Query 016272
Match_columns 392
No_of_seqs 275 out of 1899
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 05:21:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016272.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016272hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02883 Branched-chain amino 100.0 1.4E-91 3.1E-96 703.1 39.9 381 12-392 2-384 (384)
2 PLN02259 branched-chain-amino- 100.0 3.4E-91 7.3E-96 701.7 38.6 384 7-392 1-388 (388)
3 PLN02782 Branched-chain amino 100.0 7.3E-88 1.6E-92 680.6 40.9 340 53-392 62-403 (403)
4 KOG0975 Branched chain aminotr 100.0 5.3E-89 1.2E-93 661.6 29.0 337 52-390 36-379 (379)
5 PLN03117 Branched-chain-amino- 100.0 1.3E-76 2.9E-81 591.9 41.3 339 53-392 12-351 (355)
6 PRK13357 branched-chain amino 100.0 6.9E-69 1.5E-73 536.8 41.0 339 54-392 10-356 (356)
7 TIGR01123 ilvE_II branched-cha 100.0 5.7E-62 1.2E-66 479.4 36.2 306 86-391 1-313 (313)
8 TIGR01122 ilvE_I branched-chai 100.0 2.2E-59 4.8E-64 457.9 34.7 291 86-391 1-298 (298)
9 PRK06606 branched-chain amino 100.0 1.6E-57 3.5E-62 446.5 35.1 292 85-391 9-306 (306)
10 COG0115 IlvE Branched-chain am 100.0 2E-55 4.3E-60 427.5 32.7 277 85-381 4-284 (284)
11 cd01557 BCAT_beta_family BCAT_ 100.0 7.8E-55 1.7E-59 422.3 34.1 277 98-379 1-279 (279)
12 PRK07544 branched-chain amino 100.0 9.1E-54 2E-58 417.3 32.2 275 85-381 11-290 (292)
13 PRK12479 branched-chain amino 100.0 1.3E-53 2.8E-58 417.6 32.9 273 85-380 6-287 (299)
14 PRK08320 branched-chain amino 100.0 9.1E-53 2E-57 409.3 33.7 273 85-377 5-283 (288)
15 PRK13356 aminotransferase; Pro 100.0 9.4E-53 2E-57 409.0 33.5 269 85-376 9-281 (286)
16 cd01558 D-AAT_like D-Alanine a 100.0 2.8E-52 6.1E-57 401.9 31.7 265 86-373 1-270 (270)
17 PRK07650 4-amino-4-deoxychoris 100.0 7E-52 1.5E-56 402.2 32.5 271 85-378 2-276 (283)
18 PRK06680 D-amino acid aminotra 100.0 3E-51 6.4E-56 398.5 34.1 271 85-379 5-283 (286)
19 TIGR01121 D_amino_aminoT D-ami 100.0 4.7E-51 1E-55 395.2 32.9 264 85-375 2-273 (276)
20 PLN02845 Branched-chain-amino- 100.0 8.1E-51 1.8E-55 403.6 33.7 272 85-379 43-324 (336)
21 PRK12400 D-amino acid aminotra 100.0 9E-51 2E-55 395.9 33.4 264 85-375 7-280 (290)
22 PRK07849 4-amino-4-deoxychoris 100.0 1.7E-50 3.8E-55 394.3 33.4 267 85-375 9-286 (292)
23 TIGR03461 pabC_Proteo aminodeo 100.0 4E-50 8.7E-55 385.2 31.6 257 86-370 1-260 (261)
24 PRK06092 4-amino-4-deoxychoris 100.0 9E-50 1.9E-54 384.4 32.5 262 85-374 2-266 (268)
25 cd00449 PLPDE_IV PyridoxaL 5'- 100.0 2E-49 4.4E-54 378.3 31.7 252 103-373 1-256 (256)
26 cd01559 ADCL_like ADCL_like: 4 100.0 2E-49 4.3E-54 378.1 30.1 247 103-373 1-249 (249)
27 PRK09266 hypothetical protein; 100.0 6.4E-48 1.4E-52 371.3 30.2 255 85-375 5-260 (266)
28 PF01063 Aminotran_4: Aminotra 100.0 2.8E-39 6.2E-44 303.3 26.8 224 129-373 1-231 (231)
29 PRK07546 hypothetical protein; 100.0 2.4E-36 5.1E-41 281.3 25.4 205 110-349 4-209 (209)
30 PRK07101 hypothetical protein; 100.0 4.1E-28 8.9E-33 222.4 21.7 182 111-343 4-187 (187)
31 PF15507 DUF4649: Domain of un 51.7 28 0.00061 27.1 4.1 53 319-371 11-65 (72)
32 PF03698 UPF0180: Uncharacteri 33.2 1.2E+02 0.0025 24.1 5.2 66 306-373 12-79 (80)
33 PF13051 DUF3912: Protein of u 26.2 61 0.0013 24.1 2.2 38 278-315 31-68 (68)
34 PRK03094 hypothetical protein; 24.0 2.4E+02 0.0053 22.4 5.5 65 307-373 13-79 (80)
35 COG2257 Uncharacterized homolo 23.6 56 0.0012 26.5 1.8 32 300-331 30-61 (92)
36 cd05569 PTS_IIB_fructose PTS_I 22.4 1.6E+02 0.0034 23.8 4.3 37 305-341 19-64 (96)
37 PF09778 Guanylate_cyc_2: Guan 21.9 1E+02 0.0022 29.0 3.5 27 304-330 92-118 (212)
38 TIGR00829 FRU PTS system, fruc 21.5 1.5E+02 0.0032 23.6 3.9 32 309-340 22-62 (85)
No 1
>PLN02883 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=1.4e-91 Score=703.06 Aligned_cols=381 Identities=62% Similarity=1.006 Sum_probs=354.2
Q ss_pred HHHh-hhhhhhccccccccCcccccchhhhhcccccCCCCCCCCCCccCCCCCCCCCccccccCceeEEEeccc-eEeCC
Q 016272 12 CLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKG 89 (392)
Q Consensus 12 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g 89 (392)
.||+ |.|++.+++-.+..+.+.++.+++..++...+........+..+++||++|+||++|||||++++|+++ +|.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~~~ 81 (384)
T PLN02883 2 ALRRCLPQSSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFEQG 81 (384)
T ss_pred chhhhccccccchhhhhccccceeccccccccchhhhcccccccccccccCCchhcCcCCeecCceEEEEEcCCCcccCC
Confidence 4666 788888888788999999999998888754444455577788889999999999999999999998874 89999
Q ss_pred eeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCC
Q 016272 90 RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW 169 (392)
Q Consensus 90 ~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~ 169 (392)
+|+|+++++|+|++++||||||||||||+|++.||++++||+++|++||++||++|+||.++.++|+++|+++++.|.+|
T Consensus 82 ~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~w 161 (384)
T PLN02883 82 YLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRW 161 (384)
T ss_pred eEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHH
Q 016272 170 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLK 249 (392)
Q Consensus 170 vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~ 249 (392)
||+.+.+++||||+++++++.+|+.++.+++|+|+++|+++|+++|++++++.+++.++|++|++++++|++|||+++++
T Consensus 162 vp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~y~~~g~~~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~ll 241 (384)
T PLN02883 162 VPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLE 241 (384)
T ss_pred CCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEecccccccCcceEEEEECccccccCCCCCcccchhhhHHHHHH
Confidence 99987779999999999988899998889999999999999998888899999988889999999999999999999999
Q ss_pred HHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHh
Q 016272 250 AISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELL 329 (392)
Q Consensus 250 a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~ 329 (392)
++++|+++||||+||||..++|+|+|+++||||++++++|+||+++++||+||||++||++|+++|++|+||+|+++||.
T Consensus 242 a~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF~v~~~~l~TP~l~~~iLpGITR~svl~la~~~G~~V~Er~i~~~eL~ 321 (384)
T PLN02883 242 VMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNIIVTPATSGTILGGITRKSIIEIALDLGYKVEERRVPVEELK 321 (384)
T ss_pred HHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEeCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence 99999999999999999755679999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHHhhccCCCCCCCCeEECC
Q 016272 330 EADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 330 ~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 392 (392)
+|||+|+|||+++|+||++|+++++.+.+..+.||++++|++.|.+||+|+++|++||+++|.
