Query 016270
Match_columns 392
No_of_seqs 170 out of 209
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 10:46:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016270.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016270hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1omza_ c.68.1.15 (A:) Alpha-1 64.1 29 0.0021 26.9 11.1 100 124-245 12-114 (265)
2 d1kvja_ d.58.17.1 (A:) Menkes 50.4 1.4 0.0001 32.0 -0.2 48 288-335 12-68 (79)
3 d1udxa3 d.242.1.1 (A:341-416) 48.8 3.6 0.00026 30.2 1.9 22 202-223 48-69 (76)
4 d2aw0a_ d.58.17.1 (A:) Menkes 48.0 1.5 0.00011 31.2 -0.4 48 288-335 7-63 (72)
5 d1cpza_ d.58.17.1 (A:) Copper 45.8 2 0.00015 30.2 -0.0 46 290-335 6-60 (68)
6 d1osda_ d.58.17.1 (A:) Mercuri 43.8 1.8 0.00013 30.8 -0.5 48 288-335 7-63 (72)
7 d1q8la_ d.58.17.1 (A:) Menkes 43.5 3 0.00022 30.6 0.7 50 288-337 13-71 (84)
8 d1jixa_ c.87.1.1 (A:) beta-Glu 43.4 10 0.00074 33.2 4.3 44 141-184 59-102 (351)
9 d2qifa1 d.58.17.1 (A:1-69) Cop 42.9 1.7 0.00012 30.7 -0.8 47 289-335 7-62 (69)
10 d1sb6a_ d.58.17.1 (A:) Copper 41.5 4.4 0.00032 28.1 1.3 48 288-335 5-58 (64)
11 d2bo4a1 c.68.1.18 (A:2-382) Ma 39.7 93 0.0068 28.5 11.0 106 120-234 4-113 (381)
12 d2ggpb1 d.58.17.1 (B:1-72) Cop 37.1 4 0.00029 28.9 0.4 49 288-336 6-62 (72)
13 d1p6ta1 d.58.17.1 (A:1-72) Pot 35.2 2.1 0.00015 30.3 -1.4 48 288-335 10-66 (72)
14 d1edmb_ g.3.11.1 (B:) Factor I 33.9 15 0.0011 23.2 2.9 20 67-89 20-39 (39)
15 d1cvua2 g.3.11.1 (A:33-73) Pro 33.1 11 0.00078 24.2 2.1 22 67-91 19-41 (41)
16 d2vj3a2 g.3.11.1 (A:453-491) N 28.3 9.7 0.0007 24.3 1.2 19 68-89 19-37 (39)
17 d1wi2a_ b.36.1.1 (A:) PDZ doma 27.7 35 0.0025 25.3 4.7 38 209-250 57-97 (104)
18 d1ll2a_ c.68.1.14 (A:) Glycoge 27.6 17 0.0013 30.7 3.1 86 129-227 21-116 (263)
19 d1xhba2 c.68.1.17 (A:95-422) P 27.1 1.6E+02 0.011 24.7 9.7 94 121-234 28-128 (328)
20 d2i6va1 b.36.1.5 (A:219-305) G 22.6 63 0.0046 23.0 5.2 28 207-234 33-60 (87)
21 d2vj3a1 g.3.11.1 (A:411-452) N 21.3 15 0.0011 23.4 1.1 17 70-89 25-41 (42)
22 d1ak2a2 g.41.2.1 (A:147-176) M 21.3 18 0.0013 21.9 1.4 17 11-28 10-26 (30)
No 1
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=64.12 E-value=29 Score=26.86 Aligned_cols=100 Identities=12% Similarity=0.155 Sum_probs=55.6
Q ss_pred CChHHHHHHHHHHhc--ccccEEEEEEeCCCccCCCccccchhhhhhcccCCCCEEEEEeCCccCCCCChhhhHHHHHHH
Q 016270 124 SNELDILTIRWKELY--PYITQFVLLESNSTFTGKPKPLVFSAHRDQFKFVDPRLTYGTIGGRFKKGENPFVEEAYQRVA 201 (392)
