Query 016265
Match_columns 392
No_of_seqs 309 out of 1511
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 05:17:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016265.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016265hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 8.4E-55 1.8E-59 407.3 29.2 302 81-391 1-338 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 6.4E-49 1.4E-53 375.4 32.4 296 84-390 1-326 (326)
3 KOG0024 Sorbitol dehydrogenase 100.0 1.1E-48 2.5E-53 355.3 26.6 304 81-392 2-354 (354)
4 KOG0023 Alcohol dehydrogenase, 100.0 3.4E-47 7.4E-52 344.8 27.4 306 77-390 3-354 (360)
5 KOG1197 Predicted quinone oxid 100.0 8.3E-47 1.8E-51 330.9 27.0 298 80-392 5-332 (336)
6 COG1062 AdhC Zn-dependent alco 100.0 2.5E-46 5.5E-51 342.9 24.0 298 83-389 2-365 (366)
7 PRK09880 L-idonate 5-dehydroge 100.0 3.7E-44 8.1E-49 347.1 31.5 300 81-390 2-343 (343)
8 cd08239 THR_DH_like L-threonin 100.0 8.2E-44 1.8E-48 344.0 32.7 299 84-390 1-339 (339)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 7.9E-44 1.7E-48 348.4 31.6 299 84-388 1-371 (371)
10 PLN02740 Alcohol dehydrogenase 100.0 8.7E-43 1.9E-47 342.1 33.4 307 77-390 4-381 (381)
11 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.1E-42 2.5E-47 334.7 32.7 291 86-388 1-328 (329)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.3E-42 2.8E-47 338.3 32.3 298 83-389 1-357 (358)
13 PLN02586 probable cinnamyl alc 100.0 2.4E-42 5.3E-47 336.3 33.2 300 81-390 10-353 (360)
14 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.9E-42 6.4E-47 336.9 31.4 299 84-390 2-368 (368)
15 TIGR01202 bchC 2-desacetyl-2-h 100.0 4.6E-42 9.9E-47 327.6 29.8 290 83-389 1-308 (308)
16 PLN02178 cinnamyl-alcohol dehy 100.0 7.8E-42 1.7E-46 334.1 32.0 299 84-390 5-348 (375)
17 TIGR02819 fdhA_non_GSH formald 100.0 1.4E-41 3.1E-46 333.9 31.4 298 83-391 2-391 (393)
18 cd08300 alcohol_DH_class_III c 100.0 1.6E-41 3.4E-46 331.8 30.6 299 83-389 2-368 (368)
19 KOG0022 Alcohol dehydrogenase, 100.0 7.3E-42 1.6E-46 308.6 24.3 303 79-389 3-374 (375)
20 PLN02827 Alcohol dehydrogenase 100.0 3.8E-41 8.2E-46 330.0 30.7 298 82-390 11-376 (378)
21 cd08291 ETR_like_1 2-enoyl thi 100.0 6.8E-41 1.5E-45 321.7 31.8 291 84-389 1-324 (324)
22 cd08301 alcohol_DH_plants Plan 100.0 3.1E-41 6.7E-46 329.9 29.9 299 83-389 2-369 (369)
23 PRK10309 galactitol-1-phosphat 100.0 1.2E-40 2.6E-45 323.0 32.5 297 84-390 1-346 (347)
24 PLN02514 cinnamyl-alcohol dehy 100.0 3.3E-40 7.2E-45 321.1 33.6 300 82-391 8-351 (357)
25 cd08237 ribitol-5-phosphate_DH 100.0 1.4E-40 3.1E-45 321.7 29.2 293 84-391 3-340 (341)
26 TIGR03201 dearomat_had 6-hydro 100.0 4.4E-40 9.5E-45 319.4 31.2 296 87-390 2-349 (349)
27 cd08238 sorbose_phosphate_red 100.0 6E-40 1.3E-44 324.9 31.7 302 83-390 2-368 (410)
28 cd08277 liver_alcohol_DH_like 100.0 1.1E-39 2.5E-44 318.4 32.4 298 83-389 2-365 (365)
29 cd08230 glucose_DH Glucose deh 100.0 6E-40 1.3E-44 319.1 29.2 296 84-390 1-355 (355)
30 cd08233 butanediol_DH_like (2R 100.0 3.4E-39 7.3E-44 313.3 31.5 298 84-388 1-350 (351)
31 cd08292 ETR_like_2 2-enoyl thi 100.0 1.3E-38 2.7E-43 305.3 33.4 292 84-389 1-324 (324)
32 COG1063 Tdh Threonine dehydrog 100.0 5.5E-39 1.2E-43 310.6 29.0 298 84-390 1-350 (350)
33 cd08296 CAD_like Cinnamyl alco 100.0 4.4E-38 9.5E-43 303.4 33.0 296 84-389 1-333 (333)
34 PLN03154 putative allyl alcoho 100.0 9.3E-38 2E-42 302.8 35.1 293 82-391 7-346 (348)
35 cd08293 PTGR2 Prostaglandin re 100.0 4.2E-38 9.2E-43 304.7 31.3 281 95-390 20-345 (345)
36 cd08231 MDR_TM0436_like Hypoth 100.0 7.2E-38 1.6E-42 305.1 32.8 298 85-390 2-361 (361)
37 cd08295 double_bond_reductase_ 100.0 8.8E-38 1.9E-42 301.9 32.1 289 84-390 8-338 (338)
38 cd08294 leukotriene_B4_DH_like 100.0 1.2E-37 2.7E-42 299.2 32.9 284 83-390 2-329 (329)
39 PRK10754 quinone oxidoreductas 100.0 1.3E-37 2.9E-42 298.9 32.8 296 83-390 1-327 (327)
40 KOG0025 Zn2+-binding dehydroge 100.0 4.6E-38 1E-42 280.6 26.7 300 78-390 14-352 (354)
41 cd08274 MDR9 Medium chain dehy 100.0 2.6E-37 5.6E-42 299.6 34.4 303 84-390 1-350 (350)
42 PRK10083 putative oxidoreducta 100.0 2.6E-37 5.5E-42 298.6 32.5 299 84-390 1-337 (339)
43 cd08285 NADP_ADH NADP(H)-depen 100.0 2.5E-37 5.4E-42 300.2 31.8 299 84-390 1-351 (351)
44 TIGR02825 B4_12hDH leukotriene 100.0 4.7E-37 1E-41 295.2 32.0 273 93-389 14-325 (325)
45 cd05284 arabinose_DH_like D-ar 100.0 6.2E-37 1.3E-41 295.9 32.4 298 84-390 1-340 (340)
46 cd08246 crotonyl_coA_red croto 100.0 1E-36 2.3E-41 300.4 32.2 310 76-389 5-392 (393)
47 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.4E-36 3.1E-41 292.8 32.2 295 85-389 1-334 (336)
48 cd08283 FDH_like_1 Glutathione 100.0 1.7E-36 3.6E-41 298.1 31.9 299 84-390 1-386 (386)
49 TIGR01751 crot-CoA-red crotony 100.0 2.3E-36 5E-41 298.3 32.9 309 79-391 3-388 (398)
50 KOG1198 Zinc-binding oxidoredu 100.0 7.8E-37 1.7E-41 292.5 28.5 296 84-391 5-346 (347)
51 cd08244 MDR_enoyl_red Possible 100.0 7.7E-36 1.7E-40 285.9 35.0 296 84-390 1-324 (324)
52 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.9E-36 6.3E-41 291.4 31.9 298 84-389 1-341 (341)
53 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.3E-36 4.9E-41 293.4 29.7 298 84-388 1-350 (350)
54 cd08270 MDR4 Medium chain dehy 100.0 1.7E-35 3.6E-40 281.3 34.1 284 84-390 1-305 (305)
55 PTZ00354 alcohol dehydrogenase 100.0 1.5E-35 3.2E-40 285.0 34.1 295 83-391 1-329 (334)
56 cd05283 CAD1 Cinnamyl alcohol 100.0 8.2E-36 1.8E-40 288.0 32.0 295 85-389 1-337 (337)
57 cd08290 ETR 2-enoyl thioester 100.0 9.4E-36 2E-40 287.8 32.4 295 84-390 1-341 (341)
58 cd05278 FDH_like Formaldehyde 100.0 4.7E-36 1E-40 290.4 30.2 299 84-390 1-347 (347)
59 PRK09422 ethanol-active dehydr 100.0 1.3E-35 2.9E-40 286.3 32.3 297 84-390 1-336 (338)
60 cd08278 benzyl_alcohol_DH Benz 100.0 9E-36 1.9E-40 290.9 31.3 297 83-389 2-365 (365)
61 cd08297 CAD3 Cinnamyl alcohol 100.0 1.9E-35 4E-40 285.8 32.8 300 84-390 1-341 (341)
62 cd08250 Mgc45594_like Mgc45594 100.0 2.3E-35 5E-40 283.6 32.9 291 84-389 2-329 (329)
63 cd08286 FDH_like_ADH2 formalde 100.0 1.3E-35 2.8E-40 287.5 31.0 299 84-390 1-345 (345)
64 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.1E-35 4.5E-40 286.6 31.1 300 84-390 1-350 (350)
65 cd08242 MDR_like Medium chain 100.0 1.9E-35 4.1E-40 283.1 30.3 288 84-390 1-319 (319)
66 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 5.8E-35 1.3E-39 281.4 33.5 299 84-390 1-338 (338)
67 PRK13771 putative alcohol dehy 100.0 1.7E-35 3.6E-40 285.2 29.6 297 84-390 1-333 (334)
68 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.8E-35 6E-40 287.7 31.4 298 84-389 1-367 (367)
69 cd08299 alcohol_DH_class_I_II_ 100.0 2.3E-35 5E-40 288.7 30.9 299 83-390 7-373 (373)
70 cd08284 FDH_like_2 Glutathione 100.0 2.8E-35 6E-40 284.8 31.1 296 84-390 1-344 (344)
71 cd08235 iditol_2_DH_like L-idi 100.0 4.4E-35 9.5E-40 283.3 32.3 296 84-389 1-343 (343)
72 cd08259 Zn_ADH5 Alcohol dehydr 100.0 5.5E-35 1.2E-39 280.7 31.7 297 84-389 1-332 (332)
73 cd08282 PFDH_like Pseudomonas 100.0 5.1E-35 1.1E-39 286.6 32.0 296 84-390 1-375 (375)
74 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 7.3E-35 1.6E-39 279.2 31.9 296 84-390 1-325 (325)
75 cd08260 Zn_ADH6 Alcohol dehydr 100.0 7.9E-35 1.7E-39 281.9 32.4 299 84-389 1-344 (345)
76 cd08249 enoyl_reductase_like e 100.0 4.7E-35 1E-39 283.0 30.4 297 84-390 1-339 (339)
77 cd05279 Zn_ADH1 Liver alcohol 100.0 4.5E-35 9.7E-40 286.0 29.9 295 85-388 2-364 (365)
78 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.2E-34 2.5E-39 279.9 32.3 297 84-390 1-337 (337)
79 cd08287 FDH_like_ADH3 formalde 100.0 8.2E-35 1.8E-39 281.7 31.0 297 84-390 1-345 (345)
80 cd08298 CAD2 Cinnamyl alcohol 100.0 1.9E-34 4.1E-39 277.3 33.0 293 84-388 1-329 (329)
81 cd08279 Zn_ADH_class_III Class 100.0 1.4E-34 2.9E-39 282.4 30.9 296 84-387 1-362 (363)
82 cd08289 MDR_yhfp_like Yhfp put 100.0 2E-34 4.4E-39 276.5 31.2 298 84-390 1-326 (326)
83 cd08248 RTN4I1 Human Reticulon 100.0 2.3E-34 4.9E-39 279.0 31.2 295 84-389 1-350 (350)
84 TIGR02823 oxido_YhdH putative 100.0 4.6E-34 9.9E-39 273.8 32.6 294 85-389 1-322 (323)
85 cd08243 quinone_oxidoreductase 100.0 4.4E-34 9.5E-39 272.7 31.6 293 84-388 1-319 (320)
86 cd08234 threonine_DH_like L-th 100.0 7.2E-34 1.6E-38 273.7 33.3 294 84-388 1-333 (334)
87 cd08252 AL_MDR Arginate lyase 100.0 8.3E-34 1.8E-38 273.4 33.5 295 84-389 1-336 (336)
88 cd05282 ETR_like 2-enoyl thioe 100.0 5.9E-34 1.3E-38 272.7 31.6 286 90-389 4-323 (323)
89 cd08236 sugar_DH NAD(P)-depend 100.0 5.8E-34 1.3E-38 275.6 31.2 295 84-388 1-343 (343)
90 cd08276 MDR7 Medium chain dehy 100.0 1.7E-33 3.6E-38 270.8 34.1 300 84-389 1-335 (336)
91 PRK05396 tdh L-threonine 3-deh 100.0 5.2E-34 1.1E-38 275.8 30.0 299 84-391 1-341 (341)
92 cd08232 idonate-5-DH L-idonate 100.0 1E-33 2.2E-38 273.4 30.9 289 98-390 9-339 (339)
93 cd08266 Zn_ADH_like1 Alcohol d 100.0 3E-33 6.6E-38 269.1 34.0 302 84-390 1-342 (342)
94 cd08264 Zn_ADH_like2 Alcohol d 100.0 7.5E-34 1.6E-38 272.7 29.6 289 84-386 1-324 (325)
95 cd08288 MDR_yhdh Yhdh putative 100.0 3.4E-33 7.4E-38 267.8 33.8 296 84-390 1-324 (324)
96 cd08272 MDR6 Medium chain dehy 100.0 4.5E-33 9.7E-38 266.1 33.6 297 84-390 1-326 (326)
97 cd08273 MDR8 Medium chain dehy 100.0 3.4E-33 7.4E-38 268.5 32.8 288 85-388 2-330 (331)
98 cd05281 TDH Threonine dehydrog 100.0 1.7E-33 3.6E-38 272.4 30.2 299 84-390 1-341 (341)
99 cd05289 MDR_like_2 alcohol deh 100.0 5.1E-33 1.1E-37 263.5 32.6 294 84-388 1-309 (309)
100 cd05285 sorbitol_DH Sorbitol d 100.0 2.7E-33 5.8E-38 271.1 30.4 295 87-388 2-341 (343)
101 cd08253 zeta_crystallin Zeta-c 100.0 6.3E-33 1.4E-37 264.6 32.0 298 84-390 1-325 (325)
102 cd05286 QOR2 Quinone oxidoredu 100.0 1.1E-32 2.3E-37 262.2 32.7 290 85-390 1-320 (320)
103 PLN02702 L-idonate 5-dehydroge 100.0 1E-32 2.2E-37 269.2 33.2 298 84-389 19-363 (364)
104 cd08265 Zn_ADH3 Alcohol dehydr 100.0 5.6E-33 1.2E-37 273.0 31.2 300 80-388 25-383 (384)
105 cd08247 AST1_like AST1 is a cy 100.0 1.3E-32 2.7E-37 267.3 32.9 297 85-389 2-351 (352)
106 cd05276 p53_inducible_oxidored 100.0 1.1E-32 2.3E-37 262.6 31.6 291 84-388 1-323 (323)
107 cd08245 CAD Cinnamyl alcohol d 100.0 9.5E-33 2.1E-37 265.6 31.2 294 85-388 1-330 (330)
108 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.8E-32 3.9E-37 261.2 30.6 277 97-388 6-311 (312)
109 TIGR00692 tdh L-threonine 3-de 100.0 1E-32 2.3E-37 266.7 28.7 293 90-390 5-340 (340)
110 COG2130 Putative NADP-dependen 100.0 4.6E-33 1E-37 251.2 23.0 276 96-391 25-339 (340)
111 cd08271 MDR5 Medium chain dehy 100.0 1.2E-31 2.6E-36 256.5 34.0 294 84-390 1-325 (325)
112 cd05288 PGDH Prostaglandin deh 100.0 1.1E-31 2.5E-36 257.8 31.4 287 84-388 2-329 (329)
113 cd08251 polyketide_synthase po 100.0 9.2E-32 2E-36 254.4 29.1 272 106-388 2-303 (303)
114 cd08267 MDR1 Medium chain dehy 100.0 1.5E-31 3.4E-36 255.0 30.2 290 88-388 2-319 (319)
115 cd08268 MDR2 Medium chain dehy 100.0 4.3E-31 9.2E-36 252.4 33.1 298 84-390 1-328 (328)
116 TIGR02824 quinone_pig3 putativ 100.0 4.6E-31 1E-35 251.9 33.0 292 84-389 1-324 (325)
117 cd08275 MDR3 Medium chain dehy 100.0 2.4E-30 5.3E-35 248.7 33.5 291 85-390 1-337 (337)
118 cd08241 QOR1 Quinone oxidoredu 100.0 4.8E-30 1E-34 244.5 33.4 291 84-389 1-323 (323)
119 TIGR03366 HpnZ_proposed putati 100.0 6.4E-31 1.4E-35 247.5 21.4 224 145-370 1-280 (280)
120 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.4E-29 3E-34 241.4 28.6 236 84-327 1-267 (306)
121 cd05195 enoyl_red enoyl reduct 100.0 2.2E-29 4.9E-34 235.9 26.8 260 112-388 1-293 (293)
122 smart00829 PKS_ER Enoylreducta 100.0 7.2E-29 1.6E-33 232.3 26.8 255 116-388 2-288 (288)
123 cd05188 MDR Medium chain reduc 100.0 1.6E-27 3.5E-32 221.7 25.4 212 113-327 1-235 (271)
124 cd08255 2-desacetyl-2-hydroxye 100.0 2.2E-26 4.8E-31 215.9 24.3 230 140-388 18-277 (277)
125 KOG1196 Predicted NAD-dependen 99.9 3.9E-25 8.5E-30 199.2 26.0 267 107-391 33-341 (343)
126 KOG1202 Animal-type fatty acid 99.9 3.5E-26 7.5E-31 233.2 16.4 276 93-391 1424-1742(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.8 4.2E-18 9E-23 137.1 10.0 91 111-202 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.4 9.3E-13 2E-17 109.1 10.3 83 244-327 1-92 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 1.3E-12 2.8E-17 107.8 4.3 108 277-388 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.3 8.5E-11 1.8E-15 114.9 14.3 162 221-390 188-376 (413)
131 PRK09424 pntA NAD(P) transhydr 99.0 1.4E-09 3.1E-14 109.0 11.6 131 230-362 162-339 (509)
132 TIGR00561 pntA NAD(P) transhyd 98.4 2.3E-06 5E-11 85.9 12.1 94 231-326 162-286 (511)
133 PRK11873 arsM arsenite S-adeno 98.3 5.6E-06 1.2E-10 77.5 12.1 157 227-387 72-258 (272)
134 PRK05476 S-adenosyl-L-homocyst 98.2 7.3E-06 1.6E-10 80.7 10.7 100 220-327 197-302 (425)
135 PRK08306 dipicolinate synthase 98.1 4.7E-05 1E-09 72.1 13.0 99 224-327 142-244 (296)
136 TIGR00936 ahcY adenosylhomocys 98.1 2.9E-05 6.2E-10 76.1 10.9 99 221-327 181-285 (406)
137 PRK00517 prmA ribosomal protei 98.0 6E-05 1.3E-09 69.7 11.8 138 162-324 65-213 (250)
138 PLN02494 adenosylhomocysteinas 97.9 4.4E-05 9.5E-10 75.6 8.8 97 222-326 241-343 (477)
139 cd05213 NAD_bind_Glutamyl_tRNA 97.7 8.3E-05 1.8E-09 71.0 6.4 103 197-306 139-248 (311)
140 PTZ00075 Adenosylhomocysteinas 97.6 0.00055 1.2E-08 68.1 11.8 89 230-326 251-343 (476)
141 TIGR00518 alaDH alanine dehydr 97.6 0.00028 6.1E-09 69.0 9.5 92 233-326 167-269 (370)
142 PRK12771 putative glutamate sy 97.6 0.00011 2.4E-09 76.1 6.4 76 229-306 133-232 (564)
143 PF02353 CMAS: Mycolic acid cy 97.5 0.00022 4.7E-09 66.7 6.7 96 225-323 55-165 (273)
144 PRK08324 short chain dehydroge 97.4 0.00086 1.9E-08 71.1 10.4 109 186-305 385-507 (681)
145 TIGR01035 hemA glutamyl-tRNA r 97.4 1.8E-05 3.9E-10 78.6 -2.4 148 145-306 89-250 (417)
146 COG2518 Pcm Protein-L-isoaspar 97.4 0.0022 4.7E-08 56.8 10.8 101 221-325 61-170 (209)
147 PRK00045 hemA glutamyl-tRNA re 97.3 0.0003 6.5E-09 70.1 5.5 148 145-306 91-252 (423)
148 TIGR02853 spore_dpaA dipicolin 97.3 0.0011 2.4E-08 62.4 8.9 91 232-327 150-243 (287)
149 PRK00377 cbiT cobalt-precorrin 97.3 0.0024 5.2E-08 56.8 10.3 117 225-356 33-164 (198)
150 PRK05786 fabG 3-ketoacyl-(acyl 97.2 0.003 6.6E-08 57.3 11.0 94 232-326 4-137 (238)
151 PRK11705 cyclopropane fatty ac 97.2 0.0016 3.4E-08 64.0 9.5 101 220-323 154-266 (383)
152 TIGR00406 prmA ribosomal prote 97.2 0.0035 7.7E-08 59.2 11.4 111 230-357 157-278 (288)
153 COG2230 Cfa Cyclopropane fatty 97.2 0.0033 7.2E-08 58.4 10.8 98 225-325 65-177 (283)
154 PF11017 DUF2855: Protein of u 97.2 0.088 1.9E-06 49.8 19.8 167 151-325 38-232 (314)
155 COG2242 CobL Precorrin-6B meth 97.1 0.0073 1.6E-07 52.4 11.3 114 226-355 28-153 (187)
156 PRK14967 putative methyltransf 97.1 0.014 3E-07 52.9 13.8 129 225-371 29-193 (223)
157 COG3967 DltE Short-chain dehyd 97.1 0.0018 3.9E-08 56.8 7.0 73 232-305 4-87 (245)
158 PF12847 Methyltransf_18: Meth 97.0 0.0041 8.8E-08 49.4 8.5 89 232-322 1-109 (112)
159 PF01488 Shikimate_DH: Shikima 97.0 0.0011 2.3E-08 55.2 4.9 91 231-325 10-110 (135)
160 PRK13943 protein-L-isoaspartat 97.0 0.008 1.7E-07 57.5 11.1 96 224-323 72-179 (322)
161 PLN03209 translocon at the inn 96.9 0.0052 1.1E-07 62.8 10.0 79 226-305 73-168 (576)
162 PRK05993 short chain dehydroge 96.9 0.0061 1.3E-07 57.0 9.9 73 232-305 3-85 (277)
163 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0022 4.8E-08 56.0 6.5 107 231-357 34-148 (178)
164 PRK05693 short chain dehydroge 96.9 0.0066 1.4E-07 56.6 10.2 71 234-305 2-81 (274)
165 PRK12742 oxidoreductase; Provi 96.9 0.0078 1.7E-07 54.6 10.4 73 232-305 5-84 (237)
166 COG4221 Short-chain alcohol de 96.9 0.0028 6.1E-08 57.3 7.0 73 232-305 5-90 (246)
167 COG0300 DltE Short-chain dehyd 96.8 0.0053 1.1E-07 56.7 7.8 75 230-305 3-93 (265)
168 TIGR02469 CbiT precorrin-6Y C5 96.8 0.026 5.7E-07 45.4 11.3 96 226-323 13-121 (124)
169 KOG1205 Predicted dehydrogenas 96.7 0.011 2.4E-07 55.1 9.8 94 232-327 11-152 (282)
170 PF13460 NAD_binding_10: NADH( 96.7 0.011 2.4E-07 51.3 9.6 88 236-327 1-100 (183)
171 PRK06182 short chain dehydroge 96.7 0.014 2.9E-07 54.4 10.5 73 232-305 2-83 (273)
172 COG0686 Ald Alanine dehydrogen 96.7 0.0044 9.6E-08 57.7 6.8 90 234-325 169-269 (371)
173 PF01135 PCMT: Protein-L-isoas 96.7 0.013 2.9E-07 52.4 9.5 101 222-325 62-173 (209)
174 COG2226 UbiE Methylase involve 96.5 0.018 3.8E-07 52.5 9.6 99 226-327 45-159 (238)
175 PF00670 AdoHcyase_NAD: S-aden 96.5 0.02 4.3E-07 48.8 9.0 90 230-327 20-113 (162)
176 PRK13942 protein-L-isoaspartat 96.5 0.065 1.4E-06 48.1 12.8 98 224-324 68-176 (212)
177 PRK08317 hypothetical protein; 96.4 0.042 9.2E-07 49.7 11.2 98 225-324 12-124 (241)
178 PRK07060 short chain dehydroge 96.3 0.015 3.3E-07 52.9 8.1 73 232-305 8-86 (245)
179 PRK08339 short chain dehydroge 96.3 0.038 8.2E-07 51.3 10.5 42 232-274 7-48 (263)
180 cd01078 NAD_bind_H4MPT_DH NADP 96.3 0.015 3.2E-07 51.5 7.3 73 232-305 27-106 (194)
181 PRK06139 short chain dehydroge 96.3 0.015 3.3E-07 56.0 7.9 73 232-305 6-93 (330)
182 PRK00107 gidB 16S rRNA methylt 96.3 0.029 6.3E-07 49.4 9.0 92 230-324 43-145 (187)
183 PRK08265 short chain dehydroge 96.2 0.047 1E-06 50.4 10.6 73 232-305 5-89 (261)
184 PRK07109 short chain dehydroge 96.2 0.04 8.6E-07 53.2 10.4 73 232-305 7-94 (334)
185 PRK13944 protein-L-isoaspartat 96.2 0.085 1.8E-06 47.1 11.8 98 224-323 64-172 (205)
186 KOG1201 Hydroxysteroid 17-beta 96.2 0.019 4.1E-07 53.5 7.6 74 230-305 35-123 (300)
187 PRK06057 short chain dehydroge 96.2 0.021 4.5E-07 52.5 8.1 73 232-305 6-88 (255)
188 PRK05872 short chain dehydroge 96.1 0.016 3.4E-07 54.9 7.3 73 232-305 8-94 (296)
189 PRK07574 formate dehydrogenase 96.1 0.046 1E-06 53.6 10.6 106 232-356 191-304 (385)
190 COG2227 UbiG 2-polyprenyl-3-me 96.1 0.012 2.7E-07 53.0 6.0 87 231-323 58-160 (243)
191 PRK06500 short chain dehydroge 96.1 0.057 1.2E-06 49.2 10.7 73 232-305 5-89 (249)
192 CHL00194 ycf39 Ycf39; Provisio 96.1 0.025 5.5E-07 54.0 8.6 90 235-325 2-110 (317)
193 PLN03139 formate dehydrogenase 96.1 0.043 9.3E-07 53.8 10.1 106 232-356 198-311 (386)
194 COG2910 Putative NADH-flavin r 96.1 0.021 4.6E-07 49.3 6.9 90 235-327 2-107 (211)
195 PRK06949 short chain dehydroge 96.1 0.026 5.5E-07 51.9 8.1 43 231-274 7-49 (258)
196 PRK07231 fabG 3-ketoacyl-(acyl 96.0 0.07 1.5E-06 48.6 10.8 42 232-274 4-45 (251)
197 PRK12367 short chain dehydroge 96.0 0.03 6.4E-07 51.5 8.0 72 232-305 13-88 (245)
198 PRK08261 fabG 3-ketoacyl-(acyl 96.0 0.0078 1.7E-07 60.5 4.5 83 227-327 28-126 (450)
199 TIGR00080 pimt protein-L-isoas 95.9 0.12 2.6E-06 46.4 11.7 99 223-324 68-177 (215)
200 PRK06200 2,3-dihydroxy-2,3-dih 95.9 0.034 7.4E-07 51.4 8.3 73 232-305 5-89 (263)
201 PRK03369 murD UDP-N-acetylmura 95.9 0.025 5.4E-07 57.6 7.8 71 230-305 9-79 (488)
202 PRK06484 short chain dehydroge 95.9 0.069 1.5E-06 54.7 11.2 74 231-305 267-352 (520)
203 PRK07832 short chain dehydroge 95.9 0.069 1.5E-06 49.6 10.3 70 235-305 2-87 (272)
204 PRK07806 short chain dehydroge 95.9 0.12 2.5E-06 47.2 11.6 36 232-268 5-40 (248)
205 PRK08177 short chain dehydroge 95.9 0.038 8.1E-07 49.8 8.2 71 234-305 2-80 (225)
206 PRK05866 short chain dehydroge 95.9 0.037 8.1E-07 52.3 8.5 73 232-305 39-126 (293)
207 PRK07831 short chain dehydroge 95.9 0.036 7.8E-07 51.2 8.2 75 230-305 14-106 (262)
208 PF06325 PrmA: Ribosomal prote 95.8 0.026 5.7E-07 53.2 7.2 140 164-324 108-259 (295)
209 cd01065 NAD_bind_Shikimate_DH 95.8 0.041 8.8E-07 46.5 7.7 100 223-325 8-117 (155)
210 KOG1270 Methyltransferases [Co 95.8 0.026 5.5E-07 51.5 6.6 87 233-323 90-194 (282)
211 PRK06128 oxidoreductase; Provi 95.8 0.1 2.3E-06 49.3 11.3 35 232-267 54-88 (300)
212 PRK07814 short chain dehydroge 95.8 0.034 7.4E-07 51.4 7.8 73 232-305 9-96 (263)
213 PRK08261 fabG 3-ketoacyl-(acyl 95.8 0.073 1.6E-06 53.5 10.7 73 232-305 209-293 (450)
214 PRK12809 putative oxidoreducta 95.8 0.025 5.3E-07 59.6 7.5 73 232-306 309-405 (639)
215 PRK07825 short chain dehydroge 95.8 0.043 9.4E-07 51.0 8.4 72 233-305 5-87 (273)
216 PRK12939 short chain dehydroge 95.7 0.1 2.2E-06 47.5 10.5 73 232-305 6-93 (250)
217 smart00846 Gp_dh_N Glyceraldeh 95.7 0.17 3.7E-06 42.8 10.9 107 235-342 2-136 (149)
218 PRK00258 aroE shikimate 5-dehy 95.7 0.034 7.5E-07 52.2 7.3 91 231-324 121-221 (278)
219 PRK13394 3-hydroxybutyrate deh 95.7 0.12 2.6E-06 47.4 10.9 73 232-305 6-93 (262)
220 PRK08287 cobalt-precorrin-6Y C 95.7 0.13 2.8E-06 45.1 10.5 114 226-356 25-150 (187)
221 PF01262 AlaDh_PNT_C: Alanine 95.7 0.014 3.1E-07 50.4 4.3 90 234-325 21-140 (168)
222 TIGR03325 BphB_TodD cis-2,3-di 95.7 0.038 8.2E-07 51.1 7.4 44 232-276 4-47 (262)
223 PRK07502 cyclohexadienyl dehyd 95.7 0.064 1.4E-06 51.1 9.1 87 234-325 7-101 (307)
224 PRK10258 biotin biosynthesis p 95.6 0.13 2.9E-06 47.3 10.9 95 226-324 36-140 (251)
225 PLN02244 tocopherol O-methyltr 95.6 0.14 3E-06 49.6 11.4 92 231-325 117-224 (340)
226 COG2264 PrmA Ribosomal protein 95.6 0.15 3.2E-06 48.0 11.1 141 163-324 108-263 (300)
227 PRK07677 short chain dehydroge 95.6 0.048 1E-06 50.0 7.9 41 233-274 1-41 (252)
228 TIGR01318 gltD_gamma_fam gluta 95.6 0.034 7.3E-07 56.3 7.2 74 231-306 139-236 (467)
229 PRK14103 trans-aconitate 2-met 95.6 0.13 2.9E-06 47.4 10.7 95 225-323 22-125 (255)
230 COG2519 GCD14 tRNA(1-methylade 95.6 0.17 3.7E-06 46.1 10.9 99 225-325 87-196 (256)
231 COG1748 LYS9 Saccharopine dehy 95.6 0.044 9.5E-07 53.5 7.6 91 234-326 2-101 (389)
232 PRK06196 oxidoreductase; Provi 95.6 0.054 1.2E-06 51.6 8.3 73 232-305 25-108 (315)
233 PRK06505 enoyl-(acyl carrier p 95.5 0.058 1.3E-06 50.3 8.3 73 232-305 6-94 (271)
234 PRK12829 short chain dehydroge 95.5 0.056 1.2E-06 49.7 8.1 76 229-305 7-95 (264)
235 KOG1014 17 beta-hydroxysteroid 95.5 0.041 8.9E-07 51.5 7.0 73 231-305 47-135 (312)
236 PLN02233 ubiquinone biosynthes 95.5 0.17 3.7E-06 47.0 11.2 97 226-325 67-183 (261)
237 PRK05867 short chain dehydroge 95.5 0.056 1.2E-06 49.6 7.9 73 232-305 8-95 (253)
238 PRK06398 aldose dehydrogenase; 95.5 0.11 2.4E-06 47.9 9.7 38 232-270 5-42 (258)
239 PRK08217 fabG 3-ketoacyl-(acyl 95.4 0.076 1.6E-06 48.4 8.6 73 232-305 4-91 (253)
240 PRK09291 short chain dehydroge 95.4 0.062 1.3E-06 49.3 8.0 72 233-305 2-82 (257)
241 PRK13243 glyoxylate reductase; 95.4 0.079 1.7E-06 51.1 8.8 104 232-356 149-260 (333)
242 PRK05854 short chain dehydroge 95.4 0.074 1.6E-06 50.8 8.5 41 232-273 13-53 (313)
243 PRK07062 short chain dehydroge 95.4 0.067 1.4E-06 49.4 8.0 42 232-274 7-48 (265)
244 PRK06101 short chain dehydroge 95.3 0.16 3.6E-06 46.1 10.3 43 234-277 2-44 (240)
245 PRK06180 short chain dehydroge 95.3 0.075 1.6E-06 49.6 8.2 73 232-305 3-87 (277)
246 PRK06841 short chain dehydroge 95.3 0.078 1.7E-06 48.6 8.2 73 232-305 14-98 (255)
247 TIGR01832 kduD 2-deoxy-D-gluco 95.3 0.078 1.7E-06 48.3 8.1 73 232-305 4-89 (248)
248 PF01118 Semialdhyde_dh: Semia 95.3 0.052 1.1E-06 44.1 6.2 90 235-327 1-100 (121)
249 PRK07478 short chain dehydroge 95.3 0.085 1.8E-06 48.4 8.3 73 232-305 5-92 (254)
250 PRK07533 enoyl-(acyl carrier p 95.3 0.092 2E-06 48.5 8.6 73 232-305 9-97 (258)
251 TIGR03840 TMPT_Se_Te thiopurin 95.3 0.13 2.7E-06 46.3 9.2 91 230-324 32-152 (213)
252 cd05311 NAD_bind_2_malic_enz N 95.3 0.24 5.2E-06 45.0 11.0 97 223-325 14-129 (226)
253 PRK07904 short chain dehydroge 95.3 0.095 2.1E-06 48.3 8.6 76 230-305 5-96 (253)
254 PRK00216 ubiE ubiquinone/menaq 95.2 0.35 7.5E-06 43.7 12.2 98 225-325 44-159 (239)
255 TIGR01532 E4PD_g-proteo D-eryt 95.2 0.25 5.5E-06 47.3 11.6 91 235-327 1-123 (325)
256 PRK12429 3-hydroxybutyrate deh 95.2 0.2 4.4E-06 45.7 10.8 73 232-305 3-90 (258)
257 PRK01683 trans-aconitate 2-met 95.2 0.2 4.3E-06 46.3 10.7 96 225-323 24-129 (258)
258 PRK09072 short chain dehydroge 95.2 0.075 1.6E-06 49.0 7.8 43 232-275 4-46 (263)
259 PRK07326 short chain dehydroge 95.2 0.093 2E-06 47.4 8.3 73 232-305 5-91 (237)
260 PRK06194 hypothetical protein; 95.2 0.097 2.1E-06 48.9 8.5 73 232-305 5-92 (287)
261 PF08241 Methyltransf_11: Meth 95.1 0.056 1.2E-06 41.0 5.7 79 243-322 5-95 (95)
262 PRK12828 short chain dehydroge 95.1 0.091 2E-06 47.3 7.9 73 232-305 6-91 (239)
263 PF03435 Saccharop_dh: Sacchar 95.1 0.038 8.2E-07 54.4 5.7 87 236-323 1-97 (386)
264 TIGR01809 Shik-DH-AROM shikima 95.1 0.094 2E-06 49.3 8.1 72 232-305 124-199 (282)
265 PRK08017 oxidoreductase; Provi 95.1 0.06 1.3E-06 49.3 6.7 71 234-305 3-83 (256)
266 PRK08415 enoyl-(acyl carrier p 95.1 0.11 2.3E-06 48.6 8.5 73 232-305 4-92 (274)
267 PRK07576 short chain dehydroge 95.1 0.11 2.3E-06 48.2 8.4 40 232-272 8-47 (264)
268 PRK12747 short chain dehydroge 95.1 0.19 4E-06 46.0 10.0 39 232-271 3-42 (252)
269 PLN02928 oxidoreductase family 95.0 0.073 1.6E-06 51.6 7.4 91 232-325 158-263 (347)
270 PRK07453 protochlorophyllide o 95.0 0.099 2.1E-06 50.0 8.3 42 232-274 5-46 (322)
271 PF01209 Ubie_methyltran: ubiE 95.0 0.045 9.8E-07 49.9 5.6 98 226-325 41-154 (233)
272 PRK07063 short chain dehydroge 95.0 0.1 2.2E-06 48.0 8.1 42 232-274 6-47 (260)
273 COG0169 AroE Shikimate 5-dehyd 95.0 0.07 1.5E-06 50.0 7.0 71 230-305 123-199 (283)
274 PF13241 NAD_binding_7: Putati 95.0 0.13 2.8E-06 40.5 7.5 86 232-327 6-94 (103)
275 PRK12769 putative oxidoreducta 95.0 0.056 1.2E-06 57.1 7.1 73 232-306 326-422 (654)
276 PRK08340 glucose-1-dehydrogena 95.0 0.11 2.3E-06 47.9 8.2 70 235-305 2-85 (259)
277 PRK04148 hypothetical protein; 95.0 0.1 2.2E-06 43.1 7.0 73 229-305 13-86 (134)
278 PRK12937 short chain dehydroge 95.0 0.29 6.2E-06 44.4 11.0 35 232-267 4-38 (245)
279 PRK14175 bifunctional 5,10-met 95.0 0.31 6.8E-06 45.7 11.1 95 213-327 137-233 (286)
280 PRK06603 enoyl-(acyl carrier p 95.0 0.11 2.4E-06 48.1 8.2 36 232-268 7-44 (260)
281 PRK06701 short chain dehydroge 95.0 0.26 5.6E-06 46.4 10.8 37 231-268 44-80 (290)
282 PRK08628 short chain dehydroge 94.9 0.12 2.5E-06 47.5 8.3 73 232-305 6-92 (258)
283 PLN03075 nicotianamine synthas 94.9 0.17 3.8E-06 47.6 9.3 93 231-324 122-233 (296)
284 COG1052 LdhA Lactate dehydroge 94.9 0.085 1.9E-06 50.5 7.4 85 232-325 145-237 (324)
285 PRK08862 short chain dehydroge 94.9 0.12 2.7E-06 46.8 8.2 73 232-305 4-92 (227)
286 PRK07985 oxidoreductase; Provi 94.9 0.27 5.7E-06 46.5 10.7 35 232-267 48-82 (294)
287 PRK06125 short chain dehydroge 94.9 0.13 2.8E-06 47.3 8.4 73 232-305 6-90 (259)
288 PRK08643 acetoin reductase; Va 94.9 0.12 2.7E-06 47.3 8.2 72 233-305 2-88 (256)
289 PRK05717 oxidoreductase; Valid 94.9 0.13 2.8E-06 47.3 8.3 73 232-305 9-93 (255)
290 PRK07424 bifunctional sterol d 94.8 0.061 1.3E-06 53.2 6.3 73 232-305 177-254 (406)
291 PRK06197 short chain dehydroge 94.8 0.12 2.6E-06 49.0 8.2 40 232-272 15-54 (306)
292 PRK05876 short chain dehydroge 94.8 0.13 2.9E-06 48.0 8.4 73 232-305 5-92 (275)
293 PRK08690 enoyl-(acyl carrier p 94.8 0.13 2.8E-06 47.6 8.2 36 232-268 5-42 (261)
294 PRK07523 gluconate 5-dehydroge 94.8 0.13 2.7E-06 47.2 8.1 73 232-305 9-96 (255)
295 PRK07774 short chain dehydroge 94.8 0.13 2.9E-06 46.8 8.2 41 232-273 5-45 (250)
296 PRK15469 ghrA bifunctional gly 94.8 0.12 2.5E-06 49.4 7.9 85 232-325 135-227 (312)
297 PRK07454 short chain dehydroge 94.8 0.16 3.5E-06 46.0 8.7 74 231-305 4-92 (241)
298 TIGR00563 rsmB ribosomal RNA s 94.7 0.49 1.1E-05 47.3 12.5 98 226-325 232-369 (426)
299 PRK12823 benD 1,6-dihydroxycyc 94.7 0.12 2.6E-06 47.5 7.8 73 232-305 7-93 (260)
300 PRK08213 gluconate 5-dehydroge 94.7 0.14 3.1E-06 47.0 8.2 73 232-305 11-98 (259)
301 PLN00141 Tic62-NAD(P)-related 94.7 0.093 2E-06 48.2 6.9 96 230-326 14-133 (251)
302 PF08704 GCD14: tRNA methyltra 94.7 0.16 3.4E-06 46.8 8.1 99 224-325 32-147 (247)
303 TIGR00507 aroE shikimate 5-deh 94.7 0.25 5.4E-06 46.2 9.8 90 230-325 114-215 (270)
304 PRK07035 short chain dehydroge 94.7 0.15 3.2E-06 46.7 8.2 42 232-274 7-48 (252)
305 PRK13403 ketol-acid reductoiso 94.7 0.27 5.9E-06 46.8 9.9 85 231-323 14-105 (335)
306 PRK08264 short chain dehydroge 94.7 0.13 2.8E-06 46.6 7.7 70 232-305 5-82 (238)
307 PRK06483 dihydromonapterin red 94.7 0.18 3.9E-06 45.7 8.6 72 233-305 2-83 (236)
308 PRK08277 D-mannonate oxidoredu 94.6 0.15 3.2E-06 47.5 8.2 73 232-305 9-96 (278)
309 PRK06720 hypothetical protein; 94.6 0.22 4.9E-06 43.0 8.7 40 232-272 15-54 (169)
310 PRK08589 short chain dehydroge 94.6 0.14 3E-06 47.7 8.0 72 232-305 5-91 (272)
311 PRK12550 shikimate 5-dehydroge 94.6 0.18 3.9E-06 47.1 8.6 74 223-305 112-187 (272)
312 PRK04266 fibrillarin; Provisio 94.6 0.47 1E-05 43.1 11.1 126 226-358 66-206 (226)
313 PRK07024 short chain dehydroge 94.6 0.16 3.5E-06 46.6 8.3 41 233-274 2-42 (257)
314 PTZ00098 phosphoethanolamine N 94.6 0.33 7.2E-06 45.1 10.4 100 222-324 42-156 (263)
315 PRK06181 short chain dehydroge 94.6 0.12 2.5E-06 47.7 7.4 39 233-272 1-39 (263)
316 KOG0725 Reductases with broad 94.6 0.096 2.1E-06 49.0 6.7 43 231-274 6-48 (270)
317 PLN02490 MPBQ/MSBQ methyltrans 94.6 0.22 4.8E-06 48.0 9.3 98 225-324 105-215 (340)
318 PRK11207 tellurite resistance 94.6 0.34 7.5E-06 42.9 10.0 92 227-323 25-133 (197)
319 PRK06114 short chain dehydroge 94.6 0.19 4.2E-06 46.1 8.7 37 232-269 7-43 (254)
320 PRK06079 enoyl-(acyl carrier p 94.6 0.16 3.5E-06 46.7 8.1 45 232-277 6-52 (252)
321 PRK06914 short chain dehydroge 94.6 0.14 3.1E-06 47.6 7.9 41 233-274 3-43 (280)
322 PRK08410 2-hydroxyacid dehydro 94.5 0.089 1.9E-06 50.2 6.5 101 232-356 144-252 (311)
323 PLN02253 xanthoxin dehydrogena 94.5 0.15 3.2E-06 47.5 8.0 40 232-272 17-56 (280)
324 PRK12384 sorbitol-6-phosphate 94.5 0.16 3.5E-06 46.6 8.1 40 233-273 2-41 (259)
325 PRK08159 enoyl-(acyl carrier p 94.5 0.17 3.7E-06 47.2 8.3 74 231-305 8-97 (272)
326 PRK05884 short chain dehydroge 94.5 0.14 3E-06 46.2 7.5 70 235-305 2-78 (223)
327 PRK08085 gluconate 5-dehydroge 94.5 0.18 3.9E-06 46.2 8.4 73 232-305 8-95 (254)
328 TIGR02752 MenG_heptapren 2-hep 94.5 0.34 7.3E-06 43.9 10.1 97 226-324 39-151 (231)
329 TIGR00477 tehB tellurite resis 94.5 0.29 6.3E-06 43.3 9.3 92 228-323 26-132 (195)
330 PRK13255 thiopurine S-methyltr 94.5 0.32 6.9E-06 43.9 9.6 90 229-322 34-153 (218)
331 PRK12481 2-deoxy-D-gluconate 3 94.4 0.17 3.6E-06 46.5 7.9 73 232-305 7-92 (251)
332 PRK12549 shikimate 5-dehydroge 94.4 0.12 2.7E-06 48.6 7.1 71 231-305 125-201 (284)
333 TIGR01777 yfcH conserved hypot 94.4 0.045 9.8E-07 51.1 4.2 66 236-305 1-66 (292)
334 PRK08251 short chain dehydroge 94.4 0.19 4.2E-06 45.7 8.3 41 233-274 2-42 (248)
335 PRK08267 short chain dehydroge 94.4 0.17 3.7E-06 46.5 8.0 71 234-305 2-86 (260)
336 PRK08655 prephenate dehydrogen 94.4 0.2 4.4E-06 50.2 9.0 84 235-324 2-92 (437)
337 COG0111 SerA Phosphoglycerate 94.4 0.17 3.7E-06 48.5 8.1 104 233-356 142-253 (324)
338 PRK08263 short chain dehydroge 94.4 0.19 4.2E-06 46.7 8.4 72 233-305 3-86 (275)
339 PRK06172 short chain dehydroge 94.4 0.19 4.1E-06 46.0 8.2 73 232-305 6-93 (253)
340 PRK08618 ornithine cyclodeamin 94.4 0.39 8.5E-06 46.1 10.7 95 228-327 122-224 (325)
341 PRK09242 tropinone reductase; 94.4 0.2 4.3E-06 46.0 8.4 42 232-274 8-49 (257)
342 PRK06077 fabG 3-ketoacyl-(acyl 94.4 0.47 1E-05 43.2 10.8 93 233-326 6-142 (252)
343 PRK06953 short chain dehydroge 94.4 0.17 3.8E-06 45.3 7.8 71 234-305 2-79 (222)
344 PRK14027 quinate/shikimate deh 94.4 0.18 3.9E-06 47.4 8.0 73 231-305 125-203 (283)
345 PRK14191 bifunctional 5,10-met 94.4 0.19 4E-06 47.1 8.0 95 213-327 136-232 (285)
346 PRK00312 pcm protein-L-isoaspa 94.3 0.81 1.8E-05 40.9 12.0 97 225-325 71-176 (212)
347 PRK06482 short chain dehydroge 94.3 0.19 4.2E-06 46.7 8.2 71 234-305 3-85 (276)
348 PRK05875 short chain dehydroge 94.3 0.14 3E-06 47.6 7.2 40 232-272 6-45 (276)
349 PRK06138 short chain dehydroge 94.3 0.19 4.2E-06 45.7 8.1 73 232-305 4-90 (252)
350 PF02558 ApbA: Ketopantoate re 94.3 0.096 2.1E-06 44.0 5.6 85 236-323 1-100 (151)
351 TIGR03206 benzo_BadH 2-hydroxy 94.3 0.21 4.5E-06 45.5 8.2 42 232-274 2-43 (250)
352 PRK06198 short chain dehydroge 94.3 0.14 3.1E-06 46.9 7.2 73 232-305 5-93 (260)
353 TIGR00438 rrmJ cell division p 94.2 0.42 9.2E-06 41.9 9.8 90 228-323 28-145 (188)
354 PRK12746 short chain dehydroge 94.2 0.38 8.2E-06 43.9 9.7 39 232-271 5-44 (254)
355 PRK06935 2-deoxy-D-gluconate 3 94.2 0.24 5.3E-06 45.4 8.5 35 232-267 14-48 (258)
356 PRK07856 short chain dehydroge 94.1 0.19 4.2E-06 45.9 7.7 38 232-270 5-42 (252)
357 PRK14192 bifunctional 5,10-met 94.1 0.47 1E-05 44.6 10.3 83 224-326 149-233 (283)
358 KOG0069 Glyoxylate/hydroxypyru 94.1 0.21 4.5E-06 47.8 7.9 86 231-324 160-253 (336)
359 PRK06719 precorrin-2 dehydroge 94.1 0.48 1E-05 40.4 9.5 86 232-323 12-99 (157)
360 PRK14189 bifunctional 5,10-met 94.1 0.33 7.2E-06 45.5 9.1 95 213-327 137-233 (285)
361 PRK06463 fabG 3-ketoacyl-(acyl 94.1 0.27 6E-06 45.0 8.6 73 232-305 6-88 (255)
362 PRK08303 short chain dehydroge 94.1 0.25 5.5E-06 47.0 8.5 35 232-267 7-41 (305)
363 PRK06179 short chain dehydroge 94.0 0.13 2.8E-06 47.6 6.3 70 233-305 4-82 (270)
364 KOG1199 Short-chain alcohol de 94.0 0.25 5.4E-06 42.3 7.2 74 231-305 7-92 (260)
365 PRK07067 sorbitol dehydrogenas 94.0 0.26 5.7E-06 45.2 8.3 73 232-305 5-89 (257)
366 TIGR01934 MenG_MenH_UbiE ubiqu 94.0 0.71 1.5E-05 41.2 11.0 97 226-325 33-144 (223)
367 PRK10538 malonic semialdehyde 94.0 0.26 5.7E-06 45.0 8.2 70 235-305 2-83 (248)
368 KOG1208 Dehydrogenases with di 93.9 0.32 7E-06 46.4 8.8 43 231-274 33-75 (314)
369 PRK13940 glutamyl-tRNA reducta 93.9 0.3 6.4E-06 48.5 8.9 74 229-306 177-252 (414)
370 cd05212 NAD_bind_m-THF_DH_Cycl 93.9 0.79 1.7E-05 38.2 10.1 93 214-326 8-102 (140)
371 PRK06113 7-alpha-hydroxysteroi 93.9 0.28 6E-06 45.0 8.3 73 232-305 10-97 (255)
372 TIGR01470 cysG_Nterm siroheme 93.9 0.84 1.8E-05 40.7 11.0 90 232-325 8-101 (205)
373 PRK08993 2-deoxy-D-gluconate 3 93.8 0.29 6.3E-06 44.9 8.3 73 232-305 9-94 (253)
374 cd01080 NAD_bind_m-THF_DH_Cycl 93.8 0.77 1.7E-05 39.6 10.3 94 213-327 23-119 (168)
375 PRK08226 short chain dehydroge 93.8 0.29 6.2E-06 45.1 8.3 38 232-270 5-42 (263)
376 PF03446 NAD_binding_2: NAD bi 93.8 0.35 7.7E-06 41.4 8.2 85 234-325 2-95 (163)
377 PRK12743 oxidoreductase; Provi 93.8 0.32 7E-06 44.6 8.6 72 233-305 2-89 (256)
378 PRK06124 gluconate 5-dehydroge 93.8 0.33 7.1E-06 44.5 8.6 73 232-305 10-97 (256)
379 PRK01438 murD UDP-N-acetylmura 93.8 0.28 6.1E-06 49.8 8.8 69 231-305 14-87 (480)
380 PRK07791 short chain dehydroge 93.8 0.32 7E-06 45.7 8.7 37 231-268 4-40 (286)
381 TIGR00537 hemK_rel_arch HemK-r 93.8 0.64 1.4E-05 40.3 9.9 89 230-324 17-140 (179)
382 PRK07074 short chain dehydroge 93.8 0.3 6.5E-06 44.7 8.3 41 233-274 2-42 (257)
383 PRK06718 precorrin-2 dehydroge 93.8 0.68 1.5E-05 41.2 10.2 90 232-325 9-101 (202)
384 PRK14194 bifunctional 5,10-met 93.8 0.38 8.2E-06 45.4 8.8 93 213-327 138-234 (301)
385 TIGR02632 RhaD_aldol-ADH rhamn 93.8 0.3 6.5E-06 51.8 9.2 42 232-274 413-454 (676)
386 PLN02336 phosphoethanolamine N 93.7 0.39 8.4E-06 48.7 9.7 96 226-324 260-369 (475)
387 PRK07984 enoyl-(acyl carrier p 93.7 0.34 7.3E-06 44.9 8.5 35 232-267 5-41 (262)
388 PRK11036 putative S-adenosyl-L 93.7 0.35 7.7E-06 44.6 8.6 89 231-323 43-148 (255)
389 PLN02214 cinnamoyl-CoA reducta 93.7 0.44 9.6E-06 46.0 9.6 74 231-305 8-90 (342)
390 PRK13256 thiopurine S-methyltr 93.7 1.2 2.7E-05 40.3 11.8 94 228-325 39-164 (226)
391 PRK06484 short chain dehydroge 93.7 0.23 4.9E-06 50.9 8.0 73 232-305 4-88 (520)
392 PRK07402 precorrin-6B methylas 93.7 0.87 1.9E-05 40.1 10.8 96 226-323 34-141 (196)
393 PRK14901 16S rRNA methyltransf 93.7 1.1 2.4E-05 44.9 12.6 96 227-324 247-384 (434)
394 PRK15409 bifunctional glyoxyla 93.7 0.22 4.7E-06 47.9 7.2 84 232-324 144-236 (323)
395 PRK07417 arogenate dehydrogena 93.7 0.42 9E-06 44.8 9.1 84 235-324 2-91 (279)
396 PRK06522 2-dehydropantoate 2-r 93.6 0.55 1.2E-05 44.3 10.0 86 235-323 2-99 (304)
397 PLN02780 ketoreductase/ oxidor 93.6 0.13 2.9E-06 49.2 5.8 42 232-274 52-93 (320)
398 PF02670 DXP_reductoisom: 1-de 93.6 0.38 8.2E-06 39.5 7.6 85 236-321 1-118 (129)
399 PRK05653 fabG 3-ketoacyl-(acyl 93.6 0.34 7.3E-06 43.7 8.3 73 232-305 4-91 (246)
400 PRK07102 short chain dehydroge 93.6 0.29 6.3E-06 44.5 7.7 39 234-273 2-40 (243)
401 PRK10901 16S rRNA methyltransf 93.6 1.1 2.4E-05 44.7 12.5 97 226-324 238-372 (427)
402 PRK14176 bifunctional 5,10-met 93.6 0.46 9.9E-06 44.5 8.9 94 213-326 143-238 (287)
403 PRK06932 glycerate dehydrogena 93.5 0.21 4.5E-06 47.8 6.9 100 232-356 146-253 (314)
404 PRK12548 shikimate 5-dehydroge 93.5 0.2 4.4E-06 47.3 6.7 73 231-305 124-208 (289)
405 PF02882 THF_DHG_CYH_C: Tetrah 93.5 0.63 1.4E-05 39.8 9.0 95 213-327 15-111 (160)
406 PRK06523 short chain dehydroge 93.5 0.29 6.3E-06 44.9 7.6 37 232-269 8-44 (260)
407 PRK12936 3-ketoacyl-(acyl-carr 93.4 0.39 8.4E-06 43.4 8.3 73 232-305 5-89 (245)
408 PLN02396 hexaprenyldihydroxybe 93.4 0.27 5.8E-06 47.2 7.4 90 230-323 129-234 (322)
409 PRK05650 short chain dehydroge 93.4 0.38 8.2E-06 44.5 8.4 70 235-305 2-86 (270)
410 PRK08594 enoyl-(acyl carrier p 93.4 0.39 8.4E-06 44.3 8.4 35 232-267 6-42 (257)
411 PRK07775 short chain dehydroge 93.4 0.37 8.1E-06 44.8 8.3 40 232-272 9-48 (274)
412 PRK12826 3-ketoacyl-(acyl-carr 93.4 0.38 8.3E-06 43.6 8.3 40 232-272 5-44 (251)
413 PRK12480 D-lactate dehydrogena 93.4 0.39 8.4E-06 46.3 8.5 83 232-325 145-235 (330)
414 PRK13581 D-3-phosphoglycerate 93.4 0.3 6.6E-06 50.1 8.2 84 232-324 139-230 (526)
415 PRK07097 gluconate 5-dehydroge 93.4 0.4 8.6E-06 44.3 8.4 73 232-305 9-96 (265)
416 PRK07340 ornithine cyclodeamin 93.4 0.26 5.7E-06 46.9 7.2 92 228-327 120-220 (304)
417 PLN02657 3,8-divinyl protochlo 93.4 0.22 4.8E-06 49.1 7.0 41 229-270 56-96 (390)
418 PRK08063 enoyl-(acyl carrier p 93.4 0.34 7.4E-06 44.1 7.8 73 232-305 3-91 (250)
419 PLN00203 glutamyl-tRNA reducta 93.3 0.37 8.1E-06 49.2 8.7 92 232-327 265-372 (519)
420 PLN02989 cinnamyl-alcohol dehy 93.3 0.33 7.1E-06 46.3 8.0 74 231-305 3-86 (325)
421 cd01075 NAD_bind_Leu_Phe_Val_D 93.3 0.69 1.5E-05 41.1 9.5 78 231-315 26-107 (200)
422 KOG1210 Predicted 3-ketosphing 93.3 0.48 1E-05 44.6 8.6 46 229-275 29-74 (331)
423 PRK06436 glycerate dehydrogena 93.3 0.28 6.1E-06 46.6 7.3 81 232-324 121-209 (303)
424 TIGR01327 PGDH D-3-phosphoglyc 93.3 0.33 7.2E-06 49.8 8.3 85 232-324 137-229 (525)
425 PF05368 NmrA: NmrA-like famil 93.3 0.24 5.2E-06 44.8 6.6 69 236-305 1-73 (233)
426 PLN02986 cinnamyl-alcohol dehy 93.2 0.38 8.2E-06 45.9 8.2 73 232-305 4-86 (322)
427 PRK14903 16S rRNA methyltransf 93.2 1.4 3E-05 44.2 12.3 97 227-325 232-367 (431)
428 PRK06487 glycerate dehydrogena 93.2 0.26 5.7E-06 47.2 7.0 79 232-324 147-233 (317)
429 TIGR01289 LPOR light-dependent 93.1 0.4 8.7E-06 45.7 8.2 41 233-274 3-44 (314)
430 PRK08703 short chain dehydroge 93.1 0.22 4.8E-06 45.1 6.2 42 232-274 5-46 (239)
431 PRK10792 bifunctional 5,10-met 93.1 1 2.2E-05 42.2 10.5 94 213-326 138-233 (285)
432 PRK06997 enoyl-(acyl carrier p 93.1 0.38 8.2E-06 44.4 7.8 73 232-305 5-93 (260)
433 PF01113 DapB_N: Dihydrodipico 93.0 0.11 2.3E-06 42.5 3.5 91 235-325 2-98 (124)
434 PRK12938 acetyacetyl-CoA reduc 93.0 0.54 1.2E-05 42.7 8.5 73 232-305 2-90 (246)
435 PRK06940 short chain dehydroge 93.0 0.79 1.7E-05 42.7 9.8 90 233-325 2-126 (275)
436 PRK07890 short chain dehydroge 92.9 0.23 5.1E-06 45.4 6.1 43 231-274 3-45 (258)
437 PRK08278 short chain dehydroge 92.9 0.51 1.1E-05 43.9 8.4 37 232-269 5-41 (273)
438 PF02254 TrkA_N: TrkA-N domain 92.9 1.1 2.4E-05 35.6 9.3 85 236-323 1-95 (116)
439 PF00106 adh_short: short chai 92.9 0.26 5.6E-06 41.8 5.9 71 234-305 1-89 (167)
440 PRK08219 short chain dehydroge 92.8 0.33 7.1E-06 43.4 6.8 71 233-305 3-80 (227)
441 PRK05855 short chain dehydroge 92.8 0.39 8.5E-06 49.6 8.2 73 232-305 314-401 (582)
442 PRK14874 aspartate-semialdehyd 92.8 0.35 7.5E-06 46.7 7.2 87 234-325 2-95 (334)
443 PRK05565 fabG 3-ketoacyl-(acyl 92.8 0.35 7.6E-06 43.8 7.0 40 233-273 5-45 (247)
444 PRK06171 sorbitol-6-phosphate 92.8 0.36 7.8E-06 44.5 7.1 38 232-270 8-45 (266)
445 PLN02306 hydroxypyruvate reduc 92.7 0.37 8.1E-06 47.4 7.4 91 232-324 164-272 (386)
446 COG0031 CysK Cysteine synthase 92.7 0.78 1.7E-05 43.2 9.1 61 224-286 53-116 (300)
447 PRK14618 NAD(P)H-dependent gly 92.6 0.55 1.2E-05 45.1 8.4 89 234-324 5-104 (328)
448 PLN00016 RNA-binding protein; 92.6 0.51 1.1E-05 46.3 8.3 90 233-324 52-164 (378)
449 PRK05708 2-dehydropantoate 2-r 92.6 0.98 2.1E-05 43.0 10.0 87 234-323 3-103 (305)
450 PRK08416 7-alpha-hydroxysteroi 92.6 0.6 1.3E-05 42.9 8.4 39 232-271 7-46 (260)
451 TIGR00446 nop2p NOL1/NOP2/sun 92.6 2.2 4.7E-05 39.7 12.0 96 227-324 66-199 (264)
452 PRK14902 16S rRNA methyltransf 92.5 1.5 3.4E-05 44.0 11.8 95 227-323 245-378 (444)
453 PRK14188 bifunctional 5,10-met 92.5 0.84 1.8E-05 43.1 9.2 94 213-327 137-233 (296)
454 PRK10669 putative cation:proto 92.5 0.99 2.2E-05 46.8 10.6 70 234-305 418-490 (558)
455 PRK07370 enoyl-(acyl carrier p 92.5 0.46 1E-05 43.8 7.4 34 232-266 5-40 (258)
456 PRK09186 flagellin modificatio 92.5 0.29 6.2E-06 44.7 6.1 42 232-274 3-44 (256)
457 PLN02896 cinnamyl-alcohol dehy 92.5 0.53 1.2E-05 45.6 8.2 74 231-305 8-88 (353)
458 PRK07066 3-hydroxybutyryl-CoA 92.5 2.4 5.1E-05 40.7 12.3 38 234-273 8-45 (321)
459 PRK14806 bifunctional cyclohex 92.5 0.65 1.4E-05 49.8 9.5 67 234-305 4-72 (735)
460 KOG1209 1-Acyl dihydroxyaceton 92.4 1.1 2.4E-05 39.9 8.9 72 233-305 7-90 (289)
461 PRK00436 argC N-acetyl-gamma-g 92.4 0.46 1E-05 46.0 7.5 92 234-326 3-101 (343)
462 COG2084 MmsB 3-hydroxyisobutyr 92.3 1.3 2.7E-05 41.7 9.9 85 235-326 2-97 (286)
463 TIGR00138 gidB 16S rRNA methyl 92.3 0.61 1.3E-05 40.7 7.5 89 232-323 42-141 (181)
464 PLN02781 Probable caffeoyl-CoA 92.3 0.97 2.1E-05 41.2 9.1 95 227-323 63-177 (234)
465 TIGR03589 PseB UDP-N-acetylglu 92.2 0.36 7.7E-06 46.3 6.5 73 232-305 3-83 (324)
466 PRK05599 hypothetical protein; 92.2 0.58 1.3E-05 42.7 7.7 69 235-305 2-86 (246)
467 PRK08945 putative oxoacyl-(acy 92.2 0.33 7.1E-06 44.2 6.0 42 230-272 9-50 (247)
468 PRK12749 quinate/shikimate deh 92.2 0.79 1.7E-05 43.2 8.6 72 232-305 123-205 (288)
469 TIGR03466 HpnA hopanoid-associ 92.2 0.2 4.3E-06 47.6 4.7 70 235-305 2-73 (328)
470 PRK07792 fabG 3-ketoacyl-(acyl 92.2 0.77 1.7E-05 43.6 8.7 35 232-267 11-45 (306)
471 PRK07578 short chain dehydroge 92.1 1.1 2.5E-05 39.2 9.3 32 235-268 2-33 (199)
472 PRK14190 bifunctional 5,10-met 92.1 0.78 1.7E-05 43.0 8.3 95 213-327 137-233 (284)
473 cd01079 NAD_bind_m-THF_DH NAD 92.1 0.97 2.1E-05 39.8 8.3 108 213-326 32-158 (197)
474 PRK14173 bifunctional 5,10-met 92.1 0.82 1.8E-05 42.9 8.4 95 213-327 134-230 (287)
475 TIGR01546 GAPDH-II_archae glyc 92.0 1.8 3.8E-05 41.7 10.8 93 236-329 1-111 (333)
476 PLN02516 methylenetetrahydrofo 92.0 0.9 1.9E-05 42.9 8.7 95 213-327 146-242 (299)
477 COG1090 Predicted nucleoside-d 92.0 0.31 6.8E-06 45.0 5.4 64 236-305 1-65 (297)
478 PRK08936 glucose-1-dehydrogena 92.0 0.75 1.6E-05 42.2 8.2 36 232-268 6-41 (261)
479 PRK07889 enoyl-(acyl carrier p 92.0 0.74 1.6E-05 42.4 8.1 35 232-267 6-42 (256)
480 COG4122 Predicted O-methyltran 92.0 1.3 2.7E-05 40.0 9.2 94 228-323 55-165 (219)
481 PRK15451 tRNA cmo(5)U34 methyl 92.0 0.65 1.4E-05 42.7 7.7 93 230-324 54-164 (247)
482 PRK05447 1-deoxy-D-xylulose 5- 91.9 0.69 1.5E-05 45.2 8.0 89 234-322 2-120 (385)
483 PRK12814 putative NADPH-depend 91.9 0.52 1.1E-05 49.8 7.9 73 231-305 191-287 (652)
484 PRK05557 fabG 3-ketoacyl-(acyl 91.9 0.88 1.9E-05 41.0 8.5 37 232-269 4-40 (248)
485 PLN02662 cinnamyl-alcohol dehy 91.9 0.52 1.1E-05 44.7 7.3 73 232-305 3-85 (322)
486 PRK14106 murD UDP-N-acetylmura 91.9 0.68 1.5E-05 46.5 8.4 69 232-305 4-77 (450)
487 PRK09134 short chain dehydroge 91.9 0.89 1.9E-05 41.7 8.6 73 232-305 8-96 (258)
488 PLN02427 UDP-apiose/xylose syn 91.9 0.59 1.3E-05 45.9 7.8 75 231-305 12-95 (386)
489 PRK09135 pteridine reductase; 91.9 0.91 2E-05 41.0 8.6 35 232-267 5-39 (249)
490 PRK08955 glyceraldehyde-3-phos 91.9 2 4.3E-05 41.4 11.0 92 235-327 4-122 (334)
491 TIGR02622 CDP_4_6_dhtase CDP-g 91.8 0.39 8.5E-06 46.4 6.4 38 232-270 3-40 (349)
492 PRK08300 acetaldehyde dehydrog 91.8 0.69 1.5E-05 43.7 7.7 88 234-323 5-100 (302)
493 PRK14982 acyl-ACP reductase; P 91.8 0.38 8.3E-06 46.3 6.1 91 231-326 153-248 (340)
494 PLN02366 spermidine synthase 91.8 0.84 1.8E-05 43.5 8.4 91 231-324 90-206 (308)
495 PRK12744 short chain dehydroge 91.8 0.96 2.1E-05 41.4 8.7 34 232-266 7-40 (257)
496 PRK13656 trans-2-enoyl-CoA red 91.8 0.81 1.8E-05 44.8 8.3 34 231-266 39-74 (398)
497 KOG1252 Cystathionine beta-syn 91.8 0.75 1.6E-05 43.7 7.7 58 226-284 96-156 (362)
498 COG0144 Sun tRNA and rRNA cyto 91.7 2.2 4.7E-05 41.6 11.4 98 226-325 150-289 (355)
499 PRK12921 2-dehydropantoate 2-r 91.7 1.3 2.9E-05 41.8 9.8 86 235-323 2-101 (305)
500 PRK06141 ornithine cyclodeamin 91.7 1.1 2.4E-05 42.7 9.3 93 230-326 122-221 (314)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=8.4e-55 Score=407.26 Aligned_cols=302 Identities=32% Similarity=0.477 Sum_probs=263.6
Q ss_pred CcceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCC
Q 016265 81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQ 160 (392)
Q Consensus 81 p~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~ 160 (392)
+.+|||+++.+++++ ++++ +++.|+|+++||+|+|.|||+|++|+|.++|.++. ..+|.++|||.+|+|+++|++
T Consensus 1 ~~~mkA~~~~~~~~p--l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~--~~~P~ipGHEivG~V~~vG~~ 75 (339)
T COG1064 1 MMTMKAAVLKKFGQP--LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV--PKLPLIPGHEIVGTVVEVGEG 75 (339)
T ss_pred CcceEEEEEccCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC--CCCCccCCcceEEEEEEecCC
Confidence 357999999999987 7778 89999999999999999999999999999999965 349999999999999999999
Q ss_pred CCCCCCCCEEEe-cccc------------------cccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHH
Q 016265 161 VKEFKEGDEVYG-DINE------------------KALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETA 221 (392)
Q Consensus 161 v~~~~vGdrV~~-~~~~------------------~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta 221 (392)
|++|++||||.. +... ....+...+|+|+||+++++.+++++|+++++++||.+.|++.|+
T Consensus 76 V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~ 155 (339)
T COG1064 76 VTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITT 155 (339)
T ss_pred CccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeE
Confidence 999999999965 2110 112445578999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcc-ccCCCCccEE
Q 016265 222 YEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNF-EDLPEKFDVV 300 (392)
Q Consensus 222 ~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~-~~~~~~~D~v 300 (392)
|++|++.+++||++|+|+| .|++|++++|+||++ |++|++++++++|+++++++|+|++++..+++. +...+.+|++
T Consensus 156 y~alk~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~i 233 (339)
T COG1064 156 YRALKKANVKPGKWVAVVG-AGGLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAI 233 (339)
T ss_pred eeehhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEE
Confidence 9999999999999999998 889999999999995 999999999999999999999999999765443 3344459999
Q ss_pred EecCc--cHHHHHHhcccCCeEEEEcCCC-CC-Cce------------EEEEeecHHHHHHHHHHHHCCCcccccCCCcc
Q 016265 301 YDAIG--QCDRAVKAIKEGGTVVALTGAV-TP-PGF------------RFVVTSNGEVLKKLNPYLESGKVKPIIDPKGP 364 (392)
Q Consensus 301 id~~G--~~~~~~~~l~~~G~iv~~g~~~-~~-~~~------------~~~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~ 364 (392)
||+++ .++.++++|+++|+++.+|... .+ ..+ .-++.....++++++++..+|++++.+. +.
T Consensus 234 i~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~--e~ 311 (339)
T COG1064 234 IDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEIL--ET 311 (339)
T ss_pred EECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEE--ee
Confidence 99998 4689999999999999999873 22 111 1123345788999999999999999853 58
Q ss_pred cchhhHHHHHHHHHhCCCCeeEEEEeC
Q 016265 365 FPFSQVVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 365 ~~l~~~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
++++|+++||+.|++++..|+.||.+.
T Consensus 312 ~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 312 IPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred ECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 999999999999999999999999864
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=6.4e-49 Score=375.35 Aligned_cols=296 Identities=41% Similarity=0.628 Sum_probs=253.8
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||++++.+.+.++.++++ |++.|.|++|||||||.++|||+.|...++|..+ ...++|+++|.|++|+|+++|++|++
T Consensus 1 mka~~~~~~g~~~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~-~~~~~P~i~G~d~aG~V~avG~~V~~ 78 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAP-PVRPLPFIPGSEAAGVVVAVGSGVTG 78 (326)
T ss_pred CeEEEEeccCCCceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCCC-CCCCCCCcccceeEEEEEEeCCCCCC
Confidence 799999999988779999 9999999999999999999999999999999722 33568999999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGS 242 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~ 242 (392)
|++||||+.... . + .+|+|+||+.++++.++++|+++++++||+++++++|||++|. ..++++|++|||+||+
T Consensus 79 ~~~GdrV~~~~~-~---~--~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaa 152 (326)
T COG0604 79 FKVGDRVAALGG-V---G--RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAA 152 (326)
T ss_pred cCCCCEEEEccC-C---C--CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCC
Confidence 999999999741 0 0 3699999999999999999999999999999999999999996 4889999999999999
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccC------CCCccEEEecCc--cHHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~------~~~~D~vid~~G--~~~~~~~~l 314 (392)
|++|++++|+||++ |+.+++++.++++.++++++|+|++++|.++++.+. ++++|+|||++| .+..++++|
T Consensus 153 GgVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l 231 (326)
T COG0604 153 GGVGSAAIQLAKAL-GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAAL 231 (326)
T ss_pred chHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHh
Confidence 99999999999995 888888888888888999999999999998877553 347999999999 468899999
Q ss_pred ccCCeEEEEcCCCC-CC-ce----------EE---EEeec-----HHHHHHHHHHHHCCCcccccCCCcccchhhHHHHH
Q 016265 315 KEGGTVVALTGAVT-PP-GF----------RF---VVTSN-----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAF 374 (392)
Q Consensus 315 ~~~G~iv~~g~~~~-~~-~~----------~~---~~~~~-----~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~ 374 (392)
+++|+++.+|.... +. .+ .. ..... .+.++++.+++++|.+++.+. .+|||+|..++.
T Consensus 232 ~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~--~~~~l~e~~~a~ 309 (326)
T COG0604 232 APGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVID--RVYPLAEAPAAA 309 (326)
T ss_pred ccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceec--cEechhhhHHHH
Confidence 99999999987551 11 01 00 11112 567888999999999999855 789999976666
Q ss_pred HHHHhC-CCCeeEEEEe
Q 016265 375 SYIETN-KATGKVVIHP 390 (392)
Q Consensus 375 ~~l~~~-~~~gKvvl~~ 390 (392)
.+...+ +..||+||++
T Consensus 310 a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 310 AHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHcccCCcceEEEeC
Confidence 655555 7889999975
No 3
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-48 Score=355.32 Aligned_cols=304 Identities=25% Similarity=0.333 Sum_probs=252.1
Q ss_pred CcceeEEEEcccCCcceEEEeccccCCCC-CCCeEEEEEeEEecChHhHHhhcCCC-CCCCCCCCCcCCCceeEEEEEeC
Q 016265 81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKF-KATDSPLPTVPGYDVAGVVVKVG 158 (392)
Q Consensus 81 p~~mka~v~~~~~~~~~l~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~v~G~e~~G~V~~vG 158 (392)
..+|+|+++.+.++ ++++ +.|.|++ .|+||+|++.++|||++|+|.+.... .....+.|+++|||.+|+|.++|
T Consensus 2 ~~~~~A~vl~g~~d---i~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG 77 (354)
T KOG0024|consen 2 AADNLALVLRGKGD---IRIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG 77 (354)
T ss_pred CcccceeEEEccCc---eeEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence 35689999998888 7888 8999988 99999999999999999999986542 22334579999999999999999
Q ss_pred CCCCCCCCCCEEEeccc------------cccc-------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhcc-chhH
Q 016265 159 TQVKEFKEGDEVYGDIN------------EKAL-------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGL-PLAI 218 (392)
Q Consensus 159 ~~v~~~~vGdrV~~~~~------------~~~~-------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l-~~~~ 218 (392)
+.|+++++||||+.-+. .|++ .-+..+|++++|++.++++|+++||+++++++|.+ | +
T Consensus 78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP--L 155 (354)
T KOG0024|consen 78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP--L 155 (354)
T ss_pred ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccc--h
Confidence 99999999999976432 1111 22335799999999999999999999999999977 5 4
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCc-cccC---
Q 016265 219 ETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDN-FEDL--- 293 (392)
Q Consensus 219 ~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~-~~~~--- 293 (392)
..++||.+++++++|++|||+| +|++|+++...||.+ |+ +|++++..+.|++.++++|++.+.+..... .+++
T Consensus 156 sV~~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~-GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~ 233 (354)
T KOG0024|consen 156 SVGVHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAM-GASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAEL 233 (354)
T ss_pred hhhhhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHc-CCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHH
Confidence 5599999999999999999998 999999999999995 77 566777899999999999999988765433 2221
Q ss_pred -----C-CCccEEEecCc---cHHHHHHhcccCCeEEEEcCCCCCCce------------EEEEeecHHHHHHHHHHHHC
Q 016265 294 -----P-EKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF------------RFVVTSNGEVLKKLNPYLES 352 (392)
Q Consensus 294 -----~-~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~ 352 (392)
+ ..+|++|||+| .++.++.+++.+|++++.++......| .-.++.....+..+++++++
T Consensus 234 v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~s 313 (354)
T KOG0024|consen 234 VEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSS 313 (354)
T ss_pred HHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHc
Confidence 1 34999999999 469999999999998888765432222 22334445689999999999
Q ss_pred CCcccccCCCcccchhhHHHHHHHHHhCCCC-eeEEEEeCC
Q 016265 353 GKVKPIIDPKGPFPFSQVVEAFSYIETNKAT-GKVVIHPIP 392 (392)
Q Consensus 353 g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~-gKvvl~~~p 392 (392)
|+++...++|++|+++++.+||+.+.+++.. -|+++.+++
T Consensus 314 Gki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 314 GKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred CCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 9999999999999999999999999998853 499988764
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-47 Score=344.78 Aligned_cols=306 Identities=27% Similarity=0.386 Sum_probs=253.8
Q ss_pred CCCCCcceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEE
Q 016265 77 VGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVK 156 (392)
Q Consensus 77 ~~~~p~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~ 156 (392)
.+.+|.++++|.+..++.....++. +++.|+++++||+|+|+|||||++|+|.+.|.++. ..+|.++|||.+|+|++
T Consensus 3 ~~~~p~k~~g~~~~~~~G~l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~--s~~PlV~GHEiaG~Vvk 79 (360)
T KOG0023|consen 3 SMSIPEKQFGWAARDPSGVLSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL--SKYPLVPGHEIAGVVVK 79 (360)
T ss_pred cccCchhhEEEEEECCCCCCCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc--ccCCccCCceeeEEEEE
Confidence 3467889999999988886556777 89999999999999999999999999999999965 78999999999999999
Q ss_pred eCCCCCCCCCCCEEEec-----c--c-------------------ccccCCCCCCCcceeEEEecCCceeeCCCCCCHHh
Q 016265 157 VGTQVKEFKEGDEVYGD-----I--N-------------------EKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQ 210 (392)
Q Consensus 157 vG~~v~~~~vGdrV~~~-----~--~-------------------~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~ 210 (392)
+|++|++|++||||-.- + . ....+|.-..|+|++|+++++.+++++|++++.+.
T Consensus 80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~ 159 (360)
T KOG0023|consen 80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLAS 159 (360)
T ss_pred ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhh
Confidence 99999999999998210 0 0 11123333456699999999999999999999999
Q ss_pred HhccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc-ccHHHHHhcCCcEEEeCC-CC
Q 016265 211 AAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST-RNLEFLKSLGADLAIDYT-KD 288 (392)
Q Consensus 211 aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~-~~~~~~~~~G~~~vi~~~-~~ 288 (392)
||.+.|+..|+|.+|...++.||++|.|.| +|++|.+++|+||++ |.+|+++++++ +|.+.++.+|||..++.. +.
T Consensus 160 aAPlLCaGITvYspLk~~g~~pG~~vgI~G-lGGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~ 237 (360)
T KOG0023|consen 160 AAPLLCAGITVYSPLKRSGLGPGKWVGIVG-LGGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP 237 (360)
T ss_pred ccchhhcceEEeehhHHcCCCCCcEEEEec-CcccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence 999999999999999999999999999999 666999999999995 99999999987 556666789999999876 44
Q ss_pred ccc-cCCCCccEEEecCc-----cHHHHHHhcccCCeEEEEcCCCCCCceE---EEE---------eecHHHHHHHHHHH
Q 016265 289 NFE-DLPEKFDVVYDAIG-----QCDRAVKAIKEGGTVVALTGAVTPPGFR---FVV---------TSNGEVLKKLNPYL 350 (392)
Q Consensus 289 ~~~-~~~~~~D~vid~~G-----~~~~~~~~l~~~G~iv~~g~~~~~~~~~---~~~---------~~~~~~~~~~~~~l 350 (392)
++. +..+-.|..+|++. .++.++++++++|++|.+|.+..+..++ +++ -......+++++++
T Consensus 238 d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~ 317 (360)
T KOG0023|consen 238 DIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFV 317 (360)
T ss_pred HHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHH
Confidence 443 23333455555543 5799999999999999999887433221 111 12456789999999
Q ss_pred HCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 351 ESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 351 ~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
..|.++..+ +..+++++++||++|++++..++.|++.
T Consensus 318 a~~~ik~~I---E~v~~~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 318 ARGLIKSPI---ELVKLSEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred HcCCCcCce---EEEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence 999998774 5789999999999999999999998875
No 5
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=8.3e-47 Score=330.85 Aligned_cols=298 Identities=34% Similarity=0.496 Sum_probs=263.6
Q ss_pred CCcceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCC
Q 016265 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGT 159 (392)
Q Consensus 80 ~p~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~ 159 (392)
.|...|.+++++.|..++++++ +.|.|+|.|+|++||..|+|+|..|..+++|.+. ..+.|.++|-|.+|+|+++|+
T Consensus 5 ~p~~~k~i~v~e~Ggydvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~--~~plPytpGmEaaGvVvAvG~ 81 (336)
T KOG1197|consen 5 SPPLLKCIVVTEFGGYDVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD--PAPLPYTPGMEAAGVVVAVGE 81 (336)
T ss_pred CCchheEEEEeccCCcceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC--CCCCCcCCCcccceEEEEecC
Confidence 4556799999999999999999 9999999999999999999999999999999984 467899999999999999999
Q ss_pred CCCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEE
Q 016265 160 QVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILV 238 (392)
Q Consensus 160 ~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI 238 (392)
+|+++++||||+-.. ..|.|+|+..+|...+.++|+.+++++||++.+.++|||.-++ -.++++|++|||
T Consensus 82 gvtdrkvGDrVayl~---------~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlv 152 (336)
T KOG1197|consen 82 GVTDRKVGDRVAYLN---------PFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLV 152 (336)
T ss_pred CccccccccEEEEec---------cchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 999999999998754 3799999999999999999999999999999999999999985 468999999999
Q ss_pred EcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccC------CCCccEEEecCc--cHHHH
Q 016265 239 LNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRA 310 (392)
Q Consensus 239 ~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~------~~~~D~vid~~G--~~~~~ 310 (392)
+.|+|++|++++|++|.. |+.+|.+.++++|++.+++.|+.|.|+++.+++.+. ++|+|+++|.+| .+...
T Consensus 153 haAAGGVGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~s 231 (336)
T KOG1197|consen 153 HAAAGGVGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKS 231 (336)
T ss_pred EeccccHHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHH
Confidence 999999999999999995 999999999999999999999999999999887542 578999999999 57899
Q ss_pred HHhcccCCeEEEEcCCCC-CCceEE----------E----Ee--ecH----HHHHHHHHHHHCCCcccccCCCcccchhh
Q 016265 311 VKAIKEGGTVVALTGAVT-PPGFRF----------V----VT--SNG----EVLKKLNPYLESGKVKPIIDPKGPFPFSQ 369 (392)
Q Consensus 311 ~~~l~~~G~iv~~g~~~~-~~~~~~----------~----~~--~~~----~~~~~~~~~l~~g~l~~~~~~t~~~~l~~ 369 (392)
+.+|+++|.+|.+|.... ...+++ . +. ..+ ....+++.++.+|.+++.+ .|+|||++
T Consensus 232 l~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I--~~~ypls~ 309 (336)
T KOG1197|consen 232 LAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHI--DHVYPLSK 309 (336)
T ss_pred HHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceee--eeecchHH
Confidence 999999999999987651 111111 1 00 011 1346778888999999875 48999999
Q ss_pred HHHHHHHHHhCCCCeeEEEEeCC
Q 016265 370 VVEAFSYIETNKATGKVVIHPIP 392 (392)
Q Consensus 370 ~~~A~~~l~~~~~~gKvvl~~~p 392 (392)
+.+|...+++++..||+++.+.|
T Consensus 310 vadA~~diesrktvGkvlLlp~~ 332 (336)
T KOG1197|consen 310 VADAHADIESRKTVGKVLLLPGP 332 (336)
T ss_pred HHHHHHHHHhhhccceEEEeCCc
Confidence 99999999999999999999876
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=2.5e-46 Score=342.94 Aligned_cols=298 Identities=25% Similarity=0.347 Sum_probs=252.3
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
++||.+..+++++ |+++ ++.+++|++|||+||+.++|+|++|++..+|..|. .+|.++|||++|+|++||++|+
T Consensus 2 k~~aAV~~~~~~P--l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~---~~P~vLGHEgAGiVe~VG~gVt 75 (366)
T COG1062 2 KTRAAVAREAGKP--LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE---GFPAVLGHEGAGIVEAVGEGVT 75 (366)
T ss_pred CceEeeeecCCCC--eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC---CCceecccccccEEEEecCCcc
Confidence 4789999888888 8888 89999999999999999999999999999999763 3899999999999999999999
Q ss_pred CCCCCCEEEecccccc--------------------------cCCC-----------CCC--CcceeEEEecCCceeeCC
Q 016265 163 EFKEGDEVYGDINEKA--------------------------LEGP-----------KQF--GSLAEYTAVEERLLAPKP 203 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~--------------------------~~~~-----------~~~--G~~a~~~~v~~~~~~~iP 203 (392)
++++||+|+..+...+ .+|. +.. ++|+||.++++.++++++
T Consensus 76 ~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~ 155 (366)
T COG1062 76 SVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKID 155 (366)
T ss_pred ccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECC
Confidence 9999999976543100 0110 112 499999999999999999
Q ss_pred CCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcE
Q 016265 204 KNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADL 281 (392)
Q Consensus 204 ~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~ 281 (392)
++.+++.++.+.|+..|++-+. +.+++++|++|.|+| .|++|++++|-|+.. |+. +|+++.+++|++++++||+++
T Consensus 156 ~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~a-gA~~IiAvD~~~~Kl~~A~~fGAT~ 233 (366)
T COG1062 156 PDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAA-GAGRIIAVDINPEKLELAKKFGATH 233 (366)
T ss_pred CCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHc-CCceEEEEeCCHHHHHHHHhcCCce
Confidence 9999999999999999999976 678999999999998 999999999999995 875 556678999999999999999
Q ss_pred EEeCCCCc-ccc----C-CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCC-----ceEEEEe----------
Q 016265 282 AIDYTKDN-FED----L-PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP-----GFRFVVT---------- 337 (392)
Q Consensus 282 vi~~~~~~-~~~----~-~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~-----~~~~~~~---------- 337 (392)
++|..+.. ..+ + ..|+|.+|||+|. +++++++..++|+.+.+|...... .++++..
T Consensus 234 ~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~ 313 (366)
T COG1062 234 FVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGG 313 (366)
T ss_pred eecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecC
Confidence 99987763 332 3 3499999999994 689999999999999998765222 2222211
Q ss_pred -ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 338 -SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 338 -~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
.-..++.+++++..+|+++...++|+.++|+|+++||+.|.+|+.. |-||+
T Consensus 314 ~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 314 ARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred CccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 1145789999999999999999999999999999999999999986 66654
No 7
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.7e-44 Score=347.10 Aligned_cols=300 Identities=21% Similarity=0.341 Sum_probs=241.4
Q ss_pred CcceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhc-CCCCCCCCCCCCcCCCceeEEEEEeCC
Q 016265 81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ-GKFKATDSPLPTVPGYDVAGVVVKVGT 159 (392)
Q Consensus 81 p~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~~~~~~p~v~G~e~~G~V~~vG~ 159 (392)
...||+.++..++. ++++ +.+.| ++++||||||.++|||++|++.+. |.++.....+|.++|||++|+|+++
T Consensus 2 ~~~~~~~~~~~~~~---~~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v-- 74 (343)
T PRK09880 2 QVKTQSCVVAGKKD---VAVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS-- 74 (343)
T ss_pred cccceEEEEecCCc---eEEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--
Confidence 34579999987776 7777 78887 689999999999999999999875 4432222457899999999999999
Q ss_pred CCCCCCCCCEEEecccccc------------------cCC-----CCCCCcceeEEEecCCceeeCCCCCCHHhHhccch
Q 016265 160 QVKEFKEGDEVYGDINEKA------------------LEG-----PKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPL 216 (392)
Q Consensus 160 ~v~~~~vGdrV~~~~~~~~------------------~~~-----~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~ 216 (392)
+|++|++||||+......+ ..| ...+|+|+||++++++.++++|+++++++++ +..
T Consensus 75 ~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~ 153 (343)
T PRK09880 75 DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAE 153 (343)
T ss_pred cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhc
Confidence 7889999999986421100 001 1246999999999999999999999998665 445
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCccccC--
Q 016265 217 AIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL-- 293 (392)
Q Consensus 217 ~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~-- 293 (392)
++.+||+++++....+|++|+|+| +|++|++++|+||.+ |+ ++++++++++|+++++++|+++++|++++++.+.
T Consensus 154 ~~~~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~-G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~ 231 (343)
T PRK09880 154 PLAVAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKA 231 (343)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhc
Confidence 667899999888878999999998 699999999999995 98 5777888999999999999999999877655432
Q ss_pred -CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCce----------EEEE-eecHHHHHHHHHHHHCCCcccc
Q 016265 294 -PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPGF----------RFVV-TSNGEVLKKLNPYLESGKVKPI 358 (392)
Q Consensus 294 -~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~~----------~~~~-~~~~~~~~~~~~~l~~g~l~~~ 358 (392)
.+++|++|||+|. ++.++++++++|+++.+|.......+ .... ....+.++++++++++|++++.
T Consensus 232 ~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~ 311 (343)
T PRK09880 232 EKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPL 311 (343)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCch
Confidence 2359999999994 57899999999999999864422111 1110 1124578999999999999886
Q ss_pred cCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 359 IDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 359 ~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
..++++|+|+|+++||+.+.+++..||+++.+
T Consensus 312 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 312 PLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred hheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 66789999999999999999988789999875
No 8
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=8.2e-44 Score=344.02 Aligned_cols=299 Identities=28% Similarity=0.360 Sum_probs=247.7
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++. ++++ +++.|.|+++||+||+.++|||++|++.+.|.+.. ...+|.++|||++|+|+++|++|++
T Consensus 1 mka~~~~~~~~---l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~ 75 (339)
T cd08239 1 MRGAVFPGDRT---VELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA-PAYQGVIPGHEPAGVVVAVGPGVTH 75 (339)
T ss_pred CeEEEEecCCc---eEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc-cCCCCceeccCceEEEEEECCCCcc
Confidence 79999986554 7888 89999999999999999999999999988776432 2235789999999999999999999
Q ss_pred CCCCCEEEecccccc-------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 164 FKEGDEVYGDINEKA-------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~-------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
+++||+|+......+ ..|...+|+|+||+.++...++++|+++++++++.+++++.|||++
T Consensus 76 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~ 155 (339)
T cd08239 76 FRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHA 155 (339)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 999999987542110 0122346999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc---C--CCCcc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED---L--PEKFD 298 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~---~--~~~~D 298 (392)
++++.+++|++|+|+| +|++|++++|+||. .|++ +++++++++|+++++++|+++++++++++... . .+++|
T Consensus 156 l~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~-~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d 233 (339)
T cd08239 156 LRRVGVSGRDTVLVVG-AGPVGLGALMLARA-LGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGAD 233 (339)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCC
Confidence 9888899999999997 69999999999999 5998 88888899999999999999999987644211 1 24799
Q ss_pred EEEecCcc---HHHHHHhcccCCeEEEEcCCCCCC-c---------eEEE--EeecHHHHHHHHHHHHCCCcccccCCCc
Q 016265 299 VVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP-G---------FRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKG 363 (392)
Q Consensus 299 ~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~-~---------~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~ 363 (392)
++|||+|. ++.++++++++|+++.+|...... . +.+. .....+.++++++++.+|++++...+++
T Consensus 234 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~ 313 (339)
T cd08239 234 VAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVTH 313 (339)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEEE
Confidence 99999984 367899999999999998643210 0 1111 1123467899999999999987666789
Q ss_pred ccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 364 PFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 364 ~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+|+++|+++||+.++++. .||+|+++
T Consensus 314 ~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 314 RFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred EecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 999999999999998875 69999875
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=7.9e-44 Score=348.42 Aligned_cols=299 Identities=25% Similarity=0.324 Sum_probs=247.3
Q ss_pred eeEEEEcccCC------cceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEe
Q 016265 84 MKAWLYGEYGG------VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKV 157 (392)
Q Consensus 84 mka~v~~~~~~------~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~v 157 (392)
|||+++.++|. ++.++++ +++.|+|+++||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~GhE~~G~V~~v 76 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP---RPLPMALGHEAAGVVVEV 76 (371)
T ss_pred CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC---CCCCccCCccceeEEEEe
Confidence 79999998875 3668888 8999999999999999999999999999988753 346899999999999999
Q ss_pred CCCCCCCCCCCEEEeccccc------ccC---------------CC------------------CCCCcceeEEEecCCc
Q 016265 158 GTQVKEFKEGDEVYGDINEK------ALE---------------GP------------------KQFGSLAEYTAVEERL 198 (392)
Q Consensus 158 G~~v~~~~vGdrV~~~~~~~------~~~---------------~~------------------~~~G~~a~~~~v~~~~ 198 (392)
|++|+++++||||++..... +.. |. ...|+|+||+.+++..
T Consensus 77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence 99999999999998742110 000 00 0137999999999999
Q ss_pred eeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHh
Q 016265 199 LAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKS 276 (392)
Q Consensus 199 ~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~ 276 (392)
++++|+++++++++.+++++.|||+++ +.+++++|++|+|+| +|++|++++|+||. .|+ ++++++.+++|++++++
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~-~G~~~Vi~~~~~~~r~~~a~~ 234 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVA-AGASQVVAVDLNEDKLALARE 234 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCcEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999997 568899999999998 79999999999998 499 57788889999999999
Q ss_pred cCCcEEEeCCCCcccc----C-CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCC--ce----------EEE-
Q 016265 277 LGADLAIDYTKDNFED----L-PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP--GF----------RFV- 335 (392)
Q Consensus 277 ~G~~~vi~~~~~~~~~----~-~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~--~~----------~~~- 335 (392)
+|+++++++.++++.+ . .+++|++|||+|. ++.++++++++|+++.+|...... .+ .+.
T Consensus 235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 314 (371)
T cd08281 235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKG 314 (371)
T ss_pred cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence 9999999987655422 1 3379999999983 588999999999999998653211 11 111
Q ss_pred -Eee---cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 336 -VTS---NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 336 -~~~---~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
... ..+.+.++++++++|++++...+++.|+|+|+++||+.+++++..+|+|+
T Consensus 315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred EecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 111 24678899999999999877677899999999999999999988877664
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.7e-43 Score=342.15 Aligned_cols=307 Identities=22% Similarity=0.269 Sum_probs=249.1
Q ss_pred CCCCCcceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEE
Q 016265 77 VGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVK 156 (392)
Q Consensus 77 ~~~~p~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~ 156 (392)
+++.|.+|||+++.++++. +.++ +++.|.|+++||+|||.++|||++|++.+.|.++. ...+|.++|||++|+|++
T Consensus 4 ~~~~~~~mka~~~~~~~~~--~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~~p~i~GhE~~G~V~~ 79 (381)
T PLN02740 4 TQGKVITCKAAVAWGPGEP--LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA-QRAYPRILGHEAAGIVES 79 (381)
T ss_pred ccccceeeEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc-cCCCCccccccceEEEEE
Confidence 3445667999999887754 6677 89999999999999999999999999999987532 235789999999999999
Q ss_pred eCCCCCCCCCCCEEEecccccc------cC---------------------C---------------CCCCCcceeEEEe
Q 016265 157 VGTQVKEFKEGDEVYGDINEKA------LE---------------------G---------------PKQFGSLAEYTAV 194 (392)
Q Consensus 157 vG~~v~~~~vGdrV~~~~~~~~------~~---------------------~---------------~~~~G~~a~~~~v 194 (392)
+|+++++|++||||++.....+ .. + ....|+|+||+++
T Consensus 80 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v 159 (381)
T PLN02740 80 VGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVL 159 (381)
T ss_pred eCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEE
Confidence 9999999999999987532100 00 0 0025899999999
Q ss_pred cCCceeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHH
Q 016265 195 EERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLE 272 (392)
Q Consensus 195 ~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~ 272 (392)
+.+.++++|+++++++++.+++++.|||+++ +.+++++|++|||+| +|++|++++|+||. .|+ +|++++++++|++
T Consensus 160 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~-~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 160 DSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARA-RGASKIIGVDINPEKFE 237 (381)
T ss_pred ehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHH-CCCCcEEEEcCChHHHH
Confidence 9999999999999999999999999999987 568899999999998 79999999999999 598 5888889999999
Q ss_pred HHHhcCCcEEEeCCCCc--ccc----C-CCCccEEEecCcc---HHHHHHhcccC-CeEEEEcCCCCCCc----------
Q 016265 273 FLKSLGADLAIDYTKDN--FED----L-PEKFDVVYDAIGQ---CDRAVKAIKEG-GTVVALTGAVTPPG---------- 331 (392)
Q Consensus 273 ~~~~~G~~~vi~~~~~~--~~~----~-~~~~D~vid~~G~---~~~~~~~l~~~-G~iv~~g~~~~~~~---------- 331 (392)
.++++|+++++|+.+.+ +.+ . .+++|++||++|. +..++++++++ |+++.+|....+..