T Consensus 322 ~AdEvF~tgTa~~I~PV~~I~~~~~~~~~~~~~G~vt~~L~~~l~~iq~G~~~d~~~W~~~~~ 384 (384)
T PLN02883 322 EAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQLRSILLGIQTGSIQDTKDWVLQIA 384 (384)
T ss_pred hCCEeeeccChhheEEEEEEeccCceeecccCCCHHHHHHHHHHHHHHcCCCCCCCCCeEeCC
Confidence 999999999999999999999887766433335899999999999999999999999999873
No 2
>PLN02259 branched-chain-amino-acid aminotransferase 2
Probab=100.00 E-value=3.4e-91 Score=701.74 Aligned_cols=384 Identities=69% Similarity=1.146 Sum_probs=358.6
Q ss_pred HHH-HHHHHh-hhhhhhccccccccCcccccchhhhhcccc-cCCCCCCCCCCccCCCCCCCCCccccccCceeEEEecc
Q 016272 7 MIR-NACLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQ-DCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN 83 (392)
Q Consensus 7 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~ 83 (392)
||+ ..+||+ |+..++++. ..++.+.++.+++..++.. ..........++.+++||++|+||++|||||++++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~~td~m~~~~~~~ 78 (388)
T PLN02259 1 MIKTITSLRKTLVLPLHLHI--RTLQTFAKYNAQAASALREERKKPLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSK 78 (388)
T ss_pred CccchhhhhhheEeeeehhh--hhhhhhhhhccccccccchhhccccccccccccccCCccccCCCCcccCceEEEEECC
Confidence 667 788999 888988888 8889998899988887743 23344456677778999999999999999999999976
Q ss_pred -ceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Q 016272 84 -DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQT 162 (392)
Q Consensus 84 -~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~l 162 (392)
|+|.||+|+|++++.++|.|++||||||||||||+|+..||++++||+++|++||++||++|+||.++.++|+++|.++
T Consensus 79 ~~~w~~g~ivp~~~~~i~~~drgl~YGdgvFEglkayr~~~G~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~l 158 (388)
T PLN02259 79 DGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQT 158 (388)
T ss_pred CCeEECCEEeEchhCeeCchhhHHHhhhhhhhcEEEEECCCCeEeecCcHHHHHHHHHhHHHhCCCCcCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccC
Q 016272 163 ALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAIS 242 (392)
Q Consensus 163 v~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~ 242 (392)
++.|..|||+.+.+++||||+++|+++.+|+.|+.+++++|+++|+++|+++|++++++.+++++.|++|++++++|+++
T Consensus 159 v~~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p~~~~~~~i~~~p~~~~~~~g~~~i~l~v~~~~~Ra~p~~~g~~K~~~ 238 (388)
T PLN02259 159 ALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSIT 238 (388)
T ss_pred HHhccccCCCCCCceEEEEEEEEecCCccCcCCCCCcEEEEEEEechhhhhcCcceEEEEeecceeccCCCCCcccchhh
Confidence 99999999998777999999999998889999888899999999999999888888999888789999999999999988
Q ss_pred ChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEe
Q 016272 243 NYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERA 322 (392)
Q Consensus 243 nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~ 322 (392)
||+++++++++|+++||||+||||..++|+|+|+++||||++++++|+||+++++||+||||++||++|+++|++|+||+
T Consensus 239 NY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP~l~~~iL~GITR~sIl~la~~~G~~V~Er~ 318 (388)
T PLN02259 239 NYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKA 318 (388)
T ss_pred hHHHHHHHHHHHHHcCCCEEEEecCCCCCEEEEcCcEEEEEEECCEEEcCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEE
Confidence 99999999999999999999999976689999999999999999999999999999999999999999999999999999
Q ss_pred eCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHHhhccCCCCCCCCeEECC
Q 016272 323 IPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 323 i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 392 (392)
++++||.+|||+|+|||+++|+||++|+++|+.+.++++.||++++|+++|.+||+|++||++||+++||
T Consensus 319 i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~~~~~~~~~~~g~~t~~L~~~l~~iq~G~~~~~~~W~~~~~ 388 (388)
T PLN02259 319 VHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388 (388)
T ss_pred CCHHHHHhCCEEEEcCCcceEEEEEEEecCCceEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCCCeEECC
Confidence 9999999999999999999999999999988887777667899999999999999999999999999987
No 3
>PLN02782 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=7.3e-88 Score=680.55 Aligned_cols=340 Identities=71% Similarity=1.227 Sum_probs=324.2
Q ss_pred CCCCccCCCCCCCCCccccccCceeEEEecc-ceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeCh
Q 016272 53 SDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRP 131 (392)
Q Consensus 53 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~-~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~ 131 (392)
...+...++||++|+||+++||||++++|++ |+|.||+|+|++++.|+|.|++||||||||||||+|++.||++++|||
T Consensus 62 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~ 141 (403)
T PLN02782 62 TEVTELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRP 141 (403)
T ss_pred cCCcccccCCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeCh
Confidence 4455567899999999999999999999976 489999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCcc
Q 016272 132 DQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNY 211 (392)
Q Consensus 132 ~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y 211 (392)
++|++||++||++|+||.++.++|+++|+++++.|..|||+.+.+++||||+++|+++.+|+.|+.+++++|+++|+++|
T Consensus 142 d~H~~RL~~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~ 221 (403)
T PLN02782 142 EENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNY 221 (403)
T ss_pred HHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECccc
Confidence 99999999999999999999999999999999999999999877899999999999888999988889999999999999
Q ss_pred ccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEc
Q 016272 212 FKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIIST 291 (392)
Q Consensus 212 ~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~T 291 (392)
++.|.+++++.+++++.|++|++++++|++|||+++++++++|+++||+|+||||..++|+|+|++++|||++++++|+|
T Consensus 222 ~~~g~~~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~T 301 (403)
T PLN02782 222 FKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVIST 301 (403)
T ss_pred cccCCccEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEc
Confidence 98888999999887899999999999999999999999999999999999999997557999999999999999999999
Q ss_pred CCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHH
Q 016272 292 PATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELY 370 (392)
Q Consensus 292 Ppl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~ 370 (392)
|+++++||+||||++||++|+++|++|+||+|+++||.+|||+|+|||+++|+||++|.|+|+.+.++++ .||++++|+
T Consensus 302 P~l~~~iLpGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~ 381 (403)
T PLN02782 302 PAIKGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLY 381 (403)
T ss_pred CCCcCCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999877766 799999999
Q ss_pred HHHHHhhccCCCCCCCCeEECC
Q 016272 371 STLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 371 ~~l~~iq~g~~~d~~~W~~~v~ 392 (392)
+.|.+||+|+.||++||+++|+
T Consensus 382 ~~l~~iq~G~~~~~~~W~~~v~ 403 (403)
T PLN02782 382 TVLTSLQMGLIEDNMNWTVELS 403 (403)
T ss_pred HHHHHHhcCCCCCCCCCeEECC
Confidence 9999999999999999999986
No 4
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-89 Score=661.60 Aligned_cols=337 Identities=55% Similarity=0.954 Sum_probs=323.1
Q ss_pred CCCCCccCCCCCCCCCccccccCceeEEEeccceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeCh
Q 016272 52 YSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRP 131 (392)
Q Consensus 52 ~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~ 131 (392)
...+.+...+||++|+||.+|||||++++|++++|..|+|.|++++.+||.+.+|||||++||||||||+.||++++|||
T Consensus 36 ~~~~~k~~~~d~~~L~fg~~~td~m~~~k~~~~gw~~~~I~p~gni~~~Paa~vlhy~~~lfEG~KAyRt~d~~i~LFrP 115 (379)
T KOG0975|consen 36 TQTDEKPAPIDWDELGFGLVFTDHMLTIKWSEDGWSQGEISPFGNLSLHPAAKVLHYGQGLFEGLKAYRTEDGKIRLFRP 115 (379)
T ss_pred ccCCCccCcCCHHHhccCCcccceeEEEeccccCcCCCCccCcCCEeeChhhhceecchhhccccccccCCCCeEEEecc
Confidence 34566777899999999999999999999997789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCcc
Q 016272 132 DQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNY 211 (392)
Q Consensus 132 ~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y 211 (392)
++|+.||++||.|++||.|+.++|.++|++++.+|++|||+.++++|||||+++|+++.+|++++++++|+++++|+++|
T Consensus 116 d~N~~Rm~~sA~r~~lP~p~~~e~ie~i~~lv~~~~~wVP~~~~~SLyirp~l~Gt~~~Lgv~~~~e~~l~vi~spvg~y 195 (379)
T KOG0975|consen 116 DQNMDRMLRSAERACLPSPDVEEFIEAIKQLVLADKEWVPPPGKGSLYIRPLLIGTDPVLGVSPAPEATLFVIVSPVGPY 195 (379)
T ss_pred hhhHHHHHhhhhhccCCCCCHHHHHHHHHHHHHhcCcccCCCCCceEEEeeeeccCCcccccccCCcceEEEEEcccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCE--E
Q 016272 212 FKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNI--I 289 (392)
Q Consensus 212 ~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~--l 289 (392)
|+.|+++++|.+++.++|++|+|+|+.|+++||+++++++.||+++||+|+||||.. ++||+|+++||||++++++ +
T Consensus 196 f~~g~~~v~L~v~~~~~Ra~pgg~g~~k~~~NY~P~vl~q~eA~~~G~~dvLwL~~d-~~~ItEv~tmNiF~v~~n~~el 274 (379)
T KOG0975|consen 196 FKSGFKGVNLLVDPEFVRAWPGGTGGVKLGGNYAPNVLAQKEAKSKGASDVLWLDGD-GGYITEVGTMNIFMVKKNEDEL 274 (379)
T ss_pred ccccccceEEEEecceeecCCCCCCceeeccccchHHHHHHHHHhcCcceeEEEecC-CCceeeccceeEEEEEcCceeE
Confidence 999999999999999999999999999999999999999999999999999999985 4599999999999999988 9
Q ss_pred EcCCCCCCcccchHHHHHHHHHHHCC-CcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEE---eeCCC-chH
Q 016272 290 STPATSGTILAGITRKSIIEIASDCG-FQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRI---EFKTG-AQS 364 (392)
Q Consensus 290 ~TPpl~~~IL~GITR~~il~la~~~G-~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~---~~~~~-~g~ 364 (392)
+|||+++.|||||||++|+|+|+++| ++|+||.++++|+.+|+|+|+||||++|.||++|.|+++.| .+++| .||
T Consensus 275 vTPp~dg~ILpGvTR~sileLa~~~g~~~V~Er~vtv~e~~~A~Evf~tGTA~~v~pV~~i~~~~~~i~~~~~~~g~~g~ 354 (379)
T KOG0975|consen 275 VTPPLDGTILPGVTRKSILELARDLGEFKVEERDVTVDELKTADEVFCTGTAAVVSPVGSILYKDEKIHIPTIGEGKEGP 354 (379)
T ss_pred ecCCCCCcccCCccHHHHHHHHHHhCceEEEEEEEeHHHhhhhHhhhcccceeeeccccceeecccccceeecCCCCccH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999443 45677 899
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCeEE
Q 016272 365 VSRELYSTLVGIQTGLIKDNKGWTVE 390 (392)
Q Consensus 365 vt~~L~~~l~~iq~g~~~d~~~W~~~ 390 (392)
++++|++.|.+||+|. +|..+|+++
T Consensus 355 l~~~l~~~l~~iq~g~-~~~~~w~~~ 379 (379)
T KOG0975|consen 355 LAKKLLSTLTDIQYGR-EPKKGWTVP 379 (379)
T ss_pred HHHHHHHHHHHhhcCC-cCCCCcccC
Confidence 9999999999999999 888899863
No 5
