BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016264
(392 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis
thaliana GN=At1g22950 PE=2 SV=2
Length = 397
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 213/348 (61%), Positives = 277/348 (79%), Gaps = 2/348 (0%)
Query: 46 RLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQ 105
+LR P+++H+PE+Y+D+ LD+SPS+F+SLERYLP +L R +K FMR++L++Y P
Sbjct: 39 KLRRTPNEEHEPENYEDLPLDYSPSLFTSLERYLPEQLLNSTRIDKASFMRDLLLRYSPD 98
Query: 106 GERTR--RHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPS 163
ER R RH++YR KI+++YQ LH E+Y L +FF P F+ A +E +FRS + E
Sbjct: 99 TERVRVLRHKEYRDKIMSSYQRLHGEIYTLDPSSFFAPSFLGAFSRKSEPNFRSSMVESY 158
Query: 164 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKL 223
PG+FTFEM +P+FCE+LLAEVE+ EKWV +++ IMRPNTMN +G VLDDFG ++ML KL
Sbjct: 159 PGIFTFEMFKPQFCEMLLAEVEHMEKWVYDSRSTIMRPNTMNNFGVVLDDFGFDSMLQKL 218
Query: 224 METYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTG 283
++ +I P+++V F EV G++LDSHHG++VEYGKDRDVDLGFHVDDSEV+LNVCLGKQF+G
Sbjct: 219 VDDFISPIAQVLFPEVCGTSLDSHHGYIVEYGKDRDVDLGFHVDDSEVSLNVCLGKQFSG 278
Query: 284 GELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCR 343
GEL+FRG RC+KHVN+ S +E++DYSHVPG A+LHRGRHRHGARATTSGHR NL+LWCR
Sbjct: 279 GELYFRGVRCDKHVNSDSTEKEVYDYSHVPGHAILHRGRHRHGARATTSGHRANLILWCR 338
Query: 344 SSVFREMKRYQKDFSSWCGECFREKKERQRLSIAATKSELLKQEGEST 391
SS FREMK YQ+DFS WCG C +K+ RQR SI ATK L ++ E T
Sbjct: 339 SSTFREMKNYQRDFSGWCGGCKLDKQRRQRDSINATKEILARKAAEKT 386
>sp|Q28C22|OGFD2_XENTR 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Xenopus tropicalis GN=ogfod2 PE=2 SV=1
Length = 349
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 145/267 (54%), Gaps = 25/267 (9%)
Query: 95 MREILMKYLPQGERTRR------HRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAI- 147
R +L + ER R+ HR R++I +Y+PL+ E+Y L +F F+ A+
Sbjct: 55 FRNVLETIKKEVERRRKLGEESLHR--RREISLHYKPLYPEVYVLQ-ESFLAAEFLTAVK 111
Query: 148 -----QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPN 202
Q N E + S ++ + P FC L+ E+ENFE+ + RPN
Sbjct: 112 YSKSPQANVEGLLHHLHSITDKRIYRLPVFIPEFCAKLVEELENFER----SDLPKGRPN 167
Query: 203 TMNKYGAVLDDFG-LETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVD 261
TMN YG +L++ G ++ + L E YI PL+ + F + GG LDSH FVV+Y D+D
Sbjct: 168 TMNNYGILLNELGFVDALTAPLCEKYIEPLTSLLFPDWGGGCLDSHRAFVVKYALQEDLD 227
Query: 262 LGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRG 321
L H D++EVTLNV LGK+FT G L+F + E VN + E H+ G+ +LHRG
Sbjct: 228 LSCHYDNAEVTLNVSLGKEFTDGNLYFSDMK-EVPVNERTYAE----VEHITGQGILHRG 282
Query: 322 RHRHGARATTSGHRVNLLLWCRSSVFR 348
+H HGA +SG R NL+LW R+S R
Sbjct: 283 QHVHGALPISSGERWNLILWMRASDVR 309
>sp|A3KGZ2|OGFD2_DANRE 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Danio rerio GN=ogfod2 PE=2 SV=1
Length = 345
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 146/261 (55%), Gaps = 21/261 (8%)
Query: 96 REILMKYLPQGERTRRHR---DYRQKIITN-YQPLHRELYNLHIGNFFVPPFVKAI---- 147
R+++ K + ER + H+ R +I Y PLH+ +Y+L +F P ++ +
Sbjct: 52 RDVIGKIQAEIERRQNHKLKSTERAAVIKEIYTPLHQHVYHLQ-ESFLAPELLEMVKYCA 110
Query: 148 --QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMN 205
+ N + + I +E + VF F++ + FC+ LL E+E+FE ++ RPNTMN
Sbjct: 111 SSEANVQGLLKLIQTEAASRVFRFQVFRKEFCKDLLEELEHFE----QSDAPKGRPNTMN 166
Query: 206 KYGAVLDDFGL-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGF 264
YG VL++ G E + L E Y+RPL+ + +++ GG+ LDSH FVV+Y D++L +