T Consensus 238 ~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~ 317 (381)
T PLN02740 238 KGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFD 317 (381)
T ss_pred HHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhc
Confidence 99999999999876532 322 2 2379999999994 58899999997 99999986542211
Q ss_pred -eEEE--Ee-e--cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 332 -FRFV--VT-S--NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 332 -~~~~--~~-~--~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
..+. .. . ....+.++++++.+|++++...++++|+|+|+++||+.+++++. .|++|+.
T Consensus 318 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 318 GRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred CCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 1111 10 1 13568899999999999876667899999999999999998876 5998863
No 11
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.1e-42 Score=334.67 Aligned_cols=291 Identities=23% Similarity=0.279 Sum_probs=240.4
Q ss_pred EEEEcccCCc--ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 86 AWLYGEYGGV--DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 86 a~v~~~~~~~--~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|+.+.+++.+ ..++++ +.|.|.|+++||+||+.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++
T Consensus 1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 77 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV--HRPRVTPGHEVVGEVAGRGADAGG 77 (329)
T ss_pred CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC--CCCCccCCcceEEEEEEECCCCcc
Confidence 3566666654 458888 89999999999999999999999999999987642 234789999999999999999999
Q ss_pred CCCCCEEEeccc-----c--------------cccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 164 FKEGDEVYGDIN-----E--------------KALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 164 ~~vGdrV~~~~~-----~--------------~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
|++||||+.... . ....|...+|+|+||+.++...++++|+++++++++.+++++.|||++
T Consensus 78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~ 157 (329)
T TIGR02822 78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA 157 (329)
T ss_pred cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence 999999974211 0 001122346999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecC
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
+.++++++|++|||+| +|++|++++|+||. .|+++++++++++|+++++++|+++++++.+.. .+++|+++++.
T Consensus 158 ~~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~-~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~ 231 (329)
T TIGR02822 158 LLRASLPPGGRLGLYG-FGGSAHLTAQVALA-QGATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFA 231 (329)
T ss_pred HHhcCCCCCCEEEEEc-CCHHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECC
Confidence 9888999999999999 59999999999999 599988899999999999999999999864321 24689999887
Q ss_pred c---cHHHHHHhcccCCeEEEEcCCC-CCCce----------EE--EEeecHHHHHHHHHHHHCCCcccccCCCcccchh
Q 016265 305 G---QCDRAVKAIKEGGTVVALTGAV-TPPGF----------RF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFS 368 (392)
Q Consensus 305 G---~~~~~~~~l~~~G~iv~~g~~~-~~~~~----------~~--~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~ 368 (392)
+ .+..++++++++|+++.+|... ....+ .+ ........+.++++++++|++++ ++++|+|+
T Consensus 232 ~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~---i~~~~~l~ 308 (329)
T TIGR02822 232 PAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRV---TTHTYPLS 308 (329)
T ss_pred CcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCee---EEEEEeHH
Confidence 6 4689999999999999998642 11111 11 11123566888999999999874 36899999
Q ss_pred hHHHHHHHHHhCCCCeeEEE
Q 016265 369 QVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 369 ~~~~A~~~l~~~~~~gKvvl 388 (392)
|+++||+.+++++..||+||
T Consensus 309 ~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 309 EADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHcCCCceEEEe
Confidence 99999999999999999987
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.3e-42 Score=338.29 Aligned_cols=298 Identities=23% Similarity=0.280 Sum_probs=245.7
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
+|||+++++++.+ ++++ +.+.|+|+++||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|++|+
T Consensus 1 ~mka~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~ 74 (358)
T TIGR03451 1 TVRGVIARSKGAP--VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN---DEFPFLLGHEAAGVVEAVGEGVT 74 (358)
T ss_pred CcEEEEEccCCCC--CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc---ccCCcccccceEEEEEEeCCCCc
Confidence 5999999998875 6777 8999999999999999999999999999988753 24688999999999999999999
Q ss_pred CCCCCCEEEeccccc------cc--------------------CCC-----CCCCcceeEEEecCCceeeCCCCCCHHhH
Q 016265 163 EFKEGDEVYGDINEK------AL--------------------EGP-----KQFGSLAEYTAVEERLLAPKPKNLDFVQA 211 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~------~~--------------------~~~-----~~~G~~a~~~~v~~~~~~~iP~~l~~~~a 211 (392)
+|++||||++..... +. .|. ...|+|+||+.+++..++++|++++++++
T Consensus 75 ~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~a 154 (358)
T TIGR03451 75 DVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAA 154 (358)
T ss_pred ccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHh
Confidence 999999998632110 00 000 12589999999999999999999999999
Q ss_pred hccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCc
Q 016265 212 AGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDN 289 (392)
Q Consensus 212 a~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~ 289 (392)
+.+++++.|+|+++ +.+.+++|++|||+| +|++|++++|+||. .|++ +++++++++|+++++++|+++++++.+.+
T Consensus 155 a~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~-~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~ 232 (358)
T TIGR03451 155 GLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAAL-AGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD 232 (358)
T ss_pred hhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence 99998888999887 467899999999997 79999999999998 5985 77788899999999999999999987655
Q ss_pred ccc----C--CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCC--Cc----------eEEEEe-----ecHHHH
Q 016265 290 FED----L--PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTP--PG----------FRFVVT-----SNGEVL 343 (392)
Q Consensus 290 ~~~----~--~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~--~~----------~~~~~~-----~~~~~~ 343 (392)
+.+ . ..++|++|||+|. ++.++++++++|+++.+|..... .. ..+... ...+.+
T Consensus 233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 312 (358)
T TIGR03451 233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF 312 (358)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence 422 2 2479999999983 57899999999999999865321 11 111111 125678
Q ss_pred HHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 344 KKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 344 ~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
+++++++++|++++...++++|+++|+.+||+.+++++.. |+++.
T Consensus 313 ~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 313 PMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 8999999999998766678999999999999999988775 77764
No 13
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2.4e-42 Score=336.33 Aligned_cols=300 Identities=21% Similarity=0.319 Sum_probs=238.5
Q ss_pred CcceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCC
Q 016265 81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQ 160 (392)
Q Consensus 81 p~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~ 160 (392)
|.+++++...+.. +.+++. +++.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus 10 ~~~~~~~~~~~~~--~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~p~i~GhE~~G~V~~vG~~ 84 (360)
T PLN02586 10 PQKAFGWAARDPS--GVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF--TRYPIVPGHEIVGIVTKLGKN 84 (360)
T ss_pred hhheeEEEecCCC--CCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC--CCCCccCCcceeEEEEEECCC
Confidence 4445666655443 336777 78899999999999999999999999999887542 356899999999999999999
Q ss_pred CCCCCCCCEEEecc-----ccc--cc-------------------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhcc
Q 016265 161 VKEFKEGDEVYGDI-----NEK--AL-------------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGL 214 (392)
Q Consensus 161 v~~~~vGdrV~~~~-----~~~--~~-------------------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l 214 (392)
|++|++||||+... ..+ +. .|...+|+|+||++++++.++++|+++++++++.+
T Consensus 85 v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l 164 (360)
T PLN02586 85 VKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPL 164 (360)
T ss_pred CCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhh
Confidence 99999999997421 100 00 02223699999999999999999999999999999
Q ss_pred chhHHHHHHHHHh-cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc-HHHHHhcCCcEEEeCCCC-ccc
Q 016265 215 PLAIETAYEGLER-TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN-LEFLKSLGADLAIDYTKD-NFE 291 (392)
Q Consensus 215 ~~~~~ta~~al~~-~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~-~~~~~~~G~~~vi~~~~~-~~~ 291 (392)
++++.|+|+++.. ..+++|++|+|.| +|++|++++|+||. .|+++++++.++++ .+.++++|+++++++.+. .+.
T Consensus 165 ~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~-~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~ 242 (360)
T PLN02586 165 LCAGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKA-FGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMK 242 (360)
T ss_pred hcchHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHH
Confidence 9999999999865 4568999999987 79999999999999 59998888776665 456689999999987543 233
Q ss_pred cCCCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCceE---------EEE---eecHHHHHHHHHHHHCCCcc
Q 016265 292 DLPEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPGFR---------FVV---TSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 292 ~~~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~~~---------~~~---~~~~~~~~~~~~~l~~g~l~ 356 (392)
+...++|++||++|. ++.++++++++|+++.+|....+..++ .+. ......++++++++++|+++
T Consensus 243 ~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~ 322 (360)
T PLN02586 243 AAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNIT 322 (360)
T ss_pred hhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCC
Confidence 333479999999984 578999999999999998543221111 011 12346789999999999998
Q ss_pred cccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 357 PIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 357 ~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+.+ ++|+|+|+++||+.+.+++..||+|+.+
T Consensus 323 ~~~---~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 323 ADI---ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred CcE---EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 653 5799999999999999998889999875
No 14
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.9e-42 Score=336.87 Aligned_cols=299 Identities=23% Similarity=0.303 Sum_probs=243.9
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++...+.. ++++ +++.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++
T Consensus 2 ~~a~~~~~~~~~--l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~--~~~p~i~GhE~~G~V~~vG~~v~~ 76 (368)
T TIGR02818 2 SRAAVAWAAGQP--LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE--GVFPVILGHEGAGIVEAVGEGVTS 76 (368)
T ss_pred ceEEEEecCCCC--eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC--CCCCeeeccccEEEEEEECCCCcc
Confidence 899998877654 7777 89999999999999999999999999999887642 357899999999999999999999
Q ss_pred CCCCCEEEecccccc------cC---------------CC------------------CCCCcceeEEEecCCceeeCCC
Q 016265 164 FKEGDEVYGDINEKA------LE---------------GP------------------KQFGSLAEYTAVEERLLAPKPK 204 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~------~~---------------~~------------------~~~G~~a~~~~v~~~~~~~iP~ 204 (392)
|++||||++.....+ .. |. ...|+|+||++++...++++|+
T Consensus 77 ~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~ 156 (368)
T TIGR02818 77 VKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINP 156 (368)
T ss_pred CCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCC
Confidence 999999987532100 00 00 0137999999999999999999
Q ss_pred CCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEE
Q 016265 205 NLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLA 282 (392)
Q Consensus 205 ~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~v 282 (392)
++++++++.+++++.|||+++ +.+++++|++|||+| +|++|++++|+||.+ |+ ++++++.+++|++.++++|++++
T Consensus 157 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~-G~~~Vi~~~~~~~~~~~a~~~Ga~~~ 234 (368)
T TIGR02818 157 AAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATDC 234 (368)
T ss_pred CCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCeE
Confidence 999999999999999999998 568899999999997 799999999999994 98 68888899999999999999999
Q ss_pred EeCCC--Ccccc----C-CCCccEEEecCcc---HHHHHHhcccC-CeEEEEcCCCC--CCc---eEE-----EEe----
Q 016265 283 IDYTK--DNFED----L-PEKFDVVYDAIGQ---CDRAVKAIKEG-GTVVALTGAVT--PPG---FRF-----VVT---- 337 (392)
Q Consensus 283 i~~~~--~~~~~----~-~~~~D~vid~~G~---~~~~~~~l~~~-G~iv~~g~~~~--~~~---~~~-----~~~---- 337 (392)
+|+.+ .++.+ . ..++|++|||+|. +..++++++++ |+++.+|.... ... +.+ ...
T Consensus 235 i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~ 314 (368)
T TIGR02818 235 VNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFG 314 (368)
T ss_pred EcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeecc
Confidence 98764 22211 1 2379999999983 57899999886 99999986431 111 100 010
Q ss_pred --ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 338 --SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 338 --~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
.....+.++++++++|++++...++++|+|+|+++||+.+++++. .|++|++
T Consensus 315 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 315 GVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 124568899999999999876667899999999999999988765 6999864
No 15
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=4.6e-42 Score=327.58 Aligned_cols=290 Identities=20% Similarity=0.243 Sum_probs=227.7
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecC-hHhHHhhcCCCCCCC-CCCCCcCCCceeEEEEEeCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALN-PVDGKRRQGKFKATD-SPLPTVPGYDVAGVVVKVGTQ 160 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~~~-~~~p~v~G~e~~G~V~~vG~~ 160 (392)
+|||+++.+++. ++++ +.+.|+|++|||+||+.++||| ++|++.+.|.++... ..+|.++|||++|+|+++|++
T Consensus 1 ~~ka~~~~~~~~---l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 1 KTQAIVLSGPNQ---IELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred CceEEEEeCCCe---EEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 479999986654 8888 8999999999999999999995 799999988764322 357999999999999999999
Q ss_pred CCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEc
Q 016265 161 VKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLN 240 (392)
Q Consensus 161 v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~G 240 (392)
+ +|++||||+.....+.......+|+|+||+.++++.++++|++++++. +.+. .+.|||+++++.. .+|++|+|+|
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~-~~~~~vlV~G 152 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE-VKVLPDLIVG 152 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc-cCCCcEEEEC
Confidence 9 699999999743211110011369999999999999999999999865 4443 4679999997653 4689999997
Q ss_pred CCCcHHHHHHHHHHHhcCCeEEEE-eCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc---HHHHHHhccc
Q 016265 241 GSGGVGSLVIQLAKQVFGASRVAA-TSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ---CDRAVKAIKE 316 (392)
Q Consensus 241 a~G~vG~~aiqlak~~~G~~vv~~-~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~---~~~~~~~l~~ 316 (392)
+|++|++++|+||+ +|++++++ +.+++|++.++++ .++|+.+. ...++|++|||+|. ++.+++++++
T Consensus 153 -~G~vG~~a~q~ak~-~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l~~ 223 (308)
T TIGR01202 153 -HGTLGRLLARLTKA-AGGSPPAVWETNPRRRDGATGY---EVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRLAK 223 (308)
T ss_pred -CCHHHHHHHHHHHH-cCCceEEEeCCCHHHHHhhhhc---cccChhhc----cCCCCCEEEECCCCHHHHHHHHHhhhc
Confidence 89999999999998 59986654 4566676666543 45665332 24579999999994 5889999999
Q ss_pred CCeEEEEcCCCCCCceE----------EE--EeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCe
Q 016265 317 GGTVVALTGAVTPPGFR----------FV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATG 384 (392)
Q Consensus 317 ~G~iv~~g~~~~~~~~~----------~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~g 384 (392)
+|+++.+|....+..++ +. .....+.++++++++++|++++...+++.|||+|+++||+.+.++...+
T Consensus 224 ~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~ 303 (308)
T TIGR01202 224 GGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCL 303 (308)
T ss_pred CcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCce
Confidence 99999998654222211 11 1123567899999999999998767889999999999999988777778
Q ss_pred eEEEE
Q 016265 385 KVVIH 389 (392)
Q Consensus 385 Kvvl~ 389 (392)
|++|+
T Consensus 304 Kv~~~ 308 (308)
T TIGR01202 304 KMILD 308 (308)
T ss_pred EEEeC
Confidence 99874
No 16
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.8e-42 Score=334.10 Aligned_cols=299 Identities=22% Similarity=0.297 Sum_probs=238.6
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
.||+.+...+..+.+++. +++.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++
T Consensus 5 ~~a~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~--~~~p~i~GhE~aG~Vv~vG~~v~~ 81 (375)
T PLN02178 5 NKAFGWAANDESGVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF--SRYPIIPGHEIVGIATKVGKNVTK 81 (375)
T ss_pred ceeEEEEEccCCCCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC--CCCCcccCceeeEEEEEECCCCCc
Confidence 455555555544447777 78889999999999999999999999999887532 346889999999999999999999
Q ss_pred CCCCCEEEec-----cccc--cc-------------------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchh
Q 016265 164 FKEGDEVYGD-----INEK--AL-------------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLA 217 (392)
Q Consensus 164 ~~vGdrV~~~-----~~~~--~~-------------------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~ 217 (392)
|++||||+.. +..+ +. .|...+|+|+||++++++.++++|+++++++++.++++
T Consensus 82 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~ 161 (375)
T PLN02178 82 FKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCA 161 (375)
T ss_pred cCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhcc
Confidence 9999999742 1110 00 02223699999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc-cHHHHHhcCCcEEEeCCCC-ccccC
Q 016265 218 IETAYEGLERTG--FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR-NLEFLKSLGADLAIDYTKD-NFEDL 293 (392)
Q Consensus 218 ~~ta~~al~~~~--~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~-~~~~~~~~G~~~vi~~~~~-~~~~~ 293 (392)
..|+|+++.... .++|++|+|.| +|++|++++|+||. .|+++++++.+++ +++.++++|+++++++.+. .+.+.
T Consensus 162 ~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~-~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~ 239 (375)
T PLN02178 162 GITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKA-FGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA 239 (375)
T ss_pred chHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHH-cCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHh
Confidence 999999996554 36899999998 79999999999999 4999888877654 4788899999999987542 22223
Q ss_pred CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCce----------EE--EEeecHHHHHHHHHHHHCCCcccc
Q 016265 294 PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPGF----------RF--VVTSNGEVLKKLNPYLESGKVKPI 358 (392)
Q Consensus 294 ~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~l~~g~l~~~ 358 (392)
..++|++|||+|. ++.++++++++|+++.+|....+..+ .+ ......+.+.++++++++|++++.
T Consensus 240 ~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~ 319 (375)
T PLN02178 240 VGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSD 319 (375)
T ss_pred hCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCccc
Confidence 3479999999983 58899999999999999865322111 11 111234678999999999999875
Q ss_pred cCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 359 IDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 359 ~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+ +.|||+|+++||+.+++++..||+|+.+
T Consensus 320 i---~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 320 I---ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred E---EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 3 5799999999999999998889999875
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.4e-41 Score=333.91 Aligned_cols=298 Identities=21% Similarity=0.291 Sum_probs=232.2
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCC-------CCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEE
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVK-------EDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVV 155 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~ 155 (392)
.|||+++.++++ ++++ +++.|+|+ +|||||||.++|||++|++.+.|.++ ..+|.++|||++|+|+
T Consensus 2 ~mka~v~~~~~~---~~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~---~~~p~i~GhE~~G~V~ 74 (393)
T TIGR02819 2 GNRGVVYLGPGK---VEVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT---APTGLVLGHEITGEVI 74 (393)
T ss_pred CceEEEEecCCc---eeEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC---CCCCccccceeEEEEE
Confidence 589999988775 7777 89998874 68999999999999999999988653 3468999999999999
Q ss_pred EeCCCCCCCCCCCEEEecccccc------------------------cCCC----CCCCcceeEEEecCC--ceeeCCCC
Q 016265 156 KVGTQVKEFKEGDEVYGDINEKA------------------------LEGP----KQFGSLAEYTAVEER--LLAPKPKN 205 (392)
Q Consensus 156 ~vG~~v~~~~vGdrV~~~~~~~~------------------------~~~~----~~~G~~a~~~~v~~~--~~~~iP~~ 205 (392)
++|++|++|++||||+......+ ..|. ..+|+|+||++++.. .++++|++
T Consensus 75 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~ 154 (393)
T TIGR02819 75 EKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDR 154 (393)
T ss_pred EEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCc
Confidence 99999999999999976421000 0011 136999999999964 79999998
Q ss_pred CCH----HhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEE-eCCcccHHHHHhcCCc
Q 016265 206 LDF----VQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAA-TSSTRNLEFLKSLGAD 280 (392)
Q Consensus 206 l~~----~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~-~~~~~~~~~~~~~G~~ 280 (392)
++. .+++.+.+++.++|+++.+.++++|++|+|.| +|++|++++|+|+. .|++++++ +.+++|+++++++|++
T Consensus 155 ~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~-~Ga~~vi~~d~~~~r~~~a~~~Ga~ 232 (393)
T TIGR02819 155 DQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQL-LGAAVVIVGDLNPARLAQARSFGCE 232 (393)
T ss_pred ccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCceEEEeCCCHHHHHHHHHcCCe
Confidence 753 34566778888999999888899999999975 89999999999998 59986655 4678899999999997
Q ss_pred EEEeCC-CCccc----cC--CCCccEEEecCcc-----------------HHHHHHhcccCCeEEEEcCCCC-CC-c---
Q 016265 281 LAIDYT-KDNFE----DL--PEKFDVVYDAIGQ-----------------CDRAVKAIKEGGTVVALTGAVT-PP-G--- 331 (392)
Q Consensus 281 ~vi~~~-~~~~~----~~--~~~~D~vid~~G~-----------------~~~~~~~l~~~G~iv~~g~~~~-~~-~--- 331 (392)
. +++. +.++. +. ..++|++|||+|. ++.++++++++|+++.+|.+.. +. .
T Consensus 233 ~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~ 311 (393)
T TIGR02819 233 T-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDA 311 (393)
T ss_pred E-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccc
Confidence 5 5543 33322 12 3479999999983 6789999999999999987531 11 0
Q ss_pred ------eEEEE--------------eecHHHHHHHHHHHHCCCcccccCCC-cccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 332 ------FRFVV--------------TSNGEVLKKLNPYLESGKVKPIIDPK-GPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 332 ------~~~~~--------------~~~~~~~~~~~~~l~~g~l~~~~~~t-~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+.+.. .....++.++++++.+|++++...++ ++|+|+|+++||+.+.+++. +|++|++
T Consensus 312 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~ 390 (393)
T TIGR02819 312 AAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDP 390 (393)
T ss_pred cccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeC
Confidence 00000 00013346789999999998765555 78999999999999998754 8999986
Q ss_pred C
Q 016265 391 I 391 (392)
Q Consensus 391 ~ 391 (392)
.
T Consensus 391 ~ 391 (393)
T TIGR02819 391 H 391 (393)
T ss_pred C
Confidence 3
No 18
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.6e-41 Score=331.82 Aligned_cols=299 Identities=24% Similarity=0.306 Sum_probs=244.0
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
+|||+++...+.. ++++ +.+.|.|+++||+||+.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 2 ~~~a~~~~~~~~~--~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~vG~~v~ 76 (368)
T cd08300 2 TCKAAVAWEAGKP--LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE--GLFPVILGHEGAGIVESVGEGVT 76 (368)
T ss_pred cceEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc--CCCCceeccceeEEEEEeCCCCc
Confidence 5899998776654 7777 89999999999999999999999999999887642 35789999999999999999999
Q ss_pred CCCCCCEEEecccccc------cC---------------C------------------CCCCCcceeEEEecCCceeeCC
Q 016265 163 EFKEGDEVYGDINEKA------LE---------------G------------------PKQFGSLAEYTAVEERLLAPKP 203 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~------~~---------------~------------------~~~~G~~a~~~~v~~~~~~~iP 203 (392)
+|++||||++.....+ .. | ....|+|+||+.+++..++++|
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 156 (368)
T cd08300 77 SVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKIN 156 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCC
Confidence 9999999987521100 00 0 0013689999999999999999
Q ss_pred CCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcE
Q 016265 204 KNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADL 281 (392)
Q Consensus 204 ~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~ 281 (392)
+++++++++.+++++.|||+++ +.+.+++|++|||+| +|++|++++|+||.+ |+ ++++++.+++|++.++++|+++
T Consensus 157 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~-G~~~vi~~~~~~~~~~~~~~lGa~~ 234 (368)
T cd08300 157 PEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATD 234 (368)
T ss_pred CCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCE
Confidence 9999999999999999999987 568899999999997 799999999999994 99 6888889999999999999999
Q ss_pred EEeCCCC--cccc----C-CCCccEEEecCcc---HHHHHHhcccC-CeEEEEcCCCC--CCc-----e----E---EEE
Q 016265 282 AIDYTKD--NFED----L-PEKFDVVYDAIGQ---CDRAVKAIKEG-GTVVALTGAVT--PPG-----F----R---FVV 336 (392)
Q Consensus 282 vi~~~~~--~~~~----~-~~~~D~vid~~G~---~~~~~~~l~~~-G~iv~~g~~~~--~~~-----~----~---~~~ 336 (392)
++|+.+. ++.+ . .+++|+||||+|. ++.++++++++ |+++.+|.... ... + . +..
T Consensus 235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (368)
T cd08300 235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAF 314 (368)
T ss_pred EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEe
Confidence 9998653 2322 1 2379999999983 57899999987 99999986521 110 0 0 001
Q ss_pred --eecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 337 --TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 337 --~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
....+.+.++++++++|++++...++++|+|+|+++||+.+++++. .|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 1134678899999999999876667899999999999999988875 598874
No 19
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.3e-42 Score=308.63 Aligned_cols=303 Identities=23% Similarity=0.299 Sum_probs=253.1
Q ss_pred CCCcceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeC
Q 016265 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (392)
Q Consensus 79 ~~p~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG 158 (392)
..+.++||.|..+++++ |.++ |+.+++|+..||+||+.++++|++|.+.+.|..+ ...+|.++|||++|+|+.+|
T Consensus 3 gkvI~CKAAV~w~a~~P--L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~--~~~fP~IlGHEaaGIVESvG 77 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKP--LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP--EGLFPVILGHEAAGIVESVG 77 (375)
T ss_pred CCceEEeEeeeccCCCC--eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCCc--cccCceEecccceeEEEEec
Confidence 35678999999999988 7777 8999999999999999999999999999999863 45689999999999999999
Q ss_pred CCCCCCCCCCEEEecccccc---------------------------cCCC-------------CCCCcceeEEEecCCc
Q 016265 159 TQVKEFKEGDEVYGDINEKA---------------------------LEGP-------------KQFGSLAEYTAVEERL 198 (392)
Q Consensus 159 ~~v~~~~vGdrV~~~~~~~~---------------------------~~~~-------------~~~G~~a~~~~v~~~~ 198 (392)
++|+++++||+|+..+...+ .+|. -...+|+||.+++...
T Consensus 78 egV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~ 157 (375)
T KOG0022|consen 78 EGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDIS 157 (375)
T ss_pred CCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecce
Confidence 99999999999985432100 0110 0124899999999999
Q ss_pred eeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHh
Q 016265 199 LAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKS 276 (392)
Q Consensus 199 ~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~ 276 (392)
++++++..+++.++.+.|.+.|+|.|. +.+++++|++|.|+| .|++|++++|-||.. || ++|.++.+++|.+.+++
T Consensus 158 v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~-GAsrIIgvDiN~~Kf~~ak~ 235 (375)
T KOG0022|consen 158 VAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAA-GASRIIGVDINPDKFEKAKE 235 (375)
T ss_pred eEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhc-CcccEEEEecCHHHHHHHHh
Confidence 999999999999999999999999976 679999999999998 999999999999995 77 56667789999999999
Q ss_pred cCCcEEEeCCCC--cccc----C-CCCccEEEecCcc---HHHHHHhcccC-CeEEEEcCCCCCCceE-----EEE----
Q 016265 277 LGADLAIDYTKD--NFED----L-PEKFDVVYDAIGQ---CDRAVKAIKEG-GTVVALTGAVTPPGFR-----FVV---- 336 (392)
Q Consensus 277 ~G~~~vi~~~~~--~~~~----~-~~~~D~vid~~G~---~~~~~~~l~~~-G~iv~~g~~~~~~~~~-----~~~---- 336 (392)
+|+++++|+.+. ...+ + ..|+|+.|||+|. +.+++.+...| |+-|.+|.......+. ++.
T Consensus 236 fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~ 315 (375)
T KOG0022|consen 236 FGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTW 315 (375)
T ss_pred cCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEE
Confidence 999999998731 1222 1 4689999999995 57888888888 9999998765332221 110
Q ss_pred -------eecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 337 -------TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 337 -------~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
.....++..+++...+++++...++||++||+++++||+.|.+|+.. +.|+.
T Consensus 316 ~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 316 KGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred EEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 11346788999999999999998999999999999999999999886 77765
No 20
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=3.8e-41 Score=329.99 Aligned_cols=298 Identities=21% Similarity=0.262 Sum_probs=241.7
Q ss_pred cceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCC
Q 016265 82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (392)
Q Consensus 82 ~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v 161 (392)
..|||+++.++++. ++++ +.+.|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++|++|
T Consensus 11 ~~mka~~~~~~~~~--~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~v 82 (378)
T PLN02827 11 ITCRAAVAWGAGEA--LVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEGV 82 (378)
T ss_pred ceeEEEEEecCCCC--ceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCCC
Confidence 35999999876543 7777 899999999999999999999999999887642 357899999999999999999
Q ss_pred CCCCCCCEEEecccccc------cC----------------------------CC-----CCCCcceeEEEecCCceeeC
Q 016265 162 KEFKEGDEVYGDINEKA------LE----------------------------GP-----KQFGSLAEYTAVEERLLAPK 202 (392)
Q Consensus 162 ~~~~vGdrV~~~~~~~~------~~----------------------------~~-----~~~G~~a~~~~v~~~~~~~i 202 (392)
++|++||||++.....+ .. |. ...|+|+||+.+++..++++
T Consensus 83 ~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~i 162 (378)
T PLN02827 83 TEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
T ss_pred cccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEEC
Confidence 99999999987532100 00 00 02489999999999999999
Q ss_pred CCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCc
Q 016265 203 PKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGAD 280 (392)
Q Consensus 203 P~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~ 280 (392)
|+++++++++.+++++.++|+++ +.+++++|++|||+| +|++|++++|+||.+ |++ +++++.+++|+++++++|++
T Consensus 163 P~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~-G~~~vi~~~~~~~~~~~a~~lGa~ 240 (378)
T PLN02827 163 DPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLR-GASQIIGVDINPEKAEKAKTFGVT 240 (378)
T ss_pred CCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCc
Confidence 99999999998888888999877 457899999999998 799999999999985 986 55566799999999999999
Q ss_pred EEEeCCCC--cccc----C-CCCccEEEecCcc---HHHHHHhcccC-CeEEEEcCCCCCCce-----------EEE--E
Q 016265 281 LAIDYTKD--NFED----L-PEKFDVVYDAIGQ---CDRAVKAIKEG-GTVVALTGAVTPPGF-----------RFV--V 336 (392)
Q Consensus 281 ~vi~~~~~--~~~~----~-~~~~D~vid~~G~---~~~~~~~l~~~-G~iv~~g~~~~~~~~-----------~~~--~ 336 (392)
+++++.+. ++.+ . .+++|++||++|. +..++++++++ |+++.+|.......+ .+. .
T Consensus 241 ~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 320 (378)
T PLN02827 241 DFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSL 320 (378)
T ss_pred EEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeee
Confidence 99988652 3322 1 3379999999993 58899999998 999999875421111 110 0
Q ss_pred e---ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 337 T---SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 337 ~---~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
. .....++++++++++|++++...++++|+|+|+++||+.+++++. +|+||.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 321 FGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred cCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence 0 123467889999999999986567899999999999999998876 6999986
No 21
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=6.8e-41 Score=321.72 Aligned_cols=291 Identities=26% Similarity=0.379 Sum_probs=240.3
Q ss_pred eeEEEEcccCCc---ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCC
Q 016265 84 MKAWLYGEYGGV---DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQ 160 (392)
Q Consensus 84 mka~v~~~~~~~---~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~ 160 (392)
|||+++.+++.+ +.+++. +.+.|.|+++||+||+.++|+|++|++.+.|.++. ...+|.++|||++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~ 78 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS-TKALPVPPGFEGSGTVVAAGGG 78 (324)
T ss_pred CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCcCCCcceEEEEEEECCC
Confidence 799999988865 468888 89999999999999999999999999999887642 2346889999999999999999
Q ss_pred CCC-CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEE
Q 016265 161 VKE-FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVL 239 (392)
Q Consensus 161 v~~-~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~ 239 (392)
+++ |++||+|++... .+|+|+||+.++++.++++|+++++++++.+++...|||..++.... ++++++|+
T Consensus 79 v~~~~~vGd~V~~~~~--------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~ 149 (324)
T cd08291 79 PLAQSLIGKRVAFLAG--------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVH 149 (324)
T ss_pred ccccCCCCCEEEecCC--------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEE
Confidence 996 999999998542 14999999999999999999999999999888888899866655555 56667666
Q ss_pred -cCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCcc--HHHH
Q 016265 240 -NGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIGQ--CDRA 310 (392)
Q Consensus 240 -Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G~--~~~~ 310 (392)
||+|++|++++|+||. .|+++++++++++|+++++++|+++++++...++.+ . .+++|++||++|. ....
T Consensus 150 ~~g~g~vG~~a~q~a~~-~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~ 228 (324)
T cd08291 150 TAAASALGRMLVRLCKA-DGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQI 228 (324)
T ss_pred ccCccHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHH
Confidence 7899999999999999 599999999999999999999999999987765532 1 3479999999984 5678
Q ss_pred HHhcccCCeEEEEcCCCCC----C--------ceEEEE--------eecHHHHHHHHHHHHCCCcccccCCCcccchhhH
Q 016265 311 VKAIKEGGTVVALTGAVTP----P--------GFRFVV--------TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQV 370 (392)
Q Consensus 311 ~~~l~~~G~iv~~g~~~~~----~--------~~~~~~--------~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~ 370 (392)
+++++++|+++.+|..... . .+.+.. ......+++++++++ |.+++. ++++|+|+|+
T Consensus 229 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--i~~~~~l~~~ 305 (324)
T cd08291 229 LLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTT--FASRYPLALT 305 (324)
T ss_pred HHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccc--eeeEEcHHHH
Confidence 9999999999999753211 1 111111 012456788888988 888765 4588999999
Q ss_pred HHHHHHHHhCCCCeeEEEE
Q 016265 371 VEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 371 ~~A~~~l~~~~~~gKvvl~ 389 (392)
.+||+.+++++..||+++.
T Consensus 306 ~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 306 LEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHhCCCCCeEEeC
Confidence 9999999999989999873
No 22
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.1e-41 Score=329.87 Aligned_cols=299 Identities=20% Similarity=0.237 Sum_probs=243.9
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
+|||+++.+.+.. ++++ +++.|+|+++||+||+.++|||++|++.+.|..+ ...+|.++|||++|+|+++|++|+
T Consensus 2 ~~ka~~~~~~~~~--~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~ 76 (369)
T cd08301 2 TCKAAVAWEAGKP--LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ--TPLFPRILGHEAAGIVESVGEGVT 76 (369)
T ss_pred ccEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC--CCCCCcccccccceEEEEeCCCCC
Confidence 6899999877654 7788 8999999999999999999999999999988754 245789999999999999999999
Q ss_pred CCCCCCEEEecccccc------cC-----------------------------C-----CCCCCcceeEEEecCCceeeC
Q 016265 163 EFKEGDEVYGDINEKA------LE-----------------------------G-----PKQFGSLAEYTAVEERLLAPK 202 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~------~~-----------------------------~-----~~~~G~~a~~~~v~~~~~~~i 202 (392)
+|++||||++.....+ .. | ....|+|+||+.++...++++
T Consensus 77 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i 156 (369)
T cd08301 77 DLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKI 156 (369)
T ss_pred ccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEEC
Confidence 9999999987532100 00 0 002488999999999999999
Q ss_pred CCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCc
Q 016265 203 PKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGAD 280 (392)
Q Consensus 203 P~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~ 280 (392)
|+++++++++.+++++.|+|+++ +..++++|++|||+| +|++|++++|+||. .|+ ++++++++++|+++++++|++
T Consensus 157 P~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~-~G~~~vi~~~~~~~~~~~~~~~Ga~ 234 (369)
T cd08301 157 NPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARI-RGASRIIGVDLNPSKFEQAKKFGVT 234 (369)
T ss_pred CCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999987 458899999999997 79999999999998 498 688888999999999999999
Q ss_pred EEEeCCCC--ccc----c-CCCCccEEEecCcc---HHHHHHhcccC-CeEEEEcCCCCCC--ce---------EEEE--
Q 016265 281 LAIDYTKD--NFE----D-LPEKFDVVYDAIGQ---CDRAVKAIKEG-GTVVALTGAVTPP--GF---------RFVV-- 336 (392)
Q Consensus 281 ~vi~~~~~--~~~----~-~~~~~D~vid~~G~---~~~~~~~l~~~-G~iv~~g~~~~~~--~~---------~~~~-- 336 (392)
.++++.+. .+. + ..+++|++|||+|. +..++++++++ |+++.+|....+. .+ .+..
T Consensus 235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 314 (369)
T cd08301 235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTL 314 (369)
T ss_pred eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEe
Confidence 99987652 222 1 13479999999983 57889999996 9999998654211 11 1111
Q ss_pred --e-ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 337 --T-SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 337 --~-~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
. .....++++++++.+|+++....+++.|+|+|+++||+.+++++. .|++|+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~~ 369 (369)
T cd08301 315 FGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCILH 369 (369)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEeC
Confidence 0 123468899999999998876567899999999999999999886 488874
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-40 Score=323.03 Aligned_cols=297 Identities=21% Similarity=0.274 Sum_probs=238.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCC-CCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||+++++++. ++++ +.+.|.| +++||+|||.++|+|++|++.+.+.. ...+|.++|||++|+|+++|++|+
T Consensus 1 Mka~~~~~~~~---~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v~ 73 (347)
T PRK10309 1 MKSVVNDTDGI---VRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG---AHYYPITLGHEFSGYVEAVGSGVD 73 (347)
T ss_pred CceEEEeCCCc---eEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC---CCCCCcccccceEEEEEEeCCCCC
Confidence 79999987764 7888 8999987 59999999999999999987543211 123578999999999999999999
Q ss_pred CCCCCCEEEecccccc------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 163 EFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
+|++||||++.....+ ..+...+|+|+||+.++++.++++|+++++++++.+. .+.++|++
T Consensus 74 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~ 152 (347)
T PRK10309 74 DLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA 152 (347)
T ss_pred CCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH
Confidence 9999999987532110 0122246999999999999999999999999998763 34458888
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc---C--CCCcc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED---L--PEKFD 298 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~---~--~~~~D 298 (392)
++...+++|++|+|+| +|++|++++|+|+.+ |++ +++++++++|+++++++|+++++++++.+..+ . ..++|
T Consensus 153 ~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d 230 (347)
T PRK10309 153 FHLAQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFD 230 (347)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCC
Confidence 8778889999999997 799999999999995 997 56677899999999999999999876544221 1 24688
Q ss_pred -EEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCc-------------eEEE--Eee-----cHHHHHHHHHHHHCCC
Q 016265 299 -VVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPG-------------FRFV--VTS-----NGEVLKKLNPYLESGK 354 (392)
Q Consensus 299 -~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~-------------~~~~--~~~-----~~~~~~~~~~~l~~g~ 354 (392)
++|||+|. +..++++++++|+++.+|....... +.+. ... ..+.++++++++++|+
T Consensus 231 ~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~ 310 (347)
T PRK10309 231 QLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERK 310 (347)
T ss_pred eEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCC
Confidence 99999993 5889999999999999986532110 1111 000 1367889999999999
Q ss_pred cccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 355 VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 355 l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
++....+++.|+|+|+++||+.+.+++..||+|+++
T Consensus 311 i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 311 LSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred CCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 986666789999999999999999998889999976
No 24
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.3e-40 Score=321.12 Aligned_cols=300 Identities=23% Similarity=0.320 Sum_probs=242.1
Q ss_pred cceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCC
Q 016265 82 SEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (392)
Q Consensus 82 ~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v 161 (392)
..++|+++.+++.. ++++ +++.|+|+++||+||+.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 8 ~~~~~~~~~~~~~~--~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~--~~~p~i~G~E~~G~Vv~vG~~v 82 (357)
T PLN02514 8 KKTTGWAARDPSGH--LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM--SNYPMVPGHEVVGEVVEVGSDV 82 (357)
T ss_pred ceEEEEEEecCCCC--ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc--CCCCccCCceeeEEEEEECCCc
Confidence 34799999988865 7777 89999999999999999999999999999887532 3468899999999999999999
Q ss_pred CCCCCCCEEEecc-----ccc--c-------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccc
Q 016265 162 KEFKEGDEVYGDI-----NEK--A-------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLP 215 (392)
Q Consensus 162 ~~~~vGdrV~~~~-----~~~--~-------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~ 215 (392)
++|++||+|+... ..+ + ..|...+|+|+||+.++...++++|+++++++++.++
T Consensus 83 ~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~ 162 (357)
T PLN02514 83 SKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLL 162 (357)
T ss_pred ccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhh
Confidence 9999999997421 100 0 0011236999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhcC-CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcEEEeCCCC-cccc
Q 016265 216 LAIETAYEGLERTG-FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADLAIDYTKD-NFED 292 (392)
Q Consensus 216 ~~~~ta~~al~~~~-~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~vi~~~~~-~~~~ 292 (392)
+++.|||+++.... .++|++|+|+| +|++|++++|+||. .|+++++++.++++++.+ +++|+++++++.+. .+.+
T Consensus 163 ~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~-~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 163 CAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKA-MGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 99999999996544 57999999996 89999999999999 499988888877776554 67999988876443 2233
Q ss_pred CCCCccEEEecCc---cHHHHHHhcccCCeEEEEcCCCCCCce----------EE--EEeecHHHHHHHHHHHHCCCccc
Q 016265 293 LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----------RF--VVTSNGEVLKKLNPYLESGKVKP 357 (392)
Q Consensus 293 ~~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~l~~g~l~~ 357 (392)
...++|++|||+| .++.++++++++|+++.+|....+..+ .+ ........+.++++++++|++++
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~ 320 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTS 320 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcC
Confidence 3457999999998 368899999999999999865422111 11 11123457899999999999875
Q ss_pred ccCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 016265 358 IIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 358 ~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
. + ++|+|+|+.+||+.+++++..||+|+.+.
T Consensus 321 ~--i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 321 M--I-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred c--E-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 4 2 57999999999999999998899999864
No 25
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.4e-40 Score=321.71 Aligned_cols=293 Identities=19% Similarity=0.194 Sum_probs=222.3
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCC--CCCCCCcCCCceeEEEEEeCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT--DSPLPTVPGYDVAGVVVKVGTQV 161 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~--~~~~p~v~G~e~~G~V~~vG~~v 161 (392)
.|+++++.+++ ++++ +.+.|+ ++|||+|||.++|||++|++.++|.+... ...+|.++|||++|+|+++|.+
T Consensus 3 ~~~~~~~~~~~---~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~- 76 (341)
T cd08237 3 NQVYRLVRPKF---FEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG- 76 (341)
T ss_pred ccceEEeccce---EEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence 36788877765 7888 889995 99999999999999999999999875321 1357999999999999998864
Q ss_pred CCCCCCCEEEecccccc---------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH
Q 016265 162 KEFKEGDEVYGDINEKA---------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE 226 (392)
Q Consensus 162 ~~~~vGdrV~~~~~~~~---------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~ 226 (392)
+|++||||+......+ ..+...+|+|+||+++++++++++|+++++++|+. ..++.++|+++.
T Consensus 77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~-~~~~~~a~~a~~ 154 (341)
T cd08237 77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAF-TELVSVGVHAIS 154 (341)
T ss_pred -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhh-hchHHHHHHHHH
Confidence 7999999987532110 01223469999999999999999999999988774 457778999985
Q ss_pred h---cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEe
Q 016265 227 R---TGFSAGKSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYD 302 (392)
Q Consensus 227 ~---~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid 302 (392)
. +.+++|++|+|+| +|++|++++|+|+.+.| +++++++.+++|+++++++++++.++. +.+ ..++|+|||
T Consensus 155 ~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~----~~~-~~g~d~viD 228 (341)
T cd08237 155 RFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD----IPE-DLAVDHAFE 228 (341)
T ss_pred HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh----hhh-ccCCcEEEE
Confidence 3 4578999999998 79999999999986334 578888889999999988776654421 111 126999999
Q ss_pred cCcc------HHHHHHhcccCCeEEEEcCCCCCCc----------eEE--EEeecHHHHHHHHHHHHCC---CcccccCC
Q 016265 303 AIGQ------CDRAVKAIKEGGTVVALTGAVTPPG----------FRF--VVTSNGEVLKKLNPYLESG---KVKPIIDP 361 (392)
Q Consensus 303 ~~G~------~~~~~~~l~~~G~iv~~g~~~~~~~----------~~~--~~~~~~~~~~~~~~~l~~g---~l~~~~~~ 361 (392)
++|. ++.++++++++|+++.+|....+.. +.+ ........++++++++.+| +.+....+
T Consensus 229 ~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 308 (341)
T cd08237 229 CVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLV 308 (341)
T ss_pred CCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHh
Confidence 9982 6889999999999999986432211 111 1112346789999999999 22344456
Q ss_pred Ccccchh---hHHHHHHHHHhCCCCeeEEEEeC
Q 016265 362 KGPFPFS---QVVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 362 t~~~~l~---~~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
+++|+++ |+.+||+.+.++ ..||+||++.
T Consensus 309 ~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 309 GGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred ccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 7889974 666666666554 5699999874
No 26
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=4.4e-40 Score=319.39 Aligned_cols=296 Identities=21% Similarity=0.357 Sum_probs=238.3
Q ss_pred EEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCC
Q 016265 87 WLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKE 166 (392)
Q Consensus 87 ~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~v 166 (392)
+++++++.. ++++ +.|.|.++++||+||+.++|+|++|++.+.+... ....+|.++|||++|+|+++|++++.+ +
T Consensus 2 ~~~~~~g~~--~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~-~ 76 (349)
T TIGR03201 2 WMMTEPGKP--MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR-TNHALPLALGHEISGRVIQAGAGAASW-I 76 (349)
T ss_pred ceEecCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCCC-ccCCCCeeccccceEEEEEeCCCcCCC-C
Confidence 455666653 6777 8999999999999999999999999998744322 123468899999999999999999887 9
Q ss_pred CCEEEecccccc------------------cCCCCCCCcceeEEEecCCceeeCCC------CCCHHhHhccchhHHHHH
Q 016265 167 GDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPK------NLDFVQAAGLPLAIETAY 222 (392)
Q Consensus 167 GdrV~~~~~~~~------------------~~~~~~~G~~a~~~~v~~~~~~~iP~------~l~~~~aa~l~~~~~ta~ 222 (392)
||||+......+ ..|...+|+|+||+.++.+.++++|+ ++++++++.+++++.|+|
T Consensus 77 GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~ 156 (349)
T TIGR03201 77 GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPY 156 (349)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHH
Confidence 999986321100 11222469999999999999999999 899999999999999999
Q ss_pred HHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCc---ccc----C--
Q 016265 223 EGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDN---FED----L-- 293 (392)
Q Consensus 223 ~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~---~~~----~-- 293 (392)
+++.+..+++|++|+|+|+ |++|++++|+|+. .|+++++++++++|+++++++|+++++++.+.+ +.+ .
T Consensus 157 ~a~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~-~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~ 234 (349)
T TIGR03201 157 QAAVQAGLKKGDLVIVIGA-GGVGGYMVQTAKA-MGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAK 234 (349)
T ss_pred HHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHH-cCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcc
Confidence 9998888999999999996 9999999999999 499988888999999999999999999876542 211 1
Q ss_pred CCCcc----EEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCce----------EEE--EeecHHHHHHHHHHHHCCC
Q 016265 294 PEKFD----VVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPGF----------RFV--VTSNGEVLKKLNPYLESGK 354 (392)
Q Consensus 294 ~~~~D----~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~~----------~~~--~~~~~~~~~~~~~~l~~g~ 354 (392)
..++| ++|||+|. ++.++++++++|+++.+|.......+ ... .......++++++++++|+
T Consensus 235 ~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~ 314 (349)
T TIGR03201 235 ARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGK 314 (349)
T ss_pred cCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCC
Confidence 23665 89999994 46789999999999999875422111 111 1123567899999999999
Q ss_pred cccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 355 VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 355 l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+++...+ +.|+|+|+++||+.+.+++..||+++++
T Consensus 315 i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 315 IQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred CCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 9875444 4799999999999999999889999864
No 27
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=6e-40 Score=324.95 Aligned_cols=302 Identities=22% Similarity=0.304 Sum_probs=234.5
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhh-cCCCCC----CCCCCCCcCCCceeEEEEEe
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRR-QGKFKA----TDSPLPTVPGYDVAGVVVKV 157 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~----~~~~~p~v~G~e~~G~V~~v 157 (392)
+||++++.+++. ++++ ++|.|+|+++||+|||.++|||++|++.+ .|.... ....+|.++|||++|+|+++
T Consensus 2 ~~~a~~~~~~~~---l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v 77 (410)
T cd08238 2 KTKAWRMYGKGD---LRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV 77 (410)
T ss_pred CcEEEEEEcCCc---eEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence 589999987764 7888 89999999999999999999999999976 454211 11246889999999999999
Q ss_pred CCCCC-CCCCCCEEEeccccccc-------CCCCCCCcceeEEEecCC----ceeeCCCCCCHHhHhcc-chhH-HHHHH
Q 016265 158 GTQVK-EFKEGDEVYGDINEKAL-------EGPKQFGSLAEYTAVEER----LLAPKPKNLDFVQAAGL-PLAI-ETAYE 223 (392)
Q Consensus 158 G~~v~-~~~vGdrV~~~~~~~~~-------~~~~~~G~~a~~~~v~~~----~~~~iP~~l~~~~aa~l-~~~~-~ta~~ 223 (392)
|++|+ +|++||||++.....+. .+...+|+|+||++++.+ .++++|+++++++++.+ ++++ .++++
T Consensus 78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~ 157 (410)
T cd08238 78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT 157 (410)
T ss_pred CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence 99998 69999999875321110 122346999999999987 68999999999998865 4332 23443
Q ss_pred HH---------HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC---eEEEEeCCcccHHHHHhc--------CCc-EE
Q 016265 224 GL---------ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA---SRVAATSSTRNLEFLKSL--------GAD-LA 282 (392)
Q Consensus 224 al---------~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~---~vv~~~~~~~~~~~~~~~--------G~~-~v 282 (392)
++ +++++++|++|+|+|++|++|++++|+||.+ |+ ++++++.+++|++.++++ |++ .+
T Consensus 158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~-G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~ 236 (410)
T cd08238 158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHG-PIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY 236 (410)
T ss_pred hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc-ccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE
Confidence 32 3567899999999998999999999999985 54 688889999999999997 776 56
Q ss_pred EeCCC-Ccccc----C--CCCccEEEecCc---cHHHHHHhcccCCeEEEEcCCC-C--CCceE----------EE--Ee
Q 016265 283 IDYTK-DNFED----L--PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV-T--PPGFR----------FV--VT 337 (392)
Q Consensus 283 i~~~~-~~~~~----~--~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~-~--~~~~~----------~~--~~ 337 (392)
+++.+ .++.+ . ..++|++||++| .+..++++++++|+++.+++.. . ...++ +. ..
T Consensus 237 i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 316 (410)
T cd08238 237 VNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSG 316 (410)
T ss_pred ECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCC
Confidence 77654 33322 1 347999999997 3688999999999988775421 1 11111 11 11
Q ss_pred ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 338 SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 338 ~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
.....++++++++++|++++...++++|+|+|+++||+.+. ++..||+|+.+
T Consensus 317 ~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 317 GNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred CCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence 24567899999999999998777889999999999999999 67779999986
No 28
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.1e-39 Score=318.35 Aligned_cols=298 Identities=22% Similarity=0.261 Sum_probs=242.0
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
.|||+++.+.++. ++++ ++|.|.++++||+||+.++|+|++|++.+.|.++ ..+|.++|||++|+|+++|++|+
T Consensus 2 ~~ka~~~~~~~~~--~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~ 75 (365)
T cd08277 2 KCKAAVAWEAGKP--LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA---TLFPVILGHEGAGIVESVGEGVT 75 (365)
T ss_pred ccEEEEEccCCCC--cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC---CCCCeecccceeEEEEeeCCCCc
Confidence 4899999876654 6777 8999999999999999999999999999988754 35688999999999999999999
Q ss_pred CCCCCCEEEeccccc------ccCC--------------------------------CCCCCcceeEEEecCCceeeCCC
Q 016265 163 EFKEGDEVYGDINEK------ALEG--------------------------------PKQFGSLAEYTAVEERLLAPKPK 204 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~------~~~~--------------------------------~~~~G~~a~~~~v~~~~~~~iP~ 204 (392)
++++||||++..... +..+ ....|+|+||+.++.+.++++|+
T Consensus 76 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~ 155 (365)
T cd08277 76 NLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP 155 (365)
T ss_pred cCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCC
Confidence 999999998753110 0000 00148999999999999999999
Q ss_pred CCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEE
Q 016265 205 NLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLA 282 (392)
Q Consensus 205 ~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~v 282 (392)
++++++++.+++++.|||+++ +.+++++|++|+|+| +|++|++++|+||. .|+ ++++++++++|++.++++|++++
T Consensus 156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~-~G~~~Vi~~~~~~~~~~~~~~~ga~~~ 233 (365)
T cd08277 156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKI-AGASRIIGVDINEDKFEKAKEFGATDF 233 (365)
T ss_pred CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence 999999999999999999987 568899999999997 79999999999999 498 67788889999999999999999
Q ss_pred EeCCCCc--cc----c-CCCCccEEEecCcc---HHHHHHhcccC-CeEEEEcCCCC-CC---------ceEEE--E-e-
Q 016265 283 IDYTKDN--FE----D-LPEKFDVVYDAIGQ---CDRAVKAIKEG-GTVVALTGAVT-PP---------GFRFV--V-T- 337 (392)
Q Consensus 283 i~~~~~~--~~----~-~~~~~D~vid~~G~---~~~~~~~l~~~-G~iv~~g~~~~-~~---------~~~~~--~-~- 337 (392)
+++.+.+ +. + ..+++|++|||+|. +..++++++++ |+++.+|.... .. ...+. . .
T Consensus 234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~ 313 (365)
T cd08277 234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGG 313 (365)
T ss_pred eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCC
Confidence 9876532 11 1 13579999999983 57899999885 99999986431 10 11111 1 1
Q ss_pred -ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 338 -SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 338 -~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
.....+.+++++++++.++....+++.|+|+|+++||+.+++++. .|+++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred CChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 113468899999999988876667899999999999999998874 688863
No 29
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=6e-40 Score=319.13 Aligned_cols=296 Identities=21% Similarity=0.233 Sum_probs=224.8
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCC-CCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATD-SPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||++++..+ .+ ++++ ++|.|+|+++||||||.++|||++|++.+.|.++..+ ..+|.++|||++|+|+++|++ +
T Consensus 1 mka~~~~~~~-~~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~ 76 (355)
T cd08230 1 MKAIAVKPGK-PG-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S 76 (355)
T ss_pred CceeEecCCC-CC-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence 6899997533 33 7888 8999999999999999999999999999998753221 246789999999999999999 9
Q ss_pred CCCCCCEEEeccccc------ccC--------------CC-CCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHH
Q 016265 163 EFKEGDEVYGDINEK------ALE--------------GP-KQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETA 221 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~------~~~--------------~~-~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta 221 (392)
+|++||||+...... +.. |. ..+|+|+||+.++.+.++++|++++ + ++++..++.++
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~ 154 (355)
T cd08230 77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVV 154 (355)
T ss_pred CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHH
Confidence 999999998653210 000 11 1369999999999999999999999 3 34444454445
Q ss_pred HHHHH-------hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC---CcccHHHHHhcCCcEEEeCCCCccc
Q 016265 222 YEGLE-------RTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATS---STRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 222 ~~al~-------~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~---~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
++++. ....++|++|+|+| +|++|++++|+||++ |++++++++ +++|+++++++|++. +++.++++.
T Consensus 155 ~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~-G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~ 231 (355)
T cd08230 155 EKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLR-GFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVA 231 (355)
T ss_pred HHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchh
Confidence 54442 22367899999998 799999999999995 998888887 678999999999987 566554432
Q ss_pred c--CCCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCC--CCceE-------E-------E--EeecHHHHHHHHH
Q 016265 292 D--LPEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVT--PPGFR-------F-------V--VTSNGEVLKKLNP 348 (392)
Q Consensus 292 ~--~~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~--~~~~~-------~-------~--~~~~~~~~~~~~~ 348 (392)
+ ...++|+||||+|. ++.++++++++|+++.+|.... ...+. + . ......+++++++
T Consensus 232 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~ 311 (355)
T cd08230 232 EVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVE 311 (355)
T ss_pred hhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHH
Confidence 2 23579999999994 5889999999999999986442 11111 0 0 1112456888999
Q ss_pred HHHCCCcc----cccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 349 YLESGKVK----PIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 349 ~l~~g~l~----~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
++.++++. ....++++|+++|+.+||+.++++. +|+||++
T Consensus 312 ~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 312 DLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 99987732 2234678999999999999887654 5999875
No 30
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.4e-39 Score=313.32 Aligned_cols=298 Identities=28% Similarity=0.375 Sum_probs=241.0
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCC-C--CC------CCCCCCCcCCCceeEEE
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK-F--KA------TDSPLPTVPGYDVAGVV 154 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~-~--~~------~~~~~p~v~G~e~~G~V 154 (392)
|||+++.+++. ++++ +++.|+|+++||+||+.++++|++|++.+.+. + +. ....+|.++|||++|+|
T Consensus 1 mka~~~~~~~~---l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V 76 (351)
T cd08233 1 MKAARYHGRKD---IRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV 76 (351)
T ss_pred CceEEEecCCc---eEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence 79999987664 7888 89999999999999999999999999876542 1 10 01236889999999999
Q ss_pred EEeCCCCCCCCCCCEEEecccccc------c------------CCC-CCCCcceeEEEecCCceeeCCCCCCHHhHhccc
Q 016265 155 VKVGTQVKEFKEGDEVYGDINEKA------L------------EGP-KQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLP 215 (392)
Q Consensus 155 ~~vG~~v~~~~vGdrV~~~~~~~~------~------------~~~-~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~ 215 (392)
+++|+++++|++||+|++.....+ . .+. ..+|+|++|+.++...++++|+++++++++.+
T Consensus 77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~- 155 (351)
T cd08233 77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV- 155 (351)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence 999999999999999987432100 0 011 12699999999999999999999999998765
Q ss_pred hhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc--
Q 016265 216 LAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNFED-- 292 (392)
Q Consensus 216 ~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~-- 292 (392)
.++.|||+++..+++++|++|+|+| +|++|++++|+|+.+ |+ ++++++++++++++++++|++.++++++.++.+
T Consensus 156 ~~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~-G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l 233 (351)
T cd08233 156 EPLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEV 233 (351)
T ss_pred cHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHH
Confidence 5778999999888899999999998 799999999999994 99 677788899999999999999999987765432
Q ss_pred --C--CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCc----------eEE--EEeecHHHHHHHHHHHHCC
Q 016265 293 --L--PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPG----------FRF--VVTSNGEVLKKLNPYLESG 353 (392)
Q Consensus 293 --~--~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~----------~~~--~~~~~~~~~~~~~~~l~~g 353 (392)
. .+++|++|||+|. ++.++++++++|+++.+|....+.. ..+ ......+.++++++++++|
T Consensus 234 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g 313 (351)
T cd08233 234 RKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASG 313 (351)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcC
Confidence 1 2469999999973 5889999999999999987542211 111 1122356789999999999
Q ss_pred CcccccCCCcccchhhH-HHHHHHHHhCCCC-eeEEE
Q 016265 354 KVKPIIDPKGPFPFSQV-VEAFSYIETNKAT-GKVVI 388 (392)
Q Consensus 354 ~l~~~~~~t~~~~l~~~-~~A~~~l~~~~~~-gKvvl 388 (392)
++++...++++|+++|+ ++||+.+.+++.. ||+||
T Consensus 314 ~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 314 KIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred CCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 99765556789999996 7999999999875 99987
No 31
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.3e-38 Score=305.32 Aligned_cols=292 Identities=22% Similarity=0.300 Sum_probs=246.3
Q ss_pred eeEEEEcccCCc-ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~-~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||+++.+++.+ +.++++ +++.|.+.++||+||+.++++|+.|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~ 78 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY-KPELPAIGGSEAVGVVDAVGEGVK 78 (324)
T ss_pred CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCCCCCcceEEEEEEeCCCCC
Confidence 799999887764 458888 89999999999999999999999999999887642 234578999999999999999999
Q ss_pred CCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCC
Q 016265 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGS 242 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~ 242 (392)
++++||+|++.. ..|+|++|+.++...++++|+++++++++.+++...|+|+++..+++++|++|+|+|++
T Consensus 79 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~ 149 (324)
T cd08292 79 GLQVGQRVAVAP---------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAG 149 (324)
T ss_pred CCCCCCEEEecc---------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccc
Confidence 999999999864 15899999999999999999999999999998888999999988899999999999989
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCc--cHHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIG--QCDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G--~~~~~~~~l 314 (392)
|.+|++++|+|+. .|++++++++++++.+.++++|+++++++.+.++.+ . ++++|++|||+| ....+++++
T Consensus 150 g~ig~~~~~~a~~-~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l 228 (324)
T cd08292 150 GAVGKLVAMLAAA-RGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLL 228 (324)
T ss_pred cHHHHHHHHHHHH-CCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhh
Confidence 9999999999999 599999999999999999889999999887655432 1 357999999998 357889999
Q ss_pred ccCCeEEEEcCCCC---C--------CceEEEEee------------cHHHHHHHHHHHHCCCcccccCCCcccchhhHH
Q 016265 315 KEGGTVVALTGAVT---P--------PGFRFVVTS------------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVV 371 (392)
Q Consensus 315 ~~~G~iv~~g~~~~---~--------~~~~~~~~~------------~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~ 371 (392)
+++|+++.+|.... . ....+.... ....+.++++++.+|.+++.. .+.|+++|+.
T Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~~~~~~ 306 (324)
T cd08292 229 GEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPV--EAVFDLGDAA 306 (324)
T ss_pred cCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCcc--ccEecHHHHH
Confidence 99999999975421 1 111111100 124578899999999998652 5789999999
Q ss_pred HHHHHHHhCCCCeeEEEE
Q 016265 372 EAFSYIETNKATGKVVIH 389 (392)
Q Consensus 372 ~A~~~l~~~~~~gKvvl~ 389 (392)
+||+.+.++...||++++
T Consensus 307 ~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 307 KAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHcCCCCceEEeC
Confidence 999999988888999874
No 32
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=5.5e-39 Score=310.64 Aligned_cols=298 Identities=31% Similarity=0.407 Sum_probs=224.7
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCC-cCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPT-VPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~-v~G~e~~G~V~~vG~~v~ 162 (392)
|+++++..++.. .+++ +.+.|.+.++||+|||.++|||++|+|.++|..+.. ..|. ++|||++|+|+++| .++
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~--~~~~~i~GHE~~G~V~evG-~~~ 74 (350)
T COG1063 1 MKAAVVYVGGGD--VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV--PPGDIILGHEFVGEVVEVG-VVR 74 (350)
T ss_pred CceeEEEecCCc--cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC--CCCCcccCccceEEEEEec-ccc
Confidence 456666555542 2244 666677899999999999999999999999975432 2344 99999999999999 778
Q ss_pred CCCCCCEEEeccccc------------c-c----------CCCCCCCcceeEEEecCCceee-CCCCCCHHhHhccchhH
Q 016265 163 EFKEGDEVYGDINEK------------A-L----------EGPKQFGSLAEYTAVEERLLAP-KPKNLDFVQAAGLPLAI 218 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~------------~-~----------~~~~~~G~~a~~~~v~~~~~~~-iP~~l~~~~aa~l~~~~ 218 (392)
.+++||||+..+... + + .+...+|+|+||+.+|.+++++ +|+++ ..+++++..++
T Consensus 75 ~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epl 153 (350)
T COG1063 75 GFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPL 153 (350)
T ss_pred CCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChh
Confidence 899999998753311 0 0 1112579999999999755554 58888 55666677777
Q ss_pred HHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeE-EEEeCCcccHHHHHh-cCCcEEEeCCCCccc----
Q 016265 219 ETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASR-VAATSSTRNLEFLKS-LGADLAIDYTKDNFE---- 291 (392)
Q Consensus 219 ~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~v-v~~~~~~~~~~~~~~-~G~~~vi~~~~~~~~---- 291 (392)
.++|++. .....+++++|+|+| +|++|++++++|+.. |+.. |+++.+++|++++++ .|++.+++...++..
T Consensus 154 a~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~-Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~ 231 (350)
T COG1063 154 ATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLL-GASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL 231 (350)
T ss_pred hhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHH
Confidence 7898774 455556666999998 999999999999985 8754 455789999999998 666666665543221
Q ss_pred cC--CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCC-ce----------EEEE--e-ecHHHHHHHHHHHHC
Q 016265 292 DL--PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP-GF----------RFVV--T-SNGEVLKKLNPYLES 352 (392)
Q Consensus 292 ~~--~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~-~~----------~~~~--~-~~~~~~~~~~~~l~~ 352 (392)
+. +.++|++|||+|. +++++++++++|+++.+|...... .+ .+.. . .....++.+++++.+
T Consensus 232 ~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~ 311 (350)
T COG1063 232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLAS 311 (350)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHc
Confidence 12 3479999999994 589999999999999998775332 11 1111 1 234578999999999
Q ss_pred CCcccccCCCcccchhhHHHHHHHHHhCCC-CeeEEEEe
Q 016265 353 GKVKPIIDPKGPFPFSQVVEAFSYIETNKA-TGKVVIHP 390 (392)
Q Consensus 353 g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~-~gKvvl~~ 390 (392)
|++++...+++.++++|+++||+.+.+.+. ..|+++.+
T Consensus 312 g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 312 GKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 999998777899999999999999998655 46988864
No 33
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=4.4e-38 Score=303.40 Aligned_cols=296 Identities=26% Similarity=0.354 Sum_probs=245.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++++++.. ++++ +.+.|+++++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~p~~~g~e~~G~v~~vG~~v~~ 75 (333)
T cd08296 1 YKAVQVTEPGGP--LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG--LSYPRVPGHEVVGRIDAVGEGVSR 75 (333)
T ss_pred CeEEEEccCCCC--ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC--CCCCcccCcceeEEEEEECCCCcc
Confidence 799999987543 7787 89999999999999999999999999999887642 345789999999999999999999
Q ss_pred CCCCCEEEeccc-----c--------------cccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 164 FKEGDEVYGDIN-----E--------------KALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 164 ~~vGdrV~~~~~-----~--------------~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
+++||+|++... . ....+....|+|++|+.++...++++|+++++++++.+++++.|+|++
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 155 (333)
T cd08296 76 WKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNA 155 (333)
T ss_pred CCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHH
Confidence 999999986210 0 000112235899999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccC---CCCccEEE
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVY 301 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~---~~~~D~vi 301 (392)
++...+++|++|+|+| +|++|++++|+||. .|++++++++++++++.++++|+++++++.+.++.+. .+++|++|
T Consensus 156 ~~~~~~~~~~~vlV~g-~g~iG~~~~~~a~~-~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi 233 (333)
T cd08296 156 LRNSGAKPGDLVAVQG-IGGLGHLAVQYAAK-MGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLIL 233 (333)
T ss_pred HHhcCCCCCCEEEEEC-CcHHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEEE
Confidence 9877899999999999 89999999999999 5999999999999999999999999999876554221 24799999
Q ss_pred ecCc---cHHHHHHhcccCCeEEEEcCCCCCCc----------eEEE--EeecHHHHHHHHHHHHCCCcccccCCCcccc
Q 016265 302 DAIG---QCDRAVKAIKEGGTVVALTGAVTPPG----------FRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFP 366 (392)
Q Consensus 302 d~~G---~~~~~~~~l~~~G~iv~~g~~~~~~~----------~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~ 366 (392)
|++| .+..++++++++|+++.+|....... ..+. .......+.+++++++++++++. .+.|+
T Consensus 234 ~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---v~~~~ 310 (333)
T cd08296 234 ATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPM---VETFP 310 (333)
T ss_pred ECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCce---EEEEE
Confidence 9986 46889999999999999986532111 1111 12235678889999999988765 25799
Q ss_pred hhhHHHHHHHHHhCCCCeeEEEE
Q 016265 367 FSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 367 l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
++|+.+||+.+.+++..||+|++
T Consensus 311 ~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 311 LEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHHCCCCceeEEeC
Confidence 99999999999999999999874
No 34
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=9.3e-38 Score=302.77 Aligned_cols=293 Identities=25% Similarity=0.312 Sum_probs=231.3
Q ss_pred cceeEEEEcccC----CcceEEEecc--ccCC-CCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCC--ceeE
Q 016265 82 SEMKAWLYGEYG----GVDVLKFDEK--VTVP-QVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGY--DVAG 152 (392)
Q Consensus 82 ~~mka~v~~~~~----~~~~l~~~~~--~~~p-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~--e~~G 152 (392)
.++|.|++.+.- ..+.|++.+. .+.| ++++||||||+.++++|+.|...+.+... ....|.++|+ |++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~--~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 7 VENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD--SYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC--CCCCCcCCCCeeEeeE
Confidence 346888884322 1255888832 4555 35899999999999999999765443221 1235788998 8899
Q ss_pred EEEEeCCCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCc--ee--eCCCCCCHH-hHhccchhHHHHHHHHH-
Q 016265 153 VVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERL--LA--PKPKNLDFV-QAAGLPLAIETAYEGLE- 226 (392)
Q Consensus 153 ~V~~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~--~~--~iP~~l~~~-~aa~l~~~~~ta~~al~- 226 (392)
+|..+|+++++|++||+|++. |+|+||.+++... ++ ++|++++++ +++.+++++.|||+++.
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~ 152 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYE 152 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec------------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHH
Confidence 999999999999999999863 7899999998753 54 459999987 67788999999999994
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCcEEEeCCCC-cccc-----CCCCccE
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGADLAIDYTKD-NFED-----LPEKFDV 299 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~~vi~~~~~-~~~~-----~~~~~D~ 299 (392)
..++++|++|||+|++|++|++++|+||. .|+++++++++++|+++++ ++|+++++|+.+. ++.+ ..+++|+
T Consensus 153 ~~~~~~g~~VlV~GaaG~vG~~aiqlAk~-~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~ 231 (348)
T PLN03154 153 VCSPKKGDSVFVSAASGAVGQLVGQLAKL-HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDI 231 (348)
T ss_pred hcCCCCCCEEEEecCccHHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEE
Confidence 57899999999999889999999999999 5999888889999999987 7999999998753 4322 1347999
Q ss_pred EEecCc--cHHHHHHhcccCCeEEEEcCCCCCC--------c--------eEEEEee-------cHHHHHHHHHHHHCCC
Q 016265 300 VYDAIG--QCDRAVKAIKEGGTVVALTGAVTPP--------G--------FRFVVTS-------NGEVLKKLNPYLESGK 354 (392)
Q Consensus 300 vid~~G--~~~~~~~~l~~~G~iv~~g~~~~~~--------~--------~~~~~~~-------~~~~~~~~~~~l~~g~ 354 (392)
+|||+| .++.++++++++|+++.+|...... . +.+.... ..+.++++++++++|+
T Consensus 232 v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~ 311 (348)
T PLN03154 232 YFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGK 311 (348)
T ss_pred EEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999998 4688999999999999998543110 0 0111000 1345788999999999
Q ss_pred cccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 016265 355 VKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 355 l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
+++. +...|+|+++++|++.+++++..||+||++.
T Consensus 312 l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 312 IVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred ccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 9875 3357999999999999999999999999874
No 35
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=4.2e-38 Score=304.71 Aligned_cols=281 Identities=23% Similarity=0.318 Sum_probs=222.8
Q ss_pred cceEEEeccccCCCCC-CCeEEEEEeEEecChHhHHhhcCCCC-CCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEe
Q 016265 95 VDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQGKFK-ATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYG 172 (392)
Q Consensus 95 ~~~l~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~ 172 (392)
++.++++ +.+.|+|. +|||||||.|+|||+.|+........ ....++|.++|||++|+|+++|++|++|++||||++
T Consensus 20 ~~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 98 (345)
T cd08293 20 AENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS 98 (345)
T ss_pred ccceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence 3678888 89999874 99999999999999999643321110 011346789999999999999999999999999987
Q ss_pred cccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHh----HhccchhHHHHHHHHH-hcCCCCC--CeEEEEcCCCcH
Q 016265 173 DINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQ----AAGLPLAIETAYEGLE-RTGFSAG--KSILVLNGSGGV 245 (392)
Q Consensus 173 ~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~----aa~l~~~~~ta~~al~-~~~~~~g--~~VlI~Ga~G~v 245 (392)
+. ++|+||++++++.++++|+++++.+ ++++++++.|||+++. .+++++| ++|||+|++|++
T Consensus 99 ~~-----------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~v 167 (345)
T cd08293 99 FN-----------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGAC 167 (345)
T ss_pred cC-----------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHH
Confidence 41 5799999999999999999864332 4556788999999984 5678877 999999988999
Q ss_pred HHHHHHHHHHhcCC-eEEEEeCCcccHHHHHh-cCCcEEEeCCCCcccc-----CCCCccEEEecCcc--HHHHHHhccc
Q 016265 246 GSLVIQLAKQVFGA-SRVAATSSTRNLEFLKS-LGADLAIDYTKDNFED-----LPEKFDVVYDAIGQ--CDRAVKAIKE 316 (392)
Q Consensus 246 G~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~-~G~~~vi~~~~~~~~~-----~~~~~D~vid~~G~--~~~~~~~l~~ 316 (392)
|++++|+||+ .|+ ++++++++++|++++++ +|+++++++.+.++.+ ..+++|++||++|. +..+++++++
T Consensus 168 G~~aiqlAk~-~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~ 246 (345)
T cd08293 168 GSLAGQIGRL-LGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNE 246 (345)
T ss_pred HHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhcc
Confidence 9999999999 598 78888899999999876 9999999987765432 13589999999983 6889999999
Q ss_pred CCeEEEEcCCC---C-----C------------CceEEE---Eeec----HHHHHHHHHHHHCCCcccccCCCcccchhh
Q 016265 317 GGTVVALTGAV---T-----P------------PGFRFV---VTSN----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQ 369 (392)
Q Consensus 317 ~G~iv~~g~~~---~-----~------------~~~~~~---~~~~----~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~ 369 (392)
+|+++.+|... . + ..+.+. .... .+.++++++++++|++++... ..|+++|
T Consensus 247 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~--~~~~l~~ 324 (345)
T cd08293 247 NSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKET--VYEGLEN 324 (345)
T ss_pred CCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeE--EeecHHH
Confidence 99999987321 0 0 011111 0111 244677889999999987633 4569999
Q ss_pred HHHHHHHHHhCCCCeeEEEEe
Q 016265 370 VVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 370 ~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+++||+.+.+++..||+|+++
T Consensus 325 ~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 325 AGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHHhcCCCCCeEEEEC
Confidence 999999999998889999874
No 36
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=7.2e-38 Score=305.14 Aligned_cols=298 Identities=27% Similarity=0.352 Sum_probs=240.5
Q ss_pred eEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC-
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE- 163 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~- 163 (392)
||+++.++++ .++++ +.+.|.|+++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|++|++
T Consensus 2 ka~~~~~~~~--~l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~ 76 (361)
T cd08231 2 RAAVLTGPGK--PLEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR--VPLPIILGHEGVGRVVALGGGVTTD 76 (361)
T ss_pred eEEEEcCCCC--CCEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC--CCCCcccccCCceEEEEeCCCcccc
Confidence 7899998874 37888 89999999999999999999999999999887642 356889999999999999999986
Q ss_pred -----CCCCCEEEecccc----cc--------------cCC-------CCCCCcceeEEEecCC-ceeeCCCCCCHHhHh
Q 016265 164 -----FKEGDEVYGDINE----KA--------------LEG-------PKQFGSLAEYTAVEER-LLAPKPKNLDFVQAA 212 (392)
Q Consensus 164 -----~~vGdrV~~~~~~----~~--------------~~~-------~~~~G~~a~~~~v~~~-~~~~iP~~l~~~~aa 212 (392)
|++||+|++.... +. ..+ ....|+|++|+.++++ .++++|+++++++++
T Consensus 77 ~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa 156 (361)
T cd08231 77 VAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAA 156 (361)
T ss_pred ccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHH
Confidence 9999999886210 00 001 1135999999999986 799999999999999
Q ss_pred ccchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCcc
Q 016265 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNF 290 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~ 290 (392)
.+++++.|||+++.+... ++|++|||+| +|++|++++|+|+.+ |+ +++++++++++.++++++|++.+++++....
T Consensus 157 ~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 234 (361)
T cd08231 157 PANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELPD 234 (361)
T ss_pred HhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCCeEEcCccccc
Confidence 888999999999976554 5999999997 799999999999995 99 8888888999999999999999998765432
Q ss_pred c-------cC--CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCC--C----------ceEE--EEeecHHHHH
Q 016265 291 E-------DL--PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTP--P----------GFRF--VVTSNGEVLK 344 (392)
Q Consensus 291 ~-------~~--~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~--~----------~~~~--~~~~~~~~~~ 344 (392)
. +. .+++|++|||+|. +..++++++++|+++.+|..... . .+.+ ......+.++
T Consensus 235 ~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (361)
T cd08231 235 PQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLY 314 (361)
T ss_pred HHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHH
Confidence 2 11 3579999999973 57899999999999999864311 1 1111 1112356788
Q ss_pred HHHHHHHCC--CcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 345 KLNPYLESG--KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 345 ~~~~~l~~g--~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
++++++.++ .++....+++.|+++|+++||+.++++.. +|+||.|
T Consensus 315 ~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 315 RAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred HHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 899999988 44444455788999999999999988774 7999865
No 37
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=8.8e-38 Score=301.90 Aligned_cols=289 Identities=26% Similarity=0.349 Sum_probs=232.2
Q ss_pred eeEEEEcccCCcceEEEeccccC----CCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCce--eEEEEEe
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTV----PQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDV--AGVVVKV 157 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~----p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~--~G~V~~v 157 (392)
+|+|....+. .+.|+++ +.+. |+|++|||||||.|++||+.|++.+.|.... ....|.++|+++ .|++..+
T Consensus 8 ~~~~~~~~~~-~~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~-~~~~p~~~g~~~~g~~~~~~v 84 (338)
T cd08295 8 LKAYVTGFPK-ESDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS-LYLPPFKPGEVITGYGVAKVV 84 (338)
T ss_pred EecCCCCCCC-ccceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc-ccCCCcCCCCeEeccEEEEEE
Confidence 5666654444 4568888 7776 8899999999999999999999998885321 124577889754 4666668
Q ss_pred CCCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecC-CceeeCC-CCCCHH-hHhccchhHHHHHHHHH-hcCCCCC
Q 016265 158 GTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEE-RLLAPKP-KNLDFV-QAAGLPLAIETAYEGLE-RTGFSAG 233 (392)
Q Consensus 158 G~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~-~~~~~iP-~~l~~~-~aa~l~~~~~ta~~al~-~~~~~~g 233 (392)
|+++++|++||+|++. |+|+||+++++ ..++++| ++++++ +++.+++++.|||+++. ..++++|
T Consensus 85 ~~~v~~~~vGd~V~~~------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g 152 (338)
T cd08295 85 DSGNPDFKVGDLVWGF------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKG 152 (338)
T ss_pred ecCCCCCCCCCEEEec------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCC
Confidence 8999999999999863 68999999999 7999995 678887 78889999999999994 5789999
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cCCcEEEeCCCC-cccc-----CCCCccEEEecCc-
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LGADLAIDYTKD-NFED-----LPEKFDVVYDAIG- 305 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~~vi~~~~~-~~~~-----~~~~~D~vid~~G- 305 (392)
++|||+|++|++|++++|+||. .|++++++++++++.+++++ +|+++++++.+. ++.+ ..+++|++||++|
T Consensus 153 ~~VlI~Ga~G~vG~~aiqlAk~-~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~ 231 (338)
T cd08295 153 ETVFVSAASGAVGQLVGQLAKL-KGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGG 231 (338)
T ss_pred CEEEEecCccHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCH
Confidence 9999999899999999999999 59999988999999999998 999999997543 4322 1358999999998
Q ss_pred -cHHHHHHhcccCCeEEEEcCCCCC--------Cc--------eEE---EEee----cHHHHHHHHHHHHCCCcccccCC
Q 016265 306 -QCDRAVKAIKEGGTVVALTGAVTP--------PG--------FRF---VVTS----NGEVLKKLNPYLESGKVKPIIDP 361 (392)
Q Consensus 306 -~~~~~~~~l~~~G~iv~~g~~~~~--------~~--------~~~---~~~~----~~~~~~~~~~~l~~g~l~~~~~~ 361 (392)
.+..++++++++|+++.+|..... .. +.+ .... ..+.++++++++.+|++++...
T Consensus 232 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~- 310 (338)
T cd08295 232 KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVED- 310 (338)
T ss_pred HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceee-
Confidence 468899999999999998753210 00 011 1111 1245788899999999987633
Q ss_pred CcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 362 KGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 362 t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
..|+++++++|++.+++++..||+|+++
T Consensus 311 -~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 311 -IADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred -cccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 4599999999999999999899999864
No 38
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.2e-37 Score=299.17 Aligned_cols=284 Identities=24% Similarity=0.334 Sum_probs=230.6
Q ss_pred ceeEEEEcc-c-CCc--ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeC
Q 016265 83 EMKAWLYGE-Y-GGV--DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVG 158 (392)
Q Consensus 83 ~mka~v~~~-~-~~~--~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG 158 (392)
+||+|++.+ + +.. +.++++ +.+.|+|++|||+|||.++|||+.|.+...+ ...+|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~-----~~~~p~v~G~e~~G~V~~-- 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR-----LNEGDTMIGTQVAKVIES-- 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc-----CCCCCcEecceEEEEEec--
Confidence 589999988 3 444 778999 8999999999999999999999987652211 123578999999999985
Q ss_pred CCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecCC---ceeeCCCCCCH-----HhHhccchhHHHHHHHH-HhcC
Q 016265 159 TQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEER---LLAPKPKNLDF-----VQAAGLPLAIETAYEGL-ERTG 229 (392)
Q Consensus 159 ~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~---~~~~iP~~l~~-----~~aa~l~~~~~ta~~al-~~~~ 229 (392)
.+++|++||||++. ++|++|++++.+ .++++|+++++ ..++++++++.|||+++ +..+
T Consensus 74 -~~~~~~~Gd~V~~~------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~ 140 (329)
T cd08294 74 -KNSKFPVGTIVVAS------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICK 140 (329)
T ss_pred -CCCCCCCCCEEEee------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcC
Confidence 45689999999973 578999999999 99999999982 33346788999999998 5688
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc-----CCCCccEEEecC
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAI 304 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~-----~~~~~D~vid~~ 304 (392)
+++|++|||+||+|++|++++|+|+. .|+++++++++++++++++++|+++++++.+.++.+ ..+++|++||++
T Consensus 141 ~~~g~~vlI~ga~g~vG~~aiqlA~~-~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~ 219 (329)
T cd08294 141 PKAGETVVVNGAAGAVGSLVGQIAKI-KGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNV 219 (329)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECC
Confidence 99999999999999999999999999 599999899999999999999999999998766532 135799999999
Q ss_pred c--cHHHHHHhcccCCeEEEEcCCC---CC-----C---------ceEEEE--e-----ecHHHHHHHHHHHHCCCcccc
Q 016265 305 G--QCDRAVKAIKEGGTVVALTGAV---TP-----P---------GFRFVV--T-----SNGEVLKKLNPYLESGKVKPI 358 (392)
Q Consensus 305 G--~~~~~~~~l~~~G~iv~~g~~~---~~-----~---------~~~~~~--~-----~~~~~~~~~~~~l~~g~l~~~ 358 (392)
| .+..++++++++|+++.+|... .. . .+.+.. . ...+.++++++++++|++++.
T Consensus 220 g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~ 299 (329)
T cd08294 220 GGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR 299 (329)
T ss_pred CHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC
Confidence 8 3688999999999999887421 00 0 011111 0 012346788899999999876
Q ss_pred cCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 359 IDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 359 ~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
.. ..|+++++++|++.+++++..||+|+++
T Consensus 300 ~~--~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 300 EH--VTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred cc--cccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 33 4689999999999999999899999864
No 39
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.3e-37 Score=298.93 Aligned_cols=296 Identities=27% Similarity=0.398 Sum_probs=249.3
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
+||++++.+++.+..++++ +++.|.++++||+||+.++|+|++|++...|.++. ..+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~vG~~v~ 77 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP--PSLPSGLGTEAAGVVSKVGSGVK 77 (327)
T ss_pred CceEEEEeccCChhHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC--CCCCCccCcceEEEEEEeCCCCC
Confidence 5899999998888789998 88999999999999999999999999998887642 33578899999999999999999
Q ss_pred CCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcC
Q 016265 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNG 241 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga 241 (392)
.+++||+|++... ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++. ...+++|++|+|+|+
T Consensus 78 ~~~~Gd~V~~~~~--------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~ 149 (327)
T PRK10754 78 HIKVGDRVVYAQS--------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA 149 (327)
T ss_pred CCCCCCEEEECCC--------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 9999999986421 2589999999999999999999999999998889999999985 477899999999999
Q ss_pred CCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCcc--HHHHHHh
Q 016265 242 SGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIGQ--CDRAVKA 313 (392)
Q Consensus 242 ~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G~--~~~~~~~ 313 (392)
+|.+|++++|+||. .|++++.++.+++++++++++|++++++.++.++.+ . .+++|++|||+|. ...++++
T Consensus 150 ~g~ig~~~~~lak~-~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~ 228 (327)
T PRK10754 150 AGGVGLIACQWAKA-LGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDC 228 (327)
T ss_pred CcHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHH
Confidence 99999999999999 599999999999999999999999999877655422 1 3579999999983 5788999
Q ss_pred cccCCeEEEEcCCCCC-C--ce--------EEEEe-------ec----HHHHHHHHHHHHCCCcccccCCCcccchhhHH
Q 016265 314 IKEGGTVVALTGAVTP-P--GF--------RFVVT-------SN----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVV 371 (392)
Q Consensus 314 l~~~G~iv~~g~~~~~-~--~~--------~~~~~-------~~----~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~ 371 (392)
++++|+++.+|..... . .+ .+... .+ ...+.++++++++|++++....++.|+++++.
T Consensus 229 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~ 308 (327)
T PRK10754 229 LQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQ 308 (327)
T ss_pred hccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHH
Confidence 9999999999854311 1 10 11100 01 23356788999999998765567899999999
Q ss_pred HHHHHHHhCCCCeeEEEEe
Q 016265 372 EAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 372 ~A~~~l~~~~~~gKvvl~~ 390 (392)
++++.+.+++..+|+|+.+
T Consensus 309 ~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 309 RAHEILESRATQGSSLLIP 327 (327)
T ss_pred HHHHHHHcCCCcceEEEeC
Confidence 9999999999899999975
No 40
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=4.6e-38 Score=280.63 Aligned_cols=300 Identities=29% Similarity=0.409 Sum_probs=247.7
Q ss_pred CCCCcceeEEEEcccCCc-ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEE
Q 016265 78 GTVPSEMKAWLYGEYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVK 156 (392)
Q Consensus 78 ~~~p~~mka~v~~~~~~~-~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~ 156 (392)
+.||...|+++|.++|++ +++++. +.++|.....+|+|+..|+.|||+|+..++|.|| ..+++|.+-|+|++|+|+.
T Consensus 14 ~q~~~~~kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYp-vrP~~PAVgGnEGv~eVv~ 91 (354)
T KOG0025|consen 14 SQMPARSKALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYP-VRPELPAVGGNEGVGEVVA 91 (354)
T ss_pred cccccccceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccC-CCCCCCcccCCcceEEEEE
Confidence 345666799999999987 788999 8999998888899999999999999999999998 4567899999999999999
Q ss_pred eCCCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-cCCCCCCe
Q 016265 157 VGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKS 235 (392)
Q Consensus 157 vG~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~g~~ 235 (392)
+|+++++|++||+|+.... ..|+|++|.+.+++.++++++.++++.||++..+.+|||+.|.+ .++.+||+
T Consensus 92 vGs~vkgfk~Gd~VIp~~a--------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~ 163 (354)
T KOG0025|consen 92 VGSNVKGFKPGDWVIPLSA--------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDS 163 (354)
T ss_pred ecCCcCccCCCCeEeecCC--------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCe
Confidence 9999999999999998653 36999999999999999999999999999999999999999964 68999999
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHH----HHhcCCcEEEeCCCCc---ccc---CCCCccEEEecCc
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEF----LKSLGADLAIDYTKDN---FED---LPEKFDVVYDAIG 305 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~----~~~~G~~~vi~~~~~~---~~~---~~~~~D~vid~~G 305 (392)
|+..||.+++|++.+|+||+ +|.+.|.++++....+. ++++||++||.-.+.. ... ...++.+.|||+|
T Consensus 164 vIQNganS~VG~~ViQlaka-~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVG 242 (354)
T KOG0025|consen 164 VIQNGANSGVGQAVIQLAKA-LGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVG 242 (354)
T ss_pred eeecCcccHHHHHHHHHHHH-hCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccC
Confidence 99999999999999999999 59999999987766554 4679999998643321 111 2346899999998
Q ss_pred --cHHHHHHhcccCCeEEEEcCCCCC-CceE-------------EEEe----------ecHHHHHHHHHHHHCCCccccc
Q 016265 306 --QCDRAVKAIKEGGTVVALTGAVTP-PGFR-------------FVVT----------SNGEVLKKLNPYLESGKVKPII 359 (392)
Q Consensus 306 --~~~~~~~~l~~~G~iv~~g~~~~~-~~~~-------------~~~~----------~~~~~~~~~~~~l~~g~l~~~~ 359 (392)
+.....+.|..||.++.+|+.... ..+. |.+. ...+.+.++.+|++.|++....
T Consensus 243 Gksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~ 322 (354)
T KOG0025|consen 243 GKSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN 322 (354)
T ss_pred chhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc
Confidence 467888999999999999988722 1111 1110 1134578899999999998763
Q ss_pred CCCcccchhhHHHHHHHHHhCCC-CeeEEEEe
Q 016265 360 DPKGPFPFSQVVEAFSYIETNKA-TGKVVIHP 390 (392)
Q Consensus 360 ~~t~~~~l~~~~~A~~~l~~~~~-~gKvvl~~ 390 (392)
....+|++...|++...+... .||-++.+
T Consensus 323 --~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 323 --CEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred --ceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 356899999999887655443 36766654
No 41
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.6e-37 Score=299.60 Aligned_cols=303 Identities=33% Similarity=0.493 Sum_probs=243.9
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCC------------------CCCCCCCc
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA------------------TDSPLPTV 145 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~------------------~~~~~p~v 145 (392)
||++++.+++..+.+.+.++.+.|.+.+++|+||+.++++|++|++.+.|.++. ....+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 789999877765556666345778889999999999999999999988876531 12456889
Q ss_pred CCCceeEEEEEeCCCCCCCCCCCEEEecccccc----------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccc
Q 016265 146 PGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKA----------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLP 215 (392)
Q Consensus 146 ~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~----------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~ 215 (392)
+|||++|+|+++|+++++|++||+|++.....+ ..+...+|+|++|+.++...++++|+++++++++.++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~ 160 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP 160 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence 999999999999999999999999988431111 1122235999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc---
Q 016265 216 LAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED--- 292 (392)
Q Consensus 216 ~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~--- 292 (392)
+++.|||++++..++++|++|+|+|++|++|++++++|+.+ |+++++++.++ +++.++++|++.+++.....+.+
T Consensus 161 ~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (350)
T cd08274 161 CSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRR-GAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAKA 238 (350)
T ss_pred cHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHHh
Confidence 99999999998888999999999998899999999999995 99988887665 88889999998766654433211
Q ss_pred -CCCCccEEEecCc--cHHHHHHhcccCCeEEEEcCCCCC-Cc----------eEE--EEeecHHHHHHHHHHHHCCCcc
Q 016265 293 -LPEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP-PG----------FRF--VVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 293 -~~~~~D~vid~~G--~~~~~~~~l~~~G~iv~~g~~~~~-~~----------~~~--~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
..+++|++||++| .++.++++++++|+++.+|..... .. ..+ ......+.+.++++++.+++++
T Consensus 239 ~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 318 (350)
T cd08274 239 LGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEIR 318 (350)
T ss_pred hCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCcc
Confidence 2357999999998 468899999999999998743211 11 111 1112357789999999999987
Q ss_pred cccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 357 PIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 357 ~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+. +++.|+++++.+||+.+.++...||+|+.|
T Consensus 319 ~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 319 PV--VAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cc--cccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 64 567899999999999999888889999865
No 42
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.6e-37 Score=298.55 Aligned_cols=299 Identities=22% Similarity=0.273 Sum_probs=239.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++. ++++ +++.|.|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++|+.
T Consensus 1 m~a~~~~~~~~---~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 74 (339)
T PRK10083 1 MKSIVIEKPNS---LAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVDA 74 (339)
T ss_pred CeEEEEecCCe---eEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc--CCCCcccccceEEEEEEECCCCcc
Confidence 78999987664 7888 89999999999999999999999999999887642 246889999999999999999999
Q ss_pred CCCCCEEEeccccccc------C------------CCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINEKAL------E------------GPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~------~------------~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++||+|+......+. . +...+|+|+||+.++...++++|+++++++++ +..++.++|+++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~ 153 (339)
T PRK10083 75 ARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT 153 (339)
T ss_pred CCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH
Confidence 9999999853211100 0 11235899999999999999999999998876 556677888777
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEE-EEeCCcccHHHHHhcCCcEEEeCCCCccccC----CCCccEE
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRV-AATSSTRNLEFLKSLGADLAIDYTKDNFEDL----PEKFDVV 300 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv-~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~----~~~~D~v 300 (392)
+..++++|++|+|+| +|++|++++|+|+.++|++++ +++++++|+++++++|+++++++++..+.+. +.++|++
T Consensus 154 ~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~v 232 (339)
T PRK10083 154 GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLI 232 (339)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEE
Confidence 788999999999999 899999999999963498744 5567888999999999999999876544321 2246799
Q ss_pred EecCc---cHHHHHHhcccCCeEEEEcCCCCCCc----------eEEE-EeecHHHHHHHHHHHHCCCcccccCCCcccc
Q 016265 301 YDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG----------FRFV-VTSNGEVLKKLNPYLESGKVKPIIDPKGPFP 366 (392)
Q Consensus 301 id~~G---~~~~~~~~l~~~G~iv~~g~~~~~~~----------~~~~-~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~ 366 (392)
||++| .+..++++++++|+++.+|....... +.+. .....+.+.++++++++|++++...+++.|+
T Consensus 233 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 312 (339)
T PRK10083 233 IDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFD 312 (339)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeeec
Confidence 99998 36889999999999999986432111 1111 1123567889999999999987544568899
Q ss_pred hhhHHHHHHHHHhCC-CCeeEEEEe
Q 016265 367 FSQVVEAFSYIETNK-ATGKVVIHP 390 (392)
Q Consensus 367 l~~~~~A~~~l~~~~-~~gKvvl~~ 390 (392)
++++++|++.++++. ..+|+++.+
T Consensus 313 l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 313 FQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEec
Confidence 999999999998654 458999876
No 43
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.5e-37 Score=300.24 Aligned_cols=299 Identities=26% Similarity=0.327 Sum_probs=242.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++. ++++ +.+.|.+.++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 mka~~~~~~~~---~~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~--~~~~~~~G~e~~G~V~~vG~~v~~ 74 (351)
T cd08285 1 MKAFAMLGIGK---VGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG--ERHGMILGHEAVGVVEEVGSEVKD 74 (351)
T ss_pred CceEEEccCCc---cEEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC--CCCCcccCcceEEEEEEecCCcCc
Confidence 79999988775 5677 78889999999999999999999999988876532 345889999999999999999999
Q ss_pred CCCCCEEEecccccc---------------------cCCCCCCCcceeEEEecCC--ceeeCCCCCCHHhHhccchhHHH
Q 016265 164 FKEGDEVYGDINEKA---------------------LEGPKQFGSLAEYTAVEER--LLAPKPKNLDFVQAAGLPLAIET 220 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~---------------------~~~~~~~G~~a~~~~v~~~--~~~~iP~~l~~~~aa~l~~~~~t 220 (392)
+++||+|++.....+ ..+...+|+|+||+.++.. .++++|+++++++++.+++.+.|
T Consensus 75 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~t 154 (351)
T cd08285 75 FKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMST 154 (351)
T ss_pred cCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhh
Confidence 999999997431000 0011236999999999974 89999999999999999999999
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--
Q 016265 221 AYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L-- 293 (392)
Q Consensus 221 a~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~-- 293 (392)
||++++.+.+++|++|||+| +|++|++++|+||.+ |+. +++++++++|+++++++|+++++++.+.++.+ .