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional
Probab=100.00 E-value=1.3e-76 Score=591.92 Aligned_cols=339 Identities=61% Similarity=1.108 Sum_probs=311.9
Q ss_pred CCCCccCCCCCCCCCccccccCceeEEEeccc-eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeCh
Q 016272 53 SDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRP 131 (392)
Q Consensus 53 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~ 131 (392)
....+..++||++||||.+|||||+.++|+++ .|.||+|+|.+++.+++.|++||||||||||||+|+..||++++|++
T Consensus 12 ~~~~~~~~~~~~~~~f~~~~~~~m~~~~~~~~~~~~ng~~v~~~~a~i~~~drgl~yGDGvFEtir~y~~~~G~i~lf~l 91 (355)
T PLN03117 12 KADEKYANVKWEELGFALVPTDYMYVAKCKQGESFSEGKIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRP 91 (355)
T ss_pred CccccccccCccccCCCccccCceEEEEcCCCCeEECCEEEEchhceeCcchhhhhhcceeEeeEEEEECCCCcEeeeCc
Confidence 34445567999999999999999999999876 79999999999999999999999999999999999888999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCcc
Q 016272 132 DQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNY 211 (392)
Q Consensus 132 ~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y 211 (392)
++|++||.+||++|+||.++.++|++.|.++++.|..|+|+.+.+.+||||.++|+++.+|+.|++++.+++++.|.+++
T Consensus 92 ~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i~~lv~~n~~~i~~~~~~~~yir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~ 171 (355)
T PLN03117 92 DQNALRMQTGADRLCMTPPSLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLIGSGAVLGVAPAPEYTFLIYASPVGNY 171 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccccCCCCCcEEEEEEEEEecCccCcCCCCCcEEEEEEEecccc
Confidence 99999999999999999889999999999999999999987766789999988877777888877778888999998766
Q ss_pred ccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEc
Q 016272 212 FKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIIST 291 (392)
Q Consensus 212 ~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~T 291 (392)
+.. .+++++.+++.+.|+.|.+++++|+++||+++++++++|+++||||+|+||..++|+|+|++++|||+++|++|+|
T Consensus 172 ~~~-~~gi~l~~~~~~~r~~~~~l~~~K~~~nyl~~vla~~eA~~~G~deaL~ld~~~~g~v~E~~~sNlF~v~~~~l~T 250 (355)
T PLN03117 172 HKA-SSGLNLKVDHKHRRAHSGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEELSACNIFILKGNIVST 250 (355)
T ss_pred ccC-CCCEEEEEcCceEeCCCCCccchhhhhhhHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEe
Confidence 542 3678887766678999989999999779999999999999999999999997434799999999999999999999
Q ss_pred CCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHH
Q 016272 292 PATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYS 371 (392)
Q Consensus 292 Ppl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~ 371 (392)
|+++.+||+||||++||++|+++|++|+|+.++++||.+|||+|+|||+.+|+||.+|++.++.+.++++.+|+|++|++
T Consensus 251 P~l~~~iL~GItR~~vl~la~~~Gi~v~Er~i~~~eL~~AdEvFltnT~~~I~PV~~i~~~~~~~~~~~~~~~~~~~l~~ 330 (355)
T PLN03117 251 PPTSGTILPGVTRKSISELARDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGEEALSTKLHL 330 (355)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHCCCEEEEEEccHHHHhhCCEEEEccCcceEEEEEEEEecCceEEeCCCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888888787667899999999
Q ss_pred HHHHhhccCCCCCCCCeEECC
Q 016272 372 TLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 372 ~l~~iq~g~~~d~~~W~~~v~ 392 (392)
+|.+||+|+.+|++||+++|+
T Consensus 331 ~~~~~~~g~~~~~~~W~~~v~ 351 (355)
T PLN03117 331 ILTNIQMGVVEDKKGWMVEID 351 (355)
T ss_pred HHHHHhCCCCCCCCCCEEEcc
Confidence 999999999999999999984
No 6
>PRK13357 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=6.9e-69 Score=536.83 Aligned_cols=339 Identities=45% Similarity=0.830 Sum_probs=305.1
Q ss_pred CCCccCCCCCCCCCccccccCceeEEEeccceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHH
Q 016272 54 DDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQ 133 (392)
Q Consensus 54 ~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~ 133 (392)
....+..+||.+||||++++|||++..|++|.|.||+++|.+++.+++.|++|+||||||||+|+|++.+|++++|++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~vp~~~a~is~~Drg~~yGDGvFEtir~~~~~~G~~~~f~l~~ 89 (356)
T PRK13357 10 TSDEKRAIDWANLGFGYVFTDHMVVIDYKDGKWHDARLVPYGPLELDPAATVLHYGQEIFEGLKAYRHKDGSIVLFRPDA 89 (356)
T ss_pred ccccccCCCccccCCCccccceeEEEEecCCcccCCeEeeCCCceeCcccchhhhcceeeeeEEEEEcCCCcEeeeChHH
Confidence 33445567999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCC-CCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccc
Q 016272 134 NAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPP-PGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF 212 (392)
Q Consensus 134 H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~-~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~ 212 (392)
|++||.+||++|+||.++.+++.+.+.++++.|..++++ ..++.+|||+++.++...+|+.+...+.+++++.|.++++
T Consensus 90 Hl~RL~~Sa~~L~i~~~~~~~l~~~i~~li~~n~~~~~~~~~~~~~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~~~~ 169 (356)
T PRK13357 90 NAKRLQRSADRLLMPELPEELFLEAVKQLVKADRDWVPPYGEGASLYLRPFMIATEPFLGVKPAEEYIFCVIASPVGAYF 169 (356)
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhcccccCCCCCCccEEEEEEEEccCCcccccCCCccEEEEEEEechhhc
Confidence 999999999999999779999999999999999876532 2345789999887766667887666788999999887776
Q ss_pred cCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcC
Q 016272 213 KEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTP 292 (392)
Q Consensus 213 ~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP 292 (392)
..+.+++++.+...+.|..|..++++|+..||+.+++++++|+++||||+|++|..++|+|+|++++|||++++++++||
T Consensus 170 ~~~~~~v~l~~~~~~~r~~~~~l~~~Kt~~nyl~~vla~~eA~~~G~deaL~ld~~~~G~V~E~s~sNlF~v~~~~l~TP 249 (356)
T PRK13357 170 KGGVKPVSIWVSDEYDRAAPGGTGAAKVGGNYAASLLAQAEAKEKGCDQVLYLDAVEHTYIEEVGGMNFFFITKDGTVTP 249 (356)
T ss_pred ccCCCceEEEEcCCeEecCCCCcchhhcccccHHHHHHHHHHHHCCCCEEEEEcCCCCCEEEEcCcEEEEEEECCEEEEC
Confidence 66667888877657889888888999996699999999999999999999999963479999999999999999999999
Q ss_pred CCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHH------HhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHH
Q 016272 293 ATSGTILAGITRKSIIEIASDCGFQVEERAIPVDE------LLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSV 365 (392)
Q Consensus 293 pl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~e------L~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~v 365 (392)
|++.+||+||||+.||++|++.|++|+|++++++| |.+|||+|+|||+.+|+||.+|++++....++++ +||+
T Consensus 250 pl~~giL~GItR~~vlela~~~Gi~v~e~~i~~~el~~~~~L~~AdevFltnS~~gi~PV~~id~~~~~~~~~~g~~g~~ 329 (356)
T PRK13357 250 PLSGSILPGITRDSLLQLAEDLGLTVEERPVSIDEWQADAASGEFTEAFACGTAAVITPIGGIKYKDKEFVIGDGEVGPV 329 (356)
T ss_pred CCCCCCCcchHHHHHHHHHHHCCCeEEEEecCHHHhhhhhccCcceEEEEcccccEEEEEEEEEeCCCEEEcCCCCCChH
Confidence 99999999999999999999999999999999999 8999999999999999999999765544555666 7999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCeEECC
Q 016272 366 SRELYSTLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 366 t~~L~~~l~~iq~g~~~d~~~W~~~v~ 392 (392)
+++|++.|.+++.|+.++..+|.++||
T Consensus 330 t~~L~~~~~~~~~~~~~~~~~w~~~~~ 356 (356)
T PRK13357 330 TQKLYDELTGIQFGDVEDPHGWIVKVD 356 (356)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCcEeCc
Confidence 999999999999999999999999987
No 7
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=100.00 E-value=5.7e-62 Score=479.40 Aligned_cols=306 Identities=50% Similarity=0.884 Sum_probs=274.9
Q ss_pred EeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Q 016272 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA 165 (392)
Q Consensus 86 w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~ 165 (392)
|.||+|+|.+++.+++.|++|+||||||||||+|+..+|++++|++++|++||.+||++|+||.++.+.|.+.+.++++.
T Consensus 1 ~~nG~~~~~~~a~i~~~Drg~~yGdGvFEtir~~~~~~g~~~~~~l~~Hl~RL~~sa~~L~i~~~~~~~l~~~l~~~~~~ 80 (313)
T TIGR01123 1 WHNGRLTPYGPLHLDPGSTVLHYGQECFEGLKAYRCADGSIVLFRPDANAARLRRSARRLLMPELPDELFLEALRQLVKA 80 (313)
T ss_pred CCCCEEEECccCeeCcchhHHHhhhhheeeeeEEECCCCcEeeeChHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999997779999999999999999999999999988999999999999999
Q ss_pred cCCCCCCC-CCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCCh
Q 016272 166 NKRWVPPP-GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNY 244 (392)
Q Consensus 166 ~~~~vp~~-~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY 244 (392)
+..+++.. .++.+|||+++.+++..+|+.+.+.+.++|++.|.++++..|.+++++.+...+.|..|..++++|+..||
T Consensus 81 ~~~~~~~~~~~~~~~ir~~v~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~l~~~K~~~ny 160 (313)
T TIGR01123 81 NKDWVPPYGSGASLYLRPFVIGTEPNLGVRPAPEYLFYVFASPVGAYFKGGLAPVSIFVTTEYDRAAPGGTGAVKVGGNY 160 (313)
T ss_pred ccccCCCCCCCCcEEEEeEEEecCCccccCCCCccEEEEEEEEchhhccccccceeEEecccceecCCCCCccceecccc
Confidence 98776543 24578999988877666788776678888888888777766777777766566788888878999996699
Q ss_pred HHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEEC-CEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEee
Q 016272 245 APVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKG-NIISTPATSGTILAGITRKSIIEIASDCGFQVEERAI 323 (392)
Q Consensus 245 ~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~-~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i 323 (392)
+.+++++++|+++||||+|++|.+.+|+|+|++++|||++++ |+|+|||++.+||+||||+.||++|++.|++|+|+++
T Consensus 161 l~~vla~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~v~~~g~l~Tp~l~~~~L~GItR~~vi~l~~~~Gi~v~e~~i 240 (313)
T TIGR01123 161 AASLLAQAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFFITGDGELVTPPLSGSILPGITRDSLLQLAKDLGMEVEERRI 240 (313)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEEEEcCCEEEeCCCCCCCCcchHHHHHHHHHHHcCCeEEEEec
Confidence 999999999999999999999974234599999999999985 7999999999999999999999999999999999999
Q ss_pred CHHHHhhc----ceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 016272 324 PVDELLEA----DEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 391 (392)
Q Consensus 324 ~~~eL~~a----dEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 391 (392)
+++||.+| ||+|+|||+.+|+||.+|.++++.+.++++ +||++++|++.|.+++.|+.++..+|+++|
T Consensus 241 ~~~~l~~A~~~~devfltnS~~gi~PV~~i~~d~~~~~~~~g~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~~ 313 (313)
T TIGR01123 241 DIDELKAFVEAGEEVFACGTAAVITPVGEIQHGGKEVVFASGQPGEVTKALYDELTDIQYGDFEDPYGWIVEV 313 (313)
T ss_pred CHHHHHHHHhcCCEEEEccCceEEEEEEEEEECCeEEEcCCCCCChHHHHHHHHHHHHhcCCCCCCCCCeeeC
Confidence 99999999 999999999999999999777877666766 799999999999999999999988999876
No 8
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family.