Sbjct: 167 NYGIVLNELGFDEGFITPLREVYLRPLTALLYSDCGGNCLDSHKAFVVKYDMHEDLNLSY 226
Query: 265 HVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHR 324
H D+SEVTLNV LGK FT G LFF R E + H +LHRG+H
Sbjct: 227 HYDNSEVTLNVSLGKDFTEGNLFFGDMR-----QVPLSETECVEVEHRVTEGLLHRGQHM 281
Query: 325 HGARATTSGHRVNLLLWCRSS 345
HGA + +SG R NL++W R+S
Sbjct: 282 HGALSISSGTRWNLIIWMRAS 302
>sp|Q6N063|OGFD2_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Homo sapiens GN=OGFOD2 PE=2 SV=2
Length = 350
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 30/259 (11%)
Query: 119 IITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE---------ESFRSIISEPSPGVFTF 169
I ++Y P E+Y+ P F+ + + + ++ E ++
Sbjct: 85 IASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPDADLKGLLQRLETVSEEKR--IYRV 142
Query: 170 EMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGL-ETMLDKLMETYI 228
+ FC+ LL E+E+FE ++ RPNTMN YG +L + GL E ++ L E ++
Sbjct: 143 PVFTAPFCQALLEELEHFE----QSDMPKGRPNTMNNYGVLLHELGLDEPLMTPLRERFL 198
Query: 229 RPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFF 288
+PL + + + GG LDSH FVV+Y +D++LG H D++E+TLNV LGK FTGG L+F
Sbjct: 199 QPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLNVALGKVFTGGALYF 258
Query: 289 RGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFR 348
G + E + HV G+ VLHRG HGAR +G R NL++W R+S R
Sbjct: 259 GGL-----FQAPTALTEPLEVEHVVGQGVLHRGGQLHGARPLGTGERWNLVVWLRASAVR 313
Query: 349 EMKRYQKDFSSWCGECFRE 367
+S C C RE
Sbjct: 314 ---------NSLCPMCCRE 323
>sp|Q9CQ04|OGFD2_MOUSE 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Mus musculus GN=Ogfod2 PE=2 SV=1
Length = 349
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 21/240 (8%)
Query: 119 IITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE---------ESFRSIISEPSPGVFTF 169
I ++Y P E+Y+ P F+ A + +T + ++ E ++
Sbjct: 84 IASSYHPARPEVYSSLQDAALAPEFMAAAEYSTSPGADLEGLLQRLETVSEEKR--IYRV 141
Query: 170 EMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLET-MLDKLMETYI 228
+ +FC+ LL E+E+FE ++ RPNTMN +G ++ + GL+ ++ L E ++
Sbjct: 142 PVFSAKFCQTLLEELEHFE----QSDMPKGRPNTMNNHGVLMYELGLDDPLVTPLRERFL 197
Query: 229 RPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFF 288
PL + + + GG LDSH FVV+Y +D+DLG H D++E+TLNV LGK FTGG L+F
Sbjct: 198 LPLMALLYPDYGGGYLDSHRAFVVKYALGQDLDLGCHYDNAELTLNVALGKDFTGGALYF 257
Query: 289 RGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFR 348
G + +E + HV G +LHRG HGAR G R NL++W R+S R
Sbjct: 258 GGL-----FQAPAALKETLEVEHVVGSGILHRGGQLHGARPLCKGERWNLVVWLRASAVR 312
>sp|Q20679|PLOD_CAEEL Procollagen-lysine,2-oxoglutarate 5-dioxygenase OS=Caenorhabditis
elegans GN=let-268 PE=1 SV=1
Length = 730
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 158 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWV----NEAKFRIMRPNTMNKYGAVLDD 213
++ + P V+ F ++ RFCE L+ E+E F +W N+ + N + ++
Sbjct: 549 VVDQACPDVYDFPLMSERFCEELIEEMEGFGRWSDGSNNDKRLAGGYENVPTR-DIHMNQ 607
Query: 214 FGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTL 273
G E M+TY+RP+ + F ++S+ FVV Y + L H D S ++
Sbjct: 608 VGFERQWLYFMDTYVRPVQEKTFIGYYHQPVESNMMFVVRYKPEEQPSLRPHHDASTFSI 667
Query: 274 NVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHGAR 328
++ L G+ + GG G R ++ N +E+ G A++ GR H H
Sbjct: 668 DIALNKKGRDYEGG-----GVRYIRY-NCTVPADEV-------GYAMMFPGRLTHLHEGL 714
Query: 329 ATTSGHR 335
ATT G R
Sbjct: 715 ATTKGTR 721
>sp|O60568|PLOD3_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens
GN=PLOD3 PE=1 SV=1
Length = 738
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 157 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------ 210
I+ +P P V+ F +L + C+ L+AE+E++ +W + R Y V
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIH 613
Query: 211 LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE 270
+ G E +L+ TY+ P+++ F + + FVV Y D L H D S
Sbjct: 614 MKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSST 672
Query: 271 VTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRH 325
TLNV L G + GG G R ++ S + G A+LH GR H H
Sbjct: 673 FTLNVALNHKGLDYEGG-----GCRFLRYDCVISSPRK--------GWALLHPGRLTHYH 719
Query: 326 GARATTSGHR 335
TT G R
Sbjct: 720 EGLPTTWGTR 729
>sp|Q5R6K5|PLOD3_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Pongo abelii
GN=PLOD3 PE=2 SV=1
Length = 738
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 157 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------ 210
I+ +P P V+ F +L + C+ L+AE+E++ +W + R Y V
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIH 613
Query: 211 LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE 270
+ G E +L+ TY+ P+++ F + + FVV Y D L H D S
Sbjct: 614 MKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSST 672
Query: 271 VTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRH 325
TLNV L G + GG G R ++ S + G A+LH GR H H
Sbjct: 673 FTLNVALNHKGLDYEGG-----GCRFLRYDCVISSPRK--------GWALLHPGRLTHYH 719
Query: 326 GARATTSGHR 335
TT G R
Sbjct: 720 EGLPTTWGTR 729
>sp|Q9R0E1|PLOD3_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Mus musculus
GN=Plod3 PE=1 SV=1
Length = 741
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Query: 158 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------L 211
++ +P P V+ F +L + C+ L+ E+E++ +W + R Y V +
Sbjct: 561 LVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIHM 617
Query: 212 DDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 271
G E +L+ TY+ P+++ F T + FVV Y D L H D S
Sbjct: 618 KQVGYEDQWLQLLRTYVGPMTEYLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTF 676
Query: 272 TLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHG 326
TLNV L G + GG F C S G A+LH GR H H
Sbjct: 677 TLNVALNHKGVDYEGGGCRFLRYDCRIS-------------SPRKGWALLHPGRLTHYHE 723
Query: 327 ARATTSGHR 335
TT G R
Sbjct: 724 GLPTTRGTR 732
>sp|Q5U367|PLOD3_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Rattus
norvegicus GN=Plod3 PE=2 SV=1
Length = 741
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Query: 158 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------L 211
++ +P P V+ F +L + C+ L+ E+E++ +W + R Y V +
Sbjct: 561 LVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIHM 617
Query: 212 DDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 271
G E +L+ TY+ P+++ F T + FVV Y D L H D S
Sbjct: 618 KQVGYEDQWLQLLRTYVGPMTEHLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTF 676
Query: 272 TLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHG 326
TLNV L G + GG F C S G A+LH GR H H
Sbjct: 677 TLNVALNHKGVDYEGGGCRFLRYDCRVS-------------SPRKGWALLHPGRLTHYHE 723
Query: 327 ARATTSGHR 335
TT G R
Sbjct: 724 GLPTTRGTR 732
>sp|Q9R0B9|PLOD2_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus
GN=Plod2 PE=2 SV=2
Length = 737
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 157 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD--- 213
+I+ +P P VF F + R C+ L+ E+E++ KW + K R Y V D