T Consensus 155 a~~~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~ 232 (351)
T cd08285 155 GFHGAELANIKLGDTVAVFG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTG 232 (351)
T ss_pred HHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhC
Confidence 99998888999999999996 899999999999995 995 66677788899999999999999987655422 1
Q ss_pred CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCC--ce------------EEE--E-eecHHHHHHHHHHHHCC
Q 016265 294 PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP--GF------------RFV--V-TSNGEVLKKLNPYLESG 353 (392)
Q Consensus 294 ~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~--~~------------~~~--~-~~~~~~~~~~~~~l~~g 353 (392)
.+++|++|||+|. +..++++++++|+++.+|...... .+ .+. . ....+.++++++++++|
T Consensus 233 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g 312 (351)
T cd08285 233 GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYG 312 (351)
T ss_pred CCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcC
Confidence 3579999999983 588999999999999987544211 11 011 1 11346788999999999
Q ss_pred Cccccc-CCCcccchhhHHHHHHHHHhCCC-CeeEEEEe
Q 016265 354 KVKPII-DPKGPFPFSQVVEAFSYIETNKA-TGKVVIHP 390 (392)
Q Consensus 354 ~l~~~~-~~t~~~~l~~~~~A~~~l~~~~~-~gKvvl~~ 390 (392)
++++.. ...+.|+++|+++|++.+++++. .+|++|++
T Consensus 313 ~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 313 RVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 998832 33456999999999999999874 58999864
No 44
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=4.7e-37 Score=295.19 Aligned_cols=273 Identities=24% Similarity=0.350 Sum_probs=223.2
Q ss_pred CCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEe
Q 016265 93 GGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYG 172 (392)
Q Consensus 93 ~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~ 172 (392)
..++.+++. +.+.|+|++|||||||.++|||+.|+ .|.++. ...|.++|+|++|+|+++|+ +|++||||++
T Consensus 14 ~~~~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~--~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~ 84 (325)
T TIGR02825 14 PTDSDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAKRL--KEGDTMMGQQVARVVESKNV---ALPKGTIVLA 84 (325)
T ss_pred CCCCceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccCcC--CCCCcEecceEEEEEEeCCC---CCCCCCEEEE
Confidence 344678888 89999999999999999999999764 343321 22467999999999999874 6999999997
Q ss_pred cccccccCCCCCCCcceeEEEecCCceeeC----CCCCCHHhH-hccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHH
Q 016265 173 DINEKALEGPKQFGSLAEYTAVEERLLAPK----PKNLDFVQA-AGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVG 246 (392)
Q Consensus 173 ~~~~~~~~~~~~~G~~a~~~~v~~~~~~~i----P~~l~~~~a-a~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG 246 (392)
. ++|++|++++.+.+.++ |++++++++ +++++++.|||+++ +.+++++|++|||+|++|++|
T Consensus 85 ~------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG 152 (325)
T TIGR02825 85 S------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVG 152 (325)
T ss_pred e------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHH
Confidence 3 46999999999888777 999999997 67899999999998 578899999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCC-cccc-----CCCCccEEEecCc--cHHHHHHhcccCC
Q 016265 247 SLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKD-NFED-----LPEKFDVVYDAIG--QCDRAVKAIKEGG 318 (392)
Q Consensus 247 ~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~-~~~~-----~~~~~D~vid~~G--~~~~~~~~l~~~G 318 (392)
++++|+||. .|+++++++++++++++++++|+++++++++. .+.+ ..+++|++||++| .++.++++++++|
T Consensus 153 ~~aiqlAk~-~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G 231 (325)
T TIGR02825 153 SVVGQIAKL-KGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFG 231 (325)
T ss_pred HHHHHHHHH-cCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCc
Confidence 999999999 59999999999999999999999999998763 3322 1357999999998 4688999999999
Q ss_pred eEEEEcCCC-------CCC----------ceEEEE-e--e-----cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHH
Q 016265 319 TVVALTGAV-------TPP----------GFRFVV-T--S-----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEA 373 (392)
Q Consensus 319 ~iv~~g~~~-------~~~----------~~~~~~-~--~-----~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A 373 (392)
+++.+|... .+. .+.+.. . . ..+.++++++++++|++++... ..|+++++++|
T Consensus 232 ~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A 309 (325)
T TIGR02825 232 RIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEY--VIEGFENMPAA 309 (325)
T ss_pred EEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCccccee--ccccHHHHHHH
Confidence 999987532 110 011110 0 0 1346788999999999987633 46899999999
Q ss_pred HHHHHhCCCCeeEEEE
Q 016265 374 FSYIETNKATGKVVIH 389 (392)
Q Consensus 374 ~~~l~~~~~~gKvvl~ 389 (392)
++.+++++..||+|++
T Consensus 310 ~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 310 FMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHhcCCCCCeEEeC
Confidence 9999999988999874
No 45
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=6.2e-37 Score=295.91 Aligned_cols=298 Identities=30% Similarity=0.410 Sum_probs=244.9
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCC-CCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||+++.+++.. +++. +.+.|+++++||+|++.++++|++|++.+.|.++. ....+|.++|||++|+|+++|+++.
T Consensus 1 ~ka~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~ 77 (340)
T cd05284 1 MKAARLYEYGKP--LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD 77 (340)
T ss_pred CeeeEeccCCCC--ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence 799999987643 6777 78899999999999999999999999998887643 2345678999999999999999999
Q ss_pred CCCCCCEEEecccccc------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 163 EFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
++++||+|++.....+ ..+...+|+|++|+.++.+.++++|+++++++++.+++++.|||++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~ 157 (340)
T cd05284 78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA 157 (340)
T ss_pred cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 9999999998642100 0122346899999999999999999999999999999999999999
Q ss_pred HHh--cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CC
Q 016265 225 LER--TGFSAGKSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PE 295 (392)
Q Consensus 225 l~~--~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~ 295 (392)
+.. ..+.+|++|||+| +|++|++++|+|+.+ | .+++++++++++.+.++++|+++++++++. +.+ . ..
T Consensus 158 l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~ 234 (340)
T cd05284 158 VKKALPYLDPGSTVVVIG-VGGLGHIAVQILRAL-TPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGR 234 (340)
T ss_pred HHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCC
Confidence 965 3688899999999 677999999999995 7 789888889999999999999999998765 322 1 24
Q ss_pred CccEEEecCcc---HHHHHHhcccCCeEEEEcCCCC-C--------CceEEE--EeecHHHHHHHHHHHHCCCcccccCC
Q 016265 296 KFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVT-P--------PGFRFV--VTSNGEVLKKLNPYLESGKVKPIIDP 361 (392)
Q Consensus 296 ~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~-~--------~~~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~ 361 (392)
++|+++|++|. .+.++++++++|+++.++.... . ....+. .......+.++++++++|.+++ +
T Consensus 235 ~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~---~ 311 (340)
T cd05284 235 GADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKV---E 311 (340)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCc---c
Confidence 79999999983 5889999999999999975431 1 111221 1124567889999999999875 3
Q ss_pred CcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 362 KGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 362 t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
.+.|+++++++|++.+.+++..||+++.|
T Consensus 312 ~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 312 ITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 46799999999999999999889999864
No 46
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1e-36 Score=300.38 Aligned_cols=310 Identities=29% Similarity=0.443 Sum_probs=244.8
Q ss_pred CCCCCCcceeEEEEc--ccCCc-ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCC--------CCCCCC
Q 016265 76 KVGTVPSEMKAWLYG--EYGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT--------DSPLPT 144 (392)
Q Consensus 76 ~~~~~p~~mka~v~~--~~~~~-~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~--------~~~~p~ 144 (392)
+...+|.+|||+++. +.+.+ ..++++ +.+.|.++++||+||+.+++||++|++...|..... ....+.
T Consensus 5 ~~~~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~ 83 (393)
T cd08246 5 PLGVVPEKMYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH 83 (393)
T ss_pred CCCcCchhhhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence 344589999999985 34433 347888 889999999999999999999999999877641100 011235
Q ss_pred cCCCceeEEEEEeCCCCCCCCCCCEEEecccccc------c------------CCC-CCCCcceeEEEecCCceeeCCCC
Q 016265 145 VPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKA------L------------EGP-KQFGSLAEYTAVEERLLAPKPKN 205 (392)
Q Consensus 145 v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~------~------------~~~-~~~G~~a~~~~v~~~~~~~iP~~ 205 (392)
++|||++|+|+++|++++.+++||+|++.....+ . .|. ..+|+|++|++++...++++|++
T Consensus 84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~ 163 (393)
T cd08246 84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKH 163 (393)
T ss_pred ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCC
Confidence 8999999999999999999999999988642100 0 010 13599999999999999999999
Q ss_pred CCHHhHhccchhHHHHHHHHHh---cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE
Q 016265 206 LDFVQAAGLPLAIETAYEGLER---TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA 282 (392)
Q Consensus 206 l~~~~aa~l~~~~~ta~~al~~---~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v 282 (392)
+++++++.+++++.|||+++.. +++++|++|+|+|++|++|++++++|+. .|+++++++++++|+++++++|++++
T Consensus 164 l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~-~G~~vv~~~~s~~~~~~~~~~G~~~~ 242 (393)
T cd08246 164 LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARA-AGANPVAVVSSEEKAEYCRALGAEGV 242 (393)
T ss_pred CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999999853 6789999999999889999999999999 49999999999999999999999999
Q ss_pred EeCCCCc----------------------cc----cC--CC-CccEEEecCc--cHHHHHHhcccCCeEEEEcCCCC-CC
Q 016265 283 IDYTKDN----------------------FE----DL--PE-KFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT-PP 330 (392)
Q Consensus 283 i~~~~~~----------------------~~----~~--~~-~~D~vid~~G--~~~~~~~~l~~~G~iv~~g~~~~-~~ 330 (392)
+++++.+ +. +. .. ++|++|||+| .++.++++++++|+++.+|.... ..
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 322 (393)
T cd08246 243 INRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNH 322 (393)
T ss_pred EcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCC
Confidence 9874431 10 11 23 7999999998 36889999999999999975431 11
Q ss_pred ceE----------EE--EeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhC-CCCeeEEEE
Q 016265 331 GFR----------FV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETN-KATGKVVIH 389 (392)
Q Consensus 331 ~~~----------~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~-~~~gKvvl~ 389 (392)
.+. .. .....+.+.+++++++++.+.+. +++.|+++|+++||+.+.++ +..||+++-
T Consensus 323 ~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 323 TYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPC--LSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceee--eeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 111 00 01123478889999999998854 56889999999999999998 788998863
No 47
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.4e-36 Score=292.77 Aligned_cols=295 Identities=32% Similarity=0.495 Sum_probs=239.8
Q ss_pred eEEEEccc---CCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCC
Q 016265 85 KAWLYGEY---GGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (392)
Q Consensus 85 ka~v~~~~---~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v 161 (392)
|||++.++ +.++.+++. ++|.|+|+++||+||+.++++|+.|++.+.|..+. ..+|.++|||++|+|+++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v 77 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE--AGQPKILGWDAAGVVVAVGDEV 77 (336)
T ss_pred CceeeccccCCCCcccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC--CCCCcccceeeEEEEEEeCCCC
Confidence 68899887 667788888 89999999999999999999999999988886532 3467899999999999999999
Q ss_pred CCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCC-----CCe
Q 016265 162 KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSA-----GKS 235 (392)
Q Consensus 162 ~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~-----g~~ 235 (392)
+.|++||+|++... ....|+|++|++++++.++++|+++++++++.+++++.|||+++ ...++++ |++
T Consensus 78 ~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~ 151 (336)
T TIGR02817 78 TLFKPGDEVWYAGD------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRA 151 (336)
T ss_pred CCCCCCCEEEEcCC------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCE
Confidence 99999999998531 11258999999999999999999999999999999999999998 4577776 999
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C-CCCccEEEecCc---cH
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L-PEKFDVVYDAIG---QC 307 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~-~~~~D~vid~~G---~~ 307 (392)
|||+|++|++|++++|+||.++|++++++++++++.++++++|+++++++.. ++.+ . .+++|+++|++| ..
T Consensus 152 vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~ 230 (336)
T TIGR02817 152 LLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHF 230 (336)
T ss_pred EEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHH
Confidence 9999999999999999999833999999999999999999999999998654 2211 2 347999999975 36
Q ss_pred HHHHHhcccCCeEEEEcCCCC-C------CceEEE---Ee--e---------cHHHHHHHHHHHHCCCcccccC-CCccc
Q 016265 308 DRAVKAIKEGGTVVALTGAVT-P------PGFRFV---VT--S---------NGEVLKKLNPYLESGKVKPIID-PKGPF 365 (392)
Q Consensus 308 ~~~~~~l~~~G~iv~~g~~~~-~------~~~~~~---~~--~---------~~~~~~~~~~~l~~g~l~~~~~-~t~~~ 365 (392)
..++++++++|+++.++.... . ....+. +. . ....++++++++.++.+++.+. ....+
T Consensus 231 ~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 310 (336)
T TIGR02817 231 KEIVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTI 310 (336)
T ss_pred HHHHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCC
Confidence 889999999999998854320 0 111111 10 0 0145788999999999876422 11224
Q ss_pred chhhHHHHHHHHHhCCCCeeEEEE
Q 016265 366 PFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 366 ~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
+++++++||+.+.+++..||++++
T Consensus 311 ~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 311 NAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred CHHHHHHHHHHHHcCCccceEEEe
Confidence 579999999999999988999875
No 48
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.7e-36 Score=298.14 Aligned_cols=299 Identities=25% Similarity=0.343 Sum_probs=241.0
Q ss_pred eeEEEEcccCCcceEEEeccccCCCC-CCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||+++.+++. ++++ +++.|.| ++++|+||+.+++||++|++.+.|.++. .++|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~---~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~ 74 (386)
T cd08283 1 MKALVWHGKGD---VRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG--MKKGDILGHEFMGVVEEVGPEVR 74 (386)
T ss_pred CeeEEEecCCC---ceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC--CCCCccccccceEEEEEeCCCCC
Confidence 79999986544 7888 8899988 4999999999999999999999998753 34688999999999999999999
Q ss_pred CCCCCCEEEeccccc------c---------------------------cCC-----CCCCCcceeEEEecCC--ceeeC
Q 016265 163 EFKEGDEVYGDINEK------A---------------------------LEG-----PKQFGSLAEYTAVEER--LLAPK 202 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~------~---------------------------~~~-----~~~~G~~a~~~~v~~~--~~~~i 202 (392)
++++||+|++..... + ..+ ....|+|++|++++.+ .++++
T Consensus 75 ~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l 154 (386)
T cd08283 75 NLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKI 154 (386)
T ss_pred CCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEEC
Confidence 999999998853110 0 000 0136899999999988 89999
Q ss_pred CCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcE
Q 016265 203 PKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADL 281 (392)
Q Consensus 203 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~ 281 (392)
|+++++++++.++.++.|||++++.+++++|++|+|+| +|++|++++++|+. .|+. +++++.++++++.+++++...
T Consensus 155 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g-~G~vG~~~~~la~~-~g~~~vi~~~~~~~~~~~~~~~~~~~ 232 (386)
T cd08283 155 PDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWG-CGPVGLFAARSAKL-LGAERVIAIDRVPERLEMARSHLGAE 232 (386)
T ss_pred CCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence 99999999999999999999999878899999999996 79999999999999 4984 778888999999999985456
Q ss_pred EEeCCCCc-ccc----C--CCCccEEEecCc------------------------cHHHHHHhcccCCeEEEEcCCCC-C
Q 016265 282 AIDYTKDN-FED----L--PEKFDVVYDAIG------------------------QCDRAVKAIKEGGTVVALTGAVT-P 329 (392)
Q Consensus 282 vi~~~~~~-~~~----~--~~~~D~vid~~G------------------------~~~~~~~~l~~~G~iv~~g~~~~-~ 329 (392)
++++...+ +.+ . .+++|++|||+| .++.++++++++|+++.++.... .
T Consensus 233 vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~ 312 (386)
T cd08283 233 TINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTV 312 (386)
T ss_pred EEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCc
Confidence 77776553 322 1 237999999986 25788999999999999976432 1
Q ss_pred C----------ceEEE--EeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCC-CCeeEEEEe
Q 016265 330 P----------GFRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNK-ATGKVVIHP 390 (392)
Q Consensus 330 ~----------~~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~-~~gKvvl~~ 390 (392)
. .+.+. .....+.++++++++.++++.+....++.|+++++++||+.+.++. ..+|++|++
T Consensus 313 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 313 NKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred CccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 1 11111 1123467889999999999987644567899999999999998877 458999864
No 49
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.3e-36 Score=298.33 Aligned_cols=309 Identities=30% Similarity=0.444 Sum_probs=246.1
Q ss_pred CCCcceeEEEEcc--cCCc-ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCC--------CCCCCC-CcC
Q 016265 79 TVPSEMKAWLYGE--YGGV-DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA--------TDSPLP-TVP 146 (392)
Q Consensus 79 ~~p~~mka~v~~~--~~~~-~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--------~~~~~p-~v~ 146 (392)
-+|++||||++.. ++++ +.+++. +.+.|.|+++||+||+.++++|++|++...+.... .....| .++
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 81 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII 81 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence 3678899999954 5654 568888 89999999999999999999999998877654210 001123 379
Q ss_pred CCceeEEEEEeCCCCCCCCCCCEEEecccccc------c------------CC-CCCCCcceeEEEecCCceeeCCCCCC
Q 016265 147 GYDVAGVVVKVGTQVKEFKEGDEVYGDINEKA------L------------EG-PKQFGSLAEYTAVEERLLAPKPKNLD 207 (392)
Q Consensus 147 G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~------~------------~~-~~~~G~~a~~~~v~~~~~~~iP~~l~ 207 (392)
|||++|+|+++|++++.+++||+|++.....+ . .| ...+|+|+||+.++.+.++++|++++
T Consensus 82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~ 161 (398)
T TIGR01751 82 GSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLT 161 (398)
T ss_pred ccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCC
Confidence 99999999999999999999999988542100 0 00 11358999999999999999999999
Q ss_pred HHhHhccchhHHHHHHHHHh---cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEe
Q 016265 208 FVQAAGLPLAIETAYEGLER---TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAID 284 (392)
Q Consensus 208 ~~~aa~l~~~~~ta~~al~~---~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~ 284 (392)
+++++.+++++.|||+++.. .++.+|++|+|+|++|++|++++|+|+. .|+++++++.++++++.++++|++.++|
T Consensus 162 ~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~-~G~~vi~~~~~~~~~~~~~~~g~~~~v~ 240 (398)
T TIGR01751 162 WEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARA-GGGNPVAVVSSPEKAEYCRELGAEAVID 240 (398)
T ss_pred HHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHH-cCCeEEEEcCCHHHHHHHHHcCCCEEec
Confidence 99999999999999999853 6789999999999889999999999998 5999988888999999999999999998
Q ss_pred CCCCc----------------------cc----cC--CCCccEEEecCc--cHHHHHHhcccCCeEEEEcCCCCC-CceE
Q 016265 285 YTKDN----------------------FE----DL--PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP-PGFR 333 (392)
Q Consensus 285 ~~~~~----------------------~~----~~--~~~~D~vid~~G--~~~~~~~~l~~~G~iv~~g~~~~~-~~~~ 333 (392)
+++.+ +. +. .+++|++|||+| .+..++++++++|+++.+|..... ..+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 320 (398)
T TIGR01751 241 RNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYD 320 (398)
T ss_pred CCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcC
Confidence 75431 00 01 247999999998 467899999999999999865311 1110
Q ss_pred ----------E--EEeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 016265 334 ----------F--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 334 ----------~--~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
. ......+.+++++++++++++.+. +++.|++++++++|+.+.+++..||+|++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 321 NRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 0 011122447889999999998865 5688999999999999999998999999875
No 50
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.8e-37 Score=292.47 Aligned_cols=296 Identities=40% Similarity=0.579 Sum_probs=234.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCC--CCCCCcCCCceeEE---EEEeC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATD--SPLPTVPGYDVAGV---VVKVG 158 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~--~~~p~v~G~e~~G~---V~~vG 158 (392)
++.+.+..+.......+.++.++|.|.+++++|++.++++|+.|+.+..|.+.... ..+|.+.+.++.|+ +...|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g 84 (347)
T KOG1198|consen 5 IRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVG 84 (347)
T ss_pred cceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccc
Confidence 34444433333322344448999999999999999999999999999999875432 25675555555444 44445
Q ss_pred -CCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-c------CC
Q 016265 159 -TQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-T------GF 230 (392)
Q Consensus 159 -~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~------~~ 230 (392)
..+..+..||++.... ..|+|+||.++|...++++|++++++++|++|++..|||.++.. . +.
T Consensus 85 ~~~~~~~~~g~~~~~~~---------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~ 155 (347)
T KOG1198|consen 85 DDVVGGWVHGDAVVAFL---------SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKL 155 (347)
T ss_pred cccccceEeeeEEeecc---------CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccccccccc
Confidence 3345566777666654 37999999999999999999999999999999999999999954 5 69
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccC-----CCCccEEEecCc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL-----PEKFDVVYDAIG 305 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~-----~~~~D~vid~~G 305 (392)
++|++|||+||+|++|++++|+|++. ++.++++++++++.++++++|+|+++||+++++.+. ..+||+||||+|
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg 234 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHA-GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVG 234 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhc-CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCC
Confidence 99999999999999999999999994 788899999999999999999999999999877553 447999999998
Q ss_pred c--HHHHHHhcccCCeEEEEcCCC-------CC-------------------CceEEEEeecHHHHHHHHHHHHCCCccc
Q 016265 306 Q--CDRAVKAIKEGGTVVALTGAV-------TP-------------------PGFRFVVTSNGEVLKKLNPYLESGKVKP 357 (392)
Q Consensus 306 ~--~~~~~~~l~~~G~iv~~g~~~-------~~-------------------~~~~~~~~~~~~~~~~~~~~l~~g~l~~ 357 (392)
. ....+.++..+|+...++... .. ....+.+....+.++.+.++++.|++++
T Consensus 235 ~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp 314 (347)
T KOG1198|consen 235 GSTLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKP 314 (347)
T ss_pred CCccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccC
Confidence 4 467778888887644443211 11 0011223456788999999999999988
Q ss_pred ccCCCcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 016265 358 IIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 358 ~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
.+. +.||++++.+|++.+.++...||+++.+.
T Consensus 315 ~i~--~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 315 VID--SVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred Ccc--eeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 754 78999999999999999999999999875
No 51
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=7.7e-36 Score=285.85 Aligned_cols=296 Identities=31% Similarity=0.425 Sum_probs=245.6
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCC-CCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT-DSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||+++++++....+++. +.+.|.+.++||+|++.++++|++|++...|..+.. ...+|.++|||++|+|+++|+++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~ 79 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD 79 (324)
T ss_pred CeEEEEcCCCCccceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence 799999887776667777 777778899999999999999999999988864321 234578899999999999999999
Q ss_pred CCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCC
Q 016265 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGS 242 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~ 242 (392)
.+++||+|++... ...|+|++|+.++...++++|+++++++++.+++++.|||..++..++++|++|+|+|++
T Consensus 80 ~~~~Gd~V~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~ 152 (324)
T cd08244 80 PAWLGRRVVAHTG-------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAA 152 (324)
T ss_pred CCCCCCEEEEccC-------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 9999999998642 125899999999999999999999999999999999999766677889999999999999
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCcc--HHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIGQ--CDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G~--~~~~~~~l 314 (392)
|++|++++++|+. .|++++++++++++.+.++++|+++++++.+.++.+ . .+++|+++||+|. ...+++++
T Consensus 153 ~~~g~~~~~la~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l 231 (324)
T cd08244 153 GGLGSLLVQLAKA-AGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALL 231 (324)
T ss_pred chHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHh
Confidence 9999999999999 599999999899999999999999999877654322 1 2479999999983 57899999
Q ss_pred ccCCeEEEEcCCCCC-----------CceEEE---Ee-----ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHH
Q 016265 315 KEGGTVVALTGAVTP-----------PGFRFV---VT-----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFS 375 (392)
Q Consensus 315 ~~~G~iv~~g~~~~~-----------~~~~~~---~~-----~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~ 375 (392)
+++|+++.+|..... ....+. .. ...+.+++++++++++.+.+. +++.|+++++++|++
T Consensus 232 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~ 309 (324)
T cd08244 232 APGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPV--VGQTFPLERAAEAHA 309 (324)
T ss_pred ccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCc--cceEEeHHHHHHHHH
Confidence 999999999764311 011111 10 113567888999999998754 567899999999999
Q ss_pred HHHhCCCCeeEEEEe
Q 016265 376 YIETNKATGKVVIHP 390 (392)
Q Consensus 376 ~l~~~~~~gKvvl~~ 390 (392)
.+.++...||++++|
T Consensus 310 ~~~~~~~~~kvv~~~ 324 (324)
T cd08244 310 ALEARSTVGKVLLLP 324 (324)
T ss_pred HHHcCCCCceEEEeC
Confidence 999999899999865
No 52
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.9e-36 Score=291.39 Aligned_cols=298 Identities=23% Similarity=0.297 Sum_probs=239.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCC---------CCCCCCCCcCCCceeEEE
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK---------ATDSPLPTVPGYDVAGVV 154 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---------~~~~~~p~v~G~e~~G~V 154 (392)
|||+++..+ .++++ +.+.|+++++||+||+.++++|+.|++.+.|... .....+|.++|||++|+|
T Consensus 1 m~a~~~~~~----~~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 75 (341)
T cd08262 1 MRAAVFRDG----PLVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV 75 (341)
T ss_pred CceEEEeCC----ceEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence 789998755 37888 8999999999999999999999999999887321 012235788999999999
Q ss_pred EEeCCCCCC-CCCCCEEEecccccccCCC--------CCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 155 VKVGTQVKE-FKEGDEVYGDINEKALEGP--------KQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 155 ~~vG~~v~~-~~vGdrV~~~~~~~~~~~~--------~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++|+++++ +++||+|++.....+..+. ...|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus 76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~ 154 (341)
T cd08262 76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV 154 (341)
T ss_pred EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence 999999987 9999999986432111110 136899999999999999999999999877 667888999998
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEE-EeCCcccHHHHHhcCCcEEEeCCCCccc-------c--CCC
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVA-ATSSTRNLEFLKSLGADLAIDYTKDNFE-------D--LPE 295 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~-~~~~~~~~~~~~~~G~~~vi~~~~~~~~-------~--~~~ 295 (392)
..+++++|++|+|+| +|++|.+++|+|+.+ |+++++ ++.++++.++++++|++++++++..+.. . ..+
T Consensus 155 ~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 232 (341)
T cd08262 155 RRARLTPGEVALVIG-CGPIGLAVIAALKAR-GVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGP 232 (341)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCC
Confidence 888999999999997 799999999999995 987554 4568889999999999999987654221 1 135
Q ss_pred CccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCC----------CceE--EEEeecHHHHHHHHHHHHCCCcccccC
Q 016265 296 KFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTP----------PGFR--FVVTSNGEVLKKLNPYLESGKVKPIID 360 (392)
Q Consensus 296 ~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~----------~~~~--~~~~~~~~~~~~~~~~l~~g~l~~~~~ 360 (392)
++|++||++|. +..++++++++|+++.+|..... ..+. .......+.+.++++++++|.+.+...
T Consensus 233 ~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~ 312 (341)
T cd08262 233 KPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAPM 312 (341)
T ss_pred CCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHHh
Confidence 79999999874 47889999999999999754311 1112 222334567889999999999986544
Q ss_pred CCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 361 PKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 361 ~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
+++.|+++++++|++.+.+++..||+|++
T Consensus 313 i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 313 VTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred eEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 56889999999999999999988999874
No 53
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.3e-36 Score=293.37 Aligned_cols=298 Identities=20% Similarity=0.289 Sum_probs=237.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCC-------CCCCCCCcCCCceeEEEEE
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-------TDSPLPTVPGYDVAGVVVK 156 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-------~~~~~p~v~G~e~~G~V~~ 156 (392)
|||+++++++. ++++ +.+.|++.++||+||+.++++|+.|++.+.|.... ....+|.++|||++|+|++
T Consensus 1 mka~~~~~~~~---~~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~ 76 (350)
T cd08256 1 MRAVVCHGPQD---YRLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE 76 (350)
T ss_pred CeeEEEecCCc---eEEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence 79999987765 7888 89999999999999999999999999988886311 0114577899999999999
Q ss_pred eCCCCC--CCCCCCEEEeccccccc------------------CCC--CCCCcceeEEEecCC-ceeeCCCCCCHHhHhc
Q 016265 157 VGTQVK--EFKEGDEVYGDINEKAL------------------EGP--KQFGSLAEYTAVEER-LLAPKPKNLDFVQAAG 213 (392)
Q Consensus 157 vG~~v~--~~~vGdrV~~~~~~~~~------------------~~~--~~~G~~a~~~~v~~~-~~~~iP~~l~~~~aa~ 213 (392)
+|++|+ +|++||+|++.....+. .|. ...|+|++|+.++++ .++++|+++++++++.
T Consensus 77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~ 156 (350)
T cd08256 77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL 156 (350)
T ss_pred eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence 999999 99999999873211000 001 136899999999988 5789999999999998
Q ss_pred cchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEE-EEeCCcccHHHHHhcCCcEEEeCCCCcccc
Q 016265 214 LPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRV-AATSSTRNLEFLKSLGADLAIDYTKDNFED 292 (392)
Q Consensus 214 l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv-~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~ 292 (392)
+ .++.|+|++++.+++++|++|+|. |+|++|++++++|+.+ |++++ +++++++|.++++++|+++++++...++.+
T Consensus 157 ~-~~~~ta~~a~~~~~~~~g~~vlI~-g~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 233 (350)
T cd08256 157 I-EPLACALHAVDRANIKFDDVVVLA-GAGPLGLGMIGAARLK-NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVE 233 (350)
T ss_pred h-hHHHHHHHHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHc-CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHH
Confidence 8 888899999988899999999995 5899999999999995 87654 556788889999999999999887654322
Q ss_pred ----C--CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCceEE--E---------E-eecHHHHHHHHHHHH
Q 016265 293 ----L--PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPGFRF--V---------V-TSNGEVLKKLNPYLE 351 (392)
Q Consensus 293 ----~--~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~~~~--~---------~-~~~~~~~~~~~~~l~ 351 (392)
. ..++|++||++|. +..++++++++|+++.+|.......+.+ . . ......+.+++++++
T Consensus 234 ~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 313 (350)
T cd08256 234 KIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIA 313 (350)
T ss_pred HHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHH
Confidence 1 3469999999983 5789999999999999975432211110 0 0 112346788999999
Q ss_pred CCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 352 SGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 352 ~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
+|.+++...+++.|+++++++|++.+++++..+|+++
T Consensus 314 ~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 314 SGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred cCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 9999875335688999999999999999988889874
No 54
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.7e-35 Score=281.32 Aligned_cols=284 Identities=31% Similarity=0.384 Sum_probs=237.0
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||++++.+.+ +..++++ +.+.|.++++||+||+.++++|+.|++...+. ..|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~~ 72 (305)
T cd08270 1 MRALVVDPDA-PLRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGSG 72 (305)
T ss_pred CeEEEEccCC-CceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCCC
Confidence 6899998765 5668888 88999999999999999999999999876522 23578999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSG 243 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G 243 (392)
|++||+|++.. ..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++......+|++|+|+|+.|
T Consensus 73 ~~~Gd~V~~~~---------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~ 143 (305)
T cd08270 73 PAVGARVVGLG---------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASG 143 (305)
T ss_pred CCCCCEEEEec---------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCc
Confidence 99999999864 258999999999999999999999999999999999999999766555799999999889
Q ss_pred cHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc--cHHHHHHhcccCCeEE
Q 016265 244 GVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG--QCDRAVKAIKEGGTVV 321 (392)
Q Consensus 244 ~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G--~~~~~~~~l~~~G~iv 321 (392)
++|++++++|+. .|++++.+++++++++.++++|++.+++... .+ ..+++|+++|++| .+..++++++++|+++
T Consensus 144 ~~g~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~--~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v 219 (305)
T cd08270 144 GVGRFAVQLAAL-AGAHVVAVVGSPARAEGLRELGAAEVVVGGS-EL--SGAPVDLVVDSVGGPQLARALELLAPGGTVV 219 (305)
T ss_pred HHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-cc--cCCCceEEEECCCcHHHHHHHHHhcCCCEEE
Confidence 999999999999 5999999999999999999999877664332 11 1247999999998 4688999999999999
Q ss_pred EEcCCCCC-C------------ceEEEE---e---ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCC
Q 016265 322 ALTGAVTP-P------------GFRFVV---T---SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKA 382 (392)
Q Consensus 322 ~~g~~~~~-~------------~~~~~~---~---~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~ 382 (392)
.+|..... . ...+.. . .....++.++++++++++++. +.+.|+++++++|++.+.++..
T Consensus 220 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~ 297 (305)
T cd08270 220 SVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRF 297 (305)
T ss_pred EEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCC
Confidence 99754310 0 111111 1 113567889999999999865 5678999999999999999988
Q ss_pred CeeEEEEe
Q 016265 383 TGKVVIHP 390 (392)
Q Consensus 383 ~gKvvl~~ 390 (392)
.||+|+.+
T Consensus 298 ~gkvvi~~ 305 (305)
T cd08270 298 RGKAVLDV 305 (305)
T ss_pred CceEEEeC
Confidence 89999864
No 55
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-35 Score=284.97 Aligned_cols=295 Identities=33% Similarity=0.536 Sum_probs=244.5
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
||||+++.+++....+++. +.+.|.+.++||+||+.++++|+.|+....|.++. ....|.++|||++|+|+++|+++.
T Consensus 1 ~m~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~ 78 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP-PPGSSEILGLEVAGYVEDVGSDVK 78 (334)
T ss_pred CcEEEEEEecCCCcceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEeCCCCC
Confidence 6999999988876667787 77888899999999999999999999998886542 233467899999999999999999
Q ss_pred CCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-cCCCCCCeEEEEcC
Q 016265 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKSILVLNG 241 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlI~Ga 241 (392)
++++||+|++... +|+|++|++++.+.++++|+++++++++.+++++.|||+++.. ..+++|++|+|+|+
T Consensus 79 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga 149 (334)
T PTZ00354 79 RFKEGDRVMALLP---------GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAG 149 (334)
T ss_pred CCCCCCEEEEecC---------CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998632 4899999999999999999999999999999999999999854 78999999999999
Q ss_pred CCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCc-ccc----C--CCCccEEEecCc--cHHHHHH
Q 016265 242 SGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDN-FED----L--PEKFDVVYDAIG--QCDRAVK 312 (392)
Q Consensus 242 ~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~-~~~----~--~~~~D~vid~~G--~~~~~~~ 312 (392)
+|++|++++++|+.+ |+++++++++++++++++++|+++++++...+ +.+ . .+++|++||++| .+..+++
T Consensus 150 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 228 (334)
T PTZ00354 150 ASGVGTAAAQLAEKY-GAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAE 228 (334)
T ss_pred CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence 999999999999995 99988888999999999999999999876543 221 1 357999999988 4688999
Q ss_pred hcccCCeEEEEcCCCCC----Cce--------EEEE---e--ec-------HHHHHHHHHHHHCCCcccccCCCcccchh
Q 016265 313 AIKEGGTVVALTGAVTP----PGF--------RFVV---T--SN-------GEVLKKLNPYLESGKVKPIIDPKGPFPFS 368 (392)
Q Consensus 313 ~l~~~G~iv~~g~~~~~----~~~--------~~~~---~--~~-------~~~~~~~~~~l~~g~l~~~~~~t~~~~l~ 368 (392)
+++++|+++.++..... ..+ .+.. . .. ...+++++++++++.+.+. +.+.|+++
T Consensus 229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~ 306 (334)
T PTZ00354 229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLE 306 (334)
T ss_pred HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHH
Confidence 99999999998753211 110 1110 0 00 1335778889999998764 56789999
Q ss_pred hHHHHHHHHHhCCCCeeEEEEeC
Q 016265 369 QVVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 369 ~~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
+++++++.+.+++..||+|+.+.
T Consensus 307 ~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 307 EVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred HHHHHHHHHHhCCCCceEEEecC
Confidence 99999999998888899998653
No 56
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=8.2e-36 Score=288.03 Aligned_cols=295 Identities=26% Similarity=0.358 Sum_probs=243.6
Q ss_pred eEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
|+|+.++.+. .++++ +.+.|++.+|||+||+.++++|++|++.+.|.+. ...+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~--~~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~V~~vG~~v~~~ 75 (337)
T cd05283 1 KGYAARDASG--KLEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG--PTKYPLVPGHEIVGIVVAVGSKVTKF 75 (337)
T ss_pred CceEEecCCC--CceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCcC--CCCCCcccCcceeeEEEEECCCCccc
Confidence 5677777764 48888 8999999999999999999999999999988763 23468899999999999999999999
Q ss_pred CCCCEEEecc-c----c--ccc-------------------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhH
Q 016265 165 KEGDEVYGDI-N----E--KAL-------------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAI 218 (392)
Q Consensus 165 ~vGdrV~~~~-~----~--~~~-------------------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~ 218 (392)
++||+|+..+ . . .+. .+....|+|++|+.++.+.++++|+++++++++.+++.+
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~ 155 (337)
T cd05283 76 KVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAG 155 (337)
T ss_pred CCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHH
Confidence 9999997321 0 0 000 012336899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcc-ccCCCCc
Q 016265 219 ETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNF-EDLPEKF 297 (392)
Q Consensus 219 ~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~-~~~~~~~ 297 (392)
.|||++++...+++|++|+|.| .|++|++++++|+. .|+++++++++++++++++++|++.+++....++ ....+++
T Consensus 156 ~ta~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~-~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~ 233 (337)
T cd05283 156 ITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKA-LGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSL 233 (337)
T ss_pred HHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHH-cCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCc
Confidence 9999999888899999999976 89999999999999 5999989989989999999999999998765443 2335689
Q ss_pred cEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCc----------eEE--EEeecHHHHHHHHHHHHCCCcccccCCC
Q 016265 298 DVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPG----------FRF--VVTSNGEVLKKLNPYLESGKVKPIIDPK 362 (392)
Q Consensus 298 D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~----------~~~--~~~~~~~~~~~~~~~l~~g~l~~~~~~t 362 (392)
|++|||+|. ...++++++++|+++.+|....... ..+ ........++++++++++|++++. .
T Consensus 234 d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---~ 310 (337)
T cd05283 234 DLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPW---V 310 (337)
T ss_pred eEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccc---e
Confidence 999999982 6889999999999999986532211 111 112345778999999999998764 3
Q ss_pred cccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 363 GPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 363 ~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
+.|+++++++||+.+.+++..||+|++
T Consensus 311 ~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 311 EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 689999999999999999999999874
No 57
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=9.4e-36 Score=287.75 Aligned_cols=295 Identities=28% Similarity=0.376 Sum_probs=240.8
Q ss_pred eeEEEEcccCCc-ceEEEeccccCCCCCC-CeEEEEEeEEecChHhHHhhcCCCCCCCC---CCCCcCCCceeEEEEEeC
Q 016265 84 MKAWLYGEYGGV-DVLKFDEKVTVPQVKE-DQVLIKVVAAALNPVDGKRRQGKFKATDS---PLPTVPGYDVAGVVVKVG 158 (392)
Q Consensus 84 mka~v~~~~~~~-~~l~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~~~---~~p~v~G~e~~G~V~~vG 158 (392)
|||+++.+.+.+ +.++++ +.+.|.|.+ +||+||+.++|+|++|++.+.|.++.... .+|.++|||++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG 79 (341)
T ss_pred CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence 799999988765 357888 889998888 99999999999999999998887642211 157789999999999999
Q ss_pred CCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-cCCCCCCeEE
Q 016265 159 TQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKSIL 237 (392)
Q Consensus 159 ~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~g~~Vl 237 (392)
+++..|++||+|++... ..|+|++|+.++.+.++++|+++++++++.+++++.|||+++.. ..+++|++||
T Consensus 80 ~~v~~~~~Gd~V~~~~~--------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 151 (341)
T cd08290 80 SGVKSLKPGDWVIPLRP--------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI 151 (341)
T ss_pred CCCCCCCCCCEEEecCC--------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence 99999999999998642 25899999999999999999999999999999999999999954 6789999999
Q ss_pred EEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc----ccHHHHHhcCCcEEEeCCCC---cccc----C-CCCccEEEecCc
Q 016265 238 VLNGSGGVGSLVIQLAKQVFGASRVAATSST----RNLEFLKSLGADLAIDYTKD---NFED----L-PEKFDVVYDAIG 305 (392)
Q Consensus 238 I~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~----~~~~~~~~~G~~~vi~~~~~---~~~~----~-~~~~D~vid~~G 305 (392)
|+|++|++|++++|+|++ .|++++++++++ ++++.++++|+++++++.+. .+.+ . .+++|++|||+|
T Consensus 152 I~g~~g~vg~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g 230 (341)
T cd08290 152 QNGANSAVGQAVIQLAKL-LGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG 230 (341)
T ss_pred EccchhHHHHHHHHHHHH-cCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence 999899999999999999 599998888765 66888899999999988764 3321 1 227999999998
Q ss_pred c--HHHHHHhcccCCeEEEEcCCCC-C----------CceEEEEe--------ecH----HHHHHHHHHHHCCCcccccC
Q 016265 306 Q--CDRAVKAIKEGGTVVALTGAVT-P----------PGFRFVVT--------SNG----EVLKKLNPYLESGKVKPIID 360 (392)
Q Consensus 306 ~--~~~~~~~l~~~G~iv~~g~~~~-~----------~~~~~~~~--------~~~----~~~~~~~~~l~~g~l~~~~~ 360 (392)
. ...++++++++|+++.++.... + ....+... ..+ ..+.++++++.+|.+++..
T Consensus 231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 309 (341)
T cd08290 231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPP- 309 (341)
T ss_pred cHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCc-
Confidence 3 5678999999999999975321 1 11111111 111 2477888999999988652
Q ss_pred CCccc---chhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 361 PKGPF---PFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 361 ~t~~~---~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
...+ +++++++|++.+.++...||+|+++
T Consensus 310 -~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 310 -VEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred -ccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 3455 9999999999999988889999874
No 58
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.7e-36 Score=290.42 Aligned_cols=299 Identities=27% Similarity=0.387 Sum_probs=243.0
Q ss_pred eeEEEEcccCCcceEEEeccccCCCC-CCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
||++++.+++. +++. +.+.|.| .++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 ~ka~~~~~~~~---~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v~ 74 (347)
T cd05278 1 MKALVYLGPGK---IGLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG--AKHGMILGHEFVGEVVEVGSDVK 74 (347)
T ss_pred CceEEEecCCc---eEEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC--CCCCceeccceEEEEEEECCCcc
Confidence 68999987665 6777 8899999 9999999999999999999999887753 45688999999999999999999
Q ss_pred CCCCCCEEEecccccc---------------------cCCCCCCCcceeEEEecCC--ceeeCCCCCCHHhHhccchhHH
Q 016265 163 EFKEGDEVYGDINEKA---------------------LEGPKQFGSLAEYTAVEER--LLAPKPKNLDFVQAAGLPLAIE 219 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~---------------------~~~~~~~G~~a~~~~v~~~--~~~~iP~~l~~~~aa~l~~~~~ 219 (392)
++++||+|++.....+ ..+....|+|++|++++.+ .++++|+++++++++.+++++.
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ 154 (347)
T cd05278 75 RLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILP 154 (347)
T ss_pred ccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhh
Confidence 9999999997421110 0111236899999999987 8999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C-
Q 016265 220 TAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L- 293 (392)
Q Consensus 220 ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~- 293 (392)
|||+++...++++|++|+|.| +|++|++++|+|+.+ |. .++++.+++++.++++++|++.++++++.++.+ .
T Consensus 155 ta~~~~~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~ 232 (347)
T cd05278 155 TGFHGAELAGIKPGSTVAVIG-AGPVGLCAVAGARLL-GAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELT 232 (347)
T ss_pred heeehhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHc
Confidence 999999778899999999976 799999999999984 86 677777788889999999999999887655432 1
Q ss_pred -CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCC-----------ceEEEE--eecHHHHHHHHHHHHCCCcc
Q 016265 294 -PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP-----------GFRFVV--TSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 294 -~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~-----------~~~~~~--~~~~~~~~~~~~~l~~g~l~ 356 (392)
.+++|++||++|. +..++++++++|+++.+|...... ...+.. ......++++++++.+|.++
T Consensus 233 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (347)
T cd05278 233 GGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKID 312 (347)
T ss_pred CCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCC
Confidence 2579999999873 588899999999999987443111 111111 11246788999999999998
Q ss_pred cccCCCcccchhhHHHHHHHHHhCCC-CeeEEEEe
Q 016265 357 PIIDPKGPFPFSQVVEAFSYIETNKA-TGKVVIHP 390 (392)
Q Consensus 357 ~~~~~t~~~~l~~~~~A~~~l~~~~~-~gKvvl~~ 390 (392)
+.......|+++++++|++.+..++. .+|+|+++
T Consensus 313 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 313 PSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred hhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 65334567999999999999988877 68998864
No 59
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.3e-35 Score=286.33 Aligned_cols=297 Identities=26% Similarity=0.340 Sum_probs=239.8
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++++++.... ++ +.+.|.++++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|+++++
T Consensus 1 mka~~~~~~~~~~~--~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~ 74 (338)
T PRK09422 1 MKAAVVNKDHTGDV--VV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVTS 74 (338)
T ss_pred CeEEEecCCCCCce--EE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCcc
Confidence 79999998776432 56 78999999999999999999999999998887532 23678999999999999999999
Q ss_pred CCCCCEEEecccc-------cc------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 164 FKEGDEVYGDINE-------KA------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 164 ~~vGdrV~~~~~~-------~~------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
|++||+|++.+.- .. ..+...+|+|++|+.++...++++|+++++++++.+++++.|||++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~ 154 (338)
T PRK09422 75 LKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKA 154 (338)
T ss_pred CCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHH
Confidence 9999999862110 00 0112236999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCC-Cccc----cCCCCccE
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTK-DNFE----DLPEKFDV 299 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~-~~~~----~~~~~~D~ 299 (392)
++.+++++|++|||+| +|++|++++|+|+.+.|++++++++++++++.++++|++.++++.. .++. +...++|.
T Consensus 155 ~~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~ 233 (338)
T PRK09422 155 IKVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHA 233 (338)
T ss_pred HHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCcE
Confidence 9888999999999999 7999999999999734999999999999999999999999998754 3321 22347885
Q ss_pred EEec-Cc--cHHHHHHhcccCCeEEEEcCCCCCCc----------eEEEE--eecHHHHHHHHHHHHCCCcccccCCCcc
Q 016265 300 VYDA-IG--QCDRAVKAIKEGGTVVALTGAVTPPG----------FRFVV--TSNGEVLKKLNPYLESGKVKPIIDPKGP 364 (392)
Q Consensus 300 vid~-~G--~~~~~~~~l~~~G~iv~~g~~~~~~~----------~~~~~--~~~~~~~~~~~~~l~~g~l~~~~~~t~~ 364 (392)
++++ .+ .++.++++++++|+++.+|....... ..+.. ....+.++++++++++|.+.+. .+.
T Consensus 234 vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~---v~~ 310 (338)
T PRK09422 234 AVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPK---VQL 310 (338)
T ss_pred EEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCcc---EEE
Confidence 5544 43 46899999999999999975432111 11111 1135678899999999998654 245
Q ss_pred cchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 365 FPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 365 ~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
++++++++||+.+.++...||+++.+
T Consensus 311 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 311 RPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred EcHHHHHHHHHHHHcCCccceEEEec
Confidence 89999999999999999889999864
No 60
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=9e-36 Score=290.89 Aligned_cols=297 Identities=27% Similarity=0.344 Sum_probs=238.6
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
+|||+++.+++.. ++++ +.+.|.++++||+||+.++++|++|++...|.++ ..+|.++|||++|+|+++|+++.
T Consensus 2 ~~~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~ 75 (365)
T cd08278 2 KTTAAVVREPGGP--FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP---TPLPAVLGHEGAGVVEAVGSAVT 75 (365)
T ss_pred ccEEeeeccCCCc--ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC---CCCCcccccceeEEEEEeCCCcc
Confidence 6899999986654 6777 8899999999999999999999999999988764 34678999999999999999999
Q ss_pred CCCCCCEEEeccccc-----cc---------------CC--------------------CCCCCcceeEEEecCCceeeC
Q 016265 163 EFKEGDEVYGDINEK-----AL---------------EG--------------------PKQFGSLAEYTAVEERLLAPK 202 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~-----~~---------------~~--------------------~~~~G~~a~~~~v~~~~~~~i 202 (392)
++++||+|++....+ +. .+ ....|+|++|+.++++.++++
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i 155 (365)
T cd08278 76 GLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV 155 (365)
T ss_pred cCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence 999999998632100 00 00 012489999999999999999
Q ss_pred CCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCc
Q 016265 203 PKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGAD 280 (392)
Q Consensus 203 P~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~ 280 (392)
|+++++++++.+++++.||++++ +...+++|++|+|+| +|++|++++|+|+.+ |++ +++++.+++|++.++++|++
T Consensus 156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~-G~~~v~~~~~~~~k~~~~~~~g~~ 233 (365)
T cd08278 156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIA-GCTTIIAVDIVDSRLELAKELGAT 233 (365)
T ss_pred CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCc
Confidence 99999999999999999999987 467889999999996 799999999999995 995 66677888999999999999
Q ss_pred EEEeCCCCcccc-----CCCCccEEEecCc---cHHHHHHhcccCCeEEEEcCCCC--C----------CceEEEE----
Q 016265 281 LAIDYTKDNFED-----LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT--P----------PGFRFVV---- 336 (392)
Q Consensus 281 ~vi~~~~~~~~~-----~~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~--~----------~~~~~~~---- 336 (392)
.++++.+.++.+ ..+++|+++||+| .+..++++++++|+++.+|.... . ....+..
T Consensus 234 ~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (365)
T cd08278 234 HVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEG 313 (365)
T ss_pred EEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecC
Confidence 999987654322 1457999999997 35899999999999999986521 1 1111111
Q ss_pred -eecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 337 -TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 337 -~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
....+.++++++++++|++++.. +...|+++++++|++.+++++.. |++++
T Consensus 314 ~~~~~~~~~~~~~~l~~g~l~~~~-~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 314 DSVPQEFIPRLIELYRQGKFPFDK-LVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred CcChHHHHHHHHHHHHcCCCChHH-heEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 01145678899999999986432 23579999999999999887764 88774
No 61
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.9e-35 Score=285.77 Aligned_cols=300 Identities=30% Similarity=0.417 Sum_probs=246.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++ ...++++ +.+.|.+.++||+||+.++++|++|++.+.|.++.. ...|.++|||++|+|+++|++++.
T Consensus 1 m~a~~~~~~~-~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~vG~~~~~ 77 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK-PKLPLIGGHEGAGVVVAVGPGVSG 77 (341)
T ss_pred CceEEeeccC-CCCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC-CCCCccCCcccceEEEEeCCCCCC
Confidence 7999998877 3347888 889999999999999999999999999988876422 345678999999999999999999
Q ss_pred CCCCCEEEeccc-----c--cc------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 164 FKEGDEVYGDIN-----E--KA------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 164 ~~vGdrV~~~~~-----~--~~------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
+++||+|++... . .. ..+....|+|++|+.++.+.++++|+++++++++.++..+.|||++
T Consensus 78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~ 157 (341)
T cd08297 78 LKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA 157 (341)
T ss_pred CCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHH
Confidence 999999987420 0 00 0011236899999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCcc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFD 298 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D 298 (392)
+...++++|++|||+|+++++|++++++|++ .|+++++++.++++.+.++++|+++++++...++.+ . .+++|
T Consensus 158 ~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd 236 (341)
T cd08297 158 LKKAGLKPGDWVVISGAGGGLGHLGVQYAKA-MGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAH 236 (341)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCC
Confidence 9877899999999999888899999999999 499999999999999999999999999887654322 1 35799
Q ss_pred EEEecCc---cHHHHHHhcccCCeEEEEcCCCCCC-c----------eEEEEe--ecHHHHHHHHHHHHCCCcccccCCC
Q 016265 299 VVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP-G----------FRFVVT--SNGEVLKKLNPYLESGKVKPIIDPK 362 (392)
Q Consensus 299 ~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~~-~----------~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~t 362 (392)
++||+.+ ....++++++++|+++.+|...... . ..+... ...+.+++++++++++++++. .
T Consensus 237 ~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~ 313 (341)
T cd08297 237 AVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPH---I 313 (341)
T ss_pred EEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcce---e
Confidence 9999765 3578999999999999998543211 1 111111 125788999999999998753 2
Q ss_pred cccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 363 GPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 363 ~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+.|++++++++|+.+..+...||+++++
T Consensus 314 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 314 QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 5799999999999999998889999874
No 62
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.3e-35 Score=283.57 Aligned_cols=291 Identities=28% Similarity=0.398 Sum_probs=242.9
Q ss_pred eeEEEEcccCC--cceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCC
Q 016265 84 MKAWLYGEYGG--VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (392)
Q Consensus 84 mka~v~~~~~~--~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v 161 (392)
||||++.+++. .+.++++ +.+.|.+.++||+||+.++|+|+.|++...|.++.. ..+|.++|||++|+|+.+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~p~~~g~e~~G~v~~vG~~v 79 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-VKPPFDCGFEGVGEVVAVGEGV 79 (329)
T ss_pred ceEEEeccCCCCcccCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC-CCCCcccCceeEEEEEEECCCC
Confidence 89999999887 6778888 899999999999999999999999999988876422 3468899999999999999999
Q ss_pred CCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEc
Q 016265 162 KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLN 240 (392)
Q Consensus 162 ~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~G 240 (392)
.++++||+|++.. .|+|++|+.++.+.++++|++ +.+++.+++++.|||+++. ..++++|++|+|+|
T Consensus 80 ~~~~~Gd~V~~~~----------~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g 147 (329)
T cd08250 80 TDFKVGDAVATMS----------FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTA 147 (329)
T ss_pred CCCCCCCEEEEec----------CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEe
Confidence 9999999999864 489999999999999999997 3467778899999999985 46889999999999
Q ss_pred CCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc-----CCCCccEEEecCc--cHHHHHHh
Q 016265 241 GSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAIG--QCDRAVKA 313 (392)
Q Consensus 241 a~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~-----~~~~~D~vid~~G--~~~~~~~~ 313 (392)
++|++|++++|+|+. .|++++++++++++.+.++++|++.+++..+..+.+ ..+++|++||++| ....++++
T Consensus 148 a~g~ig~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~ 226 (329)
T cd08250 148 AAGGTGQFAVQLAKL-AGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDN 226 (329)
T ss_pred CccHHHHHHHHHHHH-cCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHH
Confidence 999999999999999 599999999998999999999999998876654321 2357999999998 45789999
Q ss_pred cccCCeEEEEcCCCCC--------------------CceEEEEee-------cHHHHHHHHHHHHCCCcccccCCCcccc
Q 016265 314 IKEGGTVVALTGAVTP--------------------PGFRFVVTS-------NGEVLKKLNPYLESGKVKPIIDPKGPFP 366 (392)
Q Consensus 314 l~~~G~iv~~g~~~~~--------------------~~~~~~~~~-------~~~~~~~~~~~l~~g~l~~~~~~t~~~~ 366 (392)
++++|+++.+|..... ....+.... ..+.+.++++++.++.+++....++.|+
T Consensus 227 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 306 (329)
T cd08250 227 LALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRG 306 (329)
T ss_pred hccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccC
Confidence 9999999998754310 011111111 1345788889999999887555566799
Q ss_pred hhhHHHHHHHHHhCCCCeeEEEE
Q 016265 367 FSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 367 l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
++++++|++.+.+++..||++++
T Consensus 307 ~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 307 LESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHHcCCCCceEEeC
Confidence 99999999999998888898874
No 63
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.3e-35 Score=287.45 Aligned_cols=299 Identities=22% Similarity=0.303 Sum_probs=240.3
Q ss_pred eeEEEEcccCCcceEEEeccccCCCC-CCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||+++.+++. ++++ +.+.|+| .++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~---~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~v~ 74 (345)
T cd08286 1 MKALVYHGPGK---ISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT--VTPGRILGHEGVGVVEEVGSAVT 74 (345)
T ss_pred CceEEEecCCc---eeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC--CCCCceecccceEEEEEeccCcc
Confidence 78999987765 7887 8899986 8999999999999999999999987643 33578999999999999999999
Q ss_pred CCCCCCEEEecccccc-------------------cCCCCCCCcceeEEEecCC--ceeeCCCCCCHHhHhccchhHHHH
Q 016265 163 EFKEGDEVYGDINEKA-------------------LEGPKQFGSLAEYTAVEER--LLAPKPKNLDFVQAAGLPLAIETA 221 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~-------------------~~~~~~~G~~a~~~~v~~~--~~~~iP~~l~~~~aa~l~~~~~ta 221 (392)
++++||+|++.....+ ..+...+|+|++|+.++.+ .++++|++++..+++.++++++||
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta 154 (345)
T cd08286 75 NFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTG 154 (345)
T ss_pred ccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHH
Confidence 9999999987532100 0111235899999999987 899999999999999999999999
Q ss_pred HHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--
Q 016265 222 YEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L-- 293 (392)
Q Consensus 222 ~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~-- 293 (392)
|+++ ...++.+|++|+|.| +|++|++++|+|+.+ | .++++++.+++|.+.++++|++.++++.+.++.+ .
T Consensus 155 ~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~ 232 (345)
T cd08286 155 YECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLY-SPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTD 232 (345)
T ss_pred HHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhC
Confidence 9976 567889999999987 799999999999995 8 6777777788889999999999999987654322 1
Q ss_pred CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCC----------ceEEEEe-ecHHHHHHHHHHHHCCCccccc
Q 016265 294 PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP----------GFRFVVT-SNGEVLKKLNPYLESGKVKPII 359 (392)
Q Consensus 294 ~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~----------~~~~~~~-~~~~~~~~~~~~l~~g~l~~~~ 359 (392)
..++|++|||+|. ++.++++++++|+++.+|...... ...+... .....+++++++++++.+++..
T Consensus 233 ~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (345)
T cd08286 233 GRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSK 312 (345)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHH
Confidence 2479999999883 578889999999999998543211 1111111 1235678899999999988654
Q ss_pred CCCcccchhhHHHHHHHHHhCCC--CeeEEEEe
Q 016265 360 DPKGPFPFSQVVEAFSYIETNKA--TGKVVIHP 390 (392)
Q Consensus 360 ~~t~~~~l~~~~~A~~~l~~~~~--~gKvvl~~ 390 (392)
..++.|+++++++|++.+.+... ..|++|+|
T Consensus 313 ~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 313 LVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred cEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 45688999999999999987643 35999875
No 64
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.1e-35 Score=286.59 Aligned_cols=300 Identities=27% Similarity=0.363 Sum_probs=241.8
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCC----------CCCCCCCcCCCceeEE
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA----------TDSPLPTVPGYDVAGV 153 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----------~~~~~p~v~G~e~~G~ 153 (392)
|||+++..++.. ++++ +.+.|+++++||+||+.++++|++|++.+.|.++. ....+|.++|||++|+
T Consensus 1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 77 (350)
T cd08240 1 MKAAAVVEPGKP--LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE 77 (350)
T ss_pred CeeEEeccCCCC--ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence 799999877654 6777 89999999999999999999999999998886531 0234567899999999
Q ss_pred EEEeCCCCCCCCCCCEEEecccccc------c------------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccc
Q 016265 154 VVKVGTQVKEFKEGDEVYGDINEKA------L------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLP 215 (392)
Q Consensus 154 V~~vG~~v~~~~vGdrV~~~~~~~~------~------------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~ 215 (392)
|+++|++++++++||+|++...... . .+....|+|++|+.++.+.++++|+++++.+++.++
T Consensus 78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~ 157 (350)
T cd08240 78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA 157 (350)
T ss_pred EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence 9999999999999999988631100 0 001136899999999999999999999999999999
Q ss_pred hhHHHHHHHHHhc-CCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc-
Q 016265 216 LAIETAYEGLERT-GFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNFED- 292 (392)
Q Consensus 216 ~~~~ta~~al~~~-~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~- 292 (392)
+.+.|||+++... ..++|++|+|+| +|++|++++|+||.+ |+ ++++++.+++|++.++++|++.+++.++..+.+
T Consensus 158 ~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 235 (350)
T cd08240 158 CSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKAL-GPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKR 235 (350)
T ss_pred chhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHH
Confidence 9999999999654 455899999996 899999999999995 99 577777889999999999999988876644321
Q ss_pred ----CCCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCC----------ceEEE--EeecHHHHHHHHHHHHCC
Q 016265 293 ----LPEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPP----------GFRFV--VTSNGEVLKKLNPYLESG 353 (392)
Q Consensus 293 ----~~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~----------~~~~~--~~~~~~~~~~~~~~l~~g 353 (392)
..+++|++||++|. ++.++++|+++|+++.++...... .+.+. .....+.+.+++++++++
T Consensus 236 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~ 315 (350)
T cd08240 236 IIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAG 315 (350)
T ss_pred HHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcC
Confidence 12379999999973 689999999999999987543211 11111 112346788999999999
Q ss_pred CcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 354 KVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 354 ~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
.+++. +...|+++++++||+.+.+++..||+++++
T Consensus 316 ~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 316 KLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred CCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 98865 346899999999999999998889999864
No 65
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.9e-35 Score=283.12 Aligned_cols=288 Identities=25% Similarity=0.339 Sum_probs=230.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++. ++++ +.+.|+++++||+||+.++++|++|++...|.++ +|.++|||++|+|+++|++
T Consensus 1 ~~a~~~~~~~~---~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~--- 68 (319)
T cd08242 1 MKALVLDGGLD---LRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA--- 68 (319)
T ss_pred CeeEEEeCCCc---EEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC---
Confidence 68999987553 8888 8999999999999999999999999999888653 5778999999999999987
Q ss_pred CCCCCEEEecccc------------------cccCCC-CCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 164 FKEGDEVYGDINE------------------KALEGP-KQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 164 ~~vGdrV~~~~~~------------------~~~~~~-~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
+++||||...... ....+. ...|+|++|+.++.+.++++|+++++++++.+ ..+.++|.+
T Consensus 69 ~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~ 147 (319)
T cd08242 69 ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI 147 (319)
T ss_pred CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH
Confidence 6799999753211 001111 23689999999999999999999999988864 444567777
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecC
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
++..++++|++|+|+| +|++|++++|+|+.+ |+++++++.++++++.++++|++.++++.+. ...+++|++|||+
T Consensus 148 ~~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~~ 222 (319)
T cd08242 148 LEQVPITPGDKVAVLG-DGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEAT 222 (319)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEECC
Confidence 7888899999999997 899999999999995 9998888889999999999999988887543 2335799999999
Q ss_pred cc---HHHHHHhcccCCeEEEEcCCCCCCceEE---------EEeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHH
Q 016265 305 GQ---CDRAVKAIKEGGTVVALTGAVTPPGFRF---------VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVE 372 (392)
Q Consensus 305 G~---~~~~~~~l~~~G~iv~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~ 372 (392)
|. ++.++++++++|+++..+.......+.+ ........+++++++++++++++...+++.|+++++++
T Consensus 223 g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 302 (319)
T cd08242 223 GSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEALE 302 (319)
T ss_pred CChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHHHH
Confidence 73 5788999999999998764332111110 11111123788999999999965434678999999999
Q ss_pred HHHHHHhCCCCeeEEEEe
Q 016265 373 AFSYIETNKATGKVVIHP 390 (392)
Q Consensus 373 A~~~l~~~~~~gKvvl~~ 390 (392)
||+.+.++. .+|+|++|
T Consensus 303 a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 303 AFERAAEPG-ALKVLLRP 319 (319)
T ss_pred HHHHHhcCC-ceEEEeCC
Confidence 999998766 48999875
No 66
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=5.8e-35 Score=281.41 Aligned_cols=299 Identities=32% Similarity=0.457 Sum_probs=246.4
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||++++..++.+. +.+. +.+.|.+++++|+|++.++++|+.|++...|.++ ....+|.++|+|++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~~ 77 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP-TLTKLPLTLGHEIAGTVVEVGAGVTN 77 (338)
T ss_pred CeeEEEecCCCCc-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc-ccCCCCEeccccccEEEEEECCCCcc
Confidence 7999999888765 6777 7889999999999999999999999999988765 22345778999999999999999999
Q ss_pred CCCCCEEEecccc------------------cccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINE------------------KALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~------------------~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++||+|++.... ....|....|+|++|+.++.+.++++|+++++++++.++.++.|||+++
T Consensus 78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l 157 (338)
T cd08254 78 FKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV 157 (338)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 9999999872110 0011223358999999999999999999999999999999999999998
Q ss_pred H-hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc-----CCCCccE
Q 016265 226 E-RTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDV 299 (392)
Q Consensus 226 ~-~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~-----~~~~~D~ 299 (392)
. ...++++++|||.| +|++|++++++|+. .|+++++++.++++.+.++++|++++++..+....+ ..+++|+
T Consensus 158 ~~~~~~~~~~~vli~g-~g~vG~~~~~la~~-~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~ 235 (338)
T cd08254 158 VRAGEVKPGETVLVIG-LGGLGLNAVQIAKA-MGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDV 235 (338)
T ss_pred HhccCCCCCCEEEEEC-CcHHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceE
Confidence 5 45689999999975 89999999999999 499999899999999999999999988876544322 2457999
Q ss_pred EEecCc---cHHHHHHhcccCCeEEEEcCCCCCCceE------------EEEeecHHHHHHHHHHHHCCCcccccCCCcc
Q 016265 300 VYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGFR------------FVVTSNGEVLKKLNPYLESGKVKPIIDPKGP 364 (392)
Q Consensus 300 vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~ 364 (392)
++||+| .++.++++++++|+++.++.......+. .........+++++++++++.+++. .+.
T Consensus 236 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~ 312 (338)
T cd08254 236 IFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ---VET 312 (338)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc---cee
Confidence 999997 3688999999999999997543211111 0111236778899999999999865 468
Q ss_pred cchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 365 FPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 365 ~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
|++++++++++.+.+++..||+|++|
T Consensus 313 ~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 313 RPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred EcHHHHHHHHHHHHcCCccceEEEeC
Confidence 99999999999999999999999875
No 67
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-35 Score=285.22 Aligned_cols=297 Identities=27% Similarity=0.420 Sum_probs=244.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||++++++++. ++++ +.+.|.+++|||+||+.++++|++|++...|.++. .++|.++|||++|+|+++|+++..
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~g~~~~~ 75 (334)
T PRK13771 1 MKAVILPGFKQG--YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR--MKYPVILGHEVVGTVEEVGENVKG 75 (334)
T ss_pred CeeEEEcCCCCC--cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC--CCCCeeccccceEEEEEeCCCCcc
Confidence 789999988864 7777 88999999999999999999999999988887642 345788999999999999999989
Q ss_pred CCCCCEEEecccccc------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++||+|++.....+ ..+....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++
T Consensus 76 ~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~ 155 (334)
T PRK13771 76 FKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL 155 (334)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHH
Confidence 999999998631100 01112368999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCC--ccccCCCCccEEEec
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKD--NFEDLPEKFDVVYDA 303 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~--~~~~~~~~~D~vid~ 303 (392)
....+++|++|+|+|++|.+|++++|+|+.+ |++++++++++++++.++++ +++++++.+. .+.+. .++|++|||
T Consensus 156 ~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~-~~~d~~ld~ 232 (334)
T PRK13771 156 RRAGVKKGETVLVTGAGGGVGIHAIQVAKAL-GAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKI-GGADIVIET 232 (334)
T ss_pred HhcCCCCCCEEEEECCCccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHhc-CCCcEEEEc
Confidence 7778999999999998899999999999995 99999999999999999888 7777776511 11223 379999999
Q ss_pred Cc--cHHHHHHhcccCCeEEEEcCCCCC----C--------ceEEE--EeecHHHHHHHHHHHHCCCcccccCCCcccch
Q 016265 304 IG--QCDRAVKAIKEGGTVVALTGAVTP----P--------GFRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPF 367 (392)
Q Consensus 304 ~G--~~~~~~~~l~~~G~iv~~g~~~~~----~--------~~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l 367 (392)
+| ....++++++++|+++.+|..... . ...+. .....+.++++++++++|.+++. +++.|++
T Consensus 233 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~ 310 (334)
T PRK13771 233 VGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPV--IGAEVSL 310 (334)
T ss_pred CChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcce--EeeeEcH
Confidence 98 458899999999999999854311 1 11111 12346778999999999998754 5678999
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEe
Q 016265 368 SQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 368 ~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+++++||+.+.++...||+++.+
T Consensus 311 ~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 311 SEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHcCCCcceEEEec
Confidence 99999999999988889999875
No 68
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2.8e-35 Score=287.67 Aligned_cols=298 Identities=31% Similarity=0.459 Sum_probs=243.4
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||||++.+++.. ++++ +.+.|.++++||+|++.++++|++|++...|.++ ..+|.++|||++|+|+++|+++.+
T Consensus 1 ~~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~---~~~p~~~g~e~~G~v~~vG~~~~~ 74 (367)
T cd08263 1 MKAAVLKGPNPP--LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP---FPPPFVLGHEISGEVVEVGPNVEN 74 (367)
T ss_pred CeeEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC---CCCCcccccccceEEEEeCCCCCC
Confidence 799999887644 6777 7899999999999999999999999999888764 256789999999999999999988
Q ss_pred ---CCCCCEEEecccccc-------------cCC---------------------------CCCCCcceeEEEecCCcee
Q 016265 164 ---FKEGDEVYGDINEKA-------------LEG---------------------------PKQFGSLAEYTAVEERLLA 200 (392)
Q Consensus 164 ---~~vGdrV~~~~~~~~-------------~~~---------------------------~~~~G~~a~~~~v~~~~~~ 200 (392)
+++||+|++.....+ ..+ ....|+|++|+.++.+.++
T Consensus 75 ~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (367)
T cd08263 75 PYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALA 154 (367)
T ss_pred CCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEE
Confidence 999999998421000 000 0135899999999999999
Q ss_pred eCCCCCCHHhHhccchhHHHHHHHHHh-cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcC
Q 016265 201 PKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLG 278 (392)
Q Consensus 201 ~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G 278 (392)
++|+++++.+++.+++++.|||+++.. ..+.+|++|+|+| +|++|++++++|+. .|++ +++++.++++.+.++++|
T Consensus 155 ~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~-~G~~~vi~~~~s~~~~~~~~~~g 232 (367)
T cd08263 155 PLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKA-FGASPIIAVDVRDEKLAKAKELG 232 (367)
T ss_pred ECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999999999854 5678999999995 89999999999999 5998 777778888999999999
Q ss_pred CcEEEeCCCCcccc----C--CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCC--C----------CceEEEE-
Q 016265 279 ADLAIDYTKDNFED----L--PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVT--P----------PGFRFVV- 336 (392)
Q Consensus 279 ~~~vi~~~~~~~~~----~--~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~--~----------~~~~~~~- 336 (392)
++.++++++.++.+ . ..++|++||++|. ...++++++++|+++.++.... . .+..+..
T Consensus 233 ~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T cd08263 233 ATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGS 312 (367)
T ss_pred CceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence 99999987655422 1 3579999999873 4789999999999999975431 1 1111111
Q ss_pred --eecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 337 --TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 337 --~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
....+.+++++++++++.+++...+++.|+++++.+|++.+.+++..||+|+.
T Consensus 313 ~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 313 YGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 11136788999999999998764457889999999999999999888999874
No 69
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.3e-35 Score=288.68 Aligned_cols=299 Identities=22% Similarity=0.295 Sum_probs=235.1
Q ss_pred ceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 83 ~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
+||+.++.+.+.. ++++ +.|.|.+.++||+||+.++|||++|++.+.|.++ ..+|.++|||++|+|+++|++++
T Consensus 7 ~~~a~~~~~~~~~--~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~ 80 (373)
T cd08299 7 KCKAAVLWEPKKP--FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV---TPFPVILGHEAAGIVESVGEGVT 80 (373)
T ss_pred eeEEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC---CCCCccccccceEEEEEeCCCCc
Confidence 4899988776654 6777 8999999999999999999999999999988752 34688999999999999999999
Q ss_pred CCCCCCEEEecccc------cccC----------------------------C-----CCCCCcceeEEEecCCceeeCC
Q 016265 163 EFKEGDEVYGDINE------KALE----------------------------G-----PKQFGSLAEYTAVEERLLAPKP 203 (392)
Q Consensus 163 ~~~vGdrV~~~~~~------~~~~----------------------------~-----~~~~G~~a~~~~v~~~~~~~iP 203 (392)
.+++||+|++.... ++.. | ....|+|+||++++.+.++++|
T Consensus 81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP 160 (373)
T cd08299 81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKID 160 (373)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCC
Confidence 99999999875210 0000 0 0025899999999999999999
Q ss_pred CCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcE
Q 016265 204 KNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADL 281 (392)
Q Consensus 204 ~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~ 281 (392)
+++++++++.+++++.|||+++ ..+++++|++|+|+| +|++|++++++|+.. |+ ++++++++++|++.++++|+++
T Consensus 161 ~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~a~~lGa~~ 238 (373)
T cd08299 161 AAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAA-GASRIIAVDINKDKFAKAKELGATE 238 (373)
T ss_pred CCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCce
Confidence 9999999999999999999986 568899999999996 899999999999995 98 7888889999999999999999
Q ss_pred EEeCCCCc--ccc-----CCCCccEEEecCcc---HHHHHHhc-ccCCeEEEEcCCCCCCce-----------EEE---E
Q 016265 282 AIDYTKDN--FED-----LPEKFDVVYDAIGQ---CDRAVKAI-KEGGTVVALTGAVTPPGF-----------RFV---V 336 (392)
Q Consensus 282 vi~~~~~~--~~~-----~~~~~D~vid~~G~---~~~~~~~l-~~~G~iv~~g~~~~~~~~-----------~~~---~ 336 (392)
+++..+.+ +.+ ..+++|++|||+|. +..++..+ +++|+++.+|.......+ .+. .
T Consensus 239 ~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 318 (373)
T cd08299 239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVF 318 (373)
T ss_pred EecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEe
Confidence 99876432 211 13479999999983 45556654 579999999864321111 111 0
Q ss_pred e--ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 337 T--SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 337 ~--~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
. .....+.++++.+.++.++....+++.|+++|+.+||+.+++++. .|+++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 319 GGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred cCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 0 112456677777777776654446789999999999999987765 4888753
No 70
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.8e-35 Score=284.82 Aligned_cols=296 Identities=27% Similarity=0.380 Sum_probs=239.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCC-CCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||+++..++. ++++ +.++|.|. ++||+|++.++++|+.|++...|.++ ..+|.++|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~---~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v~ 73 (344)
T cd08284 1 MKAVVFKGPGD---VRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP---STPGFVLGHEFVGEVVEVGPEVR 73 (344)
T ss_pred CeeEEEecCCC---ceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCCcccccceEEEEEeeCCCcc
Confidence 68999976543 7888 89999985 99999999999999999999888764 33478899999999999999999
Q ss_pred CCCCCCEEEecccccc------c----------------CCCCCCCcceeEEEecCC--ceeeCCCCCCHHhHhccchhH
Q 016265 163 EFKEGDEVYGDINEKA------L----------------EGPKQFGSLAEYTAVEER--LLAPKPKNLDFVQAAGLPLAI 218 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~------~----------------~~~~~~G~~a~~~~v~~~--~~~~iP~~l~~~~aa~l~~~~ 218 (392)
++++||+|++.....+ . ......|+|++|+.++.+ .++++|+++++++++.+++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~ 153 (344)
T cd08284 74 TLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDIL 153 (344)
T ss_pred ccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCch
Confidence 9999999998531100 0 001125899999999865 999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C
Q 016265 219 ETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L 293 (392)
Q Consensus 219 ~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~ 293 (392)
.|||+++....+.+|++|+|+| +|++|++++|+|+. .|+ ++++++.+++|.++++++|++ +++.+..++.+ .
T Consensus 154 ~ta~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~-~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~ 230 (344)
T cd08284 154 PTGYFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQV-LGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREA 230 (344)
T ss_pred HHHHhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHH-cCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHH
Confidence 9999999878889999999996 89999999999999 596 677777788899999999975 46665544322 1
Q ss_pred --CCCccEEEecCc---cHHHHHHhcccCCeEEEEcCCCCC-----------CceEEE--EeecHHHHHHHHHHHHCCCc
Q 016265 294 --PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP-----------PGFRFV--VTSNGEVLKKLNPYLESGKV 355 (392)
Q Consensus 294 --~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~-----------~~~~~~--~~~~~~~~~~~~~~l~~g~l 355 (392)
.+++|++||++| .+..++++++++|+++.+|..... ....+. .......+++++++++++++
T Consensus 231 ~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 310 (344)
T cd08284 231 TEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRL 310 (344)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCC
Confidence 357999999988 358899999999999999855411 112221 22345678999999999999
Q ss_pred ccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 356 KPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 356 ~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
++...+++.|++++++++|+.+.+++. +|+|+.+
T Consensus 311 ~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~~ 344 (344)
T cd08284 311 DLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLDP 344 (344)
T ss_pred ChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEecC
Confidence 865445678999999999999998877 9999853
No 71
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=4.4e-35 Score=283.31 Aligned_cols=296 Identities=29% Similarity=0.407 Sum_probs=240.4
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++++++. +.++ +.+.|++.+++|+||+.++++|+.|+..+.|.++ ....|.++|+|++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~---~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~--~~~~~~~~g~~~~G~V~~~G~~v~~ 74 (343)
T cd08235 1 MKAAVLHGPND---VRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT--DLKPPRILGHEIAGEIVEVGDGVTG 74 (343)
T ss_pred CeEEEEecCCc---eEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc--cCCCCcccccceEEEEEeeCCCCCC
Confidence 68999988764 7778 7899999999999999999999999999888653 2334678999999999999999999
Q ss_pred CCCCCEEEecccccc------------------cCCCCCCCcceeEEEecCCc-----eeeCCCCCCHHhHhccchhHHH
Q 016265 164 FKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERL-----LAPKPKNLDFVQAAGLPLAIET 220 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~------------------~~~~~~~G~~a~~~~v~~~~-----~~~iP~~l~~~~aa~l~~~~~t 220 (392)
+++||+|++..+... ..+....|+|++|+.++.+. ++++|+++++.+++.+ +++.+
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~ 153 (343)
T cd08235 75 FKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLAC 153 (343)
T ss_pred CCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHH
Confidence 999999998632100 00112369999999999998 9999999999999766 78889
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--
Q 016265 221 AYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L-- 293 (392)
Q Consensus 221 a~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~-- 293 (392)
||+++...++++|++|+|+| +|++|++++|+|+. .|++ +++++.++++.+.++++|.++++++++.++.+ .
T Consensus 154 a~~~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~-~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 231 (343)
T cd08235 154 CINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKA-SGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTD 231 (343)
T ss_pred HHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhC
Confidence 99999877899999999996 79999999999999 4999 77778888899999999999999887655422 1
Q ss_pred CCCccEEEecCc---cHHHHHHhcccCCeEEEEcCCCCC--C----------ceEE--EEeecHHHHHHHHHHHHCCCcc
Q 016265 294 PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP--P----------GFRF--VVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 294 ~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~--~----------~~~~--~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
.+++|++|||+| .+..++++++++|+++.++..... . .+.+ ......+.+++++++++++.++
T Consensus 232 ~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~ 311 (343)
T cd08235 232 GRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKID 311 (343)
T ss_pred CcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCC
Confidence 346999999987 357889999999999998754321 1 1111 1122456788899999999987
Q ss_pred cccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 357 PIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 357 ~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
+...+...|+++++.+|++.+.+++ .||+|++
T Consensus 312 ~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 312 VKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred hHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 5323456899999999999999999 8999874
No 72
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=5.5e-35 Score=280.73 Aligned_cols=297 Identities=31% Similarity=0.450 Sum_probs=243.6
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++..++. .+.++ +.+.|.+.++||+|++.++++|++|++.+.|.++. ...|.++|||++|+|+++|++++.
T Consensus 1 m~a~~~~~~~~--~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~G~~v~~ 75 (332)
T cd08259 1 MKAAILHKPNK--PLQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR--GKYPLILGHEIVGTVEEVGEGVER 75 (332)
T ss_pred CeEEEEecCCC--ceEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC--CCCCeeccccceEEEEEECCCCcc
Confidence 78999976333 37787 89999999999999999999999999999887643 345789999999999999999999
Q ss_pred CCCCCEEEecccccc------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++||+|++.....+ ..+....|+|++|++++...++++|+++++++++.+++++.|||+++
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l 155 (332)
T cd08259 76 FKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL 155 (332)
T ss_pred CCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHH
Confidence 999999998642100 01112368999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCC--CccccCCCCccEEEec
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTK--DNFEDLPEKFDVVYDA 303 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~--~~~~~~~~~~D~vid~ 303 (392)
..+.+.+|++|+|+|++|++|++++++++. .|++++++++++++.+.++++|.+.+++..+ ..+.+. .++|+++++
T Consensus 156 ~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~ 233 (332)
T cd08259 156 KRAGVKKGDTVLVTGAGGGVGIHAIQLAKA-LGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKL-GGADVVIEL 233 (332)
T ss_pred HHhCCCCCCEEEEECCCCHHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHhc-cCCCEEEEC
Confidence 778899999999999999999999999999 5999999888888999999999988887654 111112 279999999
Q ss_pred Cc--cHHHHHHhcccCCeEEEEcCCCCC-C----------ceEE--EEeecHHHHHHHHHHHHCCCcccccCCCcccchh
Q 016265 304 IG--QCDRAVKAIKEGGTVVALTGAVTP-P----------GFRF--VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFS 368 (392)
Q Consensus 304 ~G--~~~~~~~~l~~~G~iv~~g~~~~~-~----------~~~~--~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~ 368 (392)
+| ....++++++++|+++.++..... . ...+ ........++++++++++|.+++. +++.|+++
T Consensus 234 ~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~ 311 (332)
T cd08259 234 VGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPV--IDRVVSLE 311 (332)
T ss_pred CChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccc--eeEEEcHH
Confidence 98 457899999999999998754311 0 1111 112346678899999999998765 56789999
Q ss_pred hHHHHHHHHHhCCCCeeEEEE
Q 016265 369 QVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 369 ~~~~A~~~l~~~~~~gKvvl~ 389 (392)
++++||+.+.+++..||++++
T Consensus 312 ~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 312 DINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHcCCcccEEEeC
Confidence 999999999999888999874
No 73
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=5.1e-35 Score=286.57 Aligned_cols=296 Identities=24% Similarity=0.331 Sum_probs=235.7
Q ss_pred eeEEEEcccCCcceEEEeccccCCCC-CCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
||++++.+++. ++++ ++++|.+ +++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|+++.
T Consensus 1 m~~~~~~~~~~---~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~---~~~p~~~g~e~~G~V~~vG~~v~ 73 (375)
T cd08282 1 MKAVVYGGPGN---VAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG---AEPGLVLGHEAMGEVEEVGSAVE 73 (375)
T ss_pred CceEEEecCCc---eeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC---CCCCceeccccEEEEEEeCCCCC
Confidence 68999976653 7888 8999986 799999999999999999999988764 34588999999999999999999
Q ss_pred CCCCCCEEEeccccccc------C----------------------CCCCCCcceeEEEecCC--ceeeCCCCCCHH---
Q 016265 163 EFKEGDEVYGDINEKAL------E----------------------GPKQFGSLAEYTAVEER--LLAPKPKNLDFV--- 209 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~------~----------------------~~~~~G~~a~~~~v~~~--~~~~iP~~l~~~--- 209 (392)
.+++||+|++.....+. . ....+|+|++|+.++.. .++++|++++++
T Consensus 74 ~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~ 153 (375)
T cd08282 74 SLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKD 153 (375)
T ss_pred cCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhh
Confidence 99999999873221000 0 01125899999999976 899999999998
Q ss_pred hHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCC
Q 016265 210 QAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKD 288 (392)
Q Consensus 210 ~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~ 288 (392)
+++.++.++.|||+++..+++++|++|+|.| +|++|++++|+|+++ |+ ++++++.+++|+++++++|+ ..+++.+.
T Consensus 154 ~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~-G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~~ 230 (375)
T cd08282 154 DYLMLSDIFPTGWHGLELAGVQPGDTVAVFG-AGPVGLMAAYSAILR-GASRVYVVDHVPERLDLAESIGA-IPIDFSDG 230 (375)
T ss_pred heeeecchHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCC-eEeccCcc
Confidence 4677788889999999888899999999976 799999999999984 97 67787788999999999998 45676654
Q ss_pred cccc-----CCCCccEEEecCcc--------------HHHHHHhcccCCeEEEEcCCCCC-------------CceEE--
Q 016265 289 NFED-----LPEKFDVVYDAIGQ--------------CDRAVKAIKEGGTVVALTGAVTP-------------PGFRF-- 334 (392)
Q Consensus 289 ~~~~-----~~~~~D~vid~~G~--------------~~~~~~~l~~~G~iv~~g~~~~~-------------~~~~~-- 334 (392)
++.+ ..+++|++|||+|. ++.++++++++|+++.+|..... ..+.+
T Consensus 231 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (375)
T cd08282 231 DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGL 310 (375)
T ss_pred cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHH
Confidence 4321 13479999999872 57899999999999887653210 00110
Q ss_pred ----------EEeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 335 ----------VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 335 ----------~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
........+.+++++++++++++...+++.|+++++++||+.+.++. .+|+|+++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 311 LWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred HHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 00113456788899999999987544678999999999999999988 89999864
No 74
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=7.3e-35 Score=279.19 Aligned_cols=296 Identities=28% Similarity=0.372 Sum_probs=234.9
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||++++.+++.+.++++ +.+.|.++++||+|++.++++|++|++.+.|.++. ...+|.++|||++|+|+++ +++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~--~~~~ 76 (325)
T cd05280 1 FKALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV-TRNYPHTPGIDAAGTVVSS--DDPR 76 (325)
T ss_pred CceEEEcccCCCCcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC-CCCCCCccCcccEEEEEEe--CCCC
Confidence 799999998875568888 89999999999999999999999999999887542 2345788999999999999 4678
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh---cCCC-CCCeEEEE
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER---TGFS-AGKSILVL 239 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~---~~~~-~g~~VlI~ 239 (392)
+++||+|++.... .|....|+|++|+.++.+.++++|+++++++++.+++++.|+|+++.. .++. .+++|+|+
T Consensus 77 ~~~Gd~V~~~~~~---~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~ 153 (325)
T cd05280 77 FREGDEVLVTGYD---LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVT 153 (325)
T ss_pred CCCCCEEEEcccc---cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEE
Confidence 9999999986321 122236899999999999999999999999999999999999998854 3345 35799999
Q ss_pred cCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCc--ccc--CCCCccEEEecCc--cHHHHHHh
Q 016265 240 NGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDN--FED--LPEKFDVVYDAIG--QCDRAVKA 313 (392)
Q Consensus 240 Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~--~~~--~~~~~D~vid~~G--~~~~~~~~ 313 (392)
|++|++|++++|+|+.+ |+++++++.++++++.++++|++++++..+.. ... ..+++|++||++| .+..++++
T Consensus 154 g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 232 (325)
T cd05280 154 GATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQ 232 (325)
T ss_pred CCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHh
Confidence 98899999999999995 99999999999999999999999998875432 111 1347999999998 46899999
Q ss_pred cccCCeEEEEcCCCCC-C----------ceEEE---Ee-e----cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHH
Q 016265 314 IKEGGTVVALTGAVTP-P----------GFRFV---VT-S----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAF 374 (392)
Q Consensus 314 l~~~G~iv~~g~~~~~-~----------~~~~~---~~-~----~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~ 374 (392)
++++|+++.+|..... . +..+. .. . ....++.+.+++..+... . +.+.|+++++++|+
T Consensus 233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~a~ 309 (325)
T cd05280 233 TKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLE-I--VVREISLEELPEAI 309 (325)
T ss_pred hcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCcc-c--eeeEecHHHHHHHH
Confidence 9999999999864311 0 11111 01 0 113345555566666333 2 45789999999999
Q ss_pred HHHHhCCCCeeEEEEe
Q 016265 375 SYIETNKATGKVVIHP 390 (392)
Q Consensus 375 ~~l~~~~~~gKvvl~~ 390 (392)
+.+.+++..||+|+++
T Consensus 310 ~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 310 DRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHhcCCcceEEEEeC
Confidence 9999999899999863
No 75
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=7.9e-35 Score=281.90 Aligned_cols=299 Identities=28% Similarity=0.418 Sum_probs=245.0
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||||++.+++.+ +++. +.+.|.+.++||+||+.++++|+.|+..+.|.++. ..+|.++|||++|+|+++|+++..
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~~~~ 75 (345)
T cd08260 1 MRAAVYEEFGEP--LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD--VTLPHVPGHEFAGVVVEVGEDVSR 75 (345)
T ss_pred CeeEEEecCCCC--cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC--CCCCeeeccceeEEEEEECCCCcc
Confidence 799999887765 6777 88999999999999999999999999998887642 345789999999999999999999
Q ss_pred CCCCCEEEecccc------cc------------cCCCCCCCcceeEEEecCC--ceeeCCCCCCHHhHhccchhHHHHHH
Q 016265 164 FKEGDEVYGDINE------KA------------LEGPKQFGSLAEYTAVEER--LLAPKPKNLDFVQAAGLPLAIETAYE 223 (392)
Q Consensus 164 ~~vGdrV~~~~~~------~~------------~~~~~~~G~~a~~~~v~~~--~~~~iP~~l~~~~aa~l~~~~~ta~~ 223 (392)
+++||+|++.... .+ ..+...+|+|++|+.++.. .++++|+++++++++.+++++.|||+
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~ 155 (345)
T cd08260 76 WRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFR 155 (345)
T ss_pred CCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHH
Confidence 9999999872100 00 0112236999999999975 89999999999999999999999999
Q ss_pred HH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCC-Ccccc----C-CCC
Q 016265 224 GL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTK-DNFED----L-PEK 296 (392)
Q Consensus 224 al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~-~~~~~----~-~~~ 296 (392)
++ +..++.+|++|+|+| +|++|++++|+|+. .|+++++++.++++.+.++++|++.++++++ .++.+ . .++
T Consensus 156 ~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~-~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 233 (345)
T cd08260 156 ALVHQARVKPGEWVAVHG-CGGVGLSAVMIASA-LGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGG 233 (345)
T ss_pred HHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCC
Confidence 98 467889999999999 89999999999999 5999999999999999999999999999876 44322 1 237
Q ss_pred ccEEEecCc---cHHHHHHhcccCCeEEEEcCCCCC---Cc----------eEEEE--eecHHHHHHHHHHHHCCCcccc
Q 016265 297 FDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP---PG----------FRFVV--TSNGEVLKKLNPYLESGKVKPI 358 (392)
Q Consensus 297 ~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~---~~----------~~~~~--~~~~~~~~~~~~~l~~g~l~~~ 358 (392)
+|++|||+| ....++++++++|+++.+|..... .. +.+.. ......+++++++++++++.+.
T Consensus 234 ~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~ 313 (345)
T cd08260 234 AHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPE 313 (345)
T ss_pred CCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCChh
Confidence 999999997 357889999999999999754311 11 11111 1234678899999999998865
Q ss_pred cCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 359 IDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 359 ~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
..+++.|+++++++||+.+.++...||+|++
T Consensus 314 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 314 PLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred hheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 4456789999999999999999988998864
No 76
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=4.7e-35 Score=282.99 Aligned_cols=297 Identities=34% Similarity=0.478 Sum_probs=240.3
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||++++.++ +..++++ +.+.|+|+++||+||+.++++|++|++.+.+.+ ...+|.++|||++|+|+.+|++++.
T Consensus 1 m~a~~~~~~~-~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~~ 75 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF---IPSYPAILGCDFAGTVVEVGSGVTR 75 (339)
T ss_pred CceEEeccCC-CCccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc---ccCCCceeeeeeeEEEEEeCCCcCc
Confidence 7899999886 5558888 899999999999999999999999998775543 1224678999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-cC----------CCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TG----------FSA 232 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~----------~~~ 232 (392)
+++||+|++.....+ .+...+|+|++|+.++.+.++++|+++++++++.+++++.|||+++.. .+ ..+
T Consensus 76 ~~~Gd~V~~~~~~~~-~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~ 154 (339)
T cd08249 76 FKVGDRVAGFVHGGN-PNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASK 154 (339)
T ss_pred CCCCCEEEEEecccc-CCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCC
Confidence 999999998643111 122236999999999999999999999999999999999999999853 33 378
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc-----CCCCccEEEecCcc-
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAIGQ- 306 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~-----~~~~~D~vid~~G~- 306 (392)
|++|+|+|++|++|++++++|+. .|++++.++ +++|++.++++|+++++++....+.+ ..+++|++||++|.
T Consensus 155 ~~~vlI~ga~g~vg~~~~~~a~~-~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~ 232 (339)
T cd08249 155 GKPVLIWGGSSSVGTLAIQLAKL-AGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTP 232 (339)
T ss_pred CCEEEEEcChhHHHHHHHHHHHH-cCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccc
Confidence 99999999889999999999999 599988777 56899999999999999987655422 24579999999874
Q ss_pred --HHHHHHhccc--CCeEEEEcCCCCC----CceE--E-EE-----------eecHHHHHHHHHHHHCCCcccccCCCcc
Q 016265 307 --CDRAVKAIKE--GGTVVALTGAVTP----PGFR--F-VV-----------TSNGEVLKKLNPYLESGKVKPIIDPKGP 364 (392)
Q Consensus 307 --~~~~~~~l~~--~G~iv~~g~~~~~----~~~~--~-~~-----------~~~~~~~~~~~~~l~~g~l~~~~~~t~~ 364 (392)
+..+++++++ +|+++.++..... .... . .. ......+++++++++++++.+... ..
T Consensus 233 ~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 310 (339)
T cd08249 233 ESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPV--RV 310 (339)
T ss_pred hHHHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCc--ee
Confidence 5889999999 9999999765321 1111 1 00 011245778899999999887533 45
Q ss_pred cc--hhhHHHHHHHHHhCC-CCeeEEEEe
Q 016265 365 FP--FSQVVEAFSYIETNK-ATGKVVIHP 390 (392)
Q Consensus 365 ~~--l~~~~~A~~~l~~~~-~~gKvvl~~ 390 (392)
++ ++++++||+.+.+++ ..+|+|+++
T Consensus 311 ~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 311 VEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred cCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 66 999999999999998 889999864
No 77
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4.5e-35 Score=285.97 Aligned_cols=295 Identities=26% Similarity=0.354 Sum_probs=236.8
Q ss_pred eEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
||+++.+.+.. ++++ +.+.|.++++||+|++.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.+
T Consensus 2 ~a~~~~~~~~~--~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~---~~~~~i~g~e~~G~V~~vG~~v~~~ 75 (365)
T cd05279 2 KAAVLWEKGKP--LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGAGIVESIGPGVTTL 75 (365)
T ss_pred ceeEEecCCCC--cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC---CCCCcccccceeEEEEEeCCCcccC
Confidence 67888776654 7777 8999999999999999999999999999988753 3457899999999999999999999
Q ss_pred CCCCEEEecccccc------cC---------------C------------------CCCCCcceeEEEecCCceeeCCCC
Q 016265 165 KEGDEVYGDINEKA------LE---------------G------------------PKQFGSLAEYTAVEERLLAPKPKN 205 (392)
Q Consensus 165 ~vGdrV~~~~~~~~------~~---------------~------------------~~~~G~~a~~~~v~~~~~~~iP~~ 205 (392)
++||+|++.....+ .. | ....|+|++|+.++.+.++++|++
T Consensus 76 ~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 155 (365)
T cd05279 76 KPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPD 155 (365)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCC
Confidence 99999987632100 00 0 002378999999999999999999
Q ss_pred CCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeE-EEEeCCcccHHHHHhcCCcEEE
Q 016265 206 LDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASR-VAATSSTRNLEFLKSLGADLAI 283 (392)
Q Consensus 206 l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~v-v~~~~~~~~~~~~~~~G~~~vi 283 (392)
+++++++.+++++.+||+++ +.+++++|++|||+| +|++|++++|+|+.+ |+++ ++++++++|++.++++|+++++
T Consensus 156 ~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v 233 (365)
T cd05279 156 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAA-GASRIIAVDINKDKFEKAKQLGATECI 233 (365)
T ss_pred CCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCeec
Confidence 99999999999999999987 567899999999996 899999999999995 9874 5556689999999999999999
Q ss_pred eCCCC--cccc-----CCCCccEEEecCcc---HHHHHHhcc-cCCeEEEEcCCCC--CCce---------EEEEe----
Q 016265 284 DYTKD--NFED-----LPEKFDVVYDAIGQ---CDRAVKAIK-EGGTVVALTGAVT--PPGF---------RFVVT---- 337 (392)
Q Consensus 284 ~~~~~--~~~~-----~~~~~D~vid~~G~---~~~~~~~l~-~~G~iv~~g~~~~--~~~~---------~~~~~---- 337 (392)
+..+. ++.+ ..+++|++||++|. +..++++++ ++|+++.+|.... ...+ .+.-.
