Query 016264
Match_columns 392
No_of_seqs 208 out of 313
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 10:40:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dkq_A PKHD-type hydroxylase S 99.7 2.9E-17 9.8E-22 156.2 10.6 163 164-349 19-199 (243)
2 2jig_A Prolyl-4 hydroxylase; h 99.7 4.7E-17 1.6E-21 150.4 10.4 174 163-348 19-221 (224)
3 3itq_A Prolyl 4-hydroxylase, a 99.7 6.6E-17 2.3E-21 151.1 11.0 156 163-347 38-215 (216)
4 2hbt_A EGL nine homolog 1; pro 99.2 1.9E-10 6.5E-15 108.9 14.7 169 164-351 26-220 (247)
5 3kt7_A PKHD-type hydroxylase T 98.0 6.8E-05 2.3E-09 79.6 14.6 198 136-346 13-230 (633)
6 2rdq_A 1-deoxypentalenic acid 97.6 0.0012 4E-08 61.7 14.4 87 259-345 134-253 (288)
7 2rg4_A Uncharacterized protein 97.6 0.00059 2E-08 63.1 11.8 93 248-342 104-205 (216)
8 2a1x_A Phytanoyl-COA dioxygena 97.5 0.00099 3.4E-08 63.2 13.2 84 262-345 142-255 (308)
9 2opw_A Phyhd1 protein; double- 97.3 0.0037 1.3E-07 58.5 13.9 89 256-344 147-266 (291)
10 2fct_A Syringomycin biosynthes 97.2 0.0067 2.3E-07 57.4 14.3 42 305-346 218-262 (313)
11 3gja_A CYTC3; halogenase, beta 96.9 0.0062 2.1E-07 58.9 11.6 41 305-345 220-263 (319)
12 3emr_A ECTD; double stranded b 96.7 0.0075 2.6E-07 58.2 10.2 175 165-345 47-269 (310)
13 3nnf_A CURA; non-HAEM Fe(II)/a 95.1 0.062 2.1E-06 53.1 8.7 171 165-342 41-272 (344)
14 2iuw_A Alkylated repair protei 94.7 0.11 3.8E-06 48.5 9.0 160 164-341 40-227 (238)
15 3s57_A Alpha-ketoglutarate-dep 94.6 0.2 6.9E-06 45.8 10.2 158 165-340 12-199 (204)
16 3tht_A Alkylated DNA repair pr 94.5 0.088 3E-06 52.2 8.1 144 159-331 106-274 (345)
17 3i3q_A Alpha-ketoglutarate-dep 88.8 1.2 4.2E-05 41.0 8.0 80 248-341 106-200 (211)
18 3pl0_A Uncharacterized protein 86.9 0.49 1.7E-05 45.1 4.2 76 261-346 162-249 (254)
19 1gp6_A Leucoanthocyanidin diox 82.4 2.5 8.6E-05 41.4 7.0 79 251-345 214-308 (356)
20 1w9y_A 1-aminocyclopropane-1-c 81.7 2.8 9.5E-05 40.5 7.0 80 251-345 159-254 (319)
21 3on7_A Oxidoreductase, iron/as 81.0 2.5 8.4E-05 40.0 6.2 80 251-345 154-255 (280)
22 1dcs_A Deacetoxycephalosporin 79.1 2.8 9.6E-05 40.2 6.0 81 251-345 161-268 (311)
23 3oox_A Putative 2OG-Fe(II) oxy 78.0 3.2 0.00011 39.7 6.1 80 251-345 173-272 (312)
24 1odm_A Isopenicillin N synthas 75.8 3.3 0.00011 40.0 5.5 70 259-345 208-289 (331)
25 3rcq_A Aspartyl/asparaginyl be 73.1 4.2 0.00015 37.3 5.2 78 249-342 104-181 (197)
26 1r26_A Thioredoxin; redox-acti 70.2 1.7 5.8E-05 35.3 1.6 50 321-370 3-58 (125)
27 1ilo_A Conserved hypothetical 45.4 6.5 0.00022 28.0 0.9 13 357-369 7-19 (77)
28 1oih_A Putative alkylsulfatase 38.7 72 0.0025 29.6 7.2 32 259-290 102-139 (301)
29 1nho_A Probable thioredoxin; b 38.0 9.8 0.00034 27.3 0.9 13 358-370 10-22 (85)
30 2ozj_A Cupin 2, conserved barr 37.3 83 0.0028 24.3 6.4 34 309-343 78-111 (114)
31 1fo5_A Thioredoxin; disulfide 34.8 11 0.00039 27.0 0.8 12 358-369 11-22 (85)
32 3die_A Thioredoxin, TRX; elect 33.5 11 0.00039 28.0 0.6 11 359-369 29-39 (106)
33 2vim_A Thioredoxin, TRX; thior 33.5 11 0.00038 28.0 0.5 11 359-369 29-39 (104)
34 2voc_A Thioredoxin; electron t 32.9 16 0.00054 28.2 1.4 12 359-370 27-38 (112)
35 3kp8_A Vkorc1/thioredoxin doma 31.1 13 0.00043 29.6 0.5 13 357-369 20-32 (106)
36 4i4a_A Similar to unknown prot 30.6 1E+02 0.0035 24.1 6.0 40 309-348 74-113 (128)
37 2djj_A PDI, protein disulfide- 30.4 15 0.0005 28.4 0.8 12 359-370 35-46 (121)
38 2pu9_C TRX-F, thioredoxin F-ty 30.3 13 0.00046 28.3 0.5 13 358-370 33-45 (111)
39 3uvt_A Thioredoxin domain-cont 30.2 13 0.00046 27.9 0.5 12 358-369 30-41 (111)
40 3d6i_A Monothiol glutaredoxin- 29.9 15 0.0005 28.0 0.7 12 358-369 30-41 (112)
41 1mek_A Protein disulfide isome 29.9 15 0.00051 27.8 0.8 12 359-370 34-45 (120)
42 1faa_A Thioredoxin F; electron 29.6 14 0.00047 28.8 0.5 12 359-370 47-58 (124)
43 3m9j_A Thioredoxin; oxidoreduc 29.4 14 0.00048 27.5 0.5 11 359-369 30-40 (105)
44 3tco_A Thioredoxin (TRXA-1); d 29.4 19 0.00066 26.8 1.3 12 358-369 30-41 (109)
45 2e0q_A Thioredoxin; electron t 29.2 14 0.00049 27.1 0.5 11 359-369 26-36 (104)
46 1nx8_A CARC, carbapenem syntha 28.9 25 0.00086 32.1 2.3 32 260-291 96-135 (273)
47 1nsw_A Thioredoxin, TRX; therm 28.7 15 0.00051 27.5 0.5 12 359-370 27-38 (105)
48 1fb6_A Thioredoxin M; electron 28.2 24 0.00084 26.1 1.7 12 359-370 28-39 (105)
49 1ep7_A Thioredoxin CH1, H-type 28.1 15 0.00052 27.8 0.5 13 358-370 33-45 (112)
50 2kuc_A Putative disulphide-iso 28.1 16 0.00056 28.6 0.7 12 358-369 36-47 (130)
51 3f3q_A Thioredoxin-1; His TAG, 27.9 15 0.00053 28.2 0.5 11 359-369 34-44 (109)
52 2dml_A Protein disulfide-isome 27.8 19 0.00066 28.1 1.1 12 359-370 45-56 (130)
53 1thx_A Thioredoxin, thioredoxi 27.7 17 0.00059 27.4 0.8 11 359-369 35-45 (115)
54 2xc2_A Thioredoxinn; oxidoredu 27.6 16 0.00054 28.2 0.5 13 358-370 42-54 (117)
55 2yzu_A Thioredoxin; redox prot 27.6 16 0.00054 27.2 0.5 11 359-369 28-38 (109)
56 1dby_A Chloroplast thioredoxin 27.6 16 0.00054 27.4 0.5 12 359-370 29-40 (107)
57 1t00_A Thioredoxin, TRX; redox 27.4 16 0.00055 27.7 0.5 11 359-369 33-43 (112)
58 1xwb_A Thioredoxin; dimerizati 27.2 16 0.00056 27.1 0.5 12 358-369 29-40 (106)
59 1gh2_A Thioredoxin-like protei 26.9 17 0.00057 27.6 0.5 12 358-369 30-41 (107)
60 2trx_A Thioredoxin; electron t 26.9 29 0.00098 26.0 1.9 12 359-370 30-41 (108)
61 1zzo_A RV1677; thioredoxin fol 26.7 17 0.00057 28.0 0.5 11 359-369 35-45 (136)
62 2i4a_A Thioredoxin; acidophIle 26.7 29 0.001 25.7 1.9 12 359-370 30-41 (107)
63 2l6c_A Thioredoxin; oxidoreduc 26.6 19 0.00064 27.8 0.8 11 359-369 29-39 (110)
64 2k8s_A Thioredoxin; dimer, str 26.5 16 0.00054 26.8 0.4 12 358-369 9-20 (80)
65 1syr_A Thioredoxin; SGPP, stru 26.5 17 0.00058 27.9 0.5 12 359-370 36-47 (112)
66 1zma_A Bacterocin transport ac 26.4 17 0.00058 28.2 0.5 12 358-369 38-49 (118)
67 4euy_A Uncharacterized protein 26.4 23 0.00079 26.8 1.3 11 359-369 28-38 (105)
68 1x5e_A Thioredoxin domain cont 25.8 18 0.00061 28.3 0.5 12 359-370 32-43 (126)
69 3gnj_A Thioredoxin domain prot 25.8 18 0.00061 27.2 0.5 11 359-369 32-42 (111)
70 2lja_A Putative thiol-disulfid 25.7 23 0.00079 28.2 1.2 11 359-369 40-50 (152)
71 3aps_A DNAJ homolog subfamily 25.4 29 0.00099 26.8 1.7 12 359-370 31-42 (122)
72 1lu4_A Soluble secreted antige 25.4 18 0.00063 28.0 0.5 11 359-369 34-44 (136)
73 3ul3_B Thioredoxin, thioredoxi 25.3 18 0.00063 28.6 0.5 12 359-370 52-63 (128)
74 1otj_A Alpha-ketoglutarate-dep 25.2 2.1E+02 0.0073 26.0 7.9 42 249-290 82-130 (283)
75 3hxs_A Thioredoxin, TRXP; elec 25.2 20 0.00069 28.5 0.8 11 359-369 61-71 (141)
76 3qfa_C Thioredoxin; protein-pr 25.1 19 0.00064 28.2 0.5 12 358-369 40-51 (116)
77 2j23_A Thioredoxin; immune pro 25.0 21 0.00071 28.0 0.8 11 359-369 43-53 (121)
78 1w4v_A Thioredoxin, mitochondr 25.0 19 0.00064 28.1 0.5 11 359-369 41-51 (119)
79 3fk8_A Disulphide isomerase; A 24.7 19 0.00065 28.4 0.5 13 358-370 38-50 (133)
80 2f51_A Thioredoxin; electron t 24.6 19 0.00066 28.2 0.5 12 358-369 32-43 (118)
81 3hcz_A Possible thiol-disulfid 24.6 22 0.00076 27.9 0.9 11 359-369 41-51 (148)
82 2yj7_A LPBCA thioredoxin; oxid 30.4 16 0.00054 26.9 0.0 11 359-369 29-39 (106)
83 2oe3_A Thioredoxin-3; electron 24.5 19 0.00065 28.2 0.5 12 359-370 40-51 (114)
84 3fkf_A Thiol-disulfide oxidore 24.4 24 0.00081 27.8 1.0 11 359-369 43-53 (148)
85 2dj3_A Protein disulfide-isome 24.4 21 0.00072 28.0 0.7 12 359-370 35-46 (133)
86 2l57_A Uncharacterized protein 24.3 20 0.00068 28.1 0.5 11 359-369 36-46 (126)
87 1x5d_A Protein disulfide-isome 24.2 34 0.0012 26.6 1.9 12 359-370 35-46 (133)
88 2fwh_A Thiol:disulfide interch 24.1 20 0.00068 28.8 0.5 11 358-368 40-50 (134)
89 2e7p_A Glutaredoxin; thioredox 24.1 19 0.00064 27.8 0.4 11 359-369 28-38 (116)
90 3or5_A Thiol:disulfide interch 24.1 20 0.00068 29.0 0.5 12 359-370 44-55 (165)
91 3erw_A Sporulation thiol-disul 24.0 20 0.00069 28.0 0.5 11 359-369 44-54 (145)
92 1xfl_A Thioredoxin H1; AT3G510 23.9 20 0.00069 28.5 0.5 14 357-370 46-59 (124)
93 2l5l_A Thioredoxin; structural 23.9 20 0.00069 28.7 0.5 12 359-370 48-59 (136)
94 3dml_A Putative uncharacterize 23.9 30 0.001 28.7 1.6 30 323-368 8-37 (116)
95 1ti3_A Thioredoxin H, PTTRXH1; 23.8 21 0.0007 27.0 0.5 12 358-369 35-46 (113)
96 1kng_A Thiol:disulfide interch 23.8 20 0.00069 28.6 0.5 11 359-369 52-62 (156)
97 4evm_A Thioredoxin family prot 23.6 21 0.00072 27.2 0.6 11 359-369 32-42 (138)
98 2vlu_A Thioredoxin, thioredoxi 23.4 21 0.00072 27.6 0.5 12 358-369 43-54 (122)
99 2vm1_A Thioredoxin, thioredoxi 23.3 21 0.00073 27.1 0.5 12 358-369 37-48 (118)
100 3h79_A Thioredoxin-like protei 23.2 21 0.00073 28.1 0.5 12 359-370 43-54 (127)
101 1wmj_A Thioredoxin H-type; str 23.2 21 0.00073 27.7 0.5 13 358-370 45-57 (130)
102 1xvw_A Hypothetical protein RV 23.1 36 0.0012 27.6 1.9 22 332-367 34-55 (160)
103 2b5x_A YKUV protein, TRXY; thi 23.0 22 0.00074 27.9 0.5 10 359-368 39-48 (148)
104 2dj0_A Thioredoxin-related tra 22.7 25 0.00085 28.1 0.9 13 358-370 35-47 (137)
105 2dj1_A Protein disulfide-isome 22.6 22 0.00075 28.2 0.5 12 359-370 44-55 (140)
106 3hz4_A Thioredoxin; NYSGXRC, P 22.3 35 0.0012 27.5 1.7 11 359-369 34-44 (140)
107 3raz_A Thioredoxin-related pro 22.1 23 0.00079 28.5 0.5 11 359-369 34-44 (151)
108 3d22_A TRXH4, thioredoxin H-ty 21.8 24 0.00081 28.1 0.5 13 358-370 55-67 (139)
109 3ewl_A Uncharacterized conserv 21.8 20 0.00069 28.3 0.1 10 359-368 37-46 (142)
110 2i1u_A Thioredoxin, TRX, MPT46 21.7 24 0.00082 27.0 0.5 12 359-370 40-51 (121)
111 1i5g_A Tryparedoxin II; electr 21.7 24 0.00081 28.1 0.5 11 359-369 38-48 (144)
112 2ju5_A Thioredoxin disulfide i 21.7 24 0.00081 29.3 0.5 13 358-370 57-69 (154)
113 1yhf_A Hypothetical protein SP 21.2 1.6E+02 0.0053 22.5 5.3 31 310-341 81-111 (115)
114 3emx_A Thioredoxin; structural 21.0 33 0.0011 27.5 1.3 11 358-368 40-50 (135)
115 2dbn_A Hypothetical protein YB 20.8 94 0.0032 32.0 4.8 45 310-370 370-414 (461)
116 3eur_A Uncharacterized protein 20.7 26 0.00088 27.9 0.6 11 359-369 41-51 (142)
117 3ha9_A Uncharacterized thiored 20.6 28 0.00096 28.4 0.8 10 359-368 47-56 (165)
118 3cxg_A Putative thioredoxin; m 20.6 25 0.00086 28.3 0.5 12 358-369 49-60 (133)
119 2h30_A Thioredoxin, peptide me 20.5 26 0.0009 28.3 0.6 11 359-369 48-58 (164)
120 4g2e_A Peroxiredoxin; redox pr 20.4 35 0.0012 28.3 1.4 9 359-367 41-49 (157)
121 2opk_A Hypothetical protein; p 20.3 2.4E+02 0.0082 22.1 6.3 33 309-341 75-109 (112)
122 3gix_A Thioredoxin-like protei 20.3 35 0.0012 28.3 1.3 13 358-370 32-44 (149)
123 2lus_A Thioredoxion; CR-Trp16, 25.5 22 0.00075 28.0 0.0 11 359-369 36-46 (143)
No 1
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.70 E-value=2.9e-17 Score=156.19 Aligned_cols=163 Identities=17% Similarity=0.305 Sum_probs=110.1
Q ss_pred CcEEEec-CCCHHHHHHHHHHHHhhhhhhhcccc-cccccCCCCcccccccccChH-HHHHHHHHHHhhhhhhhhccccc
Q 016264 164 PGVFTFE-MLQPRFCELLLAEVENFEKWVNEAKF-RIMRPNTMNKYGAVLDDFGLE-TMLDKLMETYIRPLSKVFFAEVG 240 (392)
Q Consensus 164 P~Vy~fp-vftpefC~~LIeE~E~fg~Ws~gs~~-~i~rPn~mN~YgvvLddiGl~-~~~~~Ll~~yl~Pl~~~LfPe~~ 240 (392)
+.++.+| |||+++|++||+.++.- .|..+... ...-....||..+..++. +. .+++.+.. .+.. . |.+.
