = 1606
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +C L + + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 245 CHLCTGYLVDATTIVECLHSFCHSCLINHLRKERF--CPRCKMVINSAKPNIKSDTTLQA 302
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 303 IVYKLVPG 310
>gi|157870209|ref|XP_001683655.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126721|emb|CAJ05001.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 394
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIEADTTLQDVVDRFIEG 149
L+C +C + + PC H++CKAC + K+CP+C I + + +V+ ++
Sbjct: 14 LTCAVCLDSWKDPVELMPCGHIFCKACATGLKECPVCRDPIRSTKVPN--RTLVNMALQI 71
Query: 150 HARIKRSHTNSDKEE 164
+ +R +E+
Sbjct: 72 QVKCRRCQWRGTREQ 86
>gi|268531570|ref|XP_002630911.1| Hypothetical protein CBG02635 [Caenorhabditis briggsae]
Length = 707
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 90 LSCMICQALLF--ECSKCTPCSHVYCKACISRF------KDCPLCGADIEKIEAD 136
L C IC + F EC + C+H +C +CIS + CP+C DIEKI D
Sbjct: 23 LQCTICLSSKFSQEC-RVNGCNHAFCFSCISEWVTQSMRPSCPMCRHDIEKIFYD 76
>gi|410928474|ref|XP_003977625.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Takifugu rubripes]
Length = 736
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEA-----DTTLQ 140
C +C L +E TPC H +CK C+ R D CPLC +++ A TT+
Sbjct: 440 FECALCMRLFYE-PVTTPCGHTFCKTCLERCLDHTPHCPLCKESLKQYLACRKYMVTTVL 498
Query: 141 DVVDRFIEGHARIKRSHTNSDKEEDEAGENKKV 173
D++ + +R+ T+ D+ + + K V
Sbjct: 499 DLLIKHYLSQEYAERTKTHLDETRELSDLTKNV 531
>gi|297304644|ref|XP_001105370.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like isoform 1 [Macaca mulatta]
Length = 610
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|22859174|emb|CAD43140.1| hypothetical protein [Homo sapiens]
gi|46947021|gb|AAT06743.1| L13 [Homo sapiens]
Length = 432
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI--------SRFKDCPLC---GADIEKIEADTT 138
L C+ICQ LL + PC H +C+ C+ +R CP C A + +T
Sbjct: 19 LGCIICQGLL-DWPATLPCGHSFCRHCLEALWGARDARRWACPTCRQGAAQQPHLRKNTL 77
Query: 139 LQDVVDRF 146
LQD+ D++
Sbjct: 78 LQDLADKY 85
>gi|426341185|ref|XP_004035932.1| PREDICTED: RING finger protein 151-like [Gorilla gorilla gorilla]
Length = 244
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 79 GYDAQSFKIGPLS---CMICQALLFECSKCTPCSHVYCKACI----SRFKDCPLCGADI- 130
GYD F P S C +C +L ++ PCSH++CK CI +R K CP C ++
Sbjct: 4 GYDLNLFASPPDSNFVCSVCHGVLKRPAR-LPCSHIFCKKCILQWLARQKTCPCCRKEVK 62
Query: 131 -EKIEADTTLQDVVDRF 146
+KI LQ + R
Sbjct: 63 RKKIVHMNKLQKTIGRL 79
>gi|402911230|ref|XP_003918240.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 3 [Papio anubis]
Length = 610
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|395510358|ref|XP_003759444.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF180
[Sarcophilus harrisii]
Length = 594
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVV- 143
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 434 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPTSTPCPLCRTIISRVFFQTDLNNATK 493
Query: 144 DRFIEGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 494 TYFTKEYLKIKQSFQKSN 511
>gi|304304312|gb|ADM21462.1| bloodthirsty [Gadus morhua]
Length = 541
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD------CPLCGADIEK---IEADTTLQ 140
SC IC + F TPC H +C+ CI+++ D CP+C + +T L
Sbjct: 13 FSCSICLDV-FSSPVSTPCGHNFCRTCITKYWDEQVKYKCPVCNELFNTRPDLRVNTLLS 71
Query: 141 DVVDRF 146
++VDRF
Sbjct: 72 EMVDRF 77
>gi|441630956|ref|XP_003281850.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CHFR
[Nomascus leucogenys]
Length = 840
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGA-----------DIEKIE 134
L+C+ICQ LL +C PC H +C AC + + CP C A D + E
Sbjct: 290 LTCIICQDLLHDCVSLQPCMHTFCAACYXGWMERSSLCPTCLAASEWRCVLSILDKSRSE 349
Query: 135 ADTTLQDVVDRFIEGHARIKRSHTNSDKE 163
D D ++ + + K + SD+E
Sbjct: 350 EDVKSMDARNKITQDMLQPKVRRSFSDEE 378
>gi|355699592|gb|AES01179.1| LON peptidase N-terminal domain and ring finger 1 [Mustela putorius
furo]
Length = 594
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 14/92 (15%)
Query: 49 NSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPC 108
N K Q E ++ + S+ S IP + + C +C L FE TPC
Sbjct: 267 NKLKKQGE-TRNEVFTFSLTSGDIP--------EELIDVSDFECSLCMRLFFE-PVTTPC 316
Query: 109 SHVYCKACISRFKD----CPLCGADIEKIEAD 136
H +CK C+ R D CPLC +++ AD
Sbjct: 317 GHSFCKNCLERCLDHTPYCPLCKESLKEYLAD 348
>gi|326430790|gb|EGD76360.1| hypothetical protein PTSG_01060 [Salpingoeca sp. ATCC 50818]
Length = 799
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 19/96 (19%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF-------KDCPLC-----GADIEKIEADT 137
L+C IC LFE + T C H +C+ C+ R +CP C D +K+E D
Sbjct: 88 LTCAICLDFLFEPVRST-CGHSFCRTCLRRLLEFDGSRANCPKCRQSFARMDPDKLEIDR 146
Query: 138 TLQDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKV 173
L + V R E KR K E E E + V
Sbjct: 147 PLAETVQRNFEMEEMAKR------KAEAEVDEQEYV 176
>gi|301627779|ref|XP_002943041.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Xenopus
(Silurana) tropicalis]
Length = 582
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD---------CPLCGADIEK---IEADT 137
L+C IC ++ + PC H +C+ CI R D CP C A ++ ++ +
Sbjct: 70 LNCSICLSI-YTHPVTLPCGHSFCQGCIGRVLDTQKRCGLYTCPDCRAKFKRRPALQRNR 128
Query: 138 TLQDVVDRFIEGHAR 152
TL ++ +RF+ GH +
Sbjct: 129 TLGNIAERFLPGHPK 143
>gi|158295814|ref|XP_001237808.2| AGAP006403-PA [Anopheles gambiae str. PEST]
gi|157016217|gb|EAU76594.2| AGAP006403-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK----IEADTTLQD 141
++C +C+ L + + C H +C +CI + + CP C I K I+ D TLQ
Sbjct: 97 ITCHLCKGYLIDATTIVECLHSFCHSCIMKHLRTEQYCPQCEMMINKAKPNIKPDATLQA 156
Query: 142 VVDRFI 147
+V + +
Sbjct: 157 IVYKLV 162