Sbjct: 556 NIVEQPCPDVFWFPIFSERACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIH 612
Query: 214 ---FGLETMLDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 267
GLE + + +I P++ KVF + G + L+ FVV+Y +R L H D
Sbjct: 613 MKQIGLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHD 668
Query: 268 DSEVTLNVCL---GKQFTGGELFFRGTRC 293
S T+N+ L G+ F GG F C
Sbjct: 669 ASTFTINIALNNVGEDFQGGGCKFLRYNC 697
>sp|Q5UQC3|PLOD_MIMIV Procollagen lysyl hydroxylase and glycosyltransferase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L230 PE=1
SV=1
Length = 895
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 141 PPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVN--EAKF-- 196
P F+ +Q+ + + I ++ V++F + P FC+ ++ ++ W ++ F
Sbjct: 703 PEFLSHLQNFKDFDYTEICND----VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDP 758
Query: 197 RIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGK 256
RI + L + GL+ ++ Y+ P + + T D + FVV+Y
Sbjct: 759 RIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNY--KTKDINLAFVVKYDM 816
Query: 257 DRDVDLGFHVDDSEVTLNVCL---GKQFT-GGELFFRGTRCEKHVNTGSQTEEIFDYSHV 312
+R +L H D S TLN+ L GK++T GG F R K + G +
Sbjct: 817 ERQSELAPHHDSSTYTLNIALNEYGKEYTAGGCEFIR----HKFIWQGQKV--------- 863
Query: 313 PGRAVLHRGR--HRHGARATTSGHRVNLL 339
G A +H G+ H A TSG R L+
Sbjct: 864 -GYATIHAGKLLAYHRALPITSGKRYILV 891
>sp|Q811A3|PLOD2_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Rattus
norvegicus GN=Plod2 PE=2 SV=1
Length = 737
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 157 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD--- 213
+I+ +P P VF F + R C+ L+ E+E++ KW + K R Y V D
Sbjct: 556 NIVEQPCPDVFWFPIFSERACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIH 612
Query: 214 ---FGLETMLDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 267
LE + + +I P++ KVF + G + L+ FVV+Y +R L H D
Sbjct: 613 MKQIDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHD 668
Query: 268 DSEVTLNVCL---GKQFTGGELFFRGTRC 293
S T+N+ L G+ F GG F C
Sbjct: 669 ASTFTINIALNNVGEDFQGGGCKFLRYNC 697
>sp|P24802|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Gallus gallus
GN=PLOD1 PE=1 SV=1
Length = 730
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 91/241 (37%), Gaps = 33/241 (13%)
Query: 109 TRRHRDYRQKIITNYQP--LHRELYNLHIGNFFVPP---FVKAIQDNTEESFRS-IISEP 162
T RH+ + NYQ LH +L+ + F P K I +N + + ++ P
Sbjct: 500 TNRHQFGHILSLENYQTTHLHNDLWQI-----FSNPEDWREKYIHENYTAALKGKLVEMP 554
Query: 163 SPGVFTFEMLQPRFCELLLAEVENFEKWV--NEAKFRIMRP-NTMNKYGAVLDDFGLETM 219
P V+ F + C+ L+ E+E++ KW + RI + ++ G E
Sbjct: 555 CPDVYWFPIFTDTACDELVEEMEHYGKWSTGDNTDSRIQGGYENVPTIDIHMNQIGFERE 614
Query: 220 LDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCL-- 277
K + YI P+++ + T FVV Y D L H D S T+N+ L
Sbjct: 615 WYKFLLDYIAPITEKLYPGYYTKT-QFELAFVVRYKPDEQPSLMPHHDASTFTINIALNR 673
Query: 278 -GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHGARATTSGH 334
G + GG F C G ++H GR H H TT G
Sbjct: 674 VGIDYEGGGCRFLRYNCSIRAPR-------------KGWTLMHPGRLTHYHEGLPTTKGT 720
Query: 335 R 335
R
Sbjct: 721 R 721
>sp|O00469|PLOD2_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens
GN=PLOD2 PE=1 SV=2
Length = 737
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 109 TRRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPF---VKAIQDNTEESF-RSIISEPSP 164
+ RH R NY H YN + F P K I + + F +I+ +P P
Sbjct: 507 SNRHEFGRLLSTANYNTSH---YNNDLWQIFENPVDWKEKYINRDYSKIFTENIVEQPCP 563