Q Consensus 124 ~~ElDlLEIRL~eL~--dvVD~FVIvES~~TftG~pKpL~f~~~~~rF~~~~~KIiy~~l~~~~~~~~~~w~~E~~qRn~ 201 (392)
.||-+.|+-=|+.|. ++.|.-|||-.+.|=. .+ +.-.+.......++++.. +... . ...||+
T Consensus 12 yn~~~~l~~~l~sl~~q~~~~~~iiV~d~~sd~-~~-----~~i~~~~~~~~~~~~~~~-~~~g---~------~~a~n~ 75 (265)
T d1omza_ 12 YNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEK-GP-----EELWNSLGPHPIPVIFKP-QTAN---K------MRNRLQ 75 (265)
T ss_dssp SSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCC-CT-----HHHHHHTCCCSSCEEEEE-CSSC---C------GGGGGS
T ss_pred CCCHHHHHHHHHHHHcCCCcCeEEEEECCCCCc-cH-----HHHHHHhcccceEEEEec-CCCC---c------hhhhhh
Confidence 467778888888876 6777777776553221 11 112223333333333332 1111 0 112331
Q ss_pred HHHHHHHcCCCCCcEEEeeCCCCcCCHHHHHHh-hhcCCCCCceE
Q 016270 202 LDQLLKIAGITDDDLLIMSDVDEIPSRHTINLL-RWCDDIPPVLH 245 (392)
Q Consensus 202 l~~~l~~~~~~~dDliI~SDvDEIP~p~~l~~L-k~cdg~p~~l~ 245 (392)
++ ....+|.|++-|.|.++.|+.|+.+ +.....|....
T Consensus 76 ---~~---~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v 114 (265)
T d1omza_ 76 ---VF---PEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQII 114 (265)
T ss_dssp ---CC---TTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEE
T ss_pred ---hH---HhCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcce
Confidence 11 1248999999999999999999966 45554554433
No 2
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.41 E-value=1.4 Score=32.03 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=32.9
Q ss_pred cCCceeecccCccChhHHHHHHHhccccC--cCC-------ccccCCHHHHHHHHHc
Q 016270 288 LADAGWHCSFCFRHISEFTFKMKAYSHFD--RVR-------FSYFLNHKRIQKVICK 335 (392)
Q Consensus 288 l~~aGWHCS~Cf~~i~~i~~Km~SfSH~d--~~~-------~~~~~d~~~I~~~I~~ 335 (392)
+.-.|.||+.|-..|+..+.++....+.+ +.. .+...+.+.|.+.|.+
T Consensus 12 l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 68 (79)
T d1kvja_ 12 ISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDD 68 (79)
T ss_dssp EEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 45579999999888887777776665443 111 1234788888888775
No 3
>d1udxa3 d.242.1.1 (A:341-416) Obg GTP-binding protein C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=48.80 E-value=3.6 Score=30.18 Aligned_cols=22 Identities=18% Similarity=0.508 Sum_probs=18.2
Q ss_pred HHHHHHHcCCCCCcEEEeeCCC
Q 016270 202 LDQLLKIAGITDDDLLIMSDVD 223 (392)
Q Consensus 202 l~~~l~~~~~~~dDliI~SDvD 223 (392)
+.+.|+++|+++||.|.++|..