>gi|119610292|gb|EAW89886.1| LON peptidase N-terminal domain and ring finger 3, isoform CRA_b
[Homo sapiens]
gi|193783588|dbj|BAG53499.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 203 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 261
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 262 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 292
>gi|395748786|ref|XP_003778828.1| PREDICTED: E3 ubiquitin-protein ligase RNF135 isoform 2 [Pongo
abelii]
Length = 286
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS--------RFKDCPLC---GADIEKIEADTT 138
L C+ICQ LL + PC H +C+ C+ R CP C A ++ +T
Sbjct: 19 LGCIICQGLL-DWPATLPCGHSFCRHCLEGLWGARGVRRWACPTCRQGAAQQPQLRKNTL 77
Query: 139 LQDVVDRF 146
LQD+ D++
Sbjct: 78 LQDLADKY 85
>gi|296219359|ref|XP_002755826.1| PREDICTED: RING finger protein 151 [Callithrix jacchus]
Length = 258
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 41 AASRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLF 100
+AS + + KP D K+ ++ + PP C F C +C+ +L
Sbjct: 22 SASEDQLSAAFKPGGSIDLSKSGGYDLNLFASPPGCNF------------LCSVCRGVLK 69
Query: 101 ECSKCTPCSHVYCKACI----SRFKDCPLCGADIE--KIEADTTLQDVVDRF 146
++ PCSH++CK CI +R K CP C ++ KI + L+ + R
Sbjct: 70 RPAR-LPCSHIFCKKCILQWLTRQKTCPCCRKQVKKRKIVYENKLRKTISRL 120
>gi|426257663|ref|XP_004022444.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Ovis aries]
Length = 759
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 548
>gi|410984734|ref|XP_003998681.1| PREDICTED: tripartite motif-containing protein 72 [Felis catus]
Length = 477
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD---------CPLCGADIEKIEADTTLQ 140
LSC +C L F+ C H +C+AC+SR CP C A +T LQ
Sbjct: 12 LSCPLCLQL-FDAPVTAECGHSFCRACLSRVAGEPAADGTVPCPCCQALTRPQALNTNLQ 70
Query: 141 DVVDRFIEGHARIKRSH 157
+ R +EG A++ + H
Sbjct: 71 --LARLVEGLAQVPQGH 85
>gi|242047616|ref|XP_002461554.1| hypothetical protein SORBIDRAFT_02g004666 [Sorghum bicolor]
gi|241924931|gb|EER98075.1| hypothetical protein SORBIDRAFT_02g004666 [Sorghum bicolor]
Length = 179
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 54/141 (38%), Gaps = 37/141 (26%)
Query: 12 PDDASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDSAS 71
P A PR NS A P S P D A R+ G A+ + ++
Sbjct: 13 PSTAGPRPNTANS----ATIPHSDQSPRDGAVREGCRG---------GTGAEESLVRASV 59
Query: 72 IPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPL 125
+ P+ +SC IC LL + + T C H +C+ CI + CP
Sbjct: 60 VAPR--------------VSCGICGGLLHDATAFTECLHAFCRKCIYDKVAKDNIECCPK 105
Query: 126 CGA----DIEKIEADTTLQDV 142
CG +EK+ D +LQ +
Sbjct: 106 CGIFLGNPLEKLRPDHSLQHI 126
>gi|260808191|ref|XP_002598891.1| hypothetical protein BRAFLDRAFT_90083 [Branchiostoma floridae]
gi|229284166|gb|EEN54903.1| hypothetical protein BRAFLDRAFT_90083 [Branchiostoma floridae]
Length = 1173
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD A+ YF S+ + D+ H ++ SLN +G GD
Sbjct: 928 LNNLGSSLSKLGDHKKAIGYFQQSLSTRKTIYGDN--TAHPDIAQSLNNLGSSWTQLGDH 985
Query: 293 QAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
+ A SYY +SL++++ ++ P D+A SL + +G+ A+ FQ+++
Sbjct: 986 RKAISYYQQSLSMKKTIYGDNTAHP----DIAESLNNLGSSLSKLGDHKKAIGYFQQSL 1040
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKIGDLKYYGGDL 292
L LG +GD A+ YF S+ + D+ H ++ SLN +G GD
Sbjct: 1016 LNNLGSSLSKLGDHKKAIGYFQQSLSTRKTIYGDN--TAHPDIAQSLNNLGSSWSELGDN 1073
Query: 293 QAARSYYVRSLNVRRDAV---KRHSNVPSQVLDVAVSLAKVADVDRSIG 338
+ A SYY +SL++++ H ++ + ++ SL+K+ D ++IG
Sbjct: 1074 RKAISYYQQSLSMKKTIYGDNTAHPDIAESLNNLGSSLSKLGDHKKAIG 1122
>gi|119486646|ref|ZP_01620696.1| hypothetical protein L8106_12885 [Lyngbya sp. PCC 8106]
gi|119456263|gb|EAW37395.1| hypothetical protein L8106_12885 [Lyngbya sp. PCC 8106]
Length = 1471
Score = 41.6 bits (96), Expect = 0.69, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 29/161 (18%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L +G +GD+ A+ YF S+ ++ I ++ +LN IG + GD Q
Sbjct: 657 LNNIGGVYYTLGDSQRALNYFNQSLSLTRQVG-----IKAGVAATLNNIGSVYDDLGDSQ 711
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI-- 351
A YY +SL++RR + AV+L + V +G++ A+D + +++
Sbjct: 712 QALEYYNQSLSLRRQVGNKAGE--------AVTLNNIGGVYNDLGDKQQALDFYNQSLPL 763
Query: 352 ------KRLESLTLKP-----EEAGLEQRRLSVLEFLNNQL 381
KR E+ TL ++ G +Q+ L++LN L
Sbjct: 764 SRQVGDKRQEATTLNNIGRVYDDLGDKQQ---ALDYLNQSL 801
Score = 38.9 bits (89), Expect = 4.4, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 231 GAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGG 290
+L +G A+GD+ A+ Y+ S+ ++ LE + +LN IG + G
Sbjct: 494 ATILSNIGAVYDALGDSQQALNYYNQSLSLRQQVGDKALE-----ANTLNNIGLVYNALG 548
Query: 291 DLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEA 350
D Q A YY +SL + R + A +L+ + V ++G++ +A+D + ++
Sbjct: 549 DRQTALDYYNQSLPLSRQVGDKAGE--------ANTLSNIGAVYDALGDKQIALDFYNQS 600
Query: 351 I--------KRLESLTL 359
+ K LE+ TL
Sbjct: 601 LPLSRQVGNKALEAATL 617
>gi|71043356|gb|AAZ20640.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 520
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLCGADIE----KIEADTTLQD 141
C +CQ L + C H +C +C+ RF CP C I I++DTTLQ
Sbjct: 265 CHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAKPNIKSDTTLQA 322
Query: 142 VVDRFIEG 149
+V + + G
Sbjct: 323 IVYKLVPG 330
>gi|380491054|emb|CCF35585.1| DNA repair protein rad18 [Colletotrichum higginsianum]
Length = 454
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIE--KIEADTTLQDVV 143
L C +C+ F+ T C H +C CI R CPLC A + K+ ++ ++++VV
Sbjct: 28 LRCQVCKDF-FKTPMLTSCCHTFCSLCIRRALANDGKCPLCRASDQELKLRSNWSMEEVV 86
Query: 144 DRFIEGHARIKRSHTNSDKEEDEAGENKKVI 174
+ F++ S K+ G K+ +
Sbjct: 87 ESFVKARKDTLHFARTSSKQTKTRGSPKRKL 117