T Consensus 19 ~~i~~i~dvLs~~Ec~~li~~~e~~-~~~dg~~t~g~~~~~vr~n~~l~~d~~-~~~~l~~~i~~-~l~~---~--~~f~ 90 (243)
T 3dkq_A 19 GMLIEIPNVFSKQEVSHLREQLDAR-RWIDGNQTSGAMATTRKRNQQLDKDDP-VAVALGQQIMD-RLLA---H--PQFV 90 (243)
T ss_dssp TTBEEECCSSCHHHHHHHHHHHHTS-CCEEECCCSSBSSCCCEEEEECCTTCH-HHHHHHHHHHH-HHHT---C--HHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHhhC-CCccCcccCCCccccceeeeEECCCCH-HHHHHHHHHHH-HHcc---C--cchh
Confidence 5777775 99999999999999852 45432211 111123344544444443 32 33333332 2221 0 0111
Q ss_pred CCCCc--ccceeEEEEeCCCCCCCcccccCC-----------ceeEEEeccc--cccCcceEEccccccccccCCCCccc
Q 016264 241 GSTLD--SHHGFVVEYGKDRDVDLGFHVDDS-----------EVTLNVCLGK--QFTGGELFFRGTRCEKHVNTGSQTEE 305 (392)
Q Consensus 241 g~~Ld--sh~~FVVrY~~~~d~~L~~H~D~S-----------evTLNI~Ln~--dFeGGgl~F~~~~c~~hv~~~~~~~e 305 (392)
..+|. .....+.+|.+++ .+++|+|.+ .+|+.++||+ +|+||+|.|.....
T Consensus 91 ~~~L~~~~e~~~~~rY~~G~--~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~------------ 156 (243)
T 3dkq_A 91 SAALPLQFYPPLFNRYQGGE--TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG------------ 156 (243)
T ss_dssp HHHCEEEEEEEEEEEECTTC--EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE------------
T ss_pred hcccccccccceEEEECCCC--eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC------------
Confidence 11111 1234479999976 999999963 5899999998 99999999996432
Q ss_pred eeeecCCCceEEEecCCCCcCCccCCccceeeEeeechhhhHHH
Q 016264 306 IFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFRE 349 (392)
Q Consensus 306 ~~~y~~~~G~AllHpGrh~HeglpVTsG~RynLV~W~rss~~R~ 349 (392)
...++|++|.+|+|++..+|+|.|||+|+||+++.|++|. +|+
T Consensus 157 ~~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~Wi~s~-vr~ 199 (243)
T 3dkq_A 157 QQSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQSM-VRD 199 (243)
T ss_dssp EEEECCCTTCEEEEETTSEEEECCEEEECEEEEEEEEEES-CCC
T ss_pred cEEEecCCCEEEEECCCCeEcCccccccCEEEEEEehhhc-cCC
Confidence 1346899999999999999999999999999999999976 444
No 2
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=99.69 E-value=4.7e-17 Score=150.38 Aligned_cols=174 Identities=15% Similarity=0.212 Sum_probs=110.0
Q ss_pred CCcEEEec-CCCHHHHHHHHHHHHh-hhh--hhhcccccccccCCCCcccccccccChHHHHHHHHHHHhhhhhhhhccc
Q 016264 163 SPGVFTFE-MLQPRFCELLLAEVEN-FEK--WVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAE 238 (392)
Q Consensus 163 ~P~Vy~fp-vftpefC~~LIeE~E~-fg~--Ws~gs~~~i~rPn~mN~YgvvLddiGl~~~~~~Ll~~yl~Pl~~~LfPe 238 (392)
.|.|+.++ |||+++|+.||+.++. +.. |..+..-.....+.++...+.+++- -+.....+. +.|..++. +|
T Consensus 19 ~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~-~~~~~~~i~-~ri~~~~g--l~- 93 (224)
T 2jig_A 19 SPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKG-EDSVISKIE-KRVAQVTM--IP- 93 (224)
T ss_dssp TTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTT-CSHHHHHHH-HHHHHHHT--CC-
T ss_pred CCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCC-CCHHHHHHH-HHHHHHhC--CC-
Confidence 58899885 9999999999999985 221 2111100001122344444445431 112222222 22332211 11
Q ss_pred ccCCCCcccceeEEEEeCCCCCCCcccccCC--------------ceeEEEeccccccCcceEEcccccccc--ccCCCC
Q 016264 239 VGGSTLDSHHGFVVEYGKDRDVDLGFHVDDS--------------EVTLNVCLGKQFTGGELFFRGTRCEKH--VNTGSQ 302 (392)
Q Consensus 239 ~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S--------------evTLNI~Ln~dFeGGgl~F~~~~c~~h--v~~~~~ 302 (392)
+ .... ..-|++|.+++ .+.+|+|.. .+|+.|+||+..+||+|.|........ .-++.
T Consensus 94 ~---~~~e-~~qv~rY~~G~--~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c- 166 (224)
T 2jig_A 94 L---ENHE-GLQVLHYHDGQ--KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSEC- 166 (224)
T ss_dssp G---GGBC-CCEEEEEETTC--CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTT-
T ss_pred c---cccc-ceEEEecCCCc--cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCccccccccccccc-
Confidence 0 1111 23378999976 899999952 389999999999999999986530000 00000
Q ss_pred ccceeeecCCCceEEEecC---------CCCcCCccCCccceeeEeeechhhhHH
Q 016264 303 TEEIFDYSHVPGRAVLHRG---------RHRHGARATTSGHRVNLLLWCRSSVFR 348 (392)
Q Consensus 303 ~~e~~~y~~~~G~AllHpG---------rh~HeglpVTsG~RynLV~W~rss~~R 348 (392)
.+..+.+.|++|.||+|+. +.+|+|.||++|+||++..|+++..||
T Consensus 167 ~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~~ 221 (224)
T 2jig_A 167 AKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIG 221 (224)
T ss_dssp GGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCCC
T ss_pred ccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCcC
Confidence 0123578999999999986 799999999999999999999987765
No 3
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=99.69 E-value=6.6e-17 Score=151.05 Aligned_cols=156 Identities=21% Similarity=0.278 Sum_probs=106.6
Q ss_pred CCcEEEec-CCCHHHHHHHHHHHHh-hhhhhhcccccccccCCCCcccccccccChHHHHHHHHHHHhhhhhhhhccccc
Q 016264 163 SPGVFTFE-MLQPRFCELLLAEVEN-FEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVG 240 (392)
Q Consensus 163 ~P~Vy~fp-vftpefC~~LIeE~E~-fg~Ws~gs~~~i~rPn~mN~YgvvLddiGl~~~~~~Ll~~yl~Pl~~~LfPe~~ 240 (392)
.|.|+.++ |||+++|+.||+..+. +....-+.+ ......++..++-|++ +.....+. +.|..++-. | ..
T Consensus 38 ~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~--~~~~~~RtS~~~wl~~---~~~v~~i~-~Ri~~~~gl--~-~~ 108 (216)
T 3itq_A 38 EPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS--RDVNDIRTSSGAFLDD---NELTAKIE-KRISSIMNV--P-AS 108 (216)
T ss_dssp TTTEEEEESCSCHHHHHHHHHHHHHHHC----------CCCCGGGTTCEECCC---CHHHHHHH-HHHHHHHTS--C-GG
T ss_pred CCCEEEECCcCCHHHHHHHHHHhhcccccceeccC--CccCCcEeeeeEEeCC---cHHHHHHH-HHHHHhcCc--e-ec
Confidence 69999996 9999999999999885 433110011 0112223334555665 22222222 223322211 1 00
Q ss_pred CCCCcccceeEEEEeCCCCCCCcccccCC-----------ceeEEEeccccccCcceEEccccccccccCCCCccceeee
Q 016264 241 GSTLDSHHGFVVEYGKDRDVDLGFHVDDS-----------EVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDY 309 (392)
Q Consensus 241 g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S-----------evTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y 309 (392)
..-...+++|.+++ .+.+|+|.. .+|+.++||+.++||+|.|..... .+
T Consensus 109 ----~~E~lqv~~Y~~G~--~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~--------------~V 168 (216)
T 3itq_A 109 ----HGEGLHILNYEVDQ--QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLNL--------------SV 168 (216)
T ss_dssp ----GBCCCEEEEECBTC--CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTTE--------------EE
T ss_pred ----cccceeEEEeCCCC--ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCCC--------------EE
Confidence 11123479999976 899999954 289999999999999999987542 34
Q ss_pred cCCCceEEEecC---------CCCcCCccCCccceeeEeeechhhhH
Q 016264 310 SHVPGRAVLHRG---------RHRHGARATTSGHRVNLLLWCRSSVF 347 (392)
Q Consensus 310 ~~~~G~AllHpG---------rh~HeglpVTsG~RynLV~W~rss~~ 347 (392)
.|++|.||+|+. +.+|+|.||++|+||++..|++...|
T Consensus 169 ~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~~ 215 (216)
T 3itq_A 169 HPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTY 215 (216)
T ss_dssp CCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSCC
T ss_pred ecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCCc
Confidence 799999999998 79999999999999999999997654
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.20 E-value=1.9e-10 Score=108.94 Aligned_cols=169 Identities=18% Similarity=0.223 Sum_probs=104.6
Q ss_pred CcEEEec-CCCHHHHHHHHHHHHhhh---hhhhccccccccc------CCCCccccccccc--ChHH--HHHHHHHHHhh
Q 016264 164 PGVFTFE-MLQPRFCELLLAEVENFE---KWVNEAKFRIMRP------NTMNKYGAVLDDF--GLET--MLDKLMETYIR 229 (392)
Q Consensus 164 P~Vy~fp-vftpefC~~LIeE~E~fg---~Ws~gs~~~i~rP------n~mN~YgvvLddi--Gl~~--~~~~Ll~~yl~ 229 (392)
++++.++ +|++++|+.|+++++... .+.. ..+.+. ...+..-.-++.- ..+. .+...++..+.
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~---a~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~ 102 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTD---GQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIR 102 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCS---CCEEECCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccc---cccccccccccccccccceeeecccccchhHHHHHHHHHHHHHH
Confidence 5777775 999999999999999742 1111 111111 0111111112221 1221 13333443333
Q ss_pred hhhhhhcccccCCCCc-ccceeEEEEeCCCCCCCcccccCC-----ceeEEEecccc----ccCcceEEccccccccccC
Q 016264 230 PLSKVFFAEVGGSTLD-SHHGFVVEYGKDRDVDLGFHVDDS-----EVTLNVCLGKQ----FTGGELFFRGTRCEKHVNT 299 (392)
Q Consensus 230 Pl~~~LfPe~~g~~Ld-sh~~FVVrY~~~~d~~L~~H~D~S-----evTLNI~Ln~d----FeGGgl~F~~~~c~~hv~~ 299 (392)
-+... .+...++ ....-+.+|.+ .+.++.+|.|.. .+|+.++||++ +.||+|.|.....
T Consensus 103 ~ln~~----lGl~~i~~~~e~~~~~Y~~-~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~------ 171 (247)
T 2hbt_A 103 HCNGK----LGSYKINGRTKAMVACYPG-NGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK------ 171 (247)
T ss_dssp HTTTT----STTCCEEEECCEEEEEECS-SSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTC------
T ss_pred HHhhh----cCcccccccceEEEEEecC-CCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCC------
Confidence 22211 1111111 11233689986 234999999973 59999999985 4599999875321
Q ss_pred CCCccceeeecCCCceEEEecCC--CCcCCccCCccceeeEeeechhhhHHHHH
Q 016264 300 GSQTEEIFDYSHVPGRAVLHRGR--HRHGARATTSGHRVNLLLWCRSSVFREMK 351 (392)
Q Consensus 300 ~~~~~e~~~y~~~~G~AllHpGr--h~HeglpVTsG~RynLV~W~rss~~R~~~ 351 (392)
+....+.|+.|.+|+|... ..|+++| +.|+||.+..|++....|+..