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 313 (365)
T cd05279 234 NPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGG 313 (365)
T ss_pred ccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccC
Confidence 87665 3211 24579999999973 578899999 9999999875431 1111 10001
Q ss_pred -ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 338 -SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 338 -~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
...+.+.+++++++++.+++....++.|+++++++||+.+++++.. |+++
T Consensus 314 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 314 WKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred CchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 2356788899999999988654567899999999999999877654 7665
No 78
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.2e-34 Score=279.86 Aligned_cols=297 Identities=31% Similarity=0.410 Sum_probs=239.8
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++++++. +++. +.+.|.++++||+|++.++++|+.|+....|.++. ..+|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~~~~~~g~e~~G~V~~~G~~v~~ 74 (337)
T cd08261 1 MKALVCEKPGR---LEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF--ASYPRILGHELSGEVVEVGEGVAG 74 (337)
T ss_pred CeEEEEeCCCc---eEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc--CCCCcccccccEEEEEEeCCCCCC
Confidence 68999987653 7788 89999999999999999999999999998887543 245788999999999999999999
Q ss_pred CCCCCEEEeccccc---cc---------------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINEK---AL---------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~~---~~---------------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++||+|++..... +. .+....|+|++|+.++++ ++++|+++++++++.+ ..+.++++++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~ 152 (337)
T cd08261 75 LKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV 152 (337)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH
Confidence 99999999732100 00 001136899999999999 9999999999999876 5667888888
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccE
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDV 299 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~ 299 (392)
+..++++|++|||+| +|.+|++++|+|+.+ |++++++++++++.++++++|+++++++.+.++.+ . .+++|+
T Consensus 153 ~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~-g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~ 230 (337)
T cd08261 153 RRAGVTAGDTVLVVG-AGPIGLGVIQVAKAR-GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADV 230 (337)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCE
Confidence 778899999999996 799999999999994 99999998999999999999999999987654322 1 346999
Q ss_pred EEecCcc---HHHHHHhcccCCeEEEEcCCCCC----------CceEEEE--eecHHHHHHHHHHHHCCCcccccCCCcc
Q 016265 300 VYDAIGQ---CDRAVKAIKEGGTVVALTGAVTP----------PGFRFVV--TSNGEVLKKLNPYLESGKVKPIIDPKGP 364 (392)
Q Consensus 300 vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~----------~~~~~~~--~~~~~~~~~~~~~l~~g~l~~~~~~t~~ 364 (392)
+|||+|. +..++++++++|+++.++..... ..+.+.. ....+.++++++++++|.+++...+...
T Consensus 231 vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~ 310 (337)
T cd08261 231 VIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHR 310 (337)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEE
Confidence 9999863 57889999999999998754311 1112111 1234578889999999999873224578
Q ss_pred cchhhHHHHHHHHHhCC-CCeeEEEEe
Q 016265 365 FPFSQVVEAFSYIETNK-ATGKVVIHP 390 (392)
Q Consensus 365 ~~l~~~~~A~~~l~~~~-~~gKvvl~~ 390 (392)
|+++++.+|++.+.+++ ..+|+|+++
T Consensus 311 ~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 311 FPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred eeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 99999999999999884 679999864
No 79
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=8.2e-35 Score=281.72 Aligned_cols=297 Identities=22% Similarity=0.292 Sum_probs=234.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCC-CCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
||++++++++. +++. +.+.|.| +++||+||+.++++|++|++.+.|.++ ...|.++|||++|+|+++|+++.
T Consensus 1 m~~~~~~~~~~---~~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v~ 73 (345)
T cd08287 1 MRATVIHGPGD---IRVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP---TRAPAPIGHEFVGVVEEVGSEVT 73 (345)
T ss_pred CceeEEecCCc---eeEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC---CCCCcccccceEEEEEEeCCCCC
Confidence 78999987664 7778 8899986 899999999999999999998888764 23478999999999999999999
Q ss_pred CCCCCCEEEecccc------------------cccCCCCCCCcceeEEEecCC--ceeeCCCCCCHHhHh-----ccchh
Q 016265 163 EFKEGDEVYGDINE------------------KALEGPKQFGSLAEYTAVEER--LLAPKPKNLDFVQAA-----GLPLA 217 (392)
Q Consensus 163 ~~~vGdrV~~~~~~------------------~~~~~~~~~G~~a~~~~v~~~--~~~~iP~~l~~~~aa-----~l~~~ 217 (392)
++++||+|++.... ....+...+|+|++|+.++.+ .++++|++++++.+. ++...
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~ 153 (345)
T cd08287 74 SVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDV 153 (345)
T ss_pred ccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcH
Confidence 99999999872111 001122345999999999975 899999999983221 22356
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----
Q 016265 218 IETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED---- 292 (392)
Q Consensus 218 ~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~---- 292 (392)
+.|||+++..+.+++|++|+|.| +|++|++++|+||+ .|++ ++++.+++++.+.++++|++.++++....+.+
T Consensus 154 ~~~a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~-~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~ 231 (345)
T cd08287 154 MGTGHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKR-LGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRE 231 (345)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHH
Confidence 78899999888899999999976 89999999999999 5997 55555677788999999999999987655422
Q ss_pred C--CCCccEEEecCc---cHHHHHHhcccCCeEEEEcCCCCCCce----------EEE--EeecHHHHHHHHHHHHCCCc
Q 016265 293 L--PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPGF----------RFV--VTSNGEVLKKLNPYLESGKV 355 (392)
Q Consensus 293 ~--~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~~~~----------~~~--~~~~~~~~~~~~~~l~~g~l 355 (392)
. ..++|+++|++| .++.++++++++|+++.++.......+ .+. .......++++++++++|++
T Consensus 232 ~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (345)
T cd08287 232 LTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRI 311 (345)
T ss_pred hcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCC
Confidence 1 347999999997 368999999999999998754411111 111 11235678999999999999
Q ss_pred ccccCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 356 KPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 356 ~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
++...+++.|+++++++|++.+.++... |++|++
T Consensus 312 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~ 345 (345)
T cd08287 312 NPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP 345 (345)
T ss_pred CHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence 8754456889999999999998877654 999864
No 80
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.9e-34 Score=277.27 Aligned_cols=293 Identities=28% Similarity=0.384 Sum_probs=240.1
Q ss_pred eeEEEEcccCCc--ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCC
Q 016265 84 MKAWLYGEYGGV--DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQV 161 (392)
Q Consensus 84 mka~v~~~~~~~--~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v 161 (392)
||++++.+.+.+ +.+++. +.+.|.++++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v 77 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP--PKLPLIPGHEIVGRVEAVGPGV 77 (329)
T ss_pred CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC--CCCCccccccccEEEEEECCCC
Confidence 789999887742 336777 77888899999999999999999999999887643 3457899999999999999999
Q ss_pred CCCCCCCEEEeccc-----c--c------------ccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHH
Q 016265 162 KEFKEGDEVYGDIN-----E--K------------ALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAY 222 (392)
Q Consensus 162 ~~~~vGdrV~~~~~-----~--~------------~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~ 222 (392)
.++++||+|++... . . ...+...+|+|++|+.++.+.++++|+++++.+++.+++++.|||
T Consensus 78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~ 157 (329)
T cd08298 78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY 157 (329)
T ss_pred CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence 99999999986210 0 0 001222368999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEe
Q 016265 223 EGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYD 302 (392)
Q Consensus 223 ~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid 302 (392)
++++.+++++|++|+|+| +|++|++++++|++ .|++++++++++++++.++++|++.+++.... ..+++|++++
T Consensus 158 ~~~~~~~~~~~~~vlV~g-~g~vg~~~~~la~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~ 231 (329)
T cd08298 158 RALKLAGLKPGQRLGLYG-FGASAHLALQIARY-QGAEVFAFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAII 231 (329)
T ss_pred HHHHhhCCCCCCEEEEEC-CcHHHHHHHHHHHH-CCCeEEEEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEE
Confidence 999888999999999997 89999999999999 59999999999999999999999888876543 2347999999
Q ss_pred cCc---cHHHHHHhcccCCeEEEEcCCCC-CCceEE-------EE----eecHHHHHHHHHHHHCCCcccccCCCcccch
Q 016265 303 AIG---QCDRAVKAIKEGGTVVALTGAVT-PPGFRF-------VV----TSNGEVLKKLNPYLESGKVKPIIDPKGPFPF 367 (392)
Q Consensus 303 ~~G---~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~-------~~----~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l 367 (392)
+.+ .++.++++++++|+++.++.... ...+.+ .+ ......+++++++++++.+++. ++.|++
T Consensus 232 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~---~~~~~~ 308 (329)
T cd08298 232 FAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPE---VETYPL 308 (329)
T ss_pred cCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCce---EEEEeH
Confidence 865 46899999999999998874321 111111 01 2335668889999999998763 478999
Q ss_pred hhHHHHHHHHHhCCCCeeEEE
Q 016265 368 SQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 368 ~~~~~A~~~l~~~~~~gKvvl 388 (392)
+++++||+.+++++..||+|+
T Consensus 309 ~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 309 EEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHHHHcCCCcceeeC
Confidence 999999999999998899874
No 81
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.4e-34 Score=282.38 Aligned_cols=296 Identities=26% Similarity=0.352 Sum_probs=239.6
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++.+ ++++ +++.|.++++||+|++.++++|+.|++.+.|.++ ..+|.++|||++|+|+++|+++..
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v~~ 74 (363)
T cd08279 1 MRAAVLHEVGKP--LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP---APLPAVLGHEGAGVVEEVGPGVTG 74 (363)
T ss_pred CeEEEEecCCCC--ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC---CCCCccccccceEEEEEeCCCccc
Confidence 799999988754 6777 8899999999999999999999999999888764 346788999999999999999999
Q ss_pred CCCCCEEEeccccc--------------ccCC------------------------CCCCCcceeEEEecCCceeeCCCC
Q 016265 164 FKEGDEVYGDINEK--------------ALEG------------------------PKQFGSLAEYTAVEERLLAPKPKN 205 (392)
Q Consensus 164 ~~vGdrV~~~~~~~--------------~~~~------------------------~~~~G~~a~~~~v~~~~~~~iP~~ 205 (392)
+++||+|++..... +..+ ....|+|++|+.++.+.++++|++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~ 154 (363)
T cd08279 75 VKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDD 154 (363)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCC
Confidence 99999999842100 0000 013589999999999999999999
Q ss_pred CCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEE
Q 016265 206 LDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAI 283 (392)
Q Consensus 206 l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi 283 (392)
+++++++.+++++.|||+++ ...++.+|++|+|+| +|++|++++++|+. .|++ ++++++++++.+.++++|+++++
T Consensus 155 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~-~G~~~Vi~~~~~~~~~~~~~~~g~~~vv 232 (363)
T cd08279 155 IPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARI-AGASRIIAVDPVPEKLELARRFGATHTV 232 (363)
T ss_pred CChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCcEEEEcCCHHHHHHHHHhCCeEEe
Confidence 99999999999999999987 467899999999995 79999999999998 4996 77778899999999999999999
Q ss_pred eCCCCcccc----C--CCCccEEEecCc---cHHHHHHhcccCCeEEEEcCCCC--CC----------ceEEE---E--e
Q 016265 284 DYTKDNFED----L--PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVT--PP----------GFRFV---V--T 337 (392)
Q Consensus 284 ~~~~~~~~~----~--~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~--~~----------~~~~~---~--~ 337 (392)
+++..++.. . .+++|++||++| .+..++++++++|+++.++.... .. ...+. + .
T Consensus 233 ~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (363)
T cd08279 233 NASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSA 312 (363)
T ss_pred CCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCc
Confidence 887654322 2 357999999988 35889999999999999875431 10 00000 0 0
Q ss_pred ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEE
Q 016265 338 SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVV 387 (392)
Q Consensus 338 ~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvv 387 (392)
.....+++++++++++++++...+++.|+++|+++||+.+.+++..+.++
T Consensus 313 ~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 313 NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 23567889999999999886533567899999999999999888764444
No 82
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=2e-34 Score=276.50 Aligned_cols=298 Identities=26% Similarity=0.355 Sum_probs=228.6
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+.++.+.+.++ +.+.|.|.++||+||+.++++|++|.+...+... ....+|.++|||++|+|++.| +.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~~~--~~~ 76 (326)
T cd08289 1 FQALVVEKDEDDVSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK-IVKRYPFIPGIDLAGTVVESN--DPR 76 (326)
T ss_pred CeeEEEeccCCcceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc-ccCCCCcCcccceeEEEEEcC--CCC
Confidence 799999988877778888 8999999999999999999999999876643211 123457899999999999964 578
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh---cCC-CCCCeEEEE
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER---TGF-SAGKSILVL 239 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~---~~~-~~g~~VlI~ 239 (392)
+++||+|++.... .+...+|+|++|+.++.+.++++|+++++++++.+++++.|||+++.. ... ..|++|+|+
T Consensus 77 ~~~Gd~V~~~~~~---~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~ 153 (326)
T cd08289 77 FKPGDEVIVTSYD---LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVT 153 (326)
T ss_pred CCCCCEEEEcccc---cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 9999999986421 122346999999999999999999999999999999999999988743 333 347899999
Q ss_pred cCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcc---ccC-CCCccEEEecCc--cHHHHHHh
Q 016265 240 NGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNF---EDL-PEKFDVVYDAIG--QCDRAVKA 313 (392)
Q Consensus 240 Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~---~~~-~~~~D~vid~~G--~~~~~~~~ 313 (392)
|++|++|++++|+|+. .|+++++++++++++++++++|++++++.++... .+. .+++|++|||+| .++.++++
T Consensus 154 g~~g~vg~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~ 232 (326)
T cd08289 154 GATGGVGSLAVSILAK-LGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLST 232 (326)
T ss_pred cCCchHHHHHHHHHHH-CCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHH
Confidence 9889999999999999 4999999999999999999999999988765321 111 357999999998 46889999
Q ss_pred cccCCeEEEEcCCCC---C--------CceEEEE---eec-HHHHHHHHHHHHCCCcccc---cCCCcccchhhHHHHHH
Q 016265 314 IKEGGTVVALTGAVT---P--------PGFRFVV---TSN-GEVLKKLNPYLESGKVKPI---IDPKGPFPFSQVVEAFS 375 (392)
Q Consensus 314 l~~~G~iv~~g~~~~---~--------~~~~~~~---~~~-~~~~~~~~~~l~~g~l~~~---~~~t~~~~l~~~~~A~~ 375 (392)
++++|+++.+|.... + ....+.. ... .....++++.+.. .+++. ..+++.|+++++.+||+
T Consensus 233 l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~ 311 (326)
T cd08289 233 LQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALK 311 (326)
T ss_pred hhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHH
Confidence 999999999986421 1 0111111 011 1122233333322 22211 12368899999999999
Q ss_pred HHHhCCCCeeEEEEe
Q 016265 376 YIETNKATGKVVIHP 390 (392)
Q Consensus 376 ~l~~~~~~gKvvl~~ 390 (392)
.+.+++..||+|+++
T Consensus 312 ~~~~~~~~gkvvv~~ 326 (326)
T cd08289 312 QILQGRVTGRTVVKL 326 (326)
T ss_pred HHhcCcccceEEEeC
Confidence 999999889999864
No 83
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.3e-34 Score=278.99 Aligned_cols=295 Identities=41% Similarity=0.671 Sum_probs=238.4
Q ss_pred eeEEEEcccCCc-ceEEEeccccCCCC-CCCeEEEEEeEEecChHhHHhhcCCCCC-------------CCCCCCCcCCC
Q 016265 84 MKAWLYGEYGGV-DVLKFDEKVTVPQV-KEDQVLIKVVAAALNPVDGKRRQGKFKA-------------TDSPLPTVPGY 148 (392)
Q Consensus 84 mka~v~~~~~~~-~~l~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~-------------~~~~~p~v~G~ 148 (392)
|||+++.+++++ +.++++ +.+.|.| +++||+||+.++++|++|++...|.... ....+|.++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 79 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR 79 (350)
T ss_pred CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence 789999888774 347777 8999999 4999999999999999999988874210 02345789999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-
Q 016265 149 DVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER- 227 (392)
Q Consensus 149 e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~- 227 (392)
|++|+|+++|++++++++||||++.... ...|+|++|+.++.+.++++|+++++++++.+++++.|||+++..
T Consensus 80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~ 153 (350)
T cd08248 80 DCSGVVVDIGSGVKSFEIGDEVWGAVPP------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNV 153 (350)
T ss_pred eeEEEEEecCCCcccCCCCCEEEEecCC------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHh
Confidence 9999999999999999999999986421 125899999999999999999999999999999999999999854
Q ss_pred cCCC----CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc---CCCCccEE
Q 016265 228 TGFS----AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED---LPEKFDVV 300 (392)
Q Consensus 228 ~~~~----~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~---~~~~~D~v 300 (392)
..+. +|++|+|+|++|++|++++++|+.+ |+++++++++ ++.+.++++|.+++++.....+.+ ..+++|++
T Consensus 154 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~v 231 (350)
T cd08248 154 GGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAW-GAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI 231 (350)
T ss_pred ccCCCccCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEE
Confidence 4554 4999999999999999999999994 9998877654 678888999999998876543322 13579999
Q ss_pred EecCc--cHHHHHHhcccCCeEEEEcCCCCC------C-------ceEE----------------E-EeecHHHHHHHHH
Q 016265 301 YDAIG--QCDRAVKAIKEGGTVVALTGAVTP------P-------GFRF----------------V-VTSNGEVLKKLNP 348 (392)
Q Consensus 301 id~~G--~~~~~~~~l~~~G~iv~~g~~~~~------~-------~~~~----------------~-~~~~~~~~~~~~~ 348 (392)
||++| ....++++++++|+++.++..... . .+.+ . .......+.++++
T Consensus 232 i~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (350)
T cd08248 232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK 311 (350)
T ss_pred EECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence 99998 468899999999999998743210 0 0000 0 0123566888999
Q ss_pred HHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 349 YLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 349 ~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
++++|.+.+. +++.|+++++.+||+.+.+++..+|++++
T Consensus 312 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 312 LVEDGKIKPV--IDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHhCCCEecc--cceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 9999998754 56889999999999999988878898864
No 84
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.6e-34 Score=273.83 Aligned_cols=294 Identities=28% Similarity=0.394 Sum_probs=236.6
Q ss_pred eEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
||+++...+.+++++++ +.|.|.+.++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|++ .++..|
T Consensus 1 ~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~~~ 76 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV-VRSYPMIPGIDAAGTVVS--SEDPRF 76 (323)
T ss_pred CeEEEccCCCCcceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC-CCCCCccceeeeEEEEEe--cCCCCC
Confidence 68888888877788999 89999999999999999999999999999887632 134578899999999998 567789
Q ss_pred CCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH---hcCCCCCC-eEEEEc
Q 016265 165 KEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE---RTGFSAGK-SILVLN 240 (392)
Q Consensus 165 ~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~---~~~~~~g~-~VlI~G 240 (392)
++||+|++.... .+...+|+|++|+.++.+.++++|+++++++++.+++.+.+|++++. ++.+.+|+ +|+|+|
T Consensus 77 ~~Gd~V~~~~~~---~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g 153 (323)
T TIGR02823 77 REGDEVIVTGYG---LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTG 153 (323)
T ss_pred CCCCEEEEccCC---CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEc
Confidence 999999986421 12223689999999999999999999999999999998889987763 44588998 999999
Q ss_pred CCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcc--ccC-CCCccEEEecCc--cHHHHHHhcc
Q 016265 241 GSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNF--EDL-PEKFDVVYDAIG--QCDRAVKAIK 315 (392)
Q Consensus 241 a~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~--~~~-~~~~D~vid~~G--~~~~~~~~l~ 315 (392)
++|++|++++++|+.+ |+++++++.++++++.++++|++++++..+... ... ..++|+++||+| .++.++++++
T Consensus 154 ~~g~vg~~~~~la~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~ 232 (323)
T TIGR02823 154 ATGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQLK 232 (323)
T ss_pred CCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHhC
Confidence 8899999999999995 999998888888889999999999888754332 112 235999999998 4688999999
Q ss_pred cCCeEEEEcCCCC---C--------CceEEEE---e-e----cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHH
Q 016265 316 EGGTVVALTGAVT---P--------PGFRFVV---T-S----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSY 376 (392)
Q Consensus 316 ~~G~iv~~g~~~~---~--------~~~~~~~---~-~----~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~ 376 (392)
++|+++.+|.... . ....+.. . . ....+..+.+++..+.++.. .+.|+++++++||+.
T Consensus 233 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~a~~~ 309 (323)
T TIGR02823 233 YGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI---TREITLEELPEALEQ 309 (323)
T ss_pred CCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc---eeeecHHHHHHHHHH
Confidence 9999999985431 1 1111111 0 0 12235666777778877643 458999999999999
Q ss_pred HHhCCCCeeEEEE
Q 016265 377 IETNKATGKVVIH 389 (392)
Q Consensus 377 l~~~~~~gKvvl~ 389 (392)
+.+++..||+|+.
T Consensus 310 ~~~~~~~~k~vv~ 322 (323)
T TIGR02823 310 ILAGQHRGRTVVD 322 (323)
T ss_pred HhCCCccceEEEe
Confidence 9999988999885
No 85
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.4e-34 Score=272.74 Aligned_cols=293 Identities=30% Similarity=0.446 Sum_probs=239.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||++++.+.+....+++. +.+.|.++++||+||+.++++|+.|++...|.++ ....|.++|||++|+|+++|. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~--~~ 75 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP--SVKFPRVLGIEAVGEVEEAPG--GT 75 (320)
T ss_pred CeEEEEcCCCCccceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCccccceeEEEEEEecC--CC
Confidence 689999877765567777 7788889999999999999999999999888653 234578899999999999995 57
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-cCCCCCCeEEEEcCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKSILVLNGS 242 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlI~Ga~ 242 (392)
+++||+|++..... +....|+|++|+.++...++++|+++++++++.+++++.|||+++.. ..+++|++|+|+|++
T Consensus 76 ~~~Gd~V~~~~~~~---~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~ 152 (320)
T cd08243 76 FTPGQRVATAMGGM---GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGT 152 (320)
T ss_pred CCCCCEEEEecCCC---CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 99999999864311 12235899999999999999999999999999999999999999864 568999999999988
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcc----ccCCCCccEEEecCcc--HHHHHHhccc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNF----EDLPEKFDVVYDAIGQ--CDRAVKAIKE 316 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~----~~~~~~~D~vid~~G~--~~~~~~~l~~ 316 (392)
|++|++++|+|+.+ |+++++++.++++.+.++++|++++++... ++ .+..+++|+++||+|. +..+++++++
T Consensus 153 g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~ 230 (320)
T cd08243 153 SSVGLAALKLAKAL-GATVTATTRSPERAALLKELGADEVVIDDG-AIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRP 230 (320)
T ss_pred ChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEecCc-cHHHHHHHhCCCceEEEECCChHHHHHHHHHhcc
Confidence 99999999999994 999999999999999999999988876432 22 1124679999999983 5888999999
Q ss_pred CCeEEEEcCCCCC---------------CceEEEE----eecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHH
Q 016265 317 GGTVVALTGAVTP---------------PGFRFVV----TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYI 377 (392)
Q Consensus 317 ~G~iv~~g~~~~~---------------~~~~~~~----~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l 377 (392)
+|+++.+|..... ....+.. ......+++++++++.+.+++. +++.|+++++++|++.+
T Consensus 231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~ 308 (320)
T cd08243 231 GGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYM 308 (320)
T ss_pred CCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHH
Confidence 9999998753100 0111111 0113457888999999998764 56789999999999999
Q ss_pred HhCCCCeeEEE
Q 016265 378 ETNKATGKVVI 388 (392)
Q Consensus 378 ~~~~~~gKvvl 388 (392)
.++...||+|+
T Consensus 309 ~~~~~~~kvvv 319 (320)
T cd08243 309 ESNRAFGKVVV 319 (320)
T ss_pred HhCCCCCcEEe
Confidence 99888889886
No 86
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=7.2e-34 Score=273.74 Aligned_cols=294 Identities=35% Similarity=0.468 Sum_probs=239.0
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++. +++. +.+.|+++++||+||+.++++|+.|++...|.++. .+|.++|+|++|+|+++|+++++
T Consensus 1 ~~a~~~~~~~~---~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~~ 73 (334)
T cd08234 1 MKALVYEGPGE---LEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVTG 73 (334)
T ss_pred CeeEEecCCCc---eEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCCC
Confidence 78999987774 7788 89999999999999999999999999999887642 36789999999999999999999
Q ss_pred CCCCCEEEecccccc------c------------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINEKA------L------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~------~------------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++||+|++...... . .+....|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++
T Consensus 74 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l 152 (334)
T cd08234 74 FKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL 152 (334)
T ss_pred CCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH
Confidence 999999987322110 0 11113689999999999999999999999998765 6778899998
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----CCCCccEE
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED----LPEKFDVV 300 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~~~~~D~v 300 (392)
+.+++++|++|+|+| +|.+|++++++|+. .|++ ++++++++++.+.++++|++.++++.+.++.. ..+++|++
T Consensus 153 ~~~~~~~g~~vlI~g-~g~vg~~~~~la~~-~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v 230 (334)
T cd08234 153 DLLGIKPGDSVLVFG-AGPIGLLLAQLLKL-NGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVV 230 (334)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEE
Confidence 888999999999997 79999999999999 5998 67778888999999999998888876654321 24579999
Q ss_pred EecCcc---HHHHHHhcccCCeEEEEcCCCCC------------CceEEE-EeecHHHHHHHHHHHHCCCcccccCCCcc
Q 016265 301 YDAIGQ---CDRAVKAIKEGGTVVALTGAVTP------------PGFRFV-VTSNGEVLKKLNPYLESGKVKPIIDPKGP 364 (392)
Q Consensus 301 id~~G~---~~~~~~~l~~~G~iv~~g~~~~~------------~~~~~~-~~~~~~~~~~~~~~l~~g~l~~~~~~t~~ 364 (392)
|||+|. ...++++++++|+++.+|..... ..+.+. .......+++++++++++++++...+...
T Consensus 231 ~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 310 (334)
T cd08234 231 IEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHR 310 (334)
T ss_pred EECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEEE
Confidence 999973 57889999999999998754321 011111 12235678899999999998764334578
Q ss_pred cchhhHHHHHHHHHhCCCCeeEEE
Q 016265 365 FPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 365 ~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
|+++++++|++.+.+ ...||+|+
T Consensus 311 ~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 311 LPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred ecHHHHHHHHHHHhc-CCceEEEe
Confidence 999999999999998 77789886
No 87
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=8.3e-34 Score=273.42 Aligned_cols=295 Identities=34% Similarity=0.530 Sum_probs=241.3
Q ss_pred eeEEEEcccCCcc---eEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCC
Q 016265 84 MKAWLYGEYGGVD---VLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQ 160 (392)
Q Consensus 84 mka~v~~~~~~~~---~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~ 160 (392)
|||+++++++..+ .+.++ +.+.|.+.+++|+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~ 77 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP--VPGQPKILGWDASGVVEAVGSE 77 (336)
T ss_pred CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC--CCCCCcccccceEEEEEEcCCC
Confidence 6899999988764 46766 7888899999999999999999999998887653 2345678999999999999999
Q ss_pred CCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCC-----CC
Q 016265 161 VKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSA-----GK 234 (392)
Q Consensus 161 v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~-----g~ 234 (392)
+..+++||+|++... ...+|+|++|+.++..+++++|+++++++++.+++++.|||+++ +.+.+.+ |+
T Consensus 78 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~ 151 (336)
T cd08252 78 VTLFKVGDEVYYAGD------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGK 151 (336)
T ss_pred CCCCCCCCEEEEcCC------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCC
Confidence 999999999998531 01358999999999999999999999999999999999999997 4567776 99
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc----cC-CCCccEEEecCc---
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE----DL-PEKFDVVYDAIG--- 305 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~----~~-~~~~D~vid~~G--- 305 (392)
+|+|+|++|++|++++|+|+.+ | +++++++.++++.++++++|++++++... .+. .. .+++|++|||+|
T Consensus 152 ~vlV~g~~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~ 229 (336)
T cd08252 152 TLLIIGGAGGVGSIAIQLAKQL-TGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQ 229 (336)
T ss_pred EEEEEcCCchHHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHH
Confidence 9999998999999999999995 9 99999999999999999999999998764 221 12 257999999987
Q ss_pred cHHHHHHhcccCCeEEEEcCCCC--------CCceEEE---Ee-----------ecHHHHHHHHHHHHCCCcccccC-CC
Q 016265 306 QCDRAVKAIKEGGTVVALTGAVT--------PPGFRFV---VT-----------SNGEVLKKLNPYLESGKVKPIID-PK 362 (392)
Q Consensus 306 ~~~~~~~~l~~~G~iv~~g~~~~--------~~~~~~~---~~-----------~~~~~~~~~~~~l~~g~l~~~~~-~t 362 (392)
.+..++++++++|+++.+|.... .....+. +. .....++++++++.+|.+++... ..
T Consensus 230 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 309 (336)
T cd08252 230 HWDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETL 309 (336)
T ss_pred HHHHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeee
Confidence 36889999999999999975421 1111111 00 11245788999999999986422 12
Q ss_pred cccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 363 GPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 363 ~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
+.|+++++++||+.+.++...||++++
T Consensus 310 ~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 310 GPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 468999999999999999888999874
No 88
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=5.9e-34 Score=272.71 Aligned_cols=286 Identities=27% Similarity=0.387 Sum_probs=235.9
Q ss_pred cccCCcc--eEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCC
Q 016265 90 GEYGGVD--VLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEG 167 (392)
Q Consensus 90 ~~~~~~~--~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vG 167 (392)
++++.+. .++++ +.+.|.+.+++|+||+.++++|+.|++.+.|.++. ...+|.++|||++|+|+++|++++.+++|
T Consensus 4 ~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~G 81 (323)
T cd05282 4 TQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS-RPPLPAVPGNEGVGVVVEVGSGVSGLLVG 81 (323)
T ss_pred CcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC-CCCCCCcCCcceEEEEEEeCCCCCCCCCC
Confidence 4444433 57777 78889999999999999999999999988877643 23467899999999999999999999999
Q ss_pred CEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcCCCcHH
Q 016265 168 DEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVG 246 (392)
Q Consensus 168 drV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~G~vG 246 (392)
|+|++... .|+|++|+.++...++++|+++++.+++.+++...+||+++. ...+.+|++|+|+|+.|++|
T Consensus 82 d~V~~~~~---------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg 152 (323)
T cd05282 82 QRVLPLGG---------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVG 152 (323)
T ss_pred CEEEEeCC---------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHH
Confidence 99998641 489999999999999999999999999999999999999985 45689999999999889999
Q ss_pred HHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCcc--HHHHHHhcccCC
Q 016265 247 SLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIGQ--CDRAVKAIKEGG 318 (392)
Q Consensus 247 ~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G~--~~~~~~~l~~~G 318 (392)
++++++|+. .|++++++++++++++.++++|+++++++.+..+.+ . .+++|++|||+|. ....+++++++|
T Consensus 153 ~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g 231 (323)
T cd05282 153 RMLIQLAKL-LGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGG 231 (323)
T ss_pred HHHHHHHHH-CCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCC
Confidence 999999999 499999999999999999999999999887644322 1 3579999999983 567899999999
Q ss_pred eEEEEcCCCCC-----------CceEEEE---ee-----c----HHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHH
Q 016265 319 TVVALTGAVTP-----------PGFRFVV---TS-----N----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFS 375 (392)
Q Consensus 319 ~iv~~g~~~~~-----------~~~~~~~---~~-----~----~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~ 375 (392)
+++.+|..... ....+.. .. . .+.++++++++.++++.+. +++.|+++++.+||+
T Consensus 232 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~ 309 (323)
T cd05282 232 TLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVA 309 (323)
T ss_pred EEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHHHH
Confidence 99998744211 1111111 00 1 2457788899999998764 468899999999999
Q ss_pred HHHhCCCCeeEEEE
Q 016265 376 YIETNKATGKVVIH 389 (392)
Q Consensus 376 ~l~~~~~~gKvvl~ 389 (392)
.+.+++..||+|++
T Consensus 310 ~~~~~~~~~kvv~~ 323 (323)
T cd05282 310 AAEQPGRGGKVLLT 323 (323)
T ss_pred HHhcCCCCceEeeC
Confidence 99998888999874
No 89
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=5.8e-34 Score=275.57 Aligned_cols=295 Identities=27% Similarity=0.381 Sum_probs=236.3
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++++.+. +.++ +.+.|+++++||+||+.++++|+.|+..+.|.++ ...|.++|+|++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~---l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~---~~~~~~~g~~~~G~V~~~g~~v~~ 73 (343)
T cd08236 1 MKALVLTGPGD---LRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA---YHPPLVLGHEFSGTVEEVGSGVDD 73 (343)
T ss_pred CeeEEEecCCc---eeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC---CCCCcccCcceEEEEEEECCCCCc
Confidence 79999988754 7777 8899999999999999999999999998877642 234678999999999999999999
Q ss_pred CCCCCEEEeccccc------------------ccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINEK------------------ALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~~------------------~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
|++||+|++..... ...+....|+|++|+.++++.++++|+++++++++.+ ..+.|||+++
T Consensus 74 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l 152 (343)
T cd08236 74 LAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAV 152 (343)
T ss_pred CCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHH
Confidence 99999999862110 0111224699999999999999999999999999877 5678999999
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc---C--CCCccE
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED---L--PEKFDV 299 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~---~--~~~~D~ 299 (392)
....+++|++|+|+| +|.+|++++|+|+.+ |++ ++++++++++.++++++|++.+++++.....+ . .+++|+
T Consensus 153 ~~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~-G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 230 (343)
T cd08236 153 RLAGITLGDTVVVIG-AGTIGLLAIQWLKIL-GAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADL 230 (343)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCCE
Confidence 888899999999996 799999999999994 997 87888888899999999999999876544222 1 246999
Q ss_pred EEecCc---cHHHHHHhcccCCeEEEEcCCCCCC-------------ceEEE---Ee----ecHHHHHHHHHHHHCCCcc
Q 016265 300 VYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP-------------GFRFV---VT----SNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 300 vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~~-------------~~~~~---~~----~~~~~~~~~~~~l~~g~l~ 356 (392)
+|||+| .+..++++|+++|+++.+|...... ...+. .. ...+.+++++++++++.+.
T Consensus 231 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (343)
T cd08236 231 VIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIK 310 (343)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCC
Confidence 999987 3588999999999999997443210 11111 11 0145678899999999986
Q ss_pred cccCCCcccchhhHHHHHHHHHh-CCCCeeEEE
Q 016265 357 PIIDPKGPFPFSQVVEAFSYIET-NKATGKVVI 388 (392)
Q Consensus 357 ~~~~~t~~~~l~~~~~A~~~l~~-~~~~gKvvl 388 (392)
+...+...|++++++++++.+.+ +...||+|+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 311 VEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred hHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 32224578999999999999998 566688874
No 90
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.7e-33 Score=270.76 Aligned_cols=300 Identities=33% Similarity=0.477 Sum_probs=245.9
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||||+++..+..+.++++ +.+.|.++++|++|++.++++|++|++...|.++. ....|.++|||++|+|+++|+++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP-PVKDPLIPLSDGAGEVVAVGEGVTR 78 (336)
T ss_pred CeEEEEeccCCCcceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcccccceeEEEEEeCCCCcC
Confidence 799999877655668887 78888899999999999999999999998887643 2346788999999999999999999
Q ss_pred CCCCCEEEeccccc------------ccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCC
Q 016265 164 FKEGDEVYGDINEK------------ALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGF 230 (392)
Q Consensus 164 ~~vGdrV~~~~~~~------------~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~ 230 (392)
+++||+|++..... ...|....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++. ...+
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~ 158 (336)
T cd08276 79 FKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPL 158 (336)
T ss_pred CCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCC
Confidence 99999999864211 0122223689999999999999999999999999999999999999985 4689
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCC-Ccccc----C--CCCccEEEec
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTK-DNFED----L--PEKFDVVYDA 303 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~-~~~~~----~--~~~~D~vid~ 303 (392)
++|++|+|+| +|++|++++++|+.. |+++++++.++++++.++++|.+++++... .++.+ . .+++|++||+
T Consensus 159 ~~g~~vli~g-~g~~g~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 236 (336)
T cd08276 159 KPGDTVLVQG-TGGVSLFALQFAKAA-GARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEV 236 (336)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEEC
Confidence 9999999995 899999999999995 999999999999999999999999998765 33322 1 3579999999
Q ss_pred Cc--cHHHHHHhcccCCeEEEEcCCCCC-----------CceEEE--EeecHHHHHHHHHHHHCCCcccccCCCcccchh
Q 016265 304 IG--QCDRAVKAIKEGGTVVALTGAVTP-----------PGFRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFS 368 (392)
Q Consensus 304 ~G--~~~~~~~~l~~~G~iv~~g~~~~~-----------~~~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~ 368 (392)
+| ....++++++++|+++.+|..... ....+. .......+.+++++++++.+.+. .++.|+++
T Consensus 237 ~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~ 314 (336)
T cd08276 237 GGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPV--IDRVFPFE 314 (336)
T ss_pred CChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccc--cCcEEeHH
Confidence 87 468899999999999999764311 111111 11235678889999998888764 45789999
Q ss_pred hHHHHHHHHHhCCCCeeEEEE
Q 016265 369 QVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 369 ~~~~A~~~l~~~~~~gKvvl~ 389 (392)
+++++|+.+.+++..+|++++
T Consensus 315 ~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 315 EAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred HHHHHHHHHHhCCCCceEEEe
Confidence 999999999998888999875
No 91
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5.2e-34 Score=275.83 Aligned_cols=299 Identities=25% Similarity=0.306 Sum_probs=229.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCC-CCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF-KATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
||++++.+.++ .+++. +.|.|.|+++||+||+.++++|++|++++.+.. ......+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~--~~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~ 77 (341)
T PRK05396 1 MKALVKLKAEP--GLWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT 77 (341)
T ss_pred CceEEEecCCC--ceEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence 68999987664 37888 899999999999999999999999999876632 111234677899999999999999999
Q ss_pred CCCCCCEEEeccccccc------------------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 163 EFKEGDEVYGDINEKAL------------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~------------------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
++++||+|++.....+. .+...+|+|++|+.++.+.++++|+++++++++.+ ..+.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~ 156 (341)
T PRK05396 78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT 156 (341)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence 99999999985321110 01113689999999999999999999999888744 455566665
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKF 297 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~ 297 (392)
+.. ...+|++|+|.| +|++|++++|+|++ .|+ ++++++.++++.++++++|+++++++++.++.+ . .+++
T Consensus 157 ~~~-~~~~g~~vlV~~-~g~vg~~~~~la~~-~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (341)
T PRK05396 157 ALS-FDLVGEDVLITG-AGPIGIMAAAVAKH-VGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGF 233 (341)
T ss_pred HHc-CCCCCCeEEEEC-CCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCC
Confidence 543 346899999986 79999999999999 598 466677788899999999999999887655422 2 3579
Q ss_pred cEEEecCc---cHHHHHHhcccCCeEEEEcCCCCCCc----------eEEEE---eecHHHHHHHHHHHHCCCcccccCC
Q 016265 298 DVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPPG----------FRFVV---TSNGEVLKKLNPYLESGKVKPIIDP 361 (392)
Q Consensus 298 D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~~~----------~~~~~---~~~~~~~~~~~~~l~~g~l~~~~~~ 361 (392)
|++|||.| .+..++++++++|+++.+|....... +.+.. ......+..+++++.++ ++....+
T Consensus 234 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 312 (341)
T PRK05396 234 DVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPII 312 (341)
T ss_pred CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHhe
Confidence 99999987 35889999999999999986432111 11111 11123455678888888 4332235
Q ss_pred CcccchhhHHHHHHHHHhCCCCeeEEEEeC
Q 016265 362 KGPFPFSQVVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 362 t~~~~l~~~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
.+.|+++++++||+.+.++. .||++++++
T Consensus 313 ~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 313 THRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred EEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 67899999999999998877 799999864
No 92
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1e-33 Score=273.44 Aligned_cols=289 Identities=26% Similarity=0.389 Sum_probs=228.1
Q ss_pred EEEeccccCCCCCCCeEEEEEeEEecChHhHHhhc-CCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEecccc
Q 016265 98 LKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQ-GKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINE 176 (392)
Q Consensus 98 l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~ 176 (392)
++++ +.+.|.++++||+||+.++++|++|++.+. |.++.....+|.++|||++|+|+++|++|++|++||+|++....
T Consensus 9 ~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~ 87 (339)
T cd08232 9 LRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSR 87 (339)
T ss_pred eEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCC
Confidence 7888 789999999999999999999999988763 43321122457789999999999999999999999999873210
Q ss_pred ccc------------------CC-----CCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCC
Q 016265 177 KAL------------------EG-----PKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAG 233 (392)
Q Consensus 177 ~~~------------------~~-----~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g 233 (392)
.+. .+ ....|+|++|+.++.+.++++|+++++++++. ..++.++|+++.+....+|
T Consensus 88 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~~~ 166 (339)
T cd08232 88 PCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDLAG 166 (339)
T ss_pred cCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCCCC
Confidence 000 00 11369999999999999999999999999875 5777899999976554499
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCccccC---CCCccEEEecCcc---
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVVYDAIGQ--- 306 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~---~~~~D~vid~~G~--- 306 (392)
++|||.| +|++|++++|+|+.+ |+ ++++++.++++.++++++|++++++++...+.+. .+++|++|||.|.
T Consensus 167 ~~VLI~g-~g~vG~~~~~lak~~-G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~g~~~~ 244 (339)
T cd08232 167 KRVLVTG-AGPIGALVVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAPAA 244 (339)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECCCCHHH
Confidence 9999986 799999999999995 98 6777778888888889999999998865443222 3469999999873
Q ss_pred HHHHHHhcccCCeEEEEcCCCCCC----------ceEEE-EeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHH
Q 016265 307 CDRAVKAIKEGGTVVALTGAVTPP----------GFRFV-VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFS 375 (392)
Q Consensus 307 ~~~~~~~l~~~G~iv~~g~~~~~~----------~~~~~-~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~ 375 (392)
++..+++|+++|+++.++...... .+.+. .......++++++++++|.+++...+.+.|+++++++|++
T Consensus 245 ~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~ 324 (339)
T cd08232 245 LASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFA 324 (339)
T ss_pred HHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHH
Confidence 578999999999999987543111 11111 1123456888999999999876544567899999999999
Q ss_pred HHHhCCCCeeEEEEe
Q 016265 376 YIETNKATGKVVIHP 390 (392)
Q Consensus 376 ~l~~~~~~gKvvl~~ 390 (392)
.+.++...||+|+++
T Consensus 325 ~~~~~~~~gkvvv~~ 339 (339)
T cd08232 325 LAADRTRSVKVQLSF 339 (339)
T ss_pred HHHhCCCceeEEEeC
Confidence 999888889999874
No 93
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=3e-33 Score=269.06 Aligned_cols=302 Identities=35% Similarity=0.520 Sum_probs=244.9
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++...+....+++. +.+.|.+.+++|+|++.++++|++|++.+.|..+. ...+|.++|||++|+|+++|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI-KLPLPHILGSDGAGVVEAVGPGVTN 78 (342)
T ss_pred CeEEEEecCCCccceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC-CCCCCeecccceEEEEEEeCCCCCC
Confidence 789999866655567887 77888899999999999999999999998886532 2345789999999999999999999
Q ss_pred CCCCCEEEeccccc------------------ccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINEK------------------ALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~~------------------~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++||+|++..... ...|....|+|++|+.++.+.++++|+++++++++.+++++.+||+++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l 158 (342)
T cd08266 79 VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHML 158 (342)
T ss_pred CCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHH
Confidence 99999999863210 011222468899999999999999999999999999999999999997
Q ss_pred -HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc------CCCCcc
Q 016265 226 -ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED------LPEKFD 298 (392)
Q Consensus 226 -~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~------~~~~~D 298 (392)
+...+.+|++|+|+|+++++|++++++++. .|++++++++++++++.++.+|.+.+++....++.+ ..+++|
T Consensus 159 ~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 237 (342)
T cd08266 159 VTRARLRPGETVLVHGAGSGVGSAAIQIAKL-FGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVD 237 (342)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCc
Confidence 457889999999999889999999999999 599999999998999999889988888765543321 134799
Q ss_pred EEEecCc--cHHHHHHhcccCCeEEEEcCCCCC-C----------ceEEE--EeecHHHHHHHHHHHHCCCcccccCCCc
Q 016265 299 VVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP-P----------GFRFV--VTSNGEVLKKLNPYLESGKVKPIIDPKG 363 (392)
Q Consensus 299 ~vid~~G--~~~~~~~~l~~~G~iv~~g~~~~~-~----------~~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~ 363 (392)
+++++.| .++.++++++++|+++.++..... . ...+. .......+.+++++++++.+++. +++
T Consensus 238 ~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~ 315 (342)
T cd08266 238 VVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPV--IDS 315 (342)
T ss_pred EEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccc--eee
Confidence 9999998 468899999999999999754311 1 11111 11234578889999999998764 568
Q ss_pred ccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 364 PFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 364 ~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
.|+++++++|++.+.++...+|+++++
T Consensus 316 ~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 316 VFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred eEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 899999999999999888889999864
No 94
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=7.5e-34 Score=272.67 Aligned_cols=289 Identities=30% Similarity=0.459 Sum_probs=228.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||++++..++ .+.++++ +.+.|+++++||+||+.++++|++|++.+.+.. ...+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~~ 75 (325)
T cd08264 1 MKALVFEKSG-IENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK---VKPMPHIPGAEFAGVVEEVGDHVKG 75 (325)
T ss_pred CeeEEeccCC-CCceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCCC---CCCCCeecccceeEEEEEECCCCCC
Confidence 7899998766 4557887 788888999999999999999999998876521 1235778999999999999999999
Q ss_pred CCCCCEEEeccccc------cc------------CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 164 FKEGDEVYGDINEK------AL------------EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 164 ~~vGdrV~~~~~~~------~~------------~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
+++||+|++..... +. .+....|+|++|+.++.+.++++|+++++++++.+++++.+||+++
T Consensus 76 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l 155 (325)
T cd08264 76 VKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL 155 (325)
T ss_pred CCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 99999998752210 00 0111358999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCC--ccccCCCCccEEEec
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKD--NFEDLPEKFDVVYDA 303 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~--~~~~~~~~~D~vid~ 303 (392)
..+++++|++|+|+|++|++|++++++|+.+ |+++++++ +.+.++++|++++++.++. .+.+..+++|+++|+
T Consensus 156 ~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~-G~~v~~~~----~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~ 230 (325)
T cd08264 156 KTAGLGPGETVVVFGASGNTGIFAVQLAKMM-GAEVIAVS----RKDWLKEFGADEVVDYDEVEEKVKEITKMADVVINS 230 (325)
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEe----HHHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEEC
Confidence 8888999999999998899999999999994 99888775 3477788999999887541 122222689999999
Q ss_pred Cc--cHHHHHHhcccCCeEEEEcCCC-CCCceE----------EE--EeecHHHHHHHHHHHHCCCcccccCCCcccchh
Q 016265 304 IG--QCDRAVKAIKEGGTVVALTGAV-TPPGFR----------FV--VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFS 368 (392)
Q Consensus 304 ~G--~~~~~~~~l~~~G~iv~~g~~~-~~~~~~----------~~--~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~ 368 (392)
+| .+..++++++++|+++.++... ....++ .. .....+.+.++++++...+ . .+.+.|+++
T Consensus 231 ~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~--~~~~~~~~~ 306 (325)
T cd08264 231 LGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK--V--KVWKTFKLE 306 (325)
T ss_pred CCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC--c--eeEEEEcHH
Confidence 98 4688999999999999997542 111111 00 0112457888889886443 2 245789999
Q ss_pred hHHHHHHHHHhCCCCeeE
Q 016265 369 QVVEAFSYIETNKATGKV 386 (392)
Q Consensus 369 ~~~~A~~~l~~~~~~gKv 386 (392)
|+++||+.+.++...+|+
T Consensus 307 ~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 307 EAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHcCCCcccc
Confidence 999999999988777775
No 95
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3.4e-33 Score=267.77 Aligned_cols=296 Identities=26% Similarity=0.351 Sum_probs=237.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.++|.++.++++ +.+.|.|+++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|++ +++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~~ 76 (324)
T cd08288 1 FKALVLEKDDGGTSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI-VRTFPLVPGIDLAGTVVE--SSSPR 76 (324)
T ss_pred CeeEEEeccCCCcceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc-cCCCCCccccceEEEEEe--CCCCC
Confidence 799999988876668888 89999999999999999999999999988876531 123577899999999998 77788
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH---hcCCC-CCCeEEEE
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE---RTGFS-AGKSILVL 239 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~---~~~~~-~g~~VlI~ 239 (392)
+++||+|++... ..+....|+|++|+.++.+.++++|+++++++++.++++++++++++. ..... +|++|+|+
T Consensus 77 ~~~Gd~V~~~~~---~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ 153 (324)
T cd08288 77 FKPGDRVVLTGW---GVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVT 153 (324)
T ss_pred CCCCCEEEECCc---cCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEE
Confidence 999999998531 011113589999999999999999999999999999999888887764 45555 67899999
Q ss_pred cCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcc--ccC-CCCccEEEecCcc--HHHHHHhc
Q 016265 240 NGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNF--EDL-PEKFDVVYDAIGQ--CDRAVKAI 314 (392)
Q Consensus 240 Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~--~~~-~~~~D~vid~~G~--~~~~~~~l 314 (392)
|++|++|++++|+|+.+ |+++++++.+++|.+.++++|+++++++.+... ... ..++|.+||++|. ...++..+
T Consensus 154 ga~g~vg~~~~~~A~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 232 (324)
T cd08288 154 GAAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQT 232 (324)
T ss_pred CCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHHh
Confidence 98899999999999995 999999999999999999999999998865332 111 3368999999984 56788889
Q ss_pred ccCCeEEEEcCCCC-----------CCceEEEE----e----ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHH
Q 016265 315 KEGGTVVALTGAVT-----------PPGFRFVV----T----SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFS 375 (392)
Q Consensus 315 ~~~G~iv~~g~~~~-----------~~~~~~~~----~----~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~ 375 (392)
+.+|+++.+|.... .....+.. . ...+.++.+.+++..+.+++. ++.|+++++++||+
T Consensus 233 ~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~a~~ 309 (324)
T cd08288 233 RYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL---TREIPLADVPDAAE 309 (324)
T ss_pred cCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc---ceeecHHHHHHHHH
Confidence 99999998875321 01111110 0 113456777888888888653 57899999999999
Q ss_pred HHHhCCCCeeEEEEe
Q 016265 376 YIETNKATGKVVIHP 390 (392)
Q Consensus 376 ~l~~~~~~gKvvl~~ 390 (392)
.+.+++..||+++++
T Consensus 310 ~~~~~~~~~~vvv~~ 324 (324)
T cd08288 310 AILAGQVRGRVVVDV 324 (324)
T ss_pred HHhcCCccCeEEEeC
Confidence 999999999999863
No 96
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.5e-33 Score=266.10 Aligned_cols=297 Identities=41% Similarity=0.665 Sum_probs=242.8
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++..+.++++ +.+.|.+.+++|+|++.++++|++|++...|.+. .....|.++|||++|+|+++|+++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (326)
T cd08272 1 MKALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA-ARPPLPAILGCDVAGVVEAVGEGVTR 78 (326)
T ss_pred CeEEEEccCCCchheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCCC
Confidence 799999988877668887 7788889999999999999999999998887653 22335778999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGS 242 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~ 242 (392)
+++||+|++.....+ ...|+|++|+.++...++++|+++++.+++.+++.+.+||+++ +..++++|++|+|+|++
T Consensus 79 ~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~ 154 (326)
T cd08272 79 FRVGDEVYGCAGGLG----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGA 154 (326)
T ss_pred CCCCCEEEEccCCcC----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 999999998752111 1258999999999999999999999999999999999999997 56889999999999999
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCc--cHHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIG--QCDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G--~~~~~~~~l 314 (392)
|++|++++++|+. .|+++++++++ ++.++++++|++.+++.... +.+ . .+++|+++||+| ....+++++
T Consensus 155 ~~~g~~~~~~a~~-~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l 231 (326)
T cd08272 155 GGVGHVAVQLAKA-AGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAV 231 (326)
T ss_pred CcHHHHHHHHHHH-cCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHh
Confidence 9999999999999 59999988888 88999999999988887654 322 1 347999999988 357789999
Q ss_pred ccCCeEEEEcCCCC-------CCceEE--EE-e----------ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHH
Q 016265 315 KEGGTVVALTGAVT-------PPGFRF--VV-T----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAF 374 (392)
Q Consensus 315 ~~~G~iv~~g~~~~-------~~~~~~--~~-~----------~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~ 374 (392)
+++|+++.++.... .....+ .. . .....+.++++++.++.+++.+.+ +.|++++++++|
T Consensus 232 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~ 310 (326)
T cd08272 232 ALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDP-RTFPLEEAAAAH 310 (326)
T ss_pred ccCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccc-ceecHHHHHHHH
Confidence 99999998864420 011111 11 0 013567888899999988765322 789999999999
Q ss_pred HHHHhCCCCeeEEEEe
Q 016265 375 SYIETNKATGKVVIHP 390 (392)
Q Consensus 375 ~~l~~~~~~gKvvl~~ 390 (392)
+.+.++...+|+++.+
T Consensus 311 ~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 311 ARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHcCCcccEEEEEC
Confidence 9999888889999863
No 97
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.4e-33 Score=268.46 Aligned_cols=288 Identities=33% Similarity=0.529 Sum_probs=239.3
Q ss_pred eEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
||+++...+.++.+++. +.+.|.|.++||+|++.++++|++|+..+.|.++.. ..+|.++|||++|+|+++|+++..|
T Consensus 2 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~~ 79 (331)
T cd08273 2 REVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-PPLPFTPGYDLVGRVDALGSGVTGF 79 (331)
T ss_pred eeEEEccCCCcccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceEEEEEEeCCCCccC
Confidence 78999988877778888 889999999999999999999999999988876422 3468899999999999999999999
Q ss_pred CCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-cCCCCCCeEEEEcCCC
Q 016265 165 KEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKSILVLNGSG 243 (392)
Q Consensus 165 ~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlI~Ga~G 243 (392)
++||+|++... .|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. ..+.+|++|+|+|+.|
T Consensus 80 ~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g 150 (331)
T cd08273 80 EVGDRVAALTR---------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASG 150 (331)
T ss_pred CCCCEEEEeCC---------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCc
Confidence 99999998642 4899999999999999999999999999999999999999854 6899999999999889
Q ss_pred cHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc---CCCCccEEEecCc--cHHHHHHhcccCC
Q 016265 244 GVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED---LPEKFDVVYDAIG--QCDRAVKAIKEGG 318 (392)
Q Consensus 244 ~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~---~~~~~D~vid~~G--~~~~~~~~l~~~G 318 (392)
++|++++++|+. .|++++.++. +++.+.++++|++. ++....++.+ ..+++|+++||+| ....++++++++|
T Consensus 151 ~ig~~~~~~a~~-~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g 227 (331)
T cd08273 151 GVGQALLELALL-AGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGG 227 (331)
T ss_pred HHHHHHHHHHHH-cCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchHHHHHHHHHhcCCC
Confidence 999999999999 5999888887 88889999999754 4544333221 2347999999988 3678899999999
Q ss_pred eEEEEcCCCCCCc-------------------eE-------E-EEe--------ecHHHHHHHHHHHHCCCcccccCCCc
Q 016265 319 TVVALTGAVTPPG-------------------FR-------F-VVT--------SNGEVLKKLNPYLESGKVKPIIDPKG 363 (392)
Q Consensus 319 ~iv~~g~~~~~~~-------------------~~-------~-~~~--------~~~~~~~~~~~~l~~g~l~~~~~~t~ 363 (392)
+++.+|....... .. + ... ...+.++++++++++|.+++. +++
T Consensus 228 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~--~~~ 305 (331)
T cd08273 228 TLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK--IAK 305 (331)
T ss_pred EEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC--cce
Confidence 9999976542110 00 0 000 013567888999999998764 567
Q ss_pred ccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 364 PFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 364 ~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
.|++++++++|+.+.++...||+|+
T Consensus 306 ~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 306 RLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred EEcHHHHHHHHHHHHcCCCcceEEe
Confidence 8999999999999998888899886
No 98
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.7e-33 Score=272.36 Aligned_cols=299 Identities=29% Similarity=0.358 Sum_probs=232.6
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCC-CCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF-KATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
||+++++.++. .+++. +.+.|.|+++|++||+.++++|+.|++.+.+.. ......+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~ 77 (341)
T cd05281 1 MKAIVKTKAGP--GAELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT 77 (341)
T ss_pred CcceEEecCCC--ceEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence 78999987775 37888 889999999999999999999999998765532 111223567899999999999999999
Q ss_pred CCCCCCEEEecccccc------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 163 EFKEGDEVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
.+++||+|++.....+ ..+....|+|++|++++.+.++++|++++++.+ +++..+.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~ 156 (341)
T cd05281 78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHT 156 (341)
T ss_pred CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHH
Confidence 9999999988521100 001113589999999999999999999998544 566777788888
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc-----CCCCcc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFD 298 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~-----~~~~~D 298 (392)
+. ...++|++|+|.| +|++|++++|+|+. .|+ ++++++.+++|.+.++++|++++++++..++.. ..+++|
T Consensus 157 ~~-~~~~~g~~vlV~g-~g~vg~~~~~la~~-~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd 233 (341)
T cd05281 157 VL-AGDVSGKSVLITG-CGPIGLMAIAVAKA-AGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVD 233 (341)
T ss_pred HH-hcCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCC
Confidence 75 4567899999986 79999999999998 498 577777788899999999999998876554421 135799
Q ss_pred EEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCc-----------eEEEE---eecHHHHHHHHHHHHCCCcccccCC
Q 016265 299 VVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPG-----------FRFVV---TSNGEVLKKLNPYLESGKVKPIIDP 361 (392)
Q Consensus 299 ~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~-----------~~~~~---~~~~~~~~~~~~~l~~g~l~~~~~~ 361 (392)
++|||+|. ...++++++++|+++.++....... +.+.. ....+.+.++++++++|.+.+...+
T Consensus 234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 313 (341)
T cd05281 234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVI 313 (341)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHhe
Confidence 99999873 5788999999999999875431111 11111 1123457788999999998754345
Q ss_pred CcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 362 KGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 362 t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
+..++++++++||+.+.+++ .||+|++|
T Consensus 314 ~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 314 THKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred EEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 67899999999999999998 89999875
No 99
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=5.1e-33 Score=263.50 Aligned_cols=294 Identities=45% Similarity=0.683 Sum_probs=242.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCC-CCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||++++.++..+.+.++ +.+.|.++++||+|++.++++|+.|++.+.|.+.. ....+|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~ 79 (309)
T cd05289 1 MKAVRIHEYGGPEVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT 79 (309)
T ss_pred CceEEEcccCCccceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence 789999888876656777 77788899999999999999999999988876421 1234578999999999999999999
Q ss_pred CCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhc-CCCCCCeEEEEcC
Q 016265 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERT-GFSAGKSILVLNG 241 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~-~~~~g~~VlI~Ga 241 (392)
++++||+|++.... ...|+|++|+.++...++++|+++++..++.+++.+.++|+++... .+.+|++|+|+|+
T Consensus 80 ~~~~G~~V~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~ 153 (309)
T cd05289 80 GFKVGDEVFGMTPF------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGA 153 (309)
T ss_pred CCCCCCEEEEccCC------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecC
Confidence 99999999986421 1248999999999999999999999999999999999999998654 4899999999998
Q ss_pred CCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc--cCCCCccEEEecCcc--HHHHHHhcccC
Q 016265 242 SGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE--DLPEKFDVVYDAIGQ--CDRAVKAIKEG 317 (392)
Q Consensus 242 ~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~--~~~~~~D~vid~~G~--~~~~~~~l~~~ 317 (392)
.|++|++++++++. .|+++++++.++ +.+.++++|.+.+++....++. ...+++|+++|++|. ...++++++++
T Consensus 154 ~g~~g~~~~~~a~~-~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~ 231 (309)
T cd05289 154 AGGVGSFAVQLAKA-RGARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKPG 231 (309)
T ss_pred CchHHHHHHHHHHH-cCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhcC
Confidence 89999999999999 599998888777 8888899999888887665443 233579999999984 58899999999
Q ss_pred CeEEEEcCCCCCC------ceEEE---EeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 318 GTVVALTGAVTPP------GFRFV---VTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 318 G~iv~~g~~~~~~------~~~~~---~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
|+++.++...... ...+. .......+.+++++++++.+++. +++.|++++++++|+.+.++...+|+++
T Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 232 GRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPV--VDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEe--eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 9999997643211 11111 11126778999999999988754 5788999999999999998887788874
No 100
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.7e-33 Score=271.12 Aligned_cols=295 Identities=27% Similarity=0.357 Sum_probs=229.4
Q ss_pred EEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcC-CCCCCCCCCCCcCCCceeEEEEEeCCCCCCCC
Q 016265 87 WLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQG-KFKATDSPLPTVPGYDVAGVVVKVGTQVKEFK 165 (392)
Q Consensus 87 ~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g-~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~ 165 (392)
+++.+.+. ++++ +.+.|.+.++||+|++.++++|+.|++.+.+ ........+|.++|||++|+|+++|+++.+++
T Consensus 2 ~~~~~~~~---~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (343)
T cd05285 2 AVLHGPGD---LRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLK 77 (343)
T ss_pred ceEecCCc---eeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCC
Confidence 45555533 7888 8899999999999999999999999987642 22111123567899999999999999999999
Q ss_pred CCCEEEeccccc------c------------c-CCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH
Q 016265 166 EGDEVYGDINEK------A------------L-EGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE 226 (392)
Q Consensus 166 vGdrV~~~~~~~------~------------~-~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~ 226 (392)
+||+|++..... + . ......|+|++|++++.+.++++|+++++++++.+ .++.+|+++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~~ 156 (343)
T cd05285 78 VGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHACR 156 (343)
T ss_pred CCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHHH
Confidence 999998632100 0 0 00113689999999999999999999999998876 57788999988
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcc---c----cC--CCC
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNF---E----DL--PEK 296 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~---~----~~--~~~ 296 (392)
.+.+++|++|+|+| +|++|++++|+||. .|++ ++++++++++.++++++|+++++++++.++ . +. .++
T Consensus 157 ~~~~~~g~~vlI~g-~g~vG~~a~~lak~-~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T cd05285 157 RAGVRPGDTVLVFG-AGPIGLLTAAVAKA-FGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKG 234 (343)
T ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCC
Confidence 89999999999986 79999999999999 5998 777778888999999999999999876553 1 11 346
Q ss_pred ccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCc----------eEEE-EeecHHHHHHHHHHHHCCCcccccCCC
Q 016265 297 FDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPG----------FRFV-VTSNGEVLKKLNPYLESGKVKPIIDPK 362 (392)
Q Consensus 297 ~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~----------~~~~-~~~~~~~~~~~~~~l~~g~l~~~~~~t 362 (392)
+|++|||+|. +..++++++++|+++.++....... +.+. .....+.+++++++++++.+.......
T Consensus 235 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 314 (343)
T cd05285 235 PDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLIT 314 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEE
Confidence 9999999883 5789999999999999875432111 1111 111236788899999999876432345
Q ss_pred cccchhhHHHHHHHHHhCC-CCeeEEE
Q 016265 363 GPFPFSQVVEAFSYIETNK-ATGKVVI 388 (392)
Q Consensus 363 ~~~~l~~~~~A~~~l~~~~-~~gKvvl 388 (392)
+.|+++++.+|++.+.+++ ..+|++|
T Consensus 315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 315 HRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 7899999999999999885 4589987
No 101
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=6.3e-33 Score=264.55 Aligned_cols=298 Identities=32% Similarity=0.520 Sum_probs=244.0
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||++++...+.+..+++. +.+.|.+.+++|+|++.++++|++|++...|.++. ...+|.++|||++|+|+++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~ 78 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG-LPPLPYVPGSDGAGVVEAVGEGVDG 78 (325)
T ss_pred CceEEEcccCCcccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC-CCCCCeecccceEEEEEeeCCCCCC
Confidence 689999877665667888 88999999999999999999999999988876542 2346789999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHh-cCCCCCCeEEEEcCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER-TGFSAGKSILVLNGS 242 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlI~Ga~ 242 (392)
|++||+|++..... ....|++++|+.++...++++|+++++++++.+++++.+||+++.. .++.+|++|+|+|++
T Consensus 79 ~~~Gd~v~~~~~~~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~ 154 (325)
T cd08253 79 LKVGDRVWLTNLGW----GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGS 154 (325)
T ss_pred CCCCCEEEEecccc----CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCC
Confidence 99999999875311 0125899999999999999999999999999999999999999864 889999999999999
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc------CCCCccEEEecCcc--HHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED------LPEKFDVVYDAIGQ--CDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~------~~~~~D~vid~~G~--~~~~~~~l 314 (392)
|++|++++++++. .|++++++++++++.+.++++|++++++....++.+ ..+++|+++||+|. .+..++++
T Consensus 155 ~~~g~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l 233 (325)
T cd08253 155 GAVGHAAVQLARW-AGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVL 233 (325)
T ss_pred chHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhh
Confidence 9999999999999 599999999989999999999999998876644321 13579999999884 57788999
Q ss_pred ccCCeEEEEcCCCCC----------CceEEEE----ee----cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHH
Q 016265 315 KEGGTVVALTGAVTP----------PGFRFVV----TS----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSY 376 (392)
Q Consensus 315 ~~~G~iv~~g~~~~~----------~~~~~~~----~~----~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~ 376 (392)
+++|+++.++..... ....+.. .. ..+.++.+.+++..+.+++. .++.|++++++++++.
T Consensus 234 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~ 311 (325)
T cd08253 234 APGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEA 311 (325)
T ss_pred CCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHH
Confidence 999999998763210 1111111 11 12345667778888888764 4678999999999999
Q ss_pred HHhCCCCeeEEEEe
Q 016265 377 IETNKATGKVVIHP 390 (392)
Q Consensus 377 l~~~~~~gKvvl~~ 390 (392)
+.++...||+++.+
T Consensus 312 ~~~~~~~~kvv~~~ 325 (325)
T cd08253 312 VESGGAIGKVVLDP 325 (325)
T ss_pred HHcCCCcceEEEeC
Confidence 99988889999864
No 102
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.1e-32 Score=262.15 Aligned_cols=290 Identities=32% Similarity=0.457 Sum_probs=239.3
Q ss_pred eEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
||+.+...+....+.+. +.+.+.+.++||+|++.++++|+.|++...|.++. .+|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~---~~~~~~g~e~~G~v~~~g~~~~~~ 76 (320)
T cd05286 1 KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEGAGVVEAVGPGVTGF 76 (320)
T ss_pred CeEEEecCCCccceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC---CCCccCCcceeEEEEEECCCCCCC
Confidence 46777666666567777 67777889999999999999999999998886542 457789999999999999999999
Q ss_pred CCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcCCC
Q 016265 165 KEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSG 243 (392)
Q Consensus 165 ~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~G 243 (392)
++||+|++.. ..|+|++|+.++.+.++++|+++++.+++.+++...++|+++. ..++.+|++|+|+|++|
T Consensus 77 ~~G~~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g 147 (320)
T cd05286 77 KVGDRVAYAG---------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAG 147 (320)
T ss_pred CCCCEEEEec---------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 9999999863 1489999999999999999999999999999999999999984 57899999999999999
Q ss_pred cHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCc--cHHHHHHhcc
Q 016265 244 GVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIG--QCDRAVKAIK 315 (392)
Q Consensus 244 ~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G--~~~~~~~~l~ 315 (392)
++|++++++|+.+ |+++++++.++++.+.++++|++++++..+..+.+ . .+++|++|||+| ..+.++++++
T Consensus 148 ~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~ 226 (320)
T cd05286 148 GVGLLLTQWAKAL-GATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLR 226 (320)
T ss_pred hHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhc
Confidence 9999999999995 99999999999999999999999998876544322 1 347999999987 3578899999
Q ss_pred cCCeEEEEcCCCCC-----------CceEEEE------eec----HHHHHHHHHHHHCCCcccccCCCcccchhhHHHHH
Q 016265 316 EGGTVVALTGAVTP-----------PGFRFVV------TSN----GEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAF 374 (392)
Q Consensus 316 ~~G~iv~~g~~~~~-----------~~~~~~~------~~~----~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~ 374 (392)
++|+++.+|..... ..+.+.. ... ...+.++++++.++.+.+. .++.|+++++.+||
T Consensus 227 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~ 304 (320)
T cd05286 227 PRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAH 304 (320)
T ss_pred cCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHH
Confidence 99999999754311 1112210 011 2345678889999988765 56789999999999
Q ss_pred HHHHhCCCCeeEEEEe
Q 016265 375 SYIETNKATGKVVIHP 390 (392)
Q Consensus 375 ~~l~~~~~~gKvvl~~ 390 (392)
+.+.++...+|++++|
T Consensus 305 ~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 305 RDLESRKTTGKLLLIP 320 (320)
T ss_pred HHHHcCCCCceEEEeC
Confidence 9999988889999875
No 103
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1e-32 Score=269.24 Aligned_cols=298 Identities=23% Similarity=0.301 Sum_probs=225.2
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCC-CCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|++|+. .+.. ++++ +.+.|.++++||+||+.++++|++|++.+.|.... ....+|.++|||++|+|+++|++++
T Consensus 19 ~~~~~~-~~~~---l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
T PLN02702 19 MAAWLV-GVNT---LKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93 (364)
T ss_pred ceEEEe-cCCc---eEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence 455554 3333 7777 78888899999999999999999999988763211 1123577899999999999999999
Q ss_pred CCCCCCEEEeccccc------c-------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHH
Q 016265 163 EFKEGDEVYGDINEK------A-------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYE 223 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~------~-------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~ 223 (392)
+|++||+|++..... + +......|+|++|+.++...++++|+++++++++.. ..+.++|+
T Consensus 94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~ 172 (364)
T PLN02702 94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVH 172 (364)
T ss_pred CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHH
Confidence 999999998732110 0 000112689999999999999999999999988752 23344888
Q ss_pred HHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCC--Ccccc--------
Q 016265 224 GLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTK--DNFED-------- 292 (392)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~--~~~~~-------- 292 (392)
++...++.+|++|+|+| +|++|++++|+|+.+ |++ +++++.+++|.++++++|++.++++.. .++.+
T Consensus 173 ~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T PLN02702 173 ACRRANIGPETNVLVMG-AGPIGLVTMLAARAF-GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKA 250 (364)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhh
Confidence 88778899999999996 899999999999994 986 455566888899999999998877532 22211
Q ss_pred CCCCccEEEecCc---cHHHHHHhcccCCeEEEEcCCCCCC----------ceEEE-EeecHHHHHHHHHHHHCCCcccc
Q 016265 293 LPEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTPP----------GFRFV-VTSNGEVLKKLNPYLESGKVKPI 358 (392)
Q Consensus 293 ~~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~~----------~~~~~-~~~~~~~~~~~~~~l~~g~l~~~ 358 (392)
..+++|++|||+| .+..++++++++|+++.+|...... .+... .......+++++++++++++.+.
T Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 330 (364)
T PLN02702 251 MGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVK 330 (364)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCch
Confidence 1347999999998 3689999999999999998532111 11111 11123567889999999998643
Q ss_pred cCCCcccc--hhhHHHHHHHHHhCCCCeeEEEE
Q 016265 359 IDPKGPFP--FSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 359 ~~~t~~~~--l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
..+++.|+ ++++++||+.+.+++..+|+++.
T Consensus 331 ~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 331 PLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 33456755 48999999999988888999985
No 104
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=5.6e-33 Score=272.99 Aligned_cols=300 Identities=27% Similarity=0.348 Sum_probs=230.2
Q ss_pred CCcceeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCC-----CCCCCCCCcCCCceeEEE
Q 016265 80 VPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK-----ATDSPLPTVPGYDVAGVV 154 (392)
Q Consensus 80 ~p~~mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-----~~~~~~p~v~G~e~~G~V 154 (392)
+-+.+.+.++... . ++++ +.+.|+++++||+||+.++++|++|++.+.+... .....+|.++|||++|+|
T Consensus 25 ~~~~~~~~~~~~~-~---~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 99 (384)
T cd08265 25 KLTNLGSKVWRYP-E---LRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVV 99 (384)
T ss_pred hhccceeEEEeCC-C---EEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEE
Confidence 3455666666642 2 7888 8999999999999999999999999998764210 011346789999999999
Q ss_pred EEeCCCCCCCCCCCEEEecccccc------c------------CCCCCCCcceeEEEecCCceeeCCCC-------CCHH
Q 016265 155 VKVGTQVKEFKEGDEVYGDINEKA------L------------EGPKQFGSLAEYTAVEERLLAPKPKN-------LDFV 209 (392)
Q Consensus 155 ~~vG~~v~~~~vGdrV~~~~~~~~------~------------~~~~~~G~~a~~~~v~~~~~~~iP~~-------l~~~ 209 (392)
+++|+++..|++||+|++.....+ . .|...+|+|++|+.++...++++|++ ++++
T Consensus 100 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~ 179 (384)
T cd08265 100 EKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE 179 (384)
T ss_pred EEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH
Confidence 999999999999999986322111 0 01223699999999999999999986 3455
Q ss_pred hHhccchhHHHHHHHHH-h-cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCcEEEeCC
Q 016265 210 QAAGLPLAIETAYEGLE-R-TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGADLAIDYT 286 (392)
Q Consensus 210 ~aa~l~~~~~ta~~al~-~-~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~~vi~~~ 286 (392)
++.++.++.+||+++. . .++++|++|+|+| +|++|++++|+|+.+ |+ ++++++.+++|.++++++|++++++++
T Consensus 180 -~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~ 256 (384)
T cd08265 180 -AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPT 256 (384)
T ss_pred -HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEccc
Confidence 5566778889999984 3 6899999999995 899999999999994 98 677888888899999999999999876
Q ss_pred CC---cccc----C--CCCccEEEecCcc----HHHHHHhcccCCeEEEEcCCCCCCce---------EEEEe----ecH
Q 016265 287 KD---NFED----L--PEKFDVVYDAIGQ----CDRAVKAIKEGGTVVALTGAVTPPGF---------RFVVT----SNG 340 (392)
Q Consensus 287 ~~---~~~~----~--~~~~D~vid~~G~----~~~~~~~l~~~G~iv~~g~~~~~~~~---------~~~~~----~~~ 340 (392)
+. ++.+ . .+++|+++|++|. +..++++++++|+++.+|.......+ ..+.. ...
T Consensus 257 ~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 336 (384)
T cd08265 257 KMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGH 336 (384)
T ss_pred ccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCc
Confidence 43 2211 1 3579999999983 47889999999999999754311110 01111 123
Q ss_pred HHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 341 EVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 341 ~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
..+.++++++++|.+++...+++.|+++++++||+.+.++ ..||+|+
T Consensus 337 ~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 337 GIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred chHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 4688999999999998754456889999999999997665 5688875
No 105
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.3e-32 Score=267.29 Aligned_cols=297 Identities=34% Similarity=0.510 Sum_probs=230.3
Q ss_pred eEEEEcccCCcceEEEeccccCCC-CCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC-
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQ-VKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK- 162 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~- 162 (392)
|++++.+++.+..++.. +.+.|. ++++||+||+.++++|++|+..+.+... .....|.++|||++|+|+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~vG~~v~~ 79 (352)
T cd08247 2 KALTFKNNTSPLTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF-HFKVKEKGLGRDYSGVIVKVGSNVAS 79 (352)
T ss_pred ceEEEecCCCcceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc-ccccCCCccCceeEEEEEEeCccccc
Confidence 68999888877545544 444443 3999999999999999999988754321 1112367899999999999999998
Q ss_pred CCCCCCEEEecccccccCCCCCCCcceeEEEecCC----ceeeCCCCCCHHhHhccchhHHHHHHHHHhc--CCCCCCeE
Q 016265 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEER----LLAPKPKNLDFVQAAGLPLAIETAYEGLERT--GFSAGKSI 236 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~----~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~--~~~~g~~V 236 (392)
.|++||+|++.....+ ...|+|++|++++.. .++++|+++++++++.+++++.|||+++... .+++|++|
T Consensus 80 ~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~v 155 (352)
T cd08247 80 EWKVGDEVCGIYPHPY----GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKV 155 (352)
T ss_pred CCCCCCEEEEeecCCC----CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeE
Confidence 8999999998653221 136899999999987 7899999999999999999999999999765 69999999
Q ss_pred EEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCc---c-cc----C--CCCccEEEecCcc
Q 016265 237 LVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDN---F-ED----L--PEKFDVVYDAIGQ 306 (392)
Q Consensus 237 lI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~---~-~~----~--~~~~D~vid~~G~ 306 (392)
+|+|++|++|++++|+|+.++|.++++++.++++.+.++++|+++++++++.+ + .+ . .+++|++|||+|.
T Consensus 156 lI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~ 235 (352)
T cd08247 156 LVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGG 235 (352)
T ss_pred EEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCC
Confidence 99999899999999999984344344444556666788999999999876544 2 11 1 4589999999884
Q ss_pred ---HHHHHHhcc---cCCeEEEEcCCC----CC-------------Cce---------EEE---EeecHHHHHHHHHHHH
Q 016265 307 ---CDRAVKAIK---EGGTVVALTGAV----TP-------------PGF---------RFV---VTSNGEVLKKLNPYLE 351 (392)
Q Consensus 307 ---~~~~~~~l~---~~G~iv~~g~~~----~~-------------~~~---------~~~---~~~~~~~~~~~~~~l~ 351 (392)
...++++++ ++|+++.+++.. .. ..+ .+. .......+.++++++.
T Consensus 236 ~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (352)
T cd08247 236 YDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIA 315 (352)
T ss_pred HHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHh
Confidence 468899999 999999875321 00 000 000 0111356788999999
Q ss_pred CCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEEE
Q 016265 352 SGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 389 (392)
Q Consensus 352 ~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~ 389 (392)
++.+++. +++.|+++++++||+.+++++..||++++
T Consensus 316 ~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 316 DGKVKPP--IDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred CCCeEee--eccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 9998765 46789999999999999999888999985
No 106
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.1e-32 Score=262.56 Aligned_cols=291 Identities=35% Similarity=0.547 Sum_probs=239.9
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||++++.+.+....+++. +.+.|.+.++||+||+.++++|+.|++.+.|.++. ...+|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vg~~~~~ 78 (323)
T cd05276 1 MKAIVIKEPGGPEVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP-PPGASDILGLEVAGVVVAVGPGVTG 78 (323)
T ss_pred CeEEEEecCCCcccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC-CCCCCCcccceeEEEEEeeCCCCCC
Confidence 799999987776667887 77878889999999999999999999988876542 3346789999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGS 242 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~ 242 (392)
+++||+|++... +|+|++|+.++...++++|+++++.+++.++.++.++|+++. ...+.+|++|+|+|+.
T Consensus 79 ~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~ 149 (323)
T cd05276 79 WKVGDRVCALLA---------GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGA 149 (323)
T ss_pred CCCCCEEEEecC---------CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCc
Confidence 999999998632 489999999999999999999999999999999999999985 4678999999999999
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCcc--HHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIGQ--CDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G~--~~~~~~~l 314 (392)
|++|++++++++. .|++++++++++++++.++++|++.+++.....+.+ . .+++|++||++|. ...+++++
T Consensus 150 ~~ig~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~ 228 (323)
T cd05276 150 SGVGTAAIQLAKA-LGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRAL 228 (323)
T ss_pred ChHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhh
Confidence 9999999999999 599998888888899999999998888876544322 1 3579999999983 57889999
Q ss_pred ccCCeEEEEcCCCC---C--------CceEEEE---ee---------cHHHHHHHHHHHHCCCcccccCCCcccchhhHH
Q 016265 315 KEGGTVVALTGAVT---P--------PGFRFVV---TS---------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVV 371 (392)
Q Consensus 315 ~~~G~iv~~g~~~~---~--------~~~~~~~---~~---------~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~ 371 (392)
+++|+++.++.... . ....+.. .. ....+.++++++.++++++. .++.|++++++
T Consensus 229 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 306 (323)
T cd05276 229 APDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEAA 306 (323)
T ss_pred ccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHH
Confidence 99999999875321 0 1111110 00 11345677888989988754 56789999999
Q ss_pred HHHHHHHhCCCCeeEEE
Q 016265 372 EAFSYIETNKATGKVVI 388 (392)
Q Consensus 372 ~A~~~l~~~~~~gKvvl 388 (392)
+|++.+.++...||+++
T Consensus 307 ~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 307 EAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHhCCCcceEeC
Confidence 99999998888888874
No 107
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=9.5e-33 Score=265.58 Aligned_cols=294 Identities=30% Similarity=0.421 Sum_probs=238.4
Q ss_pred eEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
||++++++|.. ++++ +.+.|.+.+++|+|++.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++++
T Consensus 1 ~~~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~v~~~g~~~~~~ 75 (330)
T cd08245 1 KAAVVHAAGGP--LEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG--GSKYPLVPGHEIVGEVVEVGAGVEGR 75 (330)
T ss_pred CeEEEecCCCC--ceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC--CCCCCcccCccceEEEEEECCCCccc
Confidence 67888887543 7888 8899999999999999999999999999988763 23467899999999999999999999
Q ss_pred CCCCEEEecc-----ccc--c------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH
Q 016265 165 KEGDEVYGDI-----NEK--A------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL 225 (392)
Q Consensus 165 ~vGdrV~~~~-----~~~--~------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al 225 (392)
++||+|+... +.+ . ..+....|+|++|+.++.+.++++|+++++++++.+++.+.|||+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l 155 (330)
T cd08245 76 KVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSAL 155 (330)
T ss_pred ccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence 9999998421 100 0 00112368999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc-cCCCCccEEEecC
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE-DLPEKFDVVYDAI 304 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~-~~~~~~D~vid~~ 304 (392)
+..++++|++|+|+| +|++|++++++|+. .|.+++++++++++.+.++++|++.+++....... ...+++|++||++
T Consensus 156 ~~~~~~~~~~vlI~g-~g~iG~~~~~~a~~-~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (330)
T cd08245 156 RDAGPRPGERVAVLG-IGGLGHLAVQYARA-MGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTV 233 (330)
T ss_pred HhhCCCCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEECC
Confidence 878899999999996 78899999999999 59999999999999999999999988886554322 1235799999997
Q ss_pred c---cHHHHHHhcccCCeEEEEcCCCCCC-c---eEE---------EEeecHHHHHHHHHHHHCCCcccccCCCcccchh
Q 016265 305 G---QCDRAVKAIKEGGTVVALTGAVTPP-G---FRF---------VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFS 368 (392)
Q Consensus 305 G---~~~~~~~~l~~~G~iv~~g~~~~~~-~---~~~---------~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~ 368 (392)
+ ....++++++++|+++.++...... . ..+ ........++++++++.++.+++ ..+.|+++
T Consensus 234 ~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~---~~~~~~~~ 310 (330)
T cd08245 234 VSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKP---MIETFPLD 310 (330)
T ss_pred CcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcc---eEEEEcHH
Confidence 6 3578999999999999997542110 0 001 01113567888999999999875 34689999
Q ss_pred hHHHHHHHHHhCCCCeeEEE
Q 016265 369 QVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 369 ~~~~A~~~l~~~~~~gKvvl 388 (392)
++++||+.+.+++..||+|+
T Consensus 311 ~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 311 QANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHcCCCCcceeC
Confidence 99999999999988899875
No 108
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.8e-32 Score=261.16 Aligned_cols=277 Identities=25% Similarity=0.298 Sum_probs=223.6
Q ss_pred eEEEeccccCCCCCCCeEEEEEeEEecChHhHHhh-cCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEeccc
Q 016265 97 VLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRR-QGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDIN 175 (392)
Q Consensus 97 ~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~ 175 (392)
.++++ +.+.|++.++||+|++.++++|+.|++.+ .|..+.....+|.++|||++|+|+++|++++++++||+|++..
T Consensus 6 ~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 83 (312)
T cd08269 6 RFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS- 83 (312)
T ss_pred eeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 47888 89999999999999999999999999987 7754322223477899999999999999999999999999864
Q ss_pred ccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHH
Q 016265 176 EKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQ 255 (392)
Q Consensus 176 ~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~ 255 (392)
.|+|++|+.++++.++++|+++ ..++....++.++++++...++++|++|+|+| +|++|++++|+|+.
T Consensus 84 ---------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~la~~ 151 (312)
T cd08269 84 ---------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIG-AGFIGLLFLQLAAA 151 (312)
T ss_pred ---------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH
Confidence 4899999999999999999998 22222236778899999888899999999996 79999999999999
Q ss_pred hcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCc---cHHHHHHhcccCCeEEEEcC
Q 016265 256 VFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIG---QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 256 ~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~ 325 (392)
+ |++ ++++.+++++.++++++|++++++.....+.+ . ..++|++|||+| ..+.++++++++|+++.+|.
T Consensus 152 ~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~ 230 (312)
T cd08269 152 A-GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGY 230 (312)
T ss_pred c-CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEcc
Confidence 4 998 88888888899999999999988865544322 1 357999999987 35889999999999999975
Q ss_pred CCC-CC----------ceEEE--E----eecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCC-CeeEE
Q 016265 326 AVT-PP----------GFRFV--V----TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKA-TGKVV 387 (392)
Q Consensus 326 ~~~-~~----------~~~~~--~----~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~-~gKvv 387 (392)
... +. ...+. . ....+.+++++++++++.+++....++.|+++++++|++.+.+++. .+|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 310 (312)
T cd08269 231 HQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGV 310 (312)
T ss_pred CCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEE
Confidence 431 11 11111 1 1123678899999999999875435678999999999999999865 58988
Q ss_pred E
Q 016265 388 I 388 (392)
Q Consensus 388 l 388 (392)
+
T Consensus 311 ~ 311 (312)
T cd08269 311 I 311 (312)
T ss_pred e
Confidence 6
No 109
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1e-32 Score=266.66 Aligned_cols=293 Identities=25% Similarity=0.318 Sum_probs=225.9
Q ss_pred cccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCC-CCCCCCCCcCCCceeEEEEEeCCCCCCCCCCC
Q 016265 90 GEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFK-ATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGD 168 (392)
Q Consensus 90 ~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGd 168 (392)
++++.. ++++ +.+.|.|+++||+||+.++++|+.|+..+.+... .....+|.++|||++|+|+++|++++++++||
T Consensus 5 ~~~~~~--~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 81 (340)
T TIGR00692 5 TKPGYG--AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD 81 (340)
T ss_pred ccCCCC--cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCC
Confidence 345544 7777 8899999999999999999999999988765421 11233567899999999999999999999999
Q ss_pred EEEecccccc------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCC
Q 016265 169 EVYGDINEKA------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGF 230 (392)
Q Consensus 169 rV~~~~~~~~------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~ 230 (392)
+|++.....+ ..+....|+|++|++++.+.++++|++++++++ +++.++.++++++ ....
T Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~-~~~~ 159 (340)
T TIGR00692 82 YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV-LAGP 159 (340)
T ss_pred EEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH-HccC
Confidence 9987421100 001113689999999999999999999998654 5677788899887 3457
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEec
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDA 303 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~ 303 (392)
++|++|+|.| +|++|.+++|+|+.+ |++ ++++..++++.+.++++|++.++++...++.+ . .+++|++|||
T Consensus 160 ~~g~~vlI~~-~g~vg~~a~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~ 237 (340)
T TIGR00692 160 ISGKSVLVTG-AGPIGLMAIAVAKAS-GAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEM 237 (340)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEEC
Confidence 7999999976 799999999999995 997 66666788889999999999999886654422 1 3579999999
Q ss_pred Ccc---HHHHHHhcccCCeEEEEcCCCCCCc-----------eEEEE---eecHHHHHHHHHHHHCCCcccccCCCcccc
Q 016265 304 IGQ---CDRAVKAIKEGGTVVALTGAVTPPG-----------FRFVV---TSNGEVLKKLNPYLESGKVKPIIDPKGPFP 366 (392)
Q Consensus 304 ~G~---~~~~~~~l~~~G~iv~~g~~~~~~~-----------~~~~~---~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~ 366 (392)
+|. +..++++++++|+++.+|....... +.+.. ....+.+.++++++++|+++....+++.|+
T Consensus 238 ~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 317 (340)
T TIGR00692 238 SGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFK 317 (340)
T ss_pred CCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeee
Confidence 873 5788999999999999985421100 11110 112345788999999999974333568899
Q ss_pred hhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 367 FSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 367 l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
++++.++++.+.+++. ||+|+.+
T Consensus 318 l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 318 FDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred HHHHHHHHHHHhcCCC-ceEEEeC
Confidence 9999999999998874 9999874
No 110
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=4.6e-33 Score=251.15 Aligned_cols=276 Identities=26% Similarity=0.355 Sum_probs=220.1
Q ss_pred ceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCC-CCCCCcCCCceeEEEEEeC--CCCCCCCCCCEEEe
Q 016265 96 DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATD-SPLPTVPGYDVAGVVVKVG--TQVKEFKEGDEVYG 172 (392)
Q Consensus 96 ~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-~~~p~v~G~e~~G~V~~vG--~~v~~~~vGdrV~~ 172 (392)
+.++++ +.++|+|++||||||+.|.+++|.- +|.+...+ .-.|.-+|-..+|-++... |+..+|++||.|..
T Consensus 25 d~F~le-e~~vp~p~~GqvLl~~~ylS~DPym----Rgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~ 99 (340)
T COG2130 25 DDFRLE-EVDVPEPGEGQVLLRTLYLSLDPYM----RGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG 99 (340)
T ss_pred CCceeE-eccCCCCCcCceEEEEEEeccCHHH----eecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence 458888 8999999999999999999999954 33332221 2235667766654443332 56789999999998
Q ss_pred cccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHh--HhccchhHHHHHHHHH-hcCCCCCCeEEEEcCCCcHHHHH
Q 016265 173 DINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQ--AAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLV 249 (392)
Q Consensus 173 ~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~--aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~G~vG~~a 249 (392)
. .+|+||..++.+.+.++.+..-+.. ...+.++..|||.+|. .++.++||+|+|.+|+|++|..+
T Consensus 100 ~------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvv 167 (340)
T COG2130 100 V------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVV 167 (340)
T ss_pred c------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHH
Confidence 5 5799999999999999975432222 2235778899999995 57899999999999999999999
Q ss_pred HHHHHHhcCCeEEEEeCCcccHHHHHh-cCCcEEEeCCCCcccc-----CCCCccEEEecCc--cHHHHHHhcccCCeEE
Q 016265 250 IQLAKQVFGASRVAATSSTRNLEFLKS-LGADLAIDYTKDNFED-----LPEKFDVVYDAIG--QCDRAVKAIKEGGTVV 321 (392)
Q Consensus 250 iqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~~vi~~~~~~~~~-----~~~~~D~vid~~G--~~~~~~~~l~~~G~iv 321 (392)
.|+||. .|++||.+..+++|.+++++ +|.|.+|||+.+++.+ .++|+|+.||++| .++..+..|+..+|++
T Consensus 168 gQiAKl-kG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~ 246 (340)
T COG2130 168 GQIAKL-KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIP 246 (340)
T ss_pred HHHHHh-hCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhcccccee
Confidence 999998 59999999999999999987 9999999999998754 3779999999999 4799999999999999
Q ss_pred EEcCCC------CC---CceE-----------EEE-e---e-cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHH
Q 016265 322 ALTGAV------TP---PGFR-----------FVV-T---S-NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSY 376 (392)
Q Consensus 322 ~~g~~~------~~---~~~~-----------~~~-~---~-~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~ 376 (392)
.+|.-. .+ ..+. |+. . . -++.++++..|+++|+|+.... -.-.|+.+++||..
T Consensus 247 ~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~et--i~dGlEnaP~Af~g 324 (340)
T COG2130 247 VCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRET--IVDGLENAPEAFIG 324 (340)
T ss_pred eeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEee--ehhhhhccHHHHHH
Confidence 997432 11 1111 111 1 1 1366789999999999998753 45679999999999
Q ss_pred HHhCCCCeeEEEEeC
Q 016265 377 IETNKATGKVVIHPI 391 (392)
Q Consensus 377 l~~~~~~gKvvl~~~ 391 (392)
|.+|+..||.|++..
T Consensus 325 Ll~G~N~GK~vvKv~ 339 (340)
T COG2130 325 LLSGKNFGKLVVKVA 339 (340)
T ss_pred HhcCCccceEEEEec
Confidence 999999999999864
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-31 Score=256.51 Aligned_cols=294 Identities=36% Similarity=0.535 Sum_probs=238.8
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++.+++..+.++++ +.+.|.+.+++|+||+.++++|++|++...|.+.. ..+|.++|||++|+|+.+|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~ 77 (325)
T cd08271 1 MKAWVLPKPGAALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA--WSYPHVPGVDGAGVVVAVGAKVTG 77 (325)
T ss_pred CeeEEEccCCCcceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCcccccceEEEEEEeCCCCCc
Confidence 799999988843348888 89999999999999999999999999988776432 223678999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGS 242 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~ 242 (392)
+++||+|++.... ...|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++. ...+++|++|+|+|++
T Consensus 78 ~~~Gd~V~~~~~~------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~ 151 (325)
T cd08271 78 WKVGDRVAYHASL------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGA 151 (325)
T ss_pred CCCCCEEEeccCC------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCc
Confidence 9999999986421 12589999999999999999999999999999999999999985 4788999999999988
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc------CCCCccEEEecCcc--HHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED------LPEKFDVVYDAIGQ--CDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~------~~~~~D~vid~~G~--~~~~~~~l 314 (392)
|++|++++++|+. .|++++++. ++++.+.++++|++.+++.....+.+ ..+++|++++++|. ...+++++
T Consensus 152 ~~ig~~~~~~a~~-~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l 229 (325)
T cd08271 152 GGVGSFAVQLAKR-AGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTL 229 (325)
T ss_pred cHHHHHHHHHHHH-cCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhh
Confidence 9999999999999 599988776 66788888899999998876544322 13579999999883 46789999
Q ss_pred ccCCeEEEEcCCCCC-------CceEEE---E------e------ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHH
Q 016265 315 KEGGTVVALTGAVTP-------PGFRFV---V------T------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVE 372 (392)
Q Consensus 315 ~~~G~iv~~g~~~~~-------~~~~~~---~------~------~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~ 372 (392)
+++|+++.++..... ..+.+. + . ...+.+.+++++++++.+++. .++.|+++++.+
T Consensus 230 ~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~ 307 (325)
T cd08271 230 AFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPE 307 (325)
T ss_pred ccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHH
Confidence 999999988643211 011110 0 0 012345778889999998764 467899999999
Q ss_pred HHHHHHhCCCCeeEEEEe
Q 016265 373 AFSYIETNKATGKVVIHP 390 (392)
Q Consensus 373 A~~~l~~~~~~gKvvl~~ 390 (392)
+++.+.++...+|+++++
T Consensus 308 a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 308 ALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHHHHcCCccceEEEEC
Confidence 999999888889998864
No 112
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=1.1e-31 Score=257.78 Aligned_cols=287 Identities=26% Similarity=0.329 Sum_probs=227.7
Q ss_pred eeEEEEcccC----CcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCC-CCCCCCCcCCCceeEEEEEeC
Q 016265 84 MKAWLYGEYG----GVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTVPGYDVAGVVVKVG 158 (392)
Q Consensus 84 mka~v~~~~~----~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~v~G~e~~G~V~~vG 158 (392)
.|||+++..+ .++.++++ +.+.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G 80 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESR 80 (329)
T ss_pred CcEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecC
Confidence 3677776554 44678888 89999999999999999999999887655543211 111234678999999999999
Q ss_pred CCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecC-CceeeCCCCCC--HHhHhc-cchhHHHHHHHHH-hcCCCCC
Q 016265 159 TQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEE-RLLAPKPKNLD--FVQAAG-LPLAIETAYEGLE-RTGFSAG 233 (392)
Q Consensus 159 ~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~-~~~~~iP~~l~--~~~aa~-l~~~~~ta~~al~-~~~~~~g 233 (392)
++ ++++||+|++. ++|++|+.++. +.++++|++++ +.+++. +++++.|||+++. ...+.+|
T Consensus 81 ~~--~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~ 146 (329)
T cd05288 81 SP--DFKVGDLVSGF------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPG 146 (329)
T ss_pred CC--CCCCCCEEecc------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCC
Confidence 64 79999999973 58999999999 99999999995 555555 8889999999985 4678999
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cCCcEEEeCCCCcccc-----CCCCccEEEecCc--
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LGADLAIDYTKDNFED-----LPEKFDVVYDAIG-- 305 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~~vi~~~~~~~~~-----~~~~~D~vid~~G-- 305 (392)
++|+|+|++|++|++++|+|+. .|++++++++++++.+.+++ +|+++++++++.++.+ ..+++|++|||+|
T Consensus 147 ~~vlI~g~~g~ig~~~~~~a~~-~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~ 225 (329)
T cd05288 147 ETVVVSAAAGAVGSVVGQIAKL-LGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE 225 (329)
T ss_pred CEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH
Confidence 9999999999999999999999 59999999999999999988 9999999987654322 1357999999998
Q ss_pred cHHHHHHhcccCCeEEEEcCCCCCC----------------ceEEEE---eec----HHHHHHHHHHHHCCCcccccCCC
Q 016265 306 QCDRAVKAIKEGGTVVALTGAVTPP----------------GFRFVV---TSN----GEVLKKLNPYLESGKVKPIIDPK 362 (392)
Q Consensus 306 ~~~~~~~~l~~~G~iv~~g~~~~~~----------------~~~~~~---~~~----~~~~~~~~~~l~~g~l~~~~~~t 362 (392)
.++.++++++++|+++.+|...... ...+.. ... .+.+.++++++.+|.+++.. .