Probab=100.00 E-value=2.2e-59 Score=457.86 Aligned_cols=291 Identities=32% Similarity=0.547 Sum_probs=257.2
Q ss_pred EeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHH
Q 016272 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164 (392)
Q Consensus 86 w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv~ 164 (392)
|.||+++|.+++.+++.|++|+||||+|||||+|++.||. .+|++++|++||.+||++|+|+.+ +.++|.+.+.++++
T Consensus 1 ~~ng~~v~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~-~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~ 79 (298)
T TIGR01122 1 WMDGEFVDWEDAKVHVLTHALHYGTGVFEGIRAYDTDKGP-AIFRLKEHIQRLYDSAKIYRMEIPYSKEELMEATRETLR 79 (298)
T ss_pred CcCCEEEEhhhcccChhhhhhhccceEEEEEEEEcCCCcc-eeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999775543 589999999999999999999966 79999999999999
Q ss_pred HcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCccccCC--CccEEEEeeccccccCCCCC-CCCC
Q 016272 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKEG--LAPLNLYVEDEFHRATPGGA-GGVK 239 (392)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y~~~g--~~pv~l~v~~~~~R~~p~g~-g~~K 239 (392)
.+.. ...|||++++++.+.+|+.|. .++.+++++.|.+.++... .+++++.+.+ +.|..+..+ +++|
T Consensus 80 ~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~-~~r~~~~~~~~~~K 151 (298)
T TIGR01122 80 KNNL-------RSAYIRPLVFRGDGDLGLNPRAGYKPDVIIAAWPWGAYLGEEALEKGIDAKVSS-WRRNAPNTIPTAAK 151 (298)
T ss_pred hcCC-------CCEEEEEEEEEccCCCCcCCCCCCCceEEEEEeccccccCcccccCCeEEEEEE-EEcCCCCCcCccch
Confidence 8752 357999987765556777763 3577888888876654321 2477777764 677776664 8999
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEE
Q 016272 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 319 (392)
Q Consensus 240 t~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~ 319 (392)
+.|||+.++++.++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|++.|++|+
T Consensus 152 ~~~~yl~~v~a~~~a~~~g~de~l~ld~--~g~v~E~s~sNlf~v~~~~l~TP~~~~~~L~GItR~~il~la~~~g~~v~ 229 (298)
T TIGR01122 152 AGGNYLNSLLAKSEARRHGYDEAILLDV--EGYVAEGSGENIFIVKDGVLFTPPVTSSILPGITRDTVITLAKELGIEVV 229 (298)
T ss_pred hhhhhHHHHHHHHHHHHcCCCEEEEECC--CCCEEECCceEEEEEECCEEECCCCCCCcCcchHHHHHHHHHHHcCCcEE
Confidence 9877999999999999999999999997 79999999999999999999999999999999999999999999999999
Q ss_pred EEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 016272 320 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 391 (392)
Q Consensus 320 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 391 (392)
|++++++||.+|||+|+|||+.+|+||.+| +++.+ +++ +||++++|++.|.++++|..+|+++|+++|
T Consensus 230 e~~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~~~~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~~ 298 (298)
T TIGR01122 230 EQPISREELYTADEAFFTGTAAEITPIREV--DGRKI--GNGRRGPVTKKLQEAFFDLVTGGTEDYWGWLTYV 298 (298)
T ss_pred EEeCCHHHHhhCCEEEEcCCcceEEEEEEE--CCEEC--CCCCCChHHHHHHHHHHHHHcCCCCCcCCCceeC
Confidence 999999999999999999999999999999 56554 666 799999999999999999999999999875
No 9
>PRK06606 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=1.6e-57 Score=446.47 Aligned_cols=292 Identities=32% Similarity=0.537 Sum_probs=258.0
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|..++.+++.|++|+||||||||+|+|++.+|+. +|++++|++||.+||++|+|+.+ +.+.|.+.+.+++
T Consensus 9 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEtir~~~g~~~~~-~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i 87 (306)
T PRK06606 9 IWFNGELVPWEDAKVHVLTHALHYGTGVFEGIRAYDTPKGPA-IFRLREHTKRLFNSAKILRMEIPYSVDELMEAQREVV 87 (306)
T ss_pred EEECCEEEEhHHcccChhhhhhhhcceeEEEEEEecCCCCCe-eeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 799999999999999999999999999999999998877763 88999999999999999999976 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCC-CCeEEEEEEeecCccccC-C-CccEEEEeeccccccCCCC-CCCCC
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA-PEYTFLVFASPVGNYFKE-G-LAPLNLYVEDEFHRATPGG-AGGVK 239 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~-~~~~~~v~~~P~~~y~~~-g-~~pv~l~v~~~~~R~~p~g-~g~~K 239 (392)
+.+.. ...|||++++++.+.+|+.|. ..+.+++++.|.++|+.. + .+++++.+++ +.|..+.. ++.+|
T Consensus 88 ~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~K 159 (306)
T PRK06606 88 RKNNL-------KSAYIRPLVFVGDEGLGVRPHGLPTDVAIAAWPWGAYLGEEALEKGIRVKVSS-WTRHAPNSIPTRAK 159 (306)
T ss_pred HhcCC-------CCEEEEEEEEecCCccCcCCCCCCceEEEEEeccccccCcccccCCeEEEEee-EecCCCCCcCcchh
Confidence 98752 367999888766556677654 356778888887665432 1 2477777654 67776655 47899
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEE
Q 016272 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 319 (392)
Q Consensus 240 t~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~ 319 (392)
+.+||+.++++.++|+++|+||+|++|+ +|+|+|++++|||++++++|+||+++.+||+||||+.|+++|++.|++|+
T Consensus 160 ~~~nyl~~vla~~ea~~~G~de~l~l~~--~g~v~E~~~sNlf~v~~~~l~TP~~~~giL~GitR~~vl~~~~~~g~~v~ 237 (306)
T PRK06606 160 ASGNYLNSILAKTEARRNGYDEALLLDV--EGYVSEGSGENIFIVRDGVLYTPPLTSSILEGITRDTVITLAKDLGIEVI 237 (306)
T ss_pred hhhccHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCceEEEEEECCEEECCCCcCCcCCCHHHHHHHHHHHHcCCcEE
Confidence 8779999999999999999999999997 79999999999999999999999999999999999999999999999999
Q ss_pred EEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 016272 320 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 391 (392)
Q Consensus 320 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 391 (392)
|++++++||.+|||+|+|||+.+|+||.+| +++.+ +++ +||++++|++.|.+.+.++.+|.++|+++|
T Consensus 238 e~~i~~~eL~~AdevfltnS~~gi~PV~~i--d~~~~--~~g~~g~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
T PRK06606 238 ERRITRDELYIADEVFFTGTAAEVTPIREV--DGRQI--GNGKRGPITEKLQSAYFDIVRGRTEKYAHWLTPV 306 (306)
T ss_pred EEeCCHHHHhhCCEEEEcCCcceEEEEEEE--CcEEC--CCCCCCHHHHHHHHHHHHHHcCCCCCCCCCcccC
Confidence 999999999999999999999999999999 56654 666 799999999999999999999999999865
No 10
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2e-55 Score=427.49 Aligned_cols=277 Identities=39% Similarity=0.614 Sum_probs=242.1
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|.+++.+++.|+++|||++||||+|+|+ |+ +||+++|++||++||++|+||.+ +.+++......++
T Consensus 4 ~~~~g~~~~~~~~~~~~~~~~~~~g~~vFE~~r~~~---g~--~~~l~~H~~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~ 78 (284)
T COG0115 4 IWVNGELVPEEDAKLSVLDRGLHYGDGVFETLRAYN---GK--LFRLDEHLARLKRSAKRLGLPRPESEEEIELLIQLLL 78 (284)
T ss_pred EeECCEEccCcccccCcccceeccccceeEEEEEeC---Cc--ccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 799999999999999999999999999999999996 54 89999999999999999999998 5666655666665
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCC--ccEEEEeeccccccCCCCCCCCCcc
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGL--APLNLYVEDEFHRATPGGAGGVKAI 241 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~--~pv~l~v~~~~~R~~p~g~g~~Kt~ 241 (392)
+.+. |.+ .+|+||++++++..+|+.+..++.+.++++|+++|++.+. +++.+.+.+ ..|..|.+++..|.+
T Consensus 79 ~~~~-~~~-----~~y~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~k~ 151 (284)
T COG0115 79 AKNN-LVP-----GLYIRPLVRGGGGGLGVRDATEPTLIVAASPVGAYLKGGRLEKGVVLVISS-PVRRAPPGPGAAKKT 151 (284)
T ss_pred HhhC-CCC-----ceEEEEEEEeecCCCCcCCCCccEEEEEEEecccccCcccccCCeEEEEee-hhhccCCCcchhhhh
Confidence 5543 422 3999999999998899998888999999999999998763 566666553 455555544444444
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEE-CCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEE
Q 016272 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK-GNIISTPATSGTILAGITRKSIIEIASDCGFQVEE 320 (392)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~-~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~E 320 (392)
+||+++++++++|+++|++|+|++|. +|+|+|++++|+|+++ ||+++||+++.+||+||||++||++|+++|++|+|
T Consensus 152 ~~y~~~~~a~~~A~~~G~~eal~~~~--~G~V~Eg~~sNvf~v~~dg~~~TP~~~~~iL~GitR~~li~la~~~G~~v~E 229 (284)
T COG0115 152 GNYLSSVLAKREAKAAGADEALLLDE--DGYVTEGAGSNVFFVKGDGVLVTPPLSGGILPGITRDSLLELAKELGLTVEE 229 (284)
T ss_pred cccHHHHHHHHHHHHCCCCEEEEecC--CCeEEEcCcceEEEEEECCEEECCCCCCCccccHHHHHHHHHHHHcCceEEE
Confidence 69999999999999999999999997 7999999999999999 88999999999999999999999999999999999
Q ss_pred EeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHHhhccCC
Q 016272 321 RAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLI 381 (392)
Q Consensus 321 r~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~iq~g~~ 381 (392)
++|+.+||.+|||+|+|||+++|+||.+| +++ . ..+||+|++|++.|.++|+|..