T Consensus 172 ----~~~~~v~P~~grlv~F~s~~~~~H~V~p-~~~~R~sit~W~~~~~~~~~a 220 (247)
T 2hbt_A 172 ----AQFADIEPKFDRLLFFWSDRRNPHEVQP-AYATRYAITVWYFDADERARA 220 (247)
T ss_dssp ----SSCEEECCBTTEEEEEECSTTCCEEECC-BSSCEEEEEEEEEEHHHHHHH
T ss_pred ----CceEEEEcCCCEEEEEecCCCceeeecc-CCCEEEEEEEEEcCCchhhhh
Confidence 1235678999999999986 7999999 679999999999999887643
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=98.00 E-value=6.8e-05 Score=79.56 Aligned_cols=198 Identities=16% Similarity=0.146 Sum_probs=124.0
Q ss_pred cccCCchhHHHhhhccHhhhhccccccCCcEEEecCCCHHHHHHHHHHHHhhhhhhhcccccc---cccCCC-Ccccccc
Q 016264 136 GNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRI---MRPNTM-NKYGAVL 211 (392)
Q Consensus 136 e~~l~p~f~~ai~~~~~~~~~~i~~ep~P~Vy~fpvftpefC~~LIeE~E~fg~Ws~gs~~~i---~rPn~m-N~YgvvL 211 (392)
..++++.|.+.++... .-..|.|-+..=.+|++++-+.+.+|+..--.|.. ...++ ...... |.-+..-
T Consensus 13 ~~~~~~~~~~~lk~~y------~~s~PFpH~VIdnfl~d~lle~V~~Efp~~i~f~~-KetDlYk~~QsgdLanl~~l~~ 85 (633)
T 3kt7_A 13 PKIWDKTFQDGLKKEI------EDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTK-KETDIYRVNQSGDLANLSGLDW 85 (633)
T ss_dssp GGGGCHHHHHHHHHHH------HTCSSSCCEEESSCBCHHHHHHHHHHHHHHCCCEE-EECSSEEEEECCCTTCTTSCCT
T ss_pred hhhcCHHHHHHHHhhh------hcCCCcceEEECCCCCHHHHHHHHHHhhhccCccc-ccccccceeccccccccccCCh
Confidence 3477888888777642 23678998888899999999999999874223321 11111 111111 1111222
Q ss_pred cccChHHHHHHHHHHHhhhhhhhhcccccCC-CCc--ccceeEEEEeCCCCCCCcccccCC---ceeEEEeccc-c----
Q 016264 212 DDFGLETMLDKLMETYIRPLSKVFFAEVGGS-TLD--SHHGFVVEYGKDRDVDLGFHVDDS---EVTLNVCLGK-Q---- 280 (392)
Q Consensus 212 ddiGl~~~~~~Ll~~yl~Pl~~~LfPe~~g~-~Ld--sh~~FVVrY~~~~d~~L~~H~D~S---evTLNI~Ln~-d---- 280 (392)
+++..-.-|..|++...++-.+.++-.+.|. .|. ....-+.+|.++. ++..|.|.. .+|+.++||+ +
T Consensus 86 e~l~~lp~l~~Lr~~L~S~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~--fL~~H~D~~~~RrvS~VLYLN~pd~~W~ 163 (633)
T 3kt7_A 86 DDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGC--HLLTHDDVIGSRRISFILYLPDPDRKWK 163 (633)
T ss_dssp TCCTTCHHHHHHHHHHTSHHHHHHHHHHHTCCCCCSSCCCEEEEEECTTC--EEEEECCCCTTEEEEEEEECSCTTSCCC
T ss_pred hhhccChHHHHHHHHHhcHHHHHHHHHHhCCcccCCCceeEEEEEeCCCC--eeeecCCCCCCeEEEEEEEcCCCCCCCC
Confidence 2333334455555544444433344333332 331 1233357898766 999999964 4999999997 4
Q ss_pred -ccCcceEEccccccccccCCCCccceeeecCCCceEEEecC---CCCcCCccCC-ccceeeEeeechhhh
Q 016264 281 -FTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRG---RHRHGARATT-SGHRVNLLLWCRSSV 346 (392)
Q Consensus 281 -FeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpG---rh~HeglpVT-sG~RynLV~W~rss~ 346 (392)
..||+|.+........ ...+....+.|.-|+.++|.- ...|++.+|+ ...|+.+.+|++...
T Consensus 164 ~e~GGeL~Lyd~d~~~~----P~~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 164 SHYGGGLRLFPSILPNV----PHSDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp GGGBCCEEECCEEETTE----ECSSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEEECCC
T ss_pred ccCCceEEEecCCCcCC----CCCCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEeccCC
Confidence 5699999986532100 001234567899999999984 5999999998 566999999999774
No 6
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.59 E-value=0.0012 Score=61.73 Aligned_cols=87 Identities=17% Similarity=0.154 Sum_probs=59.4
Q ss_pred CCCCcccccCC-------ceeEEEeccc-cccCcceEEcccccc----cc----------------cc-CCCCccceeee
Q 016264 259 DVDLGFHVDDS-------EVTLNVCLGK-QFTGGELFFRGTRCE----KH----------------VN-TGSQTEEIFDY 309 (392)
Q Consensus 259 d~~L~~H~D~S-------evTLNI~Ln~-dFeGGgl~F~~~~c~----~h----------------v~-~~~~~~e~~~y 309 (392)
+....+|.|.. .+|+.|+|.+ .=+.|.|.|....-. .+ +. ...........
T Consensus 134 g~~~~wHqD~~~~~~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 213 (288)
T 2rdq_A 134 HYLTPFHQDGFYIGPNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHS 213 (288)
T ss_dssp TTSCCSBCHHHHSCSCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECC
T ss_pred CCCcCccccccccCCCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccCceeec
Confidence 45789999953 5789999975 456677877532100 00 00 00011233566
Q ss_pred cCCCceEEEecCCCCcCCccCCcc----ceeeEeeechhh
Q 016264 310 SHVPGRAVLHRGRHRHGARATTSG----HRVNLLLWCRSS 345 (392)
Q Consensus 310 ~~~~G~AllHpGrh~HeglpVTsG----~RynLV~W~rss 345 (392)
..++|.+|+|.++.+|++.+-++. .|+.++.|....
T Consensus 214 ~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 214 PMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp CCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred ccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecC
Confidence 789999999999999999998876 378999988765
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=97.56 E-value=0.00059 Score=63.07 Aligned_cols=93 Identities=12% Similarity=0.097 Sum_probs=67.7
Q ss_pred ceeEEEEeCCCCCCCccccc-CCceeEEEeccccccCcceEEcccccccc-----ccCCCC--ccceeeecCCCceEEEe
Q 016264 248 HGFVVEYGKDRDVDLGFHVD-DSEVTLNVCLGKQFTGGELFFRGTRCEKH-----VNTGSQ--TEEIFDYSHVPGRAVLH 319 (392)
Q Consensus 248 ~~FVVrY~~~~d~~L~~H~D-~SevTLNI~Ln~dFeGGgl~F~~~~c~~h-----v~~~~~--~~e~~~y~~~~G~AllH 319 (392)
...++.|.++. ....|.| ++.+|..++|+..=.||+|.|...+.... ...+.. ......+.|++|..|||
T Consensus 104 ~~W~~~~~~G~--~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 104 DIWINILPEGG--VHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEECTTC--CEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eEEEEEcCCCC--cccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 46688998866 8899999 47899999998666799999986532100 000000 02234679999999999
Q ss_pred cCCCCcCCccCCc-cceeeEeeec
Q 016264 320 RGRHRHGARATTS-GHRVNLLLWC 342 (392)
Q Consensus 320 pGrh~HeglpVTs-G~RynLV~W~ 342 (392)
|+...|++.|..+ +.|+.+-.-+
T Consensus 182 pS~l~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 182 ESWLRHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp ETTSCEEECCCCSSSCEEEEEEEE
T ss_pred CCCCEEeccCCCCCCCEEEEEEEe
Confidence 9999999999886 6788765443
No 8
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.53 E-value=0.00099 Score=63.16 Aligned_cols=84 Identities=15% Similarity=0.133 Sum_probs=55.5
Q ss_pred CcccccCC---------ceeEEEeccc-cccCcceEEccccccc----c---------------ccCCCCccceeeecCC
Q 016264 262 LGFHVDDS---------EVTLNVCLGK-QFTGGELFFRGTRCEK----H---------------VNTGSQTEEIFDYSHV 312 (392)
Q Consensus 262 L~~H~D~S---------evTLNI~Ln~-dFeGGgl~F~~~~c~~----h---------------v~~~~~~~e~~~y~~~ 312 (392)
..+|.|.+ .+|+.|+|.+ .=++|.|.|....-.. + +..............+
T Consensus 142 ~~wHqD~~~~~~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 221 (308)
T 2a1x_A 142 HPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVME 221 (308)
T ss_dssp -CCBCGGGGCCEECGGGEEEEEEESSCBCTTBTCEEECTTGGGSCCCCCCC-----------CCCCC-CCCSCCEEECBC
T ss_pred CCCccCCccccCCCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCccccccccccccCccccccCCccccccCCeEEccCC
Confidence 68999954 3788889975 4567778876421100 0 0000011345667889
Q ss_pred CceEEEecCCCCcCCccCCc-cceeeEeeechhh
Q 016264 313 PGRAVLHRGRHRHGARATTS-GHRVNLLLWCRSS 345 (392)
Q Consensus 313 ~G~AllHpGrh~HeglpVTs-G~RynLV~W~rss 345 (392)
+|.+++|.++.+|++.+-++ ..|.++++.....
T Consensus 222 aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~ 255 (308)
T 2a1x_A 222 KGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASA 255 (308)
T ss_dssp TTCEEEECTTCCEEECCBCSSSCEEEEEEEEEET
T ss_pred CccEEEECCCccccCCCCCCCCceEEEEEEEECC
Confidence 99999999999999999765 5688887755543
No 9
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=97.31 E-value=0.0037 Score=58.50 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=58.2
Q ss_pred CCCCCCCcccccCC---------ceeEEEeccc-cccCcceEEccccccccc-----cC---------------CCCccc
Q 016264 256 KDRDVDLGFHVDDS---------EVTLNVCLGK-QFTGGELFFRGTRCEKHV-----NT---------------GSQTEE 305 (392)
Q Consensus 256 ~~~d~~L~~H~D~S---------evTLNI~Ln~-dFeGGgl~F~~~~c~~hv-----~~---------------~~~~~e 305 (392)
|+.+....+|.|.+ .+|+.|+|.+ .=++|.|.|....-...+ .. ......
T Consensus 147 Pg~~~~~~wHqD~~~~~~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T 2opw_A 147 PHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSL 226 (291)
T ss_dssp TTTBCCEEEECGGGTSCEESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGG
T ss_pred CCCCCCcCCeeCCcccccCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCC
Confidence 55555689999963 4788888975 456778887532100000 00 001134
Q ss_pred eeeecCCCceEEEecCCCCcCCccCCcc-ceeeEeeechh
Q 016264 306 IFDYSHVPGRAVLHRGRHRHGARATTSG-HRVNLLLWCRS 344 (392)
Q Consensus 306 ~~~y~~~~G~AllHpGrh~HeglpVTsG-~RynLV~W~rs 344 (392)
......++|.+|+|.++.+|++.+-++. .|.++++-...
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~ 266 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLME 266 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEE
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEc
Confidence 5667889999999999999999987764 57777654433
No 10
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.17 E-value=0.0067 Score=57.43 Aligned_cols=42 Identities=12% Similarity=0.114 Sum_probs=32.9
Q ss_pred ceeeecCCCceEEEecCCCCcCCccCC--c-cceeeEeeechhhh
Q 016264 305 EIFDYSHVPGRAVLHRGRHRHGARATT--S-GHRVNLLLWCRSSV 346 (392)
Q Consensus 305 e~~~y~~~~G~AllHpGrh~HeglpVT--s-G~RynLV~W~rss~ 346 (392)
+......++|.+++|.++.+|++.+-+ + ..|.++++-..+..
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~R~a~~~~y~~~~ 262 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLMHASYPHSGESQEMRMGFASRYVPSF 262 (313)
T ss_dssp GCEEECBCTTEEEEEETTSEEEECCBCSSSSSCEEEEEEEEEETT
T ss_pred ceeEeeeCCceEEEEeCCceeeCCCCCCCCCCceEEEEEEEECCC
Confidence 455678899999999999999999987 4 45877766555443
No 11
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=96.91 E-value=0.0062 Score=58.92 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=31.0
Q ss_pred ceeeecCCCceEEEecCCCCcCCccCC--ccc-eeeEeeechhh
Q 016264 305 EIFDYSHVPGRAVLHRGRHRHGARATT--SGH-RVNLLLWCRSS 345 (392)
Q Consensus 305 e~~~y~~~~G~AllHpGrh~HeglpVT--sG~-RynLV~W~rss 345 (392)
+.+.+..++|.+|+|.|+.+|++.+-+ +.. |.++++-....
T Consensus 220 ~~v~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R~a~~~~y~~~ 263 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSNTMHASLPHTGSKTDYRMGFAARYVPT 263 (319)
T ss_dssp -CCBCCBCTTEEEEEETTSCEEECCCCSCTTCCEEEEEEEEEET
T ss_pred ceeEeeECCCeEEEEcCCccccCCCCCCCCCCcEEEEEEEEECC
Confidence 455667899999999999999999887 554 77776544433
No 12
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=96.69 E-value=0.0075 Score=58.19 Aligned_cols=175 Identities=14% Similarity=0.218 Sum_probs=88.4
Q ss_pred cEEEe-cCCCHHHHHHHHHHHHhhhhhhh--cccccccccCCCCcccccccccChHHHHHHHH-HHHhhhhhhhhccccc
Q 016264 165 GVFTF-EMLQPRFCELLLAEVENFEKWVN--EAKFRIMRPNTMNKYGAVLDDFGLETMLDKLM-ETYIRPLSKVFFAEVG 240 (392)
Q Consensus 165 ~Vy~f-pvftpefC~~LIeE~E~fg~Ws~--gs~~~i~rPn~mN~YgvvLddiGl~~~~~~Ll-~~yl~Pl~~~LfPe~~ 240 (392)
|...+ .+|+++.|+.|.++++....... +....+..+.. ....-+++-......+..|+ ...|..+++.|+
T Consensus 47 Gyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~f~~l~~~p~l~~i~~~ll---- 121 (310)
T 3emr_A 47 GFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES-NDIRSIFHVHQDDNYFQDVANDKRILDIVRHLL---- 121 (310)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTT-CCEEEEECHHHHCHHHHHHHTCHHHHHHHHHHH----
T ss_pred CEEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCC-cceeEEeehhhccHHHHHHHhChHHHHHHHHHc----
Confidence 66666 49999999999999987644211 11111111111 01011111001112222222 222333333333
Q ss_pred CCCCcccceeEEEEeC-CCCCCCcccccCC------------ceeEEEeccc-cccCcceEEccccccccc----cCC--
Q 016264 241 GSTLDSHHGFVVEYGK-DRDVDLGFHVDDS------------EVTLNVCLGK-QFTGGELFFRGTRCEKHV----NTG-- 300 (392)
Q Consensus 241 g~~Ldsh~~FVVrY~~-~~d~~L~~H~D~S------------evTLNI~Ln~-dFeGGgl~F~~~~c~~hv----~~~-- 300 (392)
|..+.-+.. .+-+.+ +.+....+|.|.+ .+|+.|+|.+ .=+.|.|.|....-...+ +..