T Consensus 226 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~ 303 (329)
T cd05288 226 ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--D 303 (329)
T ss_pred HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--c
Confidence 4688999999999999987543110 111111 011 24578889999999988753 3
Q ss_pred cccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 363 GPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 363 ~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
..++++++.++++.+.+++..||+++
T Consensus 304 ~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 304 VVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred ccccHHHHHHHHHHHhcCCCccceeC
Confidence 56899999999999998888888874
No 113
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=9.2e-32 Score=254.38 Aligned_cols=272 Identities=31% Similarity=0.533 Sum_probs=227.3
Q ss_pred CCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEecccccccCCCCCC
Q 016265 106 VPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQF 185 (392)
Q Consensus 106 ~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~ 185 (392)
.|.+.+++|+||+.++++|+.|++.+.|.++. ...+|.++|||++|+|+++|+++.++++||+|++... ...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------~~~ 73 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT-MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-------ESM 73 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC-CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-------CCC
Confidence 56789999999999999999999999887642 2356889999999999999999999999999998642 135
Q ss_pred CcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEe
Q 016265 186 GSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAAT 265 (392)
Q Consensus 186 G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~ 265 (392)
|+|++|+.++.+.++++|+++++++++.+++++.+||++++...+++|++|+|+|++|++|++++|+|+.+ |+++++++
T Consensus 74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~-g~~v~~~~ 152 (303)
T cd08251 74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATA 152 (303)
T ss_pred cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEc
Confidence 89999999999999999999999999999999999999998889999999999999999999999999995 99999999
Q ss_pred CCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCc--cHHHHHHhcccCCeEEEEcCCCCC--C-----
Q 016265 266 SSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVTP--P----- 330 (392)
Q Consensus 266 ~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G--~~~~~~~~l~~~G~iv~~g~~~~~--~----- 330 (392)
+++++++.++++|++.+++....++.+ . .+++|+++|+++ ....++++++++|+++.++..... .
T Consensus 153 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 232 (303)
T cd08251 153 SSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS 232 (303)
T ss_pred CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh
Confidence 988999999999999999877654322 1 357999999987 357889999999999998654311 0
Q ss_pred ----ceEEE-Ee------e----cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 331 ----GFRFV-VT------S----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 331 ----~~~~~-~~------~----~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
...+. .. . ..+.+.++.+++.+|.+++. .++.|++++++++++.+.+++..||+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 233 VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 11111 10 0 12346778889999988754 5688999999999999999888888874
No 114
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-31 Score=255.04 Aligned_cols=290 Identities=42% Similarity=0.667 Sum_probs=230.5
Q ss_pred EEcccCCcceE--EEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCC-CCCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 88 LYGEYGGVDVL--KFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT-DSPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 88 v~~~~~~~~~l--~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
+++..++.+.+ +++ +.+.|.++++||+|++.++++|++|++.+.|.++.. ...+|..+|||++|+|+++|+++.++
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~ 80 (319)
T cd08267 2 VYTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF 80 (319)
T ss_pred eeCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCC
Confidence 34555555444 777 788999999999999999999999999888765211 12346789999999999999999999
Q ss_pred CCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhc-CCCCCCeEEEEcCCC
Q 016265 165 KEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERT-GFSAGKSILVLNGSG 243 (392)
Q Consensus 165 ~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~-~~~~g~~VlI~Ga~G 243 (392)
++||+|++.... ...|+|++|+.++.+.++++|+++++++++.+++++.+||+++... .+++|++|+|+|++|
T Consensus 81 ~~Gd~V~~~~~~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g 154 (319)
T cd08267 81 KVGDEVFGRLPP------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASG 154 (319)
T ss_pred CCCCEEEEeccC------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 999999986421 1258999999999999999999999999999999999999999654 589999999999889
Q ss_pred cHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc---cCCCCccEEEecCcc--H--HHHHHhccc
Q 016265 244 GVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE---DLPEKFDVVYDAIGQ--C--DRAVKAIKE 316 (392)
Q Consensus 244 ~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~---~~~~~~D~vid~~G~--~--~~~~~~l~~ 316 (392)
++|++++++|+. .|+++++++.+ ++.+.++++|++++++.....+. ...+++|+++||+|. . ...+..+++
T Consensus 155 ~~g~~~~~la~~-~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~ 232 (319)
T cd08267 155 GVGTFAVQIAKA-LGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKP 232 (319)
T ss_pred HHHHHHHHHHHH-cCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCC
Confidence 999999999999 49998887765 88888999999888887654442 223579999999983 2 233334999
Q ss_pred CCeEEEEcCCCCCC--c--------------eEE-EEeecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHh
Q 016265 317 GGTVVALTGAVTPP--G--------------FRF-VVTSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIET 379 (392)
Q Consensus 317 ~G~iv~~g~~~~~~--~--------------~~~-~~~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~ 379 (392)
+|+++.+|...... . +.. ......+.+.+++++++++++++. +++.|+++++++||+.+.+
T Consensus 233 ~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~a~~~~~~ 310 (319)
T cd08267 233 GGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPV--IDSVYPLEDAPEAYRRLKS 310 (319)
T ss_pred CCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeee--eeeEEcHHHHHHHHHHHhc
Confidence 99999997543110 0 000 111136778999999999998764 5688999999999999998
Q ss_pred CCCCeeEEE
Q 016265 380 NKATGKVVI 388 (392)
Q Consensus 380 ~~~~gKvvl 388 (392)
++..+|+++
T Consensus 311 ~~~~~~vvv 319 (319)
T cd08267 311 GRARGKVVI 319 (319)
T ss_pred CCCCCcEeC
Confidence 887788874
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.3e-31 Score=252.44 Aligned_cols=298 Identities=33% Similarity=0.526 Sum_probs=240.6
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||++++...+....+++. +.+.|.+++++++|++.++++|+.|+....|.+... ..+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~ 78 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVTG 78 (328)
T ss_pred CeEEEEeccCCcceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCCc
Confidence 689999877766667887 778788999999999999999999998887765422 345788999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGS 242 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~ 242 (392)
+++||+|++.... .....|++++|+.++.+.++++|+++++++++.+++++.++|+++. ...+.++++|+|+|++
T Consensus 79 ~~~Gd~V~~~~~~----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~ 154 (328)
T cd08268 79 FAVGDRVSVIPAA----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAAS 154 (328)
T ss_pred CCCCCEEEecccc----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence 9999999986421 1123589999999999999999999999999999999999999985 5788899999999989
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCc--cHHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIG--QCDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G--~~~~~~~~l 314 (392)
|++|++++++++. .|++++.++.++++++.++++|.+.+++.....+.+ . .+++|++++++| ....+++++
T Consensus 155 ~~~g~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l 233 (328)
T cd08268 155 SSVGLAAIQIANA-AGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADAL 233 (328)
T ss_pred cHHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhh
Confidence 9999999999999 599999999888899999999998888876544322 1 347999999988 357889999
Q ss_pred ccCCeEEEEcCCCCC-----------CceEEEEe------e----cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHH
Q 016265 315 KEGGTVVALTGAVTP-----------PGFRFVVT------S----NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEA 373 (392)
Q Consensus 315 ~~~G~iv~~g~~~~~-----------~~~~~~~~------~----~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A 373 (392)
+++|+++.++..... .+..+... . ....++.+.+++.++.+.+. .++.|+++++.++
T Consensus 234 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 311 (328)
T cd08268 234 APGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEA 311 (328)
T ss_pred ccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHH
Confidence 999999998743210 11111110 1 12345566677778887764 4678999999999
Q ss_pred HHHHHhCCCCeeEEEEe
Q 016265 374 FSYIETNKATGKVVIHP 390 (392)
Q Consensus 374 ~~~l~~~~~~gKvvl~~ 390 (392)
++.+.++...+|+++++
T Consensus 312 ~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 312 HRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHHHcCCCCceEEEeC
Confidence 99999888889999864
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=4.6e-31 Score=251.89 Aligned_cols=292 Identities=34% Similarity=0.540 Sum_probs=239.1
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
|||+++...+....+++. +.+.|.+++++++|++.++++|+.|++...+.++.. ..+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vg~~~~~ 78 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP-PGASDILGLEVAGEVVAVGEGVSR 78 (325)
T ss_pred CceEEEccCCCcccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCCCCccceeEEEEEEeCCCCCC
Confidence 689998877766667777 677777899999999999999999999888765422 335789999999999999999999
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGS 242 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~ 242 (392)
+++||+|++... +|+|++|+.++...++++|+++++.+++.+++++.|+|+++ +...+++|++|+|+|++
T Consensus 79 ~~~Gd~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~ 149 (325)
T TIGR02824 79 WKVGDRVCALVA---------GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGA 149 (325)
T ss_pred CCCCCEEEEccC---------CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCc
Confidence 999999998632 48999999999999999999999999999999999999987 56789999999999999
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc------CCCCccEEEecCc--cHHHHHHhc
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED------LPEKFDVVYDAIG--QCDRAVKAI 314 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~------~~~~~D~vid~~G--~~~~~~~~l 314 (392)
|++|++++++++. .|++++++.+++++.+.++++|++.+++.....+.+ ..+++|++++++| ....+++++
T Consensus 150 ~~~g~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l 228 (325)
T TIGR02824 150 SGIGTTAIQLAKA-FGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKAL 228 (325)
T ss_pred chHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhh
Confidence 9999999999999 599999998888888888999998888766543321 1347999999988 357889999
Q ss_pred ccCCeEEEEcCCCC-----------CCceEEEE---ee---------cHHHHHHHHHHHHCCCcccccCCCcccchhhHH
Q 016265 315 KEGGTVVALTGAVT-----------PPGFRFVV---TS---------NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVV 371 (392)
Q Consensus 315 ~~~G~iv~~g~~~~-----------~~~~~~~~---~~---------~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~ 371 (392)
+++|+++.++.... ..+..+.. .. ....+.+++++++++.+++. +++.|+++++.
T Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~ 306 (325)
T TIGR02824 229 ALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAA 306 (325)
T ss_pred ccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHH
Confidence 99999999875331 11111111 00 12235667888999988754 56789999999
Q ss_pred HHHHHHHhCCCCeeEEEE
Q 016265 372 EAFSYIETNKATGKVVIH 389 (392)
Q Consensus 372 ~A~~~l~~~~~~gKvvl~ 389 (392)
++++.+.++...||+++.
T Consensus 307 ~~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 307 QAHALMESGDHIGKIVLT 324 (325)
T ss_pred HHHHHHHhCCCcceEEEe
Confidence 999999988888999875
No 117
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.4e-30 Score=248.66 Aligned_cols=291 Identities=35% Similarity=0.530 Sum_probs=231.2
Q ss_pred eEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 85 KAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 85 ka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
||+++...+....+++. +.+.|.+.+++|+||+.++++|+.|++...|.++. ....|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~~ 78 (337)
T cd08275 1 RAVVLTGFGGLDKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS-APKPPFVPGFECAGTVEAVGEGVKDF 78 (337)
T ss_pred CeEEEcCCCCccceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCcceeEEEEEEECCCCcCC
Confidence 46777666655557777 67778899999999999999999999988876532 23457789999999999999999999
Q ss_pred CCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcCCC
Q 016265 165 KEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSG 243 (392)
Q Consensus 165 ~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~G 243 (392)
++||+|++... .|+|++|+.++.+.++++|+++++++++.+++++.++|+++. ...+++|++|+|+|+.|
T Consensus 79 ~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g 149 (337)
T cd08275 79 KVGDRVMGLTR---------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAG 149 (337)
T ss_pred CCCCEEEEecC---------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcc
Confidence 99999998642 489999999999999999999999999999999999999984 67889999999999889
Q ss_pred cHHHHHHHHHHHhcCCeEEEEe-CCcccHHHHHhcCCcEEEeCCCCcccc-----CCCCccEEEecCc--cHHHHHHhcc
Q 016265 244 GVGSLVIQLAKQVFGASRVAAT-SSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAIG--QCDRAVKAIK 315 (392)
Q Consensus 244 ~vG~~aiqlak~~~G~~vv~~~-~~~~~~~~~~~~G~~~vi~~~~~~~~~-----~~~~~D~vid~~G--~~~~~~~~l~ 315 (392)
++|++++++|+.+ .. ++++. ..+++.+.++++|++.+++.....+.+ ..+++|+++||+| ....++++++
T Consensus 150 ~~g~~~~~~a~~~-~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~ 227 (337)
T cd08275 150 GVGLAAGQLCKTV-PN-VTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLK 227 (337)
T ss_pred hHHHHHHHHHHHc-cC-cEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhc
Confidence 9999999999984 22 22222 345578888899999888876654322 2457999999998 3578899999
Q ss_pred cCCeEEEEcCCCCC---------------------------CceEEE---E----eec---HHHHHHHHHHHHCCCcccc
Q 016265 316 EGGTVVALTGAVTP---------------------------PGFRFV---V----TSN---GEVLKKLNPYLESGKVKPI 358 (392)
Q Consensus 316 ~~G~iv~~g~~~~~---------------------------~~~~~~---~----~~~---~~~~~~~~~~l~~g~l~~~ 358 (392)
++|+++.+|..... .+..+. . ... ...+.++++++.++.+++.
T Consensus 228 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (337)
T cd08275 228 PMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK 307 (337)
T ss_pred cCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc
Confidence 99999998754310 010110 0 001 1346778889999988765
Q ss_pred cCCCcccchhhHHHHHHHHHhCCCCeeEEEEe
Q 016265 359 IDPKGPFPFSQVVEAFSYIETNKATGKVVIHP 390 (392)
Q Consensus 359 ~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 390 (392)
.++.|++++++++++.+.++...||+++++
T Consensus 308 --~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 308 --IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred --eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 457899999999999999988889999864
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=4.8e-30 Score=244.46 Aligned_cols=291 Identities=38% Similarity=0.557 Sum_probs=237.4
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCC-CCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVK 162 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 162 (392)
|||+++...+....+++. +.+ |.+. +++++|++.++++|++|++.+.|.+.. ....|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~ 77 (323)
T cd08241 1 MKAVVCKELGGPEDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFVPGSEVAGVVEAVGEGVT 77 (323)
T ss_pred CeEEEEecCCCcceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC-CCCCCCcccceeEEEEEEeCCCCC
Confidence 689999876665567777 666 6666 499999999999999999988876531 223466899999999999999999
Q ss_pred CCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcC
Q 016265 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNG 241 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga 241 (392)
.+++||+|++.. ..|+|++|+.++.+.++++|+++++.+++.+.+++.+||+++. ...+++|++|+|+|+
T Consensus 78 ~~~~G~~V~~~~---------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~ 148 (323)
T cd08241 78 GFKVGDRVVALT---------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGA 148 (323)
T ss_pred CCCCCCEEEEec---------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 999999999864 1489999999999999999999999998888899999999985 678899999999998
Q ss_pred CCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc----C--CCCccEEEecCc--cHHHHHHh
Q 016265 242 SGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED----L--PEKFDVVYDAIG--QCDRAVKA 313 (392)
Q Consensus 242 ~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~----~--~~~~D~vid~~G--~~~~~~~~ 313 (392)
.|++|++++++|+. .|+++++++.++++.+.++++|++.+++....++.+ . .+++|+++||+| ..+.++++
T Consensus 149 ~~~~g~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~ 227 (323)
T cd08241 149 AGGVGLAAVQLAKA-LGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRS 227 (323)
T ss_pred CchHHHHHHHHHHH-hCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHh
Confidence 89999999999999 499999999988999999999998888876644422 1 347999999998 45788999
Q ss_pred cccCCeEEEEcCCCCCC-----------ceEEEEe-----------ecHHHHHHHHHHHHCCCcccccCCCcccchhhHH
Q 016265 314 IKEGGTVVALTGAVTPP-----------GFRFVVT-----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVV 371 (392)
Q Consensus 314 l~~~G~iv~~g~~~~~~-----------~~~~~~~-----------~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~ 371 (392)
++++|+++.++...... .+.+... .....+.++++++.++.+.+. .++.|+++++.
T Consensus 228 ~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 305 (323)
T cd08241 228 LAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPH--VSAVFPLEQAA 305 (323)
T ss_pred hccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccc--cceEEcHHHHH
Confidence 99999999987532110 1111110 012457888999999988654 56889999999
Q ss_pred HHHHHHHhCCCCeeEEEE
Q 016265 372 EAFSYIETNKATGKVVIH 389 (392)
Q Consensus 372 ~A~~~l~~~~~~gKvvl~ 389 (392)
++|+.+.++...+|++++
T Consensus 306 ~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 306 EALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHhCCCCCcEEeC
Confidence 999999988888898863
No 119
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=6.4e-31 Score=247.48 Aligned_cols=224 Identities=23% Similarity=0.255 Sum_probs=176.6
Q ss_pred cCCCceeEEEEEeCCCCC------CCCCCCEEEecccccc------------------cCC-------CCCCCcceeEEE
Q 016265 145 VPGYDVAGVVVKVGTQVK------EFKEGDEVYGDINEKA------------------LEG-------PKQFGSLAEYTA 193 (392)
Q Consensus 145 v~G~e~~G~V~~vG~~v~------~~~vGdrV~~~~~~~~------------------~~~-------~~~~G~~a~~~~ 193 (392)
++|||++|+|+++|++|+ +|++||||+......+ ..| ...+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 8999999976421100 011 113699999999
Q ss_pred ecCC-ceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccH
Q 016265 194 VEER-LLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNL 271 (392)
Q Consensus 194 v~~~-~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~ 271 (392)
+++. .++++|+++++++++.+++++.|+|+++++....+|++|+|+| +|++|++++|+||. .|++ +++++.+++|+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~-~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAA-AGAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCCEEEEECCCHHHH
Confidence 9997 6999999999999999999999999999887778999999998 69999999999999 4987 66777789999
Q ss_pred HHHHhcCCcEEEeCCCCc--cccC--CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCC--CCCce----------
Q 016265 272 EFLKSLGADLAIDYTKDN--FEDL--PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAV--TPPGF---------- 332 (392)
Q Consensus 272 ~~~~~~G~~~vi~~~~~~--~~~~--~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~--~~~~~---------- 332 (392)
++++++|+++++++.+.. ..+. ..++|++||++|. ++.++++++++|+++.+|... .+..+
T Consensus 159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~ 238 (280)
T TIGR03366 159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWL 238 (280)
T ss_pred HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCc
Confidence 999999999999875421 1111 3479999999983 689999999999999998642 11111
Q ss_pred EEE--EeecHHHHHHHHHHHHCC--CcccccCCCcccchhhH
Q 016265 333 RFV--VTSNGEVLKKLNPYLESG--KVKPIIDPKGPFPFSQV 370 (392)
Q Consensus 333 ~~~--~~~~~~~~~~~~~~l~~g--~l~~~~~~t~~~~l~~~ 370 (392)
.+. .....+.++++++++.++ +++...+++++||++|+
T Consensus 239 ~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 239 TIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 111 122356789999999974 56655667899999874
No 120
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.97 E-value=1.4e-29 Score=241.42 Aligned_cols=236 Identities=30% Similarity=0.435 Sum_probs=192.3
Q ss_pred eeEEEEcccCCcceEEEeccccCCCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCC
Q 016265 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKE 163 (392)
Q Consensus 84 mka~v~~~~~~~~~l~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 163 (392)
||+++.++.+ ...++++ +++.|.+.++||+||+.++++|++|++...|.+. ....|.++|+|++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 76 (306)
T cd08258 1 MKALVKTGPG-PGNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD--PVETPVVLGHEFSGTIVEVGPDVEG 76 (306)
T ss_pred CeeEEEecCC-CCceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC--cCCCCeeeccceEEEEEEECCCcCc
Confidence 6899987644 2448888 8999999999999999999999999998888652 2335778999999999999999999
Q ss_pred CCCCCEEEecccccc-------------------cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHH
Q 016265 164 FKEGDEVYGDINEKA-------------------LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEG 224 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~-------------------~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a 224 (392)
+++||+|++...... ..+....|+|++|++++...++++|+++++++++ ++.+..++|++
T Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~ 155 (306)
T cd08258 77 WKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHA 155 (306)
T ss_pred CCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHH
Confidence 999999998642100 0011135899999999999999999999999887 77777899999
Q ss_pred H-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEe--CCcccHHHHHhcCCcEEEeCCCCcccc------CCC
Q 016265 225 L-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAAT--SSTRNLEFLKSLGADLAIDYTKDNFED------LPE 295 (392)
Q Consensus 225 l-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~--~~~~~~~~~~~~G~~~vi~~~~~~~~~------~~~ 295 (392)
+ ..+.+++|++|+|.| +|++|++++|+|+. .|++++++. .++++.+.++++|++++ ++...++.+ ..+
T Consensus 156 l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~-~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~ 232 (306)
T cd08258 156 VAERSGIRPGDTVVVFG-PGPIGLLAAQVAKL-QGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGD 232 (306)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH-cCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence 8 457889999999976 89999999999999 499987663 24557888899999888 776655422 135
Q ss_pred CccEEEecCc---cHHHHHHhcccCCeEEEEcCCC
Q 016265 296 KFDVVYDAIG---QCDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 296 ~~D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~ 327 (392)
++|++||++| .+...+++|+++|+++.+|...
T Consensus 233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 267 (306)
T cd08258 233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFG 267 (306)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC
Confidence 7999999996 3578899999999999998754
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=2.2e-29 Score=235.86 Aligned_cols=260 Identities=32% Similarity=0.455 Sum_probs=215.8
Q ss_pred CeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEecccccccCCCCCCCcceeE
Q 016265 112 DQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEY 191 (392)
Q Consensus 112 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~ 191 (392)
+||+||+.++++|++|++...|.++ .+|.++|||++|+|+++|+++..+++||+|++.. .|+|++|
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~----------~g~~~~~ 66 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA----------PGAFATH 66 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC----CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe----------cCcccce
Confidence 5899999999999999999887642 3578999999999999999999999999999864 4899999
Q ss_pred EEecCCceeeCCCCCCHHhHhccchhHHHHHHHHH-hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc
Q 016265 192 TAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLE-RTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN 270 (392)
Q Consensus 192 ~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~ 270 (392)
+.++.+.++++|+++++.+++.+++++.++|+++. ...+++|++|+|+|+.|++|++++|+|+. .|+++++++.++++
T Consensus 67 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~-~g~~v~~~~~~~~~ 145 (293)
T cd05195 67 VRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQH-LGAEVFATVGSEEK 145 (293)
T ss_pred EEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHH-cCCEEEEEeCCHHH
Confidence 99999999999999999999999999999999984 57899999999999999999999999999 59999999998899
Q ss_pred HHHHHhcC--CcEEEeCCCCcccc----C--CCCccEEEecCcc--HHHHHHhcccCCeEEEEcCCCCC--Cc-------
Q 016265 271 LEFLKSLG--ADLAIDYTKDNFED----L--PEKFDVVYDAIGQ--CDRAVKAIKEGGTVVALTGAVTP--PG------- 331 (392)
Q Consensus 271 ~~~~~~~G--~~~vi~~~~~~~~~----~--~~~~D~vid~~G~--~~~~~~~l~~~G~iv~~g~~~~~--~~------- 331 (392)
.+.+++.| ++.+++.....+.+ . .+++|+++|++|. .+.++++++++|+++.++..... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~ 225 (293)
T cd05195 146 REFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFL 225 (293)
T ss_pred HHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhc
Confidence 99998888 78888876543322 1 3579999999984 68899999999999998754311 00
Q ss_pred --eEEEE-e----------ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 332 --FRFVV-T----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 332 --~~~~~-~----------~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
..+.. . ...+.+.+++++++++++++. .++.|+++++.++|+.+.++...||+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 226 RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPL--PPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccC--CCeeechhhHHHHHHHHhcCCCCceecC
Confidence 11110 0 012356788889999988754 4578999999999999999888788864
No 122
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=7.2e-29 Score=232.29 Aligned_cols=255 Identities=33% Similarity=0.511 Sum_probs=211.5
Q ss_pred EEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEecccccccCCCCCCCcceeEEEec
Q 016265 116 IKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVE 195 (392)
Q Consensus 116 V~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~ 195 (392)
||+.++++|++|++.+.|.++ .|.++|||++|+|+++|+++..+++||+|++.. .|+|++|+.++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------~g~~~~~~~~~ 66 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------PGSFATYVRTD 66 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc----------CCceeeEEEcc
Confidence 789999999999999887653 357899999999999999999999999999864 38999999999
Q ss_pred CCceeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 196 ERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 196 ~~~~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.+.++++|+++++++++.+++++.++|+++ +...+.+|++|+|+|+.|++|++++++|+. +|++++++++++++++++
T Consensus 67 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~-~g~~v~~~~~~~~~~~~~ 145 (288)
T smart00829 67 ARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQH-LGAEVFATAGSPEKRDFL 145 (288)
T ss_pred HHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHH
Confidence 999999999999999999999999999998 567899999999999999999999999998 599999999899999999
Q ss_pred HhcCC--cEEEeCCCCcccc----C--CCCccEEEecCc--cHHHHHHhcccCCeEEEEcCCCC--CC---------ceE
Q 016265 275 KSLGA--DLAIDYTKDNFED----L--PEKFDVVYDAIG--QCDRAVKAIKEGGTVVALTGAVT--PP---------GFR 333 (392)
Q Consensus 275 ~~~G~--~~vi~~~~~~~~~----~--~~~~D~vid~~G--~~~~~~~~l~~~G~iv~~g~~~~--~~---------~~~ 333 (392)
+++|+ +.++++...++.+ . .+++|+++|++| ....++++++++|+++.++.... .. ...
T Consensus 146 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (288)
T smart00829 146 RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVS 225 (288)
T ss_pred HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCce
Confidence 99998 7888876554422 1 347999999987 35788999999999999875421 00 111
Q ss_pred EEEe----------ecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 334 FVVT----------SNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 334 ~~~~----------~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
+... ...+.+.++++++.++++++. ..+.|++++++++++.+..++..+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 226 YHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred EEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 1110 012346778889999988764 4578999999999999998877788764
No 123
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.96 E-value=1.6e-27 Score=221.67 Aligned_cols=212 Identities=39% Similarity=0.563 Sum_probs=179.7
Q ss_pred eEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEeccccc--------------c
Q 016265 113 QVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEK--------------A 178 (392)
Q Consensus 113 eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~--------------~ 178 (392)
||+|++.++++|+.|++.+.|..+ ....+|.++|||++|+|+++|++++.|++||+|++..... .
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 79 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP-PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGG 79 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC-cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCC
Confidence 689999999999999999988754 2234578999999999999999999999999999865311 1
Q ss_pred cCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcC-CCCCCeEEEEcCCCcHHHHHHHHHHHhc
Q 016265 179 LEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTG-FSAGKSILVLNGSGGVGSLVIQLAKQVF 257 (392)
Q Consensus 179 ~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~-~~~g~~VlI~Ga~G~vG~~aiqlak~~~ 257 (392)
..+....|+|++|+.++.+.++++|+++++++++.+++++.|||+++.... +++|++|+|+|+++ +|++++++++. .
T Consensus 80 ~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~-~ 157 (271)
T cd05188 80 ILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKA-A 157 (271)
T ss_pred EeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHH-c
Confidence 122234699999999999999999999999999999999999999997654 58999999999666 99999999999 4
Q ss_pred CCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc-----CCCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCC
Q 016265 258 GASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED-----LPEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 258 G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~-----~~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~ 327 (392)
|.++++++.++++.+.++++|+++++++......+ ..+++|++||++|. ...++++++++|+++.++...
T Consensus 158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 99999999999999999999999988876654432 24579999999885 478899999999999998654
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.95 E-value=2.2e-26 Score=215.86 Aligned_cols=230 Identities=30% Similarity=0.388 Sum_probs=186.8
Q ss_pred CCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHH
Q 016265 140 SPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIE 219 (392)
Q Consensus 140 ~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ 219 (392)
.++|.++|||++|+|+++|++++++++||+|++. +.|++|+.++.+.++++|+++++++++.+ +++.
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ 84 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAA 84 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHH
Confidence 4578999999999999999999999999999984 46999999999999999999999999888 7899
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHHhcC-CcEEEeCCCCccccCCCCc
Q 016265 220 TAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLKSLG-ADLAIDYTKDNFEDLPEKF 297 (392)
Q Consensus 220 ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~~~G-~~~vi~~~~~~~~~~~~~~ 297 (392)
|||+++...++++|++|+|+| +|++|++++++|+.+ |++ +++++++++++++++++| ++.+++..... ....++
T Consensus 85 ta~~~~~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~-g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~ 160 (277)
T cd08255 85 TALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAA-GAREVVGVDPDAARRELAEALGPADPVAADTADE--IGGRGA 160 (277)
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEECCCHHHHHHHHHcCCCccccccchhh--hcCCCC
Confidence 999999888999999999997 799999999999994 998 888888999999999999 66665543211 123479
Q ss_pred cEEEecCc---cHHHHHHhcccCCeEEEEcCCCCC----------CceEEEE---e-----------ecHHHHHHHHHHH
Q 016265 298 DVVYDAIG---QCDRAVKAIKEGGTVVALTGAVTP----------PGFRFVV---T-----------SNGEVLKKLNPYL 350 (392)
Q Consensus 298 D~vid~~G---~~~~~~~~l~~~G~iv~~g~~~~~----------~~~~~~~---~-----------~~~~~~~~~~~~l 350 (392)
|++||++| ....++++++++|+++.+|..... ....+.. . ...+.++++++++
T Consensus 161 d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (277)
T cd08255 161 DVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL 240 (277)
T ss_pred CEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence 99999977 357899999999999998754321 0001110 0 0124678899999
Q ss_pred HCCCcccccCCCcccchhhHHHHHHHHHhC-CCCeeEEE
Q 016265 351 ESGKVKPIIDPKGPFPFSQVVEAFSYIETN-KATGKVVI 388 (392)
Q Consensus 351 ~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~-~~~gKvvl 388 (392)
.++.+++. +.+.|+++++.+||+.+.++ ....|+++
T Consensus 241 ~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 241 AEGRLEAL--ITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred HcCCcccc--ccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 99998765 46789999999999999877 23367653
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=3.9e-25 Score=199.22 Aligned_cols=267 Identities=24% Similarity=0.349 Sum_probs=206.2
Q ss_pred CCCCCCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCC----CceeEEEEEeCCCCCCCCCCCEEEecccccccCCC
Q 016265 107 PQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPG----YDVAGVVVKVGTQVKEFKEGDEVYGDINEKALEGP 182 (392)
Q Consensus 107 p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G----~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~~~~ 182 (392)
.++++++|+||..|.+.+|.-...+.-..+ ...-.|..+| ..++|+|++ ++.+++++||.|.+..
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~-~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~-------- 101 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDP-SDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV-------- 101 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCc-ccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec--------
Confidence 456899999999999999986555432221 1111223333 267899998 4567899999999963
Q ss_pred CCCCcceeEEEecCCc--eeeCC--CCCCHHhHhc-cchhHHHHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHh
Q 016265 183 KQFGSLAEYTAVEERL--LAPKP--KNLDFVQAAG-LPLAIETAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQV 256 (392)
Q Consensus 183 ~~~G~~a~~~~v~~~~--~~~iP--~~l~~~~aa~-l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~ 256 (392)
+|.||.+++... .++++ .+.++..... +.++.+|||-++ +....++|++|+|.||+|++|+++.|+||.+
T Consensus 102 ----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~ 177 (343)
T KOG1196|consen 102 ----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLM 177 (343)
T ss_pred ----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhc
Confidence 699999997643 34443 4555555443 478889999999 5788999999999999999999999999995
Q ss_pred cCCeEEEEeCCcccHHHHH-hcCCcEEEeCCCC-cccc-----CCCCccEEEecCcc--HHHHHHhcccCCeEEEEcCCC
Q 016265 257 FGASRVAATSSTRNLEFLK-SLGADLAIDYTKD-NFED-----LPEKFDVVYDAIGQ--CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 257 ~G~~vv~~~~~~~~~~~~~-~~G~~~vi~~~~~-~~~~-----~~~~~D~vid~~G~--~~~~~~~l~~~G~iv~~g~~~ 327 (392)
|++||....+++|.++++ ++|.|.++||.++ +..+ .++|+|+.||.+|+ ++..+..|+..||++.+|.-+
T Consensus 178 -Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~IS 256 (343)
T KOG1196|consen 178 -GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMIS 256 (343)
T ss_pred -CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeeh
Confidence 999999999999999997 6799999999887 4433 26799999999994 699999999999999998543
Q ss_pred -----CCCc---eEE-----------EE----eecHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCe
Q 016265 328 -----TPPG---FRF-----------VV----TSNGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATG 384 (392)
Q Consensus 328 -----~~~~---~~~-----------~~----~~~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~g 384 (392)
.+.. +.. .. ......++.+.+++++|+|+...++ .-.|+..+.||.-|.+|+..|
T Consensus 257 qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvG 334 (343)
T KOG1196|consen 257 QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVG 334 (343)
T ss_pred hccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCccc
Confidence 1111 111 10 1125667889999999999987554 346999999999999999999
Q ss_pred eEEEEeC
Q 016265 385 KVVIHPI 391 (392)
Q Consensus 385 Kvvl~~~ 391 (392)
|-++++.
T Consensus 335 Kqiv~va 341 (343)
T KOG1196|consen 335 KQLVKVA 341 (343)
T ss_pred ceEEEee
Confidence 9998764
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.94 E-value=3.5e-26 Score=233.22 Aligned_cols=276 Identities=24% Similarity=0.348 Sum_probs=226.8
Q ss_pred CCcceEEEeccccCC---CCCCCeEEEEEeEEecChHhHHhhcCCCCCCC-----CCCCCcCCCceeEEEEEeCCCCCCC
Q 016265 93 GGVDVLKFDEKVTVP---QVKEDQVLIKVVAAALNPVDGKRRQGKFKATD-----SPLPTVPGYDVAGVVVKVGTQVKEF 164 (392)
Q Consensus 93 ~~~~~l~~~~~~~~p---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-----~~~p~v~G~e~~G~V~~vG~~v~~~ 164 (392)
|+...++|. +.+.. +..++.=+.-|.|+.||..|+++..|+.+... .....++|-|++|+-
T Consensus 1424 GDlsSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd---------- 1492 (2376)
T KOG1202|consen 1424 GDLSSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD---------- 1492 (2376)
T ss_pred ccccceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------
Confidence 555678888 66654 34678888999999999999999999975321 233578999999873
Q ss_pred CCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHH-HhcCCCCCCeEEEEcCCC
Q 016265 165 KEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGL-ERTGFSAGKSILVLNGSG 243 (392)
Q Consensus 165 ~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlI~Ga~G 243 (392)
+-|.||++... .-++++-+.++.+.+|.+|++..+++|+..|+.+.|+|||| .+...++||++||++|+|
T Consensus 1493 ~~GrRvM~mvp---------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsG 1563 (2376)
T KOG1202|consen 1493 ASGRRVMGMVP---------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSG 1563 (2376)
T ss_pred CCCcEEEEeee---------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCC
Confidence 46999999875 46789999999999999999999999999999999999999 578899999999999999
Q ss_pred cHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCcEEEeCCCCccccC------CCCccEEEecCc--cHHHHH
Q 016265 244 GVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGADLAIDYTKDNFEDL------PEKFDVVYDAIG--QCDRAV 311 (392)
Q Consensus 244 ~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~~vi~~~~~~~~~~------~~~~D~vid~~G--~~~~~~ 311 (392)
++|++||.+|.+ .|++|+-++.+.+|++++.+ +-..++-|+++.+|+.. ++|+|+|++... -++..+
T Consensus 1564 GVGQAAIaiALa-~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASi 1642 (2376)
T KOG1202|consen 1564 GVGQAAIAIALA-HGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASI 1642 (2376)
T ss_pred chhHHHHHHHHH-cCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHH
Confidence 999999999998 59999999999999999864 23566677888887663 679999999977 478999
Q ss_pred HhcccCCeEEEEcCCCCCC----ce--------------EEEEeecHHHHHHHHHHHHCCC----cccccCCCcccchhh
Q 016265 312 KAIKEGGTVVALTGAVTPP----GF--------------RFVVTSNGEVLKKLNPYLESGK----VKPIIDPKGPFPFSQ 369 (392)
Q Consensus 312 ~~l~~~G~iv~~g~~~~~~----~~--------------~~~~~~~~~~~~~~~~~l~~g~----l~~~~~~t~~~~l~~ 369 (392)
+||+-.|||..+|-..... .+ +.++....+++.++..++++|. ++| +++++|+-.+
T Consensus 1643 RCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~P--L~ttvF~~~q 1720 (2376)
T KOG1202|consen 1643 RCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRP--LPTTVFHGQQ 1720 (2376)
T ss_pred HHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceec--cccccccHHH
Confidence 9999999999998654221 11 1123445677888888877654 444 4689999999
Q ss_pred HHHHHHHHHhCCCCeeEEEEeC
Q 016265 370 VVEAFSYIETNKATGKVVIHPI 391 (392)
Q Consensus 370 ~~~A~~~l~~~~~~gKvvl~~~ 391 (392)
+++||+.|.+|+++||+|++..
T Consensus 1721 vE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1721 VEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred HHHHHHHHhccCccceEEEEEc
Confidence 9999999999999999999864
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.76 E-value=4.2e-18 Score=137.13 Aligned_cols=91 Identities=36% Similarity=0.448 Sum_probs=74.0
Q ss_pred CCeEEEEEeEEecChHhHHhhcCCCCCCCCCCCCcCCCceeEEEEEeCCCCCCCCCCCEEEecccc--------------
Q 016265 111 EDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGTQVKEFKEGDEVYGDINE-------------- 176 (392)
Q Consensus 111 ~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~-------------- 176 (392)
|+|||||+.++|||++|++.+.|.. .....+|.++|||++|+|+++|++|++|++||||+.....
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~-~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGP-PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSS-SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhcc-ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccc
Confidence 6899999999999999999999852 2346689999999999999999999999999999875431
Q ss_pred ----cccCCCCCCCcceeEEEecCCceeeC
Q 016265 177 ----KALEGPKQFGSLAEYTAVEERLLAPK 202 (392)
Q Consensus 177 ----~~~~~~~~~G~~a~~~~v~~~~~~~i 202 (392)
....+...+|+|+||+++++++++++
T Consensus 80 ~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 11245557899999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.43 E-value=9.3e-13 Score=109.11 Aligned_cols=83 Identities=41% Similarity=0.635 Sum_probs=74.1
Q ss_pred cHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccC------CCCccEEEecCc---cHHHHHHhc
Q 016265 244 GVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL------PEKFDVVYDAIG---QCDRAVKAI 314 (392)
Q Consensus 244 ~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~------~~~~D~vid~~G---~~~~~~~~l 314 (392)
++|++++|+||+. |+++++++++++|+++++++|+++++++++.++.+. .+++|+||||+| .++.+++++
T Consensus 1 ~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAM-GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHc-CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 5899999999995 899999999999999999999999999988865432 247999999999 368999999
Q ss_pred ccCCeEEEEcCCC
Q 016265 315 KEGGTVVALTGAV 327 (392)
Q Consensus 315 ~~~G~iv~~g~~~ 327 (392)
+++|+++.+|...
T Consensus 80 ~~~G~~v~vg~~~ 92 (130)
T PF00107_consen 80 RPGGRIVVVGVYG 92 (130)
T ss_dssp EEEEEEEEESSTS
T ss_pred ccCCEEEEEEccC
Confidence 9999999999876
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.31 E-value=1.3e-12 Score=107.83 Aligned_cols=108 Identities=38% Similarity=0.623 Sum_probs=75.5
Q ss_pred cCCcEEEeCCCCccccCCCCccEEEecCc--c---HHHHHHhcccCCeEEEEcCC-C------CCCceEEE--E--ee--
Q 016265 277 LGADLAIDYTKDNFEDLPEKFDVVYDAIG--Q---CDRAVKAIKEGGTVVALTGA-V------TPPGFRFV--V--TS-- 338 (392)
Q Consensus 277 ~G~~~vi~~~~~~~~~~~~~~D~vid~~G--~---~~~~~~~l~~~G~iv~~g~~-~------~~~~~~~~--~--~~-- 338 (392)
+||++++||+..++ ...+++|+|||++| . +..++++| ++|+++.++.. . ....+... . ..
T Consensus 1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPNA 78 (127)
T ss_dssp CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--HH
T ss_pred CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCCc
Confidence 69999999998777 44679999999999 3 24555677 99999999851 1 11122222 1 11
Q ss_pred -cHHHHHHHHHHHHCCCcccccCCCcccchhhHHHHHHHHHhCCCCeeEEE
Q 016265 339 -NGEVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 388 (392)
Q Consensus 339 -~~~~~~~~~~~l~~g~l~~~~~~t~~~~l~~~~~A~~~l~~~~~~gKvvl 388 (392)
..+.++++.+++++|++++.+. .+|||+++.+|++.+++++..||+||
T Consensus 79 ~~~~~l~~l~~l~~~G~l~~~i~--~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 79 IRAEALEELAELVAEGKLKPPID--RVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHHHHHHHHHHHHHTTSS---EE--EEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred hHHHHHHHHHHHHHCCCeEEeec--cEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 3456999999999999999854 67999999999999999999999996
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.26 E-value=8.5e-11 Score=114.94 Aligned_cols=162 Identities=19% Similarity=0.193 Sum_probs=119.1
Q ss_pred HHHHHHh-cC-CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCcc
Q 016265 221 AYEGLER-TG-FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFD 298 (392)
Q Consensus 221 a~~al~~-~~-~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D 298 (392)
.+.++.+ .+ ..+|++|+|+| .|.+|+.+++.++. +|++|++++.++.|++.++.+|++.+ +. .+..+++|
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~-~Ga~ViV~d~d~~R~~~A~~~G~~~~-~~-----~e~v~~aD 259 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRG-QGARVIVTEVDPICALQAAMEGYEVM-TM-----EEAVKEGD 259 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEECChhhHHHHHhcCCEEc-cH-----HHHHcCCC
Confidence 4555543 23 46899999998 99999999999998 59999998899999999999998543 21 22335789
Q ss_pred EEEecCcc---HHH-HHHhcccCCeEEEEcCCCCCCce--------EEE--EeecHH-HHH--HHHHHHHCCCc-ccccC
Q 016265 299 VVYDAIGQ---CDR-AVKAIKEGGTVVALTGAVTPPGF--------RFV--VTSNGE-VLK--KLNPYLESGKV-KPIID 360 (392)
Q Consensus 299 ~vid~~G~---~~~-~~~~l~~~G~iv~~g~~~~~~~~--------~~~--~~~~~~-~~~--~~~~~l~~g~l-~~~~~ 360 (392)
+||+|+|. ++. .++++++||+++.+|......++ ... .....+ .++ +.+.++.+|++ +....
T Consensus 260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~ 339 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA 339 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence 99999993 454 48999999999999865321111 111 111111 344 68999999998 66666
Q ss_pred CCcc-----cchh-hHHHHHHHHHhCCCC-eeEEEEe
Q 016265 361 PKGP-----FPFS-QVVEAFSYIETNKAT-GKVVIHP 390 (392)
Q Consensus 361 ~t~~-----~~l~-~~~~A~~~l~~~~~~-gKvvl~~ 390 (392)
.+|. |+|+ |+.++++.+.++... -|+++.|
T Consensus 340 ~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 340 TGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred CCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 7888 9999 999999999887643 4666654
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.04 E-value=1.4e-09 Score=108.99 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=95.8
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE-EeCCCCc-------------c-----
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA-IDYTKDN-------------F----- 290 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v-i~~~~~~-------------~----- 290 (392)
..++++|+|+| +|.+|+++++.|+.+ |++|++++.+++|++.++++|++.+ +|..+++ +
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~l-GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSL-GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 46899999998 999999999999995 9999999999999999999999954 6653321 0
Q ss_pred ---ccCCCCccEEEecCcc---------HHHHHHhcccCCeEEEEcCCC-C----CC---ce------EEEE-eecH-HH
Q 016265 291 ---EDLPEKFDVVYDAIGQ---------CDRAVKAIKEGGTVVALTGAV-T----PP---GF------RFVV-TSNG-EV 342 (392)
Q Consensus 291 ---~~~~~~~D~vid~~G~---------~~~~~~~l~~~G~iv~~g~~~-~----~~---~~------~~~~-~~~~-~~ 342 (392)
.+..+++|+||+|+|. .+++++.+++||++++++... . +. .+ .+.- ...+ ++
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~ 319 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRL 319 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhH
Confidence 1112579999999983 489999999999999997642 1 11 01 1110 1123 34
Q ss_pred HHHHHHHHHCCCcccccCCC
Q 016265 343 LKKLNPYLESGKVKPIIDPK 362 (392)
Q Consensus 343 ~~~~~~~l~~g~l~~~~~~t 362 (392)
..+..+++.++.++.....+
T Consensus 320 p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 320 PTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHHhCCccHHHHhc
Confidence 44688999998887654444
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.42 E-value=2.3e-06 Score=85.86 Aligned_cols=94 Identities=23% Similarity=0.431 Sum_probs=74.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE-EeCCCC-------------c-------
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA-IDYTKD-------------N------- 289 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v-i~~~~~-------------~------- 289 (392)
.++++|+|+| +|.+|++++++|+.+ |+.|++.+.++++++.++++|++.+ ++..++ +
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~l-GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 4679999998 999999999999995 9999999999999999999998763 332210 0
Q ss_pred -cccCCCCccEEEecC---c--c----HHHHHHhcccCCeEEEEcCC
Q 016265 290 -FEDLPEKFDVVYDAI---G--Q----CDRAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 290 -~~~~~~~~D~vid~~---G--~----~~~~~~~l~~~G~iv~~g~~ 326 (392)
+.+..+++|++|+|+ | . .+.+++.+++|+.+|+++..
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 112245799999998 5 2 37889999999999998644
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.34 E-value=5.6e-06 Score=77.52 Aligned_cols=157 Identities=16% Similarity=0.218 Sum_probs=96.7
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC--eEEEEeCCcccHHHHHhc----CCcEEEeCCCCccccC---CCCc
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA--SRVAATSSTRNLEFLKSL----GADLAIDYTKDNFEDL---PEKF 297 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~--~vv~~~~~~~~~~~~~~~----G~~~vi~~~~~~~~~~---~~~~ 297 (392)
.+.+++|++||.+| +|+ |..+.++++.. |. +++.++.+++.++.+++. |.+.+ .....++.++ .+.|
T Consensus 72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~-g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d~~~l~~~~~~f 147 (272)
T PRK11873 72 LAELKPGETVLDLG-SGG-GFDCFLAARRV-GPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGEIEALPVADNSV 147 (272)
T ss_pred hccCCCCCEEEEeC-CCC-CHHHHHHHHHh-CCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcchhhCCCCCCce
Confidence 45688999999998 777 98888888874 64 588888899988888653 43322 1111122221 3479
Q ss_pred cEEEecC-c--------cHHHHHHhcccCCeEEEEcCCCCCC---ce----EEEE--eecHHHHHHHHHHHHCCCcc-cc
Q 016265 298 DVVYDAI-G--------QCDRAVKAIKEGGTVVALTGAVTPP---GF----RFVV--TSNGEVLKKLNPYLESGKVK-PI 358 (392)
Q Consensus 298 D~vid~~-G--------~~~~~~~~l~~~G~iv~~g~~~~~~---~~----~~~~--~~~~~~~~~~~~~l~~g~l~-~~ 358 (392)
|+|+... - .++.+.++|+|||+++..+...... .+ .+.. ........++.+++++..+. ..
T Consensus 148 D~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~ 227 (272)
T PRK11873 148 DVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDIT 227 (272)
T ss_pred eEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceE
Confidence 9998542 1 2688999999999998865432110 00 0000 00011234566777763333 33
Q ss_pred cCCCcccchhhHHHHHHHH--HhCCCCeeEE
Q 016265 359 IDPKGPFPFSQVVEAFSYI--ETNKATGKVV 387 (392)
Q Consensus 359 ~~~t~~~~l~~~~~A~~~l--~~~~~~gKvv 387 (392)
+.....++++++.++++.+ .++...++.+
T Consensus 228 i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 228 IQPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred EEeccceecccHHHHHHHhccccccccCceE
Confidence 3345678899999999988 5555444444
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.24 E-value=7.3e-06 Score=80.73 Aligned_cols=100 Identities=21% Similarity=0.274 Sum_probs=77.7
Q ss_pred HHHHHHHhc-CCC-CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCc
Q 016265 220 TAYEGLERT-GFS-AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKF 297 (392)
Q Consensus 220 ta~~al~~~-~~~-~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~ 297 (392)
.+|+++.++ ++. .|++|+|+| .|.+|..+++.++. +|++|++++.++.|...+...|++ +.+ ..+..+++
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~-~Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal~~a 268 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRG-LGARVIVTEVDPICALQAAMDGFR-VMT-----MEEAAELG 268 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHHhCC
Confidence 356777655 444 899999998 99999999999998 599999988888887777667764 222 23334589
Q ss_pred cEEEecCcc---H-HHHHHhcccCCeEEEEcCCC
Q 016265 298 DVVYDAIGQ---C-DRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 298 D~vid~~G~---~-~~~~~~l~~~G~iv~~g~~~ 327 (392)
|+||+|+|. + ...++.+++|+.++..|...
T Consensus 269 DVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 269 DIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred CEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 999999984 3 36788999999999887654
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.11 E-value=4.7e-05 Score=72.09 Aligned_cols=99 Identities=17% Similarity=0.339 Sum_probs=76.3
Q ss_pred HHHhcCCC-CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEe
Q 016265 224 GLERTGFS-AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYD 302 (392)
Q Consensus 224 al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid 302 (392)
+++..... .|.+|+|+| .|.+|+.+++.++. .|+++++.+++.++++.++++|+..+ .+ .+..+...++|+||+
T Consensus 142 a~~~~~~~l~g~kvlViG-~G~iG~~~a~~L~~-~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~aDiVI~ 216 (296)
T PRK08306 142 AIEHTPITIHGSNVLVLG-FGRTGMTLARTLKA-LGANVTVGARKSAHLARITEMGLSPF-HL--SELAEEVGKIDIIFN 216 (296)
T ss_pred HHHhCCCCCCCCEEEEEC-CcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHhCCCCEEEE
Confidence 34443333 689999998 89999999999998 59999999999888888888987543 21 223344457999999
Q ss_pred cCcc---HHHHHHhcccCCeEEEEcCCC
Q 016265 303 AIGQ---CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 303 ~~G~---~~~~~~~l~~~G~iv~~g~~~ 327 (392)
|++. .+..++.+++++.++.++...
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~p 244 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKP 244 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCC
Confidence 9873 367788899999999987655
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.07 E-value=2.9e-05 Score=76.14 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=75.8
Q ss_pred HHHHHHhc-C-CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCcc
Q 016265 221 AYEGLERT-G-FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFD 298 (392)
Q Consensus 221 a~~al~~~-~-~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D 298 (392)
++.++.+. + ...|++|+|+| .|.+|+.+++.++. +|++|++++.++.|...++..|+. +.+. .+..++.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~-~Ga~ViV~d~dp~r~~~A~~~G~~-v~~l-----eeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARG-MGARVIVTEVDPIRALEAAMDGFR-VMTM-----EEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhh-CcCEEEEEeCChhhHHHHHhcCCE-eCCH-----HHHHhcCC
Confidence 45555443 3 46899999998 99999999999998 599999988888887777777763 3221 22335789
Q ss_pred EEEecCcc---H-HHHHHhcccCCeEEEEcCCC
Q 016265 299 VVYDAIGQ---C-DRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 299 ~vid~~G~---~-~~~~~~l~~~G~iv~~g~~~ 327 (392)
++|+++|. + ...+..+++|+.++..|...
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 99999984 3 35888999999999887643
No 137
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.03 E-value=6e-05 Score=69.71 Aligned_cols=138 Identities=22% Similarity=0.278 Sum_probs=89.3
Q ss_pred CCCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcC
Q 016265 162 KEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNG 241 (392)
Q Consensus 162 ~~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga 241 (392)
+.+++||+++..+ +|.+|.. +...++.+++++++..+.- +... ...+.+.. ...++++||-+|
T Consensus 65 ~p~~~g~~~~i~p------------~~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~-~~l~~l~~-~~~~~~~VLDiG- 127 (250)
T PRK00517 65 HPIRIGDRLWIVP------------SWEDPPD-PDEINIELDPGMAFGTGTH-PTTR-LCLEALEK-LVLPGKTVLDVG- 127 (250)
T ss_pred CCEEEcCCEEEEC------------CCcCCCC-CCeEEEEECCCCccCCCCC-HHHH-HHHHHHHh-hcCCCCEEEEeC-
Confidence 4477899887753 4666654 7778899999988875542 1111 12333332 256899999998
Q ss_pred CCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhc----CCcEEEeCCCCccccCCCCccEEEecCc-c-----HHHH
Q 016265 242 SGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSL----GADLAIDYTKDNFEDLPEKFDVVYDAIG-Q-----CDRA 310 (392)
Q Consensus 242 ~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~----G~~~vi~~~~~~~~~~~~~~D~vid~~G-~-----~~~~ 310 (392)
+|. |.+++.+++. |+ +++.++.++..++.+++. +....+.. ......||+|+.... . +..+
T Consensus 128 cGs-G~l~i~~~~~--g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~-----~~~~~~fD~Vvani~~~~~~~l~~~~ 199 (250)
T PRK00517 128 CGS-GILAIAAAKL--GAKKVLAVDIDPQAVEAARENAELNGVELNVYL-----PQGDLKADVIVANILANPLLELAPDL 199 (250)
T ss_pred CcH-HHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEE-----ccCCCCcCEEEEcCcHHHHHHHHHHH
Confidence 776 9888877763 66 488888888887777543 32111111 000115899987654 1 3678
Q ss_pred HHhcccCCeEEEEc
Q 016265 311 VKAIKEGGTVVALT 324 (392)
Q Consensus 311 ~~~l~~~G~iv~~g 324 (392)
.++|++||+++..+
T Consensus 200 ~~~LkpgG~lilsg 213 (250)
T PRK00517 200 ARLLKPGGRLILSG 213 (250)
T ss_pred HHhcCCCcEEEEEE
Confidence 88999999998764
No 138
>PLN02494 adenosylhomocysteinase
Probab=97.90 E-value=4.4e-05 Score=75.63 Aligned_cols=97 Identities=20% Similarity=0.219 Sum_probs=75.5
Q ss_pred HHHHHhc-C-CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccE
Q 016265 222 YEGLERT-G-FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDV 299 (392)
Q Consensus 222 ~~al~~~-~-~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~ 299 (392)
+.++.+. + .-.|++|+|+| .|.+|+.+++.++. +|++|+++..++.+...+...|+..+ + ..+..+..|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka-~Ga~VIV~e~dp~r~~eA~~~G~~vv-~-----leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKA-AGARVIVTEIDPICALQALMEGYQVL-T-----LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCchhhHHHHhcCCeec-c-----HHHHHhhCCE
Confidence 5555332 3 35799999998 99999999999998 69998888888877777777776532 1 2333356899
Q ss_pred EEecCcc---H-HHHHHhcccCCeEEEEcCC
Q 016265 300 VYDAIGQ---C-DRAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 300 vid~~G~---~-~~~~~~l~~~G~iv~~g~~ 326 (392)
+|+++|. + ...++.|++++.++.+|..
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 9999983 2 7899999999999999874
No 139
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.67 E-value=8.3e-05 Score=71.01 Aligned_cols=103 Identities=21% Similarity=0.272 Sum_probs=72.8
Q ss_pred CceeeCCCCCCHHhHhcc-chhHHHHHHHHHhcCC----CCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCccc
Q 016265 197 RLLAPKPKNLDFVQAAGL-PLAIETAYEGLERTGF----SAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRN 270 (392)
Q Consensus 197 ~~~~~iP~~l~~~~aa~l-~~~~~ta~~al~~~~~----~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~ 270 (392)
..++++|+.+..+.++.. +.+ .++++++.+.. -+|.+|+|+| +|.+|.++++.++. .|+ +++++.++.+|
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~s--v~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~-~g~~~V~v~~r~~~r 214 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVS--ISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAA-KGVAEITIANRTYER 214 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcC--HHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHH-cCCCEEEEEeCCHHH
Confidence 346778888888877665 433 47777754433 4789999998 89999999999887 465 56667777776
Q ss_pred H-HHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc
Q 016265 271 L-EFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 271 ~-~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~ 306 (392)
. ++++++|++ +++.. +..+....+|+||.|++.
T Consensus 215 a~~la~~~g~~-~~~~~--~~~~~l~~aDvVi~at~~ 248 (311)
T cd05213 215 AEELAKELGGN-AVPLD--ELLELLNEADVVISATGA 248 (311)
T ss_pred HHHHHHHcCCe-EEeHH--HHHHHHhcCCEEEECCCC
Confidence 4 667788874 33332 233334568999999984
No 140
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.64 E-value=0.00055 Score=68.09 Aligned_cols=89 Identities=24% Similarity=0.266 Sum_probs=70.2
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc---
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ--- 306 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~--- 306 (392)
.-.|++|+|+| .|.+|...++.++. +|++|+++..++.+...+...|+..+ ++.+..+..|+|+.++|.
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a-~Ga~ViV~e~dp~~a~~A~~~G~~~~------~leell~~ADIVI~atGt~~i 322 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRG-FGARVVVTEIDPICALQAAMEGYQVV------TLEDVVETADIFVTATGNKDI 322 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCchhHHHHHhcCceec------cHHHHHhcCCEEEECCCcccc
Confidence 45799999998 99999999999998 69998888777766655555675422 234445678999999983
Q ss_pred H-HHHHHhcccCCeEEEEcCC
Q 016265 307 C-DRAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 307 ~-~~~~~~l~~~G~iv~~g~~ 326 (392)
+ ...++.|++++.++.+|..
T Consensus 323 I~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 323 ITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cCHHHHhccCCCcEEEEcCCC
Confidence 3 5899999999999988754
No 141
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.62 E-value=0.00028 Score=68.99 Aligned_cols=92 Identities=21% Similarity=0.374 Sum_probs=67.7
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCcEEEeCCC-CccccCCCCccEEEecC---cc-
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGADLAIDYTK-DNFEDLPEKFDVVYDAI---GQ- 306 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~~vi~~~~-~~~~~~~~~~D~vid~~---G~- 306 (392)
+.+|+|+| +|.+|+.+++.++. .|++|+++++++++++.+. .+|......... ..+.+....+|++|+|+ |.
T Consensus 167 ~~~VlViG-aG~vG~~aa~~a~~-lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 167 PGDVTIIG-GGVVGTNAAKMANG-LGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAK 244 (370)
T ss_pred CceEEEEc-CCHHHHHHHHHHHH-CCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCC
Confidence 45699998 89999999999998 4999888888888877765 455532222221 22333446799999997 32
Q ss_pred -----HHHHHHhcccCCeEEEEcCC
Q 016265 307 -----CDRAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 307 -----~~~~~~~l~~~G~iv~~g~~ 326 (392)
....++.+++++.++.++..
T Consensus 245 ~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 245 APKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCcCcCHHHHhcCCCCCEEEEEecC
Confidence 37788899999999998643
No 142
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.58 E-value=0.00011 Score=76.14 Aligned_cols=76 Identities=21% Similarity=0.396 Sum_probs=58.4
Q ss_pred CCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC---------------------cccHHHHHhcCCcEEEeCCC
Q 016265 229 GFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS---------------------TRNLEFLKSLGADLAIDYTK 287 (392)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~---------------------~~~~~~~~~~G~~~vi~~~~ 287 (392)
..+.|++|+|+| +|++|+++++.++. .|++|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~-~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIG-GGPAGLSAAYHLRR-MGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHH-CCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 367899999998 99999999999988 59998888742 34567788999987776533
Q ss_pred -Cc--cccCCCCccEEEecCcc
Q 016265 288 -DN--FEDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 288 -~~--~~~~~~~~D~vid~~G~ 306 (392)
.+ ..+...++|+||+++|.
T Consensus 211 ~~~~~~~~~~~~~D~Vi~AtG~ 232 (564)
T PRK12771 211 GEDITLEQLEGEFDAVFVAIGA 232 (564)
T ss_pred CCcCCHHHHHhhCCEEEEeeCC
Confidence 22 22334579999999994
No 143
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.51 E-value=0.00022 Score=66.69 Aligned_cols=96 Identities=26% Similarity=0.510 Sum_probs=60.8
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcEEEeCCCCccccCCCCccEE
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADLAIDYTKDNFEDLPEKFDVV 300 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~vi~~~~~~~~~~~~~~D~v 300 (392)
++++++++|++||-+| +| -|-++..+|+. +|++|+.++.|++..+.++ +.|...-+.....++.+....||.|
T Consensus 55 ~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~-~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~I 131 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIG-CG-WGGLAIYAAER-YGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRI 131 (273)
T ss_dssp HTTTT--TT-EEEEES--T-TSHHHHHHHHH-H--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEE
T ss_pred HHHhCCCCCCEEEEeC-CC-ccHHHHHHHHH-cCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEE
Confidence 4678999999999998 55 78889999998 6999999999999888764 4553221222223445555689988
Q ss_pred Eec-----Cc--c----HHHHHHhcccCCeEEEE
Q 016265 301 YDA-----IG--Q----CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 301 id~-----~G--~----~~~~~~~l~~~G~iv~~ 323 (392)
+.. +| . ++.+.+.|+|||+++.-
T Consensus 132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 743 44 1 47888899999998743
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.40 E-value=0.00086 Score=71.06 Aligned_cols=109 Identities=23% Similarity=0.247 Sum_probs=71.2
Q ss_pred CcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEe
Q 016265 186 GSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAAT 265 (392)
Q Consensus 186 G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~ 265 (392)
-++++|..+++..++.+ +.++.+++..... ......+|++|||+||+|++|+..++.+.. .|++|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~-~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAA-EGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHH-CcCEEEEEe
Confidence 45677877777777776 6666666642100 012234689999999999999999988877 599999999
Q ss_pred CCcccHHHHH-hcCC--c---EEEeCCCCc-ccc-------CCCCccEEEecCc
Q 016265 266 SSTRNLEFLK-SLGA--D---LAIDYTKDN-FED-------LPEKFDVVYDAIG 305 (392)
Q Consensus 266 ~~~~~~~~~~-~~G~--~---~vi~~~~~~-~~~-------~~~~~D~vid~~G 305 (392)
++.++++.+. .++. . ...|..+.. +.+ ..+++|++|++.|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 8887765543 3443 1 122333221 111 1247999999987
No 145
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.38 E-value=1.8e-05 Score=78.61 Aligned_cols=148 Identities=18% Similarity=0.257 Sum_probs=94.8
Q ss_pred cCCCceeEEEEEeCCCCCCCCCCCEEEe-cc-------cccccCCCCCCCcceeEEEecCCceee---C-CCCCCHHhHh
Q 016265 145 VPGYDVAGVVVKVGTQVKEFKEGDEVYG-DI-------NEKALEGPKQFGSLAEYTAVEERLLAP---K-PKNLDFVQAA 212 (392)
Q Consensus 145 v~G~e~~G~V~~vG~~v~~~~vGdrV~~-~~-------~~~~~~~~~~~G~~a~~~~v~~~~~~~---i-P~~l~~~~aa 212 (392)
.-|.|+++.+.+|++++++.-+|+.-++ .+ ......|...++.|++++.++. .+.. + +..++...+|
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A 167 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA 167 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence 4688999999999999888666666431 10 0112233445678899887766 3322 3 2233322221
Q ss_pred ccchhHHHHHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHH-HHHhcCCcEEEeCCCCcc
Q 016265 213 GLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLE-FLKSLGADLAIDYTKDNF 290 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~-~~~~~G~~~vi~~~~~~~ 290 (392)
.-.+.+..+..+|++|+|+| +|.+|.++++.++. .| .+++++.++.++.+ +++++|.. .++.. +.
T Consensus 168 --------v~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~-~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~--~l 234 (417)
T TIGR01035 168 --------VELAERIFGSLKGKKALLIG-AGEMGELVAKHLLR-KGVGKILIANRTYERAEDLAKELGGE-AVKFE--DL 234 (417)
T ss_pred --------HHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH--HH
Confidence 11122334456789999998 89999999999988 58 56778888877754 66777764 33321 23
Q ss_pred ccCCCCccEEEecCcc
Q 016265 291 EDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 291 ~~~~~~~D~vid~~G~ 306 (392)
.+...++|+||+|+|.
T Consensus 235 ~~~l~~aDvVi~aT~s 250 (417)
T TIGR01035 235 EEYLAEADIVISSTGA 250 (417)
T ss_pred HHHHhhCCEEEECCCC
Confidence 3344589999999983
No 146
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.37 E-value=0.0022 Score=56.83 Aligned_cols=101 Identities=21% Similarity=0.256 Sum_probs=70.9
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH----HHHhcCCcEEEeCCCCcccc--CC
Q 016265 221 AYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE----FLKSLGADLAIDYTKDNFED--LP 294 (392)
Q Consensus 221 a~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~----~~~~~G~~~vi~~~~~~~~~--~~ 294 (392)
....++...+++|++||=+| .|.|..++-+|+.. + +|+.+.+.++=.+ .++.+|...|.-...+...- ..
T Consensus 61 vA~m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~-~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~ 136 (209)
T COG2518 61 VARMLQLLELKPGDRVLEIG--TGSGYQAAVLARLV-G-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEE 136 (209)
T ss_pred HHHHHHHhCCCCCCeEEEEC--CCchHHHHHHHHHh-C-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCC
Confidence 44456778899999999997 45699999999974 5 7888877665333 34668875433222222211 22
Q ss_pred CCccEEEecCc--c-HHHHHHhcccCCeEEEEcC
Q 016265 295 EKFDVVYDAIG--Q-CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 295 ~~~D~vid~~G--~-~~~~~~~l~~~G~iv~~g~ 325 (392)
..||.++-+.+ . .+..++.|++||++|..-+
T Consensus 137 aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 137 APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 47999987766 2 4899999999999988755
No 147
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.32 E-value=0.0003 Score=70.14 Aligned_cols=148 Identities=19% Similarity=0.258 Sum_probs=92.2
Q ss_pred cCCCceeEEEEEeCCCCCCCCCCCEEEe-ccc-------ccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccch
Q 016265 145 VPGYDVAGVVVKVGTQVKEFKEGDEVYG-DIN-------EKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPL 216 (392)
Q Consensus 145 v~G~e~~G~V~~vG~~v~~~~vGdrV~~-~~~-------~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~ 216 (392)
.-|||+++.+.+|+++.++.-+|+.-++ .+. .....|...++.|++.+ ++|+.+..+.+.. ..
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~--------~~~k~v~~~t~i~-~~ 161 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAF--------SVAKRVRTETGIG-AG 161 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH--------HHHhhHhhhcCCC-CC
Confidence 4699999999999999888666665321 110 01111112234444443 3344333332222 22
Q ss_pred hHHHHHHHHHhcC----CCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHH-HHHhcCCcEEEeCCCCcc
Q 016265 217 AIETAYEGLERTG----FSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLE-FLKSLGADLAIDYTKDNF 290 (392)
Q Consensus 217 ~~~ta~~al~~~~----~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~-~~~~~G~~~vi~~~~~~~ 290 (392)
+...++++++.+. ..+|++|+|+| +|.+|.++++.++. .|+ +++++.++.++.+ +++++|.+ +++. .+.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~-~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~ 236 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAE-KGVRKITVANRTLERAEELAEEFGGE-AIPL--DEL 236 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHH-CCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HHH
Confidence 3334777775433 35789999998 89999999999987 587 6777788877755 66778864 3333 223
Q ss_pred ccCCCCccEEEecCcc
Q 016265 291 EDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 291 ~~~~~~~D~vid~~G~ 306 (392)
.+...++|+||+|+|+
T Consensus 237 ~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 237 PEALAEADIVISSTGA 252 (423)
T ss_pred HHHhccCCEEEECCCC
Confidence 3334579999999983
No 148
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.31 E-value=0.0011 Score=62.43 Aligned_cols=91 Identities=16% Similarity=0.317 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-H--H
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ-C--D 308 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~-~--~ 308 (392)
.|++|+|+| .|.+|.+++..++. +|+++++..+++++.+.+.++|... +.. .+..+...++|+||+++.. + .
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~-~G~~V~v~~R~~~~~~~~~~~g~~~-~~~--~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSA-LGARVFVGARSSADLARITEMGLIP-FPL--NKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHCCCee-ecH--HHHHHHhccCCEEEECCChHHhCH
Confidence 578999998 89999999999998 5999999999888877777777542 221 2233344689999999872 2 5
Q ss_pred HHHHhcccCCeEEEEcCCC
Q 016265 309 RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 309 ~~~~~l~~~G~iv~~g~~~ 327 (392)
..++.++++..++.++..+
T Consensus 225 ~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred HHHhcCCCCeEEEEeCcCC
Confidence 6778889988888887644
No 149
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.28 E-value=0.0024 Score=56.78 Aligned_cols=117 Identities=21% Similarity=0.255 Sum_probs=77.9
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHH----hcC-CcEE--EeCCCCc-cccCCC
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLK----SLG-ADLA--IDYTKDN-FEDLPE 295 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~----~~G-~~~v--i~~~~~~-~~~~~~ 295 (392)
+.+..+.+|++|+-+| +|. |.+++++|+.+. +.+++.++.+++.++.++ .+| .+.+ +..+... ......
T Consensus 33 l~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~ 110 (198)
T PRK00377 33 LSKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINE 110 (198)
T ss_pred HHHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCC
Confidence 3567889999999998 777 999999998742 357888899888877654 456 3322 2222111 122345
Q ss_pred CccEEEecCc------cHHHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCcc
Q 016265 296 KFDVVYDAIG------QCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 296 ~~D~vid~~G------~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
.+|.||...+ .++.+.+.|++||+++... .....+.++.+.+.+..+.
T Consensus 111 ~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~-------------~~~~~~~~~~~~l~~~g~~ 164 (198)
T PRK00377 111 KFDRIFIGGGSEKLKEIISASWEIIKKGGRIVIDA-------------ILLETVNNALSALENIGFN 164 (198)
T ss_pred CCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEEe-------------ecHHHHHHHHHHHHHcCCC
Confidence 7999998654 2477888999999987431 1334567777777654443
No 150
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.003 Score=57.32 Aligned_cols=94 Identities=21% Similarity=0.356 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-Hhc---CCcEEE--eCCCCc-ccc-------CCCCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSL---GADLAI--DYTKDN-FED-------LPEKF 297 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~---G~~~vi--~~~~~~-~~~-------~~~~~ 297 (392)
.+++|+|+||+|++|..+++.+.. .|++|+++++++++.+.+ +++ +..+.+ |..+.. ..+ ...++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALK-EGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999987 599999999988776555 222 222333 222211 111 12357
Q ss_pred cEEEecCcc--------------------------HHHHHHhcccCCeEEEEcCC
Q 016265 298 DVVYDAIGQ--------------------------CDRAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 298 D~vid~~G~--------------------------~~~~~~~l~~~G~iv~~g~~ 326 (392)
|.++.+.|. .+..+++++++|+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 999988762 23445566778999888754
No 151
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.24 E-value=0.0016 Score=64.02 Aligned_cols=101 Identities=20% Similarity=0.363 Sum_probs=70.8
Q ss_pred HHHHHH-HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCcc
Q 016265 220 TAYEGL-ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFD 298 (392)
Q Consensus 220 ta~~al-~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D 298 (392)
..+..+ +..++++|++||-+| + |.|..+..+++. +|++|+.++.+++.++.+++......++....++.+..+.+|
T Consensus 154 ~k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~-~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l~~~fD 230 (383)
T PRK11705 154 AKLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEH-YGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRDLNGQFD 230 (383)
T ss_pred HHHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhhcCCCCC
Confidence 344433 567889999999998 4 578888999987 599999999999999988764322112222223333345799
Q ss_pred EEEec-----Ccc------HHHHHHhcccCCeEEEE
Q 016265 299 VVYDA-----IGQ------CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 299 ~vid~-----~G~------~~~~~~~l~~~G~iv~~ 323 (392)
.|+.. +|. ++.+.++|+|||+++..
T Consensus 231 ~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~ 266 (383)
T PRK11705 231 RIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLH 266 (383)
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEE
Confidence 88743 331 46788899999998875
No 152
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.23 E-value=0.0035 Score=59.17 Aligned_cols=111 Identities=16% Similarity=0.041 Sum_probs=69.6
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc----CCcE-EEeCCCCccccCCCCccEEEecC
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL----GADL-AIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~----G~~~-vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
..+|++||-+| +|. |.+++.+++. ...+++.++.++..++.+++. +... +............++||+|+...
T Consensus 157 ~~~g~~VLDvG-cGs-G~lai~aa~~-g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVG-CGS-GILSIAALKL-GAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeC-CCh-hHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence 45789999998 666 8888888764 334788888888877766542 3221 11111111111245799999754
Q ss_pred c------cHHHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCccc
Q 016265 305 G------QCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKP 357 (392)
Q Consensus 305 G------~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~ 357 (392)
. .+..+.++|++||+++..+. ......++.+.++++ ++.
T Consensus 234 ~~~~l~~ll~~~~~~LkpgG~li~sgi-------------~~~~~~~v~~~~~~~-f~~ 278 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVKPGGWLILSGI-------------LETQAQSVCDAYEQG-FTV 278 (288)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEeC-------------cHhHHHHHHHHHHcc-Cce
Confidence 3 13677889999999976542 234456666666665 543
No 153
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.23 E-value=0.0033 Score=58.42 Aligned_cols=98 Identities=24% Similarity=0.486 Sum_probs=71.8
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcEEEeCCCCccccCCCCccEE
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADLAIDYTKDNFEDLPEKFDVV 300 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~vi~~~~~~~~~~~~~~D~v 300 (392)
+++.++++|++||=+| + |=|.+++.+|+. +|++|+.++-|+++.+.++ +.|...-+...-.++.+..+.||-|
T Consensus 65 ~~kl~L~~G~~lLDiG-C-GWG~l~~~aA~~-y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~fDrI 141 (283)
T COG2230 65 LEKLGLKPGMTLLDIG-C-GWGGLAIYAAEE-YGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPFDRI 141 (283)
T ss_pred HHhcCCCCCCEEEEeC-C-ChhHHHHHHHHH-cCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccccccccccee
Confidence 3789999999999997 4 458899999998 6999999999999887764 4564422222223444455568887
Q ss_pred Ee-----cCcc------HHHHHHhcccCCeEEEEcC
Q 016265 301 YD-----AIGQ------CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 301 id-----~~G~------~~~~~~~l~~~G~iv~~g~ 325 (392)
+. .+|. +..+.++|++||+++...-
T Consensus 142 vSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I 177 (283)
T COG2230 142 VSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSI 177 (283)
T ss_pred eehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEe
Confidence 63 3452 4788889999999987643
No 154
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.17 E-value=0.088 Score=49.82 Aligned_cols=167 Identities=17% Similarity=0.166 Sum_probs=96.2
Q ss_pred eEEEEEeCCCCCCCCCCCEEEeccccccc----CCC--------------CCCCcceeEEEecCCceeeCCCCCCHHhHh
Q 016265 151 AGVVVKVGTQVKEFKEGDEVYGDINEKAL----EGP--------------KQFGSLAEYTAVEERLLAPKPKNLDFVQAA 212 (392)
Q Consensus 151 ~G~V~~vG~~v~~~~vGdrV~~~~~~~~~----~~~--------------~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa 212 (392)
.++|++ |.+.++.+|.||+++.+.... -+. ...-.|-+|.++..+..+. -+.+..-
T Consensus 38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~----~~~e~~~ 111 (314)
T PF11017_consen 38 FATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD----PEREDWQ 111 (314)
T ss_pred EEEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC----cchhHHH
Confidence 367776 889999999999997652111 000 0112344555544433221 1223333
Q ss_pred ccchhH-HHHHHHHH---hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcC-CcEEEeCCC
Q 016265 213 GLPLAI-ETAYEGLE---RTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLG-ADLAIDYTK 287 (392)
Q Consensus 213 ~l~~~~-~ta~~al~---~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G-~~~vi~~~~ 287 (392)
++.-++ .|.|..-+ ..+.-..+.|+|..|++-.++..+.+++...+...++...|....++.+.+| .|.++.|++
T Consensus 112 ~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd~ 191 (314)
T PF11017_consen 112 MLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGCYDEVLTYDD 191 (314)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCCceEEeehhh
Confidence 332232 34443222 1223445788999999999999888887223555555556667778999999 688888865
Q ss_pred CccccC-CCCccEEEecCcc---HHHHHHhcccCC-eEEEEcC
Q 016265 288 DNFEDL-PEKFDVVYDAIGQ---CDRAVKAIKEGG-TVVALTG 325 (392)
Q Consensus 288 ~~~~~~-~~~~D~vid~~G~---~~~~~~~l~~~G-~iv~~g~ 325 (392)
-+ ++ ...--+++|..|. ...+.+.++..= ..+.+|.
T Consensus 192 i~--~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~ 232 (314)
T PF11017_consen 192 ID--SLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGA 232 (314)
T ss_pred hh--hccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEc
Confidence 32 22 2345688899984 345555554433 3444443
No 155
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.14 E-value=0.0073 Score=52.42 Aligned_cols=114 Identities=24% Similarity=0.275 Sum_probs=75.8
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcEE--EeCCCCcc-ccCCCCcc
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADLA--IDYTKDNF-EDLPEKFD 298 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~v--i~~~~~~~-~~~~~~~D 298 (392)
.+.++++|+.++=+| +| .|..++++|+.--..+++++++++++.+.. ++||.+.+ +..+.... .+.. .+|
T Consensus 28 s~L~~~~g~~l~DIG-aG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~d 104 (187)
T COG2242 28 SKLRPRPGDRLWDIG-AG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPD 104 (187)
T ss_pred HhhCCCCCCEEEEeC-CC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCC
Confidence 466889999887777 43 478888888553356899999998887765 46887643 33222221 2222 689
Q ss_pred EEEecCc-c----HHHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCc
Q 016265 299 VVYDAIG-Q----CDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKV 355 (392)
Q Consensus 299 ~vid~~G-~----~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l 355 (392)
.+|---| . ++.++..|++|||+|.-. ..-+.+..+++++++...
T Consensus 105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~na-------------itlE~~~~a~~~~~~~g~ 153 (187)
T COG2242 105 AIFIGGGGNIEEILEAAWERLKPGGRLVANA-------------ITLETLAKALEALEQLGG 153 (187)
T ss_pred EEEECCCCCHHHHHHHHHHHcCcCCeEEEEe-------------ecHHHHHHHHHHHHHcCC
Confidence 9886533 2 589999999999997432 234555666666666444
No 156
>PRK14967 putative methyltransferase; Provisional
Probab=97.12 E-value=0.014 Score=52.88 Aligned_cols=129 Identities=23% Similarity=0.317 Sum_probs=79.3
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHh----cCCcE-EEeCCCCccccCCCCcc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKS----LGADL-AIDYTKDNFEDLPEKFD 298 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~----~G~~~-vi~~~~~~~~~~~~~~D 298 (392)
+....++++++||-.| +|. |..++.+++. ++ +++.++.++..++.+++ .|... +++.+-... ...+.||
T Consensus 29 l~~~~~~~~~~vLDlG-cG~-G~~~~~la~~--~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD 103 (223)
T PRK14967 29 LAAEGLGPGRRVLDLC-TGS-GALAVAAAAA--GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFD 103 (223)
T ss_pred HHhcccCCCCeEEEec-CCH-HHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCee
Confidence 4455678899999998 665 9999998874 55 78888888877765543 34332 222211111 1134799
Q ss_pred EEEecCc------------------------------cHHHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHH
Q 016265 299 VVYDAIG------------------------------QCDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNP 348 (392)
Q Consensus 299 ~vid~~G------------------------------~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~ 348 (392)
+|+...+ -+..+.+.|++||+++.+.... ..+.++++
T Consensus 104 ~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~-------------~~~~~~~~ 170 (223)
T PRK14967 104 VVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSEL-------------SGVERTLT 170 (223)
T ss_pred EEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecc-------------cCHHHHHH
Confidence 9986421 0245778999999988652211 12345666
Q ss_pred HHHCCCcccccCCCcccchhhHH
Q 016265 349 YLESGKVKPIIDPKGPFPFSQVV 371 (392)
Q Consensus 349 ~l~~g~l~~~~~~t~~~~l~~~~ 371 (392)
+++.+.+.......+.+++....
T Consensus 171 ~l~~~g~~~~~~~~~~~~~~~~~ 193 (223)
T PRK14967 171 RLSEAGLDAEVVASQWIPFGPVL 193 (223)
T ss_pred HHHHCCCCeEEEEeeccCccHHH
Confidence 77766665544444556665543
No 157
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.07 E-value=0.0018 Score=56.77 Aligned_cols=73 Identities=16% Similarity=0.300 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcC---CcEEEeCCCCc----ccc----CCCCccEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLG---ADLAIDYTKDN----FED----LPEKFDVV 300 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G---~~~vi~~~~~~----~~~----~~~~~D~v 300 (392)
-|.+|||+||++|+|+..++-...+ |-+||++-+++++++.++..- ...+.|..+.+ +.+ .-...+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 4789999999999999988877775 999999999999999987644 23344543332 111 12357888
Q ss_pred EecCc
Q 016265 301 YDAIG 305 (392)
Q Consensus 301 id~~G 305 (392)
+++.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 88887
No 158
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.05 E-value=0.0041 Score=49.42 Aligned_cols=89 Identities=30% Similarity=0.408 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc----CCcEEEeCCCCcc---ccCCCCccEEEecC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL----GADLAIDYTKDNF---EDLPEKFDVVYDAI 304 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~----G~~~vi~~~~~~~---~~~~~~~D~vid~~ 304 (392)
||++||-+| + +.|..++.+++...+++++.++.+++-++.+++. +...-+.....++ .+..++||+|+...
T Consensus 1 p~~~vLDlG-c-G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLG-C-GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEET-T-TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEc-C-cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence 688999997 4 4499999999854689999999999888777542 2211111111222 33456799999876
Q ss_pred -c------c------HHHHHHhcccCCeEEE
Q 016265 305 -G------Q------CDRAVKAIKEGGTVVA 322 (392)
Q Consensus 305 -G------~------~~~~~~~l~~~G~iv~ 322 (392)
. . ++.+.+.|+|||+++.
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 2 1 4678889999999875
No 159
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.00 E-value=0.0011 Score=55.23 Aligned_cols=91 Identities=23% Similarity=0.326 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHH-HhcCCc--EEEeCCCCccccCCCCccEEEecCcc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFL-KSLGAD--LAIDYTKDNFEDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~-~~~G~~--~vi~~~~~~~~~~~~~~D~vid~~G~ 306 (392)
-.+.+|+|+| +|++|.+++..+... |++ ++++.++.+|.+.+ +.++.. .++++++ ..+....+|+||+|++.
T Consensus 10 l~~~~vlviG-aGg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~--~~~~~~~~DivI~aT~~ 85 (135)
T PF01488_consen 10 LKGKRVLVIG-AGGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEFGGVNIEAIPLED--LEEALQEADIVINATPS 85 (135)
T ss_dssp GTTSEEEEES-SSHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG--HCHHHHTESEEEE-SST
T ss_pred cCCCEEEEEC-CHHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHcCccccceeeHHH--HHHHHhhCCeEEEecCC
Confidence 3588999998 899999999988884 887 77778888886655 455322 2333322 22233579999999873
Q ss_pred -----HHHHHHhcccC-CeEEEEcC
Q 016265 307 -----CDRAVKAIKEG-GTVVALTG 325 (392)
Q Consensus 307 -----~~~~~~~l~~~-G~iv~~g~ 325 (392)
....++...+. +.++.++.
T Consensus 86 ~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 86 GMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp TSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred CCcccCHHHHHHHHhhhhceecccc
Confidence 13443333322 46666654
No 160
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.96 E-value=0.008 Score=57.51 Aligned_cols=96 Identities=24% Similarity=0.312 Sum_probs=66.9
Q ss_pred HHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC--eEEEEeCCcccHHHHH----hcCCcEEEeCCCCcccc---CC
Q 016265 224 GLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA--SRVAATSSTRNLEFLK----SLGADLAIDYTKDNFED---LP 294 (392)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~--~vv~~~~~~~~~~~~~----~~G~~~vi~~~~~~~~~---~~ 294 (392)
.++...++++++||.+| +| .|..++.+++.. +. .++.++.+++..+.++ +.|.+.+..... +..+ ..
T Consensus 72 ll~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~-~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~ 147 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIG-GG-TGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEF 147 (322)
T ss_pred HHHhcCCCCCCEEEEEe-CC-ccHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-Chhhccccc
Confidence 34556788999999998 65 599999999874 53 5888888887665554 466654332211 1111 12
Q ss_pred CCccEEEecCcc---HHHHHHhcccCCeEEEE
Q 016265 295 EKFDVVYDAIGQ---CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 295 ~~~D~vid~~G~---~~~~~~~l~~~G~iv~~ 323 (392)
..+|+|+.+.|. .+..++.|++||+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 469999998772 46788999999998764
No 161
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.94 E-value=0.0052 Score=62.82 Aligned_cols=79 Identities=23% Similarity=0.194 Sum_probs=54.6
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh---------cCC-----cEE--EeCCC-C
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS---------LGA-----DLA--IDYTK-D 288 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~---------~G~-----~~v--i~~~~-~ 288 (392)
...+.+.|++|||+||+|++|...++.+.. .|.+|++++++.++++.+.+ .|. ..+ .|..+ +
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk-~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 356678899999999999999998887766 49999999998877654321 121 112 23322 1
Q ss_pred ccccCCCCccEEEecCc
Q 016265 289 NFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 289 ~~~~~~~~~D~vid~~G 305 (392)
.+.+..+++|+||.+.|
T Consensus 152 sI~~aLggiDiVVn~AG 168 (576)
T PLN03209 152 QIGPALGNASVVICCIG 168 (576)
T ss_pred HHHHHhcCCCEEEEccc
Confidence 23333468999999987
No 162
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0061 Score=57.02 Aligned_cols=73 Identities=18% Similarity=0.317 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE-EeCCCCc-c----cc----CCCCccEEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA-IDYTKDN-F----ED----LPEKFDVVY 301 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v-i~~~~~~-~----~~----~~~~~D~vi 301 (392)
.+.+|+|+||+|++|...++.+.. .|++|+++++++++++.+.+.+.+.+ .|..+.. + .+ ..+.+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~-~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQS-DGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 467899999999999998887766 59999999998888877776665432 3443321 1 11 124689999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9875
No 163
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.93 E-value=0.0022 Score=56.02 Aligned_cols=107 Identities=21% Similarity=0.263 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc----
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ---- 306 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~---- 306 (392)
-.|.+|.|+| .|.+|+..++.++. +|++|++.+++..........+... .++.+.-+..|+|+.+...
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~~~~~~~~~~~~~------~~l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKA-FGMRVIGYDRSPKPEEGADEFGVEY------VSLDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHH-TT-EEEEEESSCHHHHHHHHTTEEE------SSHHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeec-CCceeEEecccCChhhhccccccee------eehhhhcchhhhhhhhhcccccc
Confidence 3589999998 99999999999998 6999999999877665455555321 1334444568999988651
Q ss_pred ---H-HHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCccc
Q 016265 307 ---C-DRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKP 357 (392)
Q Consensus 307 ---~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~ 357 (392)
+ ...++.|++|..+|.++-.. --+-+.+++.+++|++..
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG~------------~vde~aL~~aL~~g~i~g 148 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARGE------------LVDEDALLDALESGKIAG 148 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSGG------------GB-HHHHHHHHHTTSEEE
T ss_pred ceeeeeeeeeccccceEEEeccchh------------hhhhhHHHHHHhhccCce
Confidence 1 78899999999988765321 012356788999999873
No 164
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0066 Score=56.57 Aligned_cols=71 Identities=20% Similarity=0.287 Sum_probs=51.3
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE-EeCCCCc-ccc-------CCCCccEEEecC
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA-IDYTKDN-FED-------LPEKFDVVYDAI 304 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v-i~~~~~~-~~~-------~~~~~D~vid~~ 304 (392)
.++||+||+|++|...++.+.. .|++|++++++.++.+.+.+.+...+ .|..+.. +.+ ..+++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKA-AGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4799999999999998888776 49999999988877777666564432 3543321 111 124689999998
Q ss_pred c
Q 016265 305 G 305 (392)
Q Consensus 305 G 305 (392)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 7
No 165
>PRK12742 oxidoreductase; Provisional
Probab=96.93 E-value=0.0078 Score=54.58 Aligned_cols=73 Identities=27% Similarity=0.369 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC-CcccHHHH-HhcCCcEE-EeCCCCc-ccc---CCCCccEEEecC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATS-STRNLEFL-KSLGADLA-IDYTKDN-FED---LPEKFDVVYDAI 304 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~-~~~~~~~~-~~~G~~~v-i~~~~~~-~~~---~~~~~D~vid~~ 304 (392)
.|++|||+||+|++|...++.+.. .|++++++.+ ++++.+.+ .+++...+ .|..+.. +.+ ...++|++|++.
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~-~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVT-DGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 478999999999999998887776 4998887654 44444443 44554432 2332211 111 124689999987
Q ss_pred c
Q 016265 305 G 305 (392)
Q Consensus 305 G 305 (392)
|
T Consensus 84 g 84 (237)
T PRK12742 84 G 84 (237)
T ss_pred C
Confidence 6
No 166
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.92 E-value=0.0028 Score=57.25 Aligned_cols=73 Identities=29% Similarity=0.424 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCC----cEEEeCCCC-cc-------ccCCCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGA----DLAIDYTKD-NF-------EDLPEKFD 298 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~----~~vi~~~~~-~~-------~~~~~~~D 298 (392)
.++.++|+||++|+|.+.++.... .|++++.+.+..+|++.+. +++. ...+|-.+. .. .+.-+.+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~-~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAE-AGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHH-CCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 457899999999999999988877 4999999999999988774 6773 123343332 11 11134699
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
++++..|
T Consensus 84 iLvNNAG 90 (246)
T COG4221 84 ILVNNAG 90 (246)
T ss_pred EEEecCC
Confidence 9999988
No 167
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.76 E-value=0.0053 Score=56.74 Aligned_cols=75 Identities=25% Similarity=0.386 Sum_probs=51.7
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hc----CCc-EEE--eCCCCc-ccc----C---
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SL----GAD-LAI--DYTKDN-FED----L--- 293 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~----G~~-~vi--~~~~~~-~~~----~--- 293 (392)
...+.+++|+||++|+|...+..... .|.+++.+.++++|++.+. ++ |.. .++ |..+.+ ... +
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~-~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLAR-RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 34678999999999999886655444 5999999999999987763 32 322 233 333322 111 1
Q ss_pred CCCccEEEecCc
Q 016265 294 PEKFDVVYDAIG 305 (392)
Q Consensus 294 ~~~~D~vid~~G 305 (392)
...+|+.+++.|
T Consensus 82 ~~~IdvLVNNAG 93 (265)
T COG0300 82 GGPIDVLVNNAG 93 (265)
T ss_pred CCcccEEEECCC
Confidence 236999999987
No 168
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.76 E-value=0.026 Score=45.38 Aligned_cols=96 Identities=18% Similarity=0.279 Sum_probs=64.6
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE--EEeCCCCc-cccCCCCcc
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL--AIDYTKDN-FEDLPEKFD 298 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~--vi~~~~~~-~~~~~~~~D 298 (392)
....+.++++|+-+| +|. |..+..+++...+.+++.++.++...+.++ .++... ++..+-.. .....+.+|
T Consensus 13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 90 (124)
T TIGR02469 13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD 90 (124)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence 445677888999998 655 999999998743467888888888777654 344332 22221111 122345799
Q ss_pred EEEecCc------cHHHHHHhcccCCeEEEE
Q 016265 299 VVYDAIG------QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 299 ~vid~~G------~~~~~~~~l~~~G~iv~~ 323 (392)
+|+...+ .++.+.+.|++||+++.-
T Consensus 91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred EEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 9997643 257899999999998754
No 169
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.75 E-value=0.011 Score=55.14 Aligned_cols=94 Identities=28% Similarity=0.465 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCCcHHHH-HHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE----eCCCCc-cc-------cC
Q 016265 232 AGKSILVLNGSGGVGSL-VIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI----DYTKDN-FE-------DL 293 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~-aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi----~~~~~~-~~-------~~ 293 (392)
.|..|+|+||++|+|.+ |-++++. |++++.+++..++++.+ ++.+... ++ |-.+.+ .. ..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 57899999999999976 5666763 99999999887776655 4455333 22 222211 11 12
Q ss_pred CCCccEEEecCcc----------------------------HHHHHHhcccC--CeEEEEcCCC
Q 016265 294 PEKFDVVYDAIGQ----------------------------CDRAVKAIKEG--GTVVALTGAV 327 (392)
Q Consensus 294 ~~~~D~vid~~G~----------------------------~~~~~~~l~~~--G~iv~~g~~~ 327 (392)
-+++|+.++..|- ...++..|++. |+||.++.-.
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia 152 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA 152 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence 3579999998771 13455666554 9999886543
No 170
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.75 E-value=0.011 Score=51.32 Aligned_cols=88 Identities=27% Similarity=0.271 Sum_probs=62.6
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCc---cccCCCCccEEEecCcc------
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDN---FEDLPEKFDVVYDAIGQ------ 306 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~---~~~~~~~~D~vid~~G~------ 306 (392)
|+|+||+|.+|...++.+.. .|.+|+++++++++.+. ..+.+ ++..+-.+ +.+...++|+||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~-~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~ 76 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLR-RGHEVTALVRSPSKAED--SPGVE-IIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVD 76 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTSEEEEEESSGGGHHH--CTTEE-EEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHH
T ss_pred eEEECCCChHHHHHHHHHHH-CCCEEEEEecCchhccc--ccccc-cceeeehhhhhhhhhhhhcchhhhhhhhhccccc
Confidence 79999999999999999988 59999999999998777 44443 33322222 33334589999999983
Q ss_pred -HHHHHHhcccCC--eEEEEcCCC
Q 016265 307 -CDRAVKAIKEGG--TVVALTGAV 327 (392)
Q Consensus 307 -~~~~~~~l~~~G--~iv~~g~~~ 327 (392)
....++.++..| +++.++...
T Consensus 77 ~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 77 AAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccceeeeccc
Confidence 355666665544 777776544
No 171
>PRK06182 short chain dehydrogenase; Validated
Probab=96.72 E-value=0.014 Score=54.41 Aligned_cols=73 Identities=25% Similarity=0.334 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcE-EEeCCCCc-ccc-------CCCCccEEEe
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADL-AIDYTKDN-FED-------LPEKFDVVYD 302 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~-vi~~~~~~-~~~-------~~~~~D~vid 302 (392)
.+.+++|+|++|++|...++.+.. .|++|+++++++++++.+...+... ..|..+.. +.+ ...++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~-~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAA-QGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 367899999999999998888766 4999999998888776665555432 23433322 111 1247899999
Q ss_pred cCc
Q 016265 303 AIG 305 (392)
Q Consensus 303 ~~G 305 (392)
+.|
T Consensus 81 ~ag 83 (273)
T PRK06182 81 NAG 83 (273)
T ss_pred CCC
Confidence 987
No 172
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.71 E-value=0.0044 Score=57.67 Aligned_cols=90 Identities=27% Similarity=0.370 Sum_probs=70.7
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cCCc-EEEeCCCCccccCCCCccEEEecC---c---
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LGAD-LAIDYTKDNFEDLPEKFDVVYDAI---G--- 305 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~-~vi~~~~~~~~~~~~~~D~vid~~---G--- 305 (392)
..|.|+| .|-+|.-++.+|-.+ |++|.+.+.+.+|+..+.. ++.+ +++-....++++...+.|++|.++ |
T Consensus 169 ~kv~iiG-GGvvgtnaAkiA~gl-gA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka 246 (371)
T COG0686 169 AKVVVLG-GGVVGTNAAKIAIGL-GADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA 246 (371)
T ss_pred ccEEEEC-CccccchHHHHHhcc-CCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence 3577777 899999999999985 9999999999999999875 4444 333334455666677899999884 3
Q ss_pred ---cHHHHHHhcccCCeEEEEcC
Q 016265 306 ---QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 306 ---~~~~~~~~l~~~G~iv~~g~ 325 (392)
..++.++.|+||+.+|++..
T Consensus 247 PkLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 247 PKLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred ceehhHHHHHhcCCCcEEEEEEE
Confidence 25899999999999998843
No 173
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.66 E-value=0.013 Score=52.43 Aligned_cols=101 Identities=23% Similarity=0.240 Sum_probs=63.6
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC--eEEEEeCCcccHHHH----HhcCCcEE--EeCCCCccccC
Q 016265 222 YEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA--SRVAATSSTRNLEFL----KSLGADLA--IDYTKDNFEDL 293 (392)
Q Consensus 222 ~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~--~vv~~~~~~~~~~~~----~~~G~~~v--i~~~~~~~~~~ 293 (392)
...++...+++|++||-+| +|.|..++-+|+.. |. +|+.++..++-.+.+ +++|.+.+ +..+...-...
T Consensus 62 a~~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lv-g~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~ 138 (209)
T PF01135_consen 62 ARMLEALDLKPGDRVLEIG--TGSGYQAALLAHLV-GPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPE 138 (209)
T ss_dssp HHHHHHTTC-TT-EEEEES---TTSHHHHHHHHHH-STTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGG
T ss_pred HHHHHHHhcCCCCEEEEec--CCCcHHHHHHHHhc-CccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcccc
Confidence 3455677899999999997 45588888888875 64 467777666544443 44565432 22221111112
Q ss_pred CCCccEEEecCc--c-HHHHHHhcccCCeEEEEcC
Q 016265 294 PEKFDVVYDAIG--Q-CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 294 ~~~~D~vid~~G--~-~~~~~~~l~~~G~iv~~g~ 325 (392)
...||.++-+.+ . ....++.|++||++|..-.
