Query 016264
Match_columns 392
No_of_seqs 208 out of 313
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 05:17:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016264.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016264hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1971 Lysyl hydroxylase [Pos 100.0 2.3E-63 4.9E-68 498.6 14.4 347 42-389 29-402 (415)
2 PRK05467 Fe(II)-dependent oxyg 99.8 3.9E-20 8.4E-25 175.9 14.1 160 166-349 2-182 (226)
3 smart00702 P4Hc Prolyl 4-hydro 99.8 3.9E-19 8.3E-24 159.6 13.1 162 164-343 1-178 (178)
4 PLN00052 prolyl 4-hydroxylase; 99.5 9E-14 1.9E-18 138.0 12.5 174 163-349 53-257 (310)
5 PHA02813 hypothetical protein; 99.3 9.9E-12 2.2E-16 124.5 10.9 154 164-340 5-178 (354)
6 COG3128 PiuC Uncharacterized i 99.1 1.5E-09 3.2E-14 101.4 14.3 164 165-349 3-185 (229)
7 PF13640 2OG-FeII_Oxy_3: 2OG-F 99.0 3.8E-10 8.2E-15 92.1 4.8 83 251-343 3-100 (100)
8 KOG1971 Lysyl hydroxylase [Pos 99.0 4.3E-10 9.4E-15 114.7 5.1 107 112-229 293-415 (415)
9 PHA02869 C4L/C10L-like gene fa 99.0 3.7E-09 8E-14 107.8 11.3 82 241-340 98-187 (418)
10 PF03171 2OG-FeII_Oxy: 2OG-Fe( 98.4 4.5E-07 9.8E-12 73.8 4.7 79 249-343 4-97 (98)
11 KOG1591 Prolyl 4-hydroxylase a 98.1 1.7E-05 3.7E-10 78.7 10.6 160 163-345 96-285 (289)
12 PF05721 PhyH: Phytanoyl-CoA d 97.2 0.01 2.3E-07 52.2 13.0 169 165-336 5-210 (211)
13 PF12851 Tet_JBP: Oxygenase do 97.1 0.00078 1.7E-08 62.0 5.7 72 258-343 83-170 (171)
14 PF09859 Oxygenase-NA: Oxygena 97.1 0.00098 2.1E-08 61.6 6.2 82 250-340 65-168 (173)
15 TIGR02408 ectoine_ThpD ectoine 96.9 0.027 5.8E-07 55.0 14.8 174 164-345 28-249 (277)
16 TIGR01762 chlorin-enz chlorina 96.7 0.04 8.6E-07 54.5 13.9 40 306-345 208-250 (288)
17 PF13661 2OG-FeII_Oxy_4: 2OG-F 96.3 0.0058 1.3E-07 48.0 4.1 39 252-292 16-66 (70)
18 TIGR02466 conserved hypothetic 96.0 0.17 3.8E-06 47.9 13.4 88 248-337 97-193 (201)
19 PF13532 2OG-FeII_Oxy_2: 2OG-F 95.8 0.088 1.9E-06 47.6 10.0 154 165-339 1-192 (194)
20 PF13759 2OG-FeII_Oxy_5: Putat 95.5 0.047 1E-06 45.3 6.7 87 250-338 3-98 (101)
21 COG3826 Uncharacterized protei 94.7 0.054 1.2E-06 51.4 5.2 84 249-341 126-231 (236)
22 PRK15401 alpha-ketoglutarate-d 94.4 0.52 1.1E-05 45.3 11.3 158 160-340 14-210 (213)
23 PF03336 Pox_C4_C10: Poxvirus 92.6 0.25 5.5E-06 50.4 6.1 81 243-339 76-164 (339)
24 PLN03001 oxidoreductase, 2OG-F 88.4 1 2.3E-05 44.0 6.0 71 259-345 132-214 (262)
25 PLN02276 gibberellin 20-oxidas 88.2 1.4 3.1E-05 44.9 7.2 78 251-344 210-303 (361)
26 PLN02904 oxidoreductase 87.7 1.6 3.4E-05 44.6 7.0 79 251-345 212-306 (357)
27 PLN02365 2-oxoglutarate-depend 86.7 1.7 3.8E-05 43.0 6.6 73 258-343 164-248 (300)
28 PLN02947 oxidoreductase 86.5 2.1 4.7E-05 44.0 7.3 71 259-345 241-323 (374)
29 PLN00417 oxidoreductase, 2OG-F 85.4 2.4 5.2E-05 43.1 7.0 80 251-345 207-302 (348)
30 PLN02984 oxidoreductase, 2OG-F 85.4 2.7 5.8E-05 42.8 7.3 79 251-345 204-299 (341)
31 PLN02156 gibberellin 2-beta-di 85.3 2.5 5.5E-05 42.8 7.1 80 251-345 182-279 (335)
32 KOG3710 EGL-Nine (EGLN) protei 84.7 3.7 8E-05 40.5 7.5 90 248-349 144-244 (280)
33 COG3751 EGL-9 Predicted prolin 84.6 3 6.4E-05 41.3 6.9 88 251-345 140-241 (252)
34 PLN02750 oxidoreductase, 2OG-F 84.6 2.4 5.2E-05 42.9 6.5 82 251-346 197-294 (345)
35 PLN02216 protein SRG1 84.4 2.6 5.7E-05 43.0 6.7 79 252-345 215-309 (357)
36 PLN03178 leucoanthocyanidin di 83.8 2.9 6.4E-05 42.6 6.8 72 258-345 226-309 (360)
37 PLN02912 oxidoreductase, 2OG-F 83.7 3.6 7.9E-05 41.8 7.4 78 252-345 202-295 (348)
38 PTZ00273 oxidase reductase; Pr 82.4 3 6.5E-05 41.6 6.1 79 251-345 181-276 (320)
39 PLN02485 oxidoreductase 82.4 1.9 4.1E-05 43.2 4.7 74 259-346 204-289 (329)
40 PLN02515 naringenin,2-oxogluta 82.2 3.2 6.9E-05 42.5 6.3 82 251-346 199-296 (358)
41 TIGR00568 alkb DNA alkylation 81.7 5.4 0.00012 36.9 7.1 65 248-326 96-168 (169)
42 PLN02254 gibberellin 3-beta-di 81.2 3.3 7.1E-05 42.4 6.0 80 251-345 214-309 (358)
43 PLN02704 flavonol synthase 80.8 4.5 9.7E-05 40.8 6.8 71 259-345 215-297 (335)
44 PLN02299 1-aminocyclopropane-1 80.8 4.6 0.0001 40.6 6.8 80 251-345 162-257 (321)
45 PF10014 2OG-Fe_Oxy_2: 2OG-Fe 80.6 2.2 4.8E-05 40.0 4.2 82 251-341 100-194 (195)
46 PLN02403 aminocyclopropanecarb 77.9 7.5 0.00016 38.9 7.2 81 251-346 157-254 (303)
47 PLN02393 leucoanthocyanidin di 76.8 8 0.00017 39.5 7.2 80 251-345 217-312 (362)
48 PLN02639 oxidoreductase, 2OG-F 76.5 8 0.00017 39.0 7.1 80 251-345 194-289 (337)
49 PLN02758 oxidoreductase, 2OG-F 76.3 7.7 0.00017 39.7 7.0 81 251-345 215-311 (361)
50 KOG3200 Uncharacterized conser 75.8 7.6 0.00017 37.0 6.2 105 161-278 9-120 (224)
51 PLN02997 flavonol synthase 75.0 9.6 0.00021 38.5 7.2 79 252-346 188-282 (325)
52 COG5285 Protein involved in bi 73.0 13 0.00028 37.7 7.3 98 247-345 114-233 (299)
53 PF05118 Asp_Arg_Hydrox: Aspar 72.5 9.5 0.00021 34.6 5.9 76 247-340 80-157 (163)
54 KOG0143 Iron/ascorbate family 71.1 9.1 0.0002 38.7 5.9 81 251-345 180-276 (322)
55 PLN03002 oxidoreductase, 2OG-F 70.3 11 0.00024 38.0 6.4 83 251-345 186-285 (332)
56 PHA02866 Hypothetical protein; 60.9 79 0.0017 32.5 10.1 151 163-339 5-164 (333)
57 PHA02923 hypothetical protein; 55.9 29 0.00064 35.4 6.2 77 245-340 66-142 (315)
58 PF10637 Ofd1_CTDD: Oxoglutara 53.6 29 0.00064 34.5 5.8 127 164-290 31-189 (266)
59 KOG3889 Predicted gamma-butyro 43.7 33 0.00072 35.0 4.4 80 206-290 136-223 (371)
60 PF11265 Med25_VWA: Mediator c 38.9 43 0.00093 32.8 4.2 71 215-287 25-107 (226)
61 KOG3425 Uncharacterized conser 38.5 11 0.00024 33.8 0.1 28 330-365 22-49 (128)
62 TIGR02409 carnitine_bodg gamma 38.4 63 0.0014 32.8 5.6 73 206-288 134-219 (366)
63 PRK13916 plasmid segregation p 37.4 16 0.00034 31.0 0.9 30 69-106 18-47 (97)
64 cd00250 CAS_like Clavaminic ac 36.1 52 0.0011 31.4 4.4 32 259-290 93-130 (262)
65 TIGR02410 carnitine_TMLD trime 33.7 84 0.0018 32.0 5.6 75 206-290 126-213 (362)
66 KOG4459 Membrane-associated pr 31.9 30 0.00064 37.2 2.1 64 273-345 370-435 (471)
67 cd03012 TlpA_like_DipZ_like Tl 30.8 17 0.00037 30.6 0.1 10 358-367 32-41 (126)
68 TIGR00411 redox_disulf_1 small 29.4 25 0.00055 26.7 0.9 13 358-370 8-20 (82)
69 cd02967 mauD Methylamine utili 29.1 33 0.00071 27.8 1.5 12 359-370 31-42 (114)
70 KOG3844 Predicted component of 27.9 8E+02 0.017 26.5 12.8 176 161-353 34-226 (476)
71 TIGR00412 redox_disulf_2 small 27.3 23 0.0005 27.7 0.3 12 357-368 6-17 (76)
72 PF02668 TauD: Taurine catabol 27.1 41 0.00089 31.1 2.0 32 260-291 95-132 (258)
73 cd02956 ybbN ybbN protein fami 25.3 31 0.00067 27.2 0.7 13 358-370 21-33 (96)
74 PF15379 DUF4606: Domain of un 25.0 68 0.0015 28.0 2.7 17 356-372 29-45 (104)
75 TIGR02738 TrbB type-F conjugat 24.5 28 0.0006 31.5 0.3 12 359-370 60-71 (153)
76 PF13905 Thioredoxin_8: Thiore 24.5 25 0.00055 27.6 0.0 10 357-366 9-18 (95)
77 TIGR03404 bicupin_oxalic bicup 23.8 2.6E+02 0.0056 29.0 7.2 73 249-338 69-141 (367)
78 PRK13264 3-hydroxyanthranilate 23.8 6.3E+02 0.014 24.0 9.9 124 214-369 7-131 (177)
79 cd02993 PDI_a_APS_reductase PD 23.4 32 0.0007 28.3 0.5 13 358-370 30-42 (109)
80 PF04378 RsmJ: Ribosomal RNA s 23.3 1.1E+02 0.0024 30.2 4.2 60 165-225 160-226 (245)
81 cd03000 PDI_a_TMX3 PDIa family 22.7 31 0.00068 28.0 0.2 12 359-370 25-36 (104)
82 cd03008 TryX_like_RdCVF Trypar 22.4 32 0.0007 31.0 0.3 11 359-369 35-45 (146)
83 PRK09943 DNA-binding transcrip 22.3 3E+02 0.0064 25.0 6.6 63 249-332 109-171 (185)
84 cd03010 TlpA_like_DsbE TlpA-li 22.1 37 0.0008 28.3 0.6 12 359-370 35-46 (127)
85 cd02985 TRX_CDSP32 TRX family, 21.7 35 0.00075 28.0 0.3 11 358-368 24-34 (103)
86 COG0526 TrxA Thiol-disulfide i 21.6 32 0.00069 25.8 0.1 11 357-367 40-50 (127)
87 PF08534 Redoxin: Redoxin; In 21.2 55 0.0012 27.8 1.5 24 331-369 26-49 (146)
88 cd03005 PDI_a_ERp46 PDIa famil 21.1 36 0.00078 26.8 0.3 11 359-369 26-36 (102)
89 TIGR02180 GRX_euk Glutaredoxin 20.1 43 0.00093 25.5 0.5 18 358-375 6-23 (84)
90 PF02311 AraC_binding: AraC-li 20.0 2.5E+02 0.0053 22.5 5.1 33 309-341 43-76 (136)
No 1
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-63 Score=498.59 Aligned_cols=347 Identities=38% Similarity=0.543 Sum_probs=336.2
Q ss_pred ccccccccCCCCCCCCCCCCCccCCCChhHHHHhhhcCCCccCCCCHHHHHHHHHHHHHHhCCchHhhH--HHHHHHhHH
Q 016264 42 SQNQRLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQGERTR--RHRDYRQKI 119 (392)
Q Consensus 42 ~~~~r~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~lp~~~~~~~~~~k~~~~~~il~~~~~~~~r~~--~~~~~r~~i 119 (392)
-++.++...||.+|.+++|+|++|+|+++..++||.|+||.+|++.++.|+|||.++|.+|+|..++.+ .++.||++|
T Consensus 29 ~ni~ld~~~~~fq~l~g~~~dv~Lkf~~~~~~~ln~~~pt~~l~~~~n~~~K~~~d~l~nY~~r~~~~~~l~~~~~r~~~ 108 (415)
T KOG1971|consen 29 LNITLDHRSRIFQNLNGAYEDVVLKFSSGQVRALNVAYPTLPLTVHGNGPAKFMLDYLGNYIPREWTGCSLCCKNYRELI 108 (415)
T ss_pred hcccccCcCcccccCcCCcCCeeEecccCchhhhhhcCCCcceeeccCccHHHHHHHHhhhcchhhhhhhccccccchhh
Confidence 356799999999999999999999999999999999999999999999999999999999999999988 999999999
Q ss_pred hhcCCCCCccccccCccccCCchhHHHhhhccHhhhhccccccCCcEEEecCCCHHHHHHHHHHHHhhhhhhhccccccc
Q 016264 120 ITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIM 199 (392)
Q Consensus 120 ~~~Y~plh~dly~lnpe~~l~p~f~~ai~~~~~~~~~~i~~ep~P~Vy~fpvftpefC~~LIeE~E~fg~Ws~gs~~~i~ 199 (392)
.++||+|+-..|.++|+.++.|+|..+...++++.|+++.+|+.|++|+||||++.||++++.++|+|+.|+.+++++|+
T Consensus 109 ~s~~q~l~~~~Y~~dp~~l~i~n~~~~~~~~~~~~~~~~~~e~~p~~~v~~~~~~~~~ea~~~evE~~r~~~~dad~~i~ 188 (415)
T KOG1971|consen 109 KSNLQRLLELDYPLDPENLFIPNFEVAHSANIKEFFRRHGSEYSPGKFVFPMFQPDFSEARLMEVEHFRKFSVDADFVIT 188 (415)
T ss_pred hhccccchhccCCCCHHHhccccccccchhccHHHHHHhccccCCeeEEeeccCccHHHHHHHHHHHhhhcccccceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccccccc--ChHHHHHHHHHHHhhhhhh---------------------hhcccccCCCCcccceeEEEEeC
Q 016264 200 RPNTMNKYGAVLDDF--GLETMLDKLMETYIRPLSK---------------------VFFAEVGGSTLDSHHGFVVEYGK 256 (392)
Q Consensus 200 rPn~mN~YgvvLddi--Gl~~~~~~Ll~~yl~Pl~~---------------------~LfPe~~g~~Ldsh~~FVVrY~~ 256 (392)
|||+|++|+++++++ +|+.+..+|.++|+.||++ .+||.+++..|++|++|++.|..
T Consensus 189 ~P~~~~~li~~~k~~ia~l~~~~~kL~enF~~al~~~~yyars~dy~~~v~g~~vg~~~~P~v~~~yl~~~~~f~~e~~~ 268 (415)
T KOG1971|consen 189 RPNTLRNLIVLNKEFIAPLVSRHGKLWENFWGALSADGYYARSEDYVDIVQGNRVGVWNVPYVCGAYLDSHDAFRVESSE 268 (415)
T ss_pred CChhHHHHHHHhhhccchhhhhhHHHHHHhhhhhccccchhhhhhhhhhhcccceeEEeecccceeEEecccceeeeccC
Confidence 999999999999999 9999999999999999999 99999999999999999999965
Q ss_pred C-CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCCCcCCccCCccc-
Q 016264 257 D-RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGH- 334 (392)
Q Consensus 257 ~-~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh~HeglpVTsG~- 334 (392)
+ .|+++++|+|++++|+|+||++.|+||+++|.+..|+.|.++ .+..++|+++|.+|+++||+|.|.|++.++++|+
T Consensus 269 ~~~Dpdm~~~~~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~-~~~~EiFdn~h~p~qa~LHrg~~~~~a~~~~~~~~ 347 (415)
T KOG1971|consen 269 DNRDPDMGFCVDAREVGLFVCLSNQFEGGELLFTGKYCTKHLRT-DDLWEIFDNSHDPGQAYLHRGYHKHGARATIVGQP 347 (415)
T ss_pred cCCCCccccccchhhcceeEEecccccCCeeEeeccccccccCC-CchhhhccCcCCCccceecCcchhccccccCCCCC
Confidence 5 999999999999999999999999999999999999999776 6788999999999999999999999999999999
Q ss_pred eeeEeeechhhhHHHHHhhhhccccccccchhhHHHHHHHHHHHhHHHHhhhhcC
Q 016264 335 RVNLLLWCRSSVFREMKRYQKDFSSWCGECFREKKERQRLSIAATKSELLKQEGE 389 (392)
Q Consensus 335 RynLV~W~rss~~R~~~~y~~~f~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
|-+++.||.++.||+|.+|+.+|+.||+.|+.+|++++.++..+||...++..+.
T Consensus 348 ~~nv~~~~~~~~c~el~~~me~f~~Ws~g~~~D~r~~~gye~~~trdi~m~q~~~ 402 (415)
T KOG1971|consen 348 CPNVYWFPISSLCDELVEEMEEFGRWSGGCAEDKRLAGGYENVPTRDIHMRQVGF 402 (415)
T ss_pred CCceeeehhHHHHHHHHHHHHHhhcccccchhhhhhcCCcccCCchhhHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999988764
No 2
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=99.83 E-value=3.9e-20 Score=175.93 Aligned_cols=160 Identities=24% Similarity=0.376 Sum_probs=115.3
Q ss_pred EEEec-CCCHHHHHHHHHHHHhhhhhhhccc-ccccccCCCCcccccccccChHHHHHHHHHHHhh--hhhhhhcccccC
Q 016264 166 VFTFE-MLQPRFCELLLAEVENFEKWVNEAK-FRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIR--PLSKVFFAEVGG 241 (392)
Q Consensus 166 Vy~fp-vftpefC~~LIeE~E~fg~Ws~gs~-~~i~rPn~mN~YgvvLddiGl~~~~~~Ll~~yl~--Pl~~~LfPe~~g 241 (392)
++.+| |||+++|+++|+.+|+- .|..|.. .....+...||..+..++. +...+...+..++. |+ |- .
T Consensus 2 i~~I~~vLs~eec~~~~~~le~~-~~~dg~~taG~~~~~vKnN~ql~~d~~-~a~~l~~~i~~~L~~~~l----~~---s 72 (226)
T PRK05467 2 LLHIPDVLSPEEVAQIRELLDAA-EWVDGRVTAGAQAAQVKNNQQLPEDSP-LARELGNLILDALTRNPL----FF---S 72 (226)
T ss_pred eeeecccCCHHHHHHHHHHHHhc-CCccCCcCcCccchhcccccccCCCCH-HHHHHHHHHHHHHhcCch----hh---h
Confidence 45564 99999999999999984 4654332 2222245677777777766 65433333334554 32 21 1
Q ss_pred CCCc--ccceeEEEEeCCCCCCCcccccCC-------------ceeEEEecc--ccccCcceEEccccccccccCCCCcc
Q 016264 242 STLD--SHHGFVVEYGKDRDVDLGFHVDDS-------------EVTLNVCLG--KQFTGGELFFRGTRCEKHVNTGSQTE 304 (392)
Q Consensus 242 ~~Ld--sh~~FVVrY~~~~d~~L~~H~D~S-------------evTLNI~Ln--~dFeGGgl~F~~~~c~~hv~~~~~~~ 304 (392)
..+. .+...+.||.+++ ++++|+|++ .+|++|+|| ++|+||+|.|......