T Consensus 122 G~~~~l~~s-~~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~~g~~p~~ 200 (310)
T 3emr_A 122 GSDVYVHQS-RINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPDN 200 (310)
T ss_dssp TSCEEEEEE-EEECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEECCC-----
T ss_pred CCceEEEee-EEEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEeCCCCCccccccccccc
Confidence 221111111 122333 3456789999942 4788889975 346777777532110000 000
Q ss_pred -C----------Cc-----------cc-eeeecCCCceEEEecCCCCcCCccCCcc-ceeeEeeechhh
Q 016264 301 -S----------QT-----------EE-IFDYSHVPGRAVLHRGRHRHGARATTSG-HRVNLLLWCRSS 345 (392)
Q Consensus 301 -~----------~~-----------~e-~~~y~~~~G~AllHpGrh~HeglpVTsG-~RynLV~W~rss 345 (392)
. .+ .. +.....++|.+++|.|+.+|++.+-++. .|.++++-..+.
T Consensus 201 ~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~~~~~H~s~~N~S~~~R~~l~~~y~~~ 269 (310)
T 3emr_A 201 NYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSV 269 (310)
T ss_dssp ------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEETTCCEEECCCCSSCCCCEEEEEEEEG
T ss_pred ccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEeCCceecCCCCCCCCCeEEEEEEEeCC
Confidence 0 00 01 4556779999999999999999887654 476665544433
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=95.14 E-value=0.062 Score=53.13 Aligned_cols=171 Identities=11% Similarity=0.102 Sum_probs=89.0
Q ss_pred cEEEe-cCCCHHHHHHHHHHHHhhhhhhhcccc--cccccCCCCcccc--cccccChHHHHHHHHHHHhhhhhhhhcccc
Q 016264 165 GVFTF-EMLQPRFCELLLAEVENFEKWVNEAKF--RIMRPNTMNKYGA--VLDDFGLETMLDKLMETYIRPLSKVFFAEV 239 (392)
Q Consensus 165 ~Vy~f-pvftpefC~~LIeE~E~fg~Ws~gs~~--~i~rPn~mN~Ygv--vLddiGl~~~~~~Ll~~yl~Pl~~~LfPe~ 239 (392)
|-.++ .||++++-++|.++++...+-...++. .|.-|....-.-+ -.|+++.. ++..+..++...+-+-+
T Consensus 41 GYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h-----~~s~l~~rll~vl~~Ll 115 (344)
T 3nnf_A 41 GYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYD-----FVSSFIQEKLALLNYIT 115 (344)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHH-----HHHHHHGGGHHHHHHHH
T ss_pred ceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHH-----HHHHHHHHHHHHHHHHh
Confidence 55555 499999999999999987542111111 1111111000000 02334432 11222223333333322
Q ss_pred cCCCCcccceeEEEEeCCCCCCCccccc----------CCceeEEEeccc--cccCcceEEcc---------ccc-----
Q 016264 240 GGSTLDSHHGFVVEYGKDRDVDLGFHVD----------DSEVTLNVCLGK--QFTGGELFFRG---------TRC----- 293 (392)
Q Consensus 240 ~g~~Ldsh~~FVVrY~~~~d~~L~~H~D----------~SevTLNI~Ln~--dFeGGgl~F~~---------~~c----- 293 (392)
|..+-.+..-.+.+.|+ ...|.||.| +..+|+-|.|.+ .-++|++.+.. +.-
T Consensus 116 -G~el~i~qs~~fe~kPG-~KGFpWH~D~~~F~~~~~eD~a~S~WIpLd~i~~e~nGGM~~VP~s~~Sgs~~y~~~d~~~ 193 (344)
T 3nnf_A 116 -GKNLMIMHNALFSVEPN-HKGLPWHVGVGSFSFTKTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDLHL 193 (344)
T ss_dssp -TSCEEEEEEEEEEECBT-CCBSCSBCTTTTTTTBCTTSCEEEEEEESSCBCTTTBCSEEEECTTTCCTHHHHHHHHHHH
T ss_pred -CCceeeeecceEeeCCC-CCCCCceecccccccccCCCCeEEEEEECCCCCccCCCceEEecCcccCcceeeecchHHH
Confidence 33332333333667887 789999999 446899999953 23455555432 110
Q ss_pred cccccC---CCCcc------------------------ceeeecCCCceEEEecCCCCcCCccCCcc---ceeeEeeec
Q 016264 294 EKHVNT---GSQTE------------------------EIFDYSHVPGRAVLHRGRHRHGARATTSG---HRVNLLLWC 342 (392)
Q Consensus 294 ~~hv~~---~~~~~------------------------e~~~y~~~~G~AllHpGrh~HeglpVTsG---~RynLV~W~ 342 (392)
...... ...=+ ........||.||+|.+..+|++.|...+ .|-++++-.
T Consensus 194 ~~~Lk~qe~~~sLee~la~~~gi~~~~~~~~i~~~le~~~~ewd~epGDav~F~~~tlHga~plgn~~~~rRRAfS~Rf 272 (344)
T 3nnf_A 194 KNNIKWDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRL 272 (344)
T ss_dssp HHHTTCCGGGCCHHHHHHHCCCHHHHCCHHHHHHHHTTCEEECCBCTTCEEEEETTCEEEECCBCTTSCSCEEEEEEEE
T ss_pred HHHhhccCCcccHHHHHHhhcCcccCccccccchhhhhhhccccCCCCcEEEEecceeecCCCCCCCCccceeEEEEEE
Confidence 000000 00001 11233458999999999999999977664 465665533
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=94.72 E-value=0.11 Score=48.54 Aligned_cols=160 Identities=16% Similarity=0.242 Sum_probs=87.8
Q ss_pred CcEEEec-CCCHHHHHHHHHHHHhhhhhhhcccc----cccccCCCCcccc--------ccccc-ChHHHHHHHHHHHhh
Q 016264 164 PGVFTFE-MLQPRFCELLLAEVENFEKWVNEAKF----RIMRPNTMNKYGA--------VLDDF-GLETMLDKLMETYIR 229 (392)
Q Consensus 164 P~Vy~fp-vftpefC~~LIeE~E~fg~Ws~gs~~----~i~rPn~mN~Ygv--------vLddi-Gl~~~~~~Ll~~yl~ 229 (392)
|+|+.+| +|+++..++|++++.+--.|...... ...-|....-||- ..... ++-..+..|++. +.
T Consensus 40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~~~-~~ 118 (238)
T 2iuw_A 40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNR-IE 118 (238)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEEEEEECCCTTSCHHHHCCBSSCCHHHHHHHHH-HH
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCcccccCCeeEEcCCCccccCCcccCCCCCCCHHHHHHHHH-HH
Confidence 5788886 99999999999999754456432210 0001222222331 01111 333333333321 11
Q ss_pred hhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCC------ceeEEEeccccccCcceEEcccccccccc--CCC
Q 016264 230 PLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDS------EVTLNVCLGKQFTGGELFFRGTRCEKHVN--TGS 301 (392)
Q Consensus 230 Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S------evTLNI~Ln~dFeGGgl~F~~~~c~~hv~--~~~ 301 (392)
.++ +..+| ...|-.|.++ +..+++|.|+. ..-++|+|| +.+.|. .+|..... .+.
T Consensus 119 ----~~~----g~~~n--~~LvN~Y~~G-~d~i~~H~D~~~~~~~~~~IaslSLG-----~~~~f~-f~~~~~~~~~~~~ 181 (238)
T 2iuw_A 119 ----ENT----GHTFN--SLLCNLYRNE-KDSVDWHSDDEPSLGRCPIIASLSFG-----ATRTFE-MRKKPPPEENGDY 181 (238)
T ss_dssp ----HHH----SCCCC--EEEEEEECST-TCCEEEECCCCGGGCSSCCEEEEEEE-----SCEEEE-EEECCC-------
T ss_pred ----HHh----CCCCC--EEEEEEECCC-CCceeCCcCChhhcCCCCcEEEEECC-----CCEEEE-EeccCCccccCcc
Confidence 122 22334 4556678765 24899999974 245566663 344443 22211000 000
Q ss_pred CccceeeecCCCceEEEecCC----CCcCCccCC--ccceeeEeee
Q 016264 302 QTEEIFDYSHVPGRAVLHRGR----HRHGARATT--SGHRVNLLLW 341 (392)
Q Consensus 302 ~~~e~~~y~~~~G~AllHpGr----h~HeglpVT--sG~RynLV~W 341 (392)
.....+.+....|..++-.|. ..|+..++. .|.|.||..-
T Consensus 182 ~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR 227 (238)
T 2iuw_A 182 TYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFR 227 (238)
T ss_dssp -CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEE
T ss_pred cCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEee
Confidence 012456778899999999998 579988874 8899999753
No 15
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=94.57 E-value=0.2 Score=45.75 Aligned_cols=158 Identities=16% Similarity=0.210 Sum_probs=87.0
Q ss_pred cEEEecCCCHHHHHHHHHHHHhhhhhhhc--cccc-----ccccCCCCcccc----------cccccChHHHHHHHHHHH
Q 016264 165 GVFTFEMLQPRFCELLLAEVENFEKWVNE--AKFR-----IMRPNTMNKYGA----------VLDDFGLETMLDKLMETY 227 (392)
Q Consensus 165 ~Vy~fpvftpefC~~LIeE~E~fg~Ws~g--s~~~-----i~rPn~mN~Ygv----------vLddiGl~~~~~~Ll~~y 227 (392)
.+|...+|+++.++.|++++.+--.|..+ ..+. +.-|....=||- .+.-.++-.++..+++.
T Consensus 12 ~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp~~L~~l~~~- 90 (204)
T 3s57_A 12 DSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDH- 90 (204)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEECCEECCHHHHHHHHH-
T ss_pred eEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcccCCCCCHHHHHHHHH-
Confidence 46666799999999999999875567321 1111 111222121221 12223333455554432
Q ss_pred hhhhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCC-c-----eeEEEeccccccCcceEEccccccccc-cCC
Q 016264 228 IRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDS-E-----VTLNVCLGKQFTGGELFFRGTRCEKHV-NTG 300 (392)
Q Consensus 228 l~Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S-e-----vTLNI~Ln~dFeGGgl~F~~~~c~~hv-~~~ 300 (392)
+. .++ +..+| ...|-.|.++. ..+++|.|+. + .-++|+|| +...|. .+|...- ...
T Consensus 91 ~~----~~~----g~~~n--~~LvN~Y~~G~-d~i~~H~D~~~~~~~~~~IasvSLG-----~~~~f~-~~~~~~~~~~~ 153 (204)
T 3s57_A 91 VS----GVT----GQTFN--FVLINRYKDGS-DHICEHRDDERELAPGSPIASVSFG-----ASRDFV-FRHKDSRGKSP 153 (204)
T ss_dssp HH----HHH----CCCCS--EEEEEEESSTT-CCEEEECCCCTTBCTTCCEEEEEEE-----SCEEEE-EEEGGGCSSSC
T ss_pred HH----HHh----CCCCc--eeEEEEECCCC-CcccceecChhhccCCCcEEEEECC-----CceEEE-EEEcCCCcccc
Confidence 11 112 23334 45677898754 3799999983 2 44566664 334443 2221100 000
Q ss_pred CCccceeeecCCCceEEEecCC----CCcCCccCC--ccceeeEee
Q 016264 301 SQTEEIFDYSHVPGRAVLHRGR----HRHGARATT--SGHRVNLLL 340 (392)
Q Consensus 301 ~~~~e~~~y~~~~G~AllHpGr----h~HeglpVT--sG~RynLV~ 340 (392)
........+....|..++-.|. +.|+..++. .|.|.||..
T Consensus 154 ~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 154 SRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp SCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEE
T ss_pred ccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEe
Confidence 1112346678899999999998 568776665 388999864
No 16
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=94.49 E-value=0.088 Score=52.16 Aligned_cols=144 Identities=16% Similarity=0.330 Sum_probs=74.4
Q ss_pred ccccCCcEEEec-CCCHHHHHHHHHHHHhhhhhhhccc-c---cccccCCCCccccccc------c------cChHHHHH
Q 016264 159 ISEPSPGVFTFE-MLQPRFCELLLAEVENFEKWVNEAK-F---RIMRPNTMNKYGAVLD------D------FGLETMLD 221 (392)
Q Consensus 159 ~~ep~P~Vy~fp-vftpefC~~LIeE~E~fg~Ws~gs~-~---~i~rPn~mN~YgvvLd------d------iGl~~~~~ 221 (392)
+....|||+.+| ++++++.+.|++++. |..... + ....++....||..++ + .++-.++.
T Consensus 106 ~~~lp~Gl~~~p~fis~~Ee~~Ll~~i~----w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~ 181 (345)
T 3tht_A 106 PQALPPGLMVVEEIISSEEEKMLLESVD----WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICE 181 (345)
T ss_dssp CCSCCTTEEEETTCSCHHHHHHHHTTCC--------------------CEEECCC------------------CCCHHHH
T ss_pred cccCCCceEEEcCcCCHHHHHHHHHhcc----cCCccccccCcccccCceEEEECCcccccccccccCCCCCcCcCHHHH
Confidence 344567899997 999999999998775 432110 0 1122333445553211 0 12223334
Q ss_pred HHHHHHhhhhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCCc----eeEEEeccccccCcceEEccccccccc
Q 016264 222 KLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE----VTLNVCLGKQFTGGELFFRGTRCEKHV 297 (392)
Q Consensus 222 ~Ll~~yl~Pl~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~Se----vTLNI~Ln~dFeGGgl~F~~~~c~~hv 297 (392)
.|++.... .++.+..+| ...|-.|.++. .+++|.|+.. .-+.|+|+ +...|. .++..