T Consensus 139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 347999998776 2 4789999999999988533
No 174
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.55 E-value=0.018 Score=52.51 Aligned_cols=99 Identities=24% Similarity=0.375 Sum_probs=70.0
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCcEEEeCCCCccccC---CCCcc
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGADLAIDYTKDNFEDL---PEKFD 298 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~~vi~~~~~~~~~~---~~~~D 298 (392)
......+|++||=. ++|.|-+|..+++....+++++++.++.-++.+++ .|... +.+-..+..++ ...||
T Consensus 45 ~~~~~~~g~~vLDv--a~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LPf~D~sFD 121 (238)
T COG2226 45 SLLGIKPGDKVLDV--ACGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLPFPDNSFD 121 (238)
T ss_pred HhhCCCCCCEEEEe--cCCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCCCCCCccC
Confidence 34556689999987 46789999999998644689999999988877754 23221 22222222222 34799
Q ss_pred EEEecCc---------cHHHHHHhcccCCeEEEEcCCC
Q 016265 299 VVYDAIG---------QCDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 299 ~vid~~G---------~~~~~~~~l~~~G~iv~~g~~~ 327 (392)
+|.-+.| .+.++.+.|+|||+++.+....
T Consensus 122 ~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 122 AVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred EEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 9988877 1578999999999998875543
No 175
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.52 E-value=0.02 Score=48.82 Aligned_cols=90 Identities=18% Similarity=0.242 Sum_probs=62.3
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc---
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ--- 306 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~--- 306 (392)
.-.|++++|.| -|-+|.-.++.++.+ |++|++++..+-+.-.+..-|.... ...+..+..|++|.++|.
T Consensus 20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~~dGf~v~------~~~~a~~~adi~vtaTG~~~v 91 (162)
T PF00670_consen 20 MLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAAMDGFEVM------TLEEALRDADIFVTATGNKDV 91 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHHHTT-EEE-------HHHHTTT-SEEEE-SSSSSS
T ss_pred eeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhhhcCcEec------CHHHHHhhCCEEEECCCCccc
Confidence 46799999998 999999999999995 9999999998887777766676432 234445678999999993
Q ss_pred -HHHHHHhcccCCeEEEEcCCC
Q 016265 307 -CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 307 -~~~~~~~l~~~G~iv~~g~~~ 327 (392)
..+-++.|+++..+...|...
T Consensus 92 i~~e~~~~mkdgail~n~Gh~d 113 (162)
T PF00670_consen 92 ITGEHFRQMKDGAILANAGHFD 113 (162)
T ss_dssp B-HHHHHHS-TTEEEEESSSST
T ss_pred cCHHHHHHhcCCeEEeccCcCc
Confidence 267888899888777776544
No 176
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.48 E-value=0.065 Score=48.14 Aligned_cols=98 Identities=21% Similarity=0.201 Sum_probs=64.6
Q ss_pred HHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC--CeEEEEeCCcccHHHHHh----cCCcE--EEeCCCCccccCCC
Q 016265 224 GLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFG--ASRVAATSSTRNLEFLKS----LGADL--AIDYTKDNFEDLPE 295 (392)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G--~~vv~~~~~~~~~~~~~~----~G~~~--vi~~~~~~~~~~~~ 295 (392)
.++...+++|++||-+| +|.|..+..+++.. + .+++.++.+++-.+.+++ .|.+. ++..+.........
T Consensus 68 ~~~~l~~~~g~~VLdIG--~GsG~~t~~la~~~-~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~ 144 (212)
T PRK13942 68 MCELLDLKEGMKVLEIG--TGSGYHAAVVAEIV-GKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENA 144 (212)
T ss_pred HHHHcCCCCcCEEEEEC--CcccHHHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCC
Confidence 44566789999999997 45588888888764 4 578888888877666543 45432 22222111111234
Q ss_pred CccEEEecCc---cHHHHHHhcccCCeEEEEc
Q 016265 296 KFDVVYDAIG---QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 296 ~~D~vid~~G---~~~~~~~~l~~~G~iv~~g 324 (392)
.||+|+-... -....++.|++||+++..-
T Consensus 145 ~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 145 PYDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred CcCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 7999875433 2478888999999988753
No 177
>PRK08317 hypothetical protein; Provisional
Probab=96.37 E-value=0.042 Score=49.67 Aligned_cols=98 Identities=22% Similarity=0.284 Sum_probs=65.6
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHh-cCCeEEEEeCCcccHHHHHhc----CCcE-EEeCCCCccccCCCCcc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQV-FGASRVAATSSTRNLEFLKSL----GADL-AIDYTKDNFEDLPEKFD 298 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~-~G~~vv~~~~~~~~~~~~~~~----G~~~-vi~~~~~~~~~~~~~~D 298 (392)
++...+.++++||-+| +|. |..+..+++.. -+.+++.++.++..++.+++. +... ++..+..........+|
T Consensus 12 ~~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 89 (241)
T PRK08317 12 FELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFD 89 (241)
T ss_pred HHHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCce
Confidence 4567888999999998 655 88999999873 135788889898888877654 1111 11111111111234689
Q ss_pred EEEecCc---------cHHHHHHhcccCCeEEEEc
Q 016265 299 VVYDAIG---------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 299 ~vid~~G---------~~~~~~~~l~~~G~iv~~g 324 (392)
+|+.... .+..+.++|++||.++...
T Consensus 90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 8885421 2578889999999998764
No 178
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.015 Score=52.87 Aligned_cols=73 Identities=30% Similarity=0.413 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCcEE-EeCCCCc-ccc---CCCCccEEEecCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGADLA-IDYTKDN-FED---LPEKFDVVYDAIG 305 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~~v-i~~~~~~-~~~---~~~~~D~vid~~G 305 (392)
.+.+++|+|++|++|...++.+.. .|.+++++.++.++.+.+. ..+...+ .|..+.. ..+ ...++|++|++.|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQ-RGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 568999999999999999998877 5999999888877765554 3443322 2433321 111 1246899999876
No 179
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.038 Score=51.26 Aligned_cols=42 Identities=24% Similarity=0.301 Sum_probs=34.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.|+++||+||++++|.+.++.+.. .|++|++++++.++++.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~ 48 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLAR-AGADVILLSRNEENLKKA 48 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 478999999999999998887766 499999998887765544
No 180
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.27 E-value=0.015 Score=51.46 Aligned_cols=73 Identities=26% Similarity=0.310 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hc----CCcEE-EeCCC-CccccCCCCccEEEecC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SL----GADLA-IDYTK-DNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~----G~~~v-i~~~~-~~~~~~~~~~D~vid~~ 304 (392)
.+.+++|+||+|++|...+..+.. .|++++++.++.++.+.+. ++ +.... .+..+ ++..+...++|+||.++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~-~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAR-EGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 578999999889999887777766 5888888888877765543 22 32211 12221 22223345789999987
Q ss_pred c
Q 016265 305 G 305 (392)
Q Consensus 305 G 305 (392)
.
T Consensus 106 ~ 106 (194)
T cd01078 106 A 106 (194)
T ss_pred C
Confidence 6
No 181
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.015 Score=56.02 Aligned_cols=73 Identities=23% Similarity=0.416 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcEE---EeCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADLA---IDYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~v---i~~~~~~-~~~-------~~~~ 296 (392)
.+++|+|+||+|++|.+.++.+.. .|++++++.+++++++.+ ++.|.+.. .|..+.+ +.+ ..++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~-~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFAR-RGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 568999999999999998887777 599999999888876543 34565432 2333221 111 1257
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|++.|
T Consensus 85 iD~lVnnAG 93 (330)
T PRK06139 85 IDVWVNNVG 93 (330)
T ss_pred CCEEEECCC
Confidence 899999987
No 182
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.26 E-value=0.029 Score=49.36 Aligned_cols=92 Identities=27% Similarity=0.391 Sum_probs=60.6
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE--EEeCCCCccccCCCCccEEEec
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL--AIDYTKDNFEDLPEKFDVVYDA 303 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~--vi~~~~~~~~~~~~~~D~vid~ 303 (392)
++++.+||-+| + |.|..++.+++...+++++.++.+++..+.++ +.|.+. ++..+-.++.. .+.+|+|+-.
T Consensus 43 l~~g~~VLDiG-c-GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~ 119 (187)
T PRK00107 43 LPGGERVLDVG-S-GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSR 119 (187)
T ss_pred cCCCCeEEEEc-C-CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEc
Confidence 45689999997 4 34777777776544678999999887766654 455443 22222122222 4579999964
Q ss_pred C-cc----HHHHHHhcccCCeEEEEc
Q 016265 304 I-GQ----CDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 304 ~-G~----~~~~~~~l~~~G~iv~~g 324 (392)
. +. ++.+.++|++||+++.+-
T Consensus 120 ~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 120 AVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred cccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 2 22 467889999999998773
No 183
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.047 Score=50.44 Aligned_cols=73 Identities=25% Similarity=0.255 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcE-E--EeCCCCc-ccc-------CCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADL-A--IDYTKDN-FED-------LPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~-v--i~~~~~~-~~~-------~~~~~D~ 299 (392)
.+.+++|+||+|++|...+..+.. .|++|++++++.++.+.+ ++++... . .|..+.. +.+ .-+.+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVA-AGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 467999999999999998887766 499999999887765544 3445321 2 2332221 111 1246899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 84 lv~~ag 89 (261)
T PRK08265 84 LVNLAC 89 (261)
T ss_pred EEECCC
Confidence 998876
No 184
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.04 Score=53.18 Aligned_cols=73 Identities=18% Similarity=0.224 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcEE---EeCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADLA---IDYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~v---i~~~~~~-~~~-------~~~~ 296 (392)
.+.+|+|+||+|++|...++.+.. .|++++++.+++++++.+ ++.|.... .|..+.. +.+ .-.+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~-~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFAR-RGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 467999999999999998887766 499999999887766543 34454332 2333321 111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|++.|
T Consensus 86 iD~lInnAg 94 (334)
T PRK07109 86 IDTWVNNAM 94 (334)
T ss_pred CCEEEECCC
Confidence 899999877
No 185
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.18 E-value=0.085 Score=47.11 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=64.1
Q ss_pred HHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHH----hcCCc---EEEeCCCCccccCCC
Q 016265 224 GLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLK----SLGAD---LAIDYTKDNFEDLPE 295 (392)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~----~~G~~---~vi~~~~~~~~~~~~ 295 (392)
.++...+++|++||=+| + |.|..++.+++.+. +.+++.++.+++-.+.++ +.|.. .++..+.........
T Consensus 64 ~~~~l~~~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~ 141 (205)
T PRK13944 64 MCELIEPRPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHA 141 (205)
T ss_pred HHHhcCCCCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCC
Confidence 34566788999999997 4 55888888887642 357888888877665554 34532 223322211111234
Q ss_pred CccEEEecCc--c-HHHHHHhcccCCeEEEE
Q 016265 296 KFDVVYDAIG--Q-CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 296 ~~D~vid~~G--~-~~~~~~~l~~~G~iv~~ 323 (392)
.||+|+-+.. . .+.+++.|++||+++..
T Consensus 142 ~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 142 PFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred CccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 7999986644 2 37888999999998764
No 186
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.18 E-value=0.019 Score=53.47 Aligned_cols=74 Identities=20% Similarity=0.434 Sum_probs=48.5
Q ss_pred CCCCCeEEEEcCCCcHHHH-HHHHHHHhcCCeEEEEeCCcc----cHHHHHhcCCc--EEEeCCC-Ccc-------ccCC
Q 016265 230 FSAGKSILVLNGSGGVGSL-VIQLAKQVFGASRVAATSSTR----NLEFLKSLGAD--LAIDYTK-DNF-------EDLP 294 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~-aiqlak~~~G~~vv~~~~~~~----~~~~~~~~G~~--~vi~~~~-~~~-------~~~~ 294 (392)
--.|+.|||+||++|+|.+ |.++||. |+++++.+.+.+ ..+..++.|-. .+.|-.+ ++. ++..
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 3479999999999999976 6667774 888878776444 23444555622 2334332 222 1224
Q ss_pred CCccEEEecCc
Q 016265 295 EKFDVVYDAIG 305 (392)
Q Consensus 295 ~~~D~vid~~G 305 (392)
+.+|++++..|
T Consensus 113 G~V~ILVNNAG 123 (300)
T KOG1201|consen 113 GDVDILVNNAG 123 (300)
T ss_pred CCceEEEeccc
Confidence 57999999988
No 187
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.021 Score=52.52 Aligned_cols=73 Identities=18% Similarity=0.307 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCc-EEEeCCCCc-ccc-------CCCCccEEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGAD-LAIDYTKDN-FED-------LPEKFDVVY 301 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~-~vi~~~~~~-~~~-------~~~~~D~vi 301 (392)
.|++|+|+||+|++|...++.... .|++++++++++.+.+.. ++++.. ...|..+.. +.+ ...++|++|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAA-EGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999999999999998888776 599999998877765544 344432 222433321 111 124689999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
.+.|
T Consensus 85 ~~ag 88 (255)
T PRK06057 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 8876
No 188
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.016 Score=54.85 Aligned_cols=73 Identities=25% Similarity=0.304 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCC--cE-E--EeCCCCc-ccc-------CCCCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGA--DL-A--IDYTKDN-FED-------LPEKF 297 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~--~~-v--i~~~~~~-~~~-------~~~~~ 297 (392)
.|+++||+||+|++|...++.+.. .|++++++.+++++++.+ ++++. +. . .|..+.. ..+ ..+++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHA-RGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999888877 599999999888776554 44542 11 1 2333211 111 12468
Q ss_pred cEEEecCc
Q 016265 298 DVVYDAIG 305 (392)
Q Consensus 298 D~vid~~G 305 (392)
|++|++.|
T Consensus 87 d~vI~nAG 94 (296)
T PRK05872 87 DVVVANAG 94 (296)
T ss_pred CEEEECCC
Confidence 99999987
No 189
>PRK07574 formate dehydrogenase; Provisional
Probab=96.14 E-value=0.046 Score=53.60 Aligned_cols=106 Identities=20% Similarity=0.204 Sum_probs=73.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|+..++.++. +|.++++.++.....+..+.+|... ..++.++....|+|+-+...
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~-fG~~V~~~dr~~~~~~~~~~~g~~~-----~~~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKP-FDVKLHYTDRHRLPEEVEQELGLTY-----HVSFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCCchhhHhhcCcee-----cCCHHHHhhcCCEEEEcCCCCHHHH
Confidence 578999998 99999999999998 6999999988654444445555421 12345555678999988761
Q ss_pred --H-HHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCcc
Q 016265 307 --C-DRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
+ ...+..|++|..+|.++... --+-+.+.+.+++|++.
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aRG~------------iVDe~AL~~AL~sG~i~ 304 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTARGK------------IVDRDAVVRALESGHLA 304 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCCCc------------hhhHHHHHHHHHhCCcc
Confidence 1 56788899998888765322 11234555666666654
No 190
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.13 E-value=0.012 Score=52.97 Aligned_cols=87 Identities=33% Similarity=0.474 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCcEEEeCCCCccccC---CCCccEEEec
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGADLAIDYTKDNFEDL---PEKFDVVYDA 303 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~~vi~~~~~~~~~~---~~~~D~vid~ 303 (392)
-+|.+||=.| +|+ |+++.-+|+. |++|..++.+++-.+.++. -|.. +||.....+++ .+.||+|+..
T Consensus 58 l~g~~vLDvG-CGg-G~Lse~mAr~--Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cm 131 (243)
T COG2227 58 LPGLRVLDVG-CGG-GILSEPLARL--GASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCM 131 (243)
T ss_pred CCCCeEEEec-CCc-cHhhHHHHHC--CCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEh
Confidence 4788898887 443 7999999984 9999999999998888763 2332 56766554443 4689999854
Q ss_pred -----Ccc----HHHHHHhcccCCeEEEE
Q 016265 304 -----IGQ----CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 304 -----~G~----~~~~~~~l~~~G~iv~~ 323 (392)
+.. +..+.++++|+|.++.-
T Consensus 132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 132 EVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred hHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 221 46799999999997643
No 191
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.057 Score=49.18 Aligned_cols=73 Identities=23% Similarity=0.293 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcE-EE--eCCCCc-c-------ccCCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADL-AI--DYTKDN-F-------EDLPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~-vi--~~~~~~-~-------~~~~~~~D~ 299 (392)
+|.+|+|+||+|++|...++.+.. .|++++++.+++++.+.+ +++|... .+ |..+.. . .+...++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLA-EGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 467999999999999998887766 599998888876665444 4555432 22 222211 1 111246899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 84 vi~~ag 89 (249)
T PRK06500 84 VFINAG 89 (249)
T ss_pred EEECCC
Confidence 998876
No 192
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.10 E-value=0.025 Score=53.99 Aligned_cols=90 Identities=21% Similarity=0.278 Sum_probs=60.8
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEE-eCCC-CccccCCCCccEEEecCcc------
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAI-DYTK-DNFEDLPEKFDVVYDAIGQ------ 306 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi-~~~~-~~~~~~~~~~D~vid~~G~------ 306 (392)
+|+|+||+|-+|...+..+.. .|.+|++++++.++...+...|.+.+. |..+ ..+.+.-+++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~-~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALD-EGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHH-CCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 699999999999998887777 499999999887666555555654332 3322 2233445689999998651
Q ss_pred ---------HHHHHHhcccCC--eEEEEcC
Q 016265 307 ---------CDRAVKAIKEGG--TVVALTG 325 (392)
Q Consensus 307 ---------~~~~~~~l~~~G--~iv~~g~ 325 (392)
...++++++..| +++.++.
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 123455555444 7887765
No 193
>PLN03139 formate dehydrogenase; Provisional
Probab=96.10 E-value=0.043 Score=53.83 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=74.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...++.++. +|.++++.+++....+..++.|+..+ .++.++....|+|+.++..
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~a-fG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKP-FNCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHH-CCCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhhCCEEEEeCCCCHHHH
Confidence 578999998 99999999999998 69999888876555555555664321 2345555678999988751
Q ss_pred --H-HHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCcc
Q 016265 307 --C-DRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
+ ...++.|++|..+|.++-.. --+-+.+.+.+++|++.
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aRG~------------iVDe~AL~~AL~sG~l~ 311 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNARGA------------IMDTQAVADACSSGHIG 311 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCCCc------------hhhHHHHHHHHHcCCce
Confidence 1 56888999998888765322 11234566667777664
No 194
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.09 E-value=0.021 Score=49.28 Aligned_cols=90 Identities=21% Similarity=0.273 Sum_probs=62.4
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCC--cEEEeCCCCccccCCCCccEEEecCcc------
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGA--DLAIDYTKDNFEDLPEKFDVVYDAIGQ------ 306 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~--~~vi~~~~~~~~~~~~~~D~vid~~G~------ 306 (392)
.|.|+||+|-+|...++=|+. .|-.|.++++++.|....+..-+ ..++|... ..+...|+|+||++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~-RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~--~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALK-RGHEVTAIVRNASKLAARQGVTILQKDIFDLTS--LASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred eEEEEecCchhHHHHHHHHHh-CCCeeEEEEeChHhccccccceeecccccChhh--hHhhhcCCceEEEeccCCCCChh
Confidence 588999999999999999998 59999999999988765422110 11222211 23345699999999872
Q ss_pred ------HHHHHHhcccC--CeEEEEcCCC
Q 016265 307 ------CDRAVKAIKEG--GTVVALTGAV 327 (392)
Q Consensus 307 ------~~~~~~~l~~~--G~iv~~g~~~ 327 (392)
.+.++..|+.- -|+..+|+..
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 13466666663 4788887765
No 195
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.026 Score=51.86 Aligned_cols=43 Identities=35% Similarity=0.395 Sum_probs=36.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
-.+++|+|+||+|++|...+..+.. .|++|+++.+++++++.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~-~G~~Vi~~~r~~~~~~~~ 49 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQ-AGAKVVLASRRVERLKEL 49 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 4578999999999999998888877 599999998887776544
No 196
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.02 E-value=0.07 Score=48.62 Aligned_cols=42 Identities=24% Similarity=0.287 Sum_probs=34.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.+.++||+||+|++|...++.+.. .|.+|+++++++++.+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~-~G~~V~~~~r~~~~~~~~ 45 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAA-EGARVVVTDRNEEAAERV 45 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 467999999999999988877766 499999999988766554
No 197
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.03 Score=51.55 Aligned_cols=72 Identities=22% Similarity=0.250 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc-ccHHHHHhcCCcEE--EeCCCC-ccccCCCCccEEEecCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST-RNLEFLKSLGADLA--IDYTKD-NFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~-~~~~~~~~~G~~~v--i~~~~~-~~~~~~~~~D~vid~~G 305 (392)
.|.+++|+||+|++|...++.... .|++|+++.++. ++.+... .+.... .|..+. ...+..+++|++|++.|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~-~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG 88 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRA-KGAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHG 88 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-CCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence 368999999999999998877666 499999888765 2222211 111122 233222 12233457999999976
No 198
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.96 E-value=0.0078 Score=60.53 Aligned_cols=83 Identities=19% Similarity=0.270 Sum_probs=58.9
Q ss_pred hcCCCCCCeEE----EEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEe
Q 016265 227 RTGFSAGKSIL----VLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYD 302 (392)
Q Consensus 227 ~~~~~~g~~Vl----I~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid 302 (392)
..+.++|+.+| |+||+|++|.+++|+++. .|++|+.+...+.+....+..+.+. +++|
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~d 89 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAG-LGYDVVANNDGGLTWAAGWGDRFGA-----------------LVFD 89 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhh-CCCeeeecCccccccccCcCCcccE-----------------EEEE
Confidence 46778999998 999999999999999999 4999988766555332222222221 3444
Q ss_pred cCc------------cHHHHHHhcccCCeEEEEcCCC
Q 016265 303 AIG------------QCDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 303 ~~G------------~~~~~~~~l~~~G~iv~~g~~~ 327 (392)
..+ .+...++.|.++|+|+.++...
T Consensus 90 ~~~~~~~~~l~~~~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 90 ATGITDPADLKALYEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEEcccc
Confidence 443 1356778889999999987654
No 199
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.94 E-value=0.12 Score=46.42 Aligned_cols=99 Identities=22% Similarity=0.201 Sum_probs=64.1
Q ss_pred HHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC--eEEEEeCCcccHHHHH----hcCCcE--EEeCCCCccccCC
Q 016265 223 EGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA--SRVAATSSTRNLEFLK----SLGADL--AIDYTKDNFEDLP 294 (392)
Q Consensus 223 ~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~--~vv~~~~~~~~~~~~~----~~G~~~--vi~~~~~~~~~~~ 294 (392)
..++...+++|++||-+| +|.|..++.+++.. +. +++.++.+++-.+.++ ++|.+. ++..+........
T Consensus 68 ~~~~~l~~~~~~~VLDiG--~GsG~~a~~la~~~-~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~ 144 (215)
T TIGR00080 68 MMTELLELKPGMKVLEIG--TGSGYQAAVLAEIV-GRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPL 144 (215)
T ss_pred HHHHHhCCCCcCEEEEEC--CCccHHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCccc
Confidence 344566789999999997 45588888888873 43 5888888877666654 345432 2221111111123
Q ss_pred CCccEEEecCc---cHHHHHHhcccCCeEEEEc
Q 016265 295 EKFDVVYDAIG---QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 295 ~~~D~vid~~G---~~~~~~~~l~~~G~iv~~g 324 (392)
..||+|+-... -.+.+.+.|++||+++..-
T Consensus 145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred CCCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 47998885432 3477889999999987653
No 200
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.92 E-value=0.034 Score=51.37 Aligned_cols=73 Identities=23% Similarity=0.335 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCc-EEE--eCCCCc-ccc-------CCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGAD-LAI--DYTKDN-FED-------LPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~-~vi--~~~~~~-~~~-------~~~~~D~ 299 (392)
.|.+++|+||+|++|...++.+.. .|++|+++++++++.+.+. +++.. ..+ |..+.. ... ..+.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLA-EGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 478999999999999998887766 4999999998877766554 33321 122 222211 111 1236888
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|++.|
T Consensus 84 li~~ag 89 (263)
T PRK06200 84 FVGNAG 89 (263)
T ss_pred EEECCC
Confidence 888866
No 201
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.90 E-value=0.025 Score=57.57 Aligned_cols=71 Identities=18% Similarity=0.276 Sum_probs=53.2
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G 305 (392)
+.+|++|+|+| .|..|++++.+++. .|++|++.+..+.+.+.++++|+..+ .... . .+....+|+||.+.|
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~-~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~-~-~~~l~~~D~VV~SpG 79 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTR-FGARPTVCDDDPDALRPHAERGVATV-STSD-A-VQQIADYALVVTSPG 79 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc-h-HhHhhcCCEEEECCC
Confidence 55789999998 99999999999998 59999998876666666777887443 2211 1 122246799999988
No 202
>PRK06484 short chain dehydrogenase; Validated
Probab=95.90 E-value=0.069 Score=54.69 Aligned_cols=74 Identities=19% Similarity=0.305 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCcE---EEeCCCCc-ccc-------CCCCcc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGADL---AIDYTKDN-FED-------LPEKFD 298 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~~---vi~~~~~~-~~~-------~~~~~D 298 (392)
..|.++||+||++++|...++.... .|++|+++.++.++++.+. +++... ..|..+.. ..+ ..+.+|
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAA-AGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3578999999999999997776666 4999999998877776654 345332 22333221 111 124689
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
++|.+.|
T Consensus 346 ~li~nAg 352 (520)
T PRK06484 346 VLVNNAG 352 (520)
T ss_pred EEEECCC
Confidence 9999876
No 203
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.069 Score=49.64 Aligned_cols=70 Identities=20% Similarity=0.301 Sum_probs=46.3
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE----EEeCCCCc-cc-------cCCCCcc
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL----AIDYTKDN-FE-------DLPEKFD 298 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~----vi~~~~~~-~~-------~~~~~~D 298 (392)
+++|+||+|++|...++.+.. .|++++++.+++++++.+ +..+... ..|..+.. .. +...++|
T Consensus 2 ~vlItGas~giG~~la~~la~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAA-QGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 689999999999998887766 499988888776654433 3334321 23433321 11 1134689
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
++|.+.|
T Consensus 81 ~lv~~ag 87 (272)
T PRK07832 81 VVMNIAG 87 (272)
T ss_pred EEEECCC
Confidence 9999887
No 204
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.12 Score=47.19 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST 268 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~ 268 (392)
.|.+++|+||+|++|...+..+.. .|.+|+++.++.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~-~G~~V~~~~r~~ 40 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAG-AGAHVVVNYRQK 40 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHH-CCCEEEEEeCCc
Confidence 467999999999999998887766 499988887754
No 205
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.038 Score=49.81 Aligned_cols=71 Identities=18% Similarity=0.302 Sum_probs=47.1
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEE--eCCCCc-ccc----C-CCCccEEEecCc
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAI--DYTKDN-FED----L-PEKFDVVYDAIG 305 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi--~~~~~~-~~~----~-~~~~D~vid~~G 305 (392)
.+|+|+|++|++|...+..... .|++|+++++++++.+.+++++...++ |..+.. +.+ . .+++|++|.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLE-RGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHh-CCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 4799999999999997776666 499999999887777666555422222 322211 111 1 236899998765
No 206
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.037 Score=52.27 Aligned_cols=73 Identities=25% Similarity=0.374 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE-EE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL-AI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~-vi--~~~~~~-~~~-------~~~~ 296 (392)
.+.+++|+||+|++|...++.+.. .|++|++++++.++++.+. +.|.+. .+ |..+.. +.+ ..++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~-~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFAR-RGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999998887766 5999999998877665442 233322 22 322211 111 1247
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 118 id~li~~AG 126 (293)
T PRK05866 118 VDILINNAG 126 (293)
T ss_pred CCEEEECCC
Confidence 899999976
No 207
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.036 Score=51.15 Aligned_cols=75 Identities=29% Similarity=0.409 Sum_probs=49.7
Q ss_pred CCCCCeEEEEcCCC-cHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----h-cCCcEE--E--eCCCCc-ccc------
Q 016265 230 FSAGKSILVLNGSG-GVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----S-LGADLA--I--DYTKDN-FED------ 292 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G-~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~-~G~~~v--i--~~~~~~-~~~------ 292 (392)
+..+++++|+||+| ++|.+.++.+.. .|++|+++++++++++... + +|...+ + |..+.+ +.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~-~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALE-EGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 34578999999886 899999888877 5999888888776655432 2 453322 2 333221 111
Q ss_pred -CCCCccEEEecCc
Q 016265 293 -LPEKFDVVYDAIG 305 (392)
Q Consensus 293 -~~~~~D~vid~~G 305 (392)
..+++|++|.+.|
T Consensus 93 ~~~g~id~li~~ag 106 (262)
T PRK07831 93 ERLGRLDVLVNNAG 106 (262)
T ss_pred HHcCCCCEEEECCC
Confidence 1246899999987
No 208
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.85 E-value=0.026 Score=53.23 Aligned_cols=140 Identities=23% Similarity=0.273 Sum_probs=77.4
Q ss_pred CCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHHHHHHHhcCCCCCCeEEEEcCCC
Q 016265 164 FKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSG 243 (392)
Q Consensus 164 ~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlI~Ga~G 243 (392)
+++|++.+..+ .|.+|-.-+...++.+.+++.|-..-=-...+ +...|++. .++|++||=.| +
T Consensus 108 ~~vg~~~~I~P------------~w~~~~~~~~~~~I~idPg~AFGTG~H~TT~l--cl~~l~~~-~~~g~~vLDvG-~- 170 (295)
T PF06325_consen 108 IRVGDRLVIVP------------SWEEYPEPPDEIVIEIDPGMAFGTGHHPTTRL--CLELLEKY-VKPGKRVLDVG-C- 170 (295)
T ss_dssp EEECTTEEEEE------------TT----SSTTSEEEEESTTSSS-SSHCHHHHH--HHHHHHHH-SSTTSEEEEES---
T ss_pred EEECCcEEEEC------------CCcccCCCCCcEEEEECCCCcccCCCCHHHHH--HHHHHHHh-ccCCCEEEEeC-C-
Confidence 56788666643 35566333456677787777654332111111 22333333 67889999887 4
Q ss_pred cHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHh----cCCc-EEEeCCCCccccCCCCccEEEecCc--c----HHHHH
Q 016265 244 GVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKS----LGAD-LAIDYTKDNFEDLPEKFDVVYDAIG--Q----CDRAV 311 (392)
Q Consensus 244 ~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~----~G~~-~vi~~~~~~~~~~~~~~D~vid~~G--~----~~~~~ 311 (392)
|.|.+++..+|. |+ +|++++..+.-.+.+++ .|.. .+.-....+. ..+.||+|+-..- . .....
T Consensus 171 GSGILaiaA~kl--GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~--~~~~~dlvvANI~~~vL~~l~~~~~ 246 (295)
T PF06325_consen 171 GSGILAIAAAKL--GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDL--VEGKFDLVVANILADVLLELAPDIA 246 (295)
T ss_dssp TTSHHHHHHHHT--TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCT--CCS-EEEEEEES-HHHHHHHHHHCH
T ss_pred cHHHHHHHHHHc--CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEeccc--ccccCCEEEECCCHHHHHHHHHHHH
Confidence 458888888874 77 56677776665554433 3422 2211111111 1368999997653 1 35677
Q ss_pred HhcccCCeEEEEc
Q 016265 312 KAIKEGGTVVALT 324 (392)
Q Consensus 312 ~~l~~~G~iv~~g 324 (392)
++++++|.++.-|
T Consensus 247 ~~l~~~G~lIlSG 259 (295)
T PF06325_consen 247 SLLKPGGYLILSG 259 (295)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhhCCCCEEEEcc
Confidence 7899999998665
No 209
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.83 E-value=0.041 Score=46.49 Aligned_cols=100 Identities=22% Similarity=0.308 Sum_probs=60.6
Q ss_pred HHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHH-HHhcCCcEEEeCCCCccccCCCCccE
Q 016265 223 EGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEF-LKSLGADLAIDYTKDNFEDLPEKFDV 299 (392)
Q Consensus 223 ~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~-~~~~G~~~vi~~~~~~~~~~~~~~D~ 299 (392)
.++++... ..+.+|+|+| +|.+|...++.... .| .++++.+++.++.+. +++++... +.....+..+..+++|+
T Consensus 8 ~a~~~~~~~~~~~~i~iiG-~G~~g~~~a~~l~~-~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv 84 (155)
T cd01065 8 RALEEAGIELKGKKVLILG-AGGAARAVAYALAE-LGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEELLAEADL 84 (155)
T ss_pred HHHHhhCCCCCCCEEEEEC-CcHHHHHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhccccCCE
Confidence 34444443 4578899998 69999998887776 45 567777887776654 44555421 11111123333568999
Q ss_pred EEecCcc-H------HHHHHhcccCCeEEEEcC
Q 016265 300 VYDAIGQ-C------DRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 300 vid~~G~-~------~~~~~~l~~~G~iv~~g~ 325 (392)
|+.|++. . ......++++..++.++.
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9999862 1 111234566666666643
No 210
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]
Probab=95.83 E-value=0.026 Score=51.53 Aligned_cols=87 Identities=25% Similarity=0.356 Sum_probs=63.0
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc---------CCcEEEeCCCCccccCCCCccEEEec
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL---------GADLAIDYTKDNFEDLPEKFDVVYDA 303 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~---------G~~~vi~~~~~~~~~~~~~~D~vid~ 303 (392)
|.+||=.| +|+ |++..-|||. |+.|..++.+++-.+.+++- +..+.+.+...+.+...+.||.|+..
T Consensus 90 g~~ilDvG-CGg-GLLSepLArl--ga~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~~~~fDaVvcs 165 (282)
T KOG1270|consen 90 GMKILDVG-CGG-GLLSEPLARL--GAQVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGLTGKFDAVVCS 165 (282)
T ss_pred CceEEEec-cCc-cccchhhHhh--CCeeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhcccccceeeeH
Confidence 47777776 555 9999999984 99999999998877766432 23344566666666666679998743
Q ss_pred -----C----ccHHHHHHhcccCCeEEEE
Q 016265 304 -----I----GQCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 304 -----~----G~~~~~~~~l~~~G~iv~~ 323 (392)
+ .-++.+++.++|+|+++.-
T Consensus 166 evleHV~dp~~~l~~l~~~lkP~G~lfit 194 (282)
T KOG1270|consen 166 EVLEHVKDPQEFLNCLSALLKPNGRLFIT 194 (282)
T ss_pred HHHHHHhCHHHHHHHHHHHhCCCCceEee
Confidence 1 1247888999999998754
No 211
>PRK06128 oxidoreductase; Provisional
Probab=95.83 E-value=0.1 Score=49.32 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=28.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.|.++||+||+|++|...+..... .|++|+++..+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~-~G~~V~i~~~~ 88 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAR-EGADIALNYLP 88 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHH-cCCEEEEEeCC
Confidence 478999999999999998877766 49998877653
No 212
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.034 Score=51.44 Aligned_cols=73 Identities=16% Similarity=0.278 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCc-EE--EeCCCCc-cc----c---CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGAD-LA--IDYTKDN-FE----D---LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~-~v--i~~~~~~-~~----~---~~~~ 296 (392)
++.++||+||+|++|...++.+.. .|++|+++++++++.+.+. ..+.. ++ .|..+.. .. + ..++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAE-AGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999998887776 5999999998877655432 22322 22 2333322 11 1 1247
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|++.|
T Consensus 88 id~vi~~Ag 96 (263)
T PRK07814 88 LDIVVNNVG 96 (263)
T ss_pred CCEEEECCC
Confidence 899999876
No 213
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.80 E-value=0.073 Score=53.51 Aligned_cols=73 Identities=25% Similarity=0.354 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc--ccHH-HHHhcCCcE-EEeCCCCc-ccc-------CCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST--RNLE-FLKSLGADL-AIDYTKDN-FED-------LPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~--~~~~-~~~~~G~~~-vi~~~~~~-~~~-------~~~~~D~ 299 (392)
+|.+++|+||+|++|...++.+.. .|++++++++.. ++++ ...+++... .+|..+.. ..+ ...++|+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~-~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLAR-DGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-CCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 578999999999999998887776 599998887643 2222 234455432 23443322 111 1236899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|++.|
T Consensus 288 vi~~AG 293 (450)
T PRK08261 288 VVHNAG 293 (450)
T ss_pred EEECCC
Confidence 999987
No 214
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.79 E-value=0.025 Score=59.62 Aligned_cols=73 Identities=18% Similarity=0.357 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc---------------------cHHHHHhcCCcEEEeCCC---
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR---------------------NLEFLKSLGADLAIDYTK--- 287 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~---------------------~~~~~~~~G~~~vi~~~~--- 287 (392)
.|++|+|+| +|+.|+.+++.++. .|.+|++....+. +.++++++|.+..++..-
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~-~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 386 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILAR-AGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD 386 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHH-cCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc
Confidence 489999998 99999999999888 5999888876542 456678889877666432
Q ss_pred CccccCCCCccEEEecCcc
Q 016265 288 DNFEDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 288 ~~~~~~~~~~D~vid~~G~ 306 (392)
..+.++..++|.||.++|.
T Consensus 387 ~~~~~l~~~~DaV~latGa 405 (639)
T PRK12809 387 ITFSDLTSEYDAVFIGVGT 405 (639)
T ss_pred CCHHHHHhcCCEEEEeCCC
Confidence 1233445679999999984
No 215
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.043 Score=50.96 Aligned_cols=72 Identities=22% Similarity=0.271 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcEEE--eCCCCc-c-------ccCCCCccEEE
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADLAI--DYTKDN-F-------EDLPEKFDVVY 301 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~vi--~~~~~~-~-------~~~~~~~D~vi 301 (392)
|.+++|+||+|++|...++.+.. .|++++++++++++++.+ ++++...++ |..+.+ + .+...++|++|
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAA-LGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 67999999999999998876666 499999988888776554 344422222 333321 1 11124789999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
.+.|
T Consensus 84 ~~ag 87 (273)
T PRK07825 84 NNAG 87 (273)
T ss_pred ECCC
Confidence 9876
No 216
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.1 Score=47.53 Aligned_cols=73 Identities=22% Similarity=0.281 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~~-~~~-------~~~~ 296 (392)
.+.+++|+||+|++|...+..... .|++++++.+++++.+.+ ++.+... ++ |..+.. ..+ ..++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAE-AGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999998887766 499998888777655433 2234321 22 332221 111 1247
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 85 id~vi~~ag 93 (250)
T PRK12939 85 LDGLVNNAG 93 (250)
T ss_pred CCEEEECCC
Confidence 899999977
No 217
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=95.72 E-value=0.17 Score=42.77 Aligned_cols=107 Identities=20% Similarity=0.280 Sum_probs=62.8
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC--CcccHHHHHh----cC---CcE-------EEeCCC------Ccccc
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATS--STRNLEFLKS----LG---ADL-------AIDYTK------DNFED 292 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~--~~~~~~~~~~----~G---~~~-------vi~~~~------~~~~~ 292 (392)
+|.|+| .|.+|...++.+....+.+++++.. +.+.+.++-+ .| .+. +++... .+..+
T Consensus 2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 588998 7999999888876534666666543 3334444432 22 111 111110 01111
Q ss_pred C---CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHH
Q 016265 293 L---PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEV 342 (392)
Q Consensus 293 ~---~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~ 342 (392)
+ ..++|+|+||+|. .+.+...+..|-+-|.++.+.......+++..+.+.
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~~~~~t~V~GvN~~~ 136 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAKDADKTFVYGVNHDE 136 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCCCCCceEEEeechHH
Confidence 1 1278999999994 356667888888888888876544335665544443
No 218
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.68 E-value=0.034 Score=52.18 Aligned_cols=91 Identities=22% Similarity=0.304 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHHHH-hcCCcEEEeCCCCccccCCCCccEEEecCcc-H
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEFLK-SLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ-C 307 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~~~-~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~-~ 307 (392)
..+.+|+|+| +|++|.+++..++. .| .+++++.++.++.+.+. +++....+.. ..+..+....+|+||+|+.. +
T Consensus 121 ~~~k~vlVlG-aGg~a~ai~~aL~~-~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~ 197 (278)
T PRK00258 121 LKGKRILILG-AGGAARAVILPLLD-LGVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM 197 (278)
T ss_pred CCCCEEEEEc-CcHHHHHHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence 4567899998 79999999988887 48 67888888888766553 4432110111 11122334578999999751 1
Q ss_pred -------HHHHHhcccCCeEEEEc
Q 016265 308 -------DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 308 -------~~~~~~l~~~G~iv~~g 324 (392)
......+.++..++++.
T Consensus 198 ~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 198 SGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred CCCCCCCCCCHHHcCCCCEEEEee
Confidence 12235667776666653
No 219
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.68 E-value=0.12 Score=47.39 Aligned_cols=73 Identities=18% Similarity=0.286 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcEE-E--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADLA-I--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~v-i--~~~~~~-~~~-------~~~~ 296 (392)
.|.++||+||+|++|...++.+.. .|++++++.+++++.+.+ ++.|.... + |..+.. +.+ ...+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELAR-AGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999988887766 599999888877654433 33454322 2 222211 111 1235
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 85 ~d~vi~~ag 93 (262)
T PRK13394 85 VDILVSNAG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999876
No 220
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.67 E-value=0.13 Score=45.13 Aligned_cols=114 Identities=23% Similarity=0.256 Sum_probs=71.3
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCcE--EEeCCCCccccCCCCccE
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGADL--AIDYTKDNFEDLPEKFDV 299 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~~--vi~~~~~~~~~~~~~~D~ 299 (392)
....+.++++||=+| +| .|..++.+++...+.+++.++.+++.++.+++ ++... ++..+. .....+.+|+
T Consensus 25 ~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~--~~~~~~~~D~ 100 (187)
T PRK08287 25 SKLELHRAKHLIDVG-AG-TGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA--PIELPGKADA 100 (187)
T ss_pred HhcCCCCCCEEEEEC-Cc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc--hhhcCcCCCE
Confidence 455677889998887 44 48888888876324688899998887766643 44322 222111 1123457999
Q ss_pred EEecC--cc----HHHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCcc
Q 016265 300 VYDAI--GQ----CDRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 300 vid~~--G~----~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
|+... +. ++.+.+.|++||+++... .......++.+++++..+.
T Consensus 101 v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~-------------~~~~~~~~~~~~l~~~g~~ 150 (187)
T PRK08287 101 IFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF-------------ILLENLHSALAHLEKCGVS 150 (187)
T ss_pred EEECCCccCHHHHHHHHHHhcCCCeEEEEEE-------------ecHhhHHHHHHHHHHCCCC
Confidence 98643 22 467888999999986531 1233445666677664443
No 221
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.67 E-value=0.014 Score=50.39 Aligned_cols=90 Identities=29% Similarity=0.443 Sum_probs=63.5
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEe-CCCC--------------------cccc
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAID-YTKD--------------------NFED 292 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~-~~~~--------------------~~~~ 292 (392)
-+|+|+| +|.+|+.|+.+++.+ |+++++.+...++++..+..++..+.. +.+. .+.+
T Consensus 21 ~~vvv~G-~G~vg~gA~~~~~~l-Ga~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 21 AKVVVTG-AGRVGQGAAEIAKGL-GAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp -EEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred eEEEEEC-CCHHHHHHHHHHhHC-CCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 6789998 999999999999995 999999999988888888877654433 1110 0111
Q ss_pred CCCCccEEEecC---cc------HHHHHHhcccCCeEEEEcC
Q 016265 293 LPEKFDVVYDAI---GQ------CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 293 ~~~~~D~vid~~---G~------~~~~~~~l~~~G~iv~~g~ 325 (392)
....+|++|.+. +. .+..++.|+++..|++++.
T Consensus 99 ~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 99 FIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 123579998652 21 3788999999888888854
No 222
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.66 E-value=0.038 Score=51.06 Aligned_cols=44 Identities=25% Similarity=0.388 Sum_probs=36.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS 276 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~ 276 (392)
.+.+++|+||+|++|...++.+.. .|++|+++.++.++++.+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~l~~ 47 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVA-EGARVAVLDKSAAGLQELEA 47 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHh
Confidence 478999999999999998877666 49999999888777666554
No 223
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.65 E-value=0.064 Score=51.08 Aligned_cols=87 Identities=16% Similarity=0.224 Sum_probs=59.5
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCC--eEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGA--SRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~--~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.+|+|+| +|.+|.+.+..++. .|. ++++.++++++.+.+++.|....+. .+..+..+.+|+||.|+..
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~-~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRR-LGLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHh-cCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHhcCCCEEEECCCHHHHHH
Confidence 5799998 99999988887776 474 7888888888888888887532211 1122334578999999872
Q ss_pred -HHHHHHhcccCCeEEEEcC
Q 016265 307 -CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 307 -~~~~~~~l~~~G~iv~~g~ 325 (392)
++.....++++..++.++.
T Consensus 82 v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHhhCCCCCEEEeCcc
Confidence 2334445667766666543
No 224
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.63 E-value=0.13 Score=47.28 Aligned_cols=95 Identities=16% Similarity=0.139 Sum_probs=62.9
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCC-cEEEeCCCCccccCCCCccEEEecC
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGA-DLAIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~-~~vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
+.....++++||-+| +|. |..+..+++ .|.+++.++.+++.++.+++... ...+..+-+.+.-..+.||+|+...
T Consensus 36 ~~l~~~~~~~vLDiG-cG~-G~~~~~l~~--~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~ 111 (251)
T PRK10258 36 AMLPQRKFTHVLDAG-CGP-GWMSRYWRE--RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNL 111 (251)
T ss_pred HhcCccCCCeEEEee-CCC-CHHHHHHHH--cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECc
Confidence 334445678899998 665 777777775 37899999999998888876542 2222222122111234699998654
Q ss_pred c---------cHHHHHHhcccCCeEEEEc
Q 016265 305 G---------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 305 G---------~~~~~~~~l~~~G~iv~~g 324 (392)
. .+..+.+.|++||.++...
T Consensus 112 ~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 112 AVQWCGNLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred hhhhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 3 2577888999999998653
No 225
>PLN02244 tocopherol O-methyltransferase
Probab=95.62 E-value=0.14 Score=49.60 Aligned_cols=92 Identities=20% Similarity=0.186 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCcE---EEeCCCCccccCCCCccEEEec
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGADL---AIDYTKDNFEDLPEKFDVVYDA 303 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~~---vi~~~~~~~~~~~~~~D~vid~ 303 (392)
+++++||=+| + |.|..+..+++. +|++++.++.++...+.+++ .|... ++..+..+.....+.||+|+..
T Consensus 117 ~~~~~VLDiG-C-G~G~~~~~La~~-~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~ 193 (340)
T PLN02244 117 KRPKRIVDVG-C-GIGGSSRYLARK-YGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSM 193 (340)
T ss_pred CCCCeEEEec-C-CCCHHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEEC
Confidence 7889999887 4 557788889987 59999999998887666543 34321 1111111111123469999864
Q ss_pred Cc---------cHHHHHHhcccCCeEEEEcC
Q 016265 304 IG---------QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 304 ~G---------~~~~~~~~l~~~G~iv~~g~ 325 (392)
-. .+..+.++|+|||+++....
T Consensus 194 ~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 194 ESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred CchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 22 14688899999999987643
No 226
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.62 E-value=0.15 Score=48.01 Aligned_cols=141 Identities=23% Similarity=0.260 Sum_probs=81.6
Q ss_pred CCCCCCEEEecccccccCCCCCCCcceeEEEecCCceeeCCCCCCHHhHhccchhHHHH--HHHHHhcCCCCCCeEEEEc
Q 016265 163 EFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETA--YEGLERTGFSAGKSILVLN 240 (392)
Q Consensus 163 ~~~vGdrV~~~~~~~~~~~~~~~G~~a~~~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta--~~al~~~~~~~g~~VlI~G 240 (392)
-+++|+|.+..+ +|.+|..-....++++.+++.|-.. ....|. ..+|++ ..++|++|+=+|
T Consensus 108 P~rig~~f~I~P------------sw~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~lcL~~Le~-~~~~g~~vlDvG 170 (300)
T COG2264 108 PVRIGERFVIVP------------SWREYPEPSDELNIELDPGLAFGTG----THPTTSLCLEALEK-LLKKGKTVLDVG 170 (300)
T ss_pred cEEeeeeEEECC------------CCccCCCCCCceEEEEccccccCCC----CChhHHHHHHHHHH-hhcCCCEEEEec
Confidence 367788877654 3555433324566777777755321 122122 223332 356899999987
Q ss_pred CCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHHHH----hcCCcEEEeCCCCccc--cCCCCccEEEecC--cc----H
Q 016265 241 GSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEFLK----SLGADLAIDYTKDNFE--DLPEKFDVVYDAI--GQ----C 307 (392)
Q Consensus 241 a~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~~~----~~G~~~vi~~~~~~~~--~~~~~~D~vid~~--G~----~ 307 (392)
.|.|.+++..+|. |+. ++.++..+-..+.++ ..|....+........ ...+.+|+|+-.. .. .
T Consensus 171 --cGSGILaIAa~kL--GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La 246 (300)
T COG2264 171 --CGSGILAIAAAKL--GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELA 246 (300)
T ss_pred --CChhHHHHHHHHc--CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHH
Confidence 4569999988884 775 666666555444443 3444421100001111 1235799999774 21 3
Q ss_pred HHHHHhcccCCeEEEEc
Q 016265 308 DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 308 ~~~~~~l~~~G~iv~~g 324 (392)
.....+++|||++++-|
T Consensus 247 ~~~~~~lkpgg~lIlSG 263 (300)
T COG2264 247 PDIKRLLKPGGRLILSG 263 (300)
T ss_pred HHHHHHcCCCceEEEEe
Confidence 68888999999998765
No 227
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.048 Score=49.98 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=33.9
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
|++++|+||+|++|...++.... .|++++++.+++++.+.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~-~G~~Vi~~~r~~~~~~~~ 41 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAE-EGANVVITGRTKEKLEEA 41 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 57899999999999998888777 599998888877665544
No 228
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.56 E-value=0.034 Score=56.31 Aligned_cols=74 Identities=22% Similarity=0.458 Sum_probs=53.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc---------------------ccHHHHHhcCCcEEEeCCCC-
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST---------------------RNLEFLKSLGADLAIDYTKD- 288 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~---------------------~~~~~~~~~G~~~vi~~~~~- 288 (392)
..+++|+|+| +|+.|+.++..++. .|.++++....+ ...+.++++|.+..++..-.
T Consensus 139 ~~~~~V~IIG-~GpaGl~aA~~l~~-~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 216 (467)
T TIGR01318 139 PTGKRVAVIG-AGPAGLACADILAR-AGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR 216 (467)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHH-cCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC
Confidence 3678999998 99999999999988 599988887543 23566788898766554211
Q ss_pred --ccccCCCCccEEEecCcc
Q 016265 289 --NFEDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 289 --~~~~~~~~~D~vid~~G~ 306 (392)
...+...++|.||.++|.
T Consensus 217 ~~~~~~~~~~~D~vilAtGa 236 (467)
T TIGR01318 217 DISLDDLLEDYDAVFLGVGT 236 (467)
T ss_pred ccCHHHHHhcCCEEEEEeCC
Confidence 122223479999999984
No 229
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.56 E-value=0.13 Score=47.44 Aligned_cols=95 Identities=23% Similarity=0.238 Sum_probs=66.4
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecC
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
+......++++||=+| +|. |..+..+++..-+.+++.++.++.-++.+++.+.+.+ ..+-.++. ....||+|+-..
T Consensus 22 l~~l~~~~~~~vLDlG-cG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~~d~~~~~-~~~~fD~v~~~~ 97 (255)
T PRK14103 22 LARVGAERARRVVDLG-CGP-GNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDAR-TGDVRDWK-PKPDTDVVVSNA 97 (255)
T ss_pred HHhCCCCCCCEEEEEc-CCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-EcChhhCC-CCCCceEEEEeh
Confidence 4556678889999997 444 7888888876336789999999888888877665432 22222221 234799998754
Q ss_pred c---------cHHHHHHhcccCCeEEEE
Q 016265 305 G---------QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 305 G---------~~~~~~~~l~~~G~iv~~ 323 (392)
. .+..+.+.|+|||+++..
T Consensus 98 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 98 ALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 3 146788899999998764
No 230
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.55 E-value=0.17 Score=46.12 Aligned_cols=99 Identities=21% Similarity=0.282 Sum_probs=66.9
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHHHH----hcCCcEEEeCCCCcccc--CCCCc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEFLK----SLGADLAIDYTKDNFED--LPEKF 297 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~~~----~~G~~~vi~~~~~~~~~--~~~~~ 297 (392)
+...++.+|++|+=.| -|.|.+++-||+.+.. .+++.....++..+.++ ++|....+.....+..+ ..+.+
T Consensus 87 ~~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~v 164 (256)
T COG2519 87 VARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDV 164 (256)
T ss_pred HHHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecccccccccccc
Confidence 3567899999998876 4558899999987644 47777787777776664 34544323222222222 13378
Q ss_pred cEEEecCc----cHHHHHHhcccCCeEEEEcC
Q 016265 298 DVVYDAIG----QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 298 D~vid~~G----~~~~~~~~l~~~G~iv~~g~ 325 (392)
|.+|-=.. .++.+.+.|++||.++.+..
T Consensus 165 Dav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 165 DAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 88774443 36899999999999998743
No 231
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=95.55 E-value=0.044 Score=53.51 Aligned_cols=91 Identities=27% Similarity=0.293 Sum_probs=61.2
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHHHHhcC---C-cEEEeCCCC-ccccCCCCccEEEecCccH
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEFLKSLG---A-DLAIDYTKD-NFEDLPEKFDVVYDAIGQC 307 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~~~~~G---~-~~vi~~~~~-~~~~~~~~~D~vid~~G~~ 307 (392)
.+|||+| +|.||+.+++.+.+ .+ .+|.+++++.++.+.+...+ . ...+|..+. ...++..++|+||+|.+..
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~-~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQ-NGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHh-CCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 4789998 79999999998655 36 78999999988888886553 1 234444332 2344556779999998732
Q ss_pred --HHHH-HhcccCCeEEEEcCC
Q 016265 308 --DRAV-KAIKEGGTVVALTGA 326 (392)
Q Consensus 308 --~~~~-~~l~~~G~iv~~g~~ 326 (392)
..++ .|++.|=.++..+..
T Consensus 80 ~~~~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 80 VDLTILKACIKTGVDYVDTSYY 101 (389)
T ss_pred hhHHHHHHHHHhCCCEEEcccC
Confidence 3444 344555556655443
No 232
>PRK06196 oxidoreductase; Provisional
Probab=95.55 E-value=0.054 Score=51.63 Aligned_cols=73 Identities=16% Similarity=0.239 Sum_probs=47.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCcEEE--eCCCCc-ccc-------CCCCccEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGADLAI--DYTKDN-FED-------LPEKFDVV 300 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~~vi--~~~~~~-~~~-------~~~~~D~v 300 (392)
.|.+|+|+||+|++|...+..... .|++|+++.++.++.+.+. ++..-..+ |..+.. +.+ ...++|++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~-~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQ-AGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 468999999999999988776666 4999999988877655432 33211222 332211 111 12468999
Q ss_pred EecCc
Q 016265 301 YDAIG 305 (392)
Q Consensus 301 id~~G 305 (392)
|.+.|
T Consensus 104 i~nAg 108 (315)
T PRK06196 104 INNAG 108 (315)
T ss_pred EECCC
Confidence 99876
No 233
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.53 E-value=0.058 Score=50.30 Aligned_cols=73 Identities=23% Similarity=0.229 Sum_probs=45.3
Q ss_pred CCCeEEEEcCCC--cHHHHHHHHHHHhcCCeEEEEeCCcccH---HHH-HhcCCcEEE--eCCCCc-ccc-------CCC
Q 016265 232 AGKSILVLNGSG--GVGSLVIQLAKQVFGASRVAATSSTRNL---EFL-KSLGADLAI--DYTKDN-FED-------LPE 295 (392)
Q Consensus 232 ~g~~VlI~Ga~G--~vG~~aiqlak~~~G~~vv~~~~~~~~~---~~~-~~~G~~~vi--~~~~~~-~~~-------~~~ 295 (392)
.|+++||+||++ ++|.+.++.+.. .|++|+++.++++.. +.+ +++|....+ |..+.. ... .-+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~-~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAA-QGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHh-CCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 478999999886 999997776655 499998887654322 222 344543333 322211 111 124
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
.+|++|++.|
T Consensus 85 ~iD~lVnnAG 94 (271)
T PRK06505 85 KLDFVVHAIG 94 (271)
T ss_pred CCCEEEECCc
Confidence 6899998876
No 234
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.056 Score=49.73 Aligned_cols=76 Identities=22% Similarity=0.250 Sum_probs=50.6
Q ss_pred CCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cCCc--EE--EeCCCCc-cc----c---CCC
Q 016265 229 GFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LGAD--LA--IDYTKDN-FE----D---LPE 295 (392)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~--~v--i~~~~~~-~~----~---~~~ 295 (392)
..-++.++||+||+|++|...+..+.. .|.+|+++.++.++.+.+.+ .... .+ .|..+.. .. + ...
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAE-AGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 345778999999999999998888777 59999888887766655443 2211 12 2333221 11 1 124
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
++|+||.+.|
T Consensus 86 ~~d~vi~~ag 95 (264)
T PRK12829 86 GLDVLVNNAG 95 (264)
T ss_pred CCCEEEECCC
Confidence 7899998876
No 235
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.53 E-value=0.041 Score=51.48 Aligned_cols=73 Identities=26% Similarity=0.423 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCCCcHHHH-HHHHHHHhcCCeEEEEeCCcccHHHH-----HhcCC---cEEEeCCCCc--cccC---C--
Q 016265 231 SAGKSILVLNGSGGVGSL-VIQLAKQVFGASRVAATSSTRNLEFL-----KSLGA---DLAIDYTKDN--FEDL---P-- 294 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~-aiqlak~~~G~~vv~~~~~~~~~~~~-----~~~G~---~~vi~~~~~~--~~~~---~-- 294 (392)
+.|++.+|.||+.++|.+ |-++|| .|.+++.+.++++|++.. ++.++ .+++|+.+++ ++.+ .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk--rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK--RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence 457999999999999977 778887 399999999999998765 33442 2467887766 3332 1
Q ss_pred CCccEEEecCc
Q 016265 295 EKFDVVYDAIG 305 (392)
Q Consensus 295 ~~~D~vid~~G 305 (392)
-.+-+.++++|
T Consensus 125 ~~VgILVNNvG 135 (312)
T KOG1014|consen 125 LDVGILVNNVG 135 (312)
T ss_pred CceEEEEeccc
Confidence 24567788887
No 236
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.51 E-value=0.17 Score=47.02 Aligned_cols=97 Identities=22% Similarity=0.236 Sum_probs=63.0
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC--CeEEEEeCCcccHHHHHhcC-------Cc--EEEeCCCCccccCC
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFG--ASRVAATSSTRNLEFLKSLG-------AD--LAIDYTKDNFEDLP 294 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G--~~vv~~~~~~~~~~~~~~~G-------~~--~vi~~~~~~~~~~~ 294 (392)
+...++++++||-+| +| .|..+..+++.. + .+++.++.+++-++.+++.. .+ ..+..+...+.-..
T Consensus 67 ~~~~~~~~~~VLDlG-cG-tG~~~~~la~~~-~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~ 143 (261)
T PLN02233 67 SWSGAKMGDRVLDLC-CG-SGDLAFLLSEKV-GSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDD 143 (261)
T ss_pred HHhCCCCCCEEEEEC-Cc-CCHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCC
Confidence 345678899999997 43 366778888763 4 58899999988877775321 11 11222212221113
Q ss_pred CCccEEEecCc---------cHHHHHHhcccCCeEEEEcC
Q 016265 295 EKFDVVYDAIG---------QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 295 ~~~D~vid~~G---------~~~~~~~~l~~~G~iv~~g~ 325 (392)
+.||+|+-..+ .+.++.+.|+|||+++....
T Consensus 144 ~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~ 183 (261)
T PLN02233 144 CYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF 183 (261)
T ss_pred CCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence 46999986543 15789999999999987744
No 237
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.056 Score=49.62 Aligned_cols=73 Identities=23% Similarity=0.274 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE-E--EeCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL-A--IDYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~-v--i~~~~~~-~~~-------~~~~ 296 (392)
.|.++||+||+|++|...++.+.. .|++|+++.++.++++.+. ..|... . .|..+.. +.+ .-++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVE-AGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999998887766 5999999888777655442 223221 2 2332211 111 1247
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 87 id~lv~~ag 95 (253)
T PRK05867 87 IDIAVCNAG 95 (253)
T ss_pred CCEEEECCC
Confidence 899998876
No 238
>PRK06398 aldose dehydrogenase; Validated
Probab=95.45 E-value=0.11 Score=47.93 Aligned_cols=38 Identities=24% Similarity=0.348 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN 270 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~ 270 (392)
.|.++||+||+|++|...+..+.. .|++|+++.+++.+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~-~G~~Vi~~~r~~~~ 42 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKE-EGSNVINFDIKEPS 42 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCeEEEEeCCccc
Confidence 478999999999999998887766 59999988876543
No 239
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.45 E-value=0.076 Score=48.39 Aligned_cols=73 Identities=22% Similarity=0.322 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE---EEeCCCC-cccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL---AIDYTKD-NFED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~---vi~~~~~-~~~~-------~~~~ 296 (392)
.|++++|+|++|++|+..++.+.. .|++++++++++.+++.+ +..+... ..|..+. ...+ ...+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~-~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQ-KGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999988877 599998888877665443 2334432 2232221 1111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (253)
T PRK08217 83 LNGLINNAG 91 (253)
T ss_pred CCEEEECCC
Confidence 899998876
No 240
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.062 Score=49.27 Aligned_cols=72 Identities=22% Similarity=0.312 Sum_probs=48.3
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE-E--EeCCCC-cccc-CCCCccEEEec
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL-A--IDYTKD-NFED-LPEKFDVVYDA 303 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~-v--i~~~~~-~~~~-~~~~~D~vid~ 303 (392)
+.++||+||+|++|...++.+.. .|++++++++++.+.+.++ ..+... + .|..+. .+.. ...++|++|.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLAR-KGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 46899999999999999888877 5999999888776654443 233221 1 233222 1211 23479999998
Q ss_pred Cc
Q 016265 304 IG 305 (392)
Q Consensus 304 ~G 305 (392)
.|
T Consensus 81 ag 82 (257)
T PRK09291 81 AG 82 (257)
T ss_pred CC
Confidence 76
No 241
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.41 E-value=0.079 Score=51.12 Aligned_cols=104 Identities=24% Similarity=0.258 Sum_probs=71.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...++.++. +|.+|++.+++.... .....|... .++.+.....|+|+-++..
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~-~G~~V~~~d~~~~~~-~~~~~~~~~------~~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKG-FGMRILYYSRTRKPE-AEKELGAEY------RPLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHH-CCCEEEEECCCCChh-hHHHcCCEe------cCHHHHHhhCCEEEEeCCCChHHh
Confidence 578999998 99999999999998 699998888765432 333444321 1344455678999988751
Q ss_pred --H-HHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCcc
Q 016265 307 --C-DRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
+ ...++.|+++..++.++... --+-+.+.+.+++|++.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg~------------~vd~~aL~~aL~~g~i~ 260 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARGK------------VVDTKALVKALKEGWIA 260 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCch------------hcCHHHHHHHHHcCCeE
Confidence 1 57788899998888775322 11224556666776654
No 242
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.074 Score=50.77 Aligned_cols=41 Identities=22% Similarity=0.235 Sum_probs=33.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEF 273 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~ 273 (392)
.|.+++|+||++++|...+..+.. .|++|+++.++.++.+.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~-~G~~Vil~~R~~~~~~~ 53 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAA-AGAEVILPVRNRAKGEA 53 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHH
Confidence 478999999999999998776655 49999999988776544
No 243
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.067 Score=49.41 Aligned_cols=42 Identities=26% Similarity=0.380 Sum_probs=35.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.|++++|+||++++|...++.... .|++|+++.+++++++.+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~ 48 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLE-AGASVAICGRDEERLASA 48 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHH
Confidence 478999999999999998887766 599999999887766543
No 244
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.16 Score=46.12 Aligned_cols=43 Identities=16% Similarity=0.243 Sum_probs=34.0
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL 277 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~ 277 (392)
.+++|+||+|++|...+..... .|++|+++++++++++.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAK-QGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHHh
Confidence 4799999999999876665555 499999999988877766543
No 245
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.075 Score=49.59 Aligned_cols=73 Identities=25% Similarity=0.228 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcC-Cc-EEE--eCCCCc-ccc-------CCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLG-AD-LAI--DYTKDN-FED-------LPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G-~~-~vi--~~~~~~-~~~-------~~~~~D~ 299 (392)
.+.+++|+||+|++|...++.+.. .|++|+++++++++++.+.+.. .. ..+ |..+.. ..+ ..+++|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~-~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALA-AGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHh-CcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 357899999999999998887766 4999999999887776655432 21 122 332221 111 1236899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 82 vv~~ag 87 (277)
T PRK06180 82 LVNNAG 87 (277)
T ss_pred EEECCC
Confidence 999977
No 246
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.078 Score=48.57 Aligned_cols=73 Identities=22% Similarity=0.301 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcE--E--EeCCCCc-ccc-------CCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADL--A--IDYTKDN-FED-------LPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~--v--i~~~~~~-~~~-------~~~~~D~ 299 (392)
.+.+|||+||+|++|...++.+.. .|++|+++.++++..+...+..... . .|..+.. +.+ ...++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAA-KGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 478999999999999988877766 5999998888766554444432211 2 2322211 111 1236899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 93 vi~~ag 98 (255)
T PRK06841 93 LVNSAG 98 (255)
T ss_pred EEECCC
Confidence 999876
No 247
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.29 E-value=0.078 Score=48.32 Aligned_cols=73 Identities=23% Similarity=0.330 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc--cHHHHHhcCCc-EEE--eCCCCc-cc-------cCCCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR--NLEFLKSLGAD-LAI--DYTKDN-FE-------DLPEKFD 298 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~--~~~~~~~~G~~-~vi--~~~~~~-~~-------~~~~~~D 298 (392)
.|.+++|+||+|++|...+..+.. .|++++++.++.. ..+.+++.+.. .++ |..+.+ +. +...++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~-~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAE-AGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999997777666 4999988887542 12333444432 222 322211 11 1124689
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
++|.+.|
T Consensus 83 ~li~~ag 89 (248)
T TIGR01832 83 ILVNNAG 89 (248)
T ss_pred EEEECCC
Confidence 9998876
No 248
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.28 E-value=0.052 Score=44.06 Aligned_cols=90 Identities=29% Similarity=0.382 Sum_probs=53.9
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc----cHHHHHh--cC-CcEEEeCCCCccccCCCCccEEEecCcc-
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR----NLEFLKS--LG-ADLAIDYTKDNFEDLPEKFDVVYDAIGQ- 306 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~----~~~~~~~--~G-~~~vi~~~~~~~~~~~~~~D~vid~~G~- 306 (392)
+|.|+||+|-+|...+++....-..+++.+..+.. ++..... .+ .+..+.. .+..+. .++|+||.|++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~Dvvf~a~~~~ 77 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEEL-SDVDVVFLALPHG 77 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHH-TTESEEEE-SCHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHh-hcCCEEEecCchh
Confidence 58999999999999998887754566665554333 2332211 11 1222221 222223 689999999983
Q ss_pred --HHHHHHhcccCCeEEEEcCCC
Q 016265 307 --CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 307 --~~~~~~~l~~~G~iv~~g~~~ 327 (392)
.+..-++++.|-+++..+...
T Consensus 78 ~~~~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 78 ASKELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp HHHHHHHHHHHTTSEEEESSSTT
T ss_pred HHHHHHHHHhhCCcEEEeCCHHH
Confidence 244445567777888886644
No 249
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.085 Score=48.37 Aligned_cols=73 Identities=22% Similarity=0.365 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCCc-c----cc---CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKDN-F----ED---LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~~-~----~~---~~~~ 296 (392)
.+.+++|+||+|++|...+..... .|++++++.+++++++.+ ++.|.+. .+ |..+.+ . .+ .-++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAR-EGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 467999999999999998876666 499999998887766544 2334322 22 322211 1 11 1236
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 84 id~li~~ag 92 (254)
T PRK07478 84 LDIAFNNAG 92 (254)
T ss_pred CCEEEECCC
Confidence 899998876
No 250
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.27 E-value=0.092 Score=48.48 Aligned_cols=73 Identities=18% Similarity=0.153 Sum_probs=44.6
Q ss_pred CCCeEEEEcCC--CcHHHHHHHHHHHhcCCeEEEEeCCcccH---HHH-HhcCCcEEEeCCCCcccc----------CCC
Q 016265 232 AGKSILVLNGS--GGVGSLVIQLAKQVFGASRVAATSSTRNL---EFL-KSLGADLAIDYTKDNFED----------LPE 295 (392)
Q Consensus 232 ~g~~VlI~Ga~--G~vG~~aiqlak~~~G~~vv~~~~~~~~~---~~~-~~~G~~~vi~~~~~~~~~----------~~~ 295 (392)
.|++++|+||+ +++|.+.++.... .|++|+++.++++.. +.+ ++++...++..+-.+.++ .-+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRA-LGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-cCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999987 4999998776655 499998888765432 222 334432333222111111 124
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
.+|++|++.|
T Consensus 88 ~ld~lv~nAg 97 (258)
T PRK07533 88 RLDFLLHSIA 97 (258)
T ss_pred CCCEEEEcCc
Confidence 6899998765
No 251
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.26 E-value=0.13 Score=46.34 Aligned_cols=91 Identities=20% Similarity=0.199 Sum_probs=60.5
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcEE--------------EeCCCCcccc--
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADLA--------------IDYTKDNFED-- 292 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~v--------------i~~~~~~~~~-- 292 (392)
..++.+||+.| .|.|.-++.+|. .|.+|+.++.++.-.+.+ ++.|.... ++....++.+
T Consensus 32 ~~~~~rvLd~G--CG~G~da~~LA~--~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 107 (213)
T TIGR03840 32 LPAGARVFVPL--CGKSLDLAWLAE--QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALT 107 (213)
T ss_pred CCCCCeEEEeC--CCchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCC
Confidence 35778999997 456999999996 399999999998877764 33332210 1100111111
Q ss_pred --CCCCccEEEecCc--c---------HHHHHHhcccCCeEEEEc
Q 016265 293 --LPEKFDVVYDAIG--Q---------CDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 293 --~~~~~D~vid~~G--~---------~~~~~~~l~~~G~iv~~g 324 (392)
..+.||.++|+.- . +..+.++|+|||+++.++
T Consensus 108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~ 152 (213)
T TIGR03840 108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLIT 152 (213)
T ss_pred cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 1246899999753 1 468889999999866654
No 252
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.26 E-value=0.24 Score=44.98 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=60.6
Q ss_pred HHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCe---EEEEeCC----ccc--------HHHHHhcCCcEEEeCC
Q 016265 223 EGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGAS---RVAATSS----TRN--------LEFLKSLGADLAIDYT 286 (392)
Q Consensus 223 ~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~---vv~~~~~----~~~--------~~~~~~~G~~~vi~~~ 286 (392)
.+++..+. -.+.+|+|+| +|+.|..++..+.. .|++ +++++++ .+| .++++.++... .+
T Consensus 14 ~al~~~g~~l~~~rvlvlG-AGgAg~aiA~~L~~-~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-- 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVING-AGAAGIAIARLLLA-AGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-- 88 (226)
T ss_pred HHHHHhCCCccCCEEEEEC-chHHHHHHHHHHHH-cCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc--
Confidence 34444432 4567999998 89999998887776 4875 6677776 343 33445543211 11
Q ss_pred CCccccCCCCccEEEecCc--cH-HHHHHhcccCCeEEEEcC
Q 016265 287 KDNFEDLPEKFDVVYDAIG--QC-DRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 287 ~~~~~~~~~~~D~vid~~G--~~-~~~~~~l~~~G~iv~~g~ 325 (392)
.++.+..+++|++|++++ .+ ...++.++++..++.+..
T Consensus 89 -~~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsn 129 (226)
T cd05311 89 -GTLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALAN 129 (226)
T ss_pred -CCHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCC
Confidence 123233346899999985 22 567777777776665553
No 253
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.095 Score=48.27 Aligned_cols=76 Identities=22% Similarity=0.255 Sum_probs=47.2
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc-HHH----HHhcCC-c-EEE--eCCCCc-c----ccC--
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN-LEF----LKSLGA-D-LAI--DYTKDN-F----EDL-- 293 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~-~~~----~~~~G~-~-~vi--~~~~~~-~----~~~-- 293 (392)
+..+.+|+|+||+|++|...++-+....|++|+++++++++ ++. ++..+. + +++ |..+.. . .+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 45678999999999999998875444235899998887765 433 333342 1 223 332221 1 111
Q ss_pred CCCccEEEecCc
Q 016265 294 PEKFDVVYDAIG 305 (392)
Q Consensus 294 ~~~~D~vid~~G 305 (392)
.+++|++|.+.|
T Consensus 85 ~g~id~li~~ag 96 (253)
T PRK07904 85 GGDVDVAIVAFG 96 (253)
T ss_pred cCCCCEEEEeee
Confidence 147999988766
No 254
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=95.24 E-value=0.35 Score=43.75 Aligned_cols=98 Identities=26% Similarity=0.293 Sum_probs=63.3
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC--CeEEEEeCCcccHHHHHhcCC----c---EEEeCCCCccccCCC
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFG--ASRVAATSSTRNLEFLKSLGA----D---LAIDYTKDNFEDLPE 295 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G--~~vv~~~~~~~~~~~~~~~G~----~---~vi~~~~~~~~~~~~ 295 (392)
+......++.+|+-+| +|. |..+..+++. .+ .+++.++.++...+.+++.-. . .++..+..+.....+
T Consensus 44 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~-~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 120 (239)
T PRK00216 44 IKWLGVRPGDKVLDLA-CGT-GDLAIALAKA-VGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDN 120 (239)
T ss_pred HHHhCCCCCCeEEEeC-CCC-CHHHHHHHHH-cCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCC
Confidence 3444566788999997 666 8888889887 44 788888988887777765321 1 111111111111234
Q ss_pred CccEEEecCc---------cHHHHHHhcccCCeEEEEcC
Q 016265 296 KFDVVYDAIG---------QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 296 ~~D~vid~~G---------~~~~~~~~l~~~G~iv~~g~ 325 (392)
.+|+|+...+ .+..+.++|+++|+++.+..
T Consensus 121 ~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~ 159 (239)
T PRK00216 121 SFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF 159 (239)
T ss_pred CccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence 6899875422 14778889999999987643
No 255
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.24 E-value=0.25 Score=47.34 Aligned_cols=91 Identities=19% Similarity=0.244 Sum_probs=57.3
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcC----CeEEEEeC--CcccHHHHHhcCCc--------------EEEeCCC------C
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFG----ASRVAATS--STRNLEFLKSLGAD--------------LAIDYTK------D 288 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G----~~vv~~~~--~~~~~~~~~~~G~~--------------~vi~~~~------~ 288 (392)
+|.|.| .|.+|....+++.. .+ .+++.+.. +.+.+.++.++.-. .+++.+. .
T Consensus 1 ~IaInG-fGrIGR~vlr~l~e-~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~ 78 (325)
T TIGR01532 1 RVAING-FGRIGRNVLRALYE-SGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSP 78 (325)
T ss_pred CEEEEC-CCHHHHHHHHHHHh-cCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcC
Confidence 478998 69999999998765 23 55665543 33344555443210 1111111 1
Q ss_pred ccccC---CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCC
Q 016265 289 NFEDL---PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 289 ~~~~~---~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~ 327 (392)
+..++ ..++|+||+|+|. .+.+.++++.|++.|.++.+.
T Consensus 79 ~p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~ 123 (325)
T TIGR01532 79 TPEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG 123 (325)
T ss_pred ChhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence 11111 1389999999993 478888999999999998764
No 256
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.23 E-value=0.2 Score=45.70 Aligned_cols=73 Identities=21% Similarity=0.279 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~~-~~~-------~~~~ 296 (392)
.+.+|+|+||+|++|...++.... .|.+++++++++++.+.+ ++.+... .+ |..+.. ..+ ..++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAK-EGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 367999999999999998887766 499999998877765443 2223221 22 322211 111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 82 ~d~vi~~a~ 90 (258)
T PRK12429 82 VDILVNNAG 90 (258)
T ss_pred CCEEEECCC
Confidence 899998876
No 257
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.22 E-value=0.2 Score=46.27 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=64.6
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCc-EEEeCCCCccccCCCCccEEEec
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGAD-LAIDYTKDNFEDLPEKFDVVYDA 303 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~-~vi~~~~~~~~~~~~~~D~vid~ 303 (392)
+....++++++||=+| + |.|..+..+++...+.+++.++.++.-++.+++.-.. .++..+-..+. ....+|+|+..
T Consensus 24 l~~~~~~~~~~vLDiG-c-G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 100 (258)
T PRK01683 24 LARVPLENPRYVVDLG-C-GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFAN 100 (258)
T ss_pred HhhCCCcCCCEEEEEc-c-cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEc
Confidence 3455678899999997 4 4578888888774357899999998888877654321 22222211221 23479999865
Q ss_pred Cc---------cHHHHHHhcccCCeEEEE
Q 016265 304 IG---------QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 304 ~G---------~~~~~~~~l~~~G~iv~~ 323 (392)
.. .+..+.++|++||+++..
T Consensus 101 ~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 101 ASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred cChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 33 147788899999998775
No 258
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.075 Score=49.04 Aligned_cols=43 Identities=26% Similarity=0.391 Sum_probs=35.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK 275 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~ 275 (392)
++.+++|+||+|++|...+..+.. .|++|+++++++++.+.+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~ 46 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAA-AGARLLLVGRNAEKLEALA 46 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEECCHHHHHHHH
Confidence 467899999999999988877666 5999999998877665543
No 259
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.093 Score=47.42 Aligned_cols=73 Identities=22% Similarity=0.306 Sum_probs=47.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcC---CcEEE--eCCCC-cccc-------CCCCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLG---ADLAI--DYTKD-NFED-------LPEKF 297 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G---~~~vi--~~~~~-~~~~-------~~~~~ 297 (392)
.+.+++|+||+|++|...++.+.. .|++|+++++++++++.+ +++. .-+.+ |..+. .+.+ ...++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLA-EGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-CCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999998887766 499999988877765544 3332 11222 22221 1111 12378
Q ss_pred cEEEecCc
Q 016265 298 DVVYDAIG 305 (392)
Q Consensus 298 D~vid~~G 305 (392)
|++|.+.|
T Consensus 84 d~vi~~ag 91 (237)
T PRK07326 84 DVLIANAG 91 (237)
T ss_pred CEEEECCC
Confidence 99998865
No 260
>PRK06194 hypothetical protein; Provisional
Probab=95.16 E-value=0.097 Score=48.95 Aligned_cols=73 Identities=21% Similarity=0.375 Sum_probs=46.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-Hh---cCCcE-EE--eCCCC-ccccC-------CCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KS---LGADL-AI--DYTKD-NFEDL-------PEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~---~G~~~-vi--~~~~~-~~~~~-------~~~ 296 (392)
.+.++||+||+|++|...+..+.. .|++|++++++.++++.. .+ .|... ++ |..+. .+.+. .++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAA-LGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 367899999999999998877666 599999988876654433 22 23322 22 22221 11111 235
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 84 id~vi~~Ag 92 (287)
T PRK06194 84 VHLLFNNAG 92 (287)
T ss_pred CCEEEECCC
Confidence 899999876
No 261
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=95.14 E-value=0.056 Score=40.96 Aligned_cols=79 Identities=24% Similarity=0.242 Sum_probs=53.2
Q ss_pred CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcE---EEeCCCCccccCCCCccEEEecCc---------cHHHH
Q 016265 243 GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADL---AIDYTKDNFEDLPEKFDVVYDAIG---------QCDRA 310 (392)
Q Consensus 243 G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~---vi~~~~~~~~~~~~~~D~vid~~G---------~~~~~ 310 (392)
.+.|..+..+++. .+.+++.++.+++.++.+++..... +...+..++.-..+.||+|+.... .++++
T Consensus 5 ~G~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~~~~~~l~e~ 83 (95)
T PF08241_consen 5 CGTGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLEDPEAALREI 83 (95)
T ss_dssp -TTSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSSHHHHHHHHH
T ss_pred CcCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCccccccccccccccceeeccCHHHHHHHH
Confidence 3478999999986 5889999999999888887654332 333222223222457999987643 14789
Q ss_pred HHhcccCCeEEE
Q 016265 311 VKAIKEGGTVVA 322 (392)
Q Consensus 311 ~~~l~~~G~iv~ 322 (392)
.+.|+|||+++.
T Consensus 84 ~rvLk~gG~l~~ 95 (95)
T PF08241_consen 84 YRVLKPGGRLVI 95 (95)
T ss_dssp HHHEEEEEEEEE
T ss_pred HHHcCcCeEEeC
Confidence 999999999873
No 262
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.091 Score=47.34 Aligned_cols=73 Identities=18% Similarity=0.255 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHH----HHhcCCcEE-EeCCCC-ccc----c---CCCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEF----LKSLGADLA-IDYTKD-NFE----D---LPEKFD 298 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~----~~~~G~~~v-i~~~~~-~~~----~---~~~~~D 298 (392)
+|.++||+||+|++|...++.+.. .|+++++++++.++... ++..+...+ .|..+. ... + ...++|
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAA-RGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHH-CCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 478999999999999998887766 49999999887665332 222333221 232221 111 1 123689
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
++|.+.|
T Consensus 85 ~vi~~ag 91 (239)
T PRK12828 85 ALVNIAG 91 (239)
T ss_pred EEEECCc
Confidence 9998876
No 263
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.08 E-value=0.038 Score=54.42 Aligned_cols=87 Identities=28% Similarity=0.317 Sum_probs=54.6
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHh--cCCc---EEEeCCCC-ccccCCCCccEEEecCcc--
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKS--LGAD---LAIDYTKD-NFEDLPEKFDVVYDAIGQ-- 306 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~--~G~~---~vi~~~~~-~~~~~~~~~D~vid~~G~-- 306 (392)
|+|+|+ |.+|..+++.+...... ++++++++.++.+.+.+ .+.. ..+|..+. ...+..++.|+||+|+|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 789997 99999999988764334 78888999998776653 2221 23343332 234445678999999983
Q ss_pred -HHHHHHhcccCCeEEEE
Q 016265 307 -CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 307 -~~~~~~~l~~~G~iv~~ 323 (392)
...+-.|++.|-.++..
T Consensus 80 ~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDT 97 (386)
T ss_dssp HHHHHHHHHHHT-EEEES
T ss_pred hHHHHHHHHHhCCCeecc
Confidence 34455566677777773
No 264
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.08 E-value=0.094 Score=49.34 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHH-HhcCCcE-EEeCCC-CccccCCCCccEEEecCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFL-KSLGADL-AIDYTK-DNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~-~~~G~~~-vi~~~~-~~~~~~~~~~D~vid~~G 305 (392)
.+.+|+|+| +|+.|.+++..+... |+ +++++.++.+|.+.+ ++++... +..... ++.......+|+||+|+.
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~-G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASL-GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCC
Confidence 578999998 899999988877774 86 567777887776554 3443211 111111 112223357899999976
No 265
>PRK08017 oxidoreductase; Provisional
Probab=95.07 E-value=0.06 Score=49.31 Aligned_cols=71 Identities=21% Similarity=0.309 Sum_probs=51.0
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE-EeCCCCc-c----cc----CCCCccEEEec
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA-IDYTKDN-F----ED----LPEKFDVVYDA 303 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v-i~~~~~~-~----~~----~~~~~D~vid~ 303 (392)
++|+|+||+|++|...++.+.. .|++++++.++.++++.+++.|++.+ .|..+.. . .. ....+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKR-RGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 5799999999999999988877 49999999998888887777775433 2333221 1 11 12457888887
Q ss_pred Cc
Q 016265 304 IG 305 (392)
Q Consensus 304 ~G 305 (392)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 65
No 266
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.06 E-value=0.11 Score=48.62 Aligned_cols=73 Identities=19% Similarity=0.265 Sum_probs=45.7
Q ss_pred CCCeEEEEcCC--CcHHHHHHHHHHHhcCCeEEEEeCCcc---cHHHH-HhcCCcEEE--eCCCCc-ccc-------CCC
Q 016265 232 AGKSILVLNGS--GGVGSLVIQLAKQVFGASRVAATSSTR---NLEFL-KSLGADLAI--DYTKDN-FED-------LPE 295 (392)
Q Consensus 232 ~g~~VlI~Ga~--G~vG~~aiqlak~~~G~~vv~~~~~~~---~~~~~-~~~G~~~vi--~~~~~~-~~~-------~~~ 295 (392)
.|++++|+||+ +++|++.++.... .|++|+++.++++ +++.+ +++|....+ |..+.. ..+ ..+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~-~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFE-QGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHH-CCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999986 7999998776655 4999988877642 33333 344533333 333221 111 124
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
.+|++|++.|
T Consensus 83 ~iDilVnnAG 92 (274)
T PRK08415 83 KIDFIVHSVA 92 (274)
T ss_pred CCCEEEECCc
Confidence 6899998876
No 267
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.11 Score=48.19 Aligned_cols=40 Identities=28% Similarity=0.465 Sum_probs=33.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
++.+++|+||+|++|...++.+.. .|++|+++++++++.+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~-~G~~V~~~~r~~~~~~ 47 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFAR-AGANVAVASRSQEKVD 47 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHH
Confidence 578999999999999998887766 5999999988766544
No 268
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.19 Score=46.02 Aligned_cols=39 Identities=23% Similarity=0.252 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEe-CCcccH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAAT-SSTRNL 271 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~-~~~~~~ 271 (392)
.|.+++|+||+|++|.+.++.... .|+++++.. +..++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~-~G~~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLAN-DGALVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCeEEEEcCCCHHHH
Confidence 468999999999999998887666 499888764 343443
No 269
>PLN02928 oxidoreductase family protein
Probab=95.04 E-value=0.073 Score=51.64 Aligned_cols=91 Identities=20% Similarity=0.299 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcC-----CcEEEe--CCCCccccCCCCccEEEecC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLG-----ADLAID--YTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G-----~~~vi~--~~~~~~~~~~~~~D~vid~~ 304 (392)
.|.+|+|+| .|.+|...++.++. +|++|++.+++..+.. ...++ .....+ ....++.+.....|+|+.++
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~a-fG~~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRP-FGVKLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhh-CCCEEEEECCCCChhh-hhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 578999998 99999999999998 6999998887533211 11111 000010 01123444556789999886
Q ss_pred cc-------H-HHHHHhcccCCeEEEEcC
Q 016265 305 GQ-------C-DRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 305 G~-------~-~~~~~~l~~~G~iv~~g~ 325 (392)
.. + ...+..|++|..+|.++-
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 51 1 678899999998887753
No 270
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.04 E-value=0.099 Score=49.99 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=34.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.+.+++|+||+|++|...++.+.. .|++|+++.++.++.+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~-~G~~V~~~~r~~~~~~~~ 46 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAK-RGWHVIMACRNLKKAEAA 46 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEECCHHHHHHH
Confidence 467899999999999998876665 499999998887765543
No 271
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.03 E-value=0.045 Score=49.94 Aligned_cols=98 Identities=22% Similarity=0.300 Sum_probs=57.7
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHHh----cCCcE--EEeCCCCccccCCCCcc
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLKS----LGADL--AIDYTKDNFEDLPEKFD 298 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~~----~G~~~--vi~~~~~~~~~~~~~~D 298 (392)
+....++|++||=.| +|.|.++..+++.+. ..+++.++.+++=++.+++ .|... .+..+.++..-..+.||
T Consensus 41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD 118 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFD 118 (233)
T ss_dssp HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EE
T ss_pred hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCcee
Confidence 445788999999885 556888888888742 2578899999987777753 33221 11112222222235699
Q ss_pred EEEecCc---------cHHHHHHhcccCCeEEEEcC
Q 016265 299 VVYDAIG---------QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 299 ~vid~~G---------~~~~~~~~l~~~G~iv~~g~ 325 (392)
+|.-+.| .+.++.+.|+|||+++.+..
T Consensus 119 ~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~ 154 (233)
T PF01209_consen 119 AVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEF 154 (233)
T ss_dssp EEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeec
Confidence 9998777 15789999999999887643
No 272
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.1 Score=48.02 Aligned_cols=42 Identities=26% Similarity=0.271 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.+.+++|+||+|++|...++.... .|++++++++++++.+.+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~-~G~~vv~~~r~~~~~~~~ 47 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAR-EGAAVALADLDAALAERA 47 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 478999999999999998877666 499999988877665543
No 273
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.03 E-value=0.07 Score=50.00 Aligned_cols=71 Identities=25% Similarity=0.317 Sum_probs=46.9
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHH-hcCCcE----EEeCCCCccccCCCCccEEEec
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLK-SLGADL----AIDYTKDNFEDLPEKFDVVYDA 303 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~-~~G~~~----vi~~~~~~~~~~~~~~D~vid~ 303 (392)
..+|++++|+| +||.+.+++.-++.. |+ +++++.++.+|.+.+. .++... ..... +.... ..+|++|+|
T Consensus 123 ~~~~~~vlilG-AGGAarAv~~aL~~~-g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~--~~~~~-~~~dliINa 197 (283)
T COG0169 123 DVTGKRVLILG-AGGAARAVAFALAEA-GAKRITVVNRTRERAEELADLFGELGAAVEAAALA--DLEGL-EEADLLINA 197 (283)
T ss_pred ccCCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccccccccccc--ccccc-cccCEEEEC
Confidence 34689999998 999999988888774 85 6777788888866654 343211 11111 11111 158999999
Q ss_pred Cc
Q 016265 304 IG 305 (392)
Q Consensus 304 ~G 305 (392)
+.
T Consensus 198 Tp 199 (283)
T COG0169 198 TP 199 (283)
T ss_pred CC
Confidence 75
No 274
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.01 E-value=0.13 Score=40.52 Aligned_cols=86 Identities=23% Similarity=0.336 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc--H-H
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ--C-D 308 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~--~-~ 308 (392)
.|.+|||.| +|.+|..-++.+.. .|+++.++.... +..+ +.-... ...+.+...++|+||-+++. + +
T Consensus 6 ~~~~vlVvG-gG~va~~k~~~Ll~-~gA~v~vis~~~---~~~~--~~i~~~---~~~~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVG-GGPVAARKARLLLE-AGAKVTVISPEI---EFSE--GLIQLI---RREFEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEE-ESHHHHHHHHHHCC-CTBEEEEEESSE---HHHH--TSCEEE---ESS-GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCch---hhhh--hHHHHH---hhhHHHHHhhheEEEecCCCHHHHH
Confidence 578999999 89999998888877 599998888765 2222 211111 12233445689999999984 3 4
Q ss_pred HHHHhcccCCeEEEEcCCC
Q 016265 309 RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 309 ~~~~~l~~~G~iv~~g~~~ 327 (392)
...+..+..|.++......
T Consensus 76 ~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDP 94 (103)
T ss_dssp HHHHHHHHTTSEEEETT-C
T ss_pred HHHHHHhhCCEEEEECCCc
Confidence 5555556688888775543
No 275
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.01 E-value=0.056 Score=57.11 Aligned_cols=73 Identities=16% Similarity=0.381 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc---------------------cHHHHHhcCCcEEEeCC---C
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR---------------------NLEFLKSLGADLAIDYT---K 287 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~---------------------~~~~~~~~G~~~vi~~~---~ 287 (392)
.|++|+|+| +|+.|+.++..++. .|.+|++++..+. +.+.++++|.+...+.. +
T Consensus 326 ~~~~VaIIG-aGpAGLsaA~~L~~-~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 326 SDKRVAIIG-AGPAGLACADVLAR-NGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 588999998 99999999999888 4999888876432 34556778876544321 1
Q ss_pred CccccCCCCccEEEecCcc
Q 016265 288 DNFEDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 288 ~~~~~~~~~~D~vid~~G~ 306 (392)
....+...++|.||.++|.
T Consensus 404 i~~~~~~~~~DavilAtGa 422 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGT 422 (654)
T ss_pred CCHHHHHhcCCEEEEeCCC
Confidence 1222333579999999884
No 276
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.01 E-value=0.11 Score=47.95 Aligned_cols=70 Identities=26% Similarity=0.319 Sum_probs=45.1
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcEEE--eCCCC-cccc-------CCCCccEE
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADLAI--DYTKD-NFED-------LPEKFDVV 300 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~vi--~~~~~-~~~~-------~~~~~D~v 300 (392)
+++|+||++++|...++.... .|++|+++.+++++++.+. +.+..+.+ |..+. .+.+ ..+++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLK-KGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 689999999999987776666 4999999888877654432 23322223 22221 1111 12468999
Q ss_pred EecCc
Q 016265 301 YDAIG 305 (392)
Q Consensus 301 id~~G 305 (392)
|++.|
T Consensus 81 i~naG 85 (259)
T PRK08340 81 VWNAG 85 (259)
T ss_pred EECCC
Confidence 98876
No 277
>PRK04148 hypothetical protein; Provisional
Probab=95.01 E-value=0.1 Score=43.11 Aligned_cols=73 Identities=16% Similarity=0.164 Sum_probs=50.9
Q ss_pred CCCCCCeEEEEcCCCcHHH-HHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc
Q 016265 229 GFSAGKSILVLNGSGGVGS-LVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~-~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G 305 (392)
....+.++++.| .| .|. .|..|+ . .|.+|++++.++...+.+++.+.+.+.+---..-.++-+++|+++.+-.
T Consensus 13 ~~~~~~kileIG-~G-fG~~vA~~L~-~-~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirp 86 (134)
T PRK04148 13 EKGKNKKIVELG-IG-FYFKVAKKLK-E-SGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP 86 (134)
T ss_pred ccccCCEEEEEE-ec-CCHHHHHHHH-H-CCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCC
Confidence 344568899998 88 786 555555 5 3999999999999999999888765553211111223467899888754
No 278
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.29 Score=44.38 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
++.+++|+||+|++|...+..... .|++++++.++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~-~g~~v~~~~~~ 38 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAA-DGFAVAVNYAG 38 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEecCC
Confidence 567999999999999998887766 49988877654
No 279
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.99 E-value=0.31 Score=45.69 Aligned_cols=95 Identities=23% Similarity=0.264 Sum_probs=65.5
Q ss_pred ccchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
.+||.....+..++..++ -.|.+|+|+|.+.-+|.-.+.++.. .|++|+++.+.... ..
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~-~gatVtv~~s~t~~-------------------l~ 196 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQ-KNASVTILHSRSKD-------------------MA 196 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHH-CCCeEEEEeCCchh-------------------HH
Confidence 356665556666666553 4689999999666699999999988 59988888754321 22
Q ss_pred cCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCCC
Q 016265 292 DLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~~ 327 (392)
+..+.+|+||.++|... ---+.+++|..++.+|...
T Consensus 197 ~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 197 SYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCc
Confidence 23356799999998321 1114588888888888654
No 280
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.97 E-value=0.11 Score=48.07 Aligned_cols=36 Identities=28% Similarity=0.251 Sum_probs=28.3
Q ss_pred CCCeEEEEcCCC--cHHHHHHHHHHHhcCCeEEEEeCCc
Q 016265 232 AGKSILVLNGSG--GVGSLVIQLAKQVFGASRVAATSST 268 (392)
Q Consensus 232 ~g~~VlI~Ga~G--~vG~~aiqlak~~~G~~vv~~~~~~ 268 (392)
.|++++|+||++ ++|.+.++.+.. .|++|+++.+++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~-~G~~v~~~~r~~ 44 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKK-HGAELWFTYQSE 44 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHH-cCCEEEEEeCch
Confidence 578999999886 899987766555 499988877653
No 281
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.26 Score=46.42 Aligned_cols=37 Identities=27% Similarity=0.335 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST 268 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~ 268 (392)
-.|.++||+||+|++|...+..... .|++|+++.++.
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~-~G~~V~l~~r~~ 80 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAK-EGADIAIVYLDE 80 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCc
Confidence 3578999999999999987776655 499998887654
No 282
>PRK08628 short chain dehydrogenase; Provisional
Probab=94.93 E-value=0.12 Score=47.50 Aligned_cols=73 Identities=25% Similarity=0.315 Sum_probs=47.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh---cCCc-EEE--eCCCCc-ccc-------CCCCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS---LGAD-LAI--DYTKDN-FED-------LPEKF 297 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~---~G~~-~vi--~~~~~~-~~~-------~~~~~ 297 (392)
.|.++||+||+|++|...++.... .|++++++++++.+.+..++ .|.. ..+ |..+.. ... ...++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAE-EGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-cCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 467999999999999987766655 49999988887766544333 3432 122 222211 111 12468
Q ss_pred cEEEecCc
Q 016265 298 DVVYDAIG 305 (392)
Q Consensus 298 D~vid~~G 305 (392)
|++|.+.|
T Consensus 85 d~vi~~ag 92 (258)
T PRK08628 85 DGLVNNAG 92 (258)
T ss_pred CEEEECCc
Confidence 99999987
No 283
>PLN03075 nicotianamine synthase; Provisional
Probab=94.93 E-value=0.17 Score=47.58 Aligned_cols=93 Identities=17% Similarity=0.178 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHHhcC-----CcEEEeCCCCcccc---CCCCccEEE
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLKSLG-----ADLAIDYTKDNFED---LPEKFDVVY 301 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~~~G-----~~~vi~~~~~~~~~---~~~~~D~vi 301 (392)
.+.++|+-+| +|+.|+.++.+++.++ +.+++.++.+++..+.+++.- ...-+.+...+..+ ..++||+||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF 200 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF 200 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence 4779999998 9999998888886542 446778888888877776532 21212222122111 135799999
Q ss_pred ecC--c--------cHHHHHHhcccCCeEEEEc
Q 016265 302 DAI--G--------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 302 d~~--G--------~~~~~~~~l~~~G~iv~~g 324 (392)
-.+ + .++...+.|+|||.++.-.