T Consensus 73 a~lp~~i~~~~f~rY~~G~--~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~~g~---------- 140 (226)
T PRK05467 73 AALPRKIHPPLFNRYEGGM--SYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDTYGE---------- 140 (226)
T ss_pred hccccccccceEEEECCCC--ccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecCCCc----------
Confidence 1221 1223368999886 999999974 589999998 5799999999864321
Q ss_pred ceeeecCCCceEEEecCCCCcCCccCCccceeeEeeechhhhHHH
Q 016264 305 EIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFRE 349 (392)
Q Consensus 305 e~~~y~~~~G~AllHpGrh~HeglpVTsG~RynLV~W~rss~~R~ 349 (392)
..+++++|.+|+|++..+|+|.|||+|+||+++.|++|. +|+
T Consensus 141 --~~Vkp~aG~~vlfps~~lH~v~pVt~G~R~~~~~Wi~S~-v~~ 182 (226)
T PRK05467 141 --HRVKLPAGDLVLYPSTSLHRVTPVTRGVRVASFFWIQSL-VRD 182 (226)
T ss_pred --EEEecCCCeEEEECCCCceeeeeccCccEEEEEecHHHH-cCC
Confidence 346899999999999999999999999999999999987 454
No 3
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=99.80 E-value=3.9e-19 Score=159.57 Aligned_cols=162 Identities=26% Similarity=0.383 Sum_probs=108.3
Q ss_pred CcEEEec-CCCHHHHHHHHHHHHhhhhhhhccccccccc----CCCCcccccccccChHHHHHHHHHHHhhhhhhhhccc
Q 016264 164 PGVFTFE-MLQPRFCELLLAEVENFEKWVNEAKFRIMRP----NTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAE 238 (392)
Q Consensus 164 P~Vy~fp-vftpefC~~LIeE~E~fg~Ws~gs~~~i~rP----n~mN~YgvvLddiGl~~~~~~Ll~~yl~Pl~~~LfPe 238 (392)
|+||.++ +|++++|+.||++++.... ........+.+ ..++.....+++-.-+.+.+.+. +.|.. +++.
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~-~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~l~-~~i~~----~~~~ 74 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGW-RGEVTRGDTNPNHDSKYRQSNGTWLELLKGDLVIERIR-QRLAD----FLGL 74 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcc-cceeecCCCCccccCCCEeecceecCCCCCCHHHHHHH-HHHHH----HHCC
Confidence 7899996 9999999999999998653 21111111111 11222223333321112222222 22222 2321
Q ss_pred ccCCCCcccceeEEEEeCCCCCCCcccccCC--------ceeEEEeccccccCcceEEccccccccccCCCCccceeeec
Q 016264 239 VGGSTLDSHHGFVVEYGKDRDVDLGFHVDDS--------EVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYS 310 (392)
Q Consensus 239 ~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S--------evTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~ 310 (392)
..+.........+++|.+++ ++.+|+|.+ .+|++|+||++++||+|.|....+. ....+.
T Consensus 75 ~~~~~~~~~~~~~~~Y~~g~--~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~~~~~----------~~~~v~ 142 (178)
T smart00702 75 LRGLPLSAEDAQVARYGPGG--HYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPGLGLM----------VCATVK 142 (178)
T ss_pred CchhhccCcceEEEEECCCC--cccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecCCCCc----------cceEEe
Confidence 11111233456689999865 999999965 6999999999999999999986541 123568
Q ss_pred CCCceEEEecC---CCCcCCccCCccceeeEeeech
Q 016264 311 HVPGRAVLHRG---RHRHGARATTSGHRVNLLLWCR 343 (392)
Q Consensus 311 ~~~G~AllHpG---rh~HeglpVTsG~RynLV~W~r 343 (392)
|++|.+|+|+. +++|++.||++|+||++++|++
T Consensus 143 P~~G~~v~f~~~~~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 143 PKKGDLLFFPSGRGRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred CCCCcEEEEeCCCCCccccCCcceeCCEEEEEEEEC
Confidence 99999999997 5999999999999999999986
No 4
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=99.52 E-value=9e-14 Score=137.96 Aligned_cols=174 Identities=17% Similarity=0.284 Sum_probs=110.7
Q ss_pred CCcEEEec-CCCHHHHHHHHHHHHh-hhhhh--hc-ccccccccCCCCcccccccccChHHHHHHHHHHHhhhhhhhhcc
Q 016264 163 SPGVFTFE-MLQPRFCELLLAEVEN-FEKWV--NE-AKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFA 237 (392)
Q Consensus 163 ~P~Vy~fp-vftpefC~~LIeE~E~-fg~Ws--~g-s~~~i~rPn~mN~YgvvLddiGl~~~~~~Ll~~yl~Pl~~~LfP 237 (392)
.|.||.++ |||+++|+.||+..+. +.... .+ ++.... .+.+..+++.+++-. +.....+. +.|.-++ ..|
T Consensus 53 ~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~-s~~RTS~~~~l~~~~-dpvv~~I~-~Ria~~t--~lp 127 (310)
T PLN00052 53 QPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVM-SEVRTSSGMFLDKRQ-DPVVSRIE-ERIAAWT--FLP 127 (310)
T ss_pred CCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCcccc-CCCEEecceeecCCC-CHHHHHHH-HHHHHHh--CCC
Confidence 69999995 9999999999999875 22210 00 010000 122334555554322 23333332 2233221 112
Q ss_pred cccCCCCccc-ceeEEEEeCCCCCCCcccccC------------CceeEEEeccccccCcceEEccccccccccCC----
Q 016264 238 EVGGSTLDSH-HGFVVEYGKDRDVDLGFHVDD------------SEVTLNVCLGKQFTGGELFFRGTRCEKHVNTG---- 300 (392)
Q Consensus 238 e~~g~~Ldsh-~~FVVrY~~~~d~~L~~H~D~------------SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~---- 300 (392)
.... ..-|++|++++ .+.+|+|- ...|+.++||+..+||+|.|............
T Consensus 128 ------~~~~E~lQVlrY~~Gq--~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~~~~~~~~~~~~~s 199 (310)
T PLN00052 128 ------EENAENIQILRYEHGQ--KYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEGWENQPKDDTFS 199 (310)
T ss_pred ------cccCcceEEEecCCCC--CCCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCcccccccccccchh
Confidence 1111 23489999987 89999992 24899999999999999999975210000000
Q ss_pred CCccceeeecCCCceEEEecCC---------CCcCCccCCccceeeEeeechhhhHHH
Q 016264 301 SQTEEIFDYSHVPGRAVLHRGR---------HRHGARATTSGHRVNLLLWCRSSVFRE 349 (392)
Q Consensus 301 ~~~~e~~~y~~~~G~AllHpGr---------h~HeglpVTsG~RynLV~W~rss~~R~ 349 (392)
.-.+.-+.+.|++|.||+|..- .+|+|.||++|++|++..|++...|..
T Consensus 200 ~c~~~gl~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~~~~~ 257 (310)
T PLN00052 200 ECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIRSYEH 257 (310)
T ss_pred hhhcCCeEeccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEEeeecccccC
Confidence 0001235679999999999984 599999999999999999999877754
No 5
>PHA02813 hypothetical protein; Provisional
Probab=99.31 E-value=9.9e-12 Score=124.54 Aligned_cols=154 Identities=13% Similarity=0.214 Sum_probs=107.5
Q ss_pred CcEEEecCCCHHHHH----HHHHHHHhhh--hhhhccc------ccccccCCCCcccccccccChHHHHHHHHHHHhhhh
Q 016264 164 PGVFTFEMLQPRFCE----LLLAEVENFE--KWVNEAK------FRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPL 231 (392)
Q Consensus 164 P~Vy~fpvftpefC~----~LIeE~E~fg--~Ws~gs~------~~i~rPn~mN~YgvvLddiGl~~~~~~Ll~~yl~Pl 231 (392)
.++.+.-+|+...-. .|+.+++ +. .|....- ...+.++.+|+-.|++++. +.+|+++.. +|.+-
T Consensus 5 ~~~l~~~~F~~~~f~~~k~~l~~~i~-~~d~~~~~s~i~~~~~~ge~l~~~iRnNkrviid~~--~~L~erIr~-~Lp~~ 80 (354)
T PHA02813 5 DGIIKVKTFNDDYFNNVKKIIMDMIK-YKDIIWEESKVFDHEKGGEVINTNERQCKQYIIRGL--DDIFKVIRK-KLLLS 80 (354)
T ss_pred CCceEEEEecHHHHHHHHHHHHHHHh-ccccCccccceeccccCceEEccccccceEEEEcCH--HHHHHHHHH-hhHHH
Confidence 466777888888333 3444444 11 2432111 1245567788999999988 777877654 33321
Q ss_pred hhhhcccccCCCCcccceeEEEEeCCCCCCCcccccC--------CceeEEEeccccccCcceEEccccccccccCCCCc
Q 016264 232 SKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDD--------SEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQT 303 (392)
Q Consensus 232 ~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~--------SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~ 303 (392)
.. -++-+...+++.+..| ++|.+|+ .|.+|.|. |.+||.++||+.++||+|.|.-....
T Consensus 81 l~-~~~lv~~V~vnerirf-yrY~kGq--~F~~H~Dg~~~r~k~~s~~tLLLYLN~~~~GGeT~f~~~~~t--------- 147 (354)
T PHA02813 81 FE-FPQKISDIILDNTITL-IKYEKGD--FFNNHRDFIHFKSKNCYCYHLVLYLNNTSKGGNTNIHIKDNT--------- 147 (354)
T ss_pred hc-CCccceeEEEcceEEE-EEECCCc--ccCcccCCceeecCCceEEEEEEEEeccCCCCceEEEcCCCc---------
Confidence 10 0111112466788887 9999988 89999884 56899999999999999999954221
Q ss_pred cceeeecCCCceEEEecCCCCcCCccCCccceeeEee
Q 016264 304 EEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLL 340 (392)
Q Consensus 304 ~e~~~y~~~~G~AllHpGrh~HeglpVTsG~RynLV~ 340 (392)
+..+|.+|||.++..|+|.+|++|++|+|++
T Consensus 148 ------sI~~g~dlLFdh~l~Heg~~V~sG~KyVa~~ 178 (354)
T PHA02813 148 ------IFSTKNDVLFDKTLNHSSDIITDGEKNIALI 178 (354)
T ss_pred ------eEeecceEEEecccccCCcEeccCeEEEEEE
Confidence 1238999999999999999999999999975
No 6
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=99.11 E-value=1.5e-09 Score=101.41 Aligned_cols=164 Identities=21% Similarity=0.326 Sum_probs=103.2
Q ss_pred cEEEec-CCCHHHHHHHHHHHHhhhhhhhcccc-cccccCCCCcccccccccChHHHHHHHHHHHhhhhhhhhccc-ccC
Q 016264 165 GVFTFE-MLQPRFCELLLAEVENFEKWVNEAKF-RIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAE-VGG 241 (392)
Q Consensus 165 ~Vy~fp-vftpefC~~LIeE~E~fg~Ws~gs~~-~i~rPn~mN~YgvvLddiGl~~~~~~Ll~~yl~Pl~~~LfPe-~~g 241 (392)
..+.+| |||+..|.++-+.++.- .|+.|.-. .-.-+...||-.+.-+. .++..+..++-+-+.-. .++|.- ...
T Consensus 3 m~lhIp~VLs~a~va~iRa~l~~A-~w~dGrat~g~q~a~vk~n~qlp~~s-~l~~~vg~~il~al~~~-plff~aALp~ 79 (229)
T COG3128 3 MMLHIPEVLSEAQVARIRAALEQA-EWVDGRATQGPQGAQVKNNLQLPQDS-ALARELGNEILQALTAH-PLFFAAALPR 79 (229)
T ss_pred eEEechhhCCHHHHHHHHHHHhhc-cccccccccCcchhhhhccccCCccc-HHHHHHHHHHHHHHHhc-hhHHHhhccc
Confidence 456666 99999999998888763 57654432 11112334443333222 22222222221111110 012210 010
Q ss_pred CCCcccceeEEEEeCCCCCCCcccccCC--------------ceeEEEecc--ccccCcceEEccccccccccCCCCccc
Q 016264 242 STLDSHHGFVVEYGKDRDVDLGFHVDDS--------------EVTLNVCLG--KQFTGGELFFRGTRCEKHVNTGSQTEE 305 (392)
Q Consensus 242 ~~Ldsh~~FVVrY~~~~d~~L~~H~D~S--------------evTLNI~Ln--~dFeGGgl~F~~~~c~~hv~~~~~~~e 305 (392)
..+.. . +-+|..+. .|++|+|+. .++.|..|+ +||+||+|...+.-..
T Consensus 80 t~~~P--~-Fn~Y~eg~--~f~fHvDgavr~~hp~~~~~lrtdls~tlfl~DPedYdGGeLVv~dtYg~----------- 143 (229)
T COG3128 80 TCLPP--L-FNRYQEGD--FFGFHVDGAVRSIHPGSGFRLRTDLSCTLFLSDPEDYDGGELVVNDTYGN----------- 143 (229)
T ss_pred ccCCc--h-hhhccCCC--cccccccCcccccCCCCCceeEeeeeeeeecCCccccCCceEEEeccccc-----------
Confidence 11111 1 26787766 899999953 366777776 6999999999987543
Q ss_pred eeeecCCCceEEEecCCCCcCCccCCccceeeEeeechhhhHHH
Q 016264 306 IFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFRE 349 (392)
Q Consensus 306 ~~~y~~~~G~AllHpGrh~HeglpVTsG~RynLV~W~rss~~R~ 349 (392)
..++.+.|..|++|+..+|++.|||.|.|+..+.|.+|. +|+
T Consensus 144 -h~VklPAGdLVlypStSlH~VtPVTRg~R~asffW~qsl-ir~ 185 (229)
T COG3128 144 -HRVKLPAGDLVLYPSTSLHEVTPVTRGERFASFFWIQSL-IRD 185 (229)
T ss_pred -eEEeccCCCEEEcccccceeccccccCceEEEeeehHHH-hhh
Confidence 245688899999999999999999999999999999976 676
No 7
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=99.00 E-value=3.8e-10 Score=92.09 Aligned_cols=83 Identities=29% Similarity=0.510 Sum_probs=62.5
Q ss_pred EEEEeCCCCCCCcccccC-----CceeEEEeccc-c--ccCcceEEccccccccccCCCCccceeeec-----CCCceEE
Q 016264 251 VVEYGKDRDVDLGFHVDD-----SEVTLNVCLGK-Q--FTGGELFFRGTRCEKHVNTGSQTEEIFDYS-----HVPGRAV 317 (392)
Q Consensus 251 VVrY~~~~d~~L~~H~D~-----SevTLNI~Ln~-d--FeGGgl~F~~~~c~~hv~~~~~~~e~~~y~-----~~~G~Al 317 (392)
+.+|.++. .+.+|.|. ..+|+.++||+ + ++||+|.|.... .. ......+. |.+|.+|
T Consensus 3 ~~~y~~G~--~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~~-------~~~~~~~~~~~~~p~~g~~v 72 (100)
T PF13640_consen 3 LNRYPPGG--FFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSK-DS-------DDVSREVEDFDIVPKPGRLV 72 (100)
T ss_dssp EEEEETTE--EEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS--T-------SSTCEEEGGGSEE-BTTEEE
T ss_pred EEEECcCC--EEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccc-cC-------CCcceEEEeccccCCCCEEE
Confidence 46787765 99999999 35899999994 3 799999999753 10 00111223 9999999
Q ss_pred EecC-CCCcCCccC-CccceeeEeeech
Q 016264 318 LHRG-RHRHGARAT-TSGHRVNLLLWCR 343 (392)
Q Consensus 318 lHpG-rh~HeglpV-TsG~RynLV~W~r 343 (392)
+|++ ..+|++.|| ..|+|++++.|++
T Consensus 73 ~F~~~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 73 IFPSDNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp EEESCTCEEEEEEE-EESEEEEEEEEEE
T ss_pred EEeCCCCeecCcccCCCCCEEEEEEEEC
Confidence 9999 899999999 9999999999974
No 8
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=4.3e-10 Score=114.73 Aligned_cols=107 Identities=21% Similarity=0.446 Sum_probs=84.4
Q ss_pred HHHHHhHH-hhcCC--CCCc-ccccc--Cc----cccCCchhHHHhhhccHhhhhccccccCCcEEEecCCCHHHHHHHH
Q 016264 112 HRDYRQKI-ITNYQ--PLHR-ELYNL--HI----GNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLL 181 (392)
Q Consensus 112 ~~~~r~~i-~~~Y~--plh~-dly~l--np----e~~l~p~f~~ai~~~~~~~~~~i~~ep~P~Vy~fpvftpefC~~LI 181 (392)
..+..+.+ ...|+ ++++ ++|+| |+ +.|||+.|.++...+ .++.++||+|||||++ .+|++|+
T Consensus 293 q~~gG~L~~~~~~~~~h~~~~~~~EiFdn~h~p~qa~LHrg~~~~~a~~------~~~~~~~~nv~~~~~~--~~c~el~ 364 (415)
T KOG1971|consen 293 QFEGGELLFTGKYCTKHLRTDDLWEIFDNSHDPGQAYLHRGYHKHGARA------TIVGQPCPNVYWFPIS--SLCDELV 364 (415)
T ss_pred cccCCeeEeeccccccccCCCchhhhccCcCCCccceecCcchhccccc------cCCCCCCCceeeehhH--HHHHHHH
Confidence 33444443 35676 6666 99998 33 899999999999886 5789999999999999 9999999
Q ss_pred HHHHhhhhhhhcccccccccCCCCccc------ccccccChHHHHHHHHHHHhh
Q 016264 182 AEVENFEKWVNEAKFRIMRPNTMNKYG------AVLDDFGLETMLDKLMETYIR 229 (392)
Q Consensus 182 eE~E~fg~Ws~gs~~~i~rPn~mN~Yg------vvLddiGl~~~~~~Ll~~yl~ 229 (392)
+++++|++|++|.+...+. ...|. +.+.++|++..|.+++..|++
T Consensus 365 ~~me~f~~Ws~g~~~D~r~---~~gye~~~trdi~m~q~~~e~~~~~~~~~~~~ 415 (415)
T KOG1971|consen 365 EEMEEFGRWSGGCAEDKRL---AGGYENVPTRDIHMRQVGFERLWLKFLRTYVR 415 (415)
T ss_pred HHHHHhhcccccchhhhhh---cCCcccCCchhhHHHhhhhHHHHHHHHHHhhC
Confidence 9999999999988875432 22233 347779999999999998874
No 9
>PHA02869 C4L/C10L-like gene family protein; Provisional
Probab=98.96 E-value=3.7e-09 Score=107.78 Aligned_cols=82 Identities=21% Similarity=0.171 Sum_probs=70.0
Q ss_pred CCCCcccceeEEEEeCCCCCCCcccccC--------CceeEEEeccccccCcceEEccccccccccCCCCccceeeecCC
Q 016264 241 GSTLDSHHGFVVEYGKDRDVDLGFHVDD--------SEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHV 312 (392)
Q Consensus 241 g~~Ldsh~~FVVrY~~~~d~~L~~H~D~--------SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~ 312 (392)
..+++.+.+| ++|.+|+ .|.+|.|. |.+||.|+||+.++||+|.|.-..+ ..+.|+
T Consensus 98 ~V~lnerirf-yrY~kGq--~F~~H~Dg~~~rs~e~s~~tLLLYLNd~~~GGET~f~~~~~-------------~sI~pk 161 (418)
T PHA02869 98 SVTVENTVTL-IMYEKGD--YFARHRDFSTVFSKNIICVHLLLYLEQPETGGETVIYIDNN-------------TSVKLK 161 (418)
T ss_pred eEEEcceEEE-EEECCCC--cccccccCceecCCCEEEEEEEEEEeccCCCCceEEEeCCC-------------ceEecC
Confidence 3467888887 9999988 99999996 5699999999999999999996221 235789
Q ss_pred CceEEEecCCCCcCCccCCccceeeEee
Q 016264 313 PGRAVLHRGRHRHGARATTSGHRVNLLL 340 (392)
Q Consensus 313 ~G~AllHpGrh~HeglpVTsG~RynLV~ 340 (392)
+| |||.++..|+|.+|++|++|+|..
T Consensus 162 sg--LLFdh~l~Heg~~V~sG~KyVart 187 (418)
T PHA02869 162 TD--HLFDKTIEHESITVESGRKCVALF 187 (418)
T ss_pred CC--eEeccccccCCcEeecCeEEEEEE
Confidence 99 999999999999999999999853
No 10
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=98.37 E-value=4.5e-07 Score=73.83 Aligned_cols=79 Identities=25% Similarity=0.303 Sum_probs=57.9
Q ss_pred eeEEEEe-CCCCCCCcccccC--CceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC---
Q 016264 249 GFVVEYG-KDRDVDLGFHVDD--SEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--- 322 (392)
Q Consensus 249 ~FVVrY~-~~~d~~L~~H~D~--SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr--- 322 (392)
..+.+|. ++.+..+++|+|. +.+|++++ .++|||.|....+ ...+.+.++..+|..|.