Query: 165 GVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD------FGLET 218
VF F + + C+ L+ E+E++ KW + K R Y V D LE
Sbjct: 564 DVFWFPIFSEKACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIHMKQVDLEN 620
Query: 219 MLDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNV 275
+ + +I P++ KVF + G + L+ FVV+Y +R L H D S T+N+
Sbjct: 621 VWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHDASTFTINI 676
Query: 276 CL---GKQFTGGELFFRGTRC 293
L G+ F GG F C
Sbjct: 677 ALNNVGEDFQGGGCKFLRYNC 697
>sp|Q02809|PLOD1_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens
GN=PLOD1 PE=1 SV=2
Length = 727
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 24/197 (12%)
Query: 148 QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWV--NEAKFRIMRP-NTM 204
Q+ T+ ++ P P V+ F + C+ L+ E+E+F +W N RI +
Sbjct: 537 QNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGNNKDNRIQGGYENV 596
Query: 205 NKYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRDVDLG 263
++ G E K + YI P++ K++ + D FVV Y D L
Sbjct: 597 PTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQPSLM 654
Query: 264 FHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR 320
H D S T+N+ L G + GG F C G ++H
Sbjct: 655 PHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPR-------------KGWTLMHP 701
Query: 321 GR--HRHGARATTSGHR 335
GR H H TT G R
Sbjct: 702 GRLTHYHEGLPTTRGTR 718
>sp|Q63321|PLOD1_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Rattus
norvegicus GN=Plod1 PE=2 SV=1
Length = 728
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 145 KAIQDNTEESFRS-IISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPN 202
K I +N ++ ++ P P V+ F + C+ L+ E+E++ +W + + K ++
Sbjct: 534 KYIHENYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHYGQWSLGDNKDNRIQGG 593
Query: 203 TMN--KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRD 259
N ++ E K + YI PL+ K++ + D FVV Y D
Sbjct: 594 YENVPTIDIHMNQITFEREWHKFLVEYIAPLTEKLYPGYYTKAQFDL--AFVVRYKPDEQ 651
Query: 260 VDLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRA 316
L H D S T+N+ L G+ + GG F C G A
Sbjct: 652 PSLMPHHDASTFTINIALNRVGEDYEGGGCRFLRYNCSVRAPR-------------KGWA 698
Query: 317 VLHRGR--HRHGARATTSGHR 335
++H GR H H TT G R
Sbjct: 699 LMHPGRLTHYHEGLPTTKGTR 719
>sp|Q9R0E2|PLOD1_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus
GN=Plod1 PE=1 SV=1
Length = 728
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 95/242 (39%), Gaps = 35/242 (14%)
Query: 109 TRRHRDYRQKIITNYQP--LHRELYNLHIGNFFVPP---FVKAIQDNTEESFRS-IISEP 162
T RH + NYQ LH +L+ + F P K I +N ++ ++ P
Sbjct: 498 TNRHTFGHLLSLDNYQTTHLHNDLWEV-----FSNPEDWKEKYIHENYTKALAGKLVETP 552
Query: 163 SPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPNTMN--KYGAVLDDFGLETM 219
P V+ F + C+ L+ E+E++ +W + + K ++ N ++ E
Sbjct: 553 CPDVYWFPIFTEAACDELVEEMEHYGQWSLGDNKDNRIQGGYENVPTIDIHMNQITFERE 612
Query: 220 LDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCL- 277
K + YI P++ K++ + D FVV Y D L H D S T+N+ L
Sbjct: 613 WHKFLVEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQPSLMPHHDASTFTVNIALN 670
Query: 278 --GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHGARATTSG 333
G+ + GG F C G A+LH GR H H TT G
Sbjct: 671 RVGEDYEGGGCRFLRYNCSVRAPR-------------KGWALLHPGRLTHYHEGLPTTKG 717
Query: 334 HR 335
R
Sbjct: 718 TR 719
>sp|Q5R9N3|PLOD1_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Pongo abelii
GN=PLOD1 PE=2 SV=1
Length = 727
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 24/197 (12%)