T Consensus 201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 764 1 1478889999999987664
No 284
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.92 E-value=0.085 Score=50.53 Aligned_cols=85 Identities=22% Similarity=0.306 Sum_probs=63.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc-c----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG-Q---- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G-~---- 306 (392)
.|.++.|+| .|.||++.++.++. +|++++.-++++. .+..+..++.++ + +.++.+..|++.-... .
T Consensus 145 ~gktvGIiG-~GrIG~avA~r~~~-Fgm~v~y~~~~~~-~~~~~~~~~~y~----~--l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 145 RGKTLGIIG-LGRIGQAVARRLKG-FGMKVLYYDRSPN-PEAEKELGARYV----D--LDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhc-CCCEEEEECCCCC-hHHHhhcCceec----c--HHHHHHhCCEEEEeCCCChHHh
Confidence 489999998 99999999999996 8999999998765 333344444432 1 4455567788877654 1
Q ss_pred -H--HHHHHhcccCCeEEEEcC
Q 016265 307 -C--DRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 307 -~--~~~~~~l~~~G~iv~~g~ 325 (392)
+ ...++.|++++.+|..+-
T Consensus 216 hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCC
Confidence 2 678889999999987753
No 285
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.12 Score=46.77 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCC-cccc--------CCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKD-NFED--------LPE 295 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~-~~~~--------~~~ 295 (392)
.|.+++|+||++++|.+.+.-... .|++++++.+++++++.+ ++.|.+. .+ |..+. ...+ .+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~-~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFAR-LGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999987766655 499999988877766543 2335332 22 22221 1111 122
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
.+|++|.+.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999875
No 286
>PRK07985 oxidoreductase; Provisional
Probab=94.90 E-value=0.27 Score=46.45 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=28.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.|.+++|+||+|++|...++.+.. .|++|+++.++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~-~G~~Vi~~~~~ 82 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAR-EGADVAISYLP 82 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-CCCEEEEecCC
Confidence 567999999999999998877766 49998887643
No 287
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.13 Score=47.30 Aligned_cols=73 Identities=23% Similarity=0.324 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----h-cCCc-EEE--eCCCC-ccc---cCCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----S-LGAD-LAI--DYTKD-NFE---DLPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~-~G~~-~vi--~~~~~-~~~---~~~~~~D~ 299 (392)
.|.+++|+|++|++|...++.... .|++|+++.++.++.+.+. + .+.. ..+ |..+. .+. +....+|+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAA-EGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 478999999999999998887766 4999999988777655432 1 2322 222 22221 111 11246899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 85 lv~~ag 90 (259)
T PRK06125 85 LVNNAG 90 (259)
T ss_pred EEECCC
Confidence 999876
No 288
>PRK08643 acetoin reductase; Validated
Probab=94.88 E-value=0.12 Score=47.29 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=47.2
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE-EE--eCCCCc-c----cc---CCCCc
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL-AI--DYTKDN-F----ED---LPEKF 297 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~-vi--~~~~~~-~----~~---~~~~~ 297 (392)
+.+++|+||+|++|...++.+.. .|+++++++++.++.+.+. +.+... .+ |..+.. . .+ ..+++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVE-DGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999999999998887766 5999999988776654432 233221 12 322221 1 11 12468
Q ss_pred cEEEecCc
Q 016265 298 DVVYDAIG 305 (392)
Q Consensus 298 D~vid~~G 305 (392)
|++|.+.|
T Consensus 81 d~vi~~ag 88 (256)
T PRK08643 81 NVVVNNAG 88 (256)
T ss_pred CEEEECCC
Confidence 99999876
No 289
>PRK05717 oxidoreductase; Validated
Probab=94.86 E-value=0.13 Score=47.26 Aligned_cols=73 Identities=18% Similarity=0.215 Sum_probs=46.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcE-E--EeCCCCc-c----ccC---CCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADL-A--IDYTKDN-F----EDL---PEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~-v--i~~~~~~-~----~~~---~~~~D~ 299 (392)
.|.+++|+||+|++|...+..... .|+++++++++..+.+.+ ++++... . .|..+.. . .+. -+.+|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIA-EGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 478999999999999987777666 499998888776654443 3444321 1 2322211 1 111 235899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 88 li~~ag 93 (255)
T PRK05717 88 LVCNAA 93 (255)
T ss_pred EEECCC
Confidence 998876
No 290
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.83 E-value=0.061 Score=53.25 Aligned_cols=73 Identities=25% Similarity=0.336 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCc-EE--EeCCCC-ccccCCCCccEEEecCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGAD-LA--IDYTKD-NFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~-~v--i~~~~~-~~~~~~~~~D~vid~~G 305 (392)
.|++|+|+||+|++|.+.+..... .|++++++++++++++.. ...+.. .. .|..+. ...+..+++|++|.+.|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~-~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQ-QGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 478999999999999998876655 499999988876655432 111111 12 233222 22233457999998765
No 291
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.12 Score=49.00 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=32.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
.|.+|+|+||+|++|...++.... .|++++++.++.++.+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~-~G~~vi~~~r~~~~~~ 54 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAA-KGAHVVLAVRNLDKGK 54 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHH
Confidence 578999999999999998876655 4999988888766644
No 292
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.13 Score=47.98 Aligned_cols=73 Identities=22% Similarity=0.350 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCC-cccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKD-NFED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~-~~~~-------~~~~ 296 (392)
.|.+++|+||+|++|...+..+.. .|++|++++++.++++.+ +..|... .+ |..+. .+.+ ..+.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~-~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFAR-RGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999998877666 599999888876665433 2234332 12 32221 1111 1236
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|++.|
T Consensus 84 id~li~nAg 92 (275)
T PRK05876 84 VDVVFSNAG 92 (275)
T ss_pred CCEEEECCC
Confidence 899999876
No 293
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.83 E-value=0.13 Score=47.63 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=27.8
Q ss_pred CCCeEEEEcC--CCcHHHHHHHHHHHhcCCeEEEEeCCc
Q 016265 232 AGKSILVLNG--SGGVGSLVIQLAKQVFGASRVAATSST 268 (392)
Q Consensus 232 ~g~~VlI~Ga--~G~vG~~aiqlak~~~G~~vv~~~~~~ 268 (392)
.|.+++|+|| ++++|.+.++.... .|++|++..+.+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~-~G~~v~~~~~~~ 42 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACRE-QGAELAFTYVVD 42 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHH-CCCEEEEEcCcH
Confidence 5789999996 66999997776655 499988876543
No 294
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=94.81 E-value=0.13 Score=47.25 Aligned_cols=73 Identities=23% Similarity=0.311 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~~-~~~-------~~~~ 296 (392)
.|.+|||+||+|++|...++.+.. .|++|++..+++++.+.+ ++.|... .+ |..+.. +.+ ....
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQ-AGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999998887766 499999888877655433 2333221 22 332211 111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 88 ~d~li~~ag 96 (255)
T PRK07523 88 IDILVNNAG 96 (255)
T ss_pred CCEEEECCC
Confidence 899999876
No 295
>PRK07774 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.13 Score=46.78 Aligned_cols=41 Identities=27% Similarity=0.322 Sum_probs=33.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEF 273 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~ 273 (392)
.+.+++|+||+|++|...++.... .|++++++.+++++.+.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~-~g~~vi~~~r~~~~~~~ 45 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAR-EGASVVVADINAEGAER 45 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHH
Confidence 467899999999999998887766 49999999887665433
No 296
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.79 E-value=0.12 Score=49.45 Aligned_cols=85 Identities=15% Similarity=0.253 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...++.++. +|.++++.++..++.. +.+... ...++.+.....|+|+.+...
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~a-fG~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQT-WGFPLRCWSRSRKSWP-----GVQSFA--GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCCCCCC-----Cceeec--ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 578999998 99999999999998 6999998886543321 222221 122344555678999988751
Q ss_pred --H-HHHHHhcccCCeEEEEcC
Q 016265 307 --C-DRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g~ 325 (392)
+ ...++.|++|..+|.++-
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCC
Confidence 1 467888999988887753
No 297
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.16 Score=46.04 Aligned_cols=74 Identities=22% Similarity=0.208 Sum_probs=48.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE-EE--eCCCCc-ccc-------CCC
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL-AI--DYTKDN-FED-------LPE 295 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~-vi--~~~~~~-~~~-------~~~ 295 (392)
..+.+++|+||+|++|...+..+.. .|.+|+++++++++.+.+. +.+... .+ |..+.. +.. ...
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAK-AGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3467899999999999998887766 5999999998776654432 223221 22 322211 111 123
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
++|++|.+.|
T Consensus 83 ~id~lv~~ag 92 (241)
T PRK07454 83 CPDVLINNAG 92 (241)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 298
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.71 E-value=0.49 Score=47.31 Aligned_cols=98 Identities=22% Similarity=0.168 Sum_probs=61.5
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-E--EeCCCCcccc--CCCC
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-A--IDYTKDNFED--LPEK 296 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-v--i~~~~~~~~~--~~~~ 296 (392)
....+++|++||=.| +| .|-.+.++++.+.+++++.++.++++++.+ +++|.+. + .+.+...... ..+.
T Consensus 232 ~~L~~~~g~~VLDlc-ag-~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~~~~~~~ 309 (426)
T TIGR00563 232 TWLAPQNEETILDAC-AA-PGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQWAENEQ 309 (426)
T ss_pred HHhCCCCCCeEEEeC-CC-ccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccccccccc
Confidence 344678999998886 44 365666777664336888999999987766 4467652 2 2222111111 2346
Q ss_pred ccEEEe---cCc--c--------------------------HHHHHHhcccCCeEEEEcC
Q 016265 297 FDVVYD---AIG--Q--------------------------CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 297 ~D~vid---~~G--~--------------------------~~~~~~~l~~~G~iv~~g~ 325 (392)
||.||- |+| . +..++++|++||++|....
T Consensus 310 fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc 369 (426)
T TIGR00563 310 FDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC 369 (426)
T ss_pred cCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999873 444 1 2457788999999986543
No 299
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.70 E-value=0.12 Score=47.45 Aligned_cols=73 Identities=25% Similarity=0.285 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH---hcCCcE---EEeCCCCc-ccc-------CCCCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK---SLGADL---AIDYTKDN-FED-------LPEKF 297 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~---~~G~~~---vi~~~~~~-~~~-------~~~~~ 297 (392)
.+.+++|+||+|++|...++.+.. .|++|+++++++...+..+ ..|.+. ..|..+.. ..+ ..+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAA-EGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999988877666 4999988887643323222 334332 22433321 111 12468
Q ss_pred cEEEecCc
Q 016265 298 DVVYDAIG 305 (392)
Q Consensus 298 D~vid~~G 305 (392)
|++|.+.|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999876
No 300
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.69 E-value=0.14 Score=46.97 Aligned_cols=73 Identities=30% Similarity=0.440 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCc-EEE--eCCCCc-cc----c---CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGAD-LAI--DYTKDN-FE----D---LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~-~vi--~~~~~~-~~----~---~~~~ 296 (392)
.|.++||+||+|++|...++.... .|++|++++++.++++.+. +.+.. ..+ |..+.. +. + ...+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGE-AGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999998887766 5999999988777655443 22322 122 333211 11 1 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 90 id~vi~~ag 98 (259)
T PRK08213 90 VDILVNNAG 98 (259)
T ss_pred CCEEEECCC
Confidence 899999876
No 301
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.69 E-value=0.093 Score=48.23 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=60.0
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc--CCcEE-EeCCC--CccccCC-CCccEEEec
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL--GADLA-IDYTK--DNFEDLP-EKFDVVYDA 303 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~--G~~~v-i~~~~--~~~~~~~-~~~D~vid~ 303 (392)
-..+.+|+|+||+|.+|...+..+.. .|.+|+++.++.++....... ++..+ .|..+ ..+.+.. .++|+||.+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLA-KGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA 92 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence 34468999999999999998887766 489998888877665433221 22222 24433 1222223 579999988
Q ss_pred Ccc----------------HHHHHHhccc--CCeEEEEcCC
Q 016265 304 IGQ----------------CDRAVKAIKE--GGTVVALTGA 326 (392)
Q Consensus 304 ~G~----------------~~~~~~~l~~--~G~iv~~g~~ 326 (392)
.|. ...+++.++. .+++|.++..
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 762 1234444443 3688887643
No 302
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.68 E-value=0.16 Score=46.75 Aligned_cols=99 Identities=25% Similarity=0.376 Sum_probs=62.7
Q ss_pred HHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC--CeEEEEeCCcccHHHHH----hcCCcEEEe---CC--CCccc-
Q 016265 224 GLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFG--ASRVAATSSTRNLEFLK----SLGADLAID---YT--KDNFE- 291 (392)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G--~~vv~~~~~~~~~~~~~----~~G~~~vi~---~~--~~~~~- 291 (392)
.+...+++||++|+=.| .|.|.++..+++.+ | .+|+-.+..+++.+.++ ..|.+..+. .+ ++.+.
T Consensus 32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v-~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAV-GPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE----TTSHHHHHHHHHH-TTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--ST
T ss_pred HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHh-CCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccc
Confidence 34578899999999876 44588888899886 4 47888888888877664 456542221 11 12231
Q ss_pred cCCCCccEEEecCc----cHHHHHHhc-ccCCeEEEEcC
Q 016265 292 DLPEKFDVVYDAIG----QCDRAVKAI-KEGGTVVALTG 325 (392)
Q Consensus 292 ~~~~~~D~vid~~G----~~~~~~~~l-~~~G~iv~~g~ 325 (392)
+....+|.||-=.. .+..+.++| ++||+++.+..
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 22356887774333 468999999 89999998854
No 303
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.68 E-value=0.25 Score=46.15 Aligned_cols=90 Identities=18% Similarity=0.252 Sum_probs=56.9
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-Hhc---CCcEEEeCCCCccccCCCCccEEEecCc
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSL---GADLAIDYTKDNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~---G~~~vi~~~~~~~~~~~~~~D~vid~~G 305 (392)
...+.+++|+| +|++|.+.+..+.. .|++++++.++.++.+.+ +++ |....+...+ .....+|+||+|++
T Consensus 114 ~~~~k~vliiG-aGg~g~aia~~L~~-~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivInatp 187 (270)
T TIGR00507 114 LRPNQRVLIIG-AGGAARAVALPLLK-ADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE----LPLHRVDLIINATS 187 (270)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh----hcccCccEEEECCC
Confidence 34578999999 68999998877766 488888888887775444 333 3222222111 11246899999986
Q ss_pred c-H----H---HHHHhcccCCeEEEEcC
Q 016265 306 Q-C----D---RAVKAIKEGGTVVALTG 325 (392)
Q Consensus 306 ~-~----~---~~~~~l~~~G~iv~~g~ 325 (392)
. + + .....++++..++.+..
T Consensus 188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 188 AGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 2 1 1 12345777777776643
No 304
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.15 Score=46.70 Aligned_cols=42 Identities=26% Similarity=0.387 Sum_probs=34.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.+.+|+|+||+|++|...++.+.. .|++|+++.++.++.+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~-~G~~Vi~~~r~~~~~~~~ 48 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQ-QGAHVIVSSRKLDGCQAV 48 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 367899999999999998888777 499999998876665443
No 305
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.66 E-value=0.27 Score=46.78 Aligned_cols=85 Identities=18% Similarity=0.261 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc----
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ---- 306 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~---- 306 (392)
-.|.+|.|+| .|.+|.+.++.++. +|.+|++..+.....+.++..|+.. . ++.+..+..|+|+-++..
T Consensus 14 LkgKtVGIIG-~GsIG~amA~nL~d-~G~~ViV~~r~~~s~~~A~~~G~~v-~-----sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIG-YGSQGHAQAQNLRD-SGVEVVVGVRPGKSFEVAKADGFEV-M-----SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEe-EcHHHHHHHHHHHH-CcCEEEEEECcchhhHHHHHcCCEE-C-----CHHHHHhcCCEEEEeCCChHHH
Confidence 4689999998 99999999999998 6999988876655556666777632 1 345556678999988752
Q ss_pred --H-HHHHHhcccCCeEEEE
Q 016265 307 --C-DRAVKAIKEGGTVVAL 323 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~ 323 (392)
+ +..+..|++|..++.-
T Consensus 86 ~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHHhcCCCCCEEEEC
Confidence 2 4577788887766544
No 306
>PRK08264 short chain dehydrogenase; Validated
Probab=94.66 E-value=0.13 Score=46.59 Aligned_cols=70 Identities=21% Similarity=0.352 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCCc-EEE--eCCCC-cccc---CCCCccEEEec
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGAD-LAI--DYTKD-NFED---LPEKFDVVYDA 303 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~~-~vi--~~~~~-~~~~---~~~~~D~vid~ 303 (392)
.+.+++|+||+|++|...++.+.. .|. +|++++++.++.+. .+.. .++ |..+. .+.+ ..+.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~-~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLA-RGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 467899999999999998887776 498 88888887665543 3322 122 32221 1111 12358999988
Q ss_pred Cc
Q 016265 304 IG 305 (392)
Q Consensus 304 ~G 305 (392)
.|
T Consensus 81 ag 82 (238)
T PRK08264 81 AG 82 (238)
T ss_pred CC
Confidence 76
No 307
>PRK06483 dihydromonapterin reductase; Provisional
Probab=94.65 E-value=0.18 Score=45.65 Aligned_cols=72 Identities=11% Similarity=0.185 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc-HHHHHhcCCcE-EEeCCCC-cccc-------CCCCccEEEe
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN-LEFLKSLGADL-AIDYTKD-NFED-------LPEKFDVVYD 302 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~-~~~~~~~G~~~-vi~~~~~-~~~~-------~~~~~D~vid 302 (392)
+.++||+||+|++|...++.... .|++++++.+++++ .+.+++.|+.. ..|..+. ...+ ..+++|+++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLA-QGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 46899999999999998887666 49999998876543 33444555322 1232221 1111 1236899999
Q ss_pred cCc
Q 016265 303 AIG 305 (392)
Q Consensus 303 ~~G 305 (392)
+.|
T Consensus 81 ~ag 83 (236)
T PRK06483 81 NAS 83 (236)
T ss_pred CCc
Confidence 876
No 308
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.65 E-value=0.15 Score=47.50 Aligned_cols=73 Identities=22% Similarity=0.349 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCc-EEE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGAD-LAI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~-~vi--~~~~~~-~~~-------~~~~ 296 (392)
.+.+++|+||+|++|+..+..+.. .|++|+++++++++.+.+ ++.|.. ..+ |..+.. ... .-++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELAR-AGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999998887766 599999888876654433 223332 122 222211 111 1247
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 899998876
No 309
>PRK06720 hypothetical protein; Provisional
Probab=94.65 E-value=0.22 Score=42.98 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
.|..++|.||++++|...+..... .|+++++++++.++.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~-~G~~V~l~~r~~~~~~ 54 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAK-QGAKVIVTDIDQESGQ 54 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEECCHHHHH
Confidence 578999999999999998876656 4999988887766543
No 310
>PRK08589 short chain dehydrogenase; Validated
Probab=94.64 E-value=0.14 Score=47.65 Aligned_cols=72 Identities=22% Similarity=0.319 Sum_probs=45.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHH-H---HhcCCc-E--EEeCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEF-L---KSLGAD-L--AIDYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~-~---~~~G~~-~--vi~~~~~~-~~~-------~~~~ 296 (392)
.|.++||+||++++|...++.... .|++|+++.++ ++++. + ++.+.. . ..|..+.. ... ..++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~-~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQ-EGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999997776655 49999999887 44332 2 233322 1 22333221 111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|++.|
T Consensus 83 id~li~~Ag 91 (272)
T PRK08589 83 VDVLFNNAG 91 (272)
T ss_pred cCEEEECCC
Confidence 899999876
No 311
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.61 E-value=0.18 Score=47.15 Aligned_cols=74 Identities=12% Similarity=0.142 Sum_probs=48.7
Q ss_pred HHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHH-HhcCCcEEEeCCCCccccCCCCccEE
Q 016265 223 EGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFL-KSLGADLAIDYTKDNFEDLPEKFDVV 300 (392)
Q Consensus 223 ~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~-~~~G~~~vi~~~~~~~~~~~~~~D~v 300 (392)
.+|+..+...+++|+|+| +||.+.+++..++.. |+ ++.++.++.+|.+.+ +.++.+. . ... ....+|+|
T Consensus 112 ~~L~~~~~~~~~~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~~a~~la~~~~~~~----~-~~~--~~~~~dlv 182 (272)
T PRK12550 112 KLLASYQVPPDLVVALRG-SGGMAKAVAAALRDA-GFTDGTIVARNEKTGKALAELYGYEW----R-PDL--GGIEADIL 182 (272)
T ss_pred HHHHhcCCCCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhCCcc----h-hhc--ccccCCEE
Confidence 344444455567999998 899999988877774 87 477788888776655 3444211 1 011 12358999
Q ss_pred EecCc
Q 016265 301 YDAIG 305 (392)
Q Consensus 301 id~~G 305 (392)
|+|+.
T Consensus 183 INaTp 187 (272)
T PRK12550 183 VNVTP 187 (272)
T ss_pred EECCc
Confidence 99974
No 312
>PRK04266 fibrillarin; Provisional
Probab=94.60 E-value=0.47 Score=43.06 Aligned_cols=126 Identities=21% Similarity=0.247 Sum_probs=71.0
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc----CCcEEEeCCCCcc---ccCCCCcc
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL----GADLAIDYTKDNF---EDLPEKFD 298 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~----G~~~vi~~~~~~~---~~~~~~~D 298 (392)
+...+++|++||=.| +| .|..+..+++...+.+|+.++.+++.++.+.+. .--..+..+.... ....+.+|
T Consensus 66 ~~l~i~~g~~VlD~G-~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D 143 (226)
T PRK04266 66 KNFPIKKGSKVLYLG-AA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVD 143 (226)
T ss_pred hhCCCCCCCEEEEEc-cC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCC
Confidence 457889999998887 33 355667777764235788899888766644322 1112222111111 12235699
Q ss_pred EEEecCcc-------HHHHHHhcccCCeEEEE-cCCCCCCceEEEEeecHHHHHHHHHHHHCCCcccc
Q 016265 299 VVYDAIGQ-------CDRAVKAIKEGGTVVAL-TGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVKPI 358 (392)
Q Consensus 299 ~vid~~G~-------~~~~~~~l~~~G~iv~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~ 358 (392)
+++--... ++.+.+.|+|||+++.. -+. .+++.. ...+.+++.++++++..++..
T Consensus 144 ~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~v~~~----~~d~~~-~~~~~~~~~~~~l~~aGF~~i 206 (226)
T PRK04266 144 VIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLAIKAR----SIDVTK-DPKEIFKEEIRKLEEGGFEIL 206 (226)
T ss_pred EEEECCCChhHHHHHHHHHHHhcCCCcEEEEEEecc----cccCcC-CHHHHHHHHHHHHHHcCCeEE
Confidence 99843321 46777899999999873 111 011111 112444556677776555543
No 313
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.16 Score=46.64 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=33.8
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
+.+|+|+||+|++|...+..... .|+++++++++.++++.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~-~G~~v~~~~r~~~~~~~~ 42 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYAR-QGATLGLVARRTDALQAF 42 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 46899999999999998877766 499999999887776544
No 314
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.60 E-value=0.33 Score=45.13 Aligned_cols=100 Identities=16% Similarity=0.311 Sum_probs=65.5
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCC-cEEEeCCCCcccc--C-CCCc
Q 016265 222 YEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGA-DLAIDYTKDNFED--L-PEKF 297 (392)
Q Consensus 222 ~~al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~-~~vi~~~~~~~~~--~-~~~~ 297 (392)
-..+...++.++.+||=+| +| .|..+..+++. ++++++.++.++.-.+.+++... ...+.....++.+ . .+.|
T Consensus 42 ~~~l~~l~l~~~~~VLDiG-cG-~G~~a~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~F 118 (263)
T PTZ00098 42 TKILSDIELNENSKVLDIG-SG-LGGGCKYINEK-YGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTF 118 (263)
T ss_pred HHHHHhCCCCCCCEEEEEc-CC-CChhhHHHHhh-cCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCe
Confidence 3345677889999999997 54 46677778876 58899999999888777765321 1111111111111 1 2469
Q ss_pred cEEEec--C---c------cHHHHHHhcccCCeEEEEc
Q 016265 298 DVVYDA--I---G------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 298 D~vid~--~---G------~~~~~~~~l~~~G~iv~~g 324 (392)
|+|+.. . + .+..+.+.|+|||+++...
T Consensus 119 D~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d 156 (263)
T PTZ00098 119 DMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITD 156 (263)
T ss_pred EEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 999862 1 1 1467789999999998764
No 315
>PRK06181 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.12 Score=47.66 Aligned_cols=39 Identities=26% Similarity=0.390 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
+.+|||+||+|++|...++.+.. .|++|+++++++.+.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~-~g~~Vi~~~r~~~~~~ 39 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLAR-AGAQLVLAARNETRLA 39 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHH
Confidence 35799999999999998887766 5999999988766544
No 316
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.59 E-value=0.096 Score=48.95 Aligned_cols=43 Identities=37% Similarity=0.433 Sum_probs=35.2
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
-.|..++|+|++.++|.+.+..... .|++|+++.+++++++..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~-~Ga~v~i~~r~~~~~~~~ 48 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAK-AGAKVVITGRSEERLEET 48 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 3688999999999999887665555 499999999988886554
No 317
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.58 E-value=0.22 Score=48.01 Aligned_cols=98 Identities=18% Similarity=0.181 Sum_probs=61.6
Q ss_pred HHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccC---CCCccEE
Q 016265 225 LERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDL---PEKFDVV 300 (392)
Q Consensus 225 l~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~---~~~~D~v 300 (392)
++...+ .++.+||=+| +|. |..+..+++...+.+++.++.+++-++.+++.....-+.....+..+. .+.||+|
T Consensus 105 l~~~~l~~~~~~VLDLG-cGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvV 182 (340)
T PLN02490 105 LEPADLSDRNLKVVDVG-GGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRY 182 (340)
T ss_pred HhhcccCCCCCEEEEEe-cCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEE
Confidence 344443 4678999997 555 777788887743467888888888777776532111011111122221 3469998
Q ss_pred EecCc---------cHHHHHHhcccCCeEEEEc
Q 016265 301 YDAIG---------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 301 id~~G---------~~~~~~~~l~~~G~iv~~g 324 (392)
+.+.. .++++.+.|++||+++..+
T Consensus 183 Is~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~ 215 (340)
T PLN02490 183 VSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIG 215 (340)
T ss_pred EEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 86532 2478899999999988764
No 318
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=94.57 E-value=0.34 Score=42.87 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=58.8
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCcEEEeCCCCccc--cCCCCccEE
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGADLAIDYTKDNFE--DLPEKFDVV 300 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~~vi~~~~~~~~--~~~~~~D~v 300 (392)
.....++.+||-+| + |.|..+..+|+. |.++++++.++.-++.+++ .+... ++....++. ...+.||+|
T Consensus 25 ~l~~~~~~~vLDiG-c-G~G~~a~~La~~--g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~fD~I 99 (197)
T PRK11207 25 AVKVVKPGKTLDLG-C-GNGRNSLYLAAN--GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVVDLNNLTFDGEYDFI 99 (197)
T ss_pred hcccCCCCcEEEEC-C-CCCHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEecChhhCCcCCCcCEE
Confidence 34456678999997 4 448889999974 8899999998876665543 23221 111111111 123569999
Q ss_pred EecCc-----------cHHHHHHhcccCCeEEEE
Q 016265 301 YDAIG-----------QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 301 id~~G-----------~~~~~~~~l~~~G~iv~~ 323 (392)
+.... .+..+.++|++||.++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 97632 135777889999996544
No 319
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.57 E-value=0.19 Score=46.08 Aligned_cols=37 Identities=22% Similarity=0.226 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR 269 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~ 269 (392)
.|.+++|+||+|++|...++.+.. .|+++++++++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~-~G~~v~~~~r~~~ 43 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQ-AGADVALFDLRTD 43 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 477999999999999998887776 5999999887543
No 320
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.55 E-value=0.16 Score=46.65 Aligned_cols=45 Identities=24% Similarity=0.265 Sum_probs=32.8
Q ss_pred CCCeEEEEcCC--CcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc
Q 016265 232 AGKSILVLNGS--GGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL 277 (392)
Q Consensus 232 ~g~~VlI~Ga~--G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~ 277 (392)
.|++++|+||+ +++|.+.++.... .|++|+++.++++..+.++++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~-~G~~Vi~~~r~~~~~~~~~~~ 52 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKD-QGATVIYTYQNDRMKKSLQKL 52 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHH-CCCEEEEecCchHHHHHHHhh
Confidence 57899999988 7999997776655 499999887764333334443
No 321
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.55 E-value=0.14 Score=47.63 Aligned_cols=41 Identities=24% Similarity=0.208 Sum_probs=33.6
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
+.++||+||+|++|...+..+.. .|++|+++++++++.+.+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~-~G~~V~~~~r~~~~~~~~ 43 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAK-KGYLVIATMRNPEKQENL 43 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHh-CCCEEEEEeCCHHHHHHH
Confidence 57899999999999998887766 499999988877665443
No 322
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=94.54 E-value=0.089 Score=50.24 Aligned_cols=101 Identities=21% Similarity=0.280 Sum_probs=68.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc------
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG------ 305 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G------ 305 (392)
.|.+|.|+| .|.+|...+++++. +|++|++.++..... ..+. ...++.++-...|+|+-++.
T Consensus 144 ~gktvGIiG-~G~IG~~vA~~~~~-fgm~V~~~d~~~~~~----~~~~------~~~~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIG-LGTIGKRVAKIAQA-FGAKVVYYSTSGKNK----NEEY------ERVSLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhh-cCCEEEEECCCcccc----ccCc------eeecHHHHhhcCCEEEEeCCCCchhh
Confidence 588999998 99999999999998 799999888753211 1111 11234555567798887754
Q ss_pred c-H-HHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCcc
Q 016265 306 Q-C-DRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 306 ~-~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
. + ...++.|+++..+|.++-... . +-+.+.+.+++|++.
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aRG~v---------V---De~AL~~AL~~g~i~ 252 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGRGGI---------V---NEKDLAKALDEKDIY 252 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCCccc---------c---CHHHHHHHHHcCCeE
Confidence 1 2 688889999999887753220 0 124556667777765
No 323
>PLN02253 xanthoxin dehydrogenase
Probab=94.54 E-value=0.15 Score=47.51 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
.|.+++|+||+|++|.+.++.... .|++|+++++++++.+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~-~G~~v~~~~~~~~~~~ 56 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHK-HGAKVCIVDLQDDLGQ 56 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHH
Confidence 478999999999999987776655 4999998887665543
No 324
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.54 E-value=0.16 Score=46.60 Aligned_cols=40 Identities=13% Similarity=0.176 Sum_probs=32.6
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEF 273 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~ 273 (392)
+++|||+||+|++|...+..... .|+++++++++..+.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~-~g~~vi~~~r~~~~~~~ 41 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAE-EGYRVAVADINSEKAAN 41 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHH
Confidence 56899999999999998877766 59999999887665543
No 325
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.53 E-value=0.17 Score=47.21 Aligned_cols=74 Identities=28% Similarity=0.299 Sum_probs=44.4
Q ss_pred CCCCeEEEEcCC--CcHHHHHHHHHHHhcCCeEEEEeCCc---ccHHHH-HhcCCcEEE--eCCCC-cccc-------CC
Q 016265 231 SAGKSILVLNGS--GGVGSLVIQLAKQVFGASRVAATSST---RNLEFL-KSLGADLAI--DYTKD-NFED-------LP 294 (392)
Q Consensus 231 ~~g~~VlI~Ga~--G~vG~~aiqlak~~~G~~vv~~~~~~---~~~~~~-~~~G~~~vi--~~~~~-~~~~-------~~ 294 (392)
-.|+++||+||+ +++|.+.++.... .|++++++.+++ ++++.+ +++|....+ |..+. ...+ .-
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~-~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRA-AGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHH-CCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 357899999986 7999997766655 499988776553 233333 344532223 22221 1111 12
Q ss_pred CCccEEEecCc
Q 016265 295 EKFDVVYDAIG 305 (392)
Q Consensus 295 ~~~D~vid~~G 305 (392)
+.+|++|++.|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 46899998865
No 326
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.14 Score=46.17 Aligned_cols=70 Identities=21% Similarity=0.313 Sum_probs=45.7
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcEE-EeCCCCc-cc----cCCCCccEEEecCc
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADLA-IDYTKDN-FE----DLPEKFDVVYDAIG 305 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~v-i~~~~~~-~~----~~~~~~D~vid~~G 305 (392)
+++|+||+|++|...++.... .|++++++.++.++++.+ ++++...+ .|..+.. +. +..+.+|++|++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRN-DGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 589999999999998887766 499999998887776554 34443322 2333221 11 12235788887743
No 327
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.52 E-value=0.18 Score=46.17 Aligned_cols=73 Identities=25% Similarity=0.374 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~~-~~~-------~~~~ 296 (392)
.+.++||+||+|++|...++.... .|++++++.+++++++.+ +..+... .+ |..+.+ +.+ ...+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~-~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAE-YGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 477999999999999998877766 499999988877665433 2223221 22 222211 111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|+++.+.|
T Consensus 87 id~vi~~ag 95 (254)
T PRK08085 87 IDVLINNAG 95 (254)
T ss_pred CCEEEECCC
Confidence 899999876
No 328
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.52 E-value=0.34 Score=43.86 Aligned_cols=97 Identities=24% Similarity=0.232 Sum_probs=62.2
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHHh----cCCcE--EEeCCCCccccCCCCcc
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLKS----LGADL--AIDYTKDNFEDLPEKFD 298 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~~----~G~~~--vi~~~~~~~~~~~~~~D 298 (392)
....+++|++||=+| .|.|..+..+++... +.+++.++.+++..+.+++ .+.+. ++..+...+....+.+|
T Consensus 39 ~~l~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 116 (231)
T TIGR02752 39 KRMNVQAGTSALDVC--CGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMELPFDDNSFD 116 (231)
T ss_pred HhcCCCCCCEEEEeC--CCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcCCCCCCCcc
Confidence 456778899999987 345777788887631 3588899988887766643 23222 22222212111235799
Q ss_pred EEEecCc---------cHHHHHHhcccCCeEEEEc
Q 016265 299 VVYDAIG---------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 299 ~vid~~G---------~~~~~~~~l~~~G~iv~~g 324 (392)
+|+-+.. .+..+.+.|++||+++...
T Consensus 117 ~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 151 (231)
T TIGR02752 117 YVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLE 151 (231)
T ss_pred EEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEE
Confidence 9985432 1467888999999998764
No 329
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.50 E-value=0.29 Score=43.26 Aligned_cols=92 Identities=17% Similarity=0.145 Sum_probs=57.0
Q ss_pred cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCcEEEeCCCCccccCCCCccEEEec
Q 016265 228 TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGADLAIDYTKDNFEDLPEKFDVVYDA 303 (392)
Q Consensus 228 ~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~~vi~~~~~~~~~~~~~~D~vid~ 303 (392)
....++.+||-.| .|.|..+..+++. |.+|++++.++.-++.+++ .|........+.........+|+|+..
T Consensus 26 ~~~~~~~~vLDiG--cG~G~~a~~la~~--g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~I~~~ 101 (195)
T TIGR00477 26 VKTVAPCKTLDLG--CGQGRNSLYLSLA--GYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAAALNEDYDFIFST 101 (195)
T ss_pred hccCCCCcEEEeC--CCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhccccCCCCEEEEe
Confidence 3444567888887 4668889989873 8899999998876665532 333211111110001123469999865
Q ss_pred Cc-----------cHHHHHHhcccCCeEEEE
Q 016265 304 IG-----------QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 304 ~G-----------~~~~~~~~l~~~G~iv~~ 323 (392)
.- .+..+.++|+|||.++.+
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 102 VVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred cccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 21 136778889999996555
No 330
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.46 E-value=0.32 Score=43.91 Aligned_cols=90 Identities=20% Similarity=0.189 Sum_probs=58.9
Q ss_pred CCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcEE--------------EeCCCCcccc-
Q 016265 229 GFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADLA--------------IDYTKDNFED- 292 (392)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~v--------------i~~~~~~~~~- 292 (392)
.+.++.+||+.| .|.|.-++.||. .|.+|+.++.++.-.+.+ ++.|.... ++....++.+
T Consensus 34 ~~~~~~rvL~~g--CG~G~da~~LA~--~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPL--CGKSLDMLWLAE--QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeC--CCChHhHHHHHh--CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 456778999996 567999999996 499999999998877754 33332210 0000011111
Q ss_pred ---CCCCccEEEecCc--c---------HHHHHHhcccCCeEEE
Q 016265 293 ---LPEKFDVVYDAIG--Q---------CDRAVKAIKEGGTVVA 322 (392)
Q Consensus 293 ---~~~~~D~vid~~G--~---------~~~~~~~l~~~G~iv~ 322 (392)
....||.|+|..- . +..+.++|+|||+++.
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l 153 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLL 153 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 1236899999753 1 4678889999997544
No 331
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.44 E-value=0.17 Score=46.52 Aligned_cols=73 Identities=16% Similarity=0.282 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc-c-HHHHHhcCCcE-E--EeCCCCc-ccc-------CCCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR-N-LEFLKSLGADL-A--IDYTKDN-FED-------LPEKFD 298 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~-~-~~~~~~~G~~~-v--i~~~~~~-~~~-------~~~~~D 298 (392)
.|++++|+||++++|.+.++.+.. .|++++++.++.. + .+.+++.|.+. . .|..+.. +.+ ..+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAK-AGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999998887666 5999888766432 1 23334455332 1 2332221 111 124689
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
+++++.|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9998876
No 332
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.43 E-value=0.12 Score=48.60 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=46.5
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHH-HhcC----CcEEEeCCCCccccCCCCccEEEecC
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFL-KSLG----ADLAIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~-~~~G----~~~vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
..+.+|+|+| +|++|.+++..+... |+ +++++.++.+|.+.+ ++++ ...+.... +..+....+|+||+|+
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~--~~~~~~~~aDiVInaT 200 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARFPAARATAGS--DLAAALAAADGLVHAT 200 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc--chHhhhCCCCEEEECC
Confidence 3567899998 899999998888774 87 677777887776554 3332 11222211 1222335689999996
Q ss_pred c
Q 016265 305 G 305 (392)
Q Consensus 305 G 305 (392)
.
T Consensus 201 p 201 (284)
T PRK12549 201 P 201 (284)
T ss_pred c
Confidence 3
No 333
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=94.43 E-value=0.045 Score=51.12 Aligned_cols=66 Identities=23% Similarity=0.157 Sum_probs=44.0
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G 305 (392)
|||+||+|.+|...++.+.. .|.+|++++++..+.......+ +.+.......+...++|+||.+.+
T Consensus 1 vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvh~a~ 66 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTK-DGHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEGADAVINLAG 66 (292)
T ss_pred CEEEcccchhhHHHHHHHHH-cCCEEEEEeCCCCCCCccccee---eecccccchhhhcCCCCEEEECCC
Confidence 68999999999999987766 4999999998766543322121 111111222233457999999876
No 334
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.43 E-value=0.19 Score=45.71 Aligned_cols=41 Identities=24% Similarity=0.270 Sum_probs=32.6
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
+.+++|+||+|++|...+..... .|++++++++++++.+.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~-~g~~v~~~~r~~~~~~~~ 42 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAA-KGRDLALCARRTDRLEEL 42 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHH
Confidence 56899999999999987766555 489999998887766544
No 335
>PRK08267 short chain dehydrogenase; Provisional
Probab=94.42 E-value=0.17 Score=46.49 Aligned_cols=71 Identities=25% Similarity=0.400 Sum_probs=47.8
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cC-Cc-E--EEeCCCCc-ccc----C----CCCccE
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LG-AD-L--AIDYTKDN-FED----L----PEKFDV 299 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G-~~-~--vi~~~~~~-~~~----~----~~~~D~ 299 (392)
.++||+||+|++|...++.+.. .|++|++++++.++++.+.+ ++ .. + ..|..+.. +.+ . .+++|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAA-EGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 4799999999999998887666 49999999988877665543 32 11 1 22433321 111 1 346899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 81 vi~~ag 86 (260)
T PRK08267 81 LFNNAG 86 (260)
T ss_pred EEECCC
Confidence 999887
No 336
>PRK08655 prephenate dehydrogenase; Provisional
Probab=94.41 E-value=0.2 Score=50.19 Aligned_cols=84 Identities=23% Similarity=0.391 Sum_probs=54.0
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccH-HHHHhcCCcEEEeCCCCccccCCCCccEEEecCc--c----H
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNL-EFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG--Q----C 307 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~-~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G--~----~ 307 (392)
+|+|+||.|.+|.+.+..++. .|.++++.++++++. +.+.++|+... .+..+....+|+||-|+. . +
T Consensus 2 kI~IIGG~G~mG~slA~~L~~-~G~~V~v~~r~~~~~~~~a~~~gv~~~-----~~~~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKE-KGFEVIVTGRDPKKGKEVAKELGVEYA-----NDNIDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHH-CCCEEEEEECChHHHHHHHHHcCCeec-----cCHHHHhccCCEEEEecCHHHHHHHH
Confidence 689998889999998888887 588888888877664 55667775311 112222345677777765 1 2
Q ss_pred HHHHHhcccCCeEEEEc
Q 016265 308 DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 308 ~~~~~~l~~~G~iv~~g 324 (392)
......++++..++.++
T Consensus 76 ~~l~~~l~~~~iViDvs 92 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVT 92 (437)
T ss_pred HHHHhhCCCCCEEEEcc
Confidence 33333445555555554
No 337
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=94.41 E-value=0.17 Score=48.54 Aligned_cols=104 Identities=18% Similarity=0.225 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc------c
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG------Q 306 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G------~ 306 (392)
|.+|.|+| .|.+|...++.++. +|.++++.+....+. .....+.. ...++.++-...|++.-.+. .
T Consensus 142 gkTvGIiG-~G~IG~~va~~l~a-fgm~v~~~d~~~~~~-~~~~~~~~-----~~~~Ld~lL~~sDiv~lh~PlT~eT~g 213 (324)
T COG0111 142 GKTVGIIG-LGRIGRAVAKRLKA-FGMKVIGYDPYSPRE-RAGVDGVV-----GVDSLDELLAEADILTLHLPLTPETRG 213 (324)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-CCCeEEEECCCCchh-hhccccce-----ecccHHHHHhhCCEEEEcCCCCcchhc
Confidence 78999998 99999999999998 699999999822221 11111111 01223444456788776654 1
Q ss_pred -H-HHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCcc
Q 016265 307 -C-DRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 307 -~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
+ ...+..|++|..+|.++-.. --+-+.+++.+++|++.
T Consensus 214 ~i~~~~~a~MK~gailIN~aRG~------------vVde~aL~~AL~~G~i~ 253 (324)
T COG0111 214 LINAEELAKMKPGAILINAARGG------------VVDEDALLAALDSGKIA 253 (324)
T ss_pred ccCHHHHhhCCCCeEEEECCCcc------------eecHHHHHHHHHcCCcc
Confidence 2 57788888888776654211 01235667777888776
No 338
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.41 E-value=0.19 Score=46.70 Aligned_cols=72 Identities=25% Similarity=0.287 Sum_probs=47.4
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cCCc-EEE--eCCCC-cccc-------CCCCccEE
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LGAD-LAI--DYTKD-NFED-------LPEKFDVV 300 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~-~vi--~~~~~-~~~~-------~~~~~D~v 300 (392)
+.+|+|+||+|++|...++.+.. .|.+|++++++.++++.+.+ ++.. ..+ |..+. .+.+ ...++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALE-RGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999998877666 49999988888777655543 2321 122 22221 1111 12468999
Q ss_pred EecCc
Q 016265 301 YDAIG 305 (392)
Q Consensus 301 id~~G 305 (392)
|.+.|
T Consensus 82 i~~ag 86 (275)
T PRK08263 82 VNNAG 86 (275)
T ss_pred EECCC
Confidence 99987
No 339
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.40 E-value=0.19 Score=45.99 Aligned_cols=73 Identities=26% Similarity=0.386 Sum_probs=47.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCc-EEE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGAD-LAI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~-~vi--~~~~~~-~~~-------~~~~ 296 (392)
.+.+++|+||+|++|...+..+.. .|++++++.+++++.+.+ ++.+.. ..+ |..+.. ..+ ...+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAR-EGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999998776656 499999998877664433 333432 122 222211 111 1236
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 85 id~li~~ag 93 (253)
T PRK06172 85 LDYAFNNAG 93 (253)
T ss_pred CCEEEECCC
Confidence 799998876
No 340
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.40 E-value=0.39 Score=46.12 Aligned_cols=95 Identities=12% Similarity=0.159 Sum_probs=59.8
Q ss_pred cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEE-EEeCCcccHHHH-Hh----cCCcEEEeCCCCccccCCCCccEEE
Q 016265 228 TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRV-AATSSTRNLEFL-KS----LGADLAIDYTKDNFEDLPEKFDVVY 301 (392)
Q Consensus 228 ~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv-~~~~~~~~~~~~-~~----~G~~~vi~~~~~~~~~~~~~~D~vi 301 (392)
...+...+++|+| +|+.|...+.......+.+.+ +..++++|.+.+ ++ ++.... .+ .+.++.....|+|+
T Consensus 122 la~~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~~~~aDiVi 197 (325)
T PRK08618 122 LAREDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VV--NSADEAIEEADIIV 197 (325)
T ss_pred hcCCCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-Ee--CCHHHHHhcCCEEE
Confidence 3334567899998 999998776554333476544 556677775543 32 343321 12 22333346789999
Q ss_pred ecCcc--HHHHHHhcccCCeEEEEcCCC
Q 016265 302 DAIGQ--CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 302 d~~G~--~~~~~~~l~~~G~iv~~g~~~ 327 (392)
.|+++ .... +++++|-.+..+|...
T Consensus 198 ~aT~s~~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 198 TVTNAKTPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred EccCCCCcchH-HhcCCCcEEEecCCCC
Confidence 99874 2233 8889988888887653
No 341
>PRK09242 tropinone reductase; Provisional
Probab=94.39 E-value=0.2 Score=46.01 Aligned_cols=42 Identities=19% Similarity=0.292 Sum_probs=34.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.|.+++|+||+|++|...+..+.. .|++++++.++.++.+.+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~-~G~~v~~~~r~~~~~~~~ 49 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLG-LGADVLIVARDADALAQA 49 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHH
Confidence 478999999999999998887766 499999998877665544
No 342
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.39 E-value=0.47 Score=43.16 Aligned_cols=93 Identities=18% Similarity=0.365 Sum_probs=55.7
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC-cccH----HHHHhcCCc-EEE--eCCCCc-cc----c---CCCC
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS-TRNL----EFLKSLGAD-LAI--DYTKDN-FE----D---LPEK 296 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~-~~~~----~~~~~~G~~-~vi--~~~~~~-~~----~---~~~~ 296 (392)
+.++||+||+|++|...+.-... .|+++++..++ .++. ..+++.|.. ..+ |..+.. .. + ...+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAK-EGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 67999999999999987775555 49988776643 2222 222334432 122 322211 11 1 1246
Q ss_pred ccEEEecCcc----------------------------HHHHHHhcccCCeEEEEcCC
Q 016265 297 FDVVYDAIGQ----------------------------CDRAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 297 ~D~vid~~G~----------------------------~~~~~~~l~~~G~iv~~g~~ 326 (392)
+|++|.+.|. .+.+.+.++..|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 8999998761 12345556678899888653
No 343
>PRK06953 short chain dehydrogenase; Provisional
Probab=94.38 E-value=0.17 Score=45.32 Aligned_cols=71 Identities=27% Similarity=0.430 Sum_probs=48.0
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCc-EEEeCCCC-cccc----C-CCCccEEEecCc
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGAD-LAIDYTKD-NFED----L-PEKFDVVYDAIG 305 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~-~vi~~~~~-~~~~----~-~~~~D~vid~~G 305 (392)
.+++|+|++|++|...++.+.. .|+++++++++.++.+.++..+.. ...|..+. .+.. . ..++|++|.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRA-DGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHh-CCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence 4799999999999988876655 499999998887777766665543 22233222 1111 1 235899998765
No 344
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.37 E-value=0.18 Score=47.43 Aligned_cols=73 Identities=22% Similarity=0.252 Sum_probs=44.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHH-hc----CCcEEEeCCCCccccCCCCccEEEecC
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLK-SL----GADLAIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~-~~----G~~~vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
..+.+|+|+| +||.+.+++..+... |+ +++++.++.+|.+.+. ++ +...+......+..+....+|+|++|+
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT 202 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence 3478999998 899999988776664 77 5567778777765543 33 221111111011122234689999997
Q ss_pred c
Q 016265 305 G 305 (392)
Q Consensus 305 G 305 (392)
.
T Consensus 203 p 203 (283)
T PRK14027 203 P 203 (283)
T ss_pred C
Confidence 5
No 345
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.36 E-value=0.19 Score=47.10 Aligned_cols=95 Identities=22% Similarity=0.249 Sum_probs=65.2
Q ss_pred ccchhHHHHHHHHHhcCCC-CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGFS-AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
.+||.....+.-|+..++. .|.+|+|.|.+.-+|.-.+.++.. .|+.|.++......+ .
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~-~gAtVtv~hs~t~~l-------------------~ 195 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLN-AGASVSVCHILTKDL-------------------S 195 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHH-CCCEEEEEeCCcHHH-------------------H
Confidence 3466665566666665553 699999999777999999999887 599887764322222 2
Q ss_pred cCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCCC
Q 016265 292 DLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~~ 327 (392)
+..+.+|+|+-++|... .--+.+++|..++.+|...
T Consensus 196 ~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 196 FYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINR 232 (285)
T ss_pred HHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeeccc
Confidence 22346799999998321 1134679999999888643
No 346
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.35 E-value=0.81 Score=40.86 Aligned_cols=97 Identities=20% Similarity=0.112 Sum_probs=61.1
Q ss_pred HHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE--EEeCCCCccccCCCCcc
Q 016265 225 LERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL--AIDYTKDNFEDLPEKFD 298 (392)
Q Consensus 225 l~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~--vi~~~~~~~~~~~~~~D 298 (392)
+...+++++++||-+| +| .|..+..+++. +.+++.++.+++..+.++ ++|.+. ++..+........+.||
T Consensus 71 ~~~l~~~~~~~VLeiG-~G-sG~~t~~la~~--~~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 146 (212)
T PRK00312 71 TELLELKPGDRVLEIG-TG-SGYQAAVLAHL--VRRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFD 146 (212)
T ss_pred HHhcCCCCCCEEEEEC-CC-ccHHHHHHHHH--hCEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcC
Confidence 4566788999999997 44 46667777765 347888888877665554 345432 12211111101124699
Q ss_pred EEEecCc---cHHHHHHhcccCCeEEEEcC
Q 016265 299 VVYDAIG---QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 299 ~vid~~G---~~~~~~~~l~~~G~iv~~g~ 325 (392)
+|+.... -.....+.|++||+++..-.
T Consensus 147 ~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 147 RILVTAAAPEIPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred EEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence 9886533 24678899999999876544
No 347
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.33 E-value=0.19 Score=46.67 Aligned_cols=71 Identities=23% Similarity=0.286 Sum_probs=47.0
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cCCc-EE--EeCCCCc-ccc-------CCCCccEEE
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LGAD-LA--IDYTKDN-FED-------LPEKFDVVY 301 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~-~v--i~~~~~~-~~~-------~~~~~D~vi 301 (392)
.++||+||+|++|...++.+.. .|.+++++.++.++++.+++ .+.. .+ .|..+.. +.+ ...++|++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5799999999999998776666 49999999988877666543 2322 11 2322221 111 124689999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
.+.|
T Consensus 82 ~~ag 85 (276)
T PRK06482 82 SNAG 85 (276)
T ss_pred ECCC
Confidence 9876
No 348
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.33 E-value=0.14 Score=47.61 Aligned_cols=40 Identities=23% Similarity=0.294 Sum_probs=33.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
++.++||+|++|++|...++.+.. .|++|+++.++.++.+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~-~G~~V~~~~r~~~~~~ 45 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVA-AGAAVMIVGRNPDKLA 45 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeCCHHHHH
Confidence 468999999999999999988777 4999998888766544
No 349
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.19 Score=45.75 Aligned_cols=73 Identities=25% Similarity=0.357 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hc--CCc-EEE--eCCCCc-ccc-------CCCCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SL--GAD-LAI--DYTKDN-FED-------LPEKF 297 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~--G~~-~vi--~~~~~~-~~~-------~~~~~ 297 (392)
.|.+++|+||+|++|...++.... .|++++++.++.++.+... .+ +.. ..+ |..+.. ..+ ...++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAR-EGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHH-CCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467999999999999988876655 4999988888766544332 22 322 222 222211 111 12478
Q ss_pred cEEEecCc
Q 016265 298 DVVYDAIG 305 (392)
Q Consensus 298 D~vid~~G 305 (392)
|++|.+.|
T Consensus 83 d~vi~~ag 90 (252)
T PRK06138 83 DVLVNNAG 90 (252)
T ss_pred CEEEECCC
Confidence 99999877
No 350
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.30 E-value=0.096 Score=44.01 Aligned_cols=85 Identities=25% Similarity=0.327 Sum_probs=53.8
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCC-------cc--ccCCCCccEEEecCc-
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKD-------NF--EDLPEKFDVVYDAIG- 305 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~-------~~--~~~~~~~D~vid~~G- 305 (392)
|+|+| +|++|...+..++. .|.+|.++.+.+ +.+.+++.|.....+..+. .. ....+.+|++|-|+-
T Consensus 1 I~I~G-~GaiG~~~a~~L~~-~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQ-AGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHH-TTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEEC-cCHHHHHHHHHHHH-CCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence 68998 99999887777766 499999999888 7787777664322111000 00 112457999999985
Q ss_pred -cHHHHHH----hcccCCeEEEE
Q 016265 306 -QCDRAVK----AIKEGGTVVAL 323 (392)
Q Consensus 306 -~~~~~~~----~l~~~G~iv~~ 323 (392)
..+.+++ .+.++..++.+
T Consensus 78 ~~~~~~l~~l~~~~~~~t~iv~~ 100 (151)
T PF02558_consen 78 YQLEQALQSLKPYLDPNTTIVSL 100 (151)
T ss_dssp GGHHHHHHHHCTGEETTEEEEEE
T ss_pred cchHHHHHHHhhccCCCcEEEEE
Confidence 3444444 44455566655
No 351
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.29 E-value=0.21 Score=45.49 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=33.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
++.++||+||+|++|...+..+.. .|+++++++++.++.+.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~ 43 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAE-EGAKVAVFDLNREAAEKV 43 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEecCCHHHHHHH
Confidence 468899999999999998887766 599998888877665443
No 352
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.14 Score=46.93 Aligned_cols=73 Identities=26% Similarity=0.374 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHH----HHHhcCCcE---EEeCCCCc-cccC-------CC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLE----FLKSLGADL---AIDYTKDN-FEDL-------PE 295 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~----~~~~~G~~~---vi~~~~~~-~~~~-------~~ 295 (392)
.+.+++|+||+|++|...++.+.. .|++ ++++.+++++.. .+++.+... .+|..+.+ +.+. .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~-~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAE-RGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHH-CCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 578899999999999998887776 4998 777777665544 223344332 22333221 1111 13
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
++|++|.+.|
T Consensus 84 ~id~li~~ag 93 (260)
T PRK06198 84 RLDALVNAAG 93 (260)
T ss_pred CCCEEEECCC
Confidence 6899999976
No 353
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=94.25 E-value=0.42 Score=41.85 Aligned_cols=90 Identities=23% Similarity=0.244 Sum_probs=53.3
Q ss_pred cCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHHhcCCcEE-EeCCCCcc-c----cC-CCCccE
Q 016265 228 TGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLKSLGADLA-IDYTKDNF-E----DL-PEKFDV 299 (392)
Q Consensus 228 ~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~~~G~~~v-i~~~~~~~-~----~~-~~~~D~ 299 (392)
..+++|++||.+| +|+-+.. ..+++... ..+++.++.++.+ +..+...+ .|..+... . .. .+++|+
T Consensus 28 ~~i~~g~~VLDiG-~GtG~~~-~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~ 101 (188)
T TIGR00438 28 KLIKPGDTVLDLG-AAPGGWS-QVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV 101 (188)
T ss_pred cccCCCCEEEEec-CCCCHHH-HHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence 4578999999998 6665554 44444422 3468888887754 11233322 13322211 0 11 346999
Q ss_pred EEe-c----Cc---------------cHHHHHHhcccCCeEEEE
Q 016265 300 VYD-A----IG---------------QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 300 vid-~----~G---------------~~~~~~~~l~~~G~iv~~ 323 (392)
|+. . .| .+..+.++|++||+++..
T Consensus 102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~ 145 (188)
T TIGR00438 102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVK 145 (188)
T ss_pred EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 995 2 22 135678899999998864
No 354
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.16 E-value=0.38 Score=43.95 Aligned_cols=39 Identities=23% Similarity=0.238 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEE-eCCcccH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAA-TSSTRNL 271 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~-~~~~~~~ 271 (392)
.+.+++|+||+|++|...++.+.. .|+++++. .++.++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~-~G~~v~i~~~r~~~~~ 44 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLAN-DGALVAIHYGRNKQAA 44 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHH
Confidence 367899999999999998887666 49988775 4555544
No 355
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.16 E-value=0.24 Score=45.44 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.|.+|||+||+|++|...++.... .|++++++.++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~-~G~~v~~~~~~ 48 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAK-AGADIIITTHG 48 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCC
Confidence 578999999999999998887766 59999988876
No 356
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.15 E-value=0.19 Score=45.95 Aligned_cols=38 Identities=24% Similarity=0.404 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN 270 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~ 270 (392)
.|++++|+||+|++|...++.+.. .|+++++++++.++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~-~g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLA-AGATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCChhh
Confidence 478999999999999998877766 49999988886554
No 357
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.15 E-value=0.47 Score=44.62 Aligned_cols=83 Identities=25% Similarity=0.239 Sum_probs=53.5
Q ss_pred HHHhcC-CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEe
Q 016265 224 GLERTG-FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYD 302 (392)
Q Consensus 224 al~~~~-~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid 302 (392)
.|+..+ .-.|.+|+|+|.+|-+|...++++.. .|+.|.++.+....+ .+ ..+++|++|.
T Consensus 149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~-~gatVtv~~~~t~~L--~~-----------------~~~~aDIvI~ 208 (283)
T PRK14192 149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLN-ANATVTICHSRTQNL--PE-----------------LVKQADIIVG 208 (283)
T ss_pred HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHh-CCCEEEEEeCCchhH--HH-----------------HhccCCEEEE
Confidence 444444 35789999999444499999998887 499666665522211 11 1246799999
Q ss_pred cCccHH-HHHHhcccCCeEEEEcCC
Q 016265 303 AIGQCD-RAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 303 ~~G~~~-~~~~~l~~~G~iv~~g~~ 326 (392)
++|... --.+.++++-.++.++..
T Consensus 209 AtG~~~~v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 209 AVGKPELIKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred ccCCCCcCCHHHcCCCCEEEEEEEe
Confidence 998321 112458888888887643
No 358
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=94.13 E-value=0.21 Score=47.75 Aligned_cols=86 Identities=20% Similarity=0.256 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc-c---
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG-Q--- 306 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G-~--- 306 (392)
..|++|.|+| .|.||+..++-++. +|..+....+...+.+...++++. ..++.+.....|+++-|.. .
T Consensus 160 ~~gK~vgilG-~G~IG~~ia~rL~~-Fg~~i~y~~r~~~~~~~~~~~~~~------~~d~~~~~~~sD~ivv~~pLt~~T 231 (336)
T KOG0069|consen 160 LEGKTVGILG-LGRIGKAIAKRLKP-FGCVILYHSRTQLPPEEAYEYYAE------FVDIEELLANSDVIVVNCPLTKET 231 (336)
T ss_pred ccCCEEEEec-CcHHHHHHHHhhhh-ccceeeeecccCCchhhHHHhccc------ccCHHHHHhhCCEEEEecCCCHHH
Confidence 4689999998 99999999999998 795555666777778888777765 2345556667888887654 1
Q ss_pred --H--HHHHHhcccCCeEEEEc
Q 016265 307 --C--DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 307 --~--~~~~~~l~~~G~iv~~g 324 (392)
+ ...+..|++++.+|..+
T Consensus 232 ~~liNk~~~~~mk~g~vlVN~a 253 (336)
T KOG0069|consen 232 RHLINKKFIEKMKDGAVLVNTA 253 (336)
T ss_pred HHHhhHHHHHhcCCCeEEEecc
Confidence 2 57888999999998764
No 359
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.13 E-value=0.48 Score=40.42 Aligned_cols=86 Identities=16% Similarity=0.101 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc--HHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ--CDR 309 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~--~~~ 309 (392)
.|.+|+|.| +|.+|.--++.... .|+++.++. ++..+.+++++.-. ++.+.-. .....++|+||-+++. .+.
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~-~ga~V~VIs--p~~~~~l~~l~~i~-~~~~~~~-~~dl~~a~lViaaT~d~e~N~ 85 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKD-TGAFVTVVS--PEICKEMKELPYIT-WKQKTFS-NDDIKDAHLIYAATNQHAVNM 85 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEc--CccCHHHHhccCcE-EEecccC-hhcCCCceEEEECCCCHHHHH
Confidence 578999998 99999987776655 599888773 34444444554211 2211111 1123578999999984 444
Q ss_pred HHHhcccCCeEEEE
Q 016265 310 AVKAIKEGGTVVAL 323 (392)
Q Consensus 310 ~~~~l~~~G~iv~~ 323 (392)
.+...+..+.++..
T Consensus 86 ~i~~~a~~~~~vn~ 99 (157)
T PRK06719 86 MVKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHHCCcEEE
Confidence 44444433334443
No 360
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.12 E-value=0.33 Score=45.47 Aligned_cols=95 Identities=25% Similarity=0.278 Sum_probs=65.5
Q ss_pred ccchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
..||.....+..|+..++ -.|.+|+|+|.+.-+|.-.+.++.. .|+.|.++..... +..
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~-~~atVt~~hs~t~-------------------~l~ 196 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQ-AGATVTICHSKTR-------------------DLA 196 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHH-CCCEEEEecCCCC-------------------CHH
Confidence 346665555556666554 3699999999777889999999887 5998887543222 223
Q ss_pred cCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCCC
Q 016265 292 DLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~~ 327 (392)
+..+..|+|+-++|... ---+.+++|..++.+|...
T Consensus 197 ~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 197 AHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNR 233 (285)
T ss_pred HHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccc
Confidence 33456799999998321 1126799999999988644
No 361
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.07 E-value=0.27 Score=45.02 Aligned_cols=73 Identities=21% Similarity=0.273 Sum_probs=45.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC-cccHHHHHhcCCcE-EEeCCCCc-ccc-------CCCCccEEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS-TRNLEFLKSLGADL-AIDYTKDN-FED-------LPEKFDVVY 301 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~-~~~~~~~~~~G~~~-vi~~~~~~-~~~-------~~~~~D~vi 301 (392)
.|.+++|+||+|++|...++.... .|++++++.+. ++..+.+++.+... ..|..+.. ..+ ..+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~-~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLR-EGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999998877666 49988877653 33444444434321 12332221 111 124689999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
.+.|
T Consensus 85 ~~ag 88 (255)
T PRK06463 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 8876
No 362
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.25 Score=46.96 Aligned_cols=35 Identities=26% Similarity=0.248 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.|.+++|+||++++|.+.++.... .|++|+++.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~-~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGA-AGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEecc
Confidence 478999999999999998887766 59999988875
No 363
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.01 E-value=0.13 Score=47.62 Aligned_cols=70 Identities=21% Similarity=0.334 Sum_probs=45.3
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcE-EEeCCCCc-ccc-------CCCCccEEEec
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADL-AIDYTKDN-FED-------LPEKFDVVYDA 303 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~-vi~~~~~~-~~~-------~~~~~D~vid~ 303 (392)
+.+++|+||+|++|...++.+.. .|++|++++++.++.+.. .+... ..|..+.. +.+ ..+.+|++|.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~-~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLAR-AGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHH-CCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 56899999999999988877666 499999888876554322 12221 22332221 111 12468999999
Q ss_pred Cc
Q 016265 304 IG 305 (392)
Q Consensus 304 ~G 305 (392)
.|
T Consensus 81 ag 82 (270)
T PRK06179 81 AG 82 (270)
T ss_pred CC
Confidence 87
No 364
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.00 E-value=0.25 Score=42.26 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=54.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc-ccHHHHHhcCCcEEEeCCCCccccC-----------CCCcc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST-RNLEFLKSLGADLAIDYTKDNFEDL-----------PEKFD 298 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~-~~~~~~~~~G~~~vi~~~~~~~~~~-----------~~~~D 298 (392)
.+|-.-||+||++++|.+++..... .|+.+++.+-.. .-.+.++++|-..++...+..-++. -+..|
T Consensus 7 ~kglvalvtggasglg~ataerlak-qgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAK-QGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHh-cCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 4566779999999999998876555 499999998644 4467889999887776544322211 23579
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
+.++|.|
T Consensus 86 ~~vncag 92 (260)
T KOG1199|consen 86 ALVNCAG 92 (260)
T ss_pred eeeeccc
Confidence 9999988
No 365
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=93.98 E-value=0.26 Score=45.15 Aligned_cols=73 Identities=21% Similarity=0.342 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCc-EEE--eCCCC-cccc-------CCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGAD-LAI--DYTKD-NFED-------LPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~-~vi--~~~~~-~~~~-------~~~~~D~ 299 (392)
.+.+++|+||+|++|...+..+.. .|++|++++++.++.+.+. +++.. ..+ |..+. ...+ ..+.+|+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLA-EGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367899999999999998887766 4999999988877665543 33322 112 22221 1111 1246899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 84 li~~ag 89 (257)
T PRK07067 84 LFNNAA 89 (257)
T ss_pred EEECCC
Confidence 998865
No 366
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=93.98 E-value=0.71 Score=41.15 Aligned_cols=97 Identities=26% Similarity=0.290 Sum_probs=61.8
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcC--CeEEEEeCCcccHHHHHhcCC----cEEEeCCCCccccCCCCccE
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFG--ASRVAATSSTRNLEFLKSLGA----DLAIDYTKDNFEDLPEKFDV 299 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G--~~vv~~~~~~~~~~~~~~~G~----~~vi~~~~~~~~~~~~~~D~ 299 (392)
......++.+|+-+| +|. |..+..+++.. + .+++.++.++...+.+++... -.++..+-.......+.+|+
T Consensus 33 ~~~~~~~~~~vldiG-~G~-G~~~~~~~~~~-~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 109 (223)
T TIGR01934 33 KLIGVFKGQKVLDVA-CGT-GDLAIELAKSA-PDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQADAEALPFEDNSFDA 109 (223)
T ss_pred HHhccCCCCeEEEeC-CCC-ChhHHHHHHhc-CCCceEEEEECCHHHHHHHHHHhccCCCceEEecchhcCCCCCCcEEE
Confidence 344455888999997 554 77888888873 5 478888888887777765321 11221111111111346999
Q ss_pred EEecCc---------cHHHHHHhcccCCeEEEEcC
Q 016265 300 VYDAIG---------QCDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 300 vid~~G---------~~~~~~~~l~~~G~iv~~g~ 325 (392)
++...+ .++.+.+.|++||+++.+..
T Consensus 110 i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 144 (223)
T TIGR01934 110 VTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEF 144 (223)
T ss_pred EEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEe
Confidence 876432 14778889999999987654
No 367
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=93.96 E-value=0.26 Score=44.97 Aligned_cols=70 Identities=26% Similarity=0.358 Sum_probs=47.1
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCcE-EE--eCCCC-cccc-------CCCCccEEEe
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGADL-AI--DYTKD-NFED-------LPEKFDVVYD 302 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~~-vi--~~~~~-~~~~-------~~~~~D~vid 302 (392)
+|+|+||+|++|...+..+.. .|++|+++++++++++.+. .++... .+ |..+. .+.+ ..+++|++|.
T Consensus 2 ~vlItGasg~iG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQ-QGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred EEEEECCCchHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 689999999999998888776 5999999998877766554 344322 12 32221 1111 1246899998
Q ss_pred cCc
Q 016265 303 AIG 305 (392)
Q Consensus 303 ~~G 305 (392)
+.|
T Consensus 81 ~ag 83 (248)
T PRK10538 81 NAG 83 (248)
T ss_pred CCC
Confidence 865
No 368
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.90 E-value=0.32 Score=46.41 Aligned_cols=43 Identities=26% Similarity=0.191 Sum_probs=35.3
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
-.|.+++|+|+.+|+|..++.-... .|++||+..++.++.+.+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~-~Ga~Vv~~~R~~~~~~~~ 75 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELAL-RGAHVVLACRNEERGEEA 75 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHh-CCCEEEEEeCCHHHHHHH
Confidence 3568999999999999998876656 499999999988765554
No 369
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=93.89 E-value=0.3 Score=48.55 Aligned_cols=74 Identities=15% Similarity=0.269 Sum_probs=49.6
Q ss_pred CCCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHH-HhcCCcEEEeCCCCccccCCCCccEEEecCcc
Q 016265 229 GFSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFL-KSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ 306 (392)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~-~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~ 306 (392)
.--.|.+|+|+| +|++|.+++..+.. .|+ +++++.++.+|.+.+ .+++...++.++ +..+....+|+||.|+++
T Consensus 177 ~~l~~kkvlviG-aG~~a~~va~~L~~-~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~--~l~~~l~~aDiVI~aT~a 252 (414)
T PRK13940 177 DNISSKNVLIIG-AGQTGELLFRHVTA-LAPKQIMLANRTIEKAQKITSAFRNASAHYLS--ELPQLIKKADIIIAAVNV 252 (414)
T ss_pred cCccCCEEEEEc-CcHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHHHhcCCeEecHH--HHHHHhccCCEEEECcCC
Confidence 334678999998 89999998888877 486 466667777775444 456522233321 223334578999999984
No 370
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.89 E-value=0.79 Score=38.25 Aligned_cols=93 Identities=26% Similarity=0.267 Sum_probs=63.5
Q ss_pred cchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcccc
Q 016265 214 LPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFED 292 (392)
Q Consensus 214 l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~ 292 (392)
+|+........++..++ -.|.+|+|+|.+..+|.-.+.++.. .|+.+.++......++ +
T Consensus 8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~-~gatV~~~~~~t~~l~-------------------~ 67 (140)
T cd05212 8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQR-DGATVYSCDWKTIQLQ-------------------S 67 (140)
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHH-CCCEEEEeCCCCcCHH-------------------H
Confidence 45554444555555544 4699999999999999998888887 5998888865432222 2
Q ss_pred CCCCccEEEecCccHH-HHHHhcccCCeEEEEcCC
Q 016265 293 LPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 293 ~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~ 326 (392)
..+..|+|+-++|... ---+.+++|-.++.+|..
T Consensus 68 ~v~~ADIVvsAtg~~~~i~~~~ikpGa~Vidvg~~ 102 (140)
T cd05212 68 KVHDADVVVVGSPKPEKVPTEWIKPGATVINCSPT 102 (140)
T ss_pred HHhhCCEEEEecCCCCccCHHHcCCCCEEEEcCCC
Confidence 2346799999988431 223468998888877643
No 371
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=93.89 E-value=0.28 Score=44.98 Aligned_cols=73 Identities=22% Similarity=0.358 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-E--EeCCCCc-cc-------cCCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-A--IDYTKDN-FE-------DLPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-v--i~~~~~~-~~-------~~~~~ 296 (392)
.+.+|+|+||+|++|...+..... .|+++++++++.++.+.+ ++.|.+. + .|..+.. .. +...+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~-~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFAT-AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999998877666 499999888776655433 2334322 2 2333221 11 11246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 89 ~d~li~~ag 97 (255)
T PRK06113 89 VDILVNNAG 97 (255)
T ss_pred CCEEEECCC
Confidence 899999876
No 372
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=93.87 E-value=0.84 Score=40.75 Aligned_cols=90 Identities=21% Similarity=0.239 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc-cHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc--H-
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR-NLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ--C- 307 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~-~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~--~- 307 (392)
.|.+|||.| +|.+|..-+..+.. .|++|++++.... .++.+.+.|- ..+...+.. .....++|+||-++|. +
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~-~ga~VtVvsp~~~~~l~~l~~~~~-i~~~~~~~~-~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLK-AGAQLRVIAEELESELTLLAEQGG-ITWLARCFD-ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHH-CCCEEEEEcCCCCHHHHHHHHcCC-EEEEeCCCC-HHHhCCcEEEEECCCCHHHH
Confidence 478999998 99999998888877 5998888876432 3334444442 112111111 1223589999999984 3
Q ss_pred HHHHHhcccCCeEEEEcC
Q 016265 308 DRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 308 ~~~~~~l~~~G~iv~~g~ 325 (392)
.......+..|..|....
T Consensus 84 ~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVD 101 (205)
T ss_pred HHHHHHHHHcCCEEEECC
Confidence 345555556777775543
No 373
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=93.84 E-value=0.29 Score=44.88 Aligned_cols=73 Identities=19% Similarity=0.257 Sum_probs=45.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc--cHHHHHhcCCcE-EE--eCCCC-cccc-------CCCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR--NLEFLKSLGADL-AI--DYTKD-NFED-------LPEKFD 298 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~--~~~~~~~~G~~~-vi--~~~~~-~~~~-------~~~~~D 298 (392)
.|.+++|+|++|++|.+.++.... .|++|++++.... ..+.+++.+... .+ |..+. ...+ ..+++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAE-AGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 478999999999999998887766 4999887765432 223334444321 22 22211 1111 124689
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
++|++.|
T Consensus 88 ~li~~Ag 94 (253)
T PRK08993 88 ILVNNAG 94 (253)
T ss_pred EEEECCC
Confidence 9999876
No 374
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=93.83 E-value=0.77 Score=39.60 Aligned_cols=94 Identities=24% Similarity=0.256 Sum_probs=57.2
Q ss_pred ccchhHHHHHHHHHhc-CCCCCCeEEEEcCCCc-HHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCcc
Q 016265 213 GLPLAIETAYEGLERT-GFSAGKSILVLNGSGG-VGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNF 290 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~-~~~~g~~VlI~Ga~G~-vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~ 290 (392)
..|+....+...++.. .--.|.+|+|+| +|. +|..++..++. .|++++++.+..+++
T Consensus 23 ~~p~~~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~-~g~~V~v~~r~~~~l------------------- 81 (168)
T cd01080 23 FIPCTPAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLN-RNATVTVCHSKTKNL------------------- 81 (168)
T ss_pred ccCChHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhh-CCCEEEEEECCchhH-------------------
Confidence 3455444444444433 345789999999 565 69988888877 599877777653222
Q ss_pred ccCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCCC
Q 016265 291 EDLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 291 ~~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~~ 327 (392)
.+....+|+||.++|..+ --.+.++++-.++.++.+.
T Consensus 82 ~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~pr 119 (168)
T cd01080 82 KEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred HHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCC
Confidence 222346789999988421 1112356666666676544
No 375
>PRK08226 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.29 Score=45.05 Aligned_cols=38 Identities=21% Similarity=0.331 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN 270 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~ 270 (392)
.+.+++|+||+|++|...+..+.. .|++|+++.++++.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~-~G~~Vv~~~r~~~~ 42 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFAR-HGANLILLDISPEI 42 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEecCCHHH
Confidence 468999999999999998887766 59998888876643
No 376
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.83 E-value=0.35 Score=41.37 Aligned_cols=85 Identities=20% Similarity=0.289 Sum_probs=53.7
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc---HHH-
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ---CDR- 309 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~---~~~- 309 (392)
.+|.++| .|-+|...+.-+.. .|.++.+.++++++.+.+.+.|+..+ + +..+..+..|+||-|+.. .+.
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~-~g~~v~~~d~~~~~~~~~~~~g~~~~-~----s~~e~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAK-AGYEVTVYDRSPEKAEALAEAGAEVA-D----SPAEAAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHH-TTTEEEEEESSHHHHHHHHHTTEEEE-S----SHHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEc-hHHHHHHHHHHHHh-cCCeEEeeccchhhhhhhHHhhhhhh-h----hhhhHhhcccceEeecccchhhhhh
Confidence 3688998 99999887776665 49999999999999988888774322 1 223333456888888763 222
Q ss_pred -----HHHhcccCCeEEEEcC
Q 016265 310 -----AVKAIKEGGTVVALTG 325 (392)
Q Consensus 310 -----~~~~l~~~G~iv~~g~ 325 (392)
.+..+.+|..++.++.
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS
T ss_pred hhhhHHhhccccceEEEecCC
Confidence 3444555556665543
No 377
>PRK12743 oxidoreductase; Provisional
Probab=93.82 E-value=0.32 Score=44.60 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=45.4
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC-CcccHHH----HHhcCCcE-EE--eCCCCc-c----cc---CCCC
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATS-STRNLEF----LKSLGADL-AI--DYTKDN-F----ED---LPEK 296 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~-~~~~~~~----~~~~G~~~-vi--~~~~~~-~----~~---~~~~ 296 (392)
+++|+|+||+|++|...++.+.. .|++|+++.+ +.++.+. ++..|... .+ |..+.. . .+ ....
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~-~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQ-QGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999998888777 5999988765 3333322 23445332 22 332211 1 11 1236
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 81 id~li~~ag 89 (256)
T PRK12743 81 IDVLVNNAG 89 (256)
T ss_pred CCEEEECCC
Confidence 899998876
No 378
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=93.82 E-value=0.33 Score=44.46 Aligned_cols=73 Identities=21% Similarity=0.348 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCc-EEE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGAD-LAI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~-~vi--~~~~~~-~~~-------~~~~ 296 (392)
.|.+++|+||+|++|...+..... .|++++++.+++++++.+ ++.|.. ..+ |..+.. +.. ..+.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAG-AGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999988876655 499999998877654433 233422 122 332211 111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 89 id~vi~~ag 97 (256)
T PRK06124 89 LDILVNNVG 97 (256)
T ss_pred CCEEEECCC
Confidence 899998877
No 379
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.82 E-value=0.28 Score=49.78 Aligned_cols=69 Identities=23% Similarity=0.296 Sum_probs=49.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc-----cHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR-----NLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~-----~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G 305 (392)
..+++|+|+| .|++|+.++.+++. .|.+|++++..+. ..+.+++.|.....+.... ...++|+|+.+.|
T Consensus 14 ~~~~~v~viG-~G~~G~~~A~~L~~-~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAG-LGVSGFAAADALLE-LGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----ccCCCCEEEECCC
Confidence 3577999998 89999999999888 5999888875542 2244667787654432221 2346899998887
No 380
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.81 E-value=0.32 Score=45.65 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=29.9
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST 268 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~ 268 (392)
-.|.+++|+||++++|.+.++.+.. .|+++++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~-~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAA-EGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHH-CCCEEEEeeCCc
Confidence 4578999999999999987776655 499998887643
No 381
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=93.79 E-value=0.64 Score=40.34 Aligned_cols=89 Identities=20% Similarity=0.257 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCc-EEEeCCCCccccCCCCccEEEecC
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGAD-LAIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~-~vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
..++++||=+| .|.|..+..+++. +.+++.++.+++..+.+++ .+.. .++..+. .....+.+|+|+-..
T Consensus 17 ~~~~~~vLdlG--~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~--~~~~~~~fD~Vi~n~ 90 (179)
T TIGR00537 17 ELKPDDVLEIG--AGTGLVAIRLKGK--GKCILTTDINPFAVKELRENAKLNNVGLDVVMTDL--FKGVRGKFDVILFNP 90 (179)
T ss_pred hcCCCeEEEeC--CChhHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccc--ccccCCcccEEEECC
Confidence 45567888886 4567778888864 5578888888887776654 3322 1222111 111234689888542
Q ss_pred c------------------------------cHHHHHHhcccCCeEEEEc
Q 016265 305 G------------------------------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 305 G------------------------------~~~~~~~~l~~~G~iv~~g 324 (392)
. -+..+.+.|++||+++.+.
T Consensus 91 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~ 140 (179)
T TIGR00537 91 PYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQ 140 (179)
T ss_pred CCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEE
Confidence 1 0356667899999987663
No 382
>PRK07074 short chain dehydrogenase; Provisional
Probab=93.78 E-value=0.3 Score=44.74 Aligned_cols=41 Identities=20% Similarity=0.285 Sum_probs=33.2
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
+.+++|+||+|++|...+..+.. .|+++++++++.++.+.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~-~g~~v~~~~r~~~~~~~~ 42 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLA-AGDRVLALDIDAAALAAF 42 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 46899999999999998776666 499999998877766544
No 383
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=93.77 E-value=0.68 Score=41.23 Aligned_cols=90 Identities=16% Similarity=0.123 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc-ccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc--HH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST-RNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ--CD 308 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~-~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~--~~ 308 (392)
.|.+|+|.| +|.+|...+..+.. .|++++++.... +.+..+.+.|. ..+...... .....++|+||-|++. ++
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~-~ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~-~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLK-YGAHIVVISPELTENLVKLVEEGK-IRWKQKEFE-PSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC-hhhcCCceEEEEcCCCHHHH
Confidence 578999998 89999988776666 488888776432 12222222221 112211111 1123578999999984 44
Q ss_pred HHHHhcccCCeEEEEcC
Q 016265 309 RAVKAIKEGGTVVALTG 325 (392)
Q Consensus 309 ~~~~~l~~~G~iv~~g~ 325 (392)
..+...+..+.++....
T Consensus 85 ~~i~~~a~~~~lvn~~d 101 (202)
T PRK06718 85 EQVKEDLPENALFNVIT 101 (202)
T ss_pred HHHHHHHHhCCcEEECC
Confidence 44444444456665543
No 384
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.76 E-value=0.38 Score=45.42 Aligned_cols=93 Identities=25% Similarity=0.202 Sum_probs=64.3
Q ss_pred ccchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
.+||+......-|+..++ -.|.+|+|+|.++-+|.-.+.++.. .|+.|.+..+... +..
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~-~gatVtv~~~~t~-------------------~l~ 197 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQ-AHCSVTVVHSRST-------------------DAK 197 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHH-CCCEEEEECCCCC-------------------CHH
Confidence 456665555556666554 4699999999667999988888877 4998888755332 223
Q ss_pred cCCCCccEEEecCccH---HHHHHhcccCCeEEEEcCCC
Q 016265 292 DLPEKFDVVYDAIGQC---DRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~---~~~~~~l~~~G~iv~~g~~~ 327 (392)
+..+..|+||-++|.. ... .+++|..++.+|...
T Consensus 198 e~~~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin~ 234 (301)
T PRK14194 198 ALCRQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGINR 234 (301)
T ss_pred HHHhcCCEEEEecCChhcccHh--hccCCcEEEEecccc
Confidence 3334679999999842 222 388999999887543
No 385
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.76 E-value=0.3 Score=51.85 Aligned_cols=42 Identities=26% Similarity=0.304 Sum_probs=34.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.|.+|||+||+|++|...++.... .|++|++++++.++.+.+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~-~Ga~Vvi~~r~~~~~~~~ 454 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAA-EGAHVVLADLNLEAAEAV 454 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHh-CCCEEEEEeCCHHHHHHH
Confidence 478999999999999998877766 499999998877665443
No 386
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=93.73 E-value=0.39 Score=48.70 Aligned_cols=96 Identities=20% Similarity=0.328 Sum_probs=62.7
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc--CCcEEEeCCCCcccc--C-CCCccEE
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL--GADLAIDYTKDNFED--L-PEKFDVV 300 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~--G~~~vi~~~~~~~~~--~-~~~~D~v 300 (392)
+...++++++||=+| +|. |..+..+++. .+++++.++.+++.++.+++. +...-+.....++.. . .+.||+|
T Consensus 260 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~-~~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 336 (475)
T PLN02336 260 DKLDLKPGQKVLDVG-CGI-GGGDFYMAEN-FDVHVVGIDLSVNMISFALERAIGRKCSVEFEVADCTKKTYPDNSFDVI 336 (475)
T ss_pred HhcCCCCCCEEEEEe-ccC-CHHHHHHHHh-cCCEEEEEECCHHHHHHHHHHhhcCCCceEEEEcCcccCCCCCCCEEEE
Confidence 345567889999997 554 7778888887 489999999998877777542 221111111111111 1 2469999
Q ss_pred EecCc---------cHHHHHHhcccCCeEEEEc
Q 016265 301 YDAIG---------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 301 id~~G---------~~~~~~~~l~~~G~iv~~g 324 (392)
+..-. .+..+.+.|+|||+++...
T Consensus 337 ~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~ 369 (475)
T PLN02336 337 YSRDTILHIQDKPALFRSFFKWLKPGGKVLISD 369 (475)
T ss_pred EECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 86421 1478889999999988653
No 387
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.72 E-value=0.34 Score=44.95 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=27.3
Q ss_pred CCCeEEEEcCCC--cHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGSG--GVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~G--~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.|.+++|+||++ ++|.+.++.... .|++++++.++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~-~G~~vil~~r~ 41 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHR-EGAELAFTYQN 41 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHH-CCCEEEEEecc
Confidence 478999999875 899986666555 49998887765
No 388
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.72 E-value=0.35 Score=44.62 Aligned_cols=89 Identities=18% Similarity=0.244 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCCc---EEEeCCCCccc-cCCCCccEEEe
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGAD---LAIDYTKDNFE-DLPEKFDVVYD 302 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~~---~vi~~~~~~~~-~~~~~~D~vid 302 (392)
..+.+||=+| +|.|..+..+++. |.+++.++.+++.++.+++ .|.. .++..+-.++. ...+.||+|+.
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~--g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~ 118 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL--GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILF 118 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEe
Confidence 4567888886 5668899999974 8899999999988877754 3322 12222222222 12457999985
Q ss_pred cCc---------cHHHHHHhcccCCeEEEE
Q 016265 303 AIG---------QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 303 ~~G---------~~~~~~~~l~~~G~iv~~ 323 (392)
... .+..+.+.|+|||+++.+
T Consensus 119 ~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 119 HAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred hhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 422 157888999999999765
No 389
>PLN02214 cinnamoyl-CoA reductase
Probab=93.72 E-value=0.44 Score=46.03 Aligned_cols=74 Identities=16% Similarity=0.297 Sum_probs=47.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH--HHHhcC---Cc-EEE--eCCC-CccccCCCCccEEE
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE--FLKSLG---AD-LAI--DYTK-DNFEDLPEKFDVVY 301 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~--~~~~~G---~~-~vi--~~~~-~~~~~~~~~~D~vi 301 (392)
..+.+|+|+||+|.+|...+..+.. .|.+|++++++.++.. .++.+. .. .++ |..+ ..+.+..+++|+||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLE-RGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-CcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 3577999999999999998887766 4999998887655321 122221 11 122 2222 12233345799999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
.+.+
T Consensus 87 h~A~ 90 (342)
T PLN02214 87 HTAS 90 (342)
T ss_pred EecC
Confidence 9876
No 390
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=93.71 E-value=1.2 Score=40.29 Aligned_cols=94 Identities=13% Similarity=0.143 Sum_probs=61.4
Q ss_pred cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cCCcEE--------------EeCCCCcccc
Q 016265 228 TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LGADLA--------------IDYTKDNFED 292 (392)
Q Consensus 228 ~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~~v--------------i~~~~~~~~~ 292 (392)
....+|.+|||-| + |-|.=++.||.+ |.+|+.++-++.-.+.+.+ .+.... ++.-..++-+
T Consensus 39 l~~~~~~rvLvPg-C-Gkg~D~~~LA~~--G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~ 114 (226)
T PRK13256 39 LNINDSSVCLIPM-C-GCSIDMLFFLSK--GVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFN 114 (226)
T ss_pred cCCCCCCeEEEeC-C-CChHHHHHHHhC--CCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcC
Confidence 3445678999997 4 458888989974 9999999998887776533 221110 1111111111
Q ss_pred C------CCCccEEEecCc--c---------HHHHHHhcccCCeEEEEcC
Q 016265 293 L------PEKFDVVYDAIG--Q---------CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 293 ~------~~~~D~vid~~G--~---------~~~~~~~l~~~G~iv~~g~ 325 (392)
. .+.||.|+|..- . .+.+.++|++||+++.+..
T Consensus 115 l~~~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~ 164 (226)
T PRK13256 115 LPKIANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM 164 (226)
T ss_pred CCccccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 1 246999999754 1 3678888999999887743
No 391
>PRK06484 short chain dehydrogenase; Validated
Probab=93.70 E-value=0.23 Score=50.88 Aligned_cols=73 Identities=25% Similarity=0.374 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcE---EEeCCCCc-ccc-------CCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADL---AIDYTKDN-FED-------LPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~---vi~~~~~~-~~~-------~~~~~D~ 299 (392)
.|.+++|+||++++|.+.++.+.. .|++|+++.++.++++.+ +++|... .+|..+.. +.+ ..+++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFAR-AGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 578999999999999998887766 499999998887776554 4555432 23333221 111 1246899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|++.|
T Consensus 83 li~nag 88 (520)
T PRK06484 83 LVNNAG 88 (520)
T ss_pred EEECCC
Confidence 998865
No 392
>PRK07402 precorrin-6B methylase; Provisional
Probab=93.69 E-value=0.87 Score=40.15 Aligned_cols=96 Identities=13% Similarity=0.207 Sum_probs=59.1
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCcE--EEeCCCCc-cccCCCCcc
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGADL--AIDYTKDN-FEDLPEKFD 298 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~~--vi~~~~~~-~~~~~~~~D 298 (392)
....++++++||=.| .|.|..++.+++...+.+++.++.+++..+.++ ++|.+. ++..+... +......+|
T Consensus 34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d 111 (196)
T PRK07402 34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPD 111 (196)
T ss_pred HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCC
Confidence 455778899888776 345667777776533578899999888777664 355432 22222111 122222344
Q ss_pred E-EEecCcc----HHHHHHhcccCCeEEEE
Q 016265 299 V-VYDAIGQ----CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 299 ~-vid~~G~----~~~~~~~l~~~G~iv~~ 323 (392)
. +++.... ++.+.+.|++||+++..
T Consensus 112 ~v~~~~~~~~~~~l~~~~~~LkpgG~li~~ 141 (196)
T PRK07402 112 RVCIEGGRPIKEILQAVWQYLKPGGRLVAT 141 (196)
T ss_pred EEEEECCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 4 4443222 47888899999998766
No 393
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=93.66 E-value=1.1 Score=44.87 Aligned_cols=96 Identities=23% Similarity=0.240 Sum_probs=59.7
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHH----HhcCCcE--EEeCCCCccc----cCCC
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFL----KSLGADL--AIDYTKDNFE----DLPE 295 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~----~~~G~~~--vi~~~~~~~~----~~~~ 295 (392)
...+++|++||=.| +| .|..+..+++.+. ..++++++.++++++.+ +.+|.+. ++..+...+. ...+
T Consensus 247 ~l~~~~g~~VLDl~-ag-~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~ 324 (434)
T PRK14901 247 LLDPQPGEVILDAC-AA-PGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELKPQWRG 324 (434)
T ss_pred HhCCCCcCEEEEeC-CC-CchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccccccccc
Confidence 34678899887775 33 3555566666542 24788888898888766 4467653 2222222222 1134
Q ss_pred CccEEE-e--cCc--c--------------------------HHHHHHhcccCCeEEEEc
Q 016265 296 KFDVVY-D--AIG--Q--------------------------CDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 296 ~~D~vi-d--~~G--~--------------------------~~~~~~~l~~~G~iv~~g 324 (392)
.||.|+ | |+| . ++.+++.|++||++|...
T Consensus 325 ~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvyst 384 (434)
T PRK14901 325 YFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYAT 384 (434)
T ss_pred cCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 699887 4 444 1 356788999999998653
No 394
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=93.65 E-value=0.22 Score=47.85 Aligned_cols=84 Identities=14% Similarity=0.164 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHH-HhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAK-QVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ---- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak-~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~---- 306 (392)
.|.+|.|+| .|.+|...++.++ . +|.+|++.++... .+....+|... .++.++-+..|+|+-++..
T Consensus 144 ~gktvGIiG-~G~IG~~va~~l~~~-fgm~V~~~~~~~~-~~~~~~~~~~~------~~l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVG-MGRIGMALAQRAHFG-FNMPILYNARRHH-KEAEERFNARY------CDLDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHhc-CCCEEEEECCCCc-hhhHHhcCcEe------cCHHHHHHhCCEEEEeCCCChHH
Confidence 578999998 9999999999998 6 7999887776432 22223444321 1344555677988877651
Q ss_pred ---H-HHHHHhcccCCeEEEEc
Q 016265 307 ---C-DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 307 ---~-~~~~~~l~~~G~iv~~g 324 (392)
+ ...++.|+++..+|.++
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~a 236 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAG 236 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECC
Confidence 1 56888899988888664
No 395
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.65 E-value=0.42 Score=44.84 Aligned_cols=84 Identities=14% Similarity=0.132 Sum_probs=54.9
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc------HH
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ------CD 308 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~------~~ 308 (392)
+|.|+| .|.+|...+..++. .|.+|++.++++++.+.+.+.|..... ..+. +..+.+|+||.|+.. ++
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~-~g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~~-~~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRS-LGHTVYGVSRRESTCERAIERGLVDEA---STDL-SLLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHCCCcccc---cCCH-hHhcCCCEEEEcCCHHHHHHHHH
Confidence 588998 99999877776666 488899999988888888877742211 1111 123578999999872 23
Q ss_pred HHHHhcccCCeEEEEc
Q 016265 309 RAVKAIKEGGTVVALT 324 (392)
Q Consensus 309 ~~~~~l~~~G~iv~~g 324 (392)
.....++++-.+..++
T Consensus 76 ~l~~~l~~~~ii~d~~ 91 (279)
T PRK07417 76 QLIPALPPEAIVTDVG 91 (279)
T ss_pred HHHHhCCCCcEEEeCc
Confidence 3444455554444433
No 396
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.65 E-value=0.55 Score=44.35 Aligned_cols=86 Identities=24% Similarity=0.297 Sum_probs=54.6
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcE---EEe---CCCCccccCCCCccEEEecCc--c
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADL---AID---YTKDNFEDLPEKFDVVYDAIG--Q 306 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~---vi~---~~~~~~~~~~~~~D~vid~~G--~ 306 (392)
+|+|+| +|.+|.+.+..+.. .|.+|.++++++++.+.+++.|... ... ....+..+. +.+|+||-|+. .
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~~-~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~ 78 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALAQ-AGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ 78 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHHh-CCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc
Confidence 589998 89999987776666 4888999988777777777666421 000 001112222 67999999976 3
Q ss_pred HHHHHHhcc----cCCeEEEE
Q 016265 307 CDRAVKAIK----EGGTVVAL 323 (392)
Q Consensus 307 ~~~~~~~l~----~~G~iv~~ 323 (392)
.+.+++.++ ++..++.+
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 444444443 44456654
No 397
>PLN02780 ketoreductase/ oxidoreductase
Probab=93.64 E-value=0.13 Score=49.24 Aligned_cols=42 Identities=19% Similarity=0.172 Sum_probs=34.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.|.+++|+||++++|...+..... .|++++++.+++++++.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~-~G~~Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLAR-KGLNLVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHH-CCCCEEEEECCHHHHHHH
Confidence 589999999999999887665545 499999999988877654
No 398
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.64 E-value=0.38 Score=39.49 Aligned_cols=85 Identities=20% Similarity=0.402 Sum_probs=55.1
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcC--CeEEEEeC--Cccc-HHHHHhcCCcEEEeCCCCcccc------------------
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFG--ASRVAATS--STRN-LEFLKSLGADLAIDYTKDNFED------------------ 292 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G--~~vv~~~~--~~~~-~~~~~~~G~~~vi~~~~~~~~~------------------ 292 (392)
|.|+|++|.||..+..+.+. +. .+++.... +-++ .+.+++|....++-.++.....
T Consensus 1 i~ILGsTGSIG~qtLdVi~~-~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRK-HPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHH-CTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHh-CCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 68999999999999999998 46 56766553 3333 3455778887776554432111
Q ss_pred -----C--CCCccEEEec-Cc--cHHHHHHhcccCCeEE
Q 016265 293 -----L--PEKFDVVYDA-IG--QCDRAVKAIKEGGTVV 321 (392)
Q Consensus 293 -----~--~~~~D~vid~-~G--~~~~~~~~l~~~G~iv 321 (392)
. ...+|+|+.+ +| .+.-.+.+++.|=++.
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 0 1368999998 46 5677788888765543
No 399
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.63 E-value=0.34 Score=43.74 Aligned_cols=73 Identities=23% Similarity=0.331 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcEE---EeCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADLA---IDYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~v---i~~~~~~-~~~-------~~~~ 296 (392)
++.+|||+||+|++|...+..... .|.+++++.+++++.+.+ +..+.... .|..+.. +.+ .-..