T Consensus 182 ~l~~r~~~-------~~~~~~~~n--~~lvN~Y~~G~--~I~~H~D~~~~~~~~I~slSLG-----~~~~f~-f~~~~-- 242 (345)
T 3tht_A 182 SFLEKWLR-------KGYIKHKPD--QMTINQYEPGQ--GIPAHIDTHSAFEDEIVSLSLG-----SEIVMD-FKHPD-- 242 (345)
T ss_dssp HHHHHHHH-------HTSCSSCCS--EEEEEEECTTC--CEEEECCCTTTBCSCEEEEEES-----SCEEEE-EECTT--
T ss_pred HHHHHHHh-------cccCCCCCC--EEEEEEecCCC--CEeeccCCchhcCCeEEEEECC-----CceeEE-EccCC--
Confidence 44432211 122223333 45678899875 9999999852 34455554 223332 11110
Q ss_pred cCCCCccceeeecCCCceEEEecCC----CCcCCccCC
Q 016264 298 NTGSQTEEIFDYSHVPGRAVLHRGR----HRHGARATT 331 (392)
Q Consensus 298 ~~~~~~~e~~~y~~~~G~AllHpGr----h~HeglpVT 331 (392)
.....+....|..++-.|. +.|+..++.
T Consensus 243 ------~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~ 274 (345)
T 3tht_A 243 ------GIAVPVMLPRRSLLVMTGESRYLWTHGITCRK 274 (345)
T ss_dssp ------SCEEEEEECTTEEEEECTHHHHTSEEEECCCS
T ss_pred ------CceEEEEcCCCcEEEEChHHhhceEccCCccc
Confidence 1234567888999999886 447665554
No 17
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=88.81 E-value=1.2 Score=40.99 Aligned_cols=80 Identities=23% Similarity=0.316 Sum_probs=52.9
Q ss_pred ceeEEEEeCCCCCCCcccccCCc-----eeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC
Q 016264 248 HGFVVEYGKDRDVDLGFHVDDSE-----VTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR 322 (392)
Q Consensus 248 ~~FVVrY~~~~d~~L~~H~D~Se-----vTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr 322 (392)
...|-.|.++. .+++|.|..+ .-++|+|| +.+.|. .++.. ..+....+....|..++-.|.
T Consensus 106 ~~LvN~Y~~G~--~i~~H~D~~e~~~~~pI~svSLG-----~~~~f~-f~~~~------~~~~~~~i~L~~GsllvM~G~ 171 (211)
T 3i3q_A 106 ACLINRYAPGA--KLSLHQDKDEPDLRAPIVSVSLG-----LPAIFQ-FGGLK------RNDPLKRLLLEHGDVVVWGGE 171 (211)
T ss_dssp EEEEEEECTTC--CEEEECCCCCSCTTSCEEEEEEE-----SCEEEE-ECCSS------TTSCCEEEEECTTCEEEECGG
T ss_pred EEEEEEEcCCC--CcccccCCCccccCCCEEEEECC-----CCeEEE-Eeccc------CCCceEEEECCCCCEEEECch
Confidence 45677899876 9999999422 23455553 334443 22211 112345677899999999887
Q ss_pred ---CCcCCccCCc-------cceeeEeee
Q 016264 323 ---HRHGARATTS-------GHRVNLLLW 341 (392)
Q Consensus 323 ---h~HeglpVTs-------G~RynLV~W 341 (392)
+.|+..++.. |.|.||..-
T Consensus 172 ~r~~~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 172 SRLFYHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp GTTCCEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred HHceEeccCcccCCcCCCCCCCEEEEEee
Confidence 7899888886 459998753
No 18
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=86.92 E-value=0.49 Score=45.08 Aligned_cols=76 Identities=22% Similarity=0.251 Sum_probs=57.8
Q ss_pred CCcccccCCceeEEEecc-ccccCcceEEccccccccccCCCCccceeeec-CCCceEEEecCC-CCcCCccCCc-----
Q 016264 261 DLGFHVDDSEVTLNVCLG-KQFTGGELFFRGTRCEKHVNTGSQTEEIFDYS-HVPGRAVLHRGR-HRHGARATTS----- 332 (392)
Q Consensus 261 ~L~~H~D~SevTLNI~Ln-~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~-~~~G~AllHpGr-h~HeglpVTs----- 332 (392)
-=+.|.|..++++.+.++ ..-+||+++....... ...... ..+|.+++.--+ .+|++.||.+
T Consensus 162 PEGiHrDG~d~v~v~lv~R~Ni~GGet~I~~~~~~----------~~~~~~l~~p~d~llv~D~~~~H~vTpI~~~~~~~ 231 (254)
T 3pl0_A 162 PEGAHRDGVDFVAVVFIGRQGVRGGETRVFDAAGP----------QGVRFTLEQPWTVLLLDDQQVIHESTPLLPLDPAD 231 (254)
T ss_dssp TTCSBCCSSSEEEEEEEEEESEEECCEEEEETTSS----------EEEEECCCSTTCEEEEETTTEEEEECCEEESCTTC
T ss_pred CcccccCCCCEEEEEEecCCccccceEEEEcCCCC----------ccceeEecCCCcEEEEeCCcccCCCCccccCCCCC
Confidence 457999999999999997 4688999998764321 122222 488888888755 8999999874
Q ss_pred ----cceeeEeeechhhh
Q 016264 333 ----GHRVNLLLWCRSSV 346 (392)
Q Consensus 333 ----G~RynLV~W~rss~ 346 (392)
|.|-+||+-++.-.
T Consensus 232 ~~~~g~RDvlVvtf~~~~ 249 (254)
T 3pl0_A 232 PAVPAHRDTLVLTYRSGG 249 (254)
T ss_dssp TTSCCEEEEEEEEEESSS
T ss_pred CCCceEEEEEEEEecCCc
Confidence 88999999887643
No 19
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=82.35 E-value=2.5 Score=41.36 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=59.9
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+- ....+++|+|-+.+||... ++ -|||.... ..+++.+.+.+|..||.-|.
T Consensus 214 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~l~~ 277 (356)
T 1gp6_A 214 INYYPKCPQPELALGVEAHTDVSALTFILH--NM--VPGLQLFY------------EGKWVTAKCVPDSIVMHIGDTLEI 277 (356)
T ss_dssp EEEECCCSSTTTCCSEEEECCCSSEEEEEE--CS--CCCEEEEE------------TTEEEECCCCTTCEEEEECHHHHH
T ss_pred eeecCCCCCcccccCcCCccCCCeEEEEEE--cC--CCCeEEec------------CCcEEECcCCCCeEEEEeccHHHH
Confidence 4678653 3446889999999999765 32 36677652 13678889999999999884
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
..|.+..-....||.+..|+.-.
T Consensus 278 ~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 278 LSNGKYKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp HTTTSSCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred hcCCEeeccCceecCCCCCCEEEEEEeecCC
Confidence 57888766667899999999865
No 20
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=81.65 E-value=2.8 Score=40.48 Aligned_cols=80 Identities=19% Similarity=0.172 Sum_probs=59.7
Q ss_pred EEEEeCCC----CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGKDR----DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~~~----d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+-. ...+++|+|-+.+||... ++ +-|||.... ..+++.+.+.+|..||.-|.
T Consensus 159 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d~-~v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~l~~ 223 (319)
T 1w9y_A 159 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQ--DD-KVSGLQLLK------------DGQWIDVPPMRHSIVVNLGDQLEV 223 (319)
T ss_dssp EEECCCCSCGGGGSSCCCBCCSSSEEEEEE--SS-SCCCEEEEE------------TTEEEECCCCTTCEEEEECHHHHH
T ss_pred EEecCCCcccccccccccccCCCceEEEEe--cC-CCCeeeEee------------CCeEEEcccCCCcEEEEhHHHHHH
Confidence 46776532 346899999999999864 21 236677642 13678889999999999885
Q ss_pred --------CCcCCccCCccceeeEeeechhh
Q 016264 323 --------HRHGARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVTsG~RynLV~W~rss 345 (392)
..|.+..-..+.||.+..|+.-.
T Consensus 224 ~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~ 254 (319)
T 1w9y_A 224 ITNGKYKSVMHRVIAQKDGARMSLASFYNPG 254 (319)
T ss_dssp HTTTSSCCCCEEECCCSSSCCEEEEEEEECC
T ss_pred HhCCeeecccceecCCCCCCceEEEEEecCC
Confidence 57888776678899999999754
No 21
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=80.96 E-value=2.5 Score=40.04 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=57.7
Q ss_pred EEEEeCCC------CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC--
Q 016264 251 VVEYGKDR------DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR-- 322 (392)
Q Consensus 251 VVrY~~~~------d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr-- 322 (392)
+.+|-+-. ...+++|+|-+.+||... + +-|||..... ..+++.+.+.+|..||.-|.
T Consensus 154 ~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q--d--~~~GLqV~~~-----------~g~W~~V~p~pg~~vVNiGD~l 218 (280)
T 3on7_A 154 ILHYPPMTGDEEMGAIRAAAHEDINLITVLPT--A--NEPGLQVKAK-----------DGSWLDVPSDFGNIIINIGDML 218 (280)
T ss_dssp EEEECCCCTTCCCCSEEEEEECCCSSEEEEEC--C--SCCCEEEECT-----------TSCEEECCCCTTCEEEEECHHH
T ss_pred EEECCCCCCccccCcccccCCCCCCeEEEEEe--c--CCCCeEEEcC-----------CCCEEECcCCCCEEEEEcChHH
Confidence 47787532 234789999999998864 2 2367776531 24678889999999999886
Q ss_pred ----------CCcCCccCC----ccceeeEeeechhh
Q 016264 323 ----------HRHGARATT----SGHRVNLLLWCRSS 345 (392)
Q Consensus 323 ----------h~HeglpVT----sG~RynLV~W~rss 345 (392)
..|.+..-. ...||.+..|+.-.
T Consensus 219 ~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~ 255 (280)
T 3on7_A 219 QEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPH 255 (280)
T ss_dssp HHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCC
T ss_pred HHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCC
Confidence 468865432 45799999999855
No 22
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=79.14 E-value=2.8 Score=40.19 Aligned_cols=81 Identities=20% Similarity=0.162 Sum_probs=56.7
Q ss_pred EEEEeCCC--------CCCCcccccCCceeEEEeccccccCcc--eEEccccccccccCCCCccceeeecCCCceEEEec
Q 016264 251 VVEYGKDR--------DVDLGFHVDDSEVTLNVCLGKQFTGGE--LFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR 320 (392)
Q Consensus 251 VVrY~~~~--------d~~L~~H~D~SevTLNI~Ln~dFeGGg--l~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHp 320 (392)
+.+|-+-. +..+++|+|-+.+||...=+ + .||+ |.... . .+++.+.+.+|..||.-
T Consensus 161 l~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~-~-v~G~~~LqV~~-~-----------g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 161 FRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTP-C-ANGFVSLQAEV-G-----------GAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp EEEECC-----------CCEEEEEECSSEEEEEEEC-C-TTCCCCEEEEE-T-----------TEEEECCCCTTCEEEEE
T ss_pred eecCCCCCcccccCccccccccccCCCeEEEEecCC-C-CCCceeEEEEe-C-----------CEEEeCcCCCCeEEEEH
Confidence 46776522 33489999999999987621 2 2332 76653 1 35788899999999998
Q ss_pred CC------------CCcCCccCC-----ccceeeEeeechhh
Q 016264 321 GR------------HRHGARATT-----SGHRVNLLLWCRSS 345 (392)
Q Consensus 321 Gr------------h~HeglpVT-----sG~RynLV~W~rss 345 (392)
|. ..|.+..-. ...||.+..|+.-+
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~ 268 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPN 268 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCC
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCC
Confidence 85 578887655 55799999999855
No 23
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=77.98 E-value=3.2 Score=39.66 Aligned_cols=80 Identities=19% Similarity=0.199 Sum_probs=56.6
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016264 251 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 322 (392)
Q Consensus 251 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr---- 322 (392)
+.+|-+- .+..+++|+|-+.+||... ++ -|||..... ..+++.+.+.+|..||.-|.
T Consensus 173 ~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q--d~--v~GLqV~~~-----------~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 173 LLHYPPIPKDATGVRAGAHGDINTITLLLG--AE--EGGLEVLDR-----------DGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp EEEECCCSSCCC--CEEEECCCSSEEEEEC--CT--TSCEEEECT-----------TSCEEECCCCSSCEEEEECHHHHH
T ss_pred eEecCCCCCCcCCcCccceecCceEEEEeE--cC--cCceEEECC-----------CCcEEECCCCCCeEEEEhHHHHHH
Confidence 4678762 2356789999999999854 32 466776421 13678889999999999886
Q ss_pred --------CCcCCccCC----ccceeeEeeechhh
Q 016264 323 --------HRHGARATT----SGHRVNLLLWCRSS 345 (392)
Q Consensus 323 --------h~HeglpVT----sG~RynLV~W~rss 345 (392)
..|.+.... ...||.+..|+.-.
T Consensus 238 ~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~ 272 (312)
T 3oox_A 238 LTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFA 272 (312)
T ss_dssp HTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCC
T ss_pred HhCCeecCCCceEeCCCccCCCCCEEEEEEEecCC
Confidence 468875432 34599999999854
No 24
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=75.85 E-value=3.3 Score=39.99 Aligned_cols=70 Identities=14% Similarity=0.127 Sum_probs=53.2
Q ss_pred CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC------------CCcC
Q 016264 259 DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR------------HRHG 326 (392)
Q Consensus 259 d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGr------------h~He 326 (392)
...+++|+|-+.+||... ++ -|||.... +.. ++.+.+.+|..||.-|. ..|.
T Consensus 208 ~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~-----------~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HR 271 (331)
T 1odm_A 208 KLSFEWHEDVSLITVLYQ--SN--VQNLQVET-----------AAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHR 271 (331)
T ss_dssp EEEEEEECCSSSEEEEEE--CS--SCCEEEEE-----------TTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEE
T ss_pred ccccccccCCCeEEEEee--CC--CCCEEEEc-----------CCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCce
Confidence 345889999999999876 22 46777652 124 77889999999999885 5788
Q ss_pred CccCCccceeeEeeechhh
Q 016264 327 ARATTSGHRVNLLLWCRSS 345 (392)
Q Consensus 327 glpVTsG~RynLV~W~rss 345 (392)
+.. ....||.+..|+.-.