T Consensus 48 v~~~L~~~Gak~GD~V~Ig~~e 69 (76)
T d1udxa3 48 VEAALRAKGVRAGDLVRIGGLE 69 (76)
T ss_dssp HHHHHHTTTCCTTCEEEETTEE
T ss_pred hHHHHHHcCCCCCCEEEECCEE
Confidence 4457888999999999999853
No 4
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.00 E-value=1.5 Score=31.19 Aligned_cols=48 Identities=13% Similarity=0.198 Sum_probs=32.3
Q ss_pred cCCceeecccCccChhHHHHHHHhccccCc--C------C-ccccCCHHHHHHHHHc
Q 016270 288 LADAGWHCSFCFRHISEFTFKMKAYSHFDR--V------R-FSYFLNHKRIQKVICK 335 (392)
Q Consensus 288 l~~aGWHCS~Cf~~i~~i~~Km~SfSH~d~--~------~-~~~~~d~~~I~~~I~~ 335 (392)
+.-.|.||+.|-..|+..+.++..-...+- . . .+...+++.|.+.|.+
T Consensus 7 l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 63 (72)
T d2aw0a_ 7 INIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIED 63 (72)
T ss_dssp EEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 445799999999999888888775543321 0 1 2345678888887764
No 5
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=45.77 E-value=2 Score=30.23 Aligned_cols=46 Identities=15% Similarity=0.221 Sum_probs=30.6
Q ss_pred CceeecccCccChhHHHHHHHhccccC--cC------C-ccccCCHHHHHHHHHc
Q 016270 290 DAGWHCSFCFRHISEFTFKMKAYSHFD--RV------R-FSYFLNHKRIQKVICK 335 (392)
Q Consensus 290 ~aGWHCS~Cf~~i~~i~~Km~SfSH~d--~~------~-~~~~~d~~~I~~~I~~ 335 (392)
-.|.||+.|-..|+..+.++..-...+ .. . .+...+++.|.+.|.+
T Consensus 6 V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~ 60 (68)
T d1cpza_ 6 VKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINE 60 (68)
T ss_dssp ESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHT
T ss_pred ECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 369999999888887777776543221 11 1 2345688888888765
No 6
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=43.81 E-value=1.8 Score=30.80 Aligned_cols=48 Identities=19% Similarity=0.206 Sum_probs=30.3
Q ss_pred cCCceeecccCccChhHHHHHHHhccccC--cCC-------ccccCCHHHHHHHHHc
Q 016270 288 LADAGWHCSFCFRHISEFTFKMKAYSHFD--RVR-------FSYFLNHKRIQKVICK 335 (392)
Q Consensus 288 l~~aGWHCS~Cf~~i~~i~~Km~SfSH~d--~~~-------~~~~~d~~~I~~~I~~ 335 (392)
+.-.|+||+.|-..|+..+.++..-...+ +.+ .+.-.+.+.|++.|.+
T Consensus 7 l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~ 63 (72)
T d1osda_ 7 LSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATAD 63 (72)
T ss_dssp EECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHH
T ss_pred EEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 45579999999888776666665443332 111 1234677777777764
No 7
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.50 E-value=3 Score=30.62 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=34.1
Q ss_pred cCCceeecccCccChhHHHHHHHhccccCc--CC-------ccccCCHHHHHHHHHcCC
Q 016270 288 LADAGWHCSFCFRHISEFTFKMKAYSHFDR--VR-------FSYFLNHKRIQKVICKGA 337 (392)
Q Consensus 288 l~~aGWHCS~Cf~~i~~i~~Km~SfSH~d~--~~-------~~~~~d~~~I~~~I~~G~ 337 (392)
+.-.|.||+.|-..|+..+.++..-....- .. .+...+.+.|.+.|.+-.
T Consensus 13 l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~G 71 (84)
T d1q8la_ 13 MKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMG 71 (84)
T ss_dssp EEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTT
T ss_pred EEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhC
Confidence 455799999999988888887766543321 01 234578888888886543
No 8
>d1jixa_ c.87.1.1 (A:) beta-Glucosyltransferase (DNA-modifying) {Bacteriophage T4 [TaxId: 10665]}
Probab=43.41 E-value=10 Score=33.23 Aligned_cols=44 Identities=14% Similarity=0.193 Sum_probs=34.5
Q ss_pred ccEEEEEEeCCCccCCCccccchhhhhhcccCCCCEEEEEeCCc