T Consensus 4 ~~~~~Y~~~~~~~~~~~H~D~~~~~~Til~~----~~~~gL~~~~~~~------------~~~v~~~~~~~~v~~G~~l~ 67 (98)
T PF03171_consen 4 LRLNRYPPPENGVGIGPHTDDEDGLLTILFQ----DEVGGLQVRDDGE------------WVDVPPPPGGFIVNFGDALE 67 (98)
T ss_dssp EEEEEE-SCCGCEEEEEEEES--SSEEEEEE----TSTS-EEEEETTE------------EEE----TTCEEEEEBHHHH
T ss_pred EEEEECCCcccCCceeCCCcCCCCeEEEEec----ccchheecccccc------------ccCccCccceeeeeceeeee
Confidence 4578999 6678899999999 99999998 7899999997542 23446777888888887
Q ss_pred ---------CCcCCccCCccceeeEeeech
Q 016264 323 ---------HRHGARATTSGHRVNLLLWCR 343 (392)
Q Consensus 323 ---------h~HeglpVTsG~RynLV~W~r 343 (392)
.+|++.+++.|.|++++.|++
T Consensus 68 ~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~ 97 (98)
T PF03171_consen 68 ILTNGRYPATLHRVVPPTEGERYSLTFFLR 97 (98)
T ss_dssp HHTTTSS----EEEE--STS-EEEEEEEEE
T ss_pred cccCCccCCceeeeEcCCCCCEEEEEEEEC
Confidence 899999999999999999986
No 11
>KOG1591 consensus Prolyl 4-hydroxylase alpha subunit [Amino acid transport and metabolism]
Probab=98.12 E-value=1.7e-05 Score=78.67 Aligned_cols=160 Identities=21% Similarity=0.248 Sum_probs=98.3
Q ss_pred CCcEEEec-CCCHHHHHHHHHHHHh-hhhhhh-cccc-cccccC-CCCcccccccccChHHHHHHHHHHHhhhhhhhhcc
Q 016264 163 SPGVFTFE-MLQPRFCELLLAEVEN-FEKWVN-EAKF-RIMRPN-TMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFA 237 (392)
Q Consensus 163 ~P~Vy~fp-vftpefC~~LIeE~E~-fg~Ws~-gs~~-~i~rPn-~mN~YgvvLddiGl~~~~~~Ll~~yl~Pl~~~LfP 237 (392)
.|.|+.|+ |+++++|+.||+..+. ...+.- ..+. ..-... .+.--|.-+.+ +-... -..+++.|.-++. +|
T Consensus 96 ~P~~~~yhd~ls~~e~d~l~~lak~~l~~stv~~~~~~~~~~~~~~R~S~~t~l~~-~~~~~-~~~i~~ri~~~T~--l~ 171 (289)
T KOG1591|consen 96 DPRVVLYHDFLSDEECDHLISLAKPKLERSTVVADKGTGHSTTSAVRTSSGTFLPD-GASPV-VSRIEQRIADLTG--LP 171 (289)
T ss_pred CCceEeehhcCCHHHHHHHHHhhhhhhhceeeeccCCcccccceeeEecceeEecC-CCCHH-HHHHHHHHHhccC--CC
Confidence 48899995 9999999999998663 333211 0000 000000 00111222333 22211 1222223332211 11
Q ss_pred cccCCCCcccceeEEEEeCCCCCCCcccccCCc----------------eeEEEeccccccCcceEEccccccccccCCC
Q 016264 238 EVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE----------------VTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 301 (392)
Q Consensus 238 e~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~Se----------------vTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~ 301 (392)
--.+-. --|+.|+.++ ++.+|+|-.. -|+.++|++.=+||+|.|....-.
T Consensus 172 ~e~~E~-----lqVlnYg~Gg--~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~l~yls~v~~GG~TvFP~~~~~------- 237 (289)
T KOG1591|consen 172 VENGES-----LQVLNYGLGG--HYEPHYDYFLPEEDETFNGLNGGNRIATVLMYLSDVEQGGETVFPNLGMK------- 237 (289)
T ss_pred cccCcc-----ceEEEecCCc--cccccccccccccchhhhhcccCCcceeEEEEecccCCCCcccCCCCCCc-------
Confidence 111111 1278999877 9999988431 388899999999999999987531
Q ss_pred CccceeeecCCCceEEEecC---------CCCcCCccCCccceeeEeeechhh
Q 016264 302 QTEEIFDYSHVPGRAVLHRG---------RHRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 302 ~~~e~~~y~~~~G~AllHpG---------rh~HeglpVTsG~RynLV~W~rss 345 (392)
..+.|++|.|+++-- +-.|+|.||..|.||+...|+|-.
T Consensus 238 -----~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~~wi~~~ 285 (289)
T KOG1591|consen 238 -----PAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIATKWIHEK 285 (289)
T ss_pred -----ccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeeeeeeeec
Confidence 235799999998642 278999999999999999999854
No 12
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [].; PDB: 3GJA_A 3EMR_A 3OBZ_A 2OPW_A 3NNL_B 3NNF_A 3NNM_B 3NNJ_A 2FCV_B 2FCU_A ....
Probab=97.17 E-value=0.01 Score=52.19 Aligned_cols=169 Identities=14% Similarity=0.145 Sum_probs=80.0
Q ss_pred cEEEe-cCCCHHHHHHHHHHHHhh--hhhhhcccccccccCC-CCcccccc-cccChHHHHHHHHHH-Hhhhhhhhhccc
Q 016264 165 GVFTF-EMLQPRFCELLLAEVENF--EKWVNEAKFRIMRPNT-MNKYGAVL-DDFGLETMLDKLMET-YIRPLSKVFFAE 238 (392)
Q Consensus 165 ~Vy~f-pvftpefC~~LIeE~E~f--g~Ws~gs~~~i~rPn~-mN~YgvvL-ddiGl~~~~~~Ll~~-yl~Pl~~~LfPe 238 (392)
|...+ .+|+++.|+.|.++++.. ..+..+.+........ ...+...+ ++. ..+..++.. .+..+++.++..
T Consensus 5 Gyvvi~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~ 81 (211)
T PF05721_consen 5 GYVVIRNVLSPEEVERLREELDRLDDRALEPDQDVSDFFDESFFGDYTEQLAKSP---NFYDLFLHPPRILDLVRALLGS 81 (211)
T ss_dssp SEEEETTSS-HHHHHHHHHHHHHHHHHHTTTTTSCEEEESTSCCCTCCCCGCCCH---HHHHHHHTHHHHHHHHHHHHTS
T ss_pred cEEEECCcCCHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccch---hhHHHHhhHHHHHHHHHHhhCC
Confidence 45555 599999999999999986 2221111111111111 11111111 111 233444444 455555555521
Q ss_pred ccCCCCcccceeEEEEe-CCCCCC-CcccccC---------CceeEEEeccc-cccCcceEEccccccc--c-----ccC
Q 016264 239 VGGSTLDSHHGFVVEYG-KDRDVD-LGFHVDD---------SEVTLNVCLGK-QFTGGELFFRGTRCEK--H-----VNT 299 (392)
Q Consensus 239 ~~g~~Ldsh~~FVVrY~-~~~d~~-L~~H~D~---------SevTLNI~Ln~-dFeGGgl~F~~~~c~~--h-----v~~ 299 (392)
-.......+..+..-+. ++.+.. ..+|.|. ..+|+.|+|.+ .=+.|++.+....-.. . ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~wH~D~~~~~~~~~~~~~~~wi~L~d~~~~~G~~~v~pGSH~~~~~~~~~~~~~ 161 (211)
T PF05721_consen 82 DVFVQNWLQSMYQDIVKPPGPGAAVQPWHQDAPYWHTDPPENQLTVWIALDDITPENGPLEVVPGSHKWGVEPHEERFPE 161 (211)
T ss_dssp SEEEE--EEEEEEEEEE-TTTTC-EEEEBEHHHCSTEESSSCEEEEEEESS-BBTTCTCEEEETTGCCSCCEEECCCCCC
T ss_pred cchhhhhhHHHHHhhhhccccCCCCCCCCCCCcccccCCccceEEEEEeeccCCcccCceEeecCCcCCCcccccccccc
Confidence 10000000111100122 333334 5899993 23788899975 3456667765321000 0 000
Q ss_pred CC-----------CccceeeecCCCceEEEecCCCCcCCcc-CCcccee
Q 016264 300 GS-----------QTEEIFDYSHVPGRAVLHRGRHRHGARA-TTSGHRV 336 (392)
Q Consensus 300 ~~-----------~~~e~~~y~~~~G~AllHpGrh~Heglp-VTsG~Ry 336 (392)
.. .......+..++|.+|+|.++.+|++.+ .|.+.|-
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~Gdvl~~~~~~~H~s~~N~s~~~R~ 210 (211)
T PF05721_consen 162 EDFPEEDDEESDEDEDEWVPVPMKAGDVLFFHSRLIHGSGPNTSDDPRR 210 (211)
T ss_dssp CCCCCCHHHHHHHHCSGCEEE-BSTTEEEEEETTSEEEEE-B-SSSTEE
T ss_pred cccccccccccccccCceEEeecCCCeEEEEcCCccccCCCCCCcCcCC
Confidence 00 0134456778999999999999999999 5555564
No 13
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=97.13 E-value=0.00078 Score=61.95 Aligned_cols=72 Identities=22% Similarity=0.445 Sum_probs=62.3
Q ss_pred CCCCCcccccC----CceeEEEeccc-cccCcceEEcc-----ccccccccCCCCccceeeecCCCceEEEecCC-CCcC
Q 016264 258 RDVDLGFHVDD----SEVTLNVCLGK-QFTGGELFFRG-----TRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR-HRHG 326 (392)
Q Consensus 258 ~d~~L~~H~D~----SevTLNI~Ln~-dFeGGgl~F~~-----~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr-h~He 326 (392)
.+.....|+|. ..+|+.+.|+. ||+||-+.+.+ .+.. +.+.+|..|++.|+ .+|+
T Consensus 83 ~nr~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~--------------~~~~~GtVl~~~~~~~~Hg 148 (171)
T PF12851_consen 83 SNRCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVA--------------FAYQPGTVLIFCAKRELHG 148 (171)
T ss_pred eecCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEE--------------EecCCCcEEEEcccceeee
Confidence 35578899997 67899999985 59999999998 5433 36899999999999 9999
Q ss_pred CccCCc-----cceeeEeeech
Q 016264 327 ARATTS-----GHRVNLLLWCR 343 (392)
Q Consensus 327 glpVTs-----G~RynLV~W~r 343 (392)
..||.+ |+|+-||.|.|
T Consensus 149 vtpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 149 VTPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred cCcccCCCCCCCeEEEEEEEeE
Confidence 999998 99999999876
No 14
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=97.13 E-value=0.00098 Score=61.63 Aligned_cols=82 Identities=27% Similarity=0.411 Sum_probs=60.3
Q ss_pred eEEEEeCCCCCCCcccccC-Cc----eeEEEecc---ccccCcceEEccccccccccCCCCccceeeecCCCceEEEecC
Q 016264 250 FVVEYGKDRDVDLGFHVDD-SE----VTLNVCLG---KQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRG 321 (392)
Q Consensus 250 FVVrY~~~~d~~L~~H~D~-Se----vTLNI~Ln---~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpG 321 (392)
.+.+|+++. .-..|.|- .+ +-+-|.|+ +||+|||...-..+..- . .+...+.++.|.|+||.-
T Consensus 65 lllrY~~gd--yn~LHqdlyGe~vFPlQvv~lLs~Pg~DftGGEFVltEQrPR~--Q-----SR~~V~~L~qGda~if~t 135 (173)
T PF09859_consen 65 LLLRYGPGD--YNCLHQDLYGEHVFPLQVVILLSEPGEDFTGGEFVLTEQRPRM--Q-----SRAMVLPLRQGDALIFAT 135 (173)
T ss_pred hhheeCCCC--ccccccCCCCCcccCeEEEEEcCCCCCcccCceEEEEEecCCc--c-----CccccCCcCCCCEEEEec
Confidence 367898866 88888883 22 34455554 69999999998765321 1 233456889999999975
Q ss_pred C--------------CCcCCccCCccceeeEee
Q 016264 322 R--------------HRHGARATTSGHRVNLLL 340 (392)
Q Consensus 322 r--------------h~HeglpVTsG~RynLV~ 340 (392)
+ .+|+.-+|.+|+||.|-+
T Consensus 136 ~~RPv~G~rG~yRv~~RHgVS~vrsG~R~tLgl 168 (173)
T PF09859_consen 136 NHRPVRGARGYYRVNMRHGVSRVRSGERHTLGL 168 (173)
T ss_pred CCCCcCCCccceecccccccccccccceEEEEE
Confidence 4 689999999999999854
No 15
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=96.95 E-value=0.027 Score=54.98 Aligned_cols=174 Identities=17% Similarity=0.249 Sum_probs=89.3
Q ss_pred CcEEEe-cCCCHHHHHHHHHHHHhhhhhh--hcccccccccCCCCcccccccccChHHHHHHHHH-HHhhhhhhhhcc-c
Q 016264 164 PGVFTF-EMLQPRFCELLLAEVENFEKWV--NEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLME-TYIRPLSKVFFA-E 238 (392)
Q Consensus 164 P~Vy~f-pvftpefC~~LIeE~E~fg~Ws--~gs~~~i~rPn~mN~YgvvLddiGl~~~~~~Ll~-~yl~Pl~~~LfP-e 238 (392)
-|...+ .+|+++.|+.|.++++...... ......+. ....+..+.+++.......+.+|+. .-|..+++.|+. +
T Consensus 28 dGyvvl~~vls~eev~~lr~~i~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~l~~~p~l~~~~~~LlG~~ 106 (277)
T TIGR02408 28 DGFLLLENLFSDDEVAALLAEVERMTRDPAIVRDEEAIT-EPGSNAVRSIFEVHVLSPILARLVRDPRVANAARQILGSD 106 (277)
T ss_pred CCEEECcccCCHHHHHHHHHHHHHHHhcccccCCCccee-cCCCCceEEEecccccCHHHHHHHcChHHHHHHHHHcCCC
Confidence 366666 5999999999999998764310 00000000 0111222233333333343433332 223333333331 1
Q ss_pred ccCCCCcccceeEEEEeCC-CCCCCcccccCC------------ceeEEEecccc-ccCcceEEcccccccccc-CCCC-
Q 016264 239 VGGSTLDSHHGFVVEYGKD-RDVDLGFHVDDS------------EVTLNVCLGKQ-FTGGELFFRGTRCEKHVN-TGSQ- 302 (392)
Q Consensus 239 ~~g~~Ldsh~~FVVrY~~~-~d~~L~~H~D~S------------evTLNI~Ln~d-FeGGgl~F~~~~c~~hv~-~~~~- 302 (392)
+ .+ .+..++.+ ++ ....+.||.|.+ .+|+-|+|.+- =+-|.|.|....-...+. ....
T Consensus 107 ~---~l-~~~~l~~k--p~~~g~~~~WHQD~~~w~~~~~~p~~~~vt~wiaLdD~t~eNG~l~vIPGSH~~~~~~~~~~~ 180 (277)
T TIGR02408 107 V---YV-HQSRINMK--PGFKGTGFYWHSDFETWHAEDGMPSMRAVSCSIALTDNNETNGPLMLVPGSHRTFISCVGETP 180 (277)
T ss_pred e---EE-Eeeeeeec--CCCCCCCccCCcCCccccccCCCCCcCeEEEEEEcccCCCCCCCEEEecCCCCCcccCCcccc
Confidence 1 11 11223333 43 345778899843 37888899763 444777776421110000 0000
Q ss_pred --------------------------ccceeeecCCCceEEEecCCCCcCCccCCccc-eeeEeeechhh
Q 016264 303 --------------------------TEEIFDYSHVPGRAVLHRGRHRHGARATTSGH-RVNLLLWCRSS 345 (392)
Q Consensus 303 --------------------------~~e~~~y~~~~G~AllHpGrh~HeglpVTsG~-RynLV~W~rss 345 (392)
......+..++|.+|+|.+..+|++-+-++.. |.+++ -.+++
T Consensus 181 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~~aGDvl~f~~~~~H~S~~N~s~~~R~~l~-l~y~~ 249 (277)
T TIGR02408 181 RDNYKQSLKKQEYGVPDPVSLTKLADQGGISTFTGKAGSAVWFDCNTMHGSGSNITPWPRSNVF-MVFNS 249 (277)
T ss_pred chhhhhhhhhhhcCCCCHHHHHHHHHhCCceeeccCCceEEEEccccccCCCCCCCCCcceeEE-EEEec
Confidence 00122345699999999999999999988776 44444 34433
No 16
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=96.69 E-value=0.04 Score=54.51 Aligned_cols=40 Identities=10% Similarity=0.143 Sum_probs=31.7
Q ss_pred eeeecCCCceEEEecCCCCcCCccCCcc--ceeeEee-echhh
Q 016264 306 IFDYSHVPGRAVLHRGRHRHGARATTSG--HRVNLLL-WCRSS 345 (392)
Q Consensus 306 ~~~y~~~~G~AllHpGrh~HeglpVTsG--~RynLV~-W~rss 345 (392)
.+....++|.+++|.+..+|++-+-+|. .|..+++ |+.++
T Consensus 208 ~v~~~lkaGd~~~f~~~t~HgS~~N~S~~~~R~~~~~ry~~~~ 250 (288)
T TIGR01762 208 AVPMQMKAGQFIIFWSTLMHASYPNSGESQMRMGFASRYVPSF 250 (288)
T ss_pred eeeeeeCCceEEEECCCceecCCCCCCCCceEEEEEEEEcCCC
Confidence 4566779999999999999999999884 3777655 66554
No 17
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily
Probab=96.26 E-value=0.0058 Score=48.01 Aligned_cols=39 Identities=38% Similarity=0.685 Sum_probs=31.7
Q ss_pred EEEeCCCCCCCcccccCCc--------eeEEEecc----ccccCcceEEcccc
Q 016264 252 VEYGKDRDVDLGFHVDDSE--------VTLNVCLG----KQFTGGELFFRGTR 292 (392)
Q Consensus 252 VrY~~~~d~~L~~H~D~Se--------vTLNI~Ln----~dFeGGgl~F~~~~ 292 (392)
++|.. +..+.+|+|+.. +|+.|+|| ++|+||.++|....
T Consensus 16 ~~~~~--g~~~~~H~D~~~~~~~~~r~~t~llYLn~~w~~d~~Gg~~~f~~~~ 66 (70)
T PF13661_consen 16 YRYRR--GDFFGWHVDADPSSSGKRRFLTLLLYLNEDWDEDFGGGELFFDDDG 66 (70)
T ss_pred EEcCC--CCEeeeeEcCCccccccceeEEEEEEecccccCccCCcEEEEeCCC
Confidence 55555 449999999643 89999999 79999999998753
No 18
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=96.00 E-value=0.17 Score=47.92 Aligned_cols=88 Identities=15% Similarity=0.203 Sum_probs=59.1
Q ss_pred ceeEEEEeCCCCCCCccccc-CCceeEEEeccccccCcceEEccccccccccC-----CC--CccceeeecCCCceEEEe
Q 016264 248 HGFVVEYGKDRDVDLGFHVD-DSEVTLNVCLGKQFTGGELFFRGTRCEKHVNT-----GS--QTEEIFDYSHVPGRAVLH 319 (392)
Q Consensus 248 ~~FVVrY~~~~d~~L~~H~D-~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~-----~~--~~~e~~~y~~~~G~AllH 319 (392)
...++.+.++. .-..|.- +|-++-..+|.-.=.+|.+.|...+....+.. .. .-.....+.|++|..|||
T Consensus 97 ~~W~ni~~~Gg--~h~~H~Hp~~~lSgvyYl~~p~~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~P~~G~lvlF 174 (201)
T TIGR02466 97 KAWVNILPQGG--THSPHLHPGSVISGTYYVQTPENCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVPPQEGRVLLF 174 (201)
T ss_pred eEeEEEcCCCC--ccCceECCCceEEEEEEEeCCCCCCceeEecCcchhhhccccccCccccccCccEEECCCCCeEEEE
Confidence 56788887765 5555544 67899999997544688898876543211100 00 011233468999999999
Q ss_pred cCCCCcCCccCCcc-ceee
Q 016264 320 RGRHRHGARATTSG-HRVN 337 (392)
Q Consensus 320 pGrh~HeglpVTsG-~Ryn 337 (392)
|+.++|++.|-.+. .|..
T Consensus 175 PS~L~H~v~p~~~~~~RIS 193 (201)
T TIGR02466 175 ESWLRHEVPPNESEEERIS 193 (201)
T ss_pred CCCCceecCCCCCCCCEEE
Confidence 99999999999874 5544
No 19
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=95.76 E-value=0.088 Score=47.61 Aligned_cols=154 Identities=18% Similarity=0.299 Sum_probs=74.9
Q ss_pred cEEEec-CCCHHHHHHHHHHHHhhhhhhhccccc--c-cccCC-C---------C--cccc--cccccChH---HHHHHH
Q 016264 165 GVFTFE-MLQPRFCELLLAEVENFEKWVNEAKFR--I-MRPNT-M---------N--KYGA--VLDDFGLE---TMLDKL 223 (392)
Q Consensus 165 ~Vy~fp-vftpefC~~LIeE~E~fg~Ws~gs~~~--i-~rPn~-m---------N--~Ygv--vLddiGl~---~~~~~L 223 (392)
|+|.+| +|++++.++|++++..-..|....... . ..+.. . . +|.. ..+...+. ..+..+
T Consensus 1 G~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~y~~~~~~~~~~~~~~p~~l~~~ 80 (194)
T PF13532_consen 1 GLYYIPNFLSEEEAAELLNELRESAPFRQPTYPMGKVYSLPRKLCGGLSWVGDGPSYRYSGKRPVRSKPWPPFPEWLSRL 80 (194)
T ss_dssp -EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCCCCECCECCE-SSEEEEEECT--CCCTCC-EECCCEBSCCHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcCCCEEccceecceeeEEECCCCCeEcCCccccCCCCCCCccHHHHHH
Confidence 567775 999999999999999644443221110 0 00000 0 0 1221 12233332 334444
Q ss_pred HHHHhhhhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCCc-----eeEEEeccccccCcceEEcccccccccc
Q 016264 224 METYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE-----VTLNVCLGKQFTGGELFFRGTRCEKHVN 298 (392)
Q Consensus 224 l~~yl~Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~Se-----vTLNI~Ln~dFeGGgl~F~~~~c~~hv~ 298 (392)
++....-.. ..+. ..+| ...|-.|.++. .+++|.|+.+ .-+.|+||.. ....|....