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAA-DGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 357899999999999998887766 599988888887765433 33443322 2332221 111 1235
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|.+|.+.|
T Consensus 83 id~vi~~ag 91 (246)
T PRK05653 83 LDILVNNAG 91 (246)
T ss_pred CCEEEECCC
Confidence 799999875
No 400
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.29 Score=44.47 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=32.4
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHH
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEF 273 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~ 273 (392)
.+++|+||+|++|...++.+.. .|++|+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~-~G~~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAA-AGARLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHH
Confidence 4799999999999998887766 49999999887766543
No 401
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=93.58 E-value=1.1 Score=44.74 Aligned_cols=97 Identities=21% Similarity=0.187 Sum_probs=60.1
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH----hcCCc-EEEeCCCCcccc--CCCCcc
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK----SLGAD-LAIDYTKDNFED--LPEKFD 298 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~----~~G~~-~vi~~~~~~~~~--~~~~~D 298 (392)
...++++|++||=.| +| .|..+..+++...+.+++.++.++++++.++ ++|.. .++..+...... ..+.||
T Consensus 238 ~~l~~~~g~~VLDlg-aG-~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~~~~~~~~~~fD 315 (427)
T PRK10901 238 TLLAPQNGERVLDAC-AA-PGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDARDPAQWWDGQPFD 315 (427)
T ss_pred HHcCCCCCCEEEEeC-CC-CChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcccchhhcccCCCC
Confidence 345678999988886 33 3556667776642368889999998877764 45543 223222221111 124699
Q ss_pred EEE-e--cCc----------------------------cHHHHHHhcccCCeEEEEc
Q 016265 299 VVY-D--AIG----------------------------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 299 ~vi-d--~~G----------------------------~~~~~~~~l~~~G~iv~~g 324 (392)
.|+ | |+| -+..+.+.|+|||+++...
T Consensus 316 ~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst 372 (427)
T PRK10901 316 RILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT 372 (427)
T ss_pred EEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 887 2 332 0356777899999998654
No 402
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.56 E-value=0.46 Score=44.55 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=66.1
Q ss_pred ccchhHHHHHHHHHhcCCC-CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGFS-AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
..||.....+..|+..++. .|.+|+|+|.+.-+|.-.+.++.. .|+.|.++...... ..
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~-~~atVtv~hs~T~~-------------------l~ 202 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLN-RNATVSVCHVFTDD-------------------LK 202 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHH-CCCEEEEEeccCCC-------------------HH
Confidence 4566665566667766654 799999999777799999999987 59988776643222 22
Q ss_pred cCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCC
Q 016265 292 DLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~ 326 (392)
+..+.+|++|.++|... ---+.+++|..++.+|..
T Consensus 203 ~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin 238 (287)
T PRK14176 203 KYTLDADILVVATGVKHLIKADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHhhCCEEEEccCCccccCHHHcCCCcEEEEeccc
Confidence 33456799999998321 123478899888888764
No 403
>PRK06932 glycerate dehydrogenase; Provisional
Probab=93.54 E-value=0.21 Score=47.76 Aligned_cols=100 Identities=19% Similarity=0.186 Sum_probs=67.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...+++++. +|++|++.++.... ... ....++.++-...|+|+-+...
T Consensus 146 ~gktvgIiG-~G~IG~~va~~l~~-fg~~V~~~~~~~~~-----~~~------~~~~~l~ell~~sDiv~l~~Plt~~T~ 212 (314)
T PRK06932 146 RGSTLGVFG-KGCLGTEVGRLAQA-LGMKVLYAEHKGAS-----VCR------EGYTPFEEVLKQADIVTLHCPLTETTQ 212 (314)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhc-CCCEEEEECCCccc-----ccc------cccCCHHHHHHhCCEEEEcCCCChHHh
Confidence 478999998 99999999999998 79999887653211 000 0012344555578999887651
Q ss_pred --H-HHHHHhcccCCeEEEEcCCCCCCceEEEEeecHHHHHHHHHHHHCCCcc
Q 016265 307 --C-DRAVKAIKEGGTVVALTGAVTPPGFRFVVTSNGEVLKKLNPYLESGKVK 356 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 356 (392)
+ ...++.|++|..+|.++-... -+-+.+.+.+++|++.
T Consensus 213 ~li~~~~l~~mk~ga~lIN~aRG~~------------Vde~AL~~aL~~g~i~ 253 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGRGPL------------VDEQALLDALENGKIA 253 (314)
T ss_pred cccCHHHHHhCCCCeEEEECCCccc------------cCHHHHHHHHHcCCcc
Confidence 2 688899999999887753220 0124556667777765
No 404
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=93.53 E-value=0.2 Score=47.29 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=44.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCc---ccHHH-HHhcC---Cc---EEEeCCCC-ccccCCCCcc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSST---RNLEF-LKSLG---AD---LAIDYTKD-NFEDLPEKFD 298 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~---~~~~~-~~~~G---~~---~vi~~~~~-~~~~~~~~~D 298 (392)
-.+.+++|+| +|++|.+++..+.. .|++ ++++.++. +|.+. ++++. .. ...+..+. .+.+....+|
T Consensus 124 ~~~k~vlI~G-AGGagrAia~~La~-~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D 201 (289)
T PRK12548 124 VKGKKLTVIG-AGGAATAIQVQCAL-DGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD 201 (289)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHH-CCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence 3578999999 58999998876666 4886 77777775 44333 33332 11 11232221 2222334679
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
++|+|+.
T Consensus 202 ilINaTp 208 (289)
T PRK12548 202 ILVNATL 208 (289)
T ss_pred EEEEeCC
Confidence 9999974
No 405
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=93.50 E-value=0.63 Score=39.79 Aligned_cols=95 Identities=27% Similarity=0.303 Sum_probs=55.6
Q ss_pred ccchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
.+|+.....+..|+..++ -.|++|+|.|.+.-+|.-.+.+... .|+.|.+.....+.++.
T Consensus 15 ~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~-~~atVt~~h~~T~~l~~------------------ 75 (160)
T PF02882_consen 15 FVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLN-KGATVTICHSKTKNLQE------------------ 75 (160)
T ss_dssp S--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHH-TT-EEEEE-TTSSSHHH------------------
T ss_pred CcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHh-CCCeEEeccCCCCcccc------------------
Confidence 445555555556665543 5789999999888999998888888 59988777654433322
Q ss_pred cCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCCC
Q 016265 292 DLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~~ 327 (392)
..+..|+|+.++|..+ ---+.+++|..++.+|...
T Consensus 76 -~~~~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 76 -ITRRADIVVSAVGKPNLIKADWIKPGAVVIDVGINY 111 (160)
T ss_dssp -HHTTSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEE
T ss_pred -eeeeccEEeeeeccccccccccccCCcEEEecCCcc
Confidence 2235688888888422 1223678887888776543
No 406
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.47 E-value=0.29 Score=44.91 Aligned_cols=37 Identities=32% Similarity=0.457 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR 269 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~ 269 (392)
.|.+|||+||+|++|...++.+.. .|++++++.++..
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~-~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLE-AGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHH-CCCEEEEEeCChh
Confidence 478999999999999998887766 4999998887654
No 407
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.44 E-value=0.39 Score=43.44 Aligned_cols=73 Identities=25% Similarity=0.388 Sum_probs=46.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcCCcE-EE--eCCCC-cccc-------CCCCccE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLGADL-AI--DYTKD-NFED-------LPEKFDV 299 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G~~~-vi--~~~~~-~~~~-------~~~~~D~ 299 (392)
++.+++|+||+|++|...+..... .|+.+++..++.++++.+ .+++... ++ |..+. .+.+ ...++|+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHA-QGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467999999999999987777666 488777777766665544 3344221 22 22221 1111 1246899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 84 vi~~ag 89 (245)
T PRK12936 84 LVNNAG 89 (245)
T ss_pred EEECCC
Confidence 999876
No 408
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=93.43 E-value=0.27 Score=47.17 Aligned_cols=90 Identities=21% Similarity=0.258 Sum_probs=57.7
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc----CCcEEEeCCCCcccc---CCCCccEEEe
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL----GADLAIDYTKDNFED---LPEKFDVVYD 302 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~----G~~~vi~~~~~~~~~---~~~~~D~vid 302 (392)
..+|.+||=+| +| .|..+..+++ .|++++.++.+++.++.+++. +...-+.+...+..+ ..+.||+|+.
T Consensus 129 ~~~g~~ILDIG-CG-~G~~s~~La~--~g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~dae~l~~~~~~FD~Vi~ 204 (322)
T PLN02396 129 PFEGLKFIDIG-CG-GGLLSEPLAR--MGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLS 204 (322)
T ss_pred CCCCCEEEEee-CC-CCHHHHHHHH--cCCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEecCHHHhhhccCCCCEEEE
Confidence 45677888887 43 3666777775 389999999999988887642 111112222222222 2357999985
Q ss_pred cC-----c----cHHHHHHhcccCCeEEEE
Q 016265 303 AI-----G----QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 303 ~~-----G----~~~~~~~~l~~~G~iv~~ 323 (392)
.- . .+..+.++|+|||.++..
T Consensus 205 ~~vLeHv~d~~~~L~~l~r~LkPGG~liis 234 (322)
T PLN02396 205 LEVIEHVANPAEFCKSLSALTIPNGATVLS 234 (322)
T ss_pred hhHHHhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 32 1 257788899999998765
No 409
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.42 E-value=0.38 Score=44.55 Aligned_cols=70 Identities=16% Similarity=0.146 Sum_probs=45.4
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCC-cccc-------CCCCccE
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKD-NFED-------LPEKFDV 299 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~-~~~~-------~~~~~D~ 299 (392)
+|+|+||+|++|...+..... .|++|++++++.++++.+ ++.|.+. .+ |..+. .+.+ ...++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAR-EGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 689999999999998776656 599999998877665433 2334332 22 22221 1111 1246899
Q ss_pred EEecCc
Q 016265 300 VYDAIG 305 (392)
Q Consensus 300 vid~~G 305 (392)
+|.+.|
T Consensus 81 lI~~ag 86 (270)
T PRK05650 81 IVNNAG 86 (270)
T ss_pred EEECCC
Confidence 999877
No 410
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.42 E-value=0.39 Score=44.30 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=27.9
Q ss_pred CCCeEEEEcCC--CcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGS--GGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~--G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.|++++|+||+ +++|.+.++.... .|++|+++.++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~-~G~~v~~~~r~ 42 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHN-AGAKLVFTYAG 42 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-CCCEEEEecCc
Confidence 47899999986 7999997776655 49998887654
No 411
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.40 E-value=0.37 Score=44.80 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
...+++|+||+|++|...++.+.. .|++|+++.++.++.+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~-~G~~V~~~~r~~~~~~ 48 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAA-AGFPVALGARRVEKCE 48 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHH
Confidence 346899999999999998877666 4999888887666544
No 412
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=93.40 E-value=0.38 Score=43.63 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
.+.+|+|+||+|++|...+..... .|.+|++++++.++..
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~-~g~~V~~~~r~~~~~~ 44 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAA-DGAEVIVVDICGDDAA 44 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHH
Confidence 467899999999999988876666 4999999888765543
No 413
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.40 E-value=0.39 Score=46.29 Aligned_cols=83 Identities=16% Similarity=0.262 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...++.++. +|.+|++.++++.+.... . .+ ..+..+..+..|+|+.++..
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~~-~G~~V~~~d~~~~~~~~~----~----~~-~~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYAG-FGATITAYDAYPNKDLDF----L----TY-KDSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEeCChhHhhhh----h----hc-cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence 567899998 99999999999988 699999998765432211 0 01 12344455678999988762
Q ss_pred ---HHHHHHhcccCCeEEEEcC
Q 016265 307 ---CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 307 ---~~~~~~~l~~~G~iv~~g~ 325 (392)
....+..++++..+|..+-
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 1466778888888877653
No 414
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=93.39 E-value=0.3 Score=50.14 Aligned_cols=84 Identities=23% Similarity=0.323 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...++.++. +|+++++.++... .+....+|...+ ++.+..+..|+|+-++..
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~-~~~~~~~g~~~~------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKA-FGMKVIAYDPYIS-PERAAQLGVELV------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCC-hhHHHhcCCEEE------cHHHHHhhCCEEEEccCCChHhh
Confidence 478999998 99999999999998 6999998887432 233445555322 233444566777776541
Q ss_pred --H-HHHHHhcccCCeEEEEc
Q 016265 307 --C-DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g 324 (392)
+ ...++.|+++..+|.++
T Consensus 210 ~li~~~~l~~mk~ga~lIN~a 230 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCA 230 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECC
Confidence 1 45677777777777664
No 415
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.37 E-value=0.4 Score=44.27 Aligned_cols=73 Identities=21% Similarity=0.287 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~~-~~~-------~~~~ 296 (392)
.+.+++|+||++++|...+..... .|++++++.+++++++.+ ++.|... .+ |..+.. ..+ ...+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAK-AGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 567999999999999887765555 499999888877665433 2334332 22 322211 111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|.+.|
T Consensus 88 id~li~~ag 96 (265)
T PRK07097 88 IDILVNNAG 96 (265)
T ss_pred CCEEEECCC
Confidence 899999876
No 416
>PRK07340 ornithine cyclodeaminase; Validated
Probab=93.36 E-value=0.26 Score=46.86 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=60.6
Q ss_pred cCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCe-EEEEeCCcccHHH-HHhcC---CcEEEeCCCCccccCCCCccEEEe
Q 016265 228 TGFSAGKSILVLNGSGGVGSLVIQLAKQVFGAS-RVAATSSTRNLEF-LKSLG---ADLAIDYTKDNFEDLPEKFDVVYD 302 (392)
Q Consensus 228 ~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~-vv~~~~~~~~~~~-~~~~G---~~~vi~~~~~~~~~~~~~~D~vid 302 (392)
..-....+++|+| +|..|.+.+..+...++.+ +.+..++.+|.+. ++++. .... ..+..+..+++|+|+.
T Consensus 120 La~~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~----~~~~~~av~~aDiVit 194 (304)
T PRK07340 120 LAPAPPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE----PLDGEAIPEAVDLVVT 194 (304)
T ss_pred hCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE----ECCHHHHhhcCCEEEE
Confidence 3334567899998 9999999888876545754 5566777776554 34443 2211 1234444568999999
Q ss_pred cCcc----HHHHHHhcccCCeEEEEcCCC
Q 016265 303 AIGQ----CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 303 ~~G~----~~~~~~~l~~~G~iv~~g~~~ 327 (392)
|+.+ +.. .++||-.+..+|.+.
T Consensus 195 aT~s~~Pl~~~---~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 195 ATTSRTPVYPE---AARAGRLVVAVGAFT 220 (304)
T ss_pred ccCCCCceeCc---cCCCCCEEEecCCCC
Confidence 9873 232 378888888888654
No 417
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.36 E-value=0.22 Score=49.11 Aligned_cols=41 Identities=20% Similarity=0.284 Sum_probs=33.8
Q ss_pred CCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc
Q 016265 229 GFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN 270 (392)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~ 270 (392)
+...+.+|+|+||+|.+|...+..+.. .|.+|++++++..+
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~-~G~~V~~l~R~~~~ 96 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVR-RGYNVVAVAREKSG 96 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEEechhh
Confidence 445678999999999999999887776 49999999886543
No 418
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.35 E-value=0.34 Score=44.09 Aligned_cols=73 Identities=21% Similarity=0.277 Sum_probs=45.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEE-eCCcccHHH----HHhcCCcE-EE--eCCCCc-cc----c---CCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAA-TSSTRNLEF----LKSLGADL-AI--DYTKDN-FE----D---LPE 295 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~-~~~~~~~~~----~~~~G~~~-vi--~~~~~~-~~----~---~~~ 295 (392)
.|.+++|+||+|++|+..+..... .|+++++. .++.++.+. +++.+... .+ |..+.. .. + ..+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~-~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAE-EGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999998887776 59988764 455554432 23344332 22 222211 11 1 123
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
++|++|.+.|
T Consensus 82 ~id~vi~~ag 91 (250)
T PRK08063 82 RLDVFVNNAA 91 (250)
T ss_pred CCCEEEECCC
Confidence 6899999876
No 419
>PLN00203 glutamyl-tRNA reductase
Probab=93.35 E-value=0.37 Score=49.22 Aligned_cols=92 Identities=20% Similarity=0.307 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHH-hcC-CcE-EEeCCCCccccCCCCccEEEecCcc-
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLK-SLG-ADL-AIDYTKDNFEDLPEKFDVVYDAIGQ- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~-~~G-~~~-vi~~~~~~~~~~~~~~D~vid~~G~- 306 (392)
.+.+|+|+| +|.+|.+++..+.. .|+ +++++.++.++.+.+. +++ ... +... .+..+...++|+||.|+++
T Consensus 265 ~~kkVlVIG-AG~mG~~~a~~L~~-~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~--~dl~~al~~aDVVIsAT~s~ 340 (519)
T PLN00203 265 ASARVLVIG-AGKMGKLLVKHLVS-KGCTKMVVVNRSEERVAALREEFPDVEIIYKPL--DEMLACAAEADVVFTSTSSE 340 (519)
T ss_pred CCCEEEEEe-CHHHHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH--hhHHHHHhcCCEEEEccCCC
Confidence 368899998 79999999998887 586 5777788888766554 453 221 1121 1222334578999999873
Q ss_pred ----HHHHHHhccc----CC---eEEEEcCCC
Q 016265 307 ----CDRAVKAIKE----GG---TVVALTGAV 327 (392)
Q Consensus 307 ----~~~~~~~l~~----~G---~iv~~g~~~ 327 (392)
....++.+.+ +| .+++++.+.
T Consensus 341 ~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 341 TPLFLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred CCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 2444444422 23 366666553
No 420
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.35 E-value=0.33 Score=46.31 Aligned_cols=74 Identities=20% Similarity=0.240 Sum_probs=46.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh----cCC---cEEE--eCCCC-ccccCCCCccEE
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS----LGA---DLAI--DYTKD-NFEDLPEKFDVV 300 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~----~G~---~~vi--~~~~~-~~~~~~~~~D~v 300 (392)
..|.+|||+||+|.+|...+..+.. .|.+|++++++..+.+.... .+. -..+ |..+. .+.+..+++|+|
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 81 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLF-RGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETV 81 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHH-CCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEE
Confidence 3478999999999999998887766 49998887766554332211 121 1122 32221 233334478999
Q ss_pred EecCc
Q 016265 301 YDAIG 305 (392)
Q Consensus 301 id~~G 305 (392)
|.+.|
T Consensus 82 ih~A~ 86 (325)
T PLN02989 82 FHTAS 86 (325)
T ss_pred EEeCC
Confidence 99876
No 421
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=93.35 E-value=0.69 Score=41.13 Aligned_cols=78 Identities=21% Similarity=0.245 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCcEEEeCCCCccccCCCCccEEEecC-cc-H
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGADLAIDYTKDNFEDLPEKFDVVYDAI-GQ-C 307 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~~vi~~~~~~~~~~~~~~D~vid~~-G~-~ 307 (392)
-.|.+|+|.| .|.+|..+++.+.. .|+++++.+.+.++++.+. .+|+. .++..+ + ....+|+++-|. +. +
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~-~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~--l--~~~~~Dv~vp~A~~~~I 98 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLE-EGAKLIVADINEEAVARAAELFGAT-VVAPEE--I--YSVDADVFAPCALGGVI 98 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHcCCE-EEcchh--h--ccccCCEEEeccccccc
Confidence 4678999998 89999999999988 5999998888887776664 44653 333311 1 112578888664 32 1
Q ss_pred -HHHHHhcc
Q 016265 308 -DRAVKAIK 315 (392)
Q Consensus 308 -~~~~~~l~ 315 (392)
...++.++
T Consensus 99 ~~~~~~~l~ 107 (200)
T cd01075 99 NDDTIPQLK 107 (200)
T ss_pred CHHHHHHcC
Confidence 34445553
No 422
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.34 E-value=0.48 Score=44.56 Aligned_cols=46 Identities=26% Similarity=0.274 Sum_probs=39.9
Q ss_pred CCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH
Q 016265 229 GFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK 275 (392)
Q Consensus 229 ~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~ 275 (392)
+.++-..|+|.|++.++|++.+..++. .|+.|.++.++.+|+..++
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~-~ga~Vti~ar~~~kl~~a~ 74 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKR-EGADVTITARSGKKLLEAK 74 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHH-ccCceEEEeccHHHHHHHH
Confidence 344557899999999999999999988 5999999999999988775
No 423
>PRK06436 glycerate dehydrogenase; Provisional
Probab=93.32 E-value=0.28 Score=46.59 Aligned_cols=81 Identities=28% Similarity=0.329 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...+++++. +|.++++.+++... .|..... .++.+.....|+|+.+...
T Consensus 121 ~gktvgIiG-~G~IG~~vA~~l~a-fG~~V~~~~r~~~~------~~~~~~~----~~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILG-YGGIGRRVALLAKA-FGMNIYAYTRSYVN------DGISSIY----MEPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHH-CCCEEEEECCCCcc------cCccccc----CCHHHHHhhCCEEEECCCCCchhh
Confidence 589999998 99999999999998 69999998875321 1221111 1234444567877777541
Q ss_pred --H-HHHHHhcccCCeEEEEc
Q 016265 307 --C-DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g 324 (392)
+ ...++.|+++..+|.++
T Consensus 189 ~li~~~~l~~mk~ga~lIN~s 209 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVA 209 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECC
Confidence 1 45677777777776664
No 424
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=93.28 E-value=0.33 Score=49.84 Aligned_cols=85 Identities=26% Similarity=0.377 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...++.++. +|+++++.++... .+...++|...+ .++.+.....|+|+-++..
T Consensus 137 ~gktvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~-~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lPlt~~T~ 208 (525)
T TIGR01327 137 YGKTLGVIG-LGRIGSIVAKRAKA-FGMKVLAYDPYIS-PERAEQLGVELV-----DDLDELLARADFITVHTPLTPETR 208 (525)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCC-hhHHHhcCCEEc-----CCHHHHHhhCCEEEEccCCChhhc
Confidence 578999998 99999999999998 6999998886422 233445554211 1234444566777766541
Q ss_pred --H-HHHHHhcccCCeEEEEc
Q 016265 307 --C-DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g 324 (392)
+ ...++.|+++..+|.++
T Consensus 209 ~li~~~~l~~mk~ga~lIN~a 229 (525)
T TIGR01327 209 GLIGAEELAKMKKGVIIVNCA 229 (525)
T ss_pred cCcCHHHHhcCCCCeEEEEcC
Confidence 1 45666777777666654
No 425
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.28 E-value=0.24 Score=44.83 Aligned_cols=69 Identities=25% Similarity=0.350 Sum_probs=50.7
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc--cHHHHHhcCCcEEE-eCCC-CccccCCCCccEEEecCc
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR--NLEFLKSLGADLAI-DYTK-DNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~--~~~~~~~~G~~~vi-~~~~-~~~~~~~~~~D~vid~~G 305 (392)
|+|+||+|.+|...++.+.. .+.+|.+.+++.. +.+.++..|+..+. |+.+ +.+.+.-+|+|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecC
Confidence 79999999999999998887 5899999998764 35667788886442 2322 222333469999999887
No 426
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.22 E-value=0.38 Score=45.86 Aligned_cols=73 Identities=25% Similarity=0.310 Sum_probs=45.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc----CC--c-EEE--eCCC-CccccCCCCccEEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL----GA--D-LAI--DYTK-DNFEDLPEKFDVVY 301 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~----G~--~-~vi--~~~~-~~~~~~~~~~D~vi 301 (392)
.|.+|||+||+|.+|...+..+.. .|.+|++++++..+.+.+..+ +. . ..+ |..+ ..+.+..+++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLL-RGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 478999999999999988887666 499988888766543332211 11 1 112 2211 12233345789999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
.+.+
T Consensus 83 h~A~ 86 (322)
T PLN02986 83 HTAS 86 (322)
T ss_pred EeCC
Confidence 8865
No 427
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.18 E-value=1.4 Score=44.18 Aligned_cols=97 Identities=14% Similarity=0.182 Sum_probs=61.4
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHH----hcCCcE--EEeCCCCccc-cCCCCcc
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLK----SLGADL--AIDYTKDNFE-DLPEKFD 298 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~----~~G~~~--vi~~~~~~~~-~~~~~~D 298 (392)
..++++|++||=.| +| -|-.+++++..+. +.+++.++.++.+++.++ ++|.+. ++..+...+. ...+.||
T Consensus 232 ~l~~~~g~~VLD~c-ag-pGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l~~~~~~~fD 309 (431)
T PRK14903 232 LMELEPGLRVLDTC-AA-PGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAERLTEYVQDTFD 309 (431)
T ss_pred HhCCCCCCEEEEeC-CC-ccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhhhhhhhhccCC
Confidence 34678899887775 43 3555666666532 468899999999987764 467653 2222222222 1234699
Q ss_pred EEEe---cCc--c--------------------------HHHHHHhcccCCeEEEEcC
Q 016265 299 VVYD---AIG--Q--------------------------CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 299 ~vid---~~G--~--------------------------~~~~~~~l~~~G~iv~~g~ 325 (392)
.|+- |+| . +..+++.|++||+++....
T Consensus 310 ~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 367 (431)
T PRK14903 310 RILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTC 367 (431)
T ss_pred EEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9873 443 1 3467888999999876644
No 428
>PRK06487 glycerate dehydrogenase; Provisional
Probab=93.18 E-value=0.26 Score=47.16 Aligned_cols=79 Identities=22% Similarity=0.338 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCcc-----
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQ----- 306 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~----- 306 (392)
.|.+|.|+| .|.+|...++.++. +|++|++.++.... . ... ..++.++-...|+|+.+...
T Consensus 147 ~gktvgIiG-~G~IG~~vA~~l~~-fgm~V~~~~~~~~~-~-----~~~------~~~l~ell~~sDiv~l~lPlt~~T~ 212 (317)
T PRK06487 147 EGKTLGLLG-HGELGGAVARLAEA-FGMRVLIGQLPGRP-A-----RPD------RLPLDELLPQVDALTLHCPLTEHTR 212 (317)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhh-CCCEEEEECCCCCc-c-----ccc------ccCHHHHHHhCCEEEECCCCChHHh
Confidence 578999998 99999999999998 79999888764211 0 011 11344445567888877541
Q ss_pred --H-HHHHHhcccCCeEEEEc
Q 016265 307 --C-DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 307 --~-~~~~~~l~~~G~iv~~g 324 (392)
+ ...++.|+++..+|.++
T Consensus 213 ~li~~~~~~~mk~ga~lIN~a 233 (317)
T PRK06487 213 HLIGARELALMKPGALLINTA 233 (317)
T ss_pred cCcCHHHHhcCCCCeEEEECC
Confidence 1 67888888888887665
No 429
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.13 E-value=0.4 Score=45.70 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcC-CeEEEEeCCcccHHHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFG-ASRVAATSSTRNLEFL 274 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G-~~vv~~~~~~~~~~~~ 274 (392)
+.+++|+||++++|...+..... .| .+++++.+++++.+.+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~-~G~~~V~l~~r~~~~~~~~ 44 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAA-TGEWHVIMACRDFLKAEQA 44 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-cCCCEEEEEeCCHHHHHHH
Confidence 56899999999999987765555 48 8888888877765544
No 430
>PRK08703 short chain dehydrogenase; Provisional
Probab=93.13 E-value=0.22 Score=45.14 Aligned_cols=42 Identities=29% Similarity=0.396 Sum_probs=34.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.|.+++|+||+|++|...++.... .|++|+++.+++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~-~g~~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAA-AGATVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-cCCEEEEEeCChHHHHHH
Confidence 467999999999999998887776 599999999887765543
No 431
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.12 E-value=1 Score=42.23 Aligned_cols=94 Identities=21% Similarity=0.169 Sum_probs=66.7
Q ss_pred ccchhHHHHHHHHHhcCCC-CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGFS-AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
..||.....+..|+..++. .|.+|+|+|-+.-+|.-.++++.. .++.|.++.+.... +.
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~-~~atVtv~hs~T~~-------------------l~ 197 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLL-AGCTVTVCHRFTKN-------------------LR 197 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHH-CCCeEEEEECCCCC-------------------HH
Confidence 3466666666677766543 699999999777799999998887 59988777653222 23
Q ss_pred cCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCC
Q 016265 292 DLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~ 326 (392)
+..+.+|++|.++|... ---+.+++|..++.+|..
T Consensus 198 ~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin 233 (285)
T PRK10792 198 HHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccc
Confidence 33456799999998321 222678999999988854
No 432
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.10 E-value=0.38 Score=44.45 Aligned_cols=73 Identities=22% Similarity=0.305 Sum_probs=42.8
Q ss_pred CCCeEEEEcC--CCcHHHHHHHHHHHhcCCeEEEEeCC---cccHHHH-HhcCCcEEE--eCCCC-cccc-------CCC
Q 016265 232 AGKSILVLNG--SGGVGSLVIQLAKQVFGASRVAATSS---TRNLEFL-KSLGADLAI--DYTKD-NFED-------LPE 295 (392)
Q Consensus 232 ~g~~VlI~Ga--~G~vG~~aiqlak~~~G~~vv~~~~~---~~~~~~~-~~~G~~~vi--~~~~~-~~~~-------~~~ 295 (392)
.|.+++|+|| ++++|.+.++.... .|++++++.+. +++++.+ ++++....+ |..+. ...+ .-+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~-~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKR-EGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHH-CCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4789999996 57999997766555 49998887532 2333333 344533222 32221 1111 124
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
++|++|++.|
T Consensus 84 ~iD~lvnnAG 93 (260)
T PRK06997 84 GLDGLVHSIG 93 (260)
T ss_pred CCcEEEEccc
Confidence 6899888765
No 433
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=93.05 E-value=0.11 Score=42.52 Aligned_cols=91 Identities=18% Similarity=0.169 Sum_probs=46.6
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC-Ccc-c--HHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc--cHH
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATS-STR-N--LEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG--QCD 308 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~-~~~-~--~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G--~~~ 308 (392)
+|+|+|..|-+|...++.+....+.+++.+.. ++. . .+...-.|....=-....+..+..+.+|++||++. ...
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~p~~~~ 81 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTNPDAVY 81 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-HHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCChHHhH
Confidence 68999977999999999998855777676543 331 1 11111111110000001233444445899999985 233
Q ss_pred HHHHhcccCCeEEEEcC
Q 016265 309 RAVKAIKEGGTVVALTG 325 (392)
Q Consensus 309 ~~~~~l~~~G~iv~~g~ 325 (392)
..++.+...|.-+.+|.
T Consensus 82 ~~~~~~~~~g~~~ViGT 98 (124)
T PF01113_consen 82 DNLEYALKHGVPLVIGT 98 (124)
T ss_dssp HHHHHHHHHT-EEEEE-
T ss_pred HHHHHHHhCCCCEEEEC
Confidence 44444444465555543
No 434
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=92.97 E-value=0.54 Score=42.66 Aligned_cols=73 Identities=22% Similarity=0.306 Sum_probs=44.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC-Cccc-HHH---HHhcCCcEE---EeCCCC-cccc-------CCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATS-STRN-LEF---LKSLGADLA---IDYTKD-NFED-------LPE 295 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~-~~~~-~~~---~~~~G~~~v---i~~~~~-~~~~-------~~~ 295 (392)
.+.+++|+|++|++|...++.+.. .|+++++... .+.+ .+. +++.+.... .|..+. ...+ ..+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHK-DGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-cCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 367899999999999998887766 4998887543 2222 222 233454332 232221 1111 124
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
++|++|.+.|
T Consensus 81 ~id~li~~ag 90 (246)
T PRK12938 81 EIDVLVNNAG 90 (246)
T ss_pred CCCEEEECCC
Confidence 7899999987
No 435
>PRK06940 short chain dehydrogenase; Provisional
Probab=92.96 E-value=0.79 Score=42.70 Aligned_cols=90 Identities=20% Similarity=0.305 Sum_probs=55.1
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCCc-ccc----C--CCCcc
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKDN-FED----L--PEKFD 298 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~~-~~~----~--~~~~D 298 (392)
+++++|.|+ |++|...+... . .|++|+++++++++++.+ +..|... ++ |..+.. ..+ . -.++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l-~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRV-G-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHH-h-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 357888885 89999988877 3 499999998877665433 2234321 22 333221 111 1 24689
Q ss_pred EEEecCcc---------------------HHHHHHhcccCCeEEEEcC
Q 016265 299 VVYDAIGQ---------------------CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 299 ~vid~~G~---------------------~~~~~~~l~~~G~iv~~g~ 325 (392)
++|.+.|. ++.+++.++.+|+++.++.
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS 126 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS 126 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence 99999871 1334455666787776643
No 436
>PRK07890 short chain dehydrogenase; Provisional
Probab=92.93 E-value=0.23 Score=45.40 Aligned_cols=43 Identities=26% Similarity=0.314 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
-.+.+++|+||+|++|...+..+.. .|++|+++++++++.+.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~-~G~~V~~~~r~~~~~~~~ 45 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAAR-AGADVVLAARTAERLDEV 45 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHH-cCCEEEEEeCCHHHHHHH
Confidence 3578999999999999998877666 599999998877665444
No 437
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.89 E-value=0.51 Score=43.86 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR 269 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~ 269 (392)
.+.+++|+||+|++|...+..+.. .|++++++.++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAAR-DGANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEecccc
Confidence 467999999999999988876666 4999998887543
No 438
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=92.88 E-value=1.1 Score=35.58 Aligned_cols=85 Identities=18% Similarity=0.214 Sum_probs=58.1
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCc---cccC-CCCccEEEecCccH----
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDN---FEDL-PEKFDVVYDAIGQC---- 307 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~---~~~~-~~~~D~vid~~G~~---- 307 (392)
|+|.| .|.+|...++.++. .+.++++++.++++.+.+++.|.. ++..+..+ +.+. .+.+|.++-+++.-
T Consensus 1 vvI~G-~g~~~~~i~~~L~~-~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~ 77 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKE-GGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENL 77 (116)
T ss_dssp EEEES--SHHHHHHHHHHHH-TTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHH
T ss_pred eEEEc-CCHHHHHHHHHHHh-CCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHH
Confidence 67888 89999999999988 577899999999999999988854 44433322 2222 35789888887731
Q ss_pred --HHHHHhcccCCeEEEE
Q 016265 308 --DRAVKAIKEGGTVVAL 323 (392)
Q Consensus 308 --~~~~~~l~~~G~iv~~ 323 (392)
-..++-+.+..+++..
T Consensus 78 ~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 78 LIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 2344445556666544
No 439
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=92.86 E-value=0.26 Score=41.78 Aligned_cols=71 Identities=24% Similarity=0.382 Sum_probs=41.2
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEE-EEeCC--cccHHHH----HhcCCcE-EE--eCCCC-cccc-------CCC
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRV-AATSS--TRNLEFL----KSLGADL-AI--DYTKD-NFED-------LPE 295 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv-~~~~~--~~~~~~~----~~~G~~~-vi--~~~~~-~~~~-------~~~ 295 (392)
++++|+||++++|...++..-. .|+.++ ++.++ .++.+.+ ++.+... ++ |..+. .... ...
T Consensus 1 k~~lItGa~~giG~~~a~~l~~-~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALAR-RGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHh-cCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999997776655 367554 55556 3433332 4445322 22 22211 1111 124
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
.+|++|.+.|
T Consensus 80 ~ld~li~~ag 89 (167)
T PF00106_consen 80 PLDILINNAG 89 (167)
T ss_dssp SESEEEEECS
T ss_pred cccccccccc
Confidence 6899998877
No 440
>PRK08219 short chain dehydrogenase; Provisional
Probab=92.85 E-value=0.33 Score=43.39 Aligned_cols=71 Identities=17% Similarity=0.250 Sum_probs=45.4
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHh-cCCcEEE--eCCCC-ccccC---CCCccEEEecCc
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKS-LGADLAI--DYTKD-NFEDL---PEKFDVVYDAIG 305 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~-~G~~~vi--~~~~~-~~~~~---~~~~D~vid~~G 305 (392)
..+++|+||+|.+|...+..+.. . .+|++++++.++.+.+.+ ...-+++ |..+. .+.+. .+++|.+|.+.|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~-~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAP-T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHh-h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 35799999999999998887765 4 788888888776555442 2112223 22221 11111 136899999876
No 441
>PRK05855 short chain dehydrogenase; Validated
Probab=92.80 E-value=0.39 Score=49.56 Aligned_cols=73 Identities=25% Similarity=0.280 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE-EE--eCCCCc-ccc-------CCCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL-AI--DYTKDN-FED-------LPEK 296 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~-vi--~~~~~~-~~~-------~~~~ 296 (392)
.+.++||+||+|++|...++.+.. .|++|+++.++.++++.+ ++.|... ++ |..+.. ..+ ..+.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAR-EGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 457899999999999987776666 499999998887766543 2334322 22 322211 111 1246
Q ss_pred ccEEEecCc
Q 016265 297 FDVVYDAIG 305 (392)
Q Consensus 297 ~D~vid~~G 305 (392)
+|++|++.|
T Consensus 393 id~lv~~Ag 401 (582)
T PRK05855 393 PDIVVNNAG 401 (582)
T ss_pred CcEEEECCc
Confidence 899999977
No 442
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=92.79 E-value=0.35 Score=46.71 Aligned_cols=87 Identities=20% Similarity=0.235 Sum_probs=50.6
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCC---eEEEEeCCcccHHHHHhcCCcEEEe-CCCCccccCCCCccEEEecCcc---
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGA---SRVAATSSTRNLEFLKSLGADLAID-YTKDNFEDLPEKFDVVYDAIGQ--- 306 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~---~vv~~~~~~~~~~~~~~~G~~~vi~-~~~~~~~~~~~~~D~vid~~G~--- 306 (392)
-+|+|.||+|.+|...++++.. .+. ++..+.+....-+.+.-.|.+..+. ... .+. +++|+||.|+|+
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~-~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~---~~~-~~vDvVf~A~g~g~s 76 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEE-RNFPVDKLRLLASARSAGKELSFKGKELKVEDLTT---FDF-SGVDIALFSAGGSVS 76 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHh-CCCCcceEEEEEccccCCCeeeeCCceeEEeeCCH---HHH-cCCCEEEECCChHHH
Confidence 4799999999999999999876 344 3345444322212121112222222 111 122 479999999984
Q ss_pred HHHHHHhcccCCeEEEEcC
Q 016265 307 CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 307 ~~~~~~~l~~~G~iv~~g~ 325 (392)
.+.+-+.+..|.+++.++.
T Consensus 77 ~~~~~~~~~~G~~VIDlS~ 95 (334)
T PRK14874 77 KKYAPKAAAAGAVVIDNSS 95 (334)
T ss_pred HHHHHHHHhCCCEEEECCc
Confidence 2444445566667776654
No 443
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.77 E-value=0.35 Score=43.75 Aligned_cols=40 Identities=30% Similarity=0.412 Sum_probs=31.8
Q ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEE-eCCcccHHH
Q 016265 233 GKSILVLNGSGGVGSLVIQLAKQVFGASRVAA-TSSTRNLEF 273 (392)
Q Consensus 233 g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~-~~~~~~~~~ 273 (392)
+.++||+||+|++|...+..+.. .|++++++ .++.++.+.
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~-~g~~v~~~~~r~~~~~~~ 45 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAK-EGAKVVIAYDINEEAAQE 45 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHH
Confidence 56899999999999988876655 49999888 777665543
No 444
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=92.76 E-value=0.36 Score=44.50 Aligned_cols=38 Identities=32% Similarity=0.432 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN 270 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~ 270 (392)
.+.+++|+||+|++|.+.++.+.. .|++++++++++.+
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~-~G~~v~~~~~~~~~ 45 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLA-NGANVVNADIHGGD 45 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCccc
Confidence 467999999999999998877766 49999988876554
No 445
>PLN02306 hydroxypyruvate reductase
Probab=92.73 E-value=0.37 Score=47.37 Aligned_cols=91 Identities=18% Similarity=0.289 Sum_probs=59.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHH-HhcCCeEEEEeCCccc-HH-HHHhcCCcEE------EeCC-CCccccCCCCccEEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAK-QVFGASRVAATSSTRN-LE-FLKSLGADLA------IDYT-KDNFEDLPEKFDVVY 301 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak-~~~G~~vv~~~~~~~~-~~-~~~~~G~~~v------i~~~-~~~~~~~~~~~D~vi 301 (392)
.|.+|.|+| .|.+|...++.++ . +|++|++.++.... .+ ....+|.+.. .... ..++.++-...|+|+
T Consensus 164 ~gktvGIiG-~G~IG~~vA~~l~~~-fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV~ 241 (386)
T PLN02306 164 KGQTVGVIG-AGRIGSAYARMMVEG-FKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVIS 241 (386)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhc-CCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEEE
Confidence 478999998 9999999999975 5 79999988875432 11 1122331100 0000 123455556789888
Q ss_pred ecCc------cH--HHHHHhcccCCeEEEEc
Q 016265 302 DAIG------QC--DRAVKAIKEGGTVVALT 324 (392)
Q Consensus 302 d~~G------~~--~~~~~~l~~~G~iv~~g 324 (392)
-+.. .+ ...++.|++|..+|.++
T Consensus 242 lh~Plt~~T~~lin~~~l~~MK~ga~lIN~a 272 (386)
T PLN02306 242 LHPVLDKTTYHLINKERLALMKKEAVLVNAS 272 (386)
T ss_pred EeCCCChhhhhhcCHHHHHhCCCCeEEEECC
Confidence 8654 11 67888999998888775
No 446
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=92.69 E-value=0.78 Score=43.22 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=49.5
Q ss_pred HHHhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC---CcccHHHHHhcCCcEEEeCC
Q 016265 224 GLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATS---STRNLEFLKSLGADLAIDYT 286 (392)
Q Consensus 224 al~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~---~~~~~~~~~~~G~~~vi~~~ 286 (392)
+..+..+++|+ .+|-+-+|..|.+.+.+|+. +|.+++++.. +.+|++.++.+|+..++...
T Consensus 53 Ae~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 53 AEKRGLLKPGG-TIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHcCCCCCCC-EEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44566799999 55666799999999999988 5999998864 78899999999998776554
No 447
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=92.63 E-value=0.55 Score=45.11 Aligned_cols=89 Identities=15% Similarity=0.113 Sum_probs=58.4
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE------Ee---CCCCccccCCCCccEEEecC
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA------ID---YTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v------i~---~~~~~~~~~~~~~D~vid~~ 304 (392)
-+|.|+| +|.+|.+.+..+.. .|.+|.+..+++++.+.+.+.+.... +. ....+..+..+.+|+||-|+
T Consensus 5 m~I~iIG-~G~mG~~ia~~L~~-~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 5 MRVAVLG-AGAWGTALAVLAAS-KGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CeEEEEC-cCHHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 4799998 99999988777665 48889999998887776665421100 00 00112223345789999997
Q ss_pred c--cHHHHHHhcccCCeEEEEc
Q 016265 305 G--QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 305 G--~~~~~~~~l~~~G~iv~~g 324 (392)
. ..+.+++.++++-.++.+.
T Consensus 83 ~~~~~~~v~~~l~~~~~vi~~~ 104 (328)
T PRK14618 83 PSKALRETLAGLPRALGYVSCA 104 (328)
T ss_pred chHHHHHHHHhcCcCCEEEEEe
Confidence 6 3567777777776666553
No 448
>PLN00016 RNA-binding protein; Provisional
Probab=92.62 E-value=0.51 Score=46.27 Aligned_cols=90 Identities=20% Similarity=0.237 Sum_probs=57.0
Q ss_pred CCeEEEE----cCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH-----------HHHhcCCcEEEeCCCCccccC--CC
Q 016265 233 GKSILVL----NGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE-----------FLKSLGADLAIDYTKDNFEDL--PE 295 (392)
Q Consensus 233 g~~VlI~----Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~-----------~~~~~G~~~vi~~~~~~~~~~--~~ 295 (392)
..+|||+ ||+|-+|...+..+.. .|.+|++++++..+.. .+...|...+. .+-.++.+. ..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~D~~d~~~~~~~~ 129 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVK-AGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-GDPADVKSKVAGA 129 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHH-CCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-ecHHHHHhhhccC
Confidence 4689999 9999999988887766 4999999988765422 12233443332 111122222 24
Q ss_pred CccEEEecCcc----HHHHHHhcccCC--eEEEEc
Q 016265 296 KFDVVYDAIGQ----CDRAVKAIKEGG--TVVALT 324 (392)
Q Consensus 296 ~~D~vid~~G~----~~~~~~~l~~~G--~iv~~g 324 (392)
++|+||++.+. ...++++++..| ++|.++
T Consensus 130 ~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~S 164 (378)
T PLN00016 130 GFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCS 164 (378)
T ss_pred CccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEc
Confidence 79999999772 345566665433 687764
No 449
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=92.58 E-value=0.98 Score=42.95 Aligned_cols=87 Identities=15% Similarity=0.198 Sum_probs=53.2
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhc-CCcEEEeCCCCc-c------ccCCCCccEEEecCc
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSL-GADLAIDYTKDN-F------EDLPEKFDVVYDAIG 305 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~-G~~~vi~~~~~~-~------~~~~~~~D~vid~~G 305 (392)
.+|+|+| +|++|...+..+.. .|.+|.+++++.++++..++. |. .+.+..... + .+..+.+|+||-|+=
T Consensus 3 m~I~IiG-aGaiG~~~a~~L~~-~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILG-AGSLGSLWACRLAR-AGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEEC-CCHHHHHHHHHHHh-CCCCeEEEEechHHHHHHhhcCCe-EEeeCCcceeeccCCCCcccccccCEEEEECC
Confidence 3699998 99999865544444 388999999987777767643 43 121111100 0 111246899999975
Q ss_pred --cH----HHHHHhcccCCeEEEE
Q 016265 306 --QC----DRAVKAIKEGGTVVAL 323 (392)
Q Consensus 306 --~~----~~~~~~l~~~G~iv~~ 323 (392)
.. ..+...+.++..++.+
T Consensus 80 ~~~~~~al~~l~~~l~~~t~vv~l 103 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPGAELLLL 103 (305)
T ss_pred HHhHHHHHHHHHhhCCCCCEEEEE
Confidence 22 3444455667766665
No 450
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=92.57 E-value=0.6 Score=42.93 Aligned_cols=39 Identities=18% Similarity=0.358 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC-CcccH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATS-STRNL 271 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~-~~~~~ 271 (392)
.|++++|+||++++|...+..... .|++++++.+ ++++.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~-~G~~v~~~~~~~~~~~ 46 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQ-SGVNIAFTYNSNVEEA 46 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHH
Confidence 578999999999999998876666 4999887754 44443
No 451
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=92.55 E-value=2.2 Score=39.67 Aligned_cols=96 Identities=22% Similarity=0.239 Sum_probs=58.6
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHH----hcCCcEE--EeCCCCccccCCCCccE
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLK----SLGADLA--IDYTKDNFEDLPEKFDV 299 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~----~~G~~~v--i~~~~~~~~~~~~~~D~ 299 (392)
...+++|++||=.| +| .|-.++.++..+. ...++.++.++.+++.++ ++|.+.+ +..+...+....+.||+
T Consensus 66 ~l~~~~g~~VLDl~-ag-~G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~fD~ 143 (264)
T TIGR00446 66 ALEPDPPERVLDMA-AA-PGGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFGAAVPKFDA 143 (264)
T ss_pred HhCCCCcCEEEEEC-CC-chHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhhhhccCCCE
Confidence 34678999888776 44 4555566666532 247888899999887663 4565432 22222222222345998
Q ss_pred EEe---cCcc----------------------------HHHHHHhcccCCeEEEEc
Q 016265 300 VYD---AIGQ----------------------------CDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 300 vid---~~G~----------------------------~~~~~~~l~~~G~iv~~g 324 (392)
|+- |+|. +..+++++++||+++...
T Consensus 144 Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYst 199 (264)
T TIGR00446 144 ILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYST 199 (264)
T ss_pred EEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 873 3331 246778899999997553
No 452
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=92.54 E-value=1.5 Score=43.98 Aligned_cols=95 Identities=19% Similarity=0.268 Sum_probs=58.4
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHh-cCCeEEEEeCCcccHHHHH----hcCCcE--EEeCCCCccc-cCCCCcc
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQV-FGASRVAATSSTRNLEFLK----SLGADL--AIDYTKDNFE-DLPEKFD 298 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~-~G~~vv~~~~~~~~~~~~~----~~G~~~--vi~~~~~~~~-~~~~~~D 298 (392)
...+++|++||=.| + +.|..++.+++.+ .+.+++.++.++++++.++ ++|.+. ++..+..... ...+.||
T Consensus 245 ~l~~~~g~~VLDlg-a-G~G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~~fD 322 (444)
T PRK14902 245 ALDPKGGDTVLDAC-A-APGGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDARKVHEKFAEKFD 322 (444)
T ss_pred HhCCCCCCEEEEeC-C-CCCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCcccccchhcccCC
Confidence 44678889888776 3 3455666677653 1457888898988877664 456543 2222211111 1235799
Q ss_pred EEEe---cCcc----------------------------HHHHHHhcccCCeEEEE
Q 016265 299 VVYD---AIGQ----------------------------CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 299 ~vid---~~G~----------------------------~~~~~~~l~~~G~iv~~ 323 (392)
+|+- |+|. +..+.++|++||+++..
T Consensus 323 ~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys 378 (444)
T PRK14902 323 KILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS 378 (444)
T ss_pred EEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 8873 3331 35677889999999854
No 453
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.53 E-value=0.84 Score=43.10 Aligned_cols=94 Identities=21% Similarity=0.180 Sum_probs=64.2
Q ss_pred ccchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEe-CCcccHHHHHhcCCcEEEeCCCCcc
Q 016265 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAAT-SSTRNLEFLKSLGADLAIDYTKDNF 290 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~-~~~~~~~~~~~~G~~~vi~~~~~~~ 290 (392)
.+||+....+..|+..++ -.|.+|+|+|-++.+|.-.+.++.. .|+.|.+.. ++. . .
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~-~g~tVtv~~~rT~-~-------------------l 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLA-ANATVTIAHSRTR-D-------------------L 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHh-CCCEEEEECCCCC-C-------------------H
Confidence 356665555556665554 4799999999999999988888776 499888774 332 1 1
Q ss_pred ccCCCCccEEEecCccHHHHHH-hcccCCeEEEEcCCC
Q 016265 291 EDLPEKFDVVYDAIGQCDRAVK-AIKEGGTVVALTGAV 327 (392)
Q Consensus 291 ~~~~~~~D~vid~~G~~~~~~~-~l~~~G~iv~~g~~~ 327 (392)
.+..+..|+|+-|+|..+..-. .+++|..++.+|...
T Consensus 196 ~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 PAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINR 233 (296)
T ss_pred HHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcc
Confidence 2233467999999985322211 388988888888654
No 454
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=92.50 E-value=0.99 Score=46.79 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=53.3
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEe-CCCCcc-cc-CCCCccEEEecCc
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAID-YTKDNF-ED-LPEKFDVVYDAIG 305 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~-~~~~~~-~~-~~~~~D~vid~~G 305 (392)
++++|.| .|.+|+..++..+. .|.++++++.++++.+.+++.|...+.- ..+++. ++ ..+.+|.++-+++
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~-~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLA-AGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 6889998 99999999999887 5999999999999999999988665542 222221 22 2357898887766
No 455
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=92.50 E-value=0.46 Score=43.80 Aligned_cols=34 Identities=21% Similarity=0.080 Sum_probs=26.8
Q ss_pred CCCeEEEEcCC--CcHHHHHHHHHHHhcCCeEEEEeC
Q 016265 232 AGKSILVLNGS--GGVGSLVIQLAKQVFGASRVAATS 266 (392)
Q Consensus 232 ~g~~VlI~Ga~--G~vG~~aiqlak~~~G~~vv~~~~ 266 (392)
.|++++|+||+ +++|.+.+..... .|++|+++.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~-~G~~v~~~~~ 40 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHA-AGAELGITYL 40 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHH-CCCEEEEEec
Confidence 47899999975 7999997776655 4999887754
No 456
>PRK09186 flagellin modification protein A; Provisional
Probab=92.49 E-value=0.29 Score=44.74 Aligned_cols=42 Identities=29% Similarity=0.411 Sum_probs=34.3
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL 274 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~ 274 (392)
.|.+|+|+||+|++|...+..+.. .|++++++.+++++.+.+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~ 44 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILE-AGGIVIAADIDKEALNEL 44 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEecChHHHHHH
Confidence 478999999999999998877766 599999888877765443
No 457
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=92.49 E-value=0.53 Score=45.56 Aligned_cols=74 Identities=22% Similarity=0.266 Sum_probs=46.4
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-Hhc--CCc-EEE--eCCC-CccccCCCCccEEEec
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSL--GAD-LAI--DYTK-DNFEDLPEKFDVVYDA 303 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~--G~~-~vi--~~~~-~~~~~~~~~~D~vid~ 303 (392)
..+.+|||+||+|.+|...++.+.. .|.+|++++++..+.+.+ ..+ +.. .++ |..+ ..+.+..+++|+||.+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQ-RGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 4577999999999999998887776 499999888765544332 222 111 122 2111 1122333468888887
Q ss_pred Cc
Q 016265 304 IG 305 (392)
Q Consensus 304 ~G 305 (392)
.+
T Consensus 87 A~ 88 (353)
T PLN02896 87 AA 88 (353)
T ss_pred Cc
Confidence 64
No 458
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.48 E-value=2.4 Score=40.69 Aligned_cols=38 Identities=24% Similarity=0.179 Sum_probs=30.7
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHH
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEF 273 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~ 273 (392)
.+|.|+| +|.+|...++.+.. .|.+|++.+.+++.++.
T Consensus 8 ~~VaVIG-aG~MG~giA~~~a~-aG~~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIG-SGVIGSGWVARALA-HGLDVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEEC-cCHHHHHHHHHHHh-CCCeEEEEeCCHHHHHH
Confidence 5799998 99999887777666 59999999988776544
No 459
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=92.46 E-value=0.65 Score=49.84 Aligned_cols=67 Identities=22% Similarity=0.320 Sum_probs=50.2
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcC--CeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCCCccEEEecCc
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFG--ASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G--~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G 305 (392)
++|.|+| .|.+|.+.++.++. .| .++++.++++++.+.++++|+. +....+..+..+..|+||.|+.
T Consensus 4 ~~I~IIG-~G~mG~ala~~l~~-~G~~~~V~~~d~~~~~~~~a~~~g~~---~~~~~~~~~~~~~aDvVilavp 72 (735)
T PRK14806 4 GRVVVIG-LGLIGGSFAKALRE-RGLAREVVAVDRRAKSLELAVSLGVI---DRGEEDLAEAVSGADVIVLAVP 72 (735)
T ss_pred cEEEEEe-eCHHHHHHHHHHHh-cCCCCEEEEEECChhHHHHHHHCCCC---CcccCCHHHHhcCCCEEEECCC
Confidence 6799998 99999999998887 47 4678888888888888888853 1112223333457899999987
No 460
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.36 E-value=1.1 Score=39.93 Aligned_cols=72 Identities=22% Similarity=0.340 Sum_probs=47.3
Q ss_pred CCeEEEEcC-CCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHH-hcCCc-EEEeCCCCc-ccc--------CCCCccEE
Q 016265 233 GKSILVLNG-SGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLK-SLGAD-LAIDYTKDN-FED--------LPEKFDVV 300 (392)
Q Consensus 233 g~~VlI~Ga-~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~-~~G~~-~vi~~~~~~-~~~--------~~~~~D~v 300 (392)
...|||.|. .||+|.+.+.-... .|+.|+++.++-++...+. ++|.. .-+|..+++ ..+ -.++.|+.
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~-~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFAR-NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHh-CCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 457888865 79999986655444 5999999999888877775 77732 233433322 111 12457888
Q ss_pred EecCc
Q 016265 301 YDAIG 305 (392)
Q Consensus 301 id~~G 305 (392)
++..|
T Consensus 86 ~NNAG 90 (289)
T KOG1209|consen 86 YNNAG 90 (289)
T ss_pred EcCCC
Confidence 88766
No 461
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=92.36 E-value=0.46 Score=46.01 Aligned_cols=92 Identities=21% Similarity=0.154 Sum_probs=51.7
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH-HhcC-CcE--EEeCCCCccccCCCCccEEEecCcc---
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL-KSLG-ADL--AIDYTKDNFEDLPEKFDVVYDAIGQ--- 306 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~-~~~G-~~~--vi~~~~~~~~~~~~~~D~vid~~G~--- 306 (392)
-+|+|+|++|.+|...++++...-+.+++.+.+...+.+.+ +.++ ... ...+.+.+.. ...++|+||-|++.
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~-~~~~vD~Vf~alP~~~~ 81 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE-ILAGADVVFLALPHGVS 81 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH-HhcCCCEEEECCCcHHH
Confidence 37999999999999887777653356766665532222222 2222 100 0011111111 22468999999873
Q ss_pred HHHHHHhcccCCeEEEEcCC
Q 016265 307 CDRAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 307 ~~~~~~~l~~~G~iv~~g~~ 326 (392)
.+.+..+++.|-.+|+.++.
T Consensus 82 ~~~v~~a~~aG~~VID~S~~ 101 (343)
T PRK00436 82 MDLAPQLLEAGVKVIDLSAD 101 (343)
T ss_pred HHHHHHHHhCCCEEEECCcc
Confidence 35555555656567777644
No 462
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=92.30 E-value=1.3 Score=41.68 Aligned_cols=85 Identities=19% Similarity=0.251 Sum_probs=58.1
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc-HHHHHhcCCcEEEeCCCCccccCCCCccEEEecCccH------
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN-LEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQC------ 307 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~-~~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~~------ 307 (392)
+|.++| .|-+|.-.++=+.. .|..+.+.++++++ .+.+++.|+...-+ ..+.....|+||-|++.-
T Consensus 2 kIafIG-LG~MG~pmA~~L~~-aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s-----~~eaa~~aDvVitmv~~~~~V~~V 74 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLK-AGHEVTVYNRTPEKAAELLAAAGATVAAS-----PAEAAAEADVVITMLPDDAAVRAV 74 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHH-CCCEEEEEeCChhhhhHHHHHcCCcccCC-----HHHHHHhCCEEEEecCCHHHHHHH
Confidence 578888 99999775555555 39999999999998 88888888754321 233345678888887621
Q ss_pred ----HHHHHhcccCCeEEEEcCC
Q 016265 308 ----DRAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 308 ----~~~~~~l~~~G~iv~~g~~ 326 (392)
+-.++.+++|..+|.++..
T Consensus 75 ~~g~~g~~~~~~~G~i~IDmSTi 97 (286)
T COG2084 75 LFGENGLLEGLKPGAIVIDMSTI 97 (286)
T ss_pred HhCccchhhcCCCCCEEEECCCC
Confidence 2344556677777776543
No 463
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=92.29 E-value=0.61 Score=40.74 Aligned_cols=89 Identities=25% Similarity=0.369 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCcE--EEeCCCCccccCCCCccEEEecC-
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGADL--AIDYTKDNFEDLPEKFDVVYDAI- 304 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~~--vi~~~~~~~~~~~~~~D~vid~~- 304 (392)
.|++||=+| + |.|..++.+++...+++++.++.+++..+.+ ++.|.+. ++..+-.++ ...+.+|+|+-..
T Consensus 42 ~~~~vLDiG-c-GtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~~-~~~~~fD~I~s~~~ 118 (181)
T TIGR00138 42 DGKKVIDIG-S-GAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAEDF-QHEEQFDVITSRAL 118 (181)
T ss_pred CCCeEEEec-C-CCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchhhc-cccCCccEEEehhh
Confidence 388999887 3 3467777777652246788899888766554 3455432 222222222 1235799888542
Q ss_pred cc----HHHHHHhcccCCeEEEE
Q 016265 305 GQ----CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 305 G~----~~~~~~~l~~~G~iv~~ 323 (392)
.. ++.+.++|++||+++..
T Consensus 119 ~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 119 ASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred hCHHHHHHHHHHhcCCCCEEEEE
Confidence 22 36678889999998865
No 464
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=92.27 E-value=0.97 Score=41.22 Aligned_cols=95 Identities=17% Similarity=0.194 Sum_probs=60.0
Q ss_pred hcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHH----hcCCcEEEeCCCCcc----ccC----
Q 016265 227 RTGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLK----SLGADLAIDYTKDNF----EDL---- 293 (392)
Q Consensus 227 ~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~----~~G~~~vi~~~~~~~----~~~---- 293 (392)
..+..++++||=+| .+.|..++.+|+.+. +.+++.++.+++..+.++ +.|.+.-+.....+. .++
T Consensus 63 l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~ 140 (234)
T PLN02781 63 LVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNND 140 (234)
T ss_pred HHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCC
Confidence 34556678999987 356777777777643 357888888888777664 345432222211111 111
Q ss_pred -CCCccEEEecCc------cHHHHHHhcccCCeEEEE
Q 016265 294 -PEKFDVVYDAIG------QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 294 -~~~~D~vid~~G------~~~~~~~~l~~~G~iv~~ 323 (392)
.+.||+||--.. -++.+++++++||.++.-
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 347999884432 257889999999988753
No 465
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=92.23 E-value=0.36 Score=46.29 Aligned_cols=73 Identities=18% Similarity=0.138 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcC--CeEEEEeCCcccHHHH-HhcCC-c-EEE--eCCCC-ccccCCCCccEEEec
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFG--ASRVAATSSTRNLEFL-KSLGA-D-LAI--DYTKD-NFEDLPEKFDVVYDA 303 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G--~~vv~~~~~~~~~~~~-~~~G~-~-~vi--~~~~~-~~~~~~~~~D~vid~ 303 (392)
.|.+|||+||+|.+|...+..+... | .+|++.+++..+...+ +.+.. . .++ |..+. .+.+..+++|+||.+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~-g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLEN-YNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHh-CCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 3678999999999999888766553 4 5777777665544333 22321 1 122 32221 122233568999998
Q ss_pred Cc
Q 016265 304 IG 305 (392)
Q Consensus 304 ~G 305 (392)
.|
T Consensus 82 Ag 83 (324)
T TIGR03589 82 AA 83 (324)
T ss_pred cc
Confidence 76
No 466
>PRK05599 hypothetical protein; Provisional
Probab=92.20 E-value=0.58 Score=42.73 Aligned_cols=69 Identities=23% Similarity=0.330 Sum_probs=44.9
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH----HhcCCc--EEE--eCCCCc-cc-------cCCCCcc
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL----KSLGAD--LAI--DYTKDN-FE-------DLPEKFD 298 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~----~~~G~~--~vi--~~~~~~-~~-------~~~~~~D 298 (392)
+++|+||++++|.+.+.... .|.+|+++.+++++++.+ ++.|.+ .++ |..+.. .. +..+++|
T Consensus 2 ~vlItGas~GIG~aia~~l~--~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC--HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 68999999999999877654 389999998887776544 333432 222 322211 11 1134689
Q ss_pred EEEecCc
Q 016265 299 VVYDAIG 305 (392)
Q Consensus 299 ~vid~~G 305 (392)
+++.+.|
T Consensus 80 ~lv~nag 86 (246)
T PRK05599 80 LAVVAFG 86 (246)
T ss_pred EEEEecC
Confidence 9998876
No 467
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=92.20 E-value=0.33 Score=44.24 Aligned_cols=42 Identities=21% Similarity=0.308 Sum_probs=34.8
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHH
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLE 272 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~ 272 (392)
..++.+|+|+|++|++|...++.+.. .|++|++++++.++.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~-~G~~Vi~~~r~~~~~~ 50 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYAR-HGATVILLGRTEEKLE 50 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHH-CCCcEEEEeCCHHHHH
Confidence 45788999999999999998887766 4999999988776543
No 468
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=92.18 E-value=0.79 Score=43.22 Aligned_cols=72 Identities=13% Similarity=0.212 Sum_probs=41.2
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcc---cHHH-HHhcCCc----E-EEeCCCC-ccccCCCCccEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTR---NLEF-LKSLGAD----L-AIDYTKD-NFEDLPEKFDVV 300 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~---~~~~-~~~~G~~----~-vi~~~~~-~~~~~~~~~D~v 300 (392)
.+.+++|+| +|+.+.+++..+.. .|+ ++.++.++++ |.+. +++++.. . +....+. .+.+....+|+|
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~-~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv 200 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAI-EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 200 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHH-CCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence 567999998 78889876665544 376 5667777643 4333 3344321 1 1111111 122233578999
Q ss_pred EecCc
Q 016265 301 YDAIG 305 (392)
Q Consensus 301 id~~G 305 (392)
|+|+.
T Consensus 201 INaTp 205 (288)
T PRK12749 201 TNGTK 205 (288)
T ss_pred EECCC
Confidence 99974
No 469
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=92.18 E-value=0.2 Score=47.63 Aligned_cols=70 Identities=19% Similarity=0.263 Sum_probs=46.7
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE-EeCCC-CccccCCCCccEEEecCc
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA-IDYTK-DNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v-i~~~~-~~~~~~~~~~D~vid~~G 305 (392)
+|+|+||+|.+|...++.+.. .|.+|+++++++++...+.+.+...+ .|..+ ..+.+..+++|+||++.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLE-QGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHH-CCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 689999999999998887776 48999999887665443333343322 13322 123333457899998864
No 470
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.17 E-value=0.77 Score=43.57 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.|.+++|+||+|++|...++.... .|++|++.+..
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~-~Ga~Vv~~~~~ 45 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLAR-LGATVVVNDVA 45 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEecCC
Confidence 478999999999999987776655 49998888763
No 471
>PRK07578 short chain dehydrogenase; Provisional
Probab=92.15 E-value=1.1 Score=39.19 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=24.8
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSST 268 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~ 268 (392)
+++|+||+|++|...+..... . .+++++.++.
T Consensus 2 ~vlItGas~giG~~la~~l~~-~-~~vi~~~r~~ 33 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSK-R-HEVITAGRSS 33 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHh-c-CcEEEEecCC
Confidence 689999999999987776655 3 6777777654
No 472
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.13 E-value=0.78 Score=43.01 Aligned_cols=95 Identities=26% Similarity=0.294 Sum_probs=66.0
Q ss_pred ccchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
.+||........|+..++ -.|.+|+|.|.+.-+|.=.+.++.. .++.|.++...... ..
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~-~~atVt~chs~t~~-------------------l~ 196 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLN-ENATVTYCHSKTKN-------------------LA 196 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHH-CCCEEEEEeCCchh-------------------HH
Confidence 346665555666666654 4799999999999999998888877 58988876543221 22
Q ss_pred cCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCCC
Q 016265 292 DLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~~ 327 (392)
+..+..|+||-++|... ---+.+++|..++.+|...
T Consensus 197 ~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 197 ELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccc
Confidence 23346799999998421 2234578999999988654
No 473
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=92.05 E-value=0.97 Score=39.79 Aligned_cols=108 Identities=22% Similarity=0.213 Sum_probs=70.6
Q ss_pred ccchhHHHHHHHHHhcCC----------CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE
Q 016265 213 GLPLAIETAYEGLERTGF----------SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA 282 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~----------~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v 282 (392)
.+||.....+..|+..++ -.|.+|+|+|-+.-+|.=.+.++.. .|+.|.+++.+.-.. +. ..+ .
T Consensus 32 ~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~-~~AtVti~~~~~~~~-~~-~~~-~-- 105 (197)
T cd01079 32 ILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLAN-DGARVYSVDINGIQV-FT-RGE-S-- 105 (197)
T ss_pred ccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHH-CCCEEEEEecCcccc-cc-ccc-c--
Confidence 356666556666665543 5799999999999999998888877 599998885432111 00 000 0
Q ss_pred EeCCC---Cc----cccCCCCccEEEecCccHH--HHHHhcccCCeEEEEcCC
Q 016265 283 IDYTK---DN----FEDLPEKFDVVYDAIGQCD--RAVKAIKEGGTVVALTGA 326 (392)
Q Consensus 283 i~~~~---~~----~~~~~~~~D~vid~~G~~~--~~~~~l~~~G~iv~~g~~ 326 (392)
+.... .+ ..+..+..|+||-++|..+ ---+.+++|..++.+|..
T Consensus 106 ~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 106 IRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASI 158 (197)
T ss_pred cccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence 01110 01 3344568899999999533 345689999999998854
No 474
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.05 E-value=0.82 Score=42.88 Aligned_cols=95 Identities=23% Similarity=0.252 Sum_probs=66.2
Q ss_pred ccchhHHHHHHHHHhcCCC-CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGFS-AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~~-~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
.+||.....+.-|+..++. .|.+|+|+|.+.-+|.=.+.++.. .++.|.++-+.... ..
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~-~~aTVtichs~T~~-------------------l~ 193 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLR-EDATVTLAHSKTQD-------------------LP 193 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHH-CCCEEEEeCCCCCC-------------------HH
Confidence 3466655556666666654 699999999999999998888877 48877766443222 22
Q ss_pred cCCCCccEEEecCccHH-HHHHhcccCCeEEEEcCCC
Q 016265 292 DLPEKFDVVYDAIGQCD-RAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~~-~~~~~l~~~G~iv~~g~~~ 327 (392)
+..+..|+|+-++|... .--+.+++|..++.+|...
T Consensus 194 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 194 AVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence 33446799999998321 2345688999999988654
No 475
>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II. All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's.
Probab=92.04 E-value=1.8 Score=41.68 Aligned_cols=93 Identities=24% Similarity=0.171 Sum_probs=55.3
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC-CcccH-HHHHhcCCcEEEeCCC-------------CccccCCCCccEE
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATS-STRNL-EFLKSLGADLAIDYTK-------------DNFEDLPEKFDVV 300 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~-~~~~~-~~~~~~G~~~vi~~~~-------------~~~~~~~~~~D~v 300 (392)
|.|.| .|.+|...+......-+.+++.+.. .+++. .+++.+|.+.+..... .++.++..++|+|
T Consensus 1 VaInG-~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~lgyds~~~~~~~~~~~~~~~l~v~g~~eeLl~~vDiV 79 (333)
T TIGR01546 1 VGVNG-YGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKELGIPVYAASEEFIPRFEEAGIEVAGTLEDLLEKVDIV 79 (333)
T ss_pred CEEEC-CcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHhCCCEEeecCCcceEeccCceEecCCHHHHhhcCCEE
Confidence 56887 9999998777765434567776644 33333 3445677665431111 1233344679999
Q ss_pred EecCcc---HHHHHHhcccCCeEEEEcCCCCC
Q 016265 301 YDAIGQ---CDRAVKAIKEGGTVVALTGAVTP 329 (392)
Q Consensus 301 id~~G~---~~~~~~~l~~~G~iv~~g~~~~~ 329 (392)
++|++. ....-..++.|-+-+.++++...
T Consensus 80 ve~Tp~~~~~~na~~~~~~GakaVl~~~p~~~ 111 (333)
T TIGR01546 80 VDATPGGIGAKNKPLYEKAGVKAIFQGGEKAE 111 (333)
T ss_pred EECCCCCCChhhHHHHHhCCcCEEEECCCCCC
Confidence 999983 33344445555566777776543
No 476
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=92.02 E-value=0.9 Score=42.87 Aligned_cols=95 Identities=28% Similarity=0.266 Sum_probs=66.1
Q ss_pred ccchhHHHHHHHHHhcCC-CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccc
Q 016265 213 GLPLAIETAYEGLERTGF-SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFE 291 (392)
Q Consensus 213 ~l~~~~~ta~~al~~~~~-~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~ 291 (392)
.+||.....+.-|+..++ -.|.+|+|+|-+.-+|.=.+.++.. .++.|.++-..... ..
T Consensus 146 ~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~-~~ATVtvchs~T~n-------------------l~ 205 (299)
T PLN02516 146 FLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLK-ADATVTVVHSRTPD-------------------PE 205 (299)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHH-CCCEEEEeCCCCCC-------------------HH
Confidence 456666556666665543 3599999999999999998888877 48877777543222 22
Q ss_pred cCCCCccEEEecCccH-HHHHHhcccCCeEEEEcCCC
Q 016265 292 DLPEKFDVVYDAIGQC-DRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~~~~~D~vid~~G~~-~~~~~~l~~~G~iv~~g~~~ 327 (392)
+..+..|+++-++|.. ----+.+++|..++.+|...
T Consensus 206 ~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 206 SIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNA 242 (299)
T ss_pred HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccc
Confidence 3345679999999842 12245789999999988654
No 477
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=92.01 E-value=0.31 Score=45.01 Aligned_cols=64 Identities=17% Similarity=0.181 Sum_probs=44.8
Q ss_pred EEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEEEeCCCCccccCCC-CccEEEecCc
Q 016265 236 ILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPE-KFDVVYDAIG 305 (392)
Q Consensus 236 VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~vi~~~~~~~~~~~~-~~D~vid~~G 305 (392)
|+|.||+|-||...++..+. .|-.++++++++.+.+........ ..+.+.+... ++|+||+-.|
T Consensus 1 IliTGgTGlIG~~L~~~L~~-~gh~v~iltR~~~~~~~~~~~~v~-----~~~~~~~~~~~~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLRK-GGHQVTILTRRPPKASQNLHPNVT-----LWEGLADALTLGIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHHh-CCCeEEEEEcCCcchhhhcCcccc-----ccchhhhcccCCCCEEEECCC
Confidence 68999999999999998887 588999999988776543222111 1112222222 7999999888
No 478
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=91.99 E-value=0.75 Score=42.24 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST 268 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~ 268 (392)
.+.+++|+||+|++|...++.... .|++++++.++.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~-~G~~vvi~~~~~ 41 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGK-EKAKVVINYRSD 41 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 578999999999999998887766 599888876643
No 479
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.99 E-value=0.74 Score=42.37 Aligned_cols=35 Identities=29% Similarity=0.310 Sum_probs=28.4
Q ss_pred CCCeEEEEcC--CCcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNG--SGGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga--~G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.|++++|+|| ++++|.+.++.... .|++|+++.++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~-~G~~v~l~~r~ 42 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQE-QGAEVVLTGFG 42 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHH-CCCEEEEecCc
Confidence 4689999998 79999998776655 49998888764
No 480
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=91.98 E-value=1.3 Score=39.97 Aligned_cols=94 Identities=23% Similarity=0.333 Sum_probs=64.2
Q ss_pred cCCCCCCeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEeCCcccHHHHH----hcCCcEEEeCCC-Cc----ccc-CCCC
Q 016265 228 TGFSAGKSILVLNGSGGVGSLVIQLAKQVF-GASRVAATSSTRNLEFLK----SLGADLAIDYTK-DN----FED-LPEK 296 (392)
Q Consensus 228 ~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~~~~~~~~~~~----~~G~~~vi~~~~-~~----~~~-~~~~ 296 (392)
++.....+||=+| ..+|..++++|..+. ..+++.++.++++.+.++ +.|.+..+..-. .+ +.+ ..+.
T Consensus 55 ~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~ 132 (219)
T COG4122 55 ARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGS 132 (219)
T ss_pred HHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCC
Confidence 3455778898887 567999999998864 356777788888877764 467665332111 11 122 2467
Q ss_pred ccEEE-ecCc-----cHHHHHHhcccCCeEEEE
Q 016265 297 FDVVY-DAIG-----QCDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 297 ~D~vi-d~~G-----~~~~~~~~l~~~G~iv~~ 323 (392)
||+|| |+-- -++.++++|++||-+|.=
T Consensus 133 fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 133 FDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred ccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 99887 4532 268999999999998754
No 481
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=91.98 E-value=0.65 Score=42.68 Aligned_cols=93 Identities=16% Similarity=0.251 Sum_probs=59.0
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHh--cCCeEEEEeCCcccHHHHHh----cCCcEEEeCCCCccccC-CCCccEEEe
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQV--FGASRVAATSSTRNLEFLKS----LGADLAIDYTKDNFEDL-PEKFDVVYD 302 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~--~G~~vv~~~~~~~~~~~~~~----~G~~~vi~~~~~~~~~~-~~~~D~vid 302 (392)
+.++.+||-+| +|. |..+..+++.+ .+++++.++.+++-++.+++ .|...-++....++.+. ...+|+++.
T Consensus 54 ~~~~~~vLDlG-cGt-G~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~vv~ 131 (247)
T PRK15451 54 VQPGTQVYDLG-CSL-GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVL 131 (247)
T ss_pred CCCCCEEEEEc-ccC-CHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeCChhhCCCCCCCEEeh
Confidence 56888999998 543 77777777632 36789999999887777654 23221122112222222 235788775
Q ss_pred cCc-----------cHHHHHHhcccCCeEEEEc
Q 016265 303 AIG-----------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 303 ~~G-----------~~~~~~~~l~~~G~iv~~g 324 (392)
... .+..+.+.|+|||.++...
T Consensus 132 ~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e 164 (247)
T PRK15451 132 NFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 164 (247)
T ss_pred hhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 422 1478888999999998764
No 482
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=91.93 E-value=0.69 Score=45.16 Aligned_cols=89 Identities=20% Similarity=0.247 Sum_probs=57.7
Q ss_pred CeEEEEcCCCcHHHHHHHHHHHhc-CCeEEEEe--CCcccH-HHHHhcCCcEEEeCCCCcc-------------------
Q 016265 234 KSILVLNGSGGVGSLVIQLAKQVF-GASRVAAT--SSTRNL-EFLKSLGADLAIDYTKDNF------------------- 290 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~aiqlak~~~-G~~vv~~~--~~~~~~-~~~~~~G~~~vi~~~~~~~------------------- 290 (392)
.+|.|+|++|.+|..++.+.+... ..++++++ .+.+++ +.+++++...++-.++...
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 479999999999999999887621 35666665 233343 4556788776654432211
Q ss_pred --ccC--CCCccEEEecCc---cHHHHHHhcccCCeEEE
Q 016265 291 --EDL--PEKFDVVYDAIG---QCDRAVKAIKEGGTVVA 322 (392)
Q Consensus 291 --~~~--~~~~D~vid~~G---~~~~~~~~l~~~G~iv~ 322 (392)
.++ ...+|+|+++++ ++...+.+++.|-++.+
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 000 125899999964 46778888877766543
No 483
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=91.91 E-value=0.52 Score=49.81 Aligned_cols=73 Identities=21% Similarity=0.381 Sum_probs=51.1
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc---------------------cHHHHHhcCCcEEEeCCC--
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR---------------------NLEFLKSLGADLAIDYTK-- 287 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~---------------------~~~~~~~~G~~~vi~~~~-- 287 (392)
..+++|+|+| +|+.|+.++..+.. .|.+|++++..+. ..+.++++|.+..++..-
T Consensus 191 ~~~k~VaIIG-aGpAGl~aA~~La~-~G~~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~ 268 (652)
T PRK12814 191 KSGKKVAIIG-AGPAGLTAAYYLLR-KGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGR 268 (652)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHH-CCCcEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccC
Confidence 4578999998 99999999998887 5999988876532 134556788765554321
Q ss_pred -CccccCCCCccEEEecCc
Q 016265 288 -DNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 288 -~~~~~~~~~~D~vid~~G 305 (392)
....+....+|.||-++|
T Consensus 269 dv~~~~~~~~~DaVilAtG 287 (652)
T PRK12814 269 DITLEELQKEFDAVLLAVG 287 (652)
T ss_pred ccCHHHHHhhcCEEEEEcC
Confidence 112222335899999888
No 484
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=91.91 E-value=0.88 Score=41.04 Aligned_cols=37 Identities=30% Similarity=0.380 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTR 269 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~ 269 (392)
.+.+++|+|++|++|...+..+.. .|++++++.++..
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~-~G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAA-QGANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCch
Confidence 357899999999999999988877 5999877776544
No 485
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=91.90 E-value=0.52 Score=44.73 Aligned_cols=73 Identities=21% Similarity=0.296 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHH---Hhc-CC--c-EEE--eCCC-CccccCCCCccEEE
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFL---KSL-GA--D-LAI--DYTK-DNFEDLPEKFDVVY 301 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~---~~~-G~--~-~vi--~~~~-~~~~~~~~~~D~vi 301 (392)
.|.+|||+||+|.+|...+..+.. .|.+|++++++..+.... ..+ +. . ..+ |..+ ..+.+..+++|+||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQ-RGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHH-CCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 357899999999999998887776 499998888765543222 111 11 1 122 2211 22333345789999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
.+.+
T Consensus 82 h~A~ 85 (322)
T PLN02662 82 HTAS 85 (322)
T ss_pred EeCC
Confidence 8865
No 486
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.88 E-value=0.68 Score=46.50 Aligned_cols=69 Identities=28% Similarity=0.413 Sum_probs=46.1
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCc-ccH----HHHHhcCCcEEEeCCCCccccCCCCccEEEecCc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSST-RNL----EFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIG 305 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~-~~~----~~~~~~G~~~vi~~~~~~~~~~~~~~D~vid~~G 305 (392)
.+.+|+|+| +|.+|+.++..+.. .|++|++.+... +.. +.+.+.|..... .+..+ +..+++|+||.++|
T Consensus 4 ~~k~v~iiG-~g~~G~~~A~~l~~-~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVG-AGVSGLALAKFLKK-LGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE--EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch--hHhhcCCEEEECCC
Confidence 468999998 66799998888877 599999888754 222 334455654322 11111 23356899999988
No 487
>PRK09134 short chain dehydrogenase; Provisional
Probab=91.87 E-value=0.89 Score=41.68 Aligned_cols=73 Identities=15% Similarity=0.205 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC-cccHHHH----HhcCCcE-EE--eCCCCc-cc----c---CCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS-TRNLEFL----KSLGADL-AI--DYTKDN-FE----D---LPE 295 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~-~~~~~~~----~~~G~~~-vi--~~~~~~-~~----~---~~~ 295 (392)
.+.+++|+||+|++|...++.+.. .|++++++++. .++.+.+ +..+... .+ |..+.. .. + ...
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAA-HGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999987776655 49988877653 3343322 2234321 22 332211 11 1 124
Q ss_pred CccEEEecCc
Q 016265 296 KFDVVYDAIG 305 (392)
Q Consensus 296 ~~D~vid~~G 305 (392)
++|++|.+.|
T Consensus 87 ~iD~vi~~ag 96 (258)
T PRK09134 87 PITLLVNNAS 96 (258)
T ss_pred CCCEEEECCc
Confidence 6899999876
No 488
>PLN02427 UDP-apiose/xylose synthase
Probab=91.87 E-value=0.59 Score=45.87 Aligned_cols=75 Identities=12% Similarity=0.065 Sum_probs=46.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCC------cEEE--eCCC-CccccCCCCccEEE
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGA------DLAI--DYTK-DNFEDLPEKFDVVY 301 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~------~~vi--~~~~-~~~~~~~~~~D~vi 301 (392)
-+..+|||+||+|-+|...++.+....|.+|++++++.++...+...+. -..+ |..+ ..+.+..+++|+||
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi 91 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI 91 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence 3446799999999999988877665325788888876665554433321 1112 2221 22333345799999
Q ss_pred ecCc
Q 016265 302 DAIG 305 (392)
Q Consensus 302 d~~G 305 (392)
.+.+
T Consensus 92 HlAa 95 (386)
T PLN02427 92 NLAA 95 (386)
T ss_pred Eccc
Confidence 9875
No 489
>PRK09135 pteridine reductase; Provisional
Probab=91.87 E-value=0.91 Score=41.05 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSS 267 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~ 267 (392)
.+.+|||+||+|++|...+..... .|+++++++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~-~g~~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHA-AGYRVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCC
Confidence 457899999999999987777666 49999988875
No 490
>PRK08955 glyceraldehyde-3-phosphate dehydrogenase; Validated
Probab=91.85 E-value=2 Score=41.41 Aligned_cols=92 Identities=21% Similarity=0.207 Sum_probs=55.9
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC---CcccHHHHHhc----C---Cc-------EEEeCCCC------ccc
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATS---STRNLEFLKSL----G---AD-------LAIDYTKD------NFE 291 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~---~~~~~~~~~~~----G---~~-------~vi~~~~~------~~~ 291 (392)
+|.|.| .|-+|++.++.+......+++.+.. +.+.+.++-++ | .+ ..++.+.- +..
T Consensus 4 kigInG-~GRiGr~v~r~~~~~~~~~ivaind~~~~~~~~a~ll~yDs~~g~~~~~v~~~g~~l~~~g~~i~v~~~~~~~ 82 (334)
T PRK08955 4 KVGING-FGRIGRLALRAAWDWPELEFVQINDPAGDAATLAHLLEFDSVHGRWHHEVTAEGDAIVINGKRIRTTQNKAIA 82 (334)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCcEEEEecCCCCCHHHHHHHhhhhccCCCCCCCEEEcCCEEEECCEEEEEEecCChh
Confidence 689998 5999999999877533455555543 23344444332 2 11 11111110 111
Q ss_pred cC-CCCccEEEecCcc---HHHHHHhcccCCeEEEEcCCC
Q 016265 292 DL-PEKFDVVYDAIGQ---CDRAVKAIKEGGTVVALTGAV 327 (392)
Q Consensus 292 ~~-~~~~D~vid~~G~---~~~~~~~l~~~G~iv~~g~~~ 327 (392)
+. =+++|+||+|+|. .+.+...+..|.+.|.++.+.
T Consensus 83 ~~~w~gvDiVle~tG~~~s~~~a~~hl~aGak~V~iSap~ 122 (334)
T PRK08955 83 DTDWSGCDVVIEASGVMKTKALLQAYLDQGVKRVVVTAPV 122 (334)
T ss_pred hCCccCCCEEEEccchhhcHHHHHHHHHCCCEEEEECCCC
Confidence 11 1289999999994 467778888888888887764
No 491
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=91.83 E-value=0.39 Score=46.42 Aligned_cols=38 Identities=24% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCccc
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRN 270 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~ 270 (392)
.|.+|||+||+|.+|...++.+.. .|.+|++++++...
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~-~G~~V~~~~r~~~~ 40 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLE-LGAEVYGYSLDPPT 40 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHH-CCCEEEEEeCCCcc
Confidence 468999999999999999888877 49999988875543
No 492
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=91.82 E-value=0.69 Score=43.75 Aligned_cols=88 Identities=17% Similarity=0.244 Sum_probs=52.4
Q ss_pred CeEEEEcCCCcHHHHHH-HHHHHhcCCeEEEEeC-Ccc--cHHHHHhcCCcEEEeCCCCcccc-CCCCccEEEecCcc--
Q 016265 234 KSILVLNGSGGVGSLVI-QLAKQVFGASRVAATS-STR--NLEFLKSLGADLAIDYTKDNFED-LPEKFDVVYDAIGQ-- 306 (392)
Q Consensus 234 ~~VlI~Ga~G~vG~~ai-qlak~~~G~~vv~~~~-~~~--~~~~~~~~G~~~vi~~~~~~~~~-~~~~~D~vid~~G~-- 306 (392)
-+|.|+| +|.+|...+ .+.+ ..+.+++.+.. +++ .++.++++|....++.-+..+.. .-.++|+||++++.
T Consensus 5 lrVAIIG-tG~IGt~hm~~l~~-~~~velvAVvdid~es~gla~A~~~Gi~~~~~~ie~LL~~~~~~dIDiVf~AT~a~~ 82 (302)
T PRK08300 5 LKVAIIG-SGNIGTDLMIKILR-SEHLEPGAMVGIDPESDGLARARRLGVATSAEGIDGLLAMPEFDDIDIVFDATSAGA 82 (302)
T ss_pred CeEEEEc-CcHHHHHHHHHHhc-CCCcEEEEEEeCChhhHHHHHHHHcCCCcccCCHHHHHhCcCCCCCCEEEECCCHHH
Confidence 4689998 999998744 4444 34677776654 333 34667888865433211111111 01469999999983
Q ss_pred -HHHHHHhcccCCeEEEE
Q 016265 307 -CDRAVKAIKEGGTVVAL 323 (392)
Q Consensus 307 -~~~~~~~l~~~G~iv~~ 323 (392)
.+.+.+++..|-.+++.
T Consensus 83 H~e~a~~a~eaGk~VID~ 100 (302)
T PRK08300 83 HVRHAAKLREAGIRAIDL 100 (302)
T ss_pred HHHHHHHHHHcCCeEEEC
Confidence 45555565555555554
No 493
>PRK14982 acyl-ACP reductase; Provisional
Probab=91.81 E-value=0.38 Score=46.33 Aligned_cols=91 Identities=15% Similarity=0.188 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHH-hcCCcEEEeCCCCccccCCCCccEEEecCccHH
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLK-SLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCD 308 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~-~~G~~~vi~~~~~~~~~~~~~~D~vid~~G~~~ 308 (392)
-.+.+|+|+||+|.+|..++..+....|. +++++.++.+++..+. +++...+. ++.+...++|+|+.+++...
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEALPEADIVVWVASMPK 227 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHHHccCCEEEECCcCCc
Confidence 36789999998899999887776432354 6667777777766653 44321111 23334457899999887421
Q ss_pred H---HHHhcccCCeEEEEcCC
Q 016265 309 R---AVKAIKEGGTVVALTGA 326 (392)
Q Consensus 309 ~---~~~~l~~~G~iv~~g~~ 326 (392)
. -...++++-.+++++.+
T Consensus 228 ~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 228 GVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred CCcCCHHHhCCCeEEEEecCC
Confidence 1 11345666666777654
No 494
>PLN02366 spermidine synthase
Probab=91.80 E-value=0.84 Score=43.49 Aligned_cols=91 Identities=15% Similarity=0.222 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHHHhcCC-------c---EEEeCCCCcc-ccC-CCCc
Q 016265 231 SAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFLKSLGA-------D---LAIDYTKDNF-EDL-PEKF 297 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~~~~G~-------~---~vi~~~~~~~-~~~-~~~~ 297 (392)
...++|||+| +|. |.++..++++ .+. ++.+++.+++-.+.++++-. + .++..+...+ .+. .+.+
T Consensus 90 ~~pkrVLiIG-gG~-G~~~rellk~-~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVG-GGD-GGVLREIARH-SSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEc-CCc-cHHHHHHHhC-CCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCC
Confidence 4568999998 444 6677888886 454 56677777766666665311 1 0111111111 222 3469
Q ss_pred cEEEec-Cc------------cHHHHHHhcccCCeEEEEc
Q 016265 298 DVVYDA-IG------------QCDRAVKAIKEGGTVVALT 324 (392)
Q Consensus 298 D~vid~-~G------------~~~~~~~~l~~~G~iv~~g 324 (392)
|+||-- .. -++.+.++|+++|.++.-+
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 998842 21 1467888999999997654
No 495
>PRK12744 short chain dehydrogenase; Provisional
Probab=91.79 E-value=0.96 Score=41.44 Aligned_cols=34 Identities=29% Similarity=0.435 Sum_probs=27.9
Q ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC
Q 016265 232 AGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATS 266 (392)
Q Consensus 232 ~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~ 266 (392)
.+.+++|+||+|++|...+..... .|++++++..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~-~G~~vv~i~~ 40 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAA-QGAKAVAIHY 40 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHH-CCCcEEEEec
Confidence 467899999999999998887766 5998776654
No 496
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=91.78 E-value=0.81 Score=44.76 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=26.3
Q ss_pred CCCCeEEEEcCCCcHHHH--HHHHHHHhcCCeEEEEeC
Q 016265 231 SAGKSILVLNGSGGVGSL--VIQLAKQVFGASRVAATS 266 (392)
Q Consensus 231 ~~g~~VlI~Ga~G~vG~~--aiqlak~~~G~~vv~~~~ 266 (392)
..|+++||+|+++++|++ .++.+ . .|++++++..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~-~GA~Vi~v~~ 74 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-G-AGADTLGVFF 74 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-H-cCCeEEEEec
Confidence 446899999999999999 34444 4 4998888863
No 497
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=91.76 E-value=0.75 Score=43.65 Aligned_cols=58 Identities=24% Similarity=0.333 Sum_probs=49.5
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeC---CcccHHHHHhcCCcEEEe
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATS---STRNLEFLKSLGADLAID 284 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~---~~~~~~~~~~~G~~~vi~ 284 (392)
....+.||.++||-.-+|-.|...+.++.. .|.+++++.. +.+|+..++++|+..+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~-~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAAL-RGYKCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHH-cCceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 456799999999999899999999999987 5999999875 778889999999876653
No 498
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=91.73 E-value=2.2 Score=41.56 Aligned_cols=98 Identities=31% Similarity=0.372 Sum_probs=61.8
Q ss_pred HhcCCCCCCeEEEEcCCCcHHHHHHHHHHHhc--CCeEEEEeCCcccHHHH----HhcCCcE--EEeCCCCccccC---C
Q 016265 226 ERTGFSAGKSILVLNGSGGVGSLVIQLAKQVF--GASRVAATSSTRNLEFL----KSLGADL--AIDYTKDNFEDL---P 294 (392)
Q Consensus 226 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlak~~~--G~~vv~~~~~~~~~~~~----~~~G~~~--vi~~~~~~~~~~---~ 294 (392)
...+.++|++||=.- +++ |--+.++|..+. |..|++.+.++.|+..+ +++|... +++.+...+.+. .
T Consensus 150 ~~L~p~pge~VlD~c-AAP-GGKTthla~~~~~~~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~~~ 227 (355)
T COG0144 150 LVLDPKPGERVLDLC-AAP-GGKTTHLAELMENEGAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPGG 227 (355)
T ss_pred HHcCCCCcCEEEEEC-CCC-CCHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccccccccccccc
Confidence 456789999887664 333 334455555542 45568888999988766 5688774 444443333222 1
Q ss_pred CCccEEE-e--cCcc----------------------------HHHHHHhcccCCeEEEEcC
Q 016265 295 EKFDVVY-D--AIGQ----------------------------CDRAVKAIKEGGTVVALTG 325 (392)
Q Consensus 295 ~~~D~vi-d--~~G~----------------------------~~~~~~~l~~~G~iv~~g~ 325 (392)
+.||.|+ | |+|. +..+++.+++||++|....
T Consensus 228 ~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYSTC 289 (355)
T COG0144 228 EKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYSTC 289 (355)
T ss_pred CcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence 2488776 4 4541 3578889999999986543
No 499
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=91.72 E-value=1.3 Score=41.77 Aligned_cols=86 Identities=22% Similarity=0.273 Sum_probs=52.6
Q ss_pred eEEEEcCCCcHHHHHHHHHHHhcCCeEEEEeCCcccHHHHHhcCCcEE-------EeCC-CCccccCCCCccEEEecCc-
Q 016265 235 SILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLEFLKSLGADLA-------IDYT-KDNFEDLPEKFDVVYDAIG- 305 (392)
Q Consensus 235 ~VlI~Ga~G~vG~~aiqlak~~~G~~vv~~~~~~~~~~~~~~~G~~~v-------i~~~-~~~~~~~~~~~D~vid~~G- 305 (392)
+|+|+| +|.+|.+.+..+.. .|.+|.++++ +++.+.+++.|.... +... ..+..+..+.+|++|-|+-
T Consensus 2 kI~IiG-~G~iG~~~a~~L~~-~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~ 78 (305)
T PRK12921 2 RIAVVG-AGAVGGTFGGRLLE-AGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKA 78 (305)
T ss_pred eEEEEC-CCHHHHHHHHHHHH-CCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecc
Confidence 589998 99999976666655 4888888888 777777777663211 0000 0112222367899999976
Q ss_pred -cHHHHHHhc----ccCCeEEEE
Q 016265 306 -QCDRAVKAI----KEGGTVVAL 323 (392)
Q Consensus 306 -~~~~~~~~l----~~~G~iv~~ 323 (392)
..+.+++.+ .++..++.+
T Consensus 79 ~~~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 79 YQLDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred cCHHHHHHHHHhhcCCCCEEEEe
Confidence 344444443 444445544
No 500
>PRK06141 ornithine cyclodeaminase; Validated
Probab=91.71 E-value=1.1 Score=42.75 Aligned_cols=93 Identities=17% Similarity=0.142 Sum_probs=56.3
Q ss_pred CCCCCeEEEEcCCCcHHHHHHHHHHHhcCC-eEEEEeCCcccHHHH-Hhc---CCcEEEeCCCCccccCCCCccEEEecC
Q 016265 230 FSAGKSILVLNGSGGVGSLVIQLAKQVFGA-SRVAATSSTRNLEFL-KSL---GADLAIDYTKDNFEDLPEKFDVVYDAI 304 (392)
Q Consensus 230 ~~~g~~VlI~Ga~G~vG~~aiqlak~~~G~-~vv~~~~~~~~~~~~-~~~---G~~~vi~~~~~~~~~~~~~~D~vid~~ 304 (392)
-....+|+|+| +|.+|...+......++. ++.+..+++++.+.+ +++ |..... . .+..+..+++|+|+.|+
T Consensus 122 ~~~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~--~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 122 RKDASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V--TDLEAAVRQADIISCAT 197 (314)
T ss_pred CCCCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e--CCHHHHHhcCCEEEEee
Confidence 35578899998 999999987644433454 566777887775544 343 322111 1 12233346899999988
Q ss_pred ccHHHH--HHhcccCCeEEEEcCC
Q 016265 305 GQCDRA--VKAIKEGGTVVALTGA 326 (392)
Q Consensus 305 G~~~~~--~~~l~~~G~iv~~g~~ 326 (392)
++-+-. -+.+++|-.+..+|..
T Consensus 198 ~s~~pvl~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 198 LSTEPLVRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred CCCCCEecHHHcCCCCEEEeeCCC
Confidence 742111 2567887755555543
Done!