Q 016270 141 ITQFVLLESNSTFTGKPKPLVFSAHRDQFKFVDPRLTYGTIGGR 184 (392)
Q Consensus 141 VD~FVIvES~~TftG~pKpL~f~~~~~rF~~~~~KIiy~~l~~~ 184 (392)
-|..++|.|...|.|..-.|...+...-.+.|++||.|..-+.+
T Consensus 59 ydrlivvnssinffggkpnlailsaqkfmakykskiyylftdir 102 (351)
T d1jixa_ 59 YDRLIVVNSSINFFGGKPNLAILSAQKFMAKYKSKIYYLFTDIR 102 (351)
T ss_dssp CSEEEEECCCCCCCSSSCCHHHHHHHHHHHHCCSCEEEEECSTT
T ss_pred cceEEEEcceeeecCCCCchhhhhHHHHHHHhhceeEEEEeeec
Confidence 48899999999999987777665544334899999999886643
No 9
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=42.91 E-value=1.7 Score=30.68 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=30.7
Q ss_pred CCceeecccCccChhHHHHHHHhccccC--cCC-------ccccCCHHHHHHHHHc
Q 016270 289 ADAGWHCSFCFRHISEFTFKMKAYSHFD--RVR-------FSYFLNHKRIQKVICK 335 (392)
Q Consensus 289 ~~aGWHCS~Cf~~i~~i~~Km~SfSH~d--~~~-------~~~~~d~~~I~~~I~~ 335 (392)
.-.|+||+.|-..|+..+.++..-...+ ... .++-++.+.|++.|.+
T Consensus 7 ~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 62 (69)
T d2qifa1 7 QVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIED 62 (69)
T ss_dssp EEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 4479999999888887777766543222 111 1234677888887764
No 10
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=41.51 E-value=4.4 Score=28.05 Aligned_cols=48 Identities=13% Similarity=0.203 Sum_probs=32.2
Q ss_pred cCCceeecccCccChhHHHHHHHhccccCcC------CccccCCHHHHHHHHHc
Q 016270 288 LADAGWHCSFCFRHISEFTFKMKAYSHFDRV------RFSYFLNHKRIQKVICK 335 (392)
Q Consensus 288 l~~aGWHCS~Cf~~i~~i~~Km~SfSH~d~~------~~~~~~d~~~I~~~I~~ 335 (392)
+.-.|.||+.|-..|+..+.++..-+..+.. .-..-.+++.|++.|.+
T Consensus 5 l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~ 58 (64)
T d1sb6a_ 5 LTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58 (64)
T ss_dssp EECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHH
T ss_pred EEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHH
Confidence 3457899999999999888888766544311 11223677888877753
No 11
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=39.74 E-value=93 Score=28.51 Aligned_cols=106 Identities=12% Similarity=0.014 Sum_probs=56.0
Q ss_pred EEecCCh---HHHHHHHHHHhcccccEEEEEEeCCCccCCCccccchhhhhhcccCCCCEEEEEeCCccCCCCChhhhHH
Q 016270 120 AVLFSNE---LDILTIRWKELYPYITQFVLLESNSTFTGKPKPLVFSAHRDQFKFVDPRLTYGTIGGRFKKGENPFVEEA 196 (392)
Q Consensus 120 ~f~f~~E---lDlLEIRL~eL~dvVD~FVIvES~~TftG~pKpL~f~~~~~rF~~~~~KIiy~~l~~~~~~~~~~w~~E~ 196 (392)
++.|.|| +-...+|+-.-.+.++..||+....+-|...-.-... +-....+..+...+...... ..--.-.
T Consensus 4 VIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSdDtt~~i~~~~~----~~~~~~~~~v~~~~~~~l~~--~~~GKG~ 77 (381)
T d2bo4a1 4 VFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAP----EISRATGTPVSVRLQERLGT--LRPGKGD 77 (381)
T ss_dssp EEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHH----HHHHHHSCCEEEEECCCCSS--SSSSHHH
T ss_pred EEEcCCCcHHHHHHHHHHHHhCCCeeEEEEEcCCCCCcHHHHHHHhh----hhhccccccchhhhhccccc--ccCCCcH
Confidence 4667776 3344557777889999999998776544321111110 00000111111122211100 0001223
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEeeCCC-CcCCHHHHHHh
Q 016270 197 YQRVALDQLLKIAGITDDDLLIMSDVD-EIPSRHTINLL 234 (392)
Q Consensus 197 ~qRn~l~~~l~~~~~~~dDliI~SDvD-EIP~p~~l~~L 234 (392)
-.+.++..+++. ..+|+|++-|+| .=+.|+.+..|
T Consensus 78 g~~~A~~~g~~~---a~gd~lvflDADl~~~~pe~i~~L 113 (381)
T d2bo4a1 78 GMNTALRYFLEE---TQWERIHFYDADITSFGPDWITKA 113 (381)
T ss_dssp HHHHHHHHHHHH---CCCSEEEECCTTCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHh---CCCCEEEEEcCCcCcCCHHHHHHH