T Consensus 230 ~~i~~~~l~~adevf~t~t~~~v~PV~~i--~~~-~---~~~gpit~~l~~~~~~~~~~~~ 284 (284)
T COG0115 230 RPITLEDLKQADEVFLTNTAAGVTPVGLI--DGR-V---GQPGPVTKKLRELLTDIQYGEI 284 (284)
T ss_pred eecCHHHHhhCCEEEEEccceEEEEEEEE--CCc-c---CCCChHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999 344 2 2289999999999999999863
No 11
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=100.00 E-value=7.8e-55 Score=422.29 Aligned_cols=277 Identities=50% Similarity=0.825 Sum_probs=243.7
Q ss_pred ccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCcc
Q 016272 98 ELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGS 177 (392)
Q Consensus 98 ~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~ 177 (392)
.+++.|++|+||||||||+|+|+..||+-++|++++|++||.+||++|+|+.++.++|.+.+.++++.|..|.|......
T Consensus 1 ~i~~~drg~~yGdgvFEtir~~~~~~g~g~~~~l~~Hl~RL~~sa~~l~i~~~~~~~l~~~i~~~i~~~~~~~~~~~~~~ 80 (279)
T cd01557 1 SLHPATHALHYGQAVFEGLKAYRTPDGKIVLFRPDENAERLNRSARRLGLPPFSVEEFIDAIKELVKLDADWVPYGGGAS 80 (279)
T ss_pred CcCccccHhhcChhheeeEEEEecCCCCEeEECHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCC
Confidence 47899999999999999999997656665689999999999999999999966999999999999999998877655567
Q ss_pred EEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhC
Q 016272 178 LYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNR 257 (392)
Q Consensus 178 lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~ 257 (392)
.|||+.++++...+|+.++.++.++++..|.++++....+++++.+. ++.|..|...+.+|+..||+.+++++++|+++
T Consensus 81 ~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~gv~l~~~-~~~r~~~~~~~~~K~~~nyl~~vla~~eA~~~ 159 (279)
T cd01557 81 LYIRPFIFGTDPQLGVSPALEYLFAVFASPVGAYFKGGEKGVSALVS-SFRRAAPGGPGAAKAGGNYAASLLAQKEAAEK 159 (279)
T ss_pred EEEEEEEEeccccCCcCCCCccEEEEEEEEccccccCCCCCeEEEEe-eEEcCCCCCCcccchhhccHHHHHHHHHHHHC
Confidence 99999887666667877656678888888887765433357777766 57788886677899866999999999999999
Q ss_pred CCceEEEEeCCCC-CeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeE
Q 016272 258 GFSDVLYLDSVNK-KNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFC 336 (392)
Q Consensus 258 G~de~L~ld~~~~-g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~ 336 (392)
|+||+|++|. + |+|+|++++|||++++++|+|||++.++|+||||+.|+++|+++|++|+|++++++||.+|||+|+
T Consensus 160 g~de~l~ld~--~~g~v~E~~~sNlf~v~~~~l~TP~~~~~~L~Gitr~~v~~~~~~~Gi~v~e~~i~~~~l~~ade~f~ 237 (279)
T cd01557 160 GYDQALWLDG--AHGYVAEVGTMNIFFVKDGELITPPLDGSILPGITRDSILELARDLGIKVEERPITRDELYEADEVFA 237 (279)
T ss_pred CCCEEEEEcC--CCCEEEEeCcEEEEEEECCEEEcCCCcCCCCCchHHHHHHHHHHHcCCeEEEEeCCHHHHhhCCEEEE
Confidence 9999999997 6 999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred EcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhcc
Q 016272 337 TGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTG 379 (392)
Q Consensus 337 tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g 379 (392)
|||+.+|+||.+| +++.+.++++ +||++++|++.|.++++|
T Consensus 238 ~ns~~gi~pV~~i--~~~~~~~~~~~~gp~~~~l~~~~~~~~~~ 279 (279)
T cd01557 238 TGTAAVVTPVGEI--DYRGKEPGEGEVGPVTKKLYDLLTDIQYG 279 (279)
T ss_pred ecceeEEEEEEEE--ccccccCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999 5665423445 799999999999998876
No 12
>PRK07544 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=9.1e-54 Score=417.25 Aligned_cols=275 Identities=28% Similarity=0.459 Sum_probs=235.7
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|..++.+++.|++|+||||||||+|+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.+++
T Consensus 11 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i 85 (292)
T PRK07544 11 IWMDGELVPWRDAKVHVLTHGLHYASSVFEGERAY---GGK--IFKLREHSERLRRSAELLDFEIPYSVAEIDAAKKETL 85 (292)
T ss_pred EEECCEEEEhHHCccChhhhHhhhcceeEEeeEee---CCc--ccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 555 78899999999999999999976 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCCC-CeEEEEEEeecCcccc--CCCccEEEEeeccccccCCCCC-CCCC
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYFK--EGLAPLNLYVEDEFHRATPGGA-GGVK 239 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~-~~~~~v~~~P~~~y~~--~g~~pv~l~v~~~~~R~~p~g~-g~~K 239 (392)
+.+.. ...|||+.++.+.+.+|+.++. ...++|...|.++++. .+.+++++.+++ +.|..|..+ +.+|
T Consensus 86 ~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~k 157 (292)
T PRK07544 86 AANGL-------TDAYVRPVAWRGSEMMGVSAQQNKIHLAIAAWEWPSYFDPEAKMKGIRLDIAK-WRRPDPETAPSAAK 157 (292)
T ss_pred HhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEeccccccCccccCCCEEEEEeE-EEcCCCCCcCHhhh
Confidence 98852 3568998877655556776543 3456666666554442 234578887664 677666554 5679
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEE
Q 016272 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 319 (392)
Q Consensus 240 t~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~ 319 (392)
+.|||+.+++++++|+++|+||+|++|. +|+|+|++++|+|+++|++|+||+++ ++|+||||+.|+++|+++|++|+
T Consensus 158 ~~~~yl~~vla~~~A~~~G~deal~ld~--~g~V~E~~~sNlf~v~~~~l~TP~~~-~~L~GItR~~vl~~a~~~g~~v~ 234 (292)
T PRK07544 158 AAGLYMICTISKHAAEAKGYADALMLDY--RGYVAEATGANIFFVKDGVIHTPTPD-CFLDGITRQTVIELAKRRGIEVV 234 (292)
T ss_pred hhcccHHHHHHHHHHHHcCCCeEEEECC--CCCEEEcCceEEEEEECCEEECCCCc-ccccchhHHHHHHHHHHcCCeEE
Confidence 8889999999999999999999999997 79999999999999999999999986 59999999999999999999999
Q ss_pred EEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHHhhccCC
Q 016272 320 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLI 381 (392)
Q Consensus 320 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~iq~g~~ 381 (392)
|++++++||.+|||+|+|||+++|+||.+| +++.+ + +||++++|++.|.+...++.
T Consensus 235 e~~i~~~eL~~adevfltnS~~gi~PV~~i--~~~~~--~--~g~~~~~l~~~~~~~~~~~~ 290 (292)
T PRK07544 235 ERHIMPEELAGFSECFLTGTAAEVTPVSEI--GEYRF--T--PGAITRDLMDDYEALVRPRA 290 (292)
T ss_pred EEecCHHHHhhcCceeecCccceEEEEEEE--eeEEe--C--CChHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999 46555 3 68999999999987665543
No 13
>PRK12479 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.3e-53 Score=417.64 Aligned_cols=273 Identities=27% Similarity=0.428 Sum_probs=237.7
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|..++.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.+++
T Consensus 6 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i 80 (299)
T PRK12479 6 IYMNGEFVEKEKAVVSVYDHGFLYGDGVFEGIRSY---GGN--VFCLKEHVKRLYESAKSILLTIPLTVDEMEEAVLQTL 80 (299)
T ss_pred EEECCEEeEHHHCccccccchhheeeeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 566 78899999999999999999876 7999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCcc----ccCCCccEEEEeeccccccCCCCC-C
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNY----FKEGLAPLNLYVEDEFHRATPGGA-G 236 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y----~~~g~~pv~l~v~~~~~R~~p~g~-g 236 (392)
+.+.. ...|||+.+.++++.+|+.|. .++.++|+..|.+.+ +.+ ++++.+. .+.|..|+.+ .
T Consensus 81 ~~~~~-------~~~~ir~~v~rg~g~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~---gv~~~~~-~~~r~~~~~~~~ 149 (299)
T PRK12479 81 QKNEY-------ADAYIRLIVSRGKGDLGLDPRSCVKPSVIIIAEQLKLFPQEFYDN---GLSVVSV-ASRRNTPDALDP 149 (299)
T ss_pred HHcCC-------CCeEEEEEEEecCCCCCCCCccCCCceEEEEEEEcccCChhHHhC---CeEEEEE-eEeccCCCccCc
Confidence 98752 356899887765556777654 345777888776432 333 4555554 3677777655 5
Q ss_pred CCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCC
Q 016272 237 GVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGF 316 (392)
Q Consensus 237 ~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~ 316 (392)
.+|+. ||+.+++++++|+++|+||+||+|. +|+|+|++++|||++++++|+|||++.++|+||||+.|+++++++|+
T Consensus 150 ~~K~~-nyl~~vla~~ea~~~g~de~l~ld~--~g~v~E~s~sNlf~v~~~~l~TP~l~~giL~GItR~~il~~~~~~g~ 226 (299)
T PRK12479 150 RIKSM-NYLNNVLVKIEAAQAGVLEALMLNQ--QGYVCEGSGDNVFVVKDGKVLTPPSYLGALEGITRNSVIELCERLSI 226 (299)
T ss_pred cchhh-hhHHHHHHHHHHHHcCCCEEEEEcC--CCcEEECCceEEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHcCC
Confidence 89996 9999999999999999999999997 79999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhccC
Q 016272 317 QVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGL 380 (392)
Q Consensus 317 ~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~ 380 (392)
+|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+...+.