T Consensus 81 ~~~~~~~~~--~~~~---~~~n--~~liN~Y~~g~--~i~~H~D~~~~~~~~~I~slSLG~~---~~~~f~~~~------ 142 (194)
T PF13532_consen 81 LERLVEATG--IPPG---WRPN--QCLINYYRDGS--GIGPHSDDEEYGFGPPIASLSLGSS---RVFRFRNKS------ 142 (194)
T ss_dssp HHHHHHHHT---SHS---S--S--EEEEEEESSTT---EEEE---TTC-CCSEEEEEEEES----EEEEEEECG------
T ss_pred HHHHHHHhc--cccC---CCCC--EEEEEecCCCC--CcCCCCCcccccCCCcEEEEEEccC---ceEEEeecc------
Confidence 432222110 1121 2223 45567898866 9999999874 3566666421 112333211
Q ss_pred CCCCccceeeecCCCceEEEecCC---CCcCCccCCcc---------ceeeEe
Q 016264 299 TGSQTEEIFDYSHVPGRAVLHRGR---HRHGARATTSG---------HRVNLL 339 (392)
Q Consensus 299 ~~~~~~e~~~y~~~~G~AllHpGr---h~HeglpVTsG---------~RynLV 339 (392)
..++.+.+....|..++..|. .+|+..++..+ .|.+|.
T Consensus 143 ---~~~~~~~~~L~~gsl~vm~g~~r~~~H~I~~~~~~~~~~~~~~~~RislT 192 (194)
T PF13532_consen 143 ---DDDEPIEVPLPPGSLLVMSGEARYDWHGIPPVKKDTHPSHYVRGRRISLT 192 (194)
T ss_dssp ---GTS-EEEEEE-TTEEEEEETTHHHHEEEE-S-SCEEEESTEE-S-EEEEE
T ss_pred ---CCCccEEEEcCCCCEEEeChHHhhheeEcccccCCccccccCCCCEEEEE
Confidence 124667788999999999999 44999999885 587775
No 20
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=95.53 E-value=0.047 Score=45.33 Aligned_cols=87 Identities=17% Similarity=0.134 Sum_probs=45.4
Q ss_pred eEEEEeCCCCCCCcccc-cCCceeEEEeccccccCcceEEcccccccccc-------CCCCccceeeecCCCceEEEecC
Q 016264 250 FVVEYGKDRDVDLGFHV-DDSEVTLNVCLGKQFTGGELFFRGTRCEKHVN-------TGSQTEEIFDYSHVPGRAVLHRG 321 (392)
Q Consensus 250 FVVrY~~~~d~~L~~H~-D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~-------~~~~~~e~~~y~~~~G~AllHpG 321 (392)
..+.|+++. ...+|. .+|.++-..+|.-+=+.|.+.|...+...... ..........+.++.|..||||+
T Consensus 3 W~ni~~~g~--~~~~H~H~~s~~SgVyYv~~p~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~G~lvlFPs 80 (101)
T PF13759_consen 3 WANIYRKGG--YNEPHNHPNSWLSGVYYVQVPEGSGPLRFHDPRGSFSFGAPFDNYDQNDLNSPYYIVEPEEGDLVLFPS 80 (101)
T ss_dssp EEEEE-TT----EEEE--TT-SEEEEEECE--TTS-SEEEE-TTCCCGTTS----TTTTCCC-SEEEE---TTEEEEEET
T ss_pred eEEEeCCCC--ccCceECCCcCEEEEEEEECCCCCCceeeeCCCccceecccccccccCcccCceEEeCCCCCEEEEeCC
Confidence 445666654 445554 46788999999644377888987543211000 01112445678999999999999
Q ss_pred CCCcCCccCCcc-ceeeE
Q 016264 322 RHRHGARATTSG-HRVNL 338 (392)
Q Consensus 322 rh~HeglpVTsG-~RynL 338 (392)
.+.|++.|-.+. .|+.+
T Consensus 81 ~l~H~v~p~~~~~~Risi 98 (101)
T PF13759_consen 81 WLWHGVPPNNSDEERISI 98 (101)
T ss_dssp TSEEEE----SSS-EEEE
T ss_pred CCEEeccCcCCCCCEEEE
Confidence 999999999986 56554
No 21
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.69 E-value=0.054 Score=51.40 Aligned_cols=84 Identities=27% Similarity=0.384 Sum_probs=59.0
Q ss_pred eeEEEEeCCCCCCCccccc---CCceeEEE--ec---cccccCcceEEccccccccccCCCCccceeeecCCCceEEEec
Q 016264 249 GFVVEYGKDRDVDLGFHVD---DSEVTLNV--CL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR 320 (392)
Q Consensus 249 ~FVVrY~~~~d~~L~~H~D---~SevTLNI--~L---n~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHp 320 (392)
....+|.++. .=..|.| +--|.|.| .| +.||+|||...-+.+.. +. ...-.+..++|.+++|.
T Consensus 126 pLlLqYgpgD--~NcLHQDLYGelvFPLQvailLsePg~DfTGGEF~lvEQRPR--~Q-----Sr~~vvpLrqG~g~vFa 196 (236)
T COG3826 126 PLLLQYGPGD--YNCLHQDLYGELVFPLQVAILLSEPGTDFTGGEFVLVEQRPR--MQ-----SRPTVVPLRQGDGVVFA 196 (236)
T ss_pred ceeEEecCCc--cchhhhhhhhceeeeeeEEEeccCCCCcccCceEEEEecccc--cc-----cCCceeeccCCceEEEE
Confidence 3578999976 6677888 22344443 34 47999999988776532 11 23344578999999984
Q ss_pred CC--------------CCcCCccCCccceeeEeee
Q 016264 321 GR--------------HRHGARATTSGHRVNLLLW 341 (392)
Q Consensus 321 Gr--------------h~HeglpVTsG~RynLV~W 341 (392)
-+ .+||.-.+-||+|+.+-+-
T Consensus 197 vr~RPv~gtrG~~r~~lRHGvS~lRSG~R~t~GiI 231 (236)
T COG3826 197 VRDRPVQGTRGWYRVPLRHGVSRLRSGERHTVGII 231 (236)
T ss_pred eecCcccCccCccccchhcchhhhhcccceeeEEE
Confidence 22 7999999999999988543
No 22
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=94.41 E-value=0.52 Score=45.27 Aligned_cols=158 Identities=20% Similarity=0.236 Sum_probs=87.5
Q ss_pred cccCCcEEEecCCCHHHHHHHHHHHHhhhh---hhhccccc---ccccCCC-----------Cccccc-c---cccChH-
Q 016264 160 SEPSPGVFTFEMLQPRFCELLLAEVENFEK---WVNEAKFR---IMRPNTM-----------NKYGAV-L---DDFGLE- 217 (392)
Q Consensus 160 ~ep~P~Vy~fpvftpefC~~LIeE~E~fg~---Ws~gs~~~---i~rPn~m-----------N~Ygvv-L---ddiGl~- 217 (392)
++..||++.+|=|..+.+++|++++++... |-. -..+ .|.+..+ +.|.-- . +-....
T Consensus 14 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~-~~~~gg~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~ 92 (213)
T PRK15401 14 EPLAPGAVLLRGFALAAAEALLAAIEAVAAQAPFRH-MVTPGGYTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPA 92 (213)
T ss_pred eecCCCcEEeCCCCHHHHHHHHHHHHHHHhcCCccc-eecCCCCcceeEEeccccceEecCCCCcccCCcCCCCCCCCCC
Confidence 456799999998899999999999987321 211 0000 0111101 122211 1 111111
Q ss_pred --HHHHHHHHHHhhhhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCCc-----eeEEEeccccccCcceEEcc
Q 016264 218 --TMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE-----VTLNVCLGKQFTGGELFFRG 290 (392)
Q Consensus 218 --~~~~~Ll~~yl~Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~Se-----vTLNI~Ln~dFeGGgl~F~~ 290 (392)
..+..|.+.... . .++....+| -..|-.|.++. .+++|.|+.| .-++|+||. ...|.=
T Consensus 93 ~P~~l~~L~~~~~~----~--~~~~~~~p~--a~LvN~Y~~G~--~mg~H~D~~E~~~~~pI~SvSLG~-----~~~F~~ 157 (213)
T PRK15401 93 MPASFLALAQRAAA----A--AGFPGFQPD--ACLINRYAPGA--KLSLHQDKDERDFRAPIVSVSLGL-----PAVFQF 157 (213)
T ss_pred chHHHHHHHHHHHH----H--cCCCCCCCC--EEEEEeccCcC--ccccccCCCcccCCCCEEEEeCCC-----CeEEEe
Confidence 133444432211 0 111111223 46677899885 9999999644 346677753 333331
Q ss_pred ccccccccCCCCccceeeecCCCceEEEecCC---CCcCCccCCcc-------ceeeEee
Q 016264 291 TRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---HRHGARATTSG-------HRVNLLL 340 (392)
Q Consensus 291 ~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---h~HeglpVTsG-------~RynLV~ 340 (392)
..-. ..+....+....|..||..|. .+|+..++..| .|+||-.
T Consensus 158 ~~~~-------~~~~~~~l~L~~Gdllvm~G~sr~~~HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 158 GGLK-------RSDPLQRILLEHGDVVVWGGPSRLRYHGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred cccC-------CCCceEEEEeCCCCEEEECchHhheeccCCcCCCCcCCCCCCCeEEEEe
Confidence 0000 112234667899999999988 88999988765 5888853
No 23
>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae.
Probab=92.57 E-value=0.25 Score=50.43 Aligned_cols=81 Identities=20% Similarity=0.226 Sum_probs=63.8
Q ss_pred CCcccceeEEEEeCCCCCCCcccccC--------CceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCc
Q 016264 243 TLDSHHGFVVEYGKDRDVDLGFHVDD--------SEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPG 314 (392)
Q Consensus 243 ~Ldsh~~FVVrY~~~~d~~L~~H~D~--------SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G 314 (392)
.++.+..| ++|..+. .|.-|.|. .+++|.++|+..=+||++.|.=..+.. .+ ...+
T Consensus 76 ~V~n~iTf-ikY~kGd--~f~~~~d~~~~~~~n~~~y~LvLyL~~~~~GGktkiyi~~~~~---------tv----I~~~ 139 (339)
T PF03336_consen 76 IVDNTITF-IKYEKGD--FFDNHRDFIKRDSKNCLEYHLVLYLNNPENGGKTKIYIDPNDN---------TV----ISTS 139 (339)
T ss_pred EEcceEEE-EEEccCc--chhhhcccceeccCCceEEEEEEEEeccCCCceEEEEECCCCc---------ee----eecc
Confidence 44667776 8898766 89999874 358999999999999999988433221 11 2558
Q ss_pred eEEEecCCCCcCCccCCccceeeEe
Q 016264 315 RAVLHRGRHRHGARATTSGHRVNLL 339 (392)
Q Consensus 315 ~AllHpGrh~HeglpVTsG~RynLV 339 (392)
.-+||.-+..|+...|++|++++++
T Consensus 140 ~DvLFdKsl~h~s~~V~~G~K~VAl 164 (339)
T PF03336_consen 140 EDVLFDKSLNHESIIVEEGRKIVAL 164 (339)
T ss_pred ccEEEeccccccceEeccCeEEEEE
Confidence 8899999999999999999999954
No 24
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=88.35 E-value=1 Score=44.05 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=54.5
Q ss_pred CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCC------------CcC
Q 016264 259 DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRH------------RHG 326 (392)
Q Consensus 259 d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh------------~He 326 (392)
+..+++|+|.+.+||... ++ .|||.... ..+++.+.+.+|..||.-|.+ +|.
T Consensus 132 ~~g~~~HtD~g~lTlL~q--d~--v~GLqV~~------------~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HR 195 (262)
T PLN03001 132 TLGLQSHSDFGAITLLIQ--DD--VEGLQLLK------------DAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHR 195 (262)
T ss_pred ccCCcCCcCCCeeEEEEe--CC--CCceEEee------------CCeEEECCCCCCcEEEEccHHHHHHhCCccccccce
Confidence 456889999999999654 33 35676542 136788899999999999874 498
Q ss_pred CccCCccceeeEeeechhh
Q 016264 327 ARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 327 glpVTsG~RynLV~W~rss 345 (392)
+.......||.+..|+...
T Consensus 196 Vv~~~~~~R~Sia~F~~p~ 214 (262)
T PLN03001 196 AIANANKARLSVATFHDPA 214 (262)
T ss_pred EEcCCCCCEEEEEEEEcCC
Confidence 8765567799999999854
No 25
>PLN02276 gibberellin 20-oxidase
Probab=88.21 E-value=1.4 Score=44.86 Aligned_cols=78 Identities=19% Similarity=0.184 Sum_probs=59.4
Q ss_pred EEEEeC----CCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGK----DRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~----~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+ +....+++|+|-+.+||... + +.|||.... ..+++.+.+.+|..||.-|.
T Consensus 210 l~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q---d-~v~GLQV~~------------~g~Wi~V~p~pgalVVNiGD~L~~ 273 (361)
T PLN02276 210 CNYYPPCQEPELTLGTGPHCDPTSLTILHQ---D-QVGGLQVFV------------DNKWRSVRPRPGALVVNIGDTFMA 273 (361)
T ss_pred eEeCCCCCCcccccCCccccCCceeEEEEe---c-CCCceEEEE------------CCEEEEcCCCCCeEEEEcHHHHHH
Confidence 345644 23456889999999999874 2 456777652 14678899999999999975
Q ss_pred --------CCcCCccCCccceeeEeeechh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRS 344 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rs 344 (392)
.+|.+..-....||.++.|+.-
T Consensus 274 ~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P 303 (361)
T PLN02276 274 LSNGRYKSCLHRAVVNSERERRSLAFFLCP 303 (361)
T ss_pred HhCCccccccceeecCCCCCEEEEEEEecC
Confidence 6788876667789999999984
No 26
>PLN02904 oxidoreductase
Probab=87.67 E-value=1.6 Score=44.63 Aligned_cols=79 Identities=13% Similarity=0.083 Sum_probs=59.2
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+- .+..+++|+|-+.+||... + +|||..... ..+++.+.+.+|..||.-|.
T Consensus 212 l~~YPp~p~~~~~~g~~~HtD~g~lTlL~q---d--~~GLQV~~~-----------~g~Wi~V~p~pgalVVNiGD~Le~ 275 (357)
T PLN02904 212 VNCYPACPEPEIALGMPPHSDFGSLTILLQ---S--SQGLQIMDC-----------NKNWVCVPYIEGALIVQLGDQVEV 275 (357)
T ss_pred eeecCCCCCcccccCCcCccCCCceEEEec---C--CCeeeEEeC-----------CCCEEECCCCCCeEEEEccHHHHH
Confidence 4567542 3456789999999999864 2 357876531 13678889999999999985
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+..-....||.+..|+.-+
T Consensus 276 ~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~ 306 (357)
T PLN02904 276 MSNGIYKSVVHRVTVNKDYKRLSFASLHSLP 306 (357)
T ss_pred HhCCeeeccCCcccCCCCCCEEEEEEeecCC
Confidence 67988755667899999998654
No 27
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=86.70 E-value=1.7 Score=43.05 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=54.2
Q ss_pred CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC------------CCc
Q 016264 258 RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR------------HRH 325 (392)
Q Consensus 258 ~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr------------h~H 325 (392)
.+..+++|+|.+.+||... ++ +.|||..... ...+++.+.+.+|..||.-|. .+|
T Consensus 164 ~~~g~~~HtD~g~lTlL~q--d~-~~~GLqV~~~----------~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~H 230 (300)
T PLN02365 164 GSSGVQIHTDSGFLTILQD--DE-NVGGLEVMDP----------SSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKH 230 (300)
T ss_pred ccccccCccCCCceEEEec--CC-CcCceEEEEC----------CCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccc
Confidence 3456889999999998754 21 2467776531 014688899999999999886 578
Q ss_pred CCccCCccceeeEeeech
Q 016264 326 GARATTSGHRVNLLLWCR 343 (392)
Q Consensus 326 eglpVTsG~RynLV~W~r 343 (392)
.+..-....||.+..|+.
T Consensus 231 RVv~~~~~~R~Si~~F~~ 248 (300)
T PLN02365 231 RVQCKEATMRISIASFLL 248 (300)
T ss_pred eeEcCCCCCEEEEEEEec
Confidence 887555567999999975
No 28
>PLN02947 oxidoreductase
Probab=86.54 E-value=2.1 Score=44.00 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=55.1
Q ss_pred CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC------------CCcC
Q 016264 259 DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR------------HRHG 326 (392)
Q Consensus 259 d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr------------h~He 326 (392)
...+++|+|-+.+||... + +.|||.... ..+++.+.+.+|..||.-|. .+|.
T Consensus 241 ~~G~~~HTD~g~lTlL~Q--d--~v~GLQV~~------------~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HR 304 (374)
T PLN02947 241 TLGMPPHSDYGFLTLLLQ--D--EVEGLQIMH------------AGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHR 304 (374)
T ss_pred ccCCCCccCCCceEEEEe--c--CCCCeeEeE------------CCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccc
Confidence 346889999999999875 2 246777642 14688899999999999997 5688
Q ss_pred CccCCccceeeEeeechhh
Q 016264 327 ARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 327 glpVTsG~RynLV~W~rss 345 (392)
+..-..+.||.+..|+.-+
T Consensus 305 Vv~~~~~~R~Sia~F~~P~ 323 (374)
T PLN02947 305 VRVNSTKPRISVASLHSLP 323 (374)
T ss_pred cccCCCCCEEEEEEEecCC
Confidence 8655567899999999854
No 29
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=85.40 E-value=2.4 Score=43.10 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=58.9
Q ss_pred EEEEeC----CCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGK----DRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~----~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+ +.+..+++|+|-+.+||...=+ ..|||.... ..+++.+.+.+|..||.-|.
T Consensus 207 l~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~---~v~GLQV~~------------~g~Wi~V~p~pg~lVVNiGD~Le~ 271 (348)
T PLN00417 207 FNMYPPCPRPDKVIGVKPHADGSAFTLLLPDK---DVEGLQFLK------------DGKWYKAPIVPDTILINVGDQMEI 271 (348)
T ss_pred eeecCCCCCcccccCCcCccCCCceEEEEecC---CCCceeEeE------------CCeEEECCCCCCcEEEEcChHHHH
Confidence 356644 2345688999999999875421 236677642 13678899999999999887
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+..-..+.||.+..|+.-+
T Consensus 272 ~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~ 302 (348)
T PLN00417 272 MSNGIYKSPVHRVVTNREKERISVATFCIPG 302 (348)
T ss_pred HhCCeecccceEEecCCCCCEEEEEEEecCC
Confidence 56888766677899999999854
No 30
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=85.39 E-value=2.7 Score=42.76 Aligned_cols=79 Identities=16% Similarity=0.208 Sum_probs=58.5
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCC---
Q 016264 251 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRH--- 323 (392)
Q Consensus 251 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh--- 323 (392)
+.+|-+- ....+++|+|-+.+||... ++ .|||.... ..+++.+.+.+|..||.-|.+
T Consensus 204 l~~YPp~~~~~~~~g~~aHTD~g~lTlL~Q--d~--v~GLQV~~------------~g~Wv~V~p~pgalVVNiGD~Le~ 267 (341)
T PLN02984 204 VYRYPQCSNEAEAPGMEVHTDSSVISILNQ--DE--VGGLEVMK------------DGEWFNVKPIANTLVVNLGDMMQV 267 (341)
T ss_pred EEeCCCCCCcccccCccCccCCCceEEEEe--CC--CCCeeEee------------CCceEECCCCCCeEEEECChhhhh
Confidence 4667552 2446889999999999875 22 36676541 146888999999999999974
Q ss_pred ---------CcCCc-cCCccceeeEeeechhh
Q 016264 324 ---------RHGAR-ATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 324 ---------~Hegl-pVTsG~RynLV~W~rss 345 (392)
.|.+. +-....||.++.|+...
T Consensus 268 wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~ 299 (341)
T PLN02984 268 ISDDEYKSVLHRVGKRNKKKERYSICYFVFPE 299 (341)
T ss_pred hcCCeeeCCCCccccCCCCCCeEEEEEEecCC
Confidence 49994 44456799999999865
No 31
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=85.31 E-value=2.5 Score=42.84 Aligned_cols=80 Identities=14% Similarity=0.213 Sum_probs=59.4
Q ss_pred EEEEeCCC------CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC--
Q 016264 251 VVEYGKDR------DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR-- 322 (392)
Q Consensus 251 VVrY~~~~------d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr-- 322 (392)
+.+|-+-. +..+++|+|-+.+||... + +.|||.... +..+++.+.+.+|..||.-|.