Confidence 445566665543 479999999999 45778877665
No 12
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.10 E-value=4 Score=28.88 Aligned_cols=49 Identities=24% Similarity=0.340 Sum_probs=31.5
Q ss_pred cCCceeecccCccChhHHHHHHHhccccC--c------CCccccCCHHHHHHHHHcC
Q 016270 288 LADAGWHCSFCFRHISEFTFKMKAYSHFD--R------VRFSYFLNHKRIQKVICKG 336 (392)
Q Consensus 288 l~~aGWHCS~Cf~~i~~i~~Km~SfSH~d--~------~~~~~~~d~~~I~~~I~~G 336 (392)
+.-.|.||+.|-..|+.-+.++..-...+ + +..++-.+++.|++.|.+-
T Consensus 6 l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~ 62 (72)
T d2ggpb1 6 LAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDC 62 (72)
T ss_dssp EECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHT
T ss_pred EEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHh
Confidence 44579999999888887777776543222 1 1122335777788877653
No 13
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=35.21 E-value=2.1 Score=30.35 Aligned_cols=48 Identities=19% Similarity=0.179 Sum_probs=30.9
Q ss_pred cCCceeecccCccChhHHHHHHHhcc--ccCcC------C-ccccCCHHHHHHHHHc
Q 016270 288 LADAGWHCSFCFRHISEFTFKMKAYS--HFDRV------R-FSYFLNHKRIQKVICK 335 (392)
Q Consensus 288 l~~aGWHCS~Cf~~i~~i~~Km~SfS--H~d~~------~-~~~~~d~~~I~~~I~~ 335 (392)
+.-.|.||+.|-..|++.+.++..-. +.++. . .+.-.+.+.|.+.|++
T Consensus 10 l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~ 66 (72)
T d1p6ta1 10 MQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEK 66 (72)
T ss_dssp EEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHH
T ss_pred EEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 45579999999988887777766442 11111 1 1344677788877754
No 14
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.94 E-value=15 Score=23.22 Aligned_cols=20 Identities=10% Similarity=0.001 Sum_probs=16.1
Q ss_pred eceeEeeecCCCCCCCCCCCCCc
Q 016270 67 HGQKISYFLRPLWESPPKPFHEI 89 (392)
Q Consensus 67 ~~~~~~~~~~p~W~~~~~p~~~~ 89 (392)
.....+|.|.|+|.|+. |.|
T Consensus 20 ~~~~y~C~C~~g~~G~~---Cei 39 (39)
T d1edmb_ 20 DINSYECWCPFGFEGKN---CEL 39 (39)
T ss_dssp ETTEEEEECCTTCCSTT---SCC
T ss_pred CCCCEEEECCCCCCCCC---CCC
Confidence 34568999999999987 754
No 15
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.07 E-value=11 Score=24.22 Aligned_cols=22 Identities=9% Similarity=-0.073 Sum_probs=18.1
Q ss_pred eceeEeeec-CCCCCCCCCCCCCcce
Q 016270 67 HGQKISYFL-RPLWESPPKPFHEIPH 91 (392)
Q Consensus 67 ~~~~~~~~~-~p~W~~~~~p~~~~p~ 91 (392)
.....+|.| .|+|.|+. |.+|+
T Consensus 19 ~~~~y~C~C~~~gy~G~~---Ce~pe 41 (41)
T d1cvua2 19 GFDQYKCDCTRTGFYGEN---CTTPE 41 (41)
T ss_dssp ETTEEEEECTTSSEETTT---TCEEC
T ss_pred CCCCEEEeCcCCCcCCcC---cCcCC
Confidence 345689999 68999998 99885
No 16
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.34 E-value=9.7 Score=24.26 Aligned_cols=19 Identities=16% Similarity=0.142 Sum_probs=15.7
Q ss_pred ceeEeeecCCCCCCCCCCCCCc
Q 016270 68 GQKISYFLRPLWESPPKPFHEI 89 (392)
Q Consensus 68 ~~~~~~~~~p~W~~~~~p~~~~ 89 (392)
....+|.|.|+|.|+. |.+
T Consensus 19 ~~~y~C~C~~G~~G~~---Ce~ 37 (39)
T d2vj3a2 19 IGEFQCICMPGYEGVH---CEV 37 (39)
T ss_dssp SSCEEEECCTTEESSS---SCE
T ss_pred CCCEEEeCCCCCccCc---Cee
Confidence 4568999999999997 754
No 17
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.71 E-value=35 Score=25.28 Aligned_cols=38 Identities=18% Similarity=0.467 Sum_probs=30.4
Q ss_pred cCCCCCcEEEee---CCCCcCCHHHHHHhhhcCCCCCceEEEEee
Q 016270 209 AGITDDDLLIMS---DVDEIPSRHTINLLRWCDDIPPVLHLRLKN 250 (392)
Q Consensus 209 ~~~~~dDliI~S---DvDEIP~p~~l~~Lk~cdg~p~~l~l~lr~ 250 (392)
+|++++|.||.= |+......+++++||.+. .+++..+.