>gi|37655167|ref|NP_115698.3| E3 ubiquitin-protein ligase RNF135 isoform 1 [Homo sapiens]
gi|269849639|sp|Q8IUD6.2|RN135_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF135; AltName:
Full=RIG-I E3 ubiquitin ligase; Short=REUL; AltName:
Full=RING finger protein 135; AltName: Full=Riplet
gi|116497065|gb|AAI26421.1| Ring finger protein 135 [Homo sapiens]
gi|116497067|gb|AAI26423.1| Ring finger protein 135 [Homo sapiens]
gi|213972519|dbj|BAG84604.1| Riplet [Homo sapiens]
Length = 432
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI--------SRFKDCPLC---GADIEKIEADTT 138
L C+ICQ LL + PC H +C+ C+ +R CP C A + +T
Sbjct: 19 LGCIICQGLL-DWPATLPCGHSFCRHCLEALWGARDARRWACPTCRQGAAQQPHLRKNTL 77
Query: 139 LQDVVDRF 146
LQD+ D++
Sbjct: 78 LQDLADKY 85
>gi|18402394|ref|NP_565702.1| E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana]
gi|75306338|sp|Q94AY3.1|DRIP2_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP2; AltName:
Full=DREB2A-interacting protein 2
gi|15010634|gb|AAK73976.1| At2g30580/T6B20.7 [Arabidopsis thaliana]
gi|20198328|gb|AAB63079.2| putative C3HC4 zinc finger protein [Arabidopsis thaliana]
gi|23308209|gb|AAN18074.1| At2g30580/T6B20.7 [Arabidopsis thaliana]
gi|330253317|gb|AEC08411.1| E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana]
Length = 420
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLC-----GADIEKIEADTT 138
++C +C LL + + + C H +C+ CI + CP+C G +EK+ D
Sbjct: 18 MTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGTPLEKLRPDHI 77
Query: 139 LQDV 142
LQD+
Sbjct: 78 LQDL 81
>gi|410060898|gb|AFV53423.1| immediate-early transactivator protein with Zn finger (cell
nucleus) [Bovine herpesvirus type 1.1]
Length = 683
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
SC IC + ++ PC H +C ACI R+ + CPLC A ++ +
Sbjct: 12 SCCICLDAITGAARALPCLHAFCLACIRRWLEGRPTCPLCKAPVQSL 58
>gi|300798556|ref|NP_001178063.1| LON peptidase N-terminal domain and RING finger protein 3 [Bos
taurus]
gi|296471329|tpg|DAA13444.1| TPA: LON peptidase N-terminal domain and ring finger 3 isoform 2
[Bos taurus]
Length = 759
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 548
>gi|395502171|ref|XP_003755457.1| PREDICTED: polycomb group RING finger protein 6 [Sarcophilus
harrisii]
Length = 229
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C IC+ L + + T C H +CK+CI R CP C + + I D L
Sbjct: 11 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQL 70
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 71 QDIVYKLV 78
>gi|390342074|ref|XP_781711.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Strongylocentrotus purpuratus]
Length = 465
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 26/146 (17%)
Query: 15 ASPRKPGENSNKYPAECPFSKARPDDAASRKAVENSAKPQAEHDGDKAKSDSMDSASIPP 74
+SP K N+++ FS D ++K + + Q + D + + + +
Sbjct: 154 SSPVKHNLNTSRTLDRRKFSPV--DRKYTKKRLPSQTDEQFQPITDGSSPHTENQSKRFK 211
Query: 75 KCPF--------GYDAQSFKIGP---LSCMICQALLFECSKC---------TPCSHVYCK 114
KCP G Q K GP + I + FECS C TPC H +C+
Sbjct: 212 KCPLSMLESRVSGEKEQVAKPGPGYKIPLDIIEKADFECSLCLRLFYQPTTTPCGHTFCR 271
Query: 115 ACISRFKD----CPLCGADIEKIEAD 136
C+ R D CPLC + ++ AD
Sbjct: 272 GCLDRCLDYSQACPLCKQSLTEVSAD 297
>gi|344292022|ref|XP_003417727.1| PREDICTED: RING finger protein 151-like [Loxodonta africana]
Length = 303
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 79 GYDAQSFKIGP---LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADI- 130
GYD F P C IC +L + PCSH++CK CI R+ K CP C ++
Sbjct: 59 GYDLNLFTSPPDCNFLCSICHGVLKRPVR-LPCSHIFCKKCIVRWLARQKTCPCCRKEVK 117
Query: 131 -EKIEADTTLQDVVDRF 146
+++ L+ V+ R
Sbjct: 118 WKRMVHVNKLRKVIGRL 134
>gi|340375861|ref|XP_003386452.1| PREDICTED: polycomb group RING finger protein 1-like [Amphimedon
queenslandica]
Length = 238
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
++C +C L + + C H +CK CI ++ CP+C + + I D T+
Sbjct: 9 ITCSLCAGYLIDATTIIECLHTFCKTCIVKYLQNCNSCPVCNTVVHETQPLLNIRPDRTM 68
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 69 QDIVYKLV 76
>gi|440679949|ref|YP_007154744.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428677068|gb|AFZ55834.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 1249
Score = 41.6 bits (96), Expect = 0.72, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 19/136 (13%)
Query: 228 SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKY 287
S+ VL +G ++G+ A+ Y+ SV ++ E I ++ + +
Sbjct: 608 SREALVLNNIGGIYSSLGETQKALEYYQQSVFLAQQMGEKGSEAIF-----IHNVASIYS 662
Query: 288 YGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVA---VSLAKVADVDRSIGNEDVAV 344
G+ Q A YY +SL ++R QV D A +SL VA++ R +GN A+
Sbjct: 663 STGEKQKALDYYNQSLVLKR-----------QVQDQAGESLSLYNVAELQRDLGNYQQAL 711
Query: 345 DGFQEAIKRLESLTLK 360
+ AIK +E L K
Sbjct: 712 TSIETAIKIVEKLRTK 727
>gi|9629879|ref|NP_045363.1| ubiquitin E3 ligase ICP0 [Bovine herpesvirus 1]
gi|124136|sp|P29128.1|ICP0_BHV1J RecName: Full=E3 ubiquitin-protein ligase ICP0; AltName: Full=IER
2.9/ER2.6; AltName: Full=P135 protein
gi|330770|gb|AAA46062.1| p135 protein [Bovine herpesvirus 1]
gi|2653352|emb|CAA06138.1| immediate-early transactivator protein with Zn finger (cell
nucleus) [Bovine herpesvirus type 1.1]
Length = 676
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
SC IC + ++ PC H +C ACI R+ + CPLC A ++ +
Sbjct: 12 SCCICLDAITGAARALPCLHAFCLACIRRWLEGRPTCPLCKAPVQSL 58
>gi|260942169|ref|XP_002615383.1| hypothetical protein CLUG_04265 [Clavispora lusitaniae ATCC 42720]
gi|238850673|gb|EEQ40137.1| hypothetical protein CLUG_04265 [Clavispora lusitaniae ATCC 42720]
Length = 461
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRFK-----DCPLCGADIEKIEADTT-----LQ 140