T Consensus 182 l~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Q--d--~v~GLQV~~-----------~~g~Wi~Vpp~pga~VVNiGD~l 246 (335)
T PLN02156 182 MNHYPEKEETPEKVEIGFGEHTDPQLISLLRS--N--DTAGLQICV-----------KDGTWVDVPPDHSSFFVLVGDTL 246 (335)
T ss_pred EEeCCCCCCCccccccCCCCccCCCceEEEEe--C--CCCceEEEe-----------CCCCEEEccCCCCcEEEEhHHHH
Confidence 46675521 245788999999999865 2 346777642 124688899999999999986
Q ss_pred ----------CCcCCccCCccceeeEeeechhh
Q 016264 323 ----------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 ----------h~HeglpVTsG~RynLV~W~rss 345 (392)
..|.+..-....||.+..|+.-.
T Consensus 247 ~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~ 279 (335)
T PLN02156 247 QVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPP 279 (335)
T ss_pred HHHhCCeeeccceeeecCCCCCEEEEEEeecCC
Confidence 67888766667799999999844
No 32
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=84.72 E-value=3.7 Score=40.51 Aligned_cols=90 Identities=18% Similarity=0.209 Sum_probs=66.0
Q ss_pred ceeEEEEeCCCCCCCcccccC-----CceeEEEecccc----ccCcceEEccccccccccCCCCccceeeecCCCceEEE
Q 016264 248 HGFVVEYGKDRDVDLGFHVDD-----SEVTLNVCLGKQ----FTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVL 318 (392)
Q Consensus 248 ~~FVVrY~~~~d~~L~~H~D~-----SevTLNI~Ln~d----FeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~All 318 (392)
.+.|.+|- +.+...-.|+|+ -.+|---+||+. -.||.|+..-... ....+..|.-+..|+
T Consensus 144 kAMVAcYP-GNGtgYVrHVDNP~gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~----------~~~adieP~fdrLlf 212 (280)
T KOG3710|consen 144 KAMVACYP-GNGTGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGILRIFPEGS----------TTFADIEPKFDRLLF 212 (280)
T ss_pred eEEEEEec-CCCceeeEeccCCCCCceEEEEEEEcccCcceeeccceeEeccCCC----------CcccccCcCCCeEEE
Confidence 56788994 555666678775 358999999863 4688887654321 123456899999999
Q ss_pred ecCC--CCcCCccCCccceeeEeeechhhhHHH
Q 016264 319 HRGR--HRHGARATTSGHRVNLLLWCRSSVFRE 349 (392)
Q Consensus 319 HpGr--h~HeglpVTsG~RynLV~W~rss~~R~ 349 (392)
|-.. .-||.+|... +||.+.+|...-.-|+
T Consensus 213 fwSdrrnPhev~Pa~~-tryaitvwyfda~era 244 (280)
T KOG3710|consen 213 FWSDRRNPHEVQPAYA-TRYAITVWYFDAKERA 244 (280)
T ss_pred EEecCCCccccccccc-cceEEEEEEeccccch
Confidence 9887 5599999987 5899999998665554
No 33
>COG3751 EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=84.64 E-value=3 Score=41.28 Aligned_cols=88 Identities=22% Similarity=0.296 Sum_probs=67.8
Q ss_pred EEEEeCCCCCCCcccccCC------ceeEEEecc---ccccCcce-EEccccccccccCCCCccceeeecCCCceEEEec
Q 016264 251 VVEYGKDRDVDLGFHVDDS------EVTLNVCLG---KQFTGGEL-FFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR 320 (392)
Q Consensus 251 VVrY~~~~d~~L~~H~D~S------evTLNI~Ln---~dFeGGgl-~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHp 320 (392)
+..|.++- .+..|-|+. .+|...+++ +.+-||+| .|...... .+.++...+..|.=+..++|-
T Consensus 140 ~~~y~~G~--~l~~H~D~~~~~~~R~~~yv~y~~r~wkpe~GGeL~l~~s~~~~-----~~~~~~~~ti~P~fn~lv~F~ 212 (252)
T COG3751 140 ITVYNPGC--FLLKHDDNGRDKDIRLATYVYYLTREWKPEYGGELRLFHSLQKN-----NTAADSFKTIAPVFNSLVFFK 212 (252)
T ss_pred eeEecCCc--eeEeecccCCCccceEEEEEeccCCCCCcCCCCceeeccccccc-----ccccccccccCCCCceEEEEE
Confidence 45677765 899998865 478888887 57999999 77654211 234566777889999999999
Q ss_pred CCCCcCCccCCc----cceeeEeeechhh
Q 016264 321 GRHRHGARATTS----GHRVNLLLWCRSS 345 (392)
Q Consensus 321 Grh~HeglpVTs----G~RynLV~W~rss 345 (392)
-+-.|+..+|-. +.|..+-+|.+..
T Consensus 213 s~~~Hs~h~V~~~~~~~~RlsV~GW~r~~ 241 (252)
T COG3751 213 SRPSHSVHSVEEPYAAADRLSVTGWFRRP 241 (252)
T ss_pred ecCCccceeccccccccceEEEeeEEecC
Confidence 998888887765 8899999999864
No 34
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=84.64 E-value=2.4 Score=42.89 Aligned_cols=82 Identities=16% Similarity=0.210 Sum_probs=60.9
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+- .+..+++|+|-+.+||... + +.|||..... +..+++.+.+.+|..||.-|.
T Consensus 197 ~~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d--~v~GLQV~~~----------~~g~Wi~V~p~pg~~vVNiGD~L~~ 262 (345)
T PLN02750 197 FNHYPPCPAPHLALGVGRHKDGGALTVLAQ--D--DVGGLQISRR----------SDGEWIPVKPIPDAFIINIGNCMQV 262 (345)
T ss_pred EEecCCCCCcccccCcCCCCCCCeEEEEec--C--CCCceEEeec----------CCCeEEEccCCCCeEEEEhHHHHHH
Confidence 3567542 3456889999999999654 2 3467876421 124688899999999999886
Q ss_pred --------CCcCCccCCccceeeEeeechhhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSSV 346 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss~ 346 (392)
.+|.+.......||.++.|+....
T Consensus 263 ~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~ 294 (345)
T PLN02750 263 WTNDLYWSAEHRVVVNSQKERFSIPFFFFPSH 294 (345)
T ss_pred HhCCeeecccceeccCCCCCEEEEEEeecCCC
Confidence 678888666678999999998763
No 35
>PLN02216 protein SRG1
Probab=84.44 E-value=2.6 Score=42.97 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=58.5
Q ss_pred EEEeC----CCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCC----
Q 016264 252 VEYGK----DRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRH---- 323 (392)
Q Consensus 252 VrY~~----~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh---- 323 (392)
.+|-+ +....+++|+|-+.+||...-++ -|||.... ..+++.+.+.+|..||.-|.+
T Consensus 215 ~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~---v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~L~~~ 279 (357)
T PLN02216 215 NYYPPCPQPDQVIGLTPHSDAVGLTILLQVNE---VEGLQIKK------------DGKWVSVKPLPNALVVNVGDILEII 279 (357)
T ss_pred eecCCCCCcccccCccCcccCceEEEEEecCC---CCceeEEE------------CCEEEECCCCCCeEEEEcchhhHhh
Confidence 55644 23446889999999998764322 35676542 146888999999999999973
Q ss_pred --------CcCCccCCccceeeEeeechhh
Q 016264 324 --------RHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 324 --------~HeglpVTsG~RynLV~W~rss 345 (392)
.|.+..-..+.||.++.|+..+
T Consensus 280 TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~ 309 (357)
T PLN02216 280 TNGTYRSIEHRGVVNSEKERLSVATFHNTG 309 (357)
T ss_pred cCCeeeccCceeecCCCCCEEEEEEEecCC
Confidence 4888766677899999999865
No 36
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=83.81 E-value=2.9 Score=42.56 Aligned_cols=72 Identities=18% Similarity=0.205 Sum_probs=55.1
Q ss_pred CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC------------CCc
Q 016264 258 RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR------------HRH 325 (392)
Q Consensus 258 ~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr------------h~H 325 (392)
.+..+++|+|-+.+||... + ..|||.... ..+++.+.+.+|..||.-|. .+|
T Consensus 226 ~~~g~~~HTD~g~lTlL~q--d--~v~GLQV~~------------~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~H 289 (360)
T PLN03178 226 LALGVEAHTDVSALTFILH--N--MVPGLQVLY------------EGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILH 289 (360)
T ss_pred cccCcCCccCCCceEEEee--C--CCCceeEeE------------CCEEEEcCCCCCeEEEEccHHHHHHhCCccccccc
Confidence 3456889999999999854 2 256777652 13678889999999999986 578
Q ss_pred CCccCCccceeeEeeechhh
Q 016264 326 GARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 326 eglpVTsG~RynLV~W~rss 345 (392)
.+..-..+.||.++.|+.-.
T Consensus 290 RVv~~~~~~R~Si~~F~~P~ 309 (360)
T PLN03178 290 RGLVNKEKVRISWAVFCEPP 309 (360)
T ss_pred eeecCCCCCeEEEEEEecCC
Confidence 87544456799999999965
No 37
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=83.70 E-value=3.6 Score=41.80 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=59.2
Q ss_pred EEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC-----
Q 016264 252 VEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR----- 322 (392)
Q Consensus 252 VrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr----- 322 (392)
.+|-+- .+..+++|+|-+.+||... + +.|||.... ..+++.+.+.+|..||.-|.
T Consensus 202 ~~YPp~~~~~~~~G~~~HtD~g~lTlL~Q--d--~v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~L~~~ 265 (348)
T PLN02912 202 NYYPPCPQPELTYGLPGHKDANLITVLLQ--D--EVSGLQVFK------------DGKWIAVNPIPNTFIVNLGDQMQVI 265 (348)
T ss_pred eecCCCCChhhcCCcCCCcCCCceEEEEE--C--CCCceEEEE------------CCcEEECCCcCCeEEEEcCHHHHHH
Confidence 556552 2446889999999999865 2 246777752 13678889999999999887
Q ss_pred -------CCcCCccCCccceeeEeeechhh
Q 016264 323 -------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 -------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+.....+.||.+..|+.-.
T Consensus 266 TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~ 295 (348)
T PLN02912 266 SNDKYKSVLHRAVVNTDKERISIPTFYCPS 295 (348)
T ss_pred hCCEEEcccccccCCCCCCEEEEEEEecCC
Confidence 57888765667899999999854
No 38
>PTZ00273 oxidase reductase; Provisional
Probab=82.45 E-value=3 Score=41.55 Aligned_cols=79 Identities=23% Similarity=0.279 Sum_probs=58.0
Q ss_pred EEEEeCC-----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC---
Q 016264 251 VVEYGKD-----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--- 322 (392)
Q Consensus 251 VVrY~~~-----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr--- 322 (392)
+.+|-+. .+..+++|+|-+.+||... + ..|||..... ..+++.+.+.+|..||.-|.
T Consensus 181 l~~YP~~~~~~~~~~g~~~HTD~g~lTlL~q--d--~~~GLqV~~~-----------~g~Wi~V~p~pg~lvVNvGD~l~ 245 (320)
T PTZ00273 181 MKHYPALPQTKKGRTVCGEHTDYGIITLLYQ--D--SVGGLQVRNL-----------SGEWMDVPPLEGSFVVNIGDMME 245 (320)
T ss_pred eeecCCCCCccccCcccccccCCCeEEEEec--C--CCCceEEECC-----------CCCEEeCCCCCCeEEEEHHHHHH
Confidence 4567552 2345789999999999864 2 2467776531 24578889999999999884
Q ss_pred ---------CCcCCccCCccceeeEeeechhh
Q 016264 323 ---------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 ---------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+.. ....||.++.|+.-+
T Consensus 246 ~~TnG~~kSt~HRVv~-~~~~R~Si~~F~~p~ 276 (320)
T PTZ00273 246 MWSNGRYRSTPHRVVN-TGVERYSMPFFCEPN 276 (320)
T ss_pred HHHCCeeeCCCccccC-CCCCeEEEEEEEcCC
Confidence 6798863 356799999999966
No 39
>PLN02485 oxidoreductase
Probab=82.44 E-value=1.9 Score=43.20 Aligned_cols=74 Identities=22% Similarity=0.217 Sum_probs=55.5
Q ss_pred CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC------------CCcC
Q 016264 259 DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR------------HRHG 326 (392)
Q Consensus 259 d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr------------h~He 326 (392)
+..+++|+|-+.+||... ++ +-|||..... ..+++.+.+.+|..||.-|. .+|.
T Consensus 204 ~~g~~~HTD~g~lTlL~q--d~-~~~GLqV~~~-----------~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HR 269 (329)
T PLN02485 204 DIGCGAHTDYGLLTLVNQ--DD-DITALQVRNL-----------SGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHR 269 (329)
T ss_pred CcccccccCCCeEEEEec--cC-CCCeeeEEcC-----------CCcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCce
Confidence 446889999999999543 11 2367776531 24678889999999999885 4599
Q ss_pred CccCCccceeeEeeechhhh
Q 016264 327 ARATTSGHRVNLLLWCRSSV 346 (392)
Q Consensus 327 glpVTsG~RynLV~W~rss~ 346 (392)
+..-....||.++.|+....
T Consensus 270 Vv~~~~~~R~Si~~F~~p~~ 289 (329)
T PLN02485 270 VINNSPKYRVCVAFFYETNF 289 (329)
T ss_pred ecCCCCCCeEEEEEEecCCC
Confidence 98666667999999998653
No 40
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=82.21 E-value=3.2 Score=42.46 Aligned_cols=82 Identities=22% Similarity=0.231 Sum_probs=60.0
Q ss_pred EEEEeC----CCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGK----DRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~----~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+ +.+..++.|+|.+.+||... + +.|||...... .++++.+.+.+|..||.-|.
T Consensus 199 l~~YP~~~~~~~~~G~~~HTD~g~lTlL~Q--d--~v~GLQV~~~~----------~~~Wi~Vpp~pgalVVNiGD~L~~ 264 (358)
T PLN02515 199 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ--D--QVGGLQATRDG----------GKTWITVQPVEGAFVVNLGDHGHY 264 (358)
T ss_pred EeecCCCCChhhccCCCCCCCCCeEEEEec--C--CCCceEEEECC----------CCeEEECCCCCCeEEEEccHHHHH
Confidence 345654 23446889999999999865 2 24678764311 13588899999999999986
Q ss_pred --------CCcCCccCCccceeeEeeechhhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSSV 346 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss~ 346 (392)
.+|.+..-..+.||.++.|+.-+.
T Consensus 265 ~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~ 296 (358)
T PLN02515 265 LSNGRFKNADHQAVVNSNCSRLSIATFQNPAP 296 (358)
T ss_pred HhCCeeeeecceEECCCCCCEEEEEEEecCCC
Confidence 578876666778999999998653
No 41
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=81.71 E-value=5.4 Score=36.91 Aligned_cols=65 Identities=25% Similarity=0.290 Sum_probs=41.3
Q ss_pred ceeEEEEeCCCCCCCcccccCCce-----eEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC
Q 016264 248 HGFVVEYGKDRDVDLGFHVDDSEV-----TLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR 322 (392)
Q Consensus 248 ~~FVVrY~~~~d~~L~~H~D~Sev-----TLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr 322 (392)
...|-.|.++ ..+++|.|.++. -+.|+||.. +.|.= +.. ...+....+....|..||-.|.
T Consensus 96 ~~LvN~Y~~G--d~mg~H~D~~e~~~~~pI~SvSLG~~-----r~F~~-~~~------~~~~~~~~l~L~sGsllvM~G~ 161 (169)
T TIGR00568 96 ACLVNRYAPG--ATLSLHQDRDEPDLRAPLLSVSLGLP-----AIFLI-GGL------KRNDPPKRLRLHSGDVVIMGGE 161 (169)
T ss_pred EEEEEeecCC--CccccccccccccCCCCEEEEeCCCC-----EEEEe-cCC------cCCCceEEEEeCCCCEEEECCc
Confidence 4567789988 489999998765 366777642 22321 100 0112345667899999999888
Q ss_pred ---CCcC
Q 016264 323 ---HRHG 326 (392)
Q Consensus 323 ---h~He 326 (392)
.+||
T Consensus 162 sR~~~Hg 168 (169)
T TIGR00568 162 SRLAFHG 168 (169)
T ss_pred hhccccC
Confidence 5554
No 42
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=81.18 E-value=3.3 Score=42.40 Aligned_cols=80 Identities=23% Similarity=0.267 Sum_probs=59.1
Q ss_pred EEEEeC----CCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGK----DRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~----~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+ +....+++|+|-+.+||... ++ .|||..... ..+++.+.+.+|..||.-|.
T Consensus 214 l~~YPp~p~~~~~~G~~~HtD~g~lTiL~Q--d~--v~GLQV~~~-----------~~~Wi~V~p~pgalVVNiGD~lq~ 278 (358)
T PLN02254 214 LNSYPVCPDPDRAMGLAPHTDSSLLTILYQ--SN--TSGLQVFRE-----------GVGWVTVPPVPGSLVVNVGDLLHI 278 (358)
T ss_pred EecCCCCCCcccccCcCCccCCCcEEEEec--CC--CCCceEECC-----------CCEEEEcccCCCCEEEEhHHHHHH
Confidence 456755 23456899999999999875 32 366776421 13688899999999999985
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+..-....||.+..|+.-.
T Consensus 279 ~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~ 309 (358)
T PLN02254 279 LSNGRFPSVLHRAVVNKTRHRISVAYFYGPP 309 (358)
T ss_pred HhCCeeccccceeecCCCCCEEEEEEEecCC
Confidence 67888654556799999999843
No 43
>PLN02704 flavonol synthase
Probab=80.85 E-value=4.5 Score=40.81 Aligned_cols=71 Identities=20% Similarity=0.252 Sum_probs=54.7
Q ss_pred CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC------------CCcC
Q 016264 259 DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR------------HRHG 326 (392)
Q Consensus 259 d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr------------h~He 326 (392)
+-.++.|+|-+.+||... ++ .|||.... ..+++.+.+.+|..||.-|. -+|.
T Consensus 215 ~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~------------~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HR 278 (335)
T PLN02704 215 ALGVVAHTDMSAITILVP--NE--VQGLQVFR------------DDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHR 278 (335)
T ss_pred ccCccCccCCcceEEEec--CC--CCceeEeE------------CCEEEeCCCCCCeEEEEechHHHHHhCCeeecccce
Confidence 346889999999999875 33 55777642 13678889999999999997 5788
Q ss_pred CccCCccceeeEeeechhh
Q 016264 327 ARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 327 glpVTsG~RynLV~W~rss 345 (392)
+..--...||.++.|+.-.
T Consensus 279 Vv~~~~~~R~Si~~F~~p~ 297 (335)
T PLN02704 279 TTVNKEKTRMSWPVFLEPP 297 (335)
T ss_pred eecCCCCCeEEEEEEecCC
Confidence 8654456799999999865
No 44
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=80.82 E-value=4.6 Score=40.62 Aligned_cols=80 Identities=20% Similarity=0.171 Sum_probs=57.7
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+- ....+++|+|.+.+||...= + +.|||.... ..+++.+.+.+|..||.-|.
T Consensus 162 l~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd--~-~v~GLQV~~------------~g~Wi~V~p~pg~lvVNiGD~l~~ 226 (321)
T PLN02299 162 VSNYPPCPKPDLVKGLRAHTDAGGIILLFQD--D-KVSGLQLLK------------DGEWVDVPPMRHSIVVNLGDQLEV 226 (321)
T ss_pred eEecCCCCCcccccCccCccCCCeEEEEEec--C-CCCCcCccc------------CCeEEECCCCCCeEEEEeCHHHHH
Confidence 4667552 23357799999999997532 1 235565431 14678889999999999986
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+..-..+.||.+..|+.-+
T Consensus 227 ~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~ 257 (321)
T PLN02299 227 ITNGKYKSVMHRVVAQTDGNRMSIASFYNPG 257 (321)
T ss_pred HhCCceecccceeecCCCCCEEEEEEEecCC
Confidence 56888755577899999999854
No 45
>PF10014 2OG-Fe_Oxy_2: 2OG-Fe dioxygenase; InterPro: IPR018724 Members of this family of hypothetical bacterial proteins have no known function. Some are described as putative biofilm formation or putative agglutination proteins. ; PDB: 3PL0_B.
Probab=80.64 E-value=2.2 Score=40.05 Aligned_cols=82 Identities=21% Similarity=0.190 Sum_probs=50.8
Q ss_pred EEEEeCCCCC-----CCcccccCCceeEEEecc-ccccCcceEEccccccccccCCCCccceeeecCCCceEEEec-CCC
Q 016264 251 VVEYGKDRDV-----DLGFHVDDSEVTLNVCLG-KQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR-GRH 323 (392)
Q Consensus 251 VVrY~~~~d~-----~L~~H~D~SevTLNI~Ln-~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHp-Grh 323 (392)
-+|+.+..+. -=+.|.|..++++..+++ ..-+||++......-.+ -...--..+|.+++.- .+.