T Consensus 57 ~GL~~GD~Il~VNg~~v~~~~~~ev~~llk~~~----~v~l~V~~ 97 (104)
T d1wi2a_ 57 AGLQEGDQVLAVNDVDFQDIEHSKAVEILKTAR----EISMRVRF 97 (104)
T ss_dssp HTCCTTCEEEEETTEECSSCCHHHHHHHHHHSS----SEEEEEEC
T ss_pred cccccCCEEEEECCEECCCCCHHHHHHHHhcCC----eEEEEEEE
Confidence 589999999976 667778889999999875 56676654
No 18
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=27.58 E-value=17 Score=30.70 Aligned_cols=86 Identities=15% Similarity=0.142 Sum_probs=41.7
Q ss_pred HHHHHHHHhcccccEEEEEEeCCCccCCCccccchhhhhhcccCCCCEEEEEeCCccCC-----CCChhhhHHHHHHHHH
Q 016270 129 ILTIRWKELYPYITQFVLLESNSTFTGKPKPLVFSAHRDQFKFVDPRLTYGTIGGRFKK-----GENPFVEEAYQRVALD 203 (392)
Q Consensus 129 lLEIRL~eL~dvVD~FVIvES~~TftG~pKpL~f~~~~~rF~~~~~KIiy~~l~~~~~~-----~~~~w~~E~~qRn~l~ 203 (392)
+|-..|.+.....|.+|++-...+ ++.++++.....+++.+..-..+.. ..+.|..+.+.|=.+.
T Consensus 21 vl~~SL~~~~~~~~~vvl~~~~i~----------~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ty~Kl~i~ 90 (263)
T d1ll2a_ 21 VLGSSLKQHRTSRRLAVLTTPQVS----------DTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCW 90 (263)
T ss_dssp HHHHHHHHTTCCSEEEEEECTTSC----------HHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGGHHHHHHGGGG
T ss_pred HHHHHHHHHCCCCCEEEEECCCCC----------HHHHHHHHHhCCcceeEEeecCcchhhhhhhccccchhhhHHHHHh
Confidence 344456666666666666533221 2233334444455554433211110 2234555666665554
Q ss_pred HHHHHcCCC-----CCcEEEeeCCCCcCC
Q 016270 204 QLLKIAGIT-----DDDLLIMSDVDEIPS 227 (392)
Q Consensus 204 ~~l~~~~~~-----~dDliI~SDvDEIP~ 227 (392)
++ ...+ |-|+|+..|+||+-.
T Consensus 91 ~l---~~ydkvlYLDaD~lv~~~id~Lf~ 116 (263)
T d1ll2a_ 91 SL---TQYSKCVFMDADTLVLANIDDLFE 116 (263)
T ss_dssp GC---TTCSEEEEECTTEEECSCCGGGGG
T ss_pred hh---cccceEEEeCCCEEEecCHHHHhc
Confidence 32 1222 677777777777643
No 19
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.09 E-value=1.6e+02 Score=24.69 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=53.5
Q ss_pred EecCCh-HHHHHHHHHHhc-----ccccEEEEEEeCCCccCCCccccchhhhhh-cccCCCCEEEEEeCCccCCCCChhh
Q 016270 121 VLFSNE-LDILTIRWKELY-----PYITQFVLLESNSTFTGKPKPLVFSAHRDQ-FKFVDPRLTYGTIGGRFKKGENPFV 193 (392)
Q Consensus 121 f~f~~E-lDlLEIRL~eL~-----dvVD~FVIvES~~TftG~pKpL~f~~~~~r-F~~~~~KIiy~~l~~~~~~~~~~w~ 193 (392)
+...|| .+.|+-=|+.+. +.....|||....|-. .. .+..+. .+....+|.++..+.. .+.