SC IC ++ ++ + C H++C C+ + K DCPLC ++AD++ +
Sbjct: 367 SCPICMSIAYKPIRL-ECGHIFCVRCLVKMKKRGKTDCPLCRCQEAILKADSSNLDLEIM 425
Query: 141 DVVDRFIEGHARIKRSHTNSDKEEDEAGENK 171
D++ RF + K +K ++ GE+K
Sbjct: 426 DLIQRFFPMEVKEKMKEIKDEKYKEVVGEHK 456
>gi|149744893|ref|XP_001487934.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Equus caballus]
Length = 716
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 416 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 474
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 475 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 505
>gi|119175097|ref|XP_001239833.1| hypothetical protein CIMG_09454 [Coccidioides immitis RS]
Length = 320
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIE--KIEADTTLQDVV 143
L C +C+ L F+ T C H +C CI R CP C AD + K+ + + +VV
Sbjct: 28 LRCQVCKDL-FKNPVTTSCCHTFCSICIRRCLSADGKCPTCRADDQAVKLRQNWAVDEVV 86
Query: 144 DRF------IEGHARIKRSHTNSDKEEDEAGENKKV--IYEDVSMERG 183
D F + G AR + NSD E + +++ + + S E G
Sbjct: 87 DSFRQVRGDLLGFARNLSAGPNSDSREARIPKKRRIEEMQDATSQENG 134
>gi|426257665|ref|XP_004022445.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Ovis aries]
Length = 718
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 507
>gi|403362268|gb|EJY80857.1| Ring domain protein [Oxytricha trifallax]
Length = 803
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI--------SRFKDCPLC-----GADIEKIEAD 136
L+C +C+ + + C YCK C+ +R+K CP C G +E + D
Sbjct: 551 LTCWLCKGVYRDAHTINECMCTYCKGCVFKYYSDNPTRYK-CPQCQSELGGKPLETVVKD 609
Query: 137 TTLQDVVDRFI 147
LQ++VD I
Sbjct: 610 QVLQNIVDSLI 620
>gi|296202059|ref|XP_002748247.1| PREDICTED: E3 ubiquitin-protein ligase RNF135 [Callithrix jacchus]
Length = 430
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD---------CPLC---GADIEKIEADT 137
L C+ICQ LL + PC H +C+ C+ CP C A ++ +T
Sbjct: 21 LGCIICQGLL-DWPATLPCGHSFCRRCLESLWGARAAGGRWACPTCREVAAQQPRLRKNT 79
Query: 138 TLQDVVDRF 146
LQD+ D++
Sbjct: 80 LLQDLADKY 88
>gi|403369258|gb|EJY84471.1| zf-C3HC4 domain containing protein [Oxytricha trifallax]
Length = 517
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACI---SRFKD-CPLCGADIEKI 133
C IC + + +K C H+YC++CI +RF + CPLC +I KI
Sbjct: 12 CSICLETIQQKAKPEECQHIYCQSCILSWTRFSNVCPLCKVEITKI 57
>gi|335306474|ref|XP_003135396.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Sus scrofa]
Length = 752
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 452 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 510
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 511 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 541
>gi|376002390|ref|ZP_09780225.1| TPR repeat containing protein (tetratricopeptide) [Arthrospira sp.
PCC 8005]
gi|375329270|emb|CCE15978.1| TPR repeat containing protein (tetratricopeptide) [Arthrospira sp.
PCC 8005]
Length = 2054
Score = 41.6 bits (96), Expect = 0.73, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 215 DQIERMGNTS-ELCSQLGAVLGM------LGDCCRAMGDADAAVAYFADSVEFLMKLPMD 267
+Q ER+ S +L +LG GM LGD R G+ D A + S+E ++ +D
Sbjct: 1235 NQAERLYRQSLQLRIELGDRAGMATSWGVLGDIQRNRGNWDEAEHLYRQSLE--LRYELD 1292
Query: 268 DLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSL 327
D + I T S ++GD++ + G+ A Y +SL + + R L +A+S
Sbjct: 1293 DRQGIAT---SWGQLGDIQRFRGNWDEAERLYQQSLALFTELGDR--------LMMAISW 1341
Query: 328 AKVADVDRSIGNEDVAVDGFQEAI 351
++ D+ R+ GN + A FQ+ +
Sbjct: 1342 GQLGDIQRNRGNWNEAERLFQQCL 1365
>gi|170595781|ref|XP_001902517.1| B-box zinc finger family protein [Brugia malayi]
gi|158589770|gb|EDP28636.1| B-box zinc finger family protein [Brugia malayi]
Length = 445
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 88 GPLSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIE-KIEADTTLQDVVD 144
PL C+IC F PC H YC+ CI K CP+CGA ++ ++ D L ++D
Sbjct: 19 NPLECLICDRE-FSSPVRLPCQHNYCRECIQNNKTCPVCGAAVDGEVCPDNLLSFLID 75
>gi|153873236|ref|ZP_02001885.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS]
gi|152070298|gb|EDN68115.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS]
Length = 708
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 248 DAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRR 307
+ AV Y+ D++E L + ++DL ++H N++G++ GDL+ A +Y ++R
Sbjct: 589 NEAVKYYQDALELLPENAVNDLAVVH------NQLGNIYRNVGDLEQALYHYRE--DIRY 640
Query: 308 DAVKRHSNVPSQV-LDVAVSLAKVADVDRSIGNEDVAVDGFQ-------EAIKRLESLTL 359
D + + Q +VAV+LAK + ++ A+ FQ E IK+ E L
Sbjct: 641 DEMAGNIYGAGQTRFNVAVALAKANRLPDALEYARAALRNFQSYSQGTEEDIKKTEGLIE 700
Query: 360 KPEEA 364
K E+A
Sbjct: 701 KIEQA 705
>gi|149744890|ref|XP_001487924.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Equus caballus]
Length = 757
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 457 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 515
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 516 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 546
>gi|386829523|ref|ZP_10116630.1| hypothetical protein BegalDRAFT_3419 [Beggiatoa alba B18LD]
gi|386430407|gb|EIJ44235.1| hypothetical protein BegalDRAFT_3419 [Beggiatoa alba B18LD]
Length = 1217
Score = 41.6 bits (96), Expect = 0.74, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 243 AMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAARSYYVRS 302
+ GD + A ++ S+ K+ D +++SLN IG L Y GD A+ YY R+
Sbjct: 580 STGDYEQAEKHYKRSLNIWEKVLGKDHP---RVALSLNNIGWLYYSLGDYAKAKPYYERA 636
Query: 303 LNVRRDAV-KRHSNVPSQVLDVAVSLAKVADVDRSIGN 339
L +R A+ K H D+A SL + ++++ +GN
Sbjct: 637 LTIREKALGKEHP-------DIAQSLNGLGELNQQLGN 667
>gi|21750228|dbj|BAC03744.1| unnamed protein product [Homo sapiens]
gi|119610293|gb|EAW89887.1| LON peptidase N-terminal domain and ring finger 3, isoform CRA_c