T Consensus 100 q~Ri~a~~~~~g~ptPEGiH~DG~d~v~~~li~r~Ni~GG~s~i~~~~~~~---------~~~~~l~~p~d~l~~~D~~~ 170 (195)
T PF10014_consen 100 QIRIIATPDEPGEPTPEGIHRDGVDFVFIHLINRHNIEGGESQIYDNDKEI---------LFFFTLLEPGDTLLVDDRRV 170 (195)
T ss_dssp EEEEETTTS--B--STTSSB--SSSEEEEEEEEEESEEE--EEEEETTSSE---------EEEE---STTEEEEEETTTE
T ss_pred EEEEEEecCccCCcCCCCccCCCCCEEEEEEEcCCCccCceEEEEeCCCCc---------ceEEEecCCCCEEEEeCCcc
Confidence 4666664333 357999999999999887 46799999986432211 1122245889998888 669
Q ss_pred CcCCccCCc------cceeeEeee
Q 016264 324 RHGARATTS------GHRVNLLLW 341 (392)
Q Consensus 324 ~HeglpVTs------G~RynLV~W 341 (392)
+|++.||+. |.|-+||+-
T Consensus 171 ~H~vtpI~~~~~~~~g~RDvlvit 194 (195)
T PF10014_consen 171 WHYVTPIRPVDPSRPGYRDVLVIT 194 (195)
T ss_dssp EEEE--EEES-TT---EEEEEEEE
T ss_pred eECCCceecCCCCCcEEEEEEEEe
Confidence 999999974 888888863
No 46
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=77.89 E-value=7.5 Score=38.89 Aligned_cols=81 Identities=16% Similarity=0.133 Sum_probs=57.8
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCc-eEEEecCC---
Q 016264 251 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPG-RAVLHRGR--- 322 (392)
Q Consensus 251 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G-~AllHpGr--- 322 (392)
+.+|.+- ....+++|+|-+.+||...-+ .-|||.... ..+++.+.+.+| ..||.-|.
T Consensus 157 l~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~---~v~GLqV~~------------~g~Wi~V~p~p~~~lvVNvGD~L~ 221 (303)
T PLN02403 157 VAKYPECPRPELVRGLREHTDAGGIILLLQDD---QVPGLEFLK------------DGKWVPIPPSKNNTIFVNTGDQLE 221 (303)
T ss_pred eEcCCCCCCcccccCccCccCCCeEEEEEecC---CCCceEecc------------CCeEEECCCCCCCEEEEEehHHHH
Confidence 5677553 223578999999999876432 135676531 145778888984 77888776
Q ss_pred ---------CCcCCccCCccceeeEeeechhhh
Q 016264 323 ---------HRHGARATTSGHRVNLLLWCRSSV 346 (392)
Q Consensus 323 ---------h~HeglpVTsG~RynLV~W~rss~ 346 (392)
.+|.+.....+.||.+..|+....
T Consensus 222 ~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~ 254 (303)
T PLN02403 222 VLSNGRYKSTLHRVMADKNGSRLSIATFYNPAG 254 (303)
T ss_pred HHhCCeeecccceeecCCCCCEEEEEEEEcCCC
Confidence 579988767788999999999653
No 47
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=76.75 E-value=8 Score=39.54 Aligned_cols=80 Identities=21% Similarity=0.261 Sum_probs=57.4
Q ss_pred EEEEeC----CCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGK----DRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~----~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+ +....+++|+|-+.+||...- ++ -|||.... ..+++.+.+.+|..||.-|.
T Consensus 217 l~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~-~~--v~GLQV~~------------~g~W~~V~p~pgalVVNiGD~l~~ 281 (362)
T PLN02393 217 VNYYPKCPQPDLTLGLSPHSDPGGMTILLPD-DN--VAGLQVRR------------DDAWITVKPVPDAFIVNIGDQIQV 281 (362)
T ss_pred eeecCCCCCcccccccccccCCceEEEEeeC-CC--CCcceeeE------------CCEEEECCCCCCeEEEEcchhhHh
Confidence 356743 234468899999999996541 11 25666542 13578889999999999987
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+..-....||.++.|+.-+
T Consensus 282 ~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~ 312 (362)
T PLN02393 282 LSNAIYKSVEHRVIVNSAKERVSLAFFYNPK 312 (362)
T ss_pred hcCCeeeccceecccCCCCCEEEEEEEecCC
Confidence 56888654456799999999865
No 48
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=76.46 E-value=8 Score=39.02 Aligned_cols=80 Identities=20% Similarity=0.162 Sum_probs=58.2
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+- .+..++.|+|-+.+||... ++ ..|||.... ..+++.+.+.+|..||.-|.
T Consensus 194 l~~YP~~~~~~~~~g~~~HTD~g~lTlL~q--d~-~v~GLQV~~------------~g~Wi~V~p~pg~lVVNiGD~L~~ 258 (337)
T PLN02639 194 VNYYPPCPEPELTYGLPAHTDPNALTILLQ--DQ-QVAGLQVLK------------DGKWVAVNPHPGAFVINIGDQLQA 258 (337)
T ss_pred EEcCCCCCCcccccCCCCCcCCCceEEEEe--cC-CcCceEeec------------CCeEEeccCCCCeEEEechhHHHH
Confidence 3566553 2345889999999999653 21 235676541 14688899999999999985
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+.......||.+..|+.-.
T Consensus 259 ~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~ 289 (337)
T PLN02639 259 LSNGRYKSVWHRAVVNTDKERMSVASFLCPC 289 (337)
T ss_pred HhCCeeeccCcccccCCCCCEEEEEEEecCC
Confidence 67988755567899999999854
No 49
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=76.32 E-value=7.7 Score=39.66 Aligned_cols=81 Identities=20% Similarity=0.170 Sum_probs=57.2
Q ss_pred EEEEeC----CCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGK----DRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~----~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+ +....+++|+|-+.+||...=+. .-|||.... ..+++.+.+.+|..||.-|.
T Consensus 215 ~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~--~v~GLQV~~------------~g~Wi~V~p~pgalVVNiGD~L~~ 280 (361)
T PLN02758 215 MNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKG--SCVGLQILK------------DNTWVPVHPVPNALVINIGDTLEV 280 (361)
T ss_pred eecCCCCCCcccccCccCccCCceeEEEEeCCC--CCCCeeeee------------CCEEEeCCCCCCeEEEEccchhhh
Confidence 345643 23446789999999999864111 124566542 13678889999999999996
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+..-....||.+..|+...
T Consensus 281 ~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~ 311 (361)
T PLN02758 281 LTNGKYKSVEHRAVTNKEKDRLSIVTFYAPS 311 (361)
T ss_pred hcCCeeecccceeecCCCCCEEEEEEEecCC
Confidence 57888755556799999999854
No 50
>KOG3200 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.82 E-value=7.6 Score=37.01 Aligned_cols=105 Identities=23% Similarity=0.385 Sum_probs=64.2
Q ss_pred ccCCcEEEec-CCCHHHHHHHHHHHHhhh--hhhhcccccccccCCCCcccccccccChH-HHHHHHHHHHhhhhhhhhc
Q 016264 161 EPSPGVFTFE-MLQPRFCELLLAEVENFE--KWVNEAKFRIMRPNTMNKYGAVLDDFGLE-TMLDKLMETYIRPLSKVFF 236 (392)
Q Consensus 161 ep~P~Vy~fp-vftpefC~~LIeE~E~fg--~Ws~gs~~~i~rPn~mN~YgvvLddiGl~-~~~~~Ll~~yl~Pl~~~Lf 236 (392)
-.+|.++-+| +.++++=..++.-+|+-- +|..-.+ +-..|||=|...-||- ..+-..+..|+.-|...
T Consensus 9 ~~~pt~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~N------RRLqNyGGvvh~~glipeelP~wLq~~v~kinnl-- 80 (224)
T KOG3200|consen 9 KSAPTMIYIPNFITEEEENLYLSHIENAPQPKWRVLAN------RRLQNYGGVVHKTGLIPEELPPWLQYYVDKINNL-- 80 (224)
T ss_pred cccceEEEcCCccChHHHHHHHHHHhcCCCchhHHHHh------hhhhhcCCccccCCcCccccCHHHHHHHHHhhcc--
Confidence 3466777776 889998888888888753 4532222 2356788888887874 22222233344433211
Q ss_pred ccccCCCCcccceeEEEEeCCCCCCCcccccCCce---eEEEecc
Q 016264 237 AEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV---TLNVCLG 278 (392)
Q Consensus 237 Pe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~Sev---TLNI~Ln 278 (392)
++.++ ...|..|-+|-|++ .+-+|.|.-.| --.|+||
T Consensus 81 -glF~s--~~NHVLVNeY~pgq--GImPHtDGPaf~piVstiSlG 120 (224)
T KOG3200|consen 81 -GLFKS--PANHVLVNEYLPGQ--GIMPHTDGPAFHPIVSTISLG 120 (224)
T ss_pred -cccCC--CcceeEeecccCCC--CcCcCCCCCcccceEEEEecC
Confidence 22223 34577889999988 89999997653 2344554
No 51
>PLN02997 flavonol synthase
Probab=74.96 E-value=9.6 Score=38.46 Aligned_cols=79 Identities=15% Similarity=0.131 Sum_probs=57.4
Q ss_pred EEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC-----
Q 016264 252 VEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR----- 322 (392)
Q Consensus 252 VrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr----- 322 (392)
.+|-+- ....+++|+|-+.+||... ++ -|||.... ..+++.+.+.+|..||.-|.
T Consensus 188 ~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q--d~--v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~Le~~ 251 (325)
T PLN02997 188 NFYPPTQDTELVIGAAAHSDMGAIALLIP--NE--VPGLQAFK------------DEQWLDLNYINSAVVVIIGDQLMRM 251 (325)
T ss_pred ecCCCCCCcccccCccCccCCCceEEEec--CC--CCCEEEeE------------CCcEEECCCCCCeEEEEechHHHHH
Confidence 456542 2346899999999999864 32 35677642 13578889999999999996
Q ss_pred -------CCcCCccCCccceeeEeeechhhh
Q 016264 323 -------HRHGARATTSGHRVNLLLWCRSSV 346 (392)
Q Consensus 323 -------h~HeglpVTsG~RynLV~W~rss~ 346 (392)
.+|.+..-....||.+..|+.-..
T Consensus 252 TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~~ 282 (325)
T PLN02997 252 TNGRFKNVLHRAKTDKERLRISWPVFVAPRA 282 (325)
T ss_pred hCCccccccceeeCCCCCCEEEEEEEecCCC
Confidence 458886544556999999998663
No 52
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=73.00 E-value=13 Score=37.74 Aligned_cols=98 Identities=18% Similarity=0.115 Sum_probs=59.2
Q ss_pred cceeEEEEeCCCCCC----CcccccCC--------ceeEEEeccc-cccCcceEEccccccccccCCCCc-------cce
Q 016264 247 HHGFVVEYGKDRDVD----LGFHVDDS--------EVTLNVCLGK-QFTGGELFFRGTRCEKHVNTGSQT-------EEI 306 (392)
Q Consensus 247 h~~FVVrY~~~~d~~----L~~H~D~S--------evTLNI~Ln~-dFeGGgl~F~~~~c~~hv~~~~~~-------~e~ 306 (392)
++++|..=.++.+.. -.+|.|-. .|.+-|+|-+ .=+-|.|++.-..-+-.+ ....+ ...
T Consensus 114 ~~~~v~~~~~~~~~p~~~~t~~HqD~~~~~~~~~~lV~~wiAl~d~~~dnGat~vvPgSH~~~~-~~~r~d~~~y~~~~~ 192 (299)
T COG5285 114 RHGHVLWKMPGFQKPGAVATRWHQDYPLVSPGYPALVNAWIALCDFTEDNGATLVVPGSHKWDV-IPERPDHETYLERNA 192 (299)
T ss_pred cCCeEEEecCCCCCCcccccccccccccccCCccceEEEEEeccccccccCceEEEeccccccc-CCCCCCccchhhhcc
Confidence 356666666666555 88999932 2555556543 223455665432211000 01111 125
Q ss_pred eeecCCCceEEEecCCCCcCCccCCccc--eeeEeeechhh
Q 016264 307 FDYSHVPGRAVLHRGRHRHGARATTSGH--RVNLLLWCRSS 345 (392)
Q Consensus 307 ~~y~~~~G~AllHpGrh~HeglpVTsG~--RynLV~W~rss 345 (392)
+.+...+|.+|+|.|++.|+|..-++|. +.+.+-|+.+-
T Consensus 193 ~pv~lekGDallF~~~L~HaA~aNrT~~~R~A~~~~~~~~~ 233 (299)
T COG5285 193 VPVELEKGDALLFNGSLWHAAGANRTSADRVALTLQFTVSF 233 (299)
T ss_pred eeeeecCCCEEEEcchhhhhhhcCCCCcccceEEEEEeecc
Confidence 6778899999999999999999999885 34445555544
No 53
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=72.49 E-value=9.5 Score=34.64 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=47.1
Q ss_pred cceeEEEEeCCCCCCCcccccCCceeEEEecc--ccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCCC
Q 016264 247 HHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLG--KQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHR 324 (392)
Q Consensus 247 h~~FVVrY~~~~d~~L~~H~D~SevTLNI~Ln--~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh~ 324 (392)
...++.+-.|+. .+.+|+|.+...+.+-|+ -. -++++|.-.+ + .+.-+.|.++++-.+..
T Consensus 80 ~~~~~s~l~pg~--~I~pH~d~~~~~lR~Hl~L~~p--~~~~~~~v~~------------~--~~~w~~G~~~~fD~s~~ 141 (163)
T PF05118_consen 80 GRVRFSRLPPGT--HIKPHRDPTNLRLRLHLPLIVP--NPGCYIRVGG------------E--TRHWREGECWVFDDSFE 141 (163)
T ss_dssp EEEEEEEEECTE--EEEEE-SS-TTEEEEEEEEC----STTEEEEETT------------E--EEB--CTEEEEE-TTS-
T ss_pred hhEEEEEECCCC--EECCeeCCCCcceEEEEEEEcC--CCCeEEEECC------------e--EEEeccCcEEEEeCCEE
Confidence 344556666755 999999987655555443 22 2445554211 1 23568999999999999
Q ss_pred cCCccCCccceeeEee
Q 016264 325 HGARATTSGHRVNLLL 340 (392)
Q Consensus 325 HeglpVTsG~RynLV~ 340 (392)
|++.--....|++|++
T Consensus 142 H~~~N~~~~~Rv~L~v 157 (163)
T PF05118_consen 142 HEVWNNGDEDRVVLIV 157 (163)
T ss_dssp EEEEESSSS-EEEEEE
T ss_pred EEEEeCCCCCEEEEEE
Confidence 9999999999999986
No 54
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=71.13 E-value=9.1 Score=38.71 Aligned_cols=81 Identities=20% Similarity=0.253 Sum_probs=60.3
Q ss_pred EEEEeC----CCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGK----DRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~----~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|.+ +.--.+++|.|.|-+|+.+.-+ +=|||.+.. ++.+++.+.|.+|.-||.-|.
T Consensus 180 ~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~---~V~GLQv~~-----------~dg~Wi~V~P~p~a~vVNiGD~l~~ 245 (322)
T KOG0143|consen 180 LNYYPPCPEPELTLGLGAHTDKSFLTILLQDD---DVGGLQVFT-----------KDGKWIDVPPIPGAFVVNIGDMLQI 245 (322)
T ss_pred EeecCCCcCccccccccCccCcCceEEEEccC---CcCceEEEe-----------cCCeEEECCCCCCCEEEEcccHHhH
Confidence 467755 4455788999999988876432 345566553 124678889999999999865
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+.....+.||.+..|+-..
T Consensus 246 lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~ 276 (322)
T KOG0143|consen 246 LSNGRYKSVLHRVVVNGEKERISVAFFVFPP 276 (322)
T ss_pred hhCCcccceEEEEEeCCCCceEEEEEEecCC
Confidence 67999999989999999888743
No 55
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=70.27 E-value=11 Score=37.97 Aligned_cols=83 Identities=13% Similarity=0.110 Sum_probs=58.5
Q ss_pred EEEEeCCC-----CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC---
Q 016264 251 VVEYGKDR-----DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--- 322 (392)
Q Consensus 251 VVrY~~~~-----d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr--- 322 (392)
+.+|-+-. +-.+++|+|-+.+||... ++ -|||...... .....+++.+.+.+|..||.-|.
T Consensus 186 l~~YP~~~~~~~~~~g~~~HTD~g~lTlL~q--d~--v~GLQV~~~~-------~~~~g~Wi~Vpp~pg~~VVNiGD~L~ 254 (332)
T PLN03002 186 LLRYQGISDPSKGIYACGAHSDFGMMTLLAT--DG--VMGLQICKDK-------NAMPQKWEYVPPIKGAFIVNLGDMLE 254 (332)
T ss_pred eeeCCCCCCcccCccccccccCCCeEEEEee--CC--CCceEEecCC-------CCCCCcEEECCCCCCeEEEEHHHHHH
Confidence 46676532 335789999999999854 33 4677764211 00124688899999999999987
Q ss_pred ---------CCcCCccCCccceeeEeeechhh
Q 016264 323 ---------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 ---------h~HeglpVTsG~RynLV~W~rss 345 (392)
.+|.+. +.+..||.+..|+.-.
T Consensus 255 ~wTng~~kSt~HRVv-~~~~~R~Sia~F~~p~ 285 (332)
T PLN03002 255 RWSNGFFKSTLHRVL-GNGQERYSIPFFVEPN 285 (332)
T ss_pred HHhCCeeECcCCeec-CCCCCeeEEEEEecCC
Confidence 459886 3356799999999865
No 56
>PHA02866 Hypothetical protein; Provisional
Probab=60.93 E-value=79 Score=32.49 Aligned_cols=151 Identities=13% Similarity=0.150 Sum_probs=85.3
Q ss_pred CCcEEEecCCCHHHHHHHHHHHHhh-hhhhhcccccccccCCCCcccccccccChHHHHHHHHHHHhhhhhhhhcccccC
Q 016264 163 SPGVFTFEMLQPRFCELLLAEVENF-EKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGG 241 (392)
Q Consensus 163 ~P~Vy~fpvftpefC~~LIeE~E~f-g~Ws~gs~~~i~rPn~mN~YgvvLddiGl~~~~~~Ll~~yl~Pl~~~LfPe~~g 241 (392)
..||.+...|..+| ..+.+++... ..|-. |+. -| +.+.-.+..--.+--+...+..+ .++-+.+--+|.+ .
T Consensus 5 ~~~~~~~~~f~~~f-~~i~~~~~~m~~~w~~-s~i--~~--~~~~i~~~~~~~~k~k~~~~v~~-~v~~~~~~~~~~~-d 76 (333)
T PHA02866 5 TDGVLRLKSFRDDF-KGIKEELKFMLNSWED-SDI--LR--HRQFIPCEILVLEKSERTKQVFG-AVKRVLASSLTDY-D 76 (333)
T ss_pred eCCeEEEEEhhhhh-hhHHHHHHHHHhccch-hhh--hh--hccCCceeeeehhhhhhhHHHHH-HHHHHHhccCCCc-c
Confidence 46888899999985 4444444332 23622 222 11 11111111000111122233332 2222333333432 1
Q ss_pred CCCcccceeEEEEeCCCCCCCccccc----C----CceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCC
Q 016264 242 STLDSHHGFVVEYGKDRDVDLGFHVD----D----SEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVP 313 (392)
Q Consensus 242 ~~Ldsh~~FVVrY~~~~d~~L~~H~D----~----SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~ 313 (392)
.-++.|..+ |+|..+- +|.-|+| + -+++|.++|+.-=+||++.++=..++. ...
T Consensus 77 v~v~~~~t~-vk~~kg~--~fdn~~~~~~~~~~~~~~Y~LvLyL~~p~~GGkt~iyv~~~t~---------------i~~ 138 (333)
T PHA02866 77 VYVCEHLTI-VKCFKGV--GFDNRFSILTEDRHRGREYTLVLHLSSPKNGGKTDVCVGDKTV---------------IST 138 (333)
T ss_pred EEEeeeEEE-EEEeccc--ccccceeEEEeccCCceEEEEEEEEeccccCCceEEEeCCCce---------------Eee
Confidence 233556554 8887654 6666665 3 369999999998899999998443332 233
Q ss_pred ceEEEecCCCCcCCccCCccceeeEe
Q 016264 314 GRAVLHRGRHRHGARATTSGHRVNLL 339 (392)
Q Consensus 314 G~AllHpGrh~HeglpVTsG~RynLV 339 (392)
-.=+||--+..|+..-|.+|++++++
T Consensus 139 ~~DvLFDKsl~h~S~~V~~G~K~Val 164 (333)
T PHA02866 139 ADDFLLEKRSEQLSNVVQEGEKIVVA 164 (333)
T ss_pred ccceeeeccccccceeeecCcEEEEE
Confidence 45588999999999999999997664
No 57
>PHA02923 hypothetical protein; Provisional
Probab=55.90 E-value=29 Score=35.37 Aligned_cols=77 Identities=14% Similarity=0.213 Sum_probs=59.1
Q ss_pred cccceeEEEEeCCCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCCC
Q 016264 245 DSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHR 324 (392)
Q Consensus 245 dsh~~FVVrY~~~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh~ 324 (392)
+.+-.| ++|.++.+-.+ .| |+-++.|.++|+..=+||.+.|...+-+ ...-.=+||--+.-
T Consensus 66 ~n~iT~-ikYekgd~~~l-~~-~~~~y~LvLyL~~p~~GGt~i~~~~~t~----------------i~~~~DvLFdKsl~ 126 (315)
T PHA02923 66 SSTISF-IKYNPFNDTTL-TD-DNMGYYLVIYLNRPKSGKTLIYPTPETV----------------ITSSEDIMFSKSLN 126 (315)
T ss_pred eceEEE-EEEcCCCccee-ec-CceEEEEEEEEeccCCCCeEEEecCCCe----------------Eeeccceeeecccc
Confidence 455555 89999886455 34 6678999999998778999998875522 23344578999999
Q ss_pred cCCccCCccceeeEee
Q 016264 325 HGARATTSGHRVNLLL 340 (392)
Q Consensus 325 HeglpVTsG~RynLV~ 340 (392)
|+..-|.+|++.+++.