Query: 148 QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPNTMN- 205
Q+ T+ ++ P P V+ F + C+ L+ E+E+F +W + + K ++ N
Sbjct: 537 QNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGDNKDNRIQGGYENV 596
Query: 206 -KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRDVDLG 263
++ G E K + YI P++ K++ + D FVV Y D L
Sbjct: 597 PTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQPSLM 654
Query: 264 FHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR 320
H D S T+N+ L G + GG F C G ++H
Sbjct: 655 PHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPR-------------KGWTLMHP 701
Query: 321 GR--HRHGARATTSGHR 335
GR H H TT G R
Sbjct: 702 GRLTHYHEGLPTTRGTR 718
>sp|O77588|PLOD1_BOVIN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Bos taurus
GN=PLOD1 PE=2 SV=2
Length = 726
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 25/201 (12%)
Query: 145 KAIQDNTEESFRS-IISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPN 202
K I +N ++ ++ P P V+ F + C+ L+ E+E++ +W + + K ++
Sbjct: 532 KYIHENYTKALAGKMVEMPCPDVYWFPIFTETACDELVEEMEHYGQWSLGDNKDNRIQGG 591
Query: 203 TMN--KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRD 259
N ++ E K + YI P++ K++ + D FVV Y D
Sbjct: 592 YENVPTIDIHMNQINFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQ 649
Query: 260 VDLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRA 316
L H D S T+N+ L G + GG F C G
Sbjct: 650 PSLVPHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPR-------------KGWT 696
Query: 317 VLHRGR--HRHGARATTSGHR 335
++H GR H H TT G R
Sbjct: 697 LMHPGRLTHYHEGLPTTKGTR 717
>sp|Q03LR5|Y588_STRTD UPF0176 protein STER_0588 OS=Streptococcus thermophilus (strain
ATCC BAA-491 / LMD-9) GN=STER_0588 PE=3 SV=1
Length = 327
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q5M5E1|Y548_STRT2 UPF0176 protein stu0548 OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=stu0548 PE=3 SV=1
Length = 327
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q5M0V5|Y548_STRT1 UPF0176 protein str0548 OS=Streptococcus thermophilus (strain CNRZ
1066) GN=str0548 PE=3 SV=1
Length = 327
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q8A7D1|TILS_BACTN tRNA(Ile)-lysidine synthase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=tilS PE=3 SV=1
Length = 426
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 82 PMLGLNREEKVKFMREILMKYLPQGERTRRHRDY-RQKIITNYQPLHRELYNLHIGNFFV 140
P+L +NREE ++++++I ++ + T +Y R KI N PL +E+ N + N +
Sbjct: 159 PLLCINREEIIRYLQQIGQDFVT--DSTNLEDEYTRNKIRLNLLPLMQEI-NPSVKNSLI 215
Query: 141 PP----------FVKAIQDN-----TEESFR--SIISEPSPGVFTFEMLQP 174
+ K I + T E R +++ EP+P F FE L P
Sbjct: 216 ETSNHLNDVATIYNKVIDEAKTRIITPEGIRIDALLDEPAPEAFLFETLHP 266
>sp|Q0AP20|Y1675_MARMM PKHD-type hydroxylase Mmar10_1675 OS=Maricaulis maris (strain
MCS10) GN=Mmar10_1675 PE=3 SV=1
Length = 219
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 263 GFHVDDS---------EVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVP 313
G H+DD+ TL + + GGEL G E + +
Sbjct: 93 GPHIDDALMGGRRADLSFTLFLSDPDSYDGGELVMDGPDGETEIKLAA------------ 140
Query: 314 GRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFR-EMKRYQKDFSSWCGECF-REKKER 371
G AV++ H T G RV ++ W RS V R + + D F R+ K R
Sbjct: 141 GDAVVYATSAIHQVAPVTRGERVAVVGWVRSLVRRPDQREILFDLDQVSAALFARDGKTR 200
Query: 372 QRLSIAATKSELLKQEGE 389
+ + TK+ LL+Q E
Sbjct: 201 ELDLVLKTKANLLRQWAE 218