[Homo sapiens]
Length = 610
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|266331|sp|P29836.1|ICP0_BHV1K RecName: Full=E3 ubiquitin-protein ligase ICP0; AltName: Full=IER
2.9/ER2.6; AltName: Full=P135 protein
gi|330768|gb|AAA46061.1| p135 protein [Bovine herpesvirus 1]
Length = 676
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 91 SCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
SC IC + ++ PC H +C ACI R+ + CPLC A ++ +
Sbjct: 12 SCCICLDAITGAARALPCLHAFCLACIRRWLEGRPTCPLCKAPVQSL 58
>gi|429852850|gb|ELA27965.1| DNA repair protein [Colletotrichum gloeosporioides Nara gc5]
Length = 450
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIE--KIEADTTLQDVV 143
L C +C+ F+ T C H +C CI R CPLC A + K+ ++ ++++V
Sbjct: 29 LRCQVCKDF-FKTPMLTSCCHTFCSLCIRRALSNEGKCPLCRASDQELKLRSNWAMEEIV 87
Query: 144 DRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVSME 181
+ F + ++S + +A +K++ ED + E
Sbjct: 88 ESFTKA----RKSTLEFARTAGQASPKRKLVEEDSAPE 121
>gi|410917354|ref|XP_003972151.1| PREDICTED: nuclear factor 7, brain-like [Takifugu rubripes]
Length = 624
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 14/70 (20%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----------CPLCGADIEK---IEAD 136
+C IC + FE TPC H +C+ CIS + D CP+C K + +
Sbjct: 13 FTCSICLEV-FENPVSTPCGHSFCQRCISSYWDGGRGGNRVYFCPICKESFRKRPELHIN 71
Query: 137 TTLQDVVDRF 146
TL+++ ++F
Sbjct: 72 RTLKEITEQF 81
>gi|332226230|ref|XP_003262292.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Nomascus leucogenys]
Length = 502
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 202 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 260
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 261 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 291
>gi|449474913|ref|XP_002195040.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Taeniopygia guttata]
Length = 525
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 34 SKARPDDAA-SRKAVENSAKPQAEHDGDKAKSDSMDSASIPPKCPFGYDAQSFKIGPLSC 92
S+ R D A S+ + + AE G + ++A+ KC +S + L C
Sbjct: 163 SEHRQDTAVLSQPGQQPEPETSAETQGQGLLDNKEETAAA--KCTQPCLGESLSVSDLEC 220
Query: 93 MICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIE------KIEADTTLQDV 142
+C + FE TPC H +CK C+ R D CPLC + + LQD+
Sbjct: 221 SLCIRMFFE-PVTTPCGHTFCKECLERCLDHRPNCPLCKQSLREYLKAGRYSPTVLLQDI 279
Query: 143 V 143
+
Sbjct: 280 M 280
>gi|402871661|ref|XP_003899772.1| PREDICTED: E3 ubiquitin-protein ligase RNF180-like [Papio anubis]
Length = 122
Score = 41.6 bits (96), Expect = 0.76, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF-KD------CPLCGADIEKIEADTTLQDVVD 144
C +C + F C PC H++C+ C+ KD CPLC I ++ T L +
Sbjct: 24 CAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTIISRVFFQTELNNATK 83
Query: 145 RFI-EGHARIKRSHTNSD 161
F + + +IK+S S+
Sbjct: 84 TFFTKEYLKIKQSFQKSN 101
>gi|397482971|ref|XP_003812683.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 3 [Pan paniscus]
Length = 610
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|405380022|ref|ZP_11033867.1| hypothetical protein PMI11_03850, partial [Rhizobium sp. CF142]
gi|397323637|gb|EJJ28030.1| hypothetical protein PMI11_03850, partial [Rhizobium sp. CF142]
Length = 538
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQAAR 296
LGD A+G+ A+ F +++ K + +SV ++IGD++ GGD A
Sbjct: 420 LGDEYVAIGERREALNTFNTALQVAQKFSGE-----REISVCYDRIGDMRQAGGDTAGAL 474
Query: 297 SYYVRSLNVRRDAVKRH-SNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAI 351
+ L + R +R SNV Q D+++S K+ D+ ++ G+ A++ +Q ++
Sbjct: 475 EAHQAGLEIARTLAERDPSNVDWQ-RDLSISHNKIGDIRKAGGDTAGALEAYQASL 529
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 237 LGDCCRAMGDADAAVAYFADSVEFLMKLPMDD---LEIIHTLSVSLNKIGDLKYYGGDLQ 293
+GD +A GD A+ +E L D ++ LS+S NKIGD++ GGD
Sbjct: 460 IGDMRQAGGDTAGALEAHQAGLEIARTLAERDPSNVDWQRDLSISHNKIGDIRKAGGDTA 519
Query: 294 AARSYYVRSLNVRRDAVKR 312
A Y SL++R+ +R
Sbjct: 520 GALEAYQASLDIRKTLAER 538
>gi|194679204|ref|XP_001788603.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1, partial [Bos taurus]
Length = 645
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD------ 136
+ C +C L FE TPC H +CK C+ R D CPLC +++ AD
Sbjct: 346 VSDFECSLCMRLFFE-PVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVT 404
Query: 137 TTLQDVVDRFI 147
L+D++ +++
Sbjct: 405 QLLEDLIVKYL 415
>gi|296471328|tpg|DAA13443.1| TPA: LON peptidase N-terminal domain and ring finger 3 isoform 1
[Bos taurus]
Length = 718
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 418 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 476
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 477 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 507
>gi|408391696|gb|EKJ71065.1| hypothetical protein FPSE_08729 [Fusarium pseudograminearum CS3096]
Length = 432
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 64 SDSMDSASIPPKCPFGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRF--- 120
SDS D + P A + G L C +C+ ++ T CSH +C CI R
Sbjct: 7 SDSTDWLTTP------LSALAAVEGALRCQVCKDF-YKTPMITNCSHTFCSLCIRRALSN 59
Query: 121 -KDCPLCGADIE--KIEADTTLQDVVDRFI 147
CPLC A + K+ ++ +L++ V F+
Sbjct: 60 DGKCPLCRATEQENKLRSNWSLEEAVQAFV 89
>gi|395754353|ref|XP_003779759.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Pongo abelii]
Length = 610
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLVSRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|335306476|ref|XP_003360480.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Sus scrofa]
Length = 711
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 411 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 469