T Consensus 127 h~s~~V~~G~K~VAl~ 142 (315)
T PHA02923 127 FRFENVKRGYKLVMCS 142 (315)
T ss_pred cceeeeecCcEEEEEE
Confidence 9999999999998655
No 58
>PF10637 Ofd1_CTDD: Oxoglutarate and iron-dependent oxygenase degradation C-term; InterPro: IPR019601 This entry represents the C-terminal degradation domain of oxoglutarate and iron-dependent oxygenase (Ofd1), the domain being conserved from yeasts to humans. Ofd1 is a prolyl 4-hydroxylase-like 2-oxoglutarate-Fe(II) dioxygenase that accelerates the degradation of Sre1N (the N-terminal transcription factor domain of Sre1) in the presence of oxygen []. Yeast Sre1 is the orthologue of mammalian sterol regulatory element binding protein (SREBP), and it responds to changes in oxygen-dependent sterol synthesis as an indirect measure of oxygen availability. However, unlike the prolyl 4-hydroxylases that regulate mammalian hypoxia-inducible factor, Ofd1 uses multiple domains to regulate Sre1N degradation by oxygen; the Ofd1 N-terminal dioxygenase domain is required for oxygen sensing and this Ofd1 C-terminal domain accelerates Sre1N degradation in yeasts []. ; GO: 0005506 iron ion binding, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0031418 L-ascorbic acid binding, 0055114 oxidation-reduction process; PDB: 3KT4_A 3KT1_A 3KT7_A 3MGU_A.
Probab=53.55 E-value=29 Score=34.50 Aligned_cols=127 Identities=18% Similarity=0.257 Sum_probs=50.0
Q ss_pred CcEEEecCCCHHHHHHHHHHHHhhhhh-----hhcc----cccccccCCCCccccccccc----------ChHHH----H
Q 016264 164 PGVFTFEMLQPRFCELLLAEVENFEKW-----VNEA----KFRIMRPNTMNKYGAVLDDF----------GLETM----L 220 (392)
Q Consensus 164 P~Vy~fpvftpefC~~LIeE~E~fg~W-----s~gs----~~~i~rPn~mN~YgvvLddi----------Gl~~~----~ 220 (392)
.-|---.||.+++++.|-+.++.-+.- .... +-.+.+|-+..+|-.+-..- +++.. +
T Consensus 31 S~i~L~~FL~~~~~~~L~~~l~~~e~~~~~~p~~~~~~~~~W~~~gPphK~rY~~~~~~~~~~~~~~~~~pl~e~~~~~l 110 (266)
T PF10637_consen 31 SEIQLENFLKPEKAEQLKEALESQEIEDLSLPQSSKEVEKPWKVAGPPHKRRYLYLDPKSEASINSDNKSPLPELPPFLL 110 (266)
T ss_dssp SEEEESS-B-HHHHHHHHHHHHHHHHH-S----SGGG--TT-EE-B-TTTEE-EEE-SSSHHHHHHHH---------SHH
T ss_pred ceEeHHHhcCHHHHHHHHHHHHhhccccccCCCcccccCCCceECCCChhhheeEeCCcccccccccccccccchhHHHH
Confidence 355666799999999999988754320 0000 01223455555565542222 12111 1
Q ss_pred HHHHHHHhhhhhhhhcccccCCCCcccceeEEEEeCCCCCCCccccc--CCceeEEEecc-c------cccCcceEEcc
Q 016264 221 DKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD--DSEVTLNVCLG-K------QFTGGELFFRG 290 (392)
Q Consensus 221 ~~Ll~~yl~Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D--~SevTLNI~Ln-~------dFeGGgl~F~~ 290 (392)
..+..-+-+....++.-.+.|-.+-++...+-|+.+|.|=-|.-..| +..+-+++||+ . ++-|-++|..+
T Consensus 111 ~~l~~lf~S~aF~~~L~~~TgL~l~~~~~~~RRfr~G~dYTLa~~~~~~~~~Ld~~L~ltp~~~W~~~e~GG~e~Ym~~ 189 (266)
T PF10637_consen 111 RELMDLFKSEAFFKWLSNLTGLDLTSCQIEARRFRPGLDYTLATDEDEEEPRLDVTLCLTPSKGWESGEVGGYECYMAG 189 (266)
T ss_dssp HHHHHHHHSHHHHHHHHHHHSEEE-EEEEEEEEE-TTT-EE--B---EEEEEEEEEEEE---S-TTTTTT---EEEEE-
T ss_pred HHHHHHcCCHHHHHHHHHHHCCCCccCceEEEEccCCCCeEEecCCCCCceEEEEEEEecCCCCCCCCccccEEEEEcC
Confidence 11111111111111112223333344455667888886555655555 34455555554 2 67777888844
No 59
>KOG3889 consensus Predicted gamma-butyrobetaine,2-oxoglutarate dioxygenase [Lipid transport and metabolism]
Probab=43.74 E-value=33 Score=35.00 Aligned_cols=80 Identities=21% Similarity=0.370 Sum_probs=51.1
Q ss_pred ccccc-ccccChHHHHHHHHHHHhhhhhhhhcccccCCCCc-ccceeEEEEeCCCCCCCcccccCCc------eeEEEec
Q 016264 206 KYGAV-LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLD-SHHGFVVEYGKDRDVDLGFHVDDSE------VTLNVCL 277 (392)
Q Consensus 206 ~Ygvv-LddiGl~~~~~~Ll~~yl~Pl~~~LfPe~~g~~Ld-sh~~FVVrY~~~~d~~L~~H~D~Se------vTLNI~L 277 (392)
.||++ +|++.-...-+..+-+.+.|+-..+|.+.--.+=+ ++. -.-|. -..|++|+|++- +-+.=||
T Consensus 136 ~YGi~fvd~V~pT~e~TEkl~~r~~pv~~TffG~mW~Fsd~p~~~--DTAYt---kl~lg~HTD~TYF~~~~GiQvfHCl 210 (371)
T KOG3889|consen 136 KYGIIFVDGVEPTSEATEKLCQRLVPVHDTFFGQMWVFSDEPAYE--DTAYT---KLELGPHTDGTYFDQTPGIQVFHCL 210 (371)
T ss_pred heeEEEEcCCCchhHHHHHHHHHhhHHHHhhhheeEEecCCCccc--cccce---eeeecccCCCceeccCCCceEEEee
Confidence 48887 45554444455555568999999999654111101 110 12243 237999999864 5677788
Q ss_pred cccccCcceEEcc
Q 016264 278 GKQFTGGELFFRG 290 (392)
Q Consensus 278 n~dFeGGgl~F~~ 290 (392)
.-.=+||++.|-+
T Consensus 211 ~h~gtGG~t~lVD 223 (371)
T KOG3889|consen 211 THAGTGGDTVLVD 223 (371)
T ss_pred cccCCCCceEEEe
Confidence 8888999999964
No 60
>PF11265 Med25_VWA: Mediator complex subunit 25 von Willebrand factor type A; InterPro: IPR021419 The overall function of the full-length Med25 is efficiently to coordinate the transcriptional activation of RAR/RXR (retinoic acid receptor/retinoic X receptor) in higher eukaryotic cells. Human Med25 consists of several domains with different binding properties, the N-terminal, VWA domain which is this one, an SD2 domain from residues 229-381, a PTOV(B) or ACID domain from 395-545, an SD2 domain from residues 564-645 and a C-terminal NR box-containing domain (646-650) from 646-747. This VWA or von Willebrand factor type A domain when bound to RAR and the histone acetyltransferase CBP is responsible for recruiting Med1 to the rest of the Mediator complex [].
Probab=38.86 E-value=43 Score=32.76 Aligned_cols=71 Identities=24% Similarity=0.257 Sum_probs=44.0
Q ss_pred ChHHHHHHHHHHHhhhhhhhhcccc-c-----CCCCcccceeEEEEeCCCCCCCcccccCCceeEEEec------ccccc
Q 016264 215 GLETMLDKLMETYIRPLSKVFFAEV-G-----GSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCL------GKQFT 282 (392)
Q Consensus 215 Gl~~~~~~Ll~~yl~Pl~~~LfPe~-~-----g~~Ldsh~~FVVrY~~~~d~~L~~H~D~SevTLNI~L------n~dFe 282 (392)
.+-..|+.|..+||-|+.+.+..+. . +.......+.||-...+ ..-.+=.+-+.+|-++.. +-+|.
T Consensus 25 algpy~~~Lkt~Yl~P~le~f~~g~~~e~~~~~~~~~t~y~LVvf~t~d--~~~~~~v~~~g~T~~~~~fl~~L~~I~f~ 102 (226)
T PF11265_consen 25 ALGPYWNTLKTNYLDPILEYFNGGPIAERDFGGDYSNTEYGLVVFNTAD--CYPEPIVQRSGPTSSPQKFLQWLDAIQFS 102 (226)
T ss_pred hhhhhHHHHHHHHHHHHHHHhcCCCcccccccccCCCceEEEEEEeccC--CCcccceeccCCcCCHHHHHHHHHccCcC
Confidence 4558999999999999999887422 1 11123345555544332 244444455666766655 34899
Q ss_pred CcceE
Q 016264 283 GGELF 287 (392)
Q Consensus 283 GGgl~ 287 (392)
|||..
T Consensus 103 GGG~e 107 (226)
T PF11265_consen 103 GGGFE 107 (226)
T ss_pred CCCcc
Confidence 98854
No 61
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.47 E-value=11 Score=33.83 Aligned_cols=28 Identities=25% Similarity=0.527 Sum_probs=19.9
Q ss_pred CCccceeeEeeechhhhHHHHHhhhhccccccccch
Q 016264 330 TTSGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECF 365 (392)
Q Consensus 330 VTsG~RynLV~W~rss~~R~~~~y~~~f~~~c~~c~ 365 (392)
+++|.+ |.|+|+=|-.=+ +=.+|||-|.
T Consensus 22 ~~n~~~-ifvlF~gskd~~-------tGqSWCPdCV 49 (128)
T KOG3425|consen 22 VENGKT-IFVLFLGSKDDT-------TGQSWCPDCV 49 (128)
T ss_pred HhCCce-EEEEEecccCCC-------CCCcCCchHH
Confidence 568888 999998765222 2239999994
No 62
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=38.44 E-value=63 Score=32.82 Aligned_cols=73 Identities=22% Similarity=0.307 Sum_probs=0.0
Q ss_pred ccccc-ccccChHHHHHHHHHHHhhhhhhhhcccccCCCCcccceeEEEEeCCCCC------CCcccccCCc------ee
Q 016264 206 KYGAV-LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDV------DLGFHVDDSE------VT 272 (392)
Q Consensus 206 ~Ygvv-LddiGl~~~~~~Ll~~yl~Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~------~L~~H~D~Se------vT 272 (392)
.||++ +.++..+..-..-+.+.+.|+....|. ..|.|+..++.+. .+.+|+|.+- ++
T Consensus 134 ~~G~v~~rg~~~~~~~~~~~~~~~G~~~~~~~g----------~~~~v~~~~~~~~~~yt~~~l~~HtD~~y~~~pP~~~ 203 (366)
T TIGR02409 134 DVGIAVLKGAPTKPGAVEKLGKRIGFIRETNYG----------LLFEVRLKADANNLAYTNGGLPFHTDNPYRDHPPGLQ 203 (366)
T ss_pred hccEEEEeCCCCCHHHHHHHHHHhccccccCCC----------CeEEEEecCCccccccccccccccccCCccCCCCcee
Q ss_pred EEEeccccccCcceEE
Q 016264 273 LNVCLGKQFTGGELFF 288 (392)
Q Consensus 273 LNI~Ln~dFeGGgl~F 288 (392)
+.-|+...=+||++.|
T Consensus 204 ~L~c~~~~~~GG~T~~ 219 (366)
T TIGR02409 204 LLHCLESTVEGGDSLF 219 (366)
T ss_pred eeeecccCCCCcceee
No 63
>PRK13916 plasmid segregation protein ParR; Provisional
Probab=37.45 E-value=16 Score=30.98 Aligned_cols=30 Identities=37% Similarity=0.603 Sum_probs=24.6
Q ss_pred hhHHHHhhhcCCCccCCCCHHHHHHHHHHHHHHhCCch
Q 016264 69 PSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQG 106 (392)
Q Consensus 69 ~~~~~~~e~~lp~~~~~~~~~~k~~~~~~il~~~~~~~ 106 (392)
|.+|.-|| +.||-.|-.|.|++|++|+.+.
T Consensus 18 ~~iF~FL~--------~~P~GT~~~~iR~~L~rYI~~~ 47 (97)
T PRK13916 18 PQIFDFLE--------NVPRGTKTAHIREALRRYIEEI 47 (97)
T ss_pred HHHHHHHH--------HCCCCCccHHHHHHHHHHHHhc
Confidence 56777776 6788889999999999998763
No 64
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=36.09 E-value=52 Score=31.38 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=27.6
Q ss_pred CCCCcccccCC------ceeEEEeccccccCcceEEcc
Q 016264 259 DVDLGFHVDDS------EVTLNVCLGKQFTGGELFFRG 290 (392)
Q Consensus 259 d~~L~~H~D~S------evTLNI~Ln~dFeGGgl~F~~ 290 (392)
...+.+|+|.+ .+.+.-||..+-+||++.|..
T Consensus 93 ~~~l~~HtD~~y~~~pp~~~~L~cl~~~~~GG~T~~vd 130 (262)
T cd00250 93 NTLLPLHTDLAYHEYRPGLQILHCLRNTATGGATLLVD 130 (262)
T ss_pred cCCcCccccCCCCCCCCceEEEEEeccCCCCCcceeee
Confidence 45789999975 689999998778899999986
No 65
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=33.70 E-value=84 Score=32.03 Aligned_cols=75 Identities=19% Similarity=0.294 Sum_probs=0.0
Q ss_pred ccccc-ccccChHHHHHHHHHHHhhhhhhhhcccccCCCCcccceeEEEEeCCC------CCCCcccccCCc------ee
Q 016264 206 KYGAV-LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDR------DVDLGFHVDDSE------VT 272 (392)
Q Consensus 206 ~Ygvv-LddiGl~~~~~~Ll~~yl~Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~------d~~L~~H~D~Se------vT 272 (392)
+||++ +.++..+..-..-+.+.+.|+-...|. ..|.|..+++. ...+.+|+|.+- ++
T Consensus 126 ~~G~v~~~g~~~~~~~~~~~a~riG~~r~t~~g----------~~~~v~~~~~~~~~ayt~~~l~~HtD~~y~~~pp~~~ 195 (362)
T TIGR02410 126 KYGFTFVDNVPVTPEATEKLCERISIIRPTHYG----------GFWDFTSDLSKNDTAYTSLAIDMHTDGTYWDETPGLQ 195 (362)
T ss_pred hhCEEEEcCCCCCHHHHHHHHHHhccceecCCC----------CeEEEEecCCCcccccccCCccccccCCCCCCCCcce
Q ss_pred EEEeccccccCcceEEcc
Q 016264 273 LNVCLGKQFTGGELFFRG 290 (392)
Q Consensus 273 LNI~Ln~dFeGGgl~F~~ 290 (392)
+.-||-..=+||++.|..
T Consensus 196 ~L~c~~~~~~GG~t~~~d 213 (362)
T TIGR02410 196 LFHCLTHDGTGGETVLVD 213 (362)
T ss_pred eEeeeecCCCCCceeeee
No 66
>KOG4459 consensus Membrane-associated proteoglycan Leprecan [Function unknown]
Probab=31.92 E-value=30 Score=37.16 Aligned_cols=64 Identities=25% Similarity=0.391 Sum_probs=47.8
Q ss_pred EEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC--CCcCCccCCccceeeEeeechhh
Q 016264 273 LNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 273 LNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr--h~HeglpVTsG~RynLV~W~rss 345 (392)
....+++||+||++.|....-.. ++ ...+++.|.-+-+..+ .-|+..+||+|.|-.+-+|.-.+
T Consensus 370 a~~~~~dd~~~~el~~t~~d~~t-~~--------a~~k~~~~re~~~~~g~e~~~~~~~~~kg~e~~~~lw~~~~ 435 (471)
T KOG4459|consen 370 ALLYLNDDFEGGELLFTEPDAKT-YT--------AISKPECGRECAFSSGAENPHGVKAVTKGLECAVALWPTLA 435 (471)
T ss_pred ccHhhcCccccccceecCCcccc-hh--------hccccccccchhhhccccCccchhhhhhhhHHhhhcCcccC
Confidence 34456899999999998654221 11 1235677777766655 88999999999999999998866
No 67
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=30.80 E-value=17 Score=30.55 Aligned_cols=10 Identities=20% Similarity=0.683 Sum_probs=8.0
Q ss_pred ccccccchhh
Q 016264 358 SSWCGECFRE 367 (392)
Q Consensus 358 ~~~c~~c~~~ 367 (392)
+.||+.|.++
T Consensus 32 a~~C~~C~~~ 41 (126)
T cd03012 32 TYCCINCLHT 41 (126)
T ss_pred CCCCccHHHH
Confidence 3899999765
No 68
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=29.42 E-value=25 Score=26.68 Aligned_cols=13 Identities=31% Similarity=0.447 Sum_probs=9.8
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+.|..-+..
T Consensus 8 ~~~C~~C~~~~~~ 20 (82)
T TIGR00411 8 SPTCPYCPAAKRV 20 (82)
T ss_pred CCCCcchHHHHHH
Confidence 4899999765554
No 69
>cd02967 mauD Methylamine utilization (mau) D family; mauD protein is the translation product of the mauD gene found in methylotrophic bacteria, which are able to use methylamine as a sole carbon source and a nitrogen source. mauD is an essential accessory protein for the biosynthesis of methylamine dehydrogenase (MADH), the enzyme that catalyzes the oxidation of methylamine and other primary amines. MADH possesses an alpha2beta2 subunit structure; the alpha subunit is also referred to as the large subunit. Each beta (small) subunit contains a tryptophan tryptophylquinone (TTQ) prosthetic group. Accessory proteins are essential for the proper transport of MADH to the periplasm, TTQ synthesis and the formation of several structural disulfide bonds. Bacterial mutants containing an insertion on the mauD gene were unable to grow on methylamine as a sole carbon source, were found to lack the MADH small subunit and had decreased amounts of the MADH large subunit.
Probab=29.06 E-value=33 Score=27.79 Aligned_cols=12 Identities=17% Similarity=0.235 Sum_probs=9.1
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+.|..+-..
T Consensus 31 ~wC~~C~~~~p~ 42 (114)
T cd02967 31 PTCPVCKKLLPV 42 (114)
T ss_pred CCCcchHhHhHH
Confidence 899999766433
No 70
>KOG3844 consensus Predicted component of NuA3 histone acetyltransferase complex [Chromatin structure and dynamics]
Probab=27.89 E-value=8e+02 Score=26.53 Aligned_cols=176 Identities=15% Similarity=0.181 Sum_probs=101.2
Q ss_pred ccCCcEEEecCCCHHHHHHHHHHHHhhhhhhhcccccccccCCCCccccc--ccccChH---HHHHHHHHHHhhhhhhhh
Q 016264 161 EPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV--LDDFGLE---TMLDKLMETYIRPLSKVF 235 (392)
Q Consensus 161 ep~P~Vy~fpvftpefC~~LIeE~E~fg~Ws~gs~~~i~rPn~mN~Ygvv--LddiGl~---~~~~~Ll~~yl~Pl~~~L 235 (392)
.|.+-+..=+++++.--+..-.|++++..|.- ...++-| .++-|=+ ++.+.+. .+=+-|.+++-.-|
T Consensus 34 gPf~h~~i~~~vnd~~l~~vrkei~~~~~f~~-k~tDlyr---~~QtgdL~nl~~le~p~lf~~r~~Lyke~r~~~---- 105 (476)
T KOG3844|consen 34 GPFNHFIIRDFVNDSLLRVVRKEIHGSIHFTE-KETDLYR---VLQTGDLANLEGLEFPALFSFRDSLYKEARGEI---- 105 (476)
T ss_pred CCCcceeeeccCCHHHHHHHHHHHhhccchhh-hcchhhh---eeccccccccccccchhHHHHHHHHHHHHHHHH----
Confidence 45555555578887776666667776665532 2222211 1122211 2222221 11122222222211
Q ss_pred cccccCCCCc-ccceeEEEEeCCCCCCCcccccCC---ceeEEEecc--c---cccCcceEEccccccccccCCCCccce
Q 016264 236 FAEVGGSTLD-SHHGFVVEYGKDRDVDLGFHVDDS---EVTLNVCLG--K---QFTGGELFFRGTRCEKHVNTGSQTEEI 306 (392)
Q Consensus 236 fPe~~g~~Ld-sh~~FVVrY~~~~d~~L~~H~D~S---evTLNI~Ln--~---dFeGGgl~F~~~~c~~hv~~~~~~~e~ 306 (392)
..+.|..+- ....++-+|..+. +|=.|-|-- .+++-.+|- + +| ||+|+.....|.-. .+ .-+
T Consensus 106 -q~vtg~~s~sk~Dms~s~Y~kgd--~LL~HDD~ietRriaFilYL~~~Dwds~~-GG~L~Lf~~d~~~~----P~-s~~ 176 (476)
T KOG3844|consen 106 -QDVTGGLSTSKIDMSGSYYRKGD--HLLCHDDVIETRRIAFILYLVDPDWDSEY-GGELRLFPDDCPSQ----PK-SVA 176 (476)
T ss_pred -HhccCccccceeeeceeeeeccc--eeccccccccceEEEEEEEecCccccccc-CceeEecccccccC----cc-chh
Confidence 222222111 2356678898766 999999954 489999994 2 46 99999988777421 01 123
Q ss_pred eeecCCCceEEEecCC--CCcCCccCCccc-eeeEeeechhhhHHHHHhh
Q 016264 307 FDYSHVPGRAVLHRGR--HRHGARATTSGH-RVNLLLWCRSSVFREMKRY 353 (392)
Q Consensus 307 ~~y~~~~G~AllHpGr--h~HeglpVTsG~-RynLV~W~rss~~R~~~~y 353 (392)
..+.|.-.+.++|.=. -.|.+--|.+-. |..+-+|......-+..+|
T Consensus 177 asl~P~~Nql~fFeVsp~SFH~V~Ev~sde~RlSIsGWfH~p~~~ePg~~ 226 (476)
T KOG3844|consen 177 ASLEPQWNQLVFFEVSPISFHDVEEVLSDEPRLSISGWFHFPQIGEPGDG 226 (476)
T ss_pred hccCcccceEEEEEecccchhhHHHHhccCcceeEeeeecCCccCCCCCC
Confidence 3456777778887666 788888887544 7999999997766554444
No 71
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=27.28 E-value=23 Score=27.74 Aligned_cols=12 Identities=17% Similarity=0.672 Sum_probs=9.4
Q ss_pred cccccccchhhH
Q 016264 357 FSSWCGECFREK 368 (392)
Q Consensus 357 f~~~c~~c~~~~ 368 (392)
|+.|||-|..-+
T Consensus 6 ~a~~C~~C~~~~ 17 (76)
T TIGR00412 6 YGTGCANCQMTE 17 (76)
T ss_pred ECCCCcCHHHHH
Confidence 579999996653
No 72
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=27.12 E-value=41 Score=31.07 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=26.4
Q ss_pred CCCcccccCC------ceeEEEeccccccCcceEEccc
Q 016264 260 VDLGFHVDDS------EVTLNVCLGKQFTGGELFFRGT 291 (392)
Q Consensus 260 ~~L~~H~D~S------evTLNI~Ln~dFeGGgl~F~~~ 291 (392)
..+.+|+|.| .+.+..|+...-+||++.|...