>sp|A4VTD4|Y406_STRSY UPF0176 protein SSU05_0406 OS=Streptococcus suis (strain 05ZYH33)
GN=SSU05_0406 PE=3 SV=1
Length = 327
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVRGELWDGKMYVFDERIAVDVNHVNPVVVGKDWFDGTPCERYVNCGN 267
>sp|A4VZL1|Y392_STRS2 UPF0176 protein SSU98_0392 OS=Streptococcus suis (strain 98HAH33)
GN=SSU98_0392 PE=3 SV=1
Length = 327
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVRGELWDGKMYVFDERIAVDVNHVNPVVVGKDWFDGTPCERYVNCGN 267
>sp|A3CLI1|Y593_STRSV UPF0176 protein SSA_0593 OS=Streptococcus sanguinis (strain SK36)
GN=SSA_0593 PE=3 SV=1
Length = 328
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D +++++ G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERISVDINHVNPVVIGKDWFDGTPCERYVNCGN 267
>sp|Q02YX4|Y1324_LACLS UPF0176 protein LACR_1324 OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=LACR_1324 PE=3 SV=1
Length = 319
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV--DLGF---HVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V DL + +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWYGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|Q9CG88|YMDE_LACLA UPF0176 protein YmdE OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=ymdE PE=3 SV=1
Length = 319
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWDGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|A8AVI2|Y476_STRGC UPF0176 protein SGO_0476 OS=Streptococcus gordonii (strain Challis
/ ATCC 35105 / CH1 / DL1 / V288) GN=SGO_0476 PE=3 SV=1
Length = 328
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D +++++ G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERISVDINHVDPVVIGKDWFDGTPCERYVNCGN 267
>sp|A2RKR4|Y1287_LACLM UPF0176 protein llmg_1287 OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=llmg_1287 PE=3 SV=1
Length = 319
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWDGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|C1CHZ8|Y154_STRZP UPF0176 protein SPP_0154 OS=Streptococcus pneumoniae (strain P1031)
GN=SPP_0154 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1CNW3|Y125_STRZT UPF0176 protein SPT_0125 OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=SPT_0125 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B5E5X4|Y092_STRP4 UPF0176 protein SPG_0092 OS=Streptococcus pneumoniae serotype 19F
(strain G54) GN=SPG_0092 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B1I7Z3|Y194_STRPI UPF0176 protein SPH_0194 OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=SPH_0194 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1C9Z1|Y154_STRP7 UPF0176 protein SP70585_0154 OS=Streptococcus pneumoniae (strain
70585) GN=SP70585_0154 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1CBR1|Y118_STRZJ UPF0176 protein SPJ_0118 OS=Streptococcus pneumoniae (strain JJA)
GN=SPJ_0118 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B8ZJY0|Y105_STRPJ UPF0176 protein SPN23F01050 OS=Streptococcus pneumoniae (strain
ATCC 700669 / Spain 23F-1) GN=SPN23F01050 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|P67330|Y095_STRPN UPF0176 protein SP_0095 OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=SP_0095 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|Q04MY5|Y091_STRP2 UPF0176 protein SPD_0091 OS=Streptococcus pneumoniae serotype 2
(strain D39 / NCTC 7466) GN=SPD_0091 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B2IRH1|Y090_STRPS UPF0176 protein SPCG_0090 OS=Streptococcus pneumoniae (strain