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 470 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 500
>gi|427729515|ref|YP_007075752.1| hypothetical protein Nos7524_2312 [Nostoc sp. PCC 7524]
gi|427365434|gb|AFY48155.1| TPR repeat-containing protein [Nostoc sp. PCC 7524]
Length = 835
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 17/130 (13%)
Query: 230 LGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYG 289
+G L LG+ R++G+ A+ ++ S+E EI V + IG YG
Sbjct: 475 VGISLNNLGNAYRSLGEYQRAIEFYQQSLEI-------SREIGDHNCVGSSLIGLGNAYG 527
Query: 290 --GDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGF 347
G+ Q A +Y +SL + R + H+ V + SL + +V RS+G A++ F
Sbjct: 528 CLGEYQRAIEFYQQSLEISR-GIGDHNGVGN-------SLGSLGNVYRSLGEYQRAIELF 579
Query: 348 QEAIKRLESL 357
Q++++ L +
Sbjct: 580 QQSLEILREI 589
>gi|403371825|gb|EJY85797.1| SPRY domain containing protein [Oxytricha trifallax]
Length = 392
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 79 GYDAQSFKIGP--------LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLC 126
GYD+ S I L C IC + + +C C+ ++CK CI + K+CP+C
Sbjct: 8 GYDSDSIGIFNIPKEFTRFLQCQICFKVARDAKECDYCNQLFCKRCIENWLILNKNCPMC 67
Query: 127 GADIEKIEADTTLQDVVDRF 146
DI A +++++ F
Sbjct: 68 HRDIRIRGASRVVKEIIQSF 87
>gi|402899276|ref|XP_003912629.1| PREDICTED: E3 ubiquitin-protein ligase RNF135 [Papio anubis]
Length = 435
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI---------SRFKDCPLC---GADIEKIEADT 137
L C+ICQ LL + PC H +C+ C+ R CP C A ++ +T
Sbjct: 21 LGCIICQELL-DWPATLPCGHSFCRHCLEGLWGARGAGRRWACPTCREGAAQQPRLRKNT 79
Query: 138 TLQDVVDRF 146
LQD+ D++
Sbjct: 80 LLQDLADKY 88
>gi|332861515|ref|XP_003317700.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Pan troglodytes]
Length = 610
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 459 SFDASDLECALCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 517
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 518 SKNVIMEELIAKFLPEELKERRKLYEEEMEE 548
>gi|297491233|ref|XP_002698738.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1, partial [Bos taurus]
gi|296472403|tpg|DAA14518.1| TPA: LON peptidase N-terminal domain and ring finger 1 [Bos taurus]
Length = 638
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD------ 136
+ C +C L FE TPC H +CK C+ R D CPLC +++ AD
Sbjct: 339 VSDFECSLCMRLFFE-PVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVT 397
Query: 137 TTLQDVVDRFI 147
L+D++ +++
Sbjct: 398 QLLEDLIVKYL 408
>gi|397510729|ref|XP_003825743.1| PREDICTED: polycomb group RING finger protein 6 [Pan paniscus]
Length = 251
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLCGADIEK------IEADTTL 139
+ C IC+ L + + T C H +CK+CI R CP C + + I D L
Sbjct: 71 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQL 130
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 131 QDIVYKLV 138
>gi|325090513|gb|EGC43823.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Ajellomyces capsulatus H88]
Length = 420
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 14/139 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRF----KDCPLC-GADIE-KIEADTTLQDVV 143
L C +C+ F T CSH +C CI R CP C AD E K+ D +Q++V
Sbjct: 25 LRCQVCKDF-FRSPVITSCSHTFCSICIRRCLSSDGKCPACRTADQELKLRKDMAMQEMV 83
Query: 144 DRFIEGHARI----KRSHTNSDKEEDE---AGENKKVIYEDVSMERGAFLVQQAMRAFRA 196
D F+ + + + +D+ E + K+ I VS+ V A R R
Sbjct: 84 DSFMSARPSVLEFARTATVRTDEPEGDLELPASKKRKIDTFVSLAEKGKAVSGAERRTRL 143
Query: 197 QNVESAKSRLSLCTEDIRD 215
Q+ S L E I D
Sbjct: 144 QSRRSEDQDLQTQAEVIDD 162
>gi|325089460|gb|EGC42770.1| ATP-dependent DNA helicase [Ajellomyces capsulatus H88]
Length = 1490
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 27/100 (27%)
Query: 92 CMICQALLFECSKCTPCSHVYCKACISRF----KDCPLC-----GADIEKIEADTTLQDV 142
C+ICQ+ FE T C H YC C+ + K CP+C G+D +I T ++
Sbjct: 1131 CVICQST-FEIGVLTVCGHKYCSDCLRSWWRQHKTCPMCKIRLKGSDFHQIAYKPT--EI 1187
Query: 143 V---DRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
V +R I H R D + +IY D+S
Sbjct: 1188 VAQEERSIAAHVR------------DSGHSLENLIYSDIS 1215
>gi|33337313|gb|AAQ13324.1| Mel-18 [Xenopus laevis]
Length = 54
Score = 41.2 bits (95), Expect = 0.78, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 108 CSHVYCKACISRF----KDCPLCGADIEK------IEADTTLQDVVDRFIEG 149
C H +CK CI R+ K CP+C + K I +D TLQD+V + + G
Sbjct: 2 CLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPG 53
>gi|348679876|gb|EGZ19692.1| hypothetical protein PHYSODRAFT_558391 [Phytophthora sojae]
Length = 463
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 84 SFKIGP--LSCMICQALLFECSKCTPCSHVYCKACIS-----RFKDCPLCGADIEKIEAD 136
+F++GP ++C IC + C+H +C +C+S RF+ CPLC D
Sbjct: 193 NFRLGPRAMTCPICLCSEVQAPITLSCAHTFCWSCLSRAAQHRFRSCPLCRRAQSVDPRD 252
Query: 137 TTLQDVVDRFIEGHARIKRS 156
+ +V RF + ++++
Sbjct: 253 YEIDGLVKRFKRAYEFVEQA 272
>gi|327277255|ref|XP_003223381.1| PREDICTED: polycomb group RING finger protein 3-like [Anolis
carolinensis]
Length = 242
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEK------IEADTTL 139
++C +C L + + T C H +C++C+ ++ + CP C I + I D T+
Sbjct: 15 ITCRLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTM 74
Query: 140 QDVVDRFI 147
QD+V + +
Sbjct: 75 QDIVYKLV 82
>gi|297700471|ref|XP_002827271.1| PREDICTED: E3 ubiquitin-protein ligase RNF135 isoform 1 [Pongo
abelii]
Length = 432
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACIS--------RFKDCPLC---GADIEKIEADTT 138
L C+ICQ LL + PC H +C+ C+ R CP C A ++ +T
Sbjct: 19 LGCIICQGLL-DWPATLPCGHSFCRHCLEGLWGARGVRRWACPTCRQGAAQQPQLRKNTL 77
Query: 139 LQDVVDRF 146
LQD+ D++
Sbjct: 78 LQDLADKY 85
>gi|156388938|ref|XP_001634749.1| predicted protein [Nematostella vectensis]