T Consensus 95 ~~l~~HtD~~~~~~~p~~~~L~c~~~~~~GG~T~~~d~ 132 (258)
T PF02668_consen 95 GELPWHTDGSYWPYPPDYLALYCLRPAEEGGETTFADA 132 (258)
T ss_dssp SGEEEE-TTTTSTTEESEEEEEEEEEESSSSEEEEEEH
T ss_pred cccccccccCcccCCcceeEEEeeccCCCCCccccccH
Confidence 3599999998 6899999987779999999864
No 73
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=25.27 E-value=31 Score=27.20 Aligned_cols=13 Identities=0% Similarity=-0.335 Sum_probs=9.8
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+.|.+.+..
T Consensus 21 a~wC~~C~~~~~~ 33 (96)
T cd02956 21 APRSPPSKELLPL 33 (96)
T ss_pred CCCChHHHHHHHH
Confidence 3899999766554
No 74
>PF15379 DUF4606: Domain of unknown function (DUF4606)
Probab=25.05 E-value=68 Score=27.97 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=12.9
Q ss_pred ccccccccchhhHHHHH
Q 016264 356 DFSSWCGECFREKKERQ 372 (392)
Q Consensus 356 ~f~~~c~~c~~~~~~~~ 372 (392)
-=|+.||.|++.+.|=.
T Consensus 29 H~~s~Cp~C~kkraeLa 45 (104)
T PF15379_consen 29 HNSSQCPSCNKKRAELA 45 (104)
T ss_pred cCcccChHHHHHHHHHH
Confidence 34799999988877633
No 75
>TIGR02738 TrbB type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold, contains a conserved pair of cysteines and has been shown to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. The protein is closely related to TraF (TIGR02739) which is somewhat longer, lacks the cysteine motif and is apparently not functional as a disulfide bond isomerase.
Probab=24.53 E-value=28 Score=31.53 Aligned_cols=12 Identities=25% Similarity=0.335 Sum_probs=9.1
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
+|||-|..+.-.
T Consensus 60 sWCppCr~e~P~ 71 (153)
T TIGR02738 60 STCPYCHQFAPV 71 (153)
T ss_pred CCChhHHHHHHH
Confidence 899999766543
No 76
>PF13905 Thioredoxin_8: Thioredoxin-like; PDB: 1FG4_A 1I5G_A 1OC8_B 1O6J_A 1OC9_B 1O81_A 3FKF_A 1O85_A 1O7U_A 1O8W_A ....
Probab=24.48 E-value=25 Score=27.63 Aligned_cols=10 Identities=40% Similarity=1.378 Sum_probs=7.2
Q ss_pred cccccccchh
Q 016264 357 FSSWCGECFR 366 (392)
Q Consensus 357 f~~~c~~c~~ 366 (392)
+++||+.|..
T Consensus 9 wa~~c~~c~~ 18 (95)
T PF13905_consen 9 WASWCPPCKK 18 (95)
T ss_dssp E-TTSHHHHH
T ss_pred ECCCCHHHHH
Confidence 3589999954
No 77
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=23.83 E-value=2.6e+02 Score=28.97 Aligned_cols=73 Identities=12% Similarity=0.088 Sum_probs=44.8
Q ss_pred eeEEEEeCCCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCCCcCCc
Q 016264 249 GFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGAR 328 (392)
Q Consensus 249 ~FVVrY~~~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh~Hegl 328 (392)
...+++.++.-..+-+| .+.|+.+-+. |.+++.=.+. ..+.+.....+|..+++|....|.-.
T Consensus 69 ~~~~~l~pG~~~~~HwH-~~~E~~yVl~-------G~~~v~~~d~---------~g~~~~~~L~~GD~~~fP~g~~H~~~ 131 (367)
T TIGR03404 69 GVNMRLEPGAIRELHWH-KEAEWAYVLY-------GSCRITAVDE---------NGRNYIDDVGAGDLWYFPPGIPHSLQ 131 (367)
T ss_pred ceEEEEcCCCCCCcccC-CCceEEEEEe-------eEEEEEEEcC---------CCcEEEeEECCCCEEEECCCCeEEEE
Confidence 34577888876677777 4567544442 2332221110 01223335789999999999999988
Q ss_pred cCCccceeeE
Q 016264 329 ATTSGHRVNL 338 (392)
Q Consensus 329 pVTsG~RynL 338 (392)
.+..+.++++
T Consensus 132 n~~~~~~~l~ 141 (367)
T TIGR03404 132 GLDEGCEFLL 141 (367)
T ss_pred ECCCCeEEEE
Confidence 8866766444
No 78
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=23.82 E-value=6.3e+02 Score=23.95 Aligned_cols=124 Identities=18% Similarity=0.225 Sum_probs=64.6
Q ss_pred cChHHHHHHHHHHHhhhhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCCceeEEEeccccccCcc-eEEcccc
Q 016264 214 FGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGE-LFFRGTR 292 (392)
Q Consensus 214 iGl~~~~~~Ll~~yl~Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~SevTLNI~Ln~dFeGGg-l~F~~~~ 292 (392)
+.|.++++.=.. .|-|.++...+-....|.|..-.+......+|.+.++=.+-+- +|.- +.+.+.
T Consensus 7 ~n~~~Wieen~~--------~l~pPv~n~~l~~~~d~~VmvvgGpn~r~d~H~~~tdE~Fyql-----eG~~~l~v~d~- 72 (177)
T PRK13264 7 FNLHKWIEEHRH--------LLKPPVGNKQIWQDSDFIVMVVGGPNARTDFHYDPGEEFFYQL-----EGDMYLKVQED- 72 (177)
T ss_pred ccHHHHHHhhHH--------HhCCCCCCeeeEcCCCEEEEEEccCCcccccccCCCceEEEEE-----CCeEEEEEEcC-
Confidence 556665544333 2334454443322224555554455558999998876444332 2221 111110
Q ss_pred ccccccCCCCccceeeecCCCceEEEecCCCCcCCccCCccceeeEeeechhhhHHHHHhhhhccccccccchhhHH
Q 016264 293 CEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECFREKK 369 (392)
Q Consensus 293 c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh~HeglpVTsG~RynLV~W~rss~~R~~~~y~~~f~~~c~~c~~~~~ 369 (392)
.+..++...+|..++.|+...|.-.. ..|+.-.+|==-|.. .-...|--.|..|...--
T Consensus 73 -----------g~~~~v~L~eGd~fllP~gvpHsP~r-~~~tv~LviE~~r~~------~~~d~~~wyc~~c~~~~~ 131 (177)
T PRK13264 73 -----------GKRRDVPIREGEMFLLPPHVPHSPQR-EAGSIGLVIERKRPE------GELDGFQWYCDECNHKVH 131 (177)
T ss_pred -----------CceeeEEECCCCEEEeCCCCCcCCcc-CCCeEEEEEEeCCCC------CCccceEEECCCCCCeEE
Confidence 01112357899999999999998866 345443333222211 112345566888865433
No 79
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=23.40 E-value=32 Score=28.31 Aligned_cols=13 Identities=23% Similarity=0.744 Sum_probs=10.4
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+-|.+-++.
T Consensus 30 a~wC~~C~~~~~~ 42 (109)
T cd02993 30 APWCPFCQAMEAS 42 (109)
T ss_pred CCCCHHHHHHhHH
Confidence 3899999877665
No 80
>PF04378 RsmJ: Ribosomal RNA small subunit methyltransferase D, RsmJ; InterPro: IPR007473 This is a bacterial protein of unknown function, possibly secreted.; PDB: 2OO3_A.
Probab=23.29 E-value=1.1e+02 Score=30.22 Aligned_cols=60 Identities=13% Similarity=0.199 Sum_probs=33.3
Q ss_pred cEEEecCCCHHHHHHHHHHHHhhhh--hhhcccc---cccccCCCCcccccccc-c-ChHHHHHHHHH
Q 016264 165 GVFTFEMLQPRFCELLLAEVENFEK--WVNEAKF---RIMRPNTMNKYGAVLDD-F-GLETMLDKLME 225 (392)
Q Consensus 165 ~Vy~fpvftpefC~~LIeE~E~fg~--Ws~gs~~---~i~rPn~mN~YgvvLdd-i-Gl~~~~~~Ll~ 225 (392)
-+.|.|+++.+..+.|++.+.+-+. |-. ..+ +...+..|++-|.++-. + +|+..+..++.
T Consensus 160 ~~iWYPi~~~~~~~~~~~~l~~~~~~~~l~-~El~v~~~~~~~gm~GSGm~iiNPPw~l~~~l~~~l~ 226 (245)
T PF04378_consen 160 YAIWYPIKDRERVDRFLRALKALGIKKVLR-AELRVRPPDSPRGMNGSGMLIINPPWTLDEELEEILP 226 (245)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHH-SSE-EE-EEEE---SS---S--EEEEEEES--TTHHHHHHHHHH
T ss_pred EEEEeecccHHHHHHHHHHHHhcCCCCeEE-EEEEecCCCCcCceecceEEEEcCCccHHHHHHHHHH
Confidence 3456699999999999999886432 100 111 22334568888876444 3 77766665554
No 81
>cd03000 PDI_a_TMX3 PDIa family, TMX3 subfamily; composed of eukaryotic proteins similar to human TMX3, a TRX related transmembrane protein containing one redox active TRX domain at the N-terminus and a classical ER retrieval sequence for type I transmembrane proteins at the C-terminus. The TMX3 transcript is found in a variety of tissues with the highest levels detected in skeletal muscle and the heart. In vitro, TMX3 showed oxidase activity albeit slightly lower than that of protein disulfide isomerase.
Probab=22.73 E-value=31 Score=27.96 Aligned_cols=12 Identities=33% Similarity=1.107 Sum_probs=9.4
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
+||+-|......
T Consensus 25 ~wC~~C~~~~p~ 36 (104)
T cd03000 25 PWCGHCKKLEPV 36 (104)
T ss_pred CCCHHHHhhChH
Confidence 899999766643
No 82
>cd03008 TryX_like_RdCVF Tryparedoxin (TryX)-like family, Rod-derived cone viability factor (RdCVF) subfamily; RdCVF is a thioredoxin (TRX)-like protein specifically expressed in photoreceptors. RdCVF was isolated and identified as a factor that supports cone survival in retinal cultures. Cone photoreceptor loss is responsible for the visual handicap resulting from the inherited disease, retinitis pigmentosa. RdCVF shows 33% similarity to TRX but does not exhibit any detectable thiol oxidoreductase activity.
Probab=22.37 E-value=32 Score=31.03 Aligned_cols=11 Identities=9% Similarity=-0.046 Sum_probs=8.8
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
+|||.|..+.-
T Consensus 35 sWCppCr~e~P 45 (146)
T cd03008 35 VVSPQCQLFAP 45 (146)
T ss_pred CCChhHHHHHH
Confidence 89999976653
No 83
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional
Probab=22.34 E-value=3e+02 Score=25.02 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=39.0
Q ss_pred eeEEEEeCCCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCCCcCCc
Q 016264 249 GFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGAR 328 (392)
Q Consensus 249 ~FVVrY~~~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh~Hegl 328 (392)
.+++.|.|+....-..|++.-++-+-+. |.+.+.= +. -.|...+|.++.+++...|.-.
T Consensus 109 ~~~~~~~pg~~~~~~~~h~~~E~~~Vl~-------G~~~~~~-~~-------------~~~~l~~Gd~~~~~~~~~H~~~ 167 (185)
T PRK09943 109 MIFETYQPGTTTGERIKHQGEEIGTVLE-------GEIVLTI-NG-------------QDYHLVAGQSYAINTGIPHSFS 167 (185)
T ss_pred EEEEEccCCCCcccccccCCcEEEEEEE-------eEEEEEE-CC-------------EEEEecCCCEEEEcCCCCeeee
Confidence 3466888877544345666655554442 3333321 10 1245789999999999999877
Q ss_pred cCCc
Q 016264 329 ATTS 332 (392)
Q Consensus 329 pVTs 332 (392)
....
T Consensus 168 n~~~ 171 (185)
T PRK09943 168 NTSA 171 (185)
T ss_pred CCCC
Confidence 7543
No 84
>cd03010 TlpA_like_DsbE TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c maturation (Ccm) factor with a redox active CXXC motif. Assembly of cytochrome c requires the ligation of heme to reduced thiols of the apocytochrome. In bacteria, this assembly occurs in the periplasm. The reductase activity of DsbE in the oxidizing environment of the periplasm is crucial in the maturation of cytochrome c.
Probab=22.07 E-value=37 Score=28.28 Aligned_cols=12 Identities=42% Similarity=1.063 Sum_probs=9.0
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|..+...
T Consensus 35 ~~C~~C~~~~~~ 46 (127)
T cd03010 35 SWCAPCREEHPV 46 (127)
T ss_pred CcCHHHHHHHHH
Confidence 799999765543
No 85
>cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif. CDSP32 is a stress-inducible TRX, i.e., it acts as a TRX by reducing protein disulfides and is induced by environmental and oxidative stress conditions. It plays a critical role in plastid defense against oxidative damage, a role related to its function as a physiological electron donor to BAS1, a plastidic 2-cys peroxiredoxin. Plants lacking CDSP32 exhibit decreased photosystem II photochemical efficiencies and chlorophyll retention compared to WT controls, as well as an increased proportion of BAS1 in its overoxidized monomeric form.
Probab=21.66 E-value=35 Score=27.96 Aligned_cols=11 Identities=9% Similarity=0.048 Sum_probs=8.6
Q ss_pred ccccccchhhH
Q 016264 358 SSWCGECFREK 368 (392)
Q Consensus 358 ~~~c~~c~~~~ 368 (392)
+.||+-|....
T Consensus 24 a~wC~~C~~~~ 34 (103)
T cd02985 24 LKHSGPSVKIY 34 (103)
T ss_pred CCCCHhHHHHh
Confidence 48999997554
No 86
>COG0526 TrxA Thiol-disulfide isomerase and thioredoxins [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=21.61 E-value=32 Score=25.84 Aligned_cols=11 Identities=36% Similarity=1.210 Sum_probs=8.9
Q ss_pred cccccccchhh
Q 016264 357 FSSWCGECFRE 367 (392)
Q Consensus 357 f~~~c~~c~~~ 367 (392)
|+.|||-|...
T Consensus 40 ~~~~C~~C~~~ 50 (127)
T COG0526 40 WAPWCPPCRAE 50 (127)
T ss_pred EcCcCHHHHhh
Confidence 57999999655
No 87
>PF08534 Redoxin: Redoxin; InterPro: IPR013740 This redoxin domain is found in peroxiredoxin, thioredoxin and glutaredoxin proteins. Peroxiredoxins (Prxs) constitute a family of thiol peroxidases that reduce hydrogen peroxide, peroxinitrite, and hydroperoxides using a strictly conserved cysteine []. Chloroplast thioredoxin systems in plants regulate the enzymes involved in photosynthetic carbon assimilation []. It is thought that redoxins have a large role to play in anti-oxidant defence. Cadmium-sensitive proteins are also regulated via thioredoxin and glutaredoxin thiol redox systems [].; GO: 0016491 oxidoreductase activity; PDB: 2H30_A 1TP9_A 1Y25_A 1XVQ_A 2B1K_A 2G0F_A 2B1L_B 3K8N_A 1Z5Y_E 3OR5_A ....
Probab=21.17 E-value=55 Score=27.84 Aligned_cols=24 Identities=29% Similarity=0.796 Sum_probs=16.1
Q ss_pred CccceeeEeeechhhhHHHHHhhhhccccccccchhhHH
Q 016264 331 TSGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECFREKK 369 (392)
Q Consensus 331 TsG~RynLV~W~rss~~R~~~~y~~~f~~~c~~c~~~~~ 369 (392)
..|...+++.|.- .|||.|..+-.
T Consensus 26 ~~gk~~vv~f~~~---------------~~Cp~C~~~~p 49 (146)
T PF08534_consen 26 FKGKPVVVNFWAS---------------AWCPPCRKELP 49 (146)
T ss_dssp GTTSEEEEEEEST---------------TTSHHHHHHHH
T ss_pred hCCCeEEEEEEcc---------------CCCCcchhhhh
Confidence 5566666666642 49999976654
No 88
>cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains. Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia.
Probab=21.07 E-value=36 Score=26.81 Aligned_cols=11 Identities=45% Similarity=1.277 Sum_probs=8.6
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|...+.
T Consensus 26 ~wC~~C~~~~p 36 (102)
T cd03005 26 PWCGHCKRLAP 36 (102)
T ss_pred CCCHHHHHhCH
Confidence 79999976544
No 89
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=20.14 E-value=43 Score=25.52 Aligned_cols=18 Identities=28% Similarity=0.582 Sum_probs=12.9
Q ss_pred ccccccchhhHHHHHHHH
Q 016264 358 SSWCGECFREKKERQRLS 375 (392)
Q Consensus 358 ~~~c~~c~~~~~~~~~~~ 375 (392)
..|||.|.+-+..-+...
T Consensus 6 ~~~Cp~C~~~~~~L~~~~ 23 (84)
T TIGR02180 6 KSYCPYCKKAKEILAKLN 23 (84)
T ss_pred CCCChhHHHHHHHHHHcC
Confidence 489999988777644433
No 90
>PF02311 AraC_binding: AraC-like ligand binding domain; InterPro: IPR003313 This entry defines the arabinose-binding and dimerisation domain of the bacterial gene regulatory protein AraC. The crystal structure of the arabinose-binding and dimerization domain of the Escherichia coli gene regulatory protein AraC was determined in the presence and absence of L-arabinose. The arabinose-bound molecule shows that the protein adopts an unusual fold, binding sugar within a beta barrel and completely burying the arabinose with the amino-terminal arm of the protein. Dimer contacts in the presence of arabinose are mediated by an antiparallel coiled-coil. In the uncomplexed protein, the amino-terminal arm is disordered, uncovering the sugar-binding pocket and allowing it to serve as an oligomerization interface [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 1XJA_B 2ARA_A 2AAC_B 2ARC_A.
Probab=20.04 E-value=2.5e+02 Score=22.51 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=20.7
Q ss_pred ecCCCceEEEecCCCCcCCccCCc-cceeeEeee
Q 016264 309 YSHVPGRAVLHRGRHRHGARATTS-GHRVNLLLW 341 (392)
Q Consensus 309 y~~~~G~AllHpGrh~HeglpVTs-G~RynLV~W 341 (392)
|...+|..++.+....|...+... +.++..|.+
T Consensus 43 ~~l~~g~~~li~p~~~H~~~~~~~~~~~~~~i~~ 76 (136)
T PF02311_consen 43 YPLKPGDLFLIPPGQPHSYYPDSNEPWEYYWIYF 76 (136)
T ss_dssp EEE-TT-EEEE-TTS-EEEEE-TTSEEEEEEEEE
T ss_pred EEEECCEEEEecCCccEEEecCCCCCEEEEEEEE
Confidence 356889999999999999888776 455555555
Done!