T Consensus 227 ~v~e~~i~~~~L~~adevfltnS~~gi~PV~~i--d~~~~--~~~~~g~~~~~l~~~~~~~~~~~ 287 (299)
T PRK12479 227 PCEERPFTRHDVYVADEVFLTGTAAELIPVVKV--DSREI--GDGKPGSVTKQLTEEFKKLTRER 287 (299)
T ss_pred eEEEEeCCHHHHHhCCeeeeecCcccEEEEEEE--CCEEc--CCCCcCHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999 56665 665 7999999999998766553
No 14
>PRK08320 branched-chain amino acid aminotransferase; Reviewed
Probab=100.00 E-value=9.1e-53 Score=409.27 Aligned_cols=273 Identities=31% Similarity=0.472 Sum_probs=234.2
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|..++.+++.|++|+|||||||||+++ +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.+++
T Consensus 5 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~~v~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i 79 (288)
T PRK08320 5 IYLNGEFVPKEEAKVSVFDHGFLYGDGVFEGIRAY---NGR--VFRLKEHIDRLYDSAKAIMLEIPLSKEEMTEIVLETL 79 (288)
T ss_pred EEECCEEEEHHHCcccccchhhhhcceEEEEEEEE---CCE--eecHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999997 566 78899999999999999999776 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCccccC-CCccEEEEeeccccccCCCCC-CCCC
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKE-GLAPLNLYVEDEFHRATPGGA-GGVK 239 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y~~~-g~~pv~l~v~~~~~R~~p~g~-g~~K 239 (392)
+.+.. ...+||+.++++.+.+|+.|. .++.+++++.|.+++... -.+++++...+ +.|..+..+ .++|
T Consensus 80 ~~~~~-------~~~~iri~v~rg~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~r~~~~~~~~~~K 151 (288)
T PRK08320 80 RKNNL-------RDAYIRLVVSRGVGDLGLDPRKCPKPTVVCIAEPIGLYPGELYEKGLKVITVS-TRRNRPDALSPQVK 151 (288)
T ss_pred HhcCC-------CCEEEEEEEEECCCcCCCCcccCCCceEEEEEEEcCcCChhHHhcCeEEEEEe-eeccCCCCcCccch
Confidence 98752 357899888765556787664 355677777776543220 01344554443 567666555 6899
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEE
Q 016272 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 319 (392)
Q Consensus 240 t~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~ 319 (392)
+. ||+.+++++++|+++||||+|++|. +|+|+|++++|||++++|+|+|||++.++|+||||+.|+++|+++|++|+
T Consensus 152 ~~-nyl~~v~a~~~A~~~g~de~L~ld~--~g~v~E~s~sNlf~~~~~~l~TP~~~~~~L~GitR~~ll~~~~~~g~~v~ 228 (288)
T PRK08320 152 SL-NYLNNILAKIEANLAGVDEAIMLND--EGYVAEGTGDNIFIVKNGKLITPPTYAGALEGITRNAVIEIAKELGIPVR 228 (288)
T ss_pred hh-hhHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCcEEEEEEECCEEECCCCcCCCCcCHHHHHHHHHHHHcCCeEE
Confidence 96 9999999999999999999999997 79999999999999999999999999999999999999999999999999
Q ss_pred EEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhh
Q 016272 320 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQ 377 (392)
Q Consensus 320 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq 377 (392)
|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+..
T Consensus 229 e~~l~~~dL~~ade~f~~ns~~gv~pV~~i--~~~~~--~~~~~g~~~~~l~~~~~~~~ 283 (288)
T PRK08320 229 EELFTLHDLYTADEVFLTGTAAEVIPVVKV--DGRVI--GDGKPGPITKKLLEEFRELT 283 (288)
T ss_pred EEECCHHHHHhCCEEEEecChhhEEEEEEE--CCEEC--CCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 56654 665 7999999999997654
No 15
>PRK13356 aminotransferase; Provisional
Probab=100.00 E-value=9.4e-53 Score=408.98 Aligned_cols=269 Identities=27% Similarity=0.409 Sum_probs=226.9
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||++++.+.+.+++.|++|+||||||||+|+| +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.+++
T Consensus 9 ~~~nG~~~~~~~~~i~~~drg~~yGdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~i 83 (286)
T PRK13356 9 TFFDGEWHEGNVPIMGPADHAAWLGSTVFDGARAF---EGV--TPDLDLHCARVNRSAEALGLKPTVSAEEIEALAREGL 83 (286)
T ss_pred EEECCEEcchhhcccccccchhhhcceeEEEEEEe---cCC--CCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 455 67899999999999999999865 7999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEec-CCcccccCCC-CeEEEEEEeecCccccCCCccEEEEeeccccccCCCCC-CCCCc
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGS-GPILGLAPAP-EYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGA-GGVKA 240 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~-~~~lgv~p~~-~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~-g~~Kt 240 (392)
+.+.. ....|||+.+..+ +...|+.+.+ ...+.+...+.+.... +++++.++ ++.|..+..+ +++|+
T Consensus 84 ~~~~~------~~~~~ir~~v~rg~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~gv~l~~~-~~~r~~~~~~~~~~K~ 153 (286)
T PRK13356 84 KRFDP------DTALYIRPMYWAEDGFASGVAPDPESTRFALCLEEAPMPEP---TGFSLTLS-PFRRPTLEMAPTDAKA 153 (286)
T ss_pred HHcCC------CCcEEEEEEEEeccCcccCcCCCcCCceEEEEEEccCCCCC---CcEEEEEe-eeecCCCCCCCcccee
Confidence 98752 2357999877644 3323444432 2334444444332222 45777765 4677666543 67898
Q ss_pred cCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEE
Q 016272 241 ISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEE 320 (392)
Q Consensus 241 ~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~E 320 (392)
.+||+.+++++++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|++.|++|+|
T Consensus 154 ~~nyl~~vla~~ea~~~g~deal~ld~--~G~v~E~~~sNlf~v~~~~l~TP~~~~~~L~GItR~~vi~~a~~~gi~v~e 231 (286)
T PRK13356 154 GCLYPNNARALREARSRGFDNALVLDM--LGNVAETATSNVFMVKDGVVFTPVPNGTFLNGITRQRVIALLREDGVTVVE 231 (286)
T ss_pred ccchHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCceEEEEEECCEEEcCCCCCCcccCHHHHHHHHHHHHcCCeEEE
Confidence 889999999999999999999999997 799999999999999999999999999999999999999999999999999
Q ss_pred EeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHHh
Q 016272 321 RAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGI 376 (392)
Q Consensus 321 r~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~i 376 (392)
++++++||.+|||+|+|||+.+|+||.+| +++.+ + +||++++|++.|.+.
T Consensus 232 ~~i~~~eL~~adevfltns~~gi~PV~~i--d~~~~--~--~g~~~~~l~~~~~~~ 281 (286)
T PRK13356 232 TTLTYEDFLEADEVFSTGNYSKVVPVTRF--DDRSL--Q--PGPVTRRARELYWDW 281 (286)
T ss_pred EecCHHHHHhcCceEEecChheEEEEEEE--CCEEe--c--CChHHHHHHHHHHHH
Confidence 99999999999999999999999999999 57765 3 589999999998753
No 16
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.
Probab=100.00 E-value=2.8e-52 Score=401.87 Aligned_cols=265 Identities=28% Similarity=0.432 Sum_probs=224.1
Q ss_pred EeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHH
Q 016272 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164 (392)
Q Consensus 86 w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv~ 164 (392)
|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+||.+ +.+.+.+.+.++++
T Consensus 1 ~~nG~~~~~~~~~i~~~d~g~~~G~gvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~ 75 (270)
T cd01558 1 YLNGEYVPREEAKVSVFDRGFLFGDGVYEVIRVY---NGK--PFALDEHLDRLYRSAKELRIDIPYTREELKELIRELVA 75 (270)
T ss_pred CcCCeEeEHHHCccccccchhcccceEEEEEEEE---CCE--EecHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999998 566 78899999999999999999865 88999999999999
Q ss_pred HcCCCCCCCCCccEEEEEEEEecCCcccccC--CCCeEEEEEEeecCccccCC-CccEEEEeeccccccCCCCCCCCCcc
Q 016272 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAP--APEYTFLVFASPVGNYFKEG-LAPLNLYVEDEFHRATPGGAGGVKAI 241 (392)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p--~~~~~~~v~~~P~~~y~~~g-~~pv~l~v~~~~~R~~p~g~g~~Kt~ 241 (392)
.+.. ..+.+|+|+ ++|.++ .|+.+ ...+.++++..|.++++... .+++++.+.+ +.|. ..+++|+.