gi|156221836|gb|EDO42686.1| predicted protein [Nematostella vectensis]
Length = 99
Score = 41.2 bits (95), Expect = 0.78, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 92 CMICQALLFECSKCTPCSHVYCKAC----ISRFKDCPLCGADIEK------IEADTTLQD 141
C +C L T C H +CK+C IS CP+C I + I D T+QD
Sbjct: 14 CKLCNGYLINPVTITECIHTFCKSCLLRHISLVNRCPVCNEVIHETTPIYNIRVDRTMQD 73
Query: 142 VVDR 145
++++
Sbjct: 74 IINK 77
>gi|432846716|ref|XP_004065909.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Oryzias latipes]
Length = 741
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEA-----DTTLQ 140
L C +C L +E TPC H +CK C+ R D CPLC +++ A TT+
Sbjct: 445 LECSLCMRLFYE-PVTTPCGHTFCKNCLERCLDHTPHCPLCKESLKEYLACRKYMVTTVL 503
Query: 141 DVVDRFIEGHARIKRSHTNSDKEEDEAGENKKV 173
+V+ + H +R+ T+ ++ + + K V
Sbjct: 504 EVLIKQHLSHDYAERTKTHLEETREHSDLTKNV 536
>gi|350594537|ref|XP_003134232.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Sus scrofa]
Length = 897
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 27/100 (27%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD------TTL 139
C +C L FE TPC H +CK C+ R D CPLC +++ AD L
Sbjct: 601 FECSLCMRLFFE-PVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVTQLL 659
Query: 140 QDVVDRFIEGHARIKRSHTNSDKEEDEAGENKKVIYEDVS 179
+D++ +++ DE E KK+ E+ +
Sbjct: 660 EDLIVKYL----------------PDELSERKKIYDEETA 683
>gi|328790570|ref|XP_003251432.1| PREDICTED: TRAF-interacting protein-like [Apis mellifera]
Length = 388
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 55/235 (23%)
Query: 92 CMICQALLFECSKC--TPCSHVYCKACISRF----KDCPLCG---------------ADI 130
C+IC LL TPC H++ AC++++ K CP C A+
Sbjct: 5 CVICSDLLIPSDDVFYTPCGHIFHFACVTQWLERSKTCPHCRERTTLNKIHRIYFNFANS 64
Query: 131 EKIEADT-TLQDVVDRF----------IEGHA-RIKRSHTNSDKEEDEAGENKKVIYEDV 178
+ I DT +LQD +D+ I+ + +I+ + E G+ +K I E
Sbjct: 65 DAISEDTYSLQDKIDKLNFQLMLKEKDIKHYMEKIETLEKQKKGLKQEVGKTEKEIKEKT 124
Query: 179 SMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIRDQIERMGNTSELCSQLGAVLGMLG 238
S + +++ ++ F+ QN+E K + L E ++ +E N L L A + +
Sbjct: 125 S---TIYALKEQIKYFKEQNLEIEKIKKEL--EQLQKNVENYKNIKIL---LEASIEDVD 176
Query: 239 DCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
+ D + Y + +MK M ++SLNK +L+ LQ
Sbjct: 177 EMISRTNDPSTLITYIS-----VMKRQM---------TISLNKRRELRSNLRSLQ 217
>gi|440913153|gb|ELR62640.1| hypothetical protein M91_20015, partial [Bos grunniens mutus]
Length = 536
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD------ 136
+ C +C L FE TPC H +CK C+ R D CPLC +++ AD
Sbjct: 237 VSDFECSLCMRLFFE-PVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVT 295
Query: 137 TTLQDVVDRFI 147
L+D++ +++
Sbjct: 296 QLLEDLIVKYL 306
>gi|392577797|gb|EIW70926.1| hypothetical protein TREMEDRAFT_21645, partial [Tremella
mesenterica DSM 1558]
Length = 301
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 87 IGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
+G L C +C LL++ TPC H +C C+SR D CPLC D+ +
Sbjct: 6 MGMLECDVCAMLLYD-PVTTPCQHSFCSKCLSRSLDHSPRCPLCRQDLPSL 55
>gi|297272317|ref|XP_001112652.2| PREDICTED: RING finger protein 135-like [Macaca mulatta]
Length = 449
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI---------SRFKDCPLC---GADIEKIEADT 137
L C+ICQ LL + PC H +C+ C+ R CP C A ++ +T
Sbjct: 21 LGCIICQELL-DWPATLPCGHSFCRHCLEGLWGARGAGRRWACPTCREGAAQQPRLRKNT 79
Query: 138 TLQDVVDRF 146
LQD+ D++
Sbjct: 80 LLQDLADKY 88
>gi|260816970|ref|XP_002603360.1| hypothetical protein BRAFLDRAFT_80353 [Branchiostoma floridae]
gi|229288679|gb|EEN59371.1| hypothetical protein BRAFLDRAFT_80353 [Branchiostoma floridae]
Length = 1124
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 11/190 (5%)
Query: 165 DEAGENKKVIYEDVSMERGAFLVQQAMRAFRAQNVESAKSRLSLCTEDIR-DQIERMGNT 223
+E +N + + + SM Q + QN+ K +S + ++ D+I NT
Sbjct: 625 EELLQNYQTRFGEASMHSDIVQTLQKL-GIACQNIGEHKKAVSYHEQSLQMDRIIHGENT 683
Query: 224 SELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIH-TLSVSLNKI 282
+ + + L LG R +GD A Y+ S++ MK + H ++ SLN +
Sbjct: 684 AH--PDIASSLNNLGSAWRHLGDHKKAAIYYEQSLQ--MKRIIHGDNTAHPDIASSLNNL 739
Query: 283 GDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDV 342
G GD + A SY+ +SL + R ++ P D+A SL + + +G+
Sbjct: 740 GVAWSNLGDCKKAVSYHKQSLQMERTIYGENTAHP----DIASSLGNLGNAWMDLGDYKN 795
Query: 343 AVDGFQEAIK 352
AV +++++
Sbjct: 796 AVSYHEQSLQ 805
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 18/140 (12%)
Query: 208 LCTEDIRDQIERMGNTSELCSQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMD 267
+C E++ + + + S + L LG C+ +G+ AV+Y S L MD
Sbjct: 622 ICLEELLQNYQTRFGEASMHSDIVQTLQKLGIACQNIGEHKKAVSYHEQS------LQMD 675
Query: 268 DLEIIHT-------LSVSLNKIGDLKYYGGDLQAARSYYVRSLNVRR---DAVKRHSNVP 317
IIH ++ SLN +G + GD + A YY +SL ++R H ++
Sbjct: 676 --RIIHGENTAHPDIASSLNNLGSAWRHLGDHKKAAIYYEQSLQMKRIIHGDNTAHPDIA 733
Query: 318 SQVLDVAVSLAKVADVDRSI 337
S + ++ V+ + + D +++
Sbjct: 734 SSLNNLGVAWSNLGDCKKAV 753
>gi|328701611|ref|XP_003241657.1| PREDICTED: hypothetical protein LOC100573034 [Acyrthosiphon pisum]
Length = 420
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 28/151 (18%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEADTTLQDVVDR 145
L C IC + + CSH +C++CI + D CP+C +++ TL+ +++
Sbjct: 268 LLCNICFEIFIK-PTVLNCSHTFCESCIYIWTDRVIACPICRVEVQSKSYCLTLESFIEK 326
Query: 146 FIEGHARIKRSHTNSDKEEDEAGENKKVIYED---VSMERGAFLVQQAMRAFRAQNV--E 200
+E + E + ++V +D + +ER L +++ R F AQ + E
Sbjct: 327 IVEHLPK-------------EIKDKREVAIKDRNNIKIERPHRLNRRSTRTFNAQVLVDE 373
Query: 201 SAKSRLSLCTEDIRDQIERMGNTSELCSQLG 231
S R++L D + G + L S +G
Sbjct: 374 SELFRMNL-----HDTVVSTGGVNPLMSYIG 399
>gi|67593286|ref|XP_665709.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656518|gb|EAL35482.1| hypothetical protein Chro.10374, partial [Cryptosporidium hominis]