T Consensus 272 Vv~-~~~~R~Sia~F~~P~ 289 (331)
T 1odm_A 272 VKW-VNAERQSLPFFVNLG 289 (331)
T ss_dssp EEC-CCSCEEEEEEEECCC
T ss_pred eCC-CCCCEEEEEEEEcCC
Confidence 863 356799999999855
No 25
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=73.13 E-value=4.2 Score=37.25 Aligned_cols=78 Identities=12% Similarity=0.065 Sum_probs=53.6
Q ss_pred eeEEEEeCCCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCCCcCCc
Q 016264 249 GFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGAR 328 (392)
Q Consensus 249 ~FVVrY~~~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~y~~~~G~AllHpGrh~Hegl 328 (392)
+++.+-.|+. .+.+|+|-+-..+.+-|+=.--.++|+|.=.+ -.+.-+.|.+++|-....|++-
T Consensus 104 a~fs~L~pG~--~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~--------------~~~~w~eGe~~~fDds~~Hev~ 167 (197)
T 3rcq_A 104 IKYSIMHPGT--HVWPHTGPTNCRLRMHLGLVIPKEGCKIRCAN--------------ETKTWEEGKVLIFDDSFEHEVW 167 (197)
T ss_dssp EEEEEECTTE--EEEEECCSCTTEEEEEEEEECCSSSEEEEETT--------------EEECCCBTCEEEECTTSCEEEE
T ss_pred EEEEEeCCCC--CcCCeeCCCCCeEEEEEEEEeCCCCcEEEECC--------------EEEEeeCCcEEEEcCCeEEEEE
Confidence 4445666754 99999997765555555311000345554111 1235789999999999999999
Q ss_pred cCCccceeeEeeec
Q 016264 329 ATTSGHRVNLLLWC 342 (392)
Q Consensus 329 pVTsG~RynLV~W~ 342 (392)
--+.+.|++|++=+
T Consensus 168 N~~d~~RvvL~~D~ 181 (197)
T 3rcq_A 168 QDASSFRLIFIVDV 181 (197)
T ss_dssp ECSSSCEEEEEEEE
T ss_pred ECCCCCEEEEEEee
Confidence 99999999998744
No 26
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=70.20 E-value=1.7 Score=35.31 Aligned_cols=50 Identities=22% Similarity=0.353 Sum_probs=28.9
Q ss_pred CCCCcCCccCCccceeeEeeechh-hhHHHHHhhh-----hccccccccchhhHHH
Q 016264 321 GRHRHGARATTSGHRVNLLLWCRS-SVFREMKRYQ-----KDFSSWCGECFREKKE 370 (392)
Q Consensus 321 Grh~HeglpVTsG~RynLV~W~rs-s~~R~~~~y~-----~~f~~~c~~c~~~~~~ 370 (392)
|-|.|++.++-.-.+..||.=+.+ ..|.+.-+-. -=++.||+-|......
T Consensus 3 ~~~~~~~~~~~~~~~~~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~ 58 (125)
T 1r26_A 3 GWHHHHHHGIRMRARYPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERP 58 (125)
T ss_dssp ---------CCCSSCCSCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHH
T ss_pred ccccccccceeeeccccceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHH
Confidence 347888888888888888888887 7776544211 1257899999766554
No 27
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=45.39 E-value=6.5 Score=28.04 Aligned_cols=13 Identities=23% Similarity=0.634 Sum_probs=9.6
Q ss_pred cccccccchhhHH
Q 016264 357 FSSWCGECFREKK 369 (392)
Q Consensus 357 f~~~c~~c~~~~~ 369 (392)
|+.|||-|...+.
T Consensus 7 ~a~wC~~C~~~~~ 19 (77)
T 1ilo_A 7 YGTGCANCQMLEK 19 (77)
T ss_dssp ECSSSSTTHHHHH
T ss_pred EcCCChhHHHHHH
Confidence 5689999965544
No 28
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=38.69 E-value=72 Score=29.64 Aligned_cols=32 Identities=13% Similarity=0.260 Sum_probs=26.2
Q ss_pred CCCCcccccCC------ceeEEEeccccccCcceEEcc
Q 016264 259 DVDLGFHVDDS------EVTLNVCLGKQFTGGELFFRG 290 (392)
Q Consensus 259 d~~L~~H~D~S------evTLNI~Ln~dFeGGgl~F~~ 290 (392)
...+.+|.|.| .+++.-|+.-.=+||+|.|..
T Consensus 102 ~~~~~wHtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 102 QRANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp -CCCSCBCTTTTSSSCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CcCcCCEecccCcCCCCceEEEEEeecCCCCCcccccc
Confidence 45789999998 689999996555899999975
No 29
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=37.96 E-value=9.8 Score=27.33 Aligned_cols=13 Identities=23% Similarity=0.245 Sum_probs=9.9
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.|||-|...+..
T Consensus 10 ~~~C~~C~~~~~~ 22 (85)
T 1nho_A 10 SPTCPYCPMAIEV 22 (85)
T ss_dssp CSSSCCSTTHHHH
T ss_pred CCCCcchHHHHHH
Confidence 5899999766553
No 30
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=37.31 E-value=83 Score=24.27 Aligned_cols=34 Identities=9% Similarity=0.130 Sum_probs=27.1
Q ss_pred ecCCCceEEEecCCCCcCCccCCccceeeEeeech
Q 016264 309 YSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCR 343 (392)
Q Consensus 309 y~~~~G~AllHpGrh~HeglpVTsG~RynLV~W~r 343 (392)
+...+|.+++.+....|..... .+.++.+|++-.
T Consensus 78 ~~l~~Gd~i~i~~~~~H~~~~~-~~~~~~~i~~~~ 111 (114)
T 2ozj_A 78 IDLVPEDVLMVPAHKIHAIAGK-GRFKMLQITLID 111 (114)
T ss_dssp EEECTTCEEEECTTCCBEEEEE-EEEEEEEEEECC
T ss_pred EEecCCCEEEECCCCcEEEEeC-CCcEEEEEEEcc
Confidence 3578999999999999998875 567887777543
No 31
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=34.76 E-value=11 Score=26.97 Aligned_cols=12 Identities=33% Similarity=0.692 Sum_probs=9.3
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.|||-|...+.
T Consensus 11 ~~~C~~C~~~~~ 22 (85)
T 1fo5_A 11 SPMCPHCPAAKR 22 (85)
T ss_dssp CCCSSCCCTHHH
T ss_pred CCCCCchHHHHH
Confidence 489999976654
No 32
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=33.51 E-value=11 Score=28.03 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=8.4
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 29 ~~C~~C~~~~~ 39 (106)
T 3die_A 29 TACGPCKMIAP 39 (106)
T ss_dssp SBCHHHHHHHH
T ss_pred CCCHHHHHHhH
Confidence 89999966543
No 33
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=33.48 E-value=11 Score=28.00 Aligned_cols=11 Identities=36% Similarity=1.117 Sum_probs=8.6
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.|||.|...+.
T Consensus 29 ~~C~~C~~~~~ 39 (104)
T 2vim_A 29 QWCGPCRNIAP 39 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHhhH
Confidence 79999966554
No 34
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=32.93 E-value=16 Score=28.19 Aligned_cols=12 Identities=25% Similarity=0.603 Sum_probs=9.2
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 27 ~wC~~C~~~~~~ 38 (112)
T 2voc_A 27 PWCGPSKMIAPV 38 (112)
T ss_dssp TTBGGGGGHHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999766544
No 35
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=31.15 E-value=13 Score=29.58 Aligned_cols=13 Identities=31% Similarity=0.851 Sum_probs=9.8
Q ss_pred cccccccchhhHH
Q 016264 357 FSSWCGECFREKK 369 (392)
Q Consensus 357 f~~~c~~c~~~~~ 369 (392)
++.|||-|.+.+.
T Consensus 20 ~A~WC~~C~~~~p 32 (106)
T 3kp8_A 20 GAYWCPHCQDQKE 32 (106)
T ss_dssp ECTTCHHHHHHHH
T ss_pred ECCCCHHHHHHHH
Confidence 4689999966544
No 36
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=30.59 E-value=1e+02 Score=24.13 Aligned_cols=40 Identities=8% Similarity=0.086 Sum_probs=26.4
Q ss_pred ecCCCceEEEecCCCCcCCccCCccceeeEeeechhhhHH
Q 016264 309 YSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFR 348 (392)
Q Consensus 309 y~~~~G~AllHpGrh~HeglpVTsG~RynLV~W~rss~~R 348 (392)
+...+|.+++.+....|.........-..+++|+..+.+.
T Consensus 74 ~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f~~~~~~ 113 (128)
T 4i4a_A 74 FPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWWDKESTL 113 (128)
T ss_dssp EEEETTCEEEECTTCCEEEEECSSSCEEEEEEEECHHHHH
T ss_pred EEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEECHHHHH
Confidence 3568899999999999998776544322334455544443
No 37
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=30.43 E-value=15 Score=28.38 Aligned_cols=12 Identities=33% Similarity=1.057 Sum_probs=9.0
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 35 ~wC~~C~~~~p~ 46 (121)
T 2djj_A 35 PWCGHCKALAPK 46 (121)
T ss_dssp SSCTTHHHHHHH
T ss_pred CCCHhHHHhhHH
Confidence 799999665543
No 38
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=30.28 E-value=13 Score=28.31 Aligned_cols=13 Identities=23% Similarity=0.715 Sum_probs=9.5
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.|||.|......
T Consensus 33 a~wC~~C~~~~~~ 45 (111)
T 2pu9_C 33 TQWCGPSKAMAPK 45 (111)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCcCHhHHHHCHH
Confidence 3799999765543
No 39
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=30.21 E-value=13 Score=27.85 Aligned_cols=12 Identities=33% Similarity=1.066 Sum_probs=8.6
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+.|.....
T Consensus 30 ~~~C~~C~~~~~ 41 (111)
T 3uvt_A 30 APWCGHCKTLAP 41 (111)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCCChhHHHhhH
Confidence 389999965443
No 40
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=29.90 E-value=15 Score=28.03 Aligned_cols=12 Identities=33% Similarity=0.739 Sum_probs=7.1
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+.|.....
T Consensus 30 a~wC~~C~~~~~ 41 (112)
T 3d6i_A 30 TSWAEPCKALKQ 41 (112)
T ss_dssp CCC--CHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 389999976554
No 41
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=29.86 E-value=15 Score=27.82 Aligned_cols=12 Identities=42% Similarity=1.124 Sum_probs=9.3
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+.|......
T Consensus 34 ~~C~~C~~~~~~ 45 (120)
T 1mek_A 34 PWCGHCKALAPE 45 (120)
T ss_dssp SSCSTTSTTHHH
T ss_pred CCCHHHHHhhHH
Confidence 799999776544
No 42
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=29.63 E-value=14 Score=28.82 Aligned_cols=12 Identities=33% Similarity=1.049 Sum_probs=9.1
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.|||-|......
T Consensus 47 ~wC~~C~~~~~~ 58 (124)
T 1faa_A 47 QWCGPCKAMAPK 58 (124)
T ss_dssp TTCHHHHHHHHH
T ss_pred CcCHhHHHHhHH
Confidence 799999765544
No 43
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=29.43 E-value=14 Score=27.52 Aligned_cols=11 Identities=45% Similarity=1.201 Sum_probs=8.6
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 30 ~~C~~C~~~~~ 40 (105)
T 3m9j_A 30 TWCGPCKMIKP 40 (105)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhhHHHHH
Confidence 79999966554
No 44
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=29.39 E-value=19 Score=26.76 Aligned_cols=12 Identities=25% Similarity=0.946 Sum_probs=8.9
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+.|.....
T Consensus 30 ~~~C~~C~~~~~ 41 (109)
T 3tco_A 30 AEWCAPCHLYEP 41 (109)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHhhhH
Confidence 389999966553
No 45
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=29.21 E-value=14 Score=27.07 Aligned_cols=11 Identities=27% Similarity=1.005 Sum_probs=8.5
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 26 ~~C~~C~~~~~ 36 (104)
T 2e0q_A 26 EWCAPCLILAP 36 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHhH
Confidence 79999966554
No 46
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=28.88 E-value=25 Score=32.12 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=27.0
Q ss_pred CCCcccccCC------ceeEEEeccccc--cCcceEEccc
Q 016264 260 VDLGFHVDDS------EVTLNVCLGKQF--TGGELFFRGT 291 (392)
Q Consensus 260 ~~L~~H~D~S------evTLNI~Ln~dF--eGGgl~F~~~ 291 (392)
..+.+|.|.| .+++.-|+...= +||++.|...
T Consensus 96 ~~~~~HtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~ 135 (273)
T 1nx8_A 96 GQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDH 135 (273)
T ss_dssp SCEEEECTTTTTTCCCCEEEEEEEEEESCSSSSCEEEEEH
T ss_pred cCCCCcCCCCCccCCCeeEEEEeEeCCCCCCCCcchhhhH
Confidence 4788999998 789999997665 8999999863
No 47
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=28.66 E-value=15 Score=27.49 Aligned_cols=12 Identities=33% Similarity=0.960 Sum_probs=8.9
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 27 ~~C~~C~~~~~~ 38 (105)
T 1nsw_A 27 AWCGPCRMMAPV 38 (105)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999665543
No 48
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=28.18 E-value=24 Score=26.06 Aligned_cols=12 Identities=33% Similarity=0.905 Sum_probs=9.0
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+.|......
T Consensus 28 ~~C~~C~~~~~~ 39 (105)
T 1fb6_A 28 PWCGPCKLIAPV 39 (105)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCChHHHHHHHH
Confidence 799999765543
No 49
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=28.11 E-value=15 Score=27.75 Aligned_cols=13 Identities=31% Similarity=0.882 Sum_probs=9.4
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+.|......
T Consensus 33 ~~~C~~C~~~~~~ 45 (112)
T 1ep7_A 33 ATWCGPCKMIAPL 45 (112)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 3799999765543
No 50
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=28.08 E-value=16 Score=28.56 Aligned_cols=12 Identities=50% Similarity=1.337 Sum_probs=9.0
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+-|.....
T Consensus 36 a~wC~~C~~~~~ 47 (130)
T 2kuc_A 36 TTWCGPCKRLSK 47 (130)
T ss_dssp CTTCTHHHHHHH
T ss_pred CCCCccHHHHHH
Confidence 389999976544
No 51
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=27.94 E-value=15 Score=28.25 Aligned_cols=11 Identities=36% Similarity=1.093 Sum_probs=8.6
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 34 ~wC~~C~~~~p 44 (109)
T 3f3q_A 34 TWCGPCKMIAP 44 (109)
T ss_dssp TTCHHHHHHHH
T ss_pred CcCHhHHHHHH
Confidence 79999966554
No 52
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=27.82 E-value=19 Score=28.10 Aligned_cols=12 Identities=50% Similarity=1.304 Sum_probs=9.3
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 45 ~wC~~C~~~~~~ 56 (130)
T 2dml_A 45 PWCGHCQRLTPE 56 (130)
T ss_dssp TTCSTTGGGHHH
T ss_pred CCCHHHHhhCHH
Confidence 799999776554
No 53
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=27.73 E-value=17 Score=27.40 Aligned_cols=11 Identities=45% Similarity=1.156 Sum_probs=8.4
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 35 ~~C~~C~~~~~ 45 (115)
T 1thx_A 35 SWCGPCQLMSP 45 (115)
T ss_dssp TTCTTHHHHHH
T ss_pred CCCHHHHHhHH
Confidence 79999965544
No 54
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=27.60 E-value=16 Score=28.25 Aligned_cols=13 Identities=31% Similarity=0.920 Sum_probs=9.5
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+-|...+..