CGSP14) GN=SPCG_0090 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|P67331|Y084_STRR6 UPF0176 protein spr0084 OS=Streptococcus pneumoniae (strain ATCC
BAA-255 / R6) GN=spr0084 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|Q73A25|Y1961_BACC1 UPF0176 protein BCE_1961 OS=Bacillus cereus (strain ATCC 10987)
GN=BCE_1961 PE=3 SV=1
Length = 319
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 240 GGSTLDSHHGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCE 294
G + HG +V YGKD +V D +V D + + V + G+ +F G CE
Sbjct: 198 GYEDVSQLHGGIVTYGKDPEVQGELWDGQCYVFDERIAVPVNQKEHVIVGKDYFTGEPCE 257
Query: 295 KHVNTGS 301
++VN +
Sbjct: 258 RYVNCAN 264
>sp|A8F9I7|Y205_BACP2 UPF0176 protein BPUM_0205 OS=Bacillus pumilus (strain SAFR-032)
GN=BPUM_0205 PE=3 SV=1
Length = 322
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 249 GFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
G +V YGKD +V D +V D+ +T+ V + G+ FF G CE++VN +
Sbjct: 205 GGIVTYGKDPEVQGKLWDGQCYVFDTRLTVPVNQTEHVVVGKDFFTGEPCERYVNCAN 262
>sp|A1VQD4|Y2559_POLNA PKHD-type hydroxylase Pnap_2559 OS=Polaromonas naphthalenivorans
(strain CJ2) GN=Pnap_2559 PE=3 SV=1
Length = 227
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 28/111 (25%)
Query: 251 VVEYGKDRDVDLGFHVDD-------------SEVTLNVCLGK--QFTGGELFFRGTRCEK 295
+ YG D + G HVD+ ++++ V L + GGEL T E+
Sbjct: 84 INRYGGDSNF-YGNHVDNAIRAVPNSPQRVRTDISCTVFLNDPGDYDGGELTIADTYGEQ 142
Query: 296 HVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSV 346
V + G AVL+ G H R T GHR+ W S V
Sbjct: 143 RVKLPA------------GHAVLYPGTSLHQVRPVTRGHRLACFFWIESLV 181
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 164 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDK 222
P + L RFCEL E+EN EK VN+ K + + P ++ Y ++ +G + DK
Sbjct: 422 PDHLAYNCLIRRFCEL--GEMENAEKEVNKMKLKGVSP-SVETYNILIGGYGRKYEFDK 477
>sp|Q65EW5|Y3574_BACLD UPF0176 protein BLi03574/BL00834 OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=BLi03574 PE=3 SV=1
Length = 322
Score = 32.3 bits (72), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 248 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301
HG +V YGKD +V D +V D +++ V + G+ +F G CE++VN +
Sbjct: 204 HGGIVTYGKDPEVQGELWDGKCYVFDERISVPVNQKEHVIVGKDYFTGEPCERYVNCAN 262
>sp|B5XT12|Y3192_KLEP3 PKHD-type hydroxylase KPK_3192 OS=Klebsiella pneumoniae (strain
342) GN=KPK_3192 PE=3 SV=1
Length = 225
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 229 RPLSKVFFAEVG-GSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELF 287
R +S F G G T +GF V+ ++ + G+ D TL +C + + GGEL
Sbjct: 77 RTISAPLFNRYGPGET----YGFHVDGAVRQNAEAGWMRTDLSATLFLCDPESYEGGELV 132
Query: 288 FRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVF 347
T + V + G VL+ H T G R LW +S V
Sbjct: 133 IEDTYGQHRVKLPA------------GHLVLYPASSLHCVTPVTHGVRQASFLWIQSMVR 180
Query: 348 REMKR 352
+ +R
Sbjct: 181 DDKQR 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,307,793
Number of Sequences: 539616
Number of extensions: 6575782
Number of successful extensions: 15098
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 15031
Number of HSP's gapped (non-prelim): 55
length of query: 392
length of database: 191,569,459
effective HSP length: 119
effective length of query: 273
effective length of database: 127,355,155
effective search space: 34767957315
effective search space used: 34767957315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)