T Consensus 76 ~~~~-----~~~~~~~~~-t~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~-~~~~---~~~~~K~~ 144 (270)
T cd01558 76 KNEG-----GEGDVYIQV-TRGVGP-RGHDFPKCVKPTVVIITQPLPLPPAELLEKGVRVITVP-DIRW---LRCDIKSL 144 (270)
T ss_pred HcCC-----CCceEEEEE-EeCCCc-cCCCCCCCCCCEEEEEEEecCCCChhhhhcCeEEEEec-cccc---CCCCchhh
Confidence 8752 246788886 566553 45444 23456777777765322100 1356665553 3443 34589996
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEE
Q 016272 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 321 (392)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er 321 (392)
||+.+++++++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|+++|++|+|+
T Consensus 145 -ny~~~~~a~~~a~~~g~de~l~ld~--~g~v~E~~~sNif~~~~~~l~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e~ 221 (270)
T cd01558 145 -NLLNNVLAKQEAKEAGADEAILLDA--DGLVTEGSSSNVFIVKNGVLVTPPLDNGILPGITRATVIELAKELGIPVEER 221 (270)
T ss_pred -ccHHHHHHHHHHHHcCCCEEEEEcC--CCEEEEcCcEEEEEEECCEEECCCCcCCCCCChHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred eeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHH
Q 016272 322 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTL 373 (392)
Q Consensus 322 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l 373 (392)
.++++||.+|||+|+|||+++|+||.+| +++.+ +++ .||++++|++.|
T Consensus 222 ~i~~~eL~~ade~fl~ns~~gv~PV~~i--~~~~~--~~~~~~~~~~~l~~~~ 270 (270)
T cd01558 222 PFSLEELYTADEVFLTSTTAEVMPVVEI--DGRPI--GDGKPGPVTKRLREAY 270 (270)
T ss_pred eCCHHHHhhCCEEEEecCcccEEEEEEE--CCeEC--CCCCCCHHHHHHHHhC
Confidence 9999999999999999999999999999 56654 555 799999998754
No 17
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=7e-52 Score=402.19 Aligned_cols=271 Identities=24% Similarity=0.337 Sum_probs=231.5
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.+++
T Consensus 2 ~~~nG~~~~~~~~~v~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~l~~~~ 76 (283)
T PRK07650 2 IYVNGQYVEEEEARISPFDHGYLYGLGVFETFRIY---NGH--PFLLDDHYDRLNDALDTLQIEWTMTKDEVLLILKNLL 76 (283)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EEcHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 59999999999999999999999999999999998 566 67899999999999999999976 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCccc-cCCCccEEEEeeccccccCCCCCCCCCc
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYF-KEGLAPLNLYVEDEFHRATPGGAGGVKA 240 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y~-~~g~~pv~l~v~~~~~R~~p~g~g~~Kt 240 (392)
+.+.. ...|||+.+..+.+.+|+.+. ..+.++++..|.++.. .....++.+ .+.|..|+.+.++|+
T Consensus 77 ~~~~~-------~~~~iRl~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Kt 145 (283)
T PRK07650 77 EKNGL-------ENAYVRFNVSAGIGEIGLQTEMYEEPTVIVYMKPLAPPGLPAEKEGVVL----KQRRNTPEGAFRLKS 145 (283)
T ss_pred HhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEEcCCCCChhhcCeEEEE----EEEecCCCCCcchhH
Confidence 88752 357899887665445566543 3567888888864322 111122222 345666777889999
Q ss_pred cCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEE
Q 016272 241 ISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEE 320 (392)
Q Consensus 241 ~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~E 320 (392)
. ||..+++++++|+++|+||+|++|. +|+|+|++++|||++++|+|+|||++.++|+||||+.||++|++.|++|+|
T Consensus 146 ~-~y~~~v~a~~~a~~~g~de~llln~--~G~v~E~s~sNif~v~~g~l~TP~l~~g~L~GitR~~li~~~~~~g~~v~e 222 (283)
T PRK07650 146 H-HYLNNILGKREIGNDPNKEGIFLTE--EGYVAEGIVSNLFWVKGDIVYTPSLETGILNGITRAFVIKVLEELGIEVKE 222 (283)
T ss_pred H-hHHHHHHHHHHHHHcCCCeEEEECC--CCeEEEcCceEEEEEECCEEEcCCCcCCCcccHHHHHHHHHHHHcCCeEEE
Confidence 6 9999999999999999999999997 799999999999999999999999999999999999999999999999999
Q ss_pred EeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHHhhc
Q 016272 321 RAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQT 378 (392)
Q Consensus 321 r~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~iq~ 378 (392)
+.++++||.+|||+|+|||+++|+||.+| +++.+ +..+||++++|+++|.+...
T Consensus 223 ~~i~~~dL~~adeifl~ns~~gv~pV~~i--~~~~~--~g~~g~~~~~l~~~~~~~~~ 276 (283)
T PRK07650 223 GFYTKEELLSADEVFVTNSIQEIVPLTRI--EERDF--PGKVGMVTKRLQNLYEMQRE 276 (283)
T ss_pred EecCHHHHhhCCEeeeecCcccEEEEEEE--CCEEe--CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 57765 42379999999999976443
No 18
>PRK06680 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=3e-51 Score=398.53 Aligned_cols=271 Identities=23% Similarity=0.354 Sum_probs=226.0
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|..++.+++.|++|+||||+|||+|+| +|+ +|++++|++||.+||++|+||.+ +.+.+.+.+.+++
T Consensus 5 ~~~nG~~~~~~~~~i~~~drg~~yGdGvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~~ 79 (286)
T PRK06680 5 AYVNGRYVNHREARVHIEDRGFQFADGIYEVCAVR---DGK--LVDLDRHLARLFRSLGEIRIAPPMTRAELVEVLRELI 79 (286)
T ss_pred EEECCEEEEHHHCcccccccccceeeEEEEEEEEE---CCE--EechHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 666 67889999999999999999976 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCccccc-C--CCCeEEEEEEeecCccccC--CCccEEEEeeccccccCCCCCCCC
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLA-P--APEYTFLVFASPVGNYFKE--GLAPLNLYVEDEFHRATPGGAGGV 238 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~-p--~~~~~~~v~~~P~~~y~~~--g~~pv~l~v~~~~~R~~p~g~g~~ 238 (392)
+.+.. ..+.+|+++ .+|.+. .|.. | ..++.++|++.|.++|... -.+++++.+.+. .| ....++
T Consensus 80 ~~~~~-----~~~~lr~~v-trG~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~~~~~~~-~~---~~~~~~ 148 (286)
T PRK06680 80 RRNRV-----REGLVYLQV-TRGVAR-RDHVFPAADVKPSVVVFAKSVDFARPAAAAETGIKVITVPD-NR---WKRCDI 148 (286)
T ss_pred HHcCC-----CceEEEEEE-EeCCCC-CCCCCCCCCCCcEEEEEEEeccccCChhHHhCCeEEEEecC-CC---CCCCCc
Confidence 98753 234455542 345443 3433 3 2456788888887652111 013555554432 22 234679
Q ss_pred CccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEE-ECCEEEcCCCCCCcccchHHHHHHHHHHHCCCc
Q 016272 239 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFIL-KGNIISTPATSGTILAGITRKSIIEIASDCGFQ 317 (392)
Q Consensus 239 Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v-~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~ 317 (392)
|+. ||+.++++.++|+++|+||+|++| +|+|+|++++|+|++ ++++|+|||++.+||+||||+.|+++|++.|++
T Consensus 149 Ks~-nyl~~vla~~eA~~~g~dd~l~ld---~g~v~E~~~sN~f~~~~~~~l~TP~~~~~iL~Gitr~~il~~a~~~g~~ 224 (286)
T PRK06680 149 KSV-GLLPNVLAKQAAKEAGAQEAWMVD---DGFVTEGASSNAWIVTKDGKLVTRPADNFILPGITRHTLIDLAKELGLE 224 (286)
T ss_pred chh-ccHHHHHHHHHHHHCCCCEEEEec---CCEEEEcCcEEEEEEEECCEEEeCCCCCCCCcCHHHHHHHHHHHHcCCe
Confidence 997 899999999999999999999998 489999999999999 999999999999999999999999999999999
Q ss_pred EEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhcc
Q 016272 318 VEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTG 379 (392)
Q Consensus 318 V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g 379 (392)
|+|++++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+...+
T Consensus 225 v~e~~i~~~el~~ade~f~~ns~~gi~pV~~i--d~~~~--~~~~~g~~~~~L~~~~~~~~~~ 283 (286)
T PRK06680 225 VEERPFTLQEAYAAREAFITAASSFVFPVVQI--DGKQI--GNGKPGPIAKRLREAYEEFARL 283 (286)
T ss_pred EEEEcCCHHHHhcCcEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 56654 555 799999999999775543
No 19
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase. Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached.
Probab=100.00 E-value=4.7e-51 Score=395.18 Aligned_cols=264 Identities=23% Similarity=0.382 Sum_probs=217.9
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|.+++.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.|.+++
T Consensus 2 ~~~nG~~~~~~~~~i~~~drgl~yGdgvFEtir~~---~g~--~~~l~~H~~RL~~Sa~~l~i~~~~~~~~l~~~i~~~~ 76 (276)
T TIGR01121 2 VLWNGQLVEREEAKIDIEDRGYQFGDGVYEVIRVY---NGK--LFTVNEHIDRLYASAAKIRIDIPYTKEELHQLLHELV 76 (276)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 59999999999999999999999999999999998 565 78899999999999999999865 7999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCccccc-CC--CCeEEEEEEeecCc---cccCCCccEEEEeeccccccCCCCCCC
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLA-PA--PEYTFLVFASPVGN---YFKEGLAPLNLYVEDEFHRATPGGAGG 237 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~-p~--~~~~~~v~~~P~~~---y~~~g~~pv~l~v~~~~~R~~p~g~g~ 237 (392)
+.+.. ..+.+|+.+ .+|.++ .|.. |. ..+.++++..|.+. .+.. ++++.+... .|. ..++
T Consensus 77 ~~~~~-----~~~~irl~~-~rg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---gv~~~~~~~-~~~---~~~~ 142 (276)
T TIGR01121 77 EKNNL-----NTGHVYFQV-TRGVAP-RNHQFPAGTVKPVITAYTKEVPRPEENLEK---GVKAITVED-IRW---LRCD 142 (276)
T ss_pred HhcCC-----CceEEEEEE-EcCCCC-cCCCCCCCCCCcEEEEEEecccCChhHHhc---CeEEEEecC-CCc---cCCC
Confidence 98753 234445442 344432 2333 22 23455666666542 1233 444433322 222 2367
Q ss_pred CCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCc
Q 016272 238 VKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQ 317 (392)
Q Consensus 238 ~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~ 317 (392)
+|+. ||+.+++++++|+++|+||+|+++ +|+|+|++++|||++++++|+|||++.++|+||||+.|+++|+++|++
T Consensus 143 ~K~~-nyl~~vla~~eA~~~g~de~l~~~---~g~v~E~~~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~a~~~g~~ 218 (276)
T TIGR01121 143 IKSL-NLLGNVLAKQEAHEKGAYEAILHR---GGTVTEGSSSNVYGIKDGVLYTHPANNLILNGITRMVILACAEENGIP 218 (276)
T ss_pred cchh-hhHHHHHHHHHHHHcCCCEEEEec---CCeEEecCceeEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHCCCe
Confidence 9986 999999999999999999999995 589999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHH
Q 016272 318 VEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVG 375 (392)
Q Consensus 318 V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~ 375 (392)
|+|++++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+
T Consensus 219 v~e~~i~~~el~~ade~fltns~~gi~PV~~i--d~~~~--~~~~~g~~~~~L~~~~~~ 273 (276)
T TIGR01121 219 VKEEPFTKEELLNADEVFVSSTTAEITPVIEI--DGQQI--GDGKPGPWTRQLQKAFEE 273 (276)
T ss_pred EEEEeCCHHHHhcCCEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 46654 665 79999999998864
No 20
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein
Probab=100.00 E-value=8.1e-51 Score=403.59 Aligned_cols=272 Identities=22% Similarity=0.290 Sum_probs=227.5
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|.+++.+++.|++|+||||+||||+++ +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.+++
T Consensus 43 ~~~nG~~v~~~~a~i~~~Drgl~~GdGvFETirv~---~G~--~~~le~Hl~RL~~Sa~~L~i~~p~~~~~l~~~i~~~i 117 (336)
T PLN02845 43 SVVGGITTDPAAMVIPLDDHMVHRGHGVFDTATIR---DGH--LYELDAHLDRFLRSAAKAKIPLPFDRATLRRILLQTV 117 (336)
T ss_pred EEECCEEccHHHCcccccccceeecceEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999997 566 78899999999999999999876 8899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccC--CCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCcc
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAP--APEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAI 241 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p--~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~ 241 (392)
+.+.. ...+||+.+..+.+.+++.+ ...+.++++..|.+.+.. ..+++++.+.+ +.|. +..+.++|+.