T Consensus 42 a~wC~~C~~~~~~ 54 (117)
T 2xc2_A 42 ATWCGPCKTIAPL 54 (117)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCCCHhHHHHhHH
Confidence 4899999765543
No 55
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=27.60 E-value=16 Score=27.16 Aligned_cols=11 Identities=27% Similarity=0.872 Sum_probs=8.5
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 28 ~~C~~C~~~~~ 38 (109)
T 2yzu_A 28 EWCAPCRMIAP 38 (109)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHhhH
Confidence 79999966544
No 56
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=27.58 E-value=16 Score=27.41 Aligned_cols=12 Identities=33% Similarity=0.902 Sum_probs=8.9
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 29 ~~C~~C~~~~~~ 40 (107)
T 1dby_A 29 PWCGPCRIIAPV 40 (107)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHhHHHHHHH
Confidence 799999665443
No 57
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=27.41 E-value=16 Score=27.72 Aligned_cols=11 Identities=36% Similarity=1.180 Sum_probs=8.5
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 33 ~~C~~C~~~~~ 43 (112)
T 1t00_A 33 AWCGPCRQIAP 43 (112)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHhHHhcCH
Confidence 79999966544
No 58
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=27.21 E-value=16 Score=27.12 Aligned_cols=12 Identities=33% Similarity=1.046 Sum_probs=8.9
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+.|.....
T Consensus 29 ~~~C~~C~~~~~ 40 (106)
T 1xwb_A 29 ATWCGPCKMISP 40 (106)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCcCHHHHHhhH
Confidence 479999966544
No 59
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=26.95 E-value=17 Score=27.56 Aligned_cols=12 Identities=33% Similarity=0.736 Sum_probs=9.0
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+-|.....
T Consensus 30 a~wC~~C~~~~~ 41 (107)
T 1gh2_A 30 MRGCGPCLRIAP 41 (107)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCCChhhHHHHH
Confidence 489999966554
No 60
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=26.88 E-value=29 Score=25.96 Aligned_cols=12 Identities=33% Similarity=0.891 Sum_probs=8.9
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+.|......
T Consensus 30 ~~C~~C~~~~~~ 41 (108)
T 2trx_A 30 EWCGPCKMIAPI 41 (108)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHhHHHHHHH
Confidence 799999665543
No 61
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=26.71 E-value=17 Score=28.03 Aligned_cols=11 Identities=36% Similarity=1.057 Sum_probs=8.3
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 35 ~~C~~C~~~~~ 45 (136)
T 1zzo_A 35 PWCPTCQGEAP 45 (136)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999966543
No 62
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=26.68 E-value=29 Score=25.70 Aligned_cols=12 Identities=33% Similarity=0.947 Sum_probs=8.7
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+.|......
T Consensus 30 ~~C~~C~~~~~~ 41 (107)
T 2i4a_A 30 EWCGPCKMIGPA 41 (107)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCChhHHHHhHH
Confidence 799999655443
No 63
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=26.64 E-value=19 Score=27.81 Aligned_cols=11 Identities=27% Similarity=0.649 Sum_probs=8.7
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|...+.
T Consensus 29 ~wC~~C~~~~~ 39 (110)
T 2l6c_A 29 NLCPHCKNMEK 39 (110)
T ss_dssp SSCSTHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 79999976554
No 64
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=26.51 E-value=16 Score=26.81 Aligned_cols=12 Identities=17% Similarity=0.528 Sum_probs=9.3
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.|||-|.+-+.
T Consensus 9 ~~~C~~C~~~~~ 20 (80)
T 2k8s_A 9 HAGCPVCVSAEQ 20 (80)
T ss_dssp ECSCHHHHHHHH
T ss_pred CCCCCchHHHHH
Confidence 489999976655
No 65
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=26.46 E-value=17 Score=27.90 Aligned_cols=12 Identities=42% Similarity=1.035 Sum_probs=9.0
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|...+..
T Consensus 36 ~~C~~C~~~~~~ 47 (112)
T 1syr_A 36 EWCGPCKRIAPF 47 (112)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999765543
No 66
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=26.45 E-value=17 Score=28.18 Aligned_cols=12 Identities=17% Similarity=0.257 Sum_probs=9.0
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.|||-|.+...
T Consensus 38 a~wC~~C~~~~p 49 (118)
T 1zma_A 38 RKTCPYCRKFAG 49 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCccHHHHHH
Confidence 489999976543
No 67
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=26.38 E-value=23 Score=26.77 Aligned_cols=11 Identities=27% Similarity=0.498 Sum_probs=8.5
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.|||-|.....
T Consensus 28 ~wC~~C~~~~p 38 (105)
T 4euy_A 28 ENCGVCDVMLR 38 (105)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCcchHHHHH
Confidence 89999976543
No 68
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.84 E-value=18 Score=28.34 Aligned_cols=12 Identities=33% Similarity=0.983 Sum_probs=9.1
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 32 ~wC~~C~~~~p~ 43 (126)
T 1x5e_A 32 PWCPACQNLQPE 43 (126)
T ss_dssp SSCHHHHHHHHH
T ss_pred CCCHHHHHHhHH
Confidence 799999765543
No 69
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=25.83 E-value=18 Score=27.22 Aligned_cols=11 Identities=18% Similarity=0.422 Sum_probs=8.3
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 32 ~~C~~C~~~~~ 42 (111)
T 3gnj_A 32 KNCHVCQKVTP 42 (111)
T ss_dssp SSCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999965543
No 70
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=25.69 E-value=23 Score=28.21 Aligned_cols=11 Identities=45% Similarity=1.256 Sum_probs=8.6
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 40 ~~C~~C~~~~~ 50 (152)
T 2lja_A 40 TWCGPCRGELP 50 (152)
T ss_dssp SSCCGGGGTHH
T ss_pred CcCHhHHHHhH
Confidence 89999976544
No 71
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=25.39 E-value=29 Score=26.75 Aligned_cols=12 Identities=42% Similarity=1.113 Sum_probs=8.9
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+.|......
T Consensus 31 ~~C~~C~~~~~~ 42 (122)
T 3aps_A 31 PWCGPCQNFAPE 42 (122)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999665543
No 72
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=25.37 E-value=18 Score=27.98 Aligned_cols=11 Identities=36% Similarity=0.939 Sum_probs=8.3
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 34 ~~C~~C~~~~~ 44 (136)
T 1lu4_A 34 PWCPFCNAEAP 44 (136)
T ss_dssp TTCHHHHHHHH
T ss_pred CcChhHHHHHH
Confidence 79999966443
No 73
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=25.25 E-value=18 Score=28.57 Aligned_cols=12 Identities=33% Similarity=1.052 Sum_probs=9.0
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 52 ~wC~~C~~~~p~ 63 (128)
T 3ul3_B 52 KWCQACTMQSTE 63 (128)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHhHH
Confidence 899999665543
No 74
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=25.24 E-value=2.1e+02 Score=25.98 Aligned_cols=42 Identities=17% Similarity=0.210 Sum_probs=30.2
Q ss_pred eeEEEEeCC-CCCCCcccccCC------ceeEEEeccccccCcceEEcc
Q 016264 249 GFVVEYGKD-RDVDLGFHVDDS------EVTLNVCLGKQFTGGELFFRG 290 (392)
Q Consensus 249 ~FVVrY~~~-~d~~L~~H~D~S------evTLNI~Ln~dFeGGgl~F~~ 290 (392)
.++|.-.++ ......+|.|.| .+++.-|+.-.=+||+|.|..
T Consensus 82 i~~v~~~~~~~~~~~~wHtD~sy~~~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 82 IIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp EEEEEEBTTBCCCCCSCBCTTTTSSSCEEEEEEEEEECCSSCCCEEEEE
T ss_pred EEEEeCCCCCCCcCCCcEeeccCccCCCceEEEEEEecCCCCCcceeee
Confidence 455655442 123457999998 589999997666899999975
No 75
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=25.22 E-value=20 Score=28.51 Aligned_cols=11 Identities=36% Similarity=1.087 Sum_probs=8.4
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 61 ~wC~~C~~~~~ 71 (141)
T 3hxs_A 61 DWCGPCKMVAP 71 (141)
T ss_dssp TTCTTHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999966543
No 76
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=25.12 E-value=19 Score=28.18 Aligned_cols=12 Identities=33% Similarity=0.816 Sum_probs=9.0
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+-|.....
T Consensus 40 a~wC~~C~~~~p 51 (116)
T 3qfa_C 40 ATWCGPSKMIKP 51 (116)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 389999976554
No 77
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=25.01 E-value=21 Score=28.05 Aligned_cols=11 Identities=36% Similarity=1.072 Sum_probs=8.6
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 43 ~~C~~C~~~~~ 53 (121)
T 2j23_A 43 TWCGPCKMIGP 53 (121)
T ss_dssp TTCSTHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 79999976554
No 78
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=24.97 E-value=19 Score=28.13 Aligned_cols=11 Identities=36% Similarity=1.008 Sum_probs=8.4
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 41 ~~C~~C~~~~~ 51 (119)
T 1w4v_A 41 QWCGPCKILGP 51 (119)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999965544
No 79
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=24.69 E-value=19 Score=28.43 Aligned_cols=13 Identities=31% Similarity=0.976 Sum_probs=9.7
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+-|...+..
T Consensus 38 a~wC~~C~~~~~~ 50 (133)
T 3fk8_A 38 ANWCTDCRALDKS 50 (133)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4899999766543
No 80
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=24.56 E-value=19 Score=28.24 Aligned_cols=12 Identities=42% Similarity=1.265 Sum_probs=8.8
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+-|.....
T Consensus 32 a~wC~~C~~~~~ 43 (118)
T 2f51_A 32 ATWCGPCQRLGQ 43 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 389999965544
No 81
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=24.56 E-value=22 Score=27.92 Aligned_cols=11 Identities=45% Similarity=0.954 Sum_probs=8.7
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 41 ~~C~~C~~~~~ 51 (148)
T 3hcz_A 41 SQCGHCQQETP 51 (148)
T ss_dssp GGGCTTCSHHH
T ss_pred CCCccHHHHHH
Confidence 89999976654
No 82
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=30.40 E-value=16 Score=26.94 Aligned_cols=11 Identities=36% Similarity=1.063 Sum_probs=8.6
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 29 ~~C~~C~~~~~ 39 (106)
T 2yj7_A 29 PWCGPCRMIAP 39 (106)
Confidence 79999976554
No 83
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=24.47 E-value=19 Score=28.19 Aligned_cols=12 Identities=33% Similarity=1.085 Sum_probs=9.4
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|...+..
T Consensus 40 ~wC~~C~~~~p~ 51 (114)
T 2oe3_A 40 TWCGPCKMMQPH 51 (114)
T ss_dssp TTCHHHHHTHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999776554
No 84
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=24.43 E-value=24 Score=27.76 Aligned_cols=11 Identities=27% Similarity=0.670 Sum_probs=8.2
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 43 ~~C~~C~~~~~ 53 (148)
T 3fkf_A 43 SWCDPQPEANA 53 (148)
T ss_dssp GGGCCCHHHHH
T ss_pred CCCHHHHHHhH
Confidence 79999965443
No 85
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.36 E-value=21 Score=28.03 Aligned_cols=12 Identities=33% Similarity=1.052 Sum_probs=9.0
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 35 ~wC~~C~~~~p~ 46 (133)
T 2dj3_A 35 PWCGHCKQLEPI 46 (133)
T ss_dssp TTCSHHHHHHHH
T ss_pred CCChhHHHHHHH
Confidence 799999765543
No 86
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=24.26 E-value=20 Score=28.05 Aligned_cols=11 Identities=27% Similarity=0.573 Sum_probs=8.5
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 36 ~wC~~C~~~~~ 46 (126)
T 2l57_A 36 DTCPYCVEMQK 46 (126)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCccHHHHHH
Confidence 79999966544
No 87
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.18 E-value=34 Score=26.62 Aligned_cols=12 Identities=42% Similarity=1.193 Sum_probs=9.0
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 35 ~wC~~C~~~~~~ 46 (133)
T 1x5d_A 35 PWCGHCKNLEPE 46 (133)
T ss_dssp TTCHHHHTHHHH
T ss_pred CCCHHHHhhcHH
Confidence 799999765543
No 88
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=24.13 E-value=20 Score=28.77 Aligned_cols=11 Identities=27% Similarity=0.906 Sum_probs=8.3
Q ss_pred ccccccchhhH
Q 016264 358 SSWCGECFREK 368 (392)
Q Consensus 358 ~~~c~~c~~~~ 368 (392)
+.||+-|....
T Consensus 40 a~wC~~C~~~~ 50 (134)
T 2fwh_A 40 ADWCVACKEFE 50 (134)
T ss_dssp CTTCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 48999996643
No 89
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=24.11 E-value=19 Score=27.84 Aligned_cols=11 Identities=45% Similarity=1.117 Sum_probs=8.6
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.|||-|...+.
T Consensus 28 ~~C~~C~~~~~ 38 (116)
T 2e7p_A 28 TYCGYCNRVKQ 38 (116)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 89999976554
No 90
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=24.10 E-value=20 Score=28.97 Aligned_cols=12 Identities=33% Similarity=1.021 Sum_probs=8.9
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+.|......
T Consensus 44 ~~C~~C~~~~~~ 55 (165)
T 3or5_A 44 TWCPPCRSEIPD 55 (165)
T ss_dssp TTSHHHHHHHHH
T ss_pred CcCHHHHHHHHH
Confidence 799999765443
No 91
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=24.00 E-value=20 Score=27.98 Aligned_cols=11 Identities=45% Similarity=1.138 Sum_probs=8.3
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 44 ~~C~~C~~~~~ 54 (145)
T 3erw_A 44 SWCPPCKKELP 54 (145)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 89999966543
No 92
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=23.90 E-value=20 Score=28.46 Aligned_cols=14 Identities=36% Similarity=0.724 Sum_probs=10.0
Q ss_pred cccccccchhhHHH
Q 016264 357 FSSWCGECFREKKE 370 (392)
Q Consensus 357 f~~~c~~c~~~~~~ 370 (392)
++.||+-|......