T Consensus 28 Ip~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~-~~-----~~~l~~~~~~~~~~i~vi~~~~n-----~G~- 95 (328)
T d1xhba2 28 IVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERD-FL-----KRPLESYVKKLKVPVHVIRMEQR-----SGL- 95 (328)
T ss_dssp EEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCG-GG-----THHHHHHHHSSSSCEEEEECSSC-----CCH-
T ss_pred EeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChh-hH-----HHHHHHHHHhcCCCeEEEEeccc-----ccc-
Confidence 444565 566654455443 2235789998665431 11 112222 2455667777665421 122
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEeeCCCCcCCHHHHHHh
Q 016270 194 EEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSRHTINLL 234 (392)
Q Consensus 194 ~E~~qRn~l~~~l~~~~~~~dDliI~SDvDEIP~p~~l~~L 234 (392)
+..|| .+++. ..+|+|++.|.|-++.|..|..|
T Consensus 96 --~~a~N---~Gi~~---a~gd~i~flD~D~~~~p~~l~~l 128 (328)
T d1xhba2 96 --IRARL---KGAAV---SRGQVITFLDAHCECTAGWLEPL 128 (328)
T ss_dssp --HHHHH---HHHHH---CCSSEEEEEESSEEECTTCHHHH
T ss_pred --hHHHH---HHHHh---hhcceeeecCcccccChhHHHHH
Confidence 22344 33443 36999999999999999988865
No 20
>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C, EpsC {Vibrio cholerae [TaxId: 666]}
Probab=22.65 E-value=63 Score=22.99 Aligned_cols=28 Identities=18% Similarity=0.355 Sum_probs=23.7
Q ss_pred HHcCCCCCcEEEeeCCCCcCCHHHHHHh
Q 016270 207 KIAGITDDDLLIMSDVDEIPSRHTINLL 234 (392)
Q Consensus 207 ~~~~~~~dDliI~SDvDEIP~p~~l~~L 234 (392)
.++|++++|+|+--|--.|-+++.+..+
T Consensus 33 ~~aGl~~GDiI~~ing~~v~~~~~~~~~ 60 (87)
T d2i6va1 33 ESIGLQDGDMAVALNGLDLTDPNVMNTL 60 (87)
T ss_dssp HHTTCCTTCEEEEETTEETTCHHHHHHH
T ss_pred HHCCCCCCCEEEEECCEEeecHHHHHHH
Confidence 4589999999999999999998876544
No 21
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.31 E-value=15 Score=23.41 Aligned_cols=17 Identities=18% Similarity=0.145 Sum_probs=14.4
Q ss_pred eEeeecCCCCCCCCCCCCCc
Q 016270 70 KISYFLRPLWESPPKPFHEI 89 (392)
Q Consensus 70 ~~~~~~~p~W~~~~~p~~~~ 89 (392)
..+|.|.|+|.|+. |.+
T Consensus 25 ~y~C~C~~G~~G~~---Ce~ 41 (42)
T d2vj3a1 25 SFECQCLQGYTGPR---CEI 41 (42)
T ss_dssp SEEEECCTTEESTT---SCE
T ss_pred CEEeECCCCCcCCC---CcC
Confidence 58999999999986 654
No 22
>d1ak2a2 g.41.2.1 (A:147-176) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=21.27 E-value=18 Score=21.94 Aligned_cols=17 Identities=12% Similarity=0.208 Sum_probs=12.6
Q ss_pred ccccccCCCccccccCCC
Q 016270 11 HYCSKKSDDICGNVCGQE 28 (392)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~ 28 (392)
.|+.-|.+++| |+||.+
T Consensus 10 ~f~PPk~~g~c-D~cg~~ 26 (30)
T d1ak2a2 10 EFNPPKEPMKD-DITGEP 26 (30)
T ss_dssp TTBCCSSTTBC-TTTCCB
T ss_pred cccCCCCCCcc-CCCCCC
Confidence 46788999999 467754
Done!