Length = 278
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-----SRFKDCPLCGADI-----EKIEADTTL 139
L C IC+ + C H +CKACI S+ +CP CG +I + + D T+
Sbjct: 45 LICPICEGFFRGATTIRECLHTFCKACIIEHIESKGAECPKCGQNIGIYPLQGLVFDRTI 104
Query: 140 QDVVDR 145
Q++ D+
Sbjct: 105 QNITDK 110
>gi|261331920|emb|CBH14914.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 339
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKDCPLCGADIEKIE-ADTTLQDVVDRFIE 148
++C IC + + PC+H++C+ C+S CP+C A++ + A+ L D ++
Sbjct: 9 VACAICLEQWSDPVELLPCTHIFCRGCVSTATVCPICRAEVTGLRTANRYLVDASMSLVK 68
Query: 149 GHARIKRSHTNSDKEEDEAGENKK 172
R +++ ++K +E E +
Sbjct: 69 MKERDEKAREEAEKLLNEVIEQSQ 92
>gi|260825582|ref|XP_002607745.1| hypothetical protein BRAFLDRAFT_82807 [Branchiostoma floridae]
gi|229293094|gb|EEN63755.1| hypothetical protein BRAFLDRAFT_82807 [Branchiostoma floridae]
Length = 990
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVE-----FLMKLPMDDLEIIHTLSVSLNKIGDLKYY 288
LG L +GD A++Y+ +++ + P D+ ++ L+K+G L
Sbjct: 798 LGNLESAWEDLGDYSKAISYYEQALQIHRIIYGQTTPHLDVAVL------LSKLGTLNDG 851
Query: 289 GGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQ 348
GD + A SYY ++L + R + + P +VA L + D +G+ A+ +Q
Sbjct: 852 LGDYKKAISYYEQALQICRRIYGQTTAHP----NVASLLHNLGDAWHRLGDHRKAISNYQ 907
Query: 349 EAIKRLESL 357
+A++ S+
Sbjct: 908 QALQMFRSI 916
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 234 LGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHTLSVSLNKIGDLKYYGGDLQ 293
L LG+ R +GD A++Y ++++ + K H ++ SL + GD
Sbjct: 754 LHNLGEVSRDLGDYRKAISYHEEALQ-MKKTIYGKSTAHHGIAKSLGNLESAWEDLGDYS 812
Query: 294 AARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDVAVDGFQEAIK 352
A SYY ++L + R + P LDVAV L+K+ ++ +G+ A+ +++A++
Sbjct: 813 KAISYYEQALQIHR--IIYGQTTPH--LDVAVLLSKLGTLNDGLGDYKKAISYYEQALQ 867
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 228 SQLGAVLGMLGDCCRAMGDADAAVAYFADSVEFLMKLPMDDLEIIHT-----LSVSLNKI 282
S + L LG +GD A++Y M L M H+ ++ LN +
Sbjct: 660 SDIAESLNSLGVAWYHLGDHKKAISYLQ------MALQMSKDIYGHSTAHPRIATPLNNL 713
Query: 283 GDLKYYGGDLQAARSYYVRSLNVRRDAVKRHSNVPSQVLDVAVSLAKVADVDRSIGNEDV 342
G + GD A S Y ++L +RR + + LD+A SL + +V R +G+
Sbjct: 714 GSAWCHLGDHTKAISCYEQALKIRRTIYGK----DAAHLDIATSLHNLGEVSRDLGDYRK 769
Query: 343 AVDGFQEAIK 352
A+ +EA++
Sbjct: 770 AISYHEEALQ 779
>gi|119917044|ref|XP_607236.3| PREDICTED: tripartite motif-containing protein 72 [Bos taurus]
Length = 482
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD---------CPLCGADIEKIEADTTLQ 140
LSC +C L F+ C H +C+AC+SR CP C A T LQ
Sbjct: 12 LSCPLCLQL-FDAPVTAECGHSFCRACLSRVAGEPAADGTVLCPSCQAPTRPQALSTNLQ 70
Query: 141 DVVDRFIEGHARIKRSH 157
+ R +EG A++ + H
Sbjct: 71 --LARLVEGLAQVPQGH 85
>gi|66362364|ref|XP_628146.1| ring domain protein [Cryptosporidium parvum Iowa II]
gi|46227384|gb|EAK88319.1| ring domain protein [Cryptosporidium parvum Iowa II]
Length = 284
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI-----SRFKDCPLCGADI-----EKIEADTTL 139
L C IC+ + C H +CKACI S+ +CP CG +I + + D T+
Sbjct: 45 LICPICEGFFRGATTIRECLHTFCKACIIEHIESKGAECPKCGQNIGIYPLQGLVFDRTI 104
Query: 140 QDVVDR 145
Q++ D+
Sbjct: 105 QNITDK 110
>gi|351710907|gb|EHB13826.1| LON peptidase and RING finger protein 3 [Heterocephalus glaber]
Length = 597
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 84 SFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADI------EKI 133
SF L C +C L +E TPC H +C C+ R D CPLC + K
Sbjct: 297 SFDASDLECSLCMRLFYE-PVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKY 355
Query: 134 EADTTLQDVVDRFIEGHARIKRSHTNSDKEE 164
+ +++++ +F+ + +R + EE
Sbjct: 356 SKNVIMEELIAKFLPEELKERRRLYEEEMEE 386
>gi|297822773|ref|XP_002879269.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297325108|gb|EFH55528.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 420
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACI------SRFKDCPLC-----GADIEKIEADTT 138
++C +C+ LL + + + C H +C+ CI + CP+C G +EK+ D
Sbjct: 18 MTCSLCEKLLRDATTISECLHTFCRKCIYEKITEDEIECCPVCDIDLGGTPLEKLRPDHI 77
Query: 139 LQDV 142
LQD+
Sbjct: 78 LQDL 81
>gi|293349746|ref|XP_001058206.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Rattus norvegicus]
gi|293361640|ref|XP_237078.5| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Rattus norvegicus]
Length = 857
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 78 FGYDAQSFKIGPLSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKI 133
F DA F+ C +C LLFE TPC H +C C+ R D CPLC + ++
Sbjct: 543 FTIDATDFE-----CALCMRLLFE-PVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSEL 596
Query: 134 EADTTLQDVV 143
A V
Sbjct: 597 LATRNFNVTV 606
>gi|291409154|ref|XP_002720877.1| PREDICTED: LON peptidase N-terminal domain and ring finger 1
[Oryctolagus cuniculus]
Length = 808
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 90 LSCMICQALLFECSKCTPCSHVYCKACISRFKD----CPLCGADIEKIEAD 136
C +C L FE TPC H +CK C+ R D CPLC +++ AD
Sbjct: 512 FECSLCMRLFFE-PVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLAD 561
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,902,253,301
Number of Sequences: 23463169
Number of extensions: 233766295
Number of successful extensions: 804709
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 2266
Number of HSP's that attempted gapping in prelim test: 801397
Number of HSP's gapped (non-prelim): 4150
length of query: 392
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 248
effective length of database: 8,980,499,031
effective search space: 2227163759688
effective search space used: 2227163759688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)