T Consensus 46 ~a~wC~~C~~~~~~ 59 (124)
T 1xfl_A 46 TASWCGPCRFIAPF 59 (124)
T ss_dssp ECTTCHHHHHHHHH
T ss_pred ECCCCHHHHHHHHH
Confidence 35899999765543
No 93
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=23.89 E-value=20 Score=28.73 Aligned_cols=12 Identities=33% Similarity=0.922 Sum_probs=9.1
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 48 ~wC~~C~~~~~~ 59 (136)
T 2l5l_A 48 DWCGPCKMVAPI 59 (136)
T ss_dssp TTSHHHHHHHHH
T ss_pred CcCHHHHHHHHH
Confidence 799999766543
No 94
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=23.85 E-value=30 Score=28.72 Aligned_cols=30 Identities=27% Similarity=0.519 Sum_probs=12.7
Q ss_pred CCcCCccCCccceeeEeeechhhhHHHHHhhhhccccccccchhhH
Q 016264 323 HRHGARATTSGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECFREK 368 (392)
Q Consensus 323 h~HeglpVTsG~RynLV~W~rss~~R~~~~y~~~f~~~c~~c~~~~ 368 (392)
|-|+...-.+.. ..||.|-. .||+-|.+-+
T Consensus 8 ~~~~~~~~~~~~-~~LV~F~A---------------~wC~~Ck~~~ 37 (116)
T 3dml_A 8 HHHGSDDDDKAE-LRLLMFEQ---------------PGCLYCARWD 37 (116)
T ss_dssp -----------C-EEEEEEEC---------------TTCHHHHHHH
T ss_pred cccCCCccccCC-CEEEEEEC---------------CCCHHHHHHH
Confidence 445555544443 45666543 8999997644
No 95
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=23.84 E-value=21 Score=26.97 Aligned_cols=12 Identities=33% Similarity=0.825 Sum_probs=8.8
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+.|.....
T Consensus 35 ~~~C~~C~~~~~ 46 (113)
T 1ti3_A 35 ASWCPPCKMIAP 46 (113)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999965543
No 96
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=23.83 E-value=20 Score=28.61 Aligned_cols=11 Identities=45% Similarity=1.144 Sum_probs=8.2
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 52 ~~C~~C~~~~~ 62 (156)
T 1kng_A 52 SWCVPCHDEAP 62 (156)
T ss_dssp TTCHHHHHHHH
T ss_pred ccCHhHHHHHH
Confidence 89999965443
No 97
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=23.60 E-value=21 Score=27.25 Aligned_cols=11 Identities=36% Similarity=1.090 Sum_probs=8.0
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 32 ~~C~~C~~~~~ 42 (138)
T 4evm_A 32 SWCSICLASLP 42 (138)
T ss_dssp TTCHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 89999955433
No 98
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=23.44 E-value=21 Score=27.57 Aligned_cols=12 Identities=42% Similarity=1.054 Sum_probs=8.9
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+-|.....
T Consensus 43 ~~~C~~C~~~~~ 54 (122)
T 2vlu_A 43 ASWCGPCRIMAP 54 (122)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 389999966544
No 99
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=23.31 E-value=21 Score=27.11 Aligned_cols=12 Identities=42% Similarity=1.046 Sum_probs=8.9
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+.|.....
T Consensus 37 ~~~C~~C~~~~~ 48 (118)
T 2vm1_A 37 ASWCGPCRVIAP 48 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHhH
Confidence 379999966554
No 100
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=23.21 E-value=21 Score=28.07 Aligned_cols=12 Identities=8% Similarity=0.340 Sum_probs=9.1
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|.+....
T Consensus 43 ~wC~~C~~~~p~ 54 (127)
T 3h79_A 43 PWSRHSVAAMRL 54 (127)
T ss_dssp TTCHHHHHHHHH
T ss_pred CccHHHHHHhHH
Confidence 899999765543
No 101
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=23.18 E-value=21 Score=27.68 Aligned_cols=13 Identities=38% Similarity=0.887 Sum_probs=9.7
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+.|......
T Consensus 45 ~~~C~~C~~~~~~ 57 (130)
T 1wmj_A 45 ASWCGPCRFIAPV 57 (130)
T ss_dssp SSSCSCSSSSHHH
T ss_pred CCCChhHHHHHHH
Confidence 3899999876543
No 102
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=23.09 E-value=36 Score=27.57 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=14.7
Q ss_pred ccceeeEeeechhhhHHHHHhhhhccccccccchhh
Q 016264 332 SGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECFRE 367 (392)
Q Consensus 332 sG~RynLV~W~rss~~R~~~~y~~~f~~~c~~c~~~ 367 (392)
.|.++++|.|.. +.||+-|..+
T Consensus 34 ~gk~~vvl~F~~--------------a~~C~~C~~~ 55 (160)
T 1xvw_A 34 RGAKNVLLVFFP--------------LAFTGICQGE 55 (160)
T ss_dssp TTTCEEEEEECS--------------CTTSSHHHHH
T ss_pred cCCCCEEEEEEC--------------CCCCCchHHH
Confidence 566666666653 2799999544
No 103
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=23.02 E-value=22 Score=27.91 Aligned_cols=10 Identities=20% Similarity=0.314 Sum_probs=7.7
Q ss_pred cccccchhhH
Q 016264 359 SWCGECFREK 368 (392)
Q Consensus 359 ~~c~~c~~~~ 368 (392)
.||+-|....
T Consensus 39 ~~C~~C~~~~ 48 (148)
T 2b5x_A 39 ISCHLCKEAM 48 (148)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHh
Confidence 7999996543
No 104
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.74 E-value=25 Score=28.13 Aligned_cols=13 Identities=15% Similarity=0.526 Sum_probs=9.9
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+-|......
T Consensus 35 a~wC~~C~~~~p~ 47 (137)
T 2dj0_A 35 ANWSNDCQSFAPI 47 (137)
T ss_dssp CTTCSTTTTTHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4899999776554
No 105
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.57 E-value=22 Score=28.18 Aligned_cols=12 Identities=42% Similarity=1.151 Sum_probs=9.1
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+-|......
T Consensus 44 ~wC~~C~~~~p~ 55 (140)
T 2dj1_A 44 PWCGHCKQFAPE 55 (140)
T ss_dssp TTCHHHHTTHHH
T ss_pred CCCHHHHHhhHH
Confidence 799999766543
No 106
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=22.32 E-value=35 Score=27.48 Aligned_cols=11 Identities=18% Similarity=0.311 Sum_probs=8.3
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+.|.....
T Consensus 34 ~wC~~C~~~~~ 44 (140)
T 3hz4_A 34 PACPYCKAMEP 44 (140)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999965543
No 107
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=22.10 E-value=23 Score=28.53 Aligned_cols=11 Identities=45% Similarity=1.389 Sum_probs=8.5
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.|||-|..+..
T Consensus 34 ~wC~~C~~~~~ 44 (151)
T 3raz_A 34 TWCGPCRKEMP 44 (151)
T ss_dssp TTCHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 89999976544
No 108
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=21.78 E-value=24 Score=28.11 Aligned_cols=13 Identities=23% Similarity=0.634 Sum_probs=9.5
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+-|......
T Consensus 55 a~wC~~C~~~~~~ 67 (139)
T 3d22_A 55 ARWCGPSRQIAPY 67 (139)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4899999665543
No 109
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=21.76 E-value=20 Score=28.30 Aligned_cols=10 Identities=20% Similarity=0.544 Sum_probs=8.2
Q ss_pred cccccchhhH
Q 016264 359 SWCGECFREK 368 (392)
Q Consensus 359 ~~c~~c~~~~ 368 (392)
.|||-|..+.
T Consensus 37 ~~C~~C~~~~ 46 (142)
T 3ewl_A 37 PDCSNCRKFE 46 (142)
T ss_dssp SSCHHHHHHH
T ss_pred CCCccHHHHH
Confidence 7999997763
No 110
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=21.72 E-value=24 Score=27.03 Aligned_cols=12 Identities=33% Similarity=0.971 Sum_probs=9.0
Q ss_pred cccccchhhHHH
Q 016264 359 SWCGECFREKKE 370 (392)
Q Consensus 359 ~~c~~c~~~~~~ 370 (392)
.||+.|......
T Consensus 40 ~~C~~C~~~~~~ 51 (121)
T 2i1u_A 40 TWCGPCKMVAPV 51 (121)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999665543
No 111
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=21.65 E-value=24 Score=28.11 Aligned_cols=11 Identities=27% Similarity=0.537 Sum_probs=8.2
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 38 ~wC~~C~~~~~ 48 (144)
T 1i5g_A 38 SWCPPSRAFTP 48 (144)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999965543
No 112
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=21.65 E-value=24 Score=29.25 Aligned_cols=13 Identities=31% Similarity=0.961 Sum_probs=9.6
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.|||-|......
T Consensus 57 a~wC~~C~~~~p~ 69 (154)
T 2ju5_A 57 SDWCMWCIKMQDQ 69 (154)
T ss_dssp TTTCHHHHHHHHH
T ss_pred CCCCHhHHHHHHH
Confidence 4899999766543
No 113
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=21.17 E-value=1.6e+02 Score=22.49 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=23.7
Q ss_pred cCCCceEEEecCCCCcCCccCCccceeeEeee
Q 016264 310 SHVPGRAVLHRGRHRHGARATTSGHRVNLLLW 341 (392)
Q Consensus 310 ~~~~G~AllHpGrh~HeglpVTsG~RynLV~W 341 (392)
...+|.+++.+....|...... ..++.+|.+
T Consensus 81 ~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~v~~ 111 (115)
T 1yhf_A 81 RVAEGQTIVMPAGIPHALYAVE-AFQMLLVVV 111 (115)
T ss_dssp EEETTCEEEECTTSCEEEEESS-CEEEEEEEE
T ss_pred EECCCCEEEECCCCCEEEEECC-CceEEEEEE
Confidence 4688999999999999987765 556655543
No 114
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=21.04 E-value=33 Score=27.52 Aligned_cols=11 Identities=36% Similarity=0.740 Sum_probs=8.4
Q ss_pred ccccccchhhH
Q 016264 358 SSWCGECFREK 368 (392)
Q Consensus 358 ~~~c~~c~~~~ 368 (392)
+.|||-|....
T Consensus 40 a~wC~~C~~~~ 50 (135)
T 3emx_A 40 SKTCPHCHRDW 50 (135)
T ss_dssp ETTCHHHHHHH
T ss_pred CCcCHhhhHhC
Confidence 38999996654
No 115
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=20.75 E-value=94 Score=32.03 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=36.4
Q ss_pred cCCCceEEEecCCCCcCCccCCccceeeEeeechhhhHHHHHhhhhccccccccchhhHHH
Q 016264 310 SHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECFREKKE 370 (392)
Q Consensus 310 ~~~~G~AllHpGrh~HeglpVTsG~RynLV~W~rss~~R~~~~y~~~f~~~c~~c~~~~~~ 370 (392)
...||..|+..+...|++.++.+|...-.|+.+ .-||.|..+..-
T Consensus 370 ~vePGD~V~WH~D~iH~V~~~h~g~~~s~V~YI----------------pa~P~~~~N~~y 414 (461)
T 2dbn_A 370 KLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYI----------------PAAPMCEKNLAY 414 (461)
T ss_dssp CBCTTCEEEEETTCCEEECCBSSCCSCCCEEEC----------------CBCEESHHHHHH
T ss_pred CCCCCCEEEEcCCCccccccCCCCCcceeEEEe----------------cCCCCcccCHHH
Confidence 468999999999999999999999877666543 458888766554
No 116
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=20.70 E-value=26 Score=27.90 Aligned_cols=11 Identities=18% Similarity=0.401 Sum_probs=8.4
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|..+-.
T Consensus 41 ~wC~~C~~~~~ 51 (142)
T 3eur_A 41 PGCHACAEMIE 51 (142)
T ss_dssp SSSHHHHHHHH
T ss_pred CCCccHHHHHH
Confidence 89999966543
No 117
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=20.64 E-value=28 Score=28.36 Aligned_cols=10 Identities=30% Similarity=1.092 Sum_probs=7.9
Q ss_pred cccccchhhH
Q 016264 359 SWCGECFREK 368 (392)
Q Consensus 359 ~~c~~c~~~~ 368 (392)
.||+.|...-
T Consensus 47 ~~C~~C~~~~ 56 (165)
T 3ha9_A 47 AWCPSCVYMA 56 (165)
T ss_dssp TTCTTHHHHH
T ss_pred CCCcchhhhH
Confidence 8999996554
No 118
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=20.62 E-value=25 Score=28.33 Aligned_cols=12 Identities=33% Similarity=1.027 Sum_probs=8.9
Q ss_pred ccccccchhhHH
Q 016264 358 SSWCGECFREKK 369 (392)
Q Consensus 358 ~~~c~~c~~~~~ 369 (392)
+.||+-|.....
T Consensus 49 a~wC~~C~~~~p 60 (133)
T 3cxg_A 49 AVWCKPCNKIKE 60 (133)
T ss_dssp CTTCHHHHHTHH
T ss_pred CCCCHHHHHHHH
Confidence 379999976543
No 119
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=20.47 E-value=26 Score=28.27 Aligned_cols=11 Identities=45% Similarity=1.126 Sum_probs=8.4
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.||+-|.....
T Consensus 48 ~~C~~C~~~~~ 58 (164)
T 2h30_A 48 SWCPLCLSELG 58 (164)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999966543
No 120
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=20.41 E-value=35 Score=28.33 Aligned_cols=9 Identities=22% Similarity=0.626 Sum_probs=4.6
Q ss_pred cccccchhh
Q 016264 359 SWCGECFRE 367 (392)
Q Consensus 359 ~~c~~c~~~ 367 (392)
.|||-|..+
T Consensus 41 ~~c~~C~~e 49 (157)
T 4g2e_A 41 AFTQVCTKE 49 (157)
T ss_dssp TTCCC----
T ss_pred CCCCccccc
Confidence 799999654
No 121
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=20.31 E-value=2.4e+02 Score=22.11 Aligned_cols=33 Identities=18% Similarity=0.062 Sum_probs=24.4
Q ss_pred ecCCCceEEEecCCCCcCCccCCcc--ceeeEeee
Q 016264 309 YSHVPGRAVLHRGRHRHGARATTSG--HRVNLLLW 341 (392)
Q Consensus 309 y~~~~G~AllHpGrh~HeglpVTsG--~RynLV~W 341 (392)
+...+|..++.|....|....++.. ..|+.|.|
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 3578999999999999998887755 33444443
No 122
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=20.27 E-value=35 Score=28.29 Aligned_cols=13 Identities=8% Similarity=-0.002 Sum_probs=9.5
Q ss_pred ccccccchhhHHH
Q 016264 358 SSWCGECFREKKE 370 (392)
Q Consensus 358 ~~~c~~c~~~~~~ 370 (392)
+.||+-|......
T Consensus 32 a~WC~~C~~~~p~ 44 (149)
T 3gix_A 32 RDEDPVCLQLDDI 44 (149)
T ss_dssp CTTSHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4899999665543
No 123
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=25.49 E-value=22 Score=27.95 Aligned_cols=11 Identities=27% Similarity=0.797 Sum_probs=8.4
Q ss_pred cccccchhhHH
Q 016264 359 SWCGECFREKK 369 (392)
Q Consensus 359 ~~c~~c~~~~~ 369 (392)
.|||-|.....
T Consensus 36 ~wC~~C~~~~~ 46 (143)
T 2lus_A 36 HWCPPCRGFTP 46 (143)
Confidence 79999965543
Done!