T Consensus 118 ~~~~~-------~~~~irl~vtrG~g~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~gv~l~~~~-~~~~-~~~~~~~Kt~ 187 (336)
T PLN02845 118 AASGC-------RNGSLRYWLSAGPGGFSLSPSGCSEPAFYAVVIEDTYAQD-RPEGVKVVTSS-VPIK-PPQFATVKSV 187 (336)
T ss_pred HhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEcccccccc-ccCCeEEEEee-eeec-CCccccchhh
Confidence 98752 24567765543333445543 345677777776542221 12456666554 4453 3346789996
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEE-CCEEEcCCCCCCcccchHHHHHHHHHHHC---C--
Q 016272 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK-GNIISTPATSGTILAGITRKSIIEIASDC---G-- 315 (392)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~-~~~l~TPpl~~~IL~GITR~~il~la~~~---G-- 315 (392)
||+.+++++++|+++|+||+|++|. +|+|+|++++||||++ +++|+|||++ +||+||||+.||++|+++ |
T Consensus 188 -nyl~~vla~~eA~~~G~deaLlln~--~G~V~Egt~sNiF~v~~~~~l~TP~l~-~iL~GItR~~vlela~~~~~~G~~ 263 (336)
T PLN02845 188 -NYLPNALSQMEAEERGAFAGIWLDE--EGFVAEGPNMNVAFLTNDGELVLPPFD-KILSGCTARRVLELAPRLVSPGDL 263 (336)
T ss_pred -hhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCcceEEEEEECCEEEeCCCC-CcCccHHHHHHHHHHHhhhccCCc
Confidence 9999999999999999999999997 7999999999999884 9999999997 599999999999999986 8
Q ss_pred CcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhcc
Q 016272 316 FQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTG 379 (392)
Q Consensus 316 ~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g 379 (392)
++|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+....
T Consensus 264 i~V~E~~i~~~eL~~AdEvFltnS~~gv~PV~~i--d~~~~--~~g~~gp~t~~L~~~~~~~~~~ 324 (336)
T PLN02845 264 RGVKQRKISVEEAKAADEMMLIGSGVPVLPIVSW--DGQPI--GDGKVGPITLALHDLLLDDMRS 324 (336)
T ss_pred eEEEEEecCHHHHhcCCEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999 57665 666 799999999999775543
No 21
>PRK12400 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=9e-51 Score=395.86 Aligned_cols=264 Identities=20% Similarity=0.317 Sum_probs=216.3
Q ss_pred eEeCCeeeeCCC--cccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGK--IELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQ 161 (392)
Q Consensus 85 ~w~~g~i~p~~~--~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~ 161 (392)
.|.||+++|.++ +.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.| +.+++.+.+.+
T Consensus 7 ~~~ng~~v~~~~~~~~i~~~drgl~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~l~~~l~~ 81 (290)
T PRK12400 7 VLWNDAVIDTTKQKTYIELEERGLQFGDGVYEVIRLY---KGN--FHLLDPHITRLYRSMEEIELTLPFSKAELITLLYK 81 (290)
T ss_pred EEECCEEechHHcCceeccccchhhhcceEEEEEEEE---CCE--ecccHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 799999999994 55999999999999999999998 566 67789999999999999999976 78899999999
Q ss_pred HHHHcCCCCCCCCCccEEEEEEEE-ecCCcccccCC--CCeEEEEEEeecCc---cccCCCccEEEEeeccccccCCCCC
Q 016272 162 TALANKRWVPPPGKGSLYIRPLLV-GSGPILGLAPA--PEYTFLVFASPVGN---YFKEGLAPLNLYVEDEFHRATPGGA 235 (392)
Q Consensus 162 lv~~~~~~vp~~~~~~lyIRp~~~-g~~~~lgv~p~--~~~~~~v~~~P~~~---y~~~g~~pv~l~v~~~~~R~~p~g~ 235 (392)
+++.+.. ....+||+.+. |.+ ..|..++ ..++++++..|.+. +.. +++++...+. .|...
T Consensus 82 ~~~~~~~------~~~~~iri~v~rG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~----~~~~~ 147 (290)
T PRK12400 82 LIENNNF------HEDGTIYLQVSRGVQ-ARTHTFSYDVPPTIYAYITKKERPALWIE---YGVRAISEPD----TRWLR 147 (290)
T ss_pred HHHhcCC------CCCEEEEEEEEeCCC-CCCCCCCCCCCcEEEEEEecccCchhHHh---cCcEEEECCC----CCccC
Confidence 9998752 12345555443 433 3344432 33456665554321 122 3444443221 12234
Q ss_pred CCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCC
Q 016272 236 GGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCG 315 (392)
Q Consensus 236 g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G 315 (392)
.++|+. ||+.+++++++|+++|+||+|++| +|+|+|++++|||+++|++|+|||++.++|+||||+.||++|++.|
T Consensus 148 ~~~Kt~-nyl~~vla~~ea~~~g~deaL~l~---~g~v~E~t~sNif~v~~~~l~TPpl~~g~L~GItR~~llela~~~g 223 (290)
T PRK12400 148 CDIKSL-NLLPNILAATKAERKGCKEALFVR---NGTVTEGSHSNFFLIKNGTLYTHPANHLILNGIIRQYVLSLAKTLR 223 (290)
T ss_pred CCCccc-ccHHHHHHHHHHHHcCCCEEEEEc---CCEEEEcCceEEEEEECCEEEeCCCCCCcCcCHHHHHHHHHHHHcC
Confidence 578996 999999999999999999999996 5899999999999999999999999999999999999999999999
Q ss_pred CcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHH
Q 016272 316 FQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVG 375 (392)
Q Consensus 316 ~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~ 375 (392)
++|+|+.++++||.+|||+|+|||+.+|+||.+| +++.+ +++ +||++++|++.|.+
T Consensus 224 i~v~E~~i~~~eL~~Adevfltns~~gv~PV~~i--~~~~~--~~~~~g~~t~~l~~~~~~ 280 (290)
T PRK12400 224 IPVQEELFSVRDVYQADECFFTGTTIEILPMTHL--DGTAI--QDGQVGPITKMLQRSFSQ 280 (290)
T ss_pred CcEEEEeCCHHHHHhCCeeeEccCcceEEEEEEE--CCEEC--CCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 56654 666 79999999999865
No 22
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=1.7e-50 Score=394.31 Aligned_cols=267 Identities=22% Similarity=0.285 Sum_probs=224.0
Q ss_pred eEeCC-----eeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Q 016272 85 YFEKG-----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAV 159 (392)
Q Consensus 85 ~w~~g-----~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i 159 (392)
+|.|| +++|.+++.+++.|++|+||||+||||+++ +|+ +|.+++|++||.+||++|+|+.++.+.|.+++
T Consensus 9 ~~~ng~~~~~~~~~~~~a~i~~~drg~~~GdgvFEt~rv~---~g~--i~~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~i 83 (292)
T PRK07849 9 VTLDPYGGSERVHDPSAPLLHADDLAAVRGDGVFETLLVR---DGR--PCNLEAHLERLARSAALLDLPEPDLDRWRRAV 83 (292)
T ss_pred EEECCCCccceEechHHCCccchhcchhccceEEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 79999 999999999999999999999999999998 566 66789999999999999999998889999999
Q ss_pred HHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccc-cCCCccEEEEeecc-----ccccCCC
Q 016272 160 KQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF-KEGLAPLNLYVEDE-----FHRATPG 233 (392)
Q Consensus 160 ~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~-~~g~~pv~l~v~~~-----~~R~~p~ 233 (392)
.++++.+.. . ....+||+++..+.... ..+.+++.+.|.+++. ....+++++.+.+. +.+..|.
T Consensus 84 ~~~v~~~~~---~--~~~~~iRl~v~~g~~~~-----~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~p~ 153 (292)
T PRK07849 84 ELAIEEWRA---P--EDEAALRLVYSRGRESG-----GAPTAWVTVSPVPERVARARREGVSVITLDRGYPSDAAERAPW 153 (292)
T ss_pred HHHHHHhcC---C--CCCeEEEEEEeCCCCCC-----CCCeEEEEEeecCccchhhccCCeEEEEEeccccCcccccCcc
Confidence 999987631 0 13557886654322211 2456778888765331 11124566665431 1233465
Q ss_pred CCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHH
Q 016272 234 GAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASD 313 (392)
Q Consensus 234 g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~ 313 (392)
.+.++|+. ||..++++.++|+++|+||+|++|. +|+|+|++++|||+++|++|+||+++.++|+||||+.||++|++
T Consensus 154 ~~~~~Kt~-ny~~~i~a~~~A~~~g~dd~L~ld~--~G~v~E~s~~Nif~~~~g~l~TP~~~~giL~GItR~~vie~~~~ 230 (292)
T PRK07849 154 LLAGAKTL-SYAVNMAALRYAARRGADDVIFTST--DGYVLEGPTSTVVIATDDRLLTPPPWYGILPGTTQAALFEVARE 230 (292)
T ss_pred cccccchh-hhHHHHHHHHHHHHcCCCEEEEEcC--CCcEEECCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHH
Confidence 67889996 9999999999999999999999997 79999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHH
Q 016272 314 CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVG 375 (392)
Q Consensus 314 ~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~ 375 (392)
+|++|+||.++++||.+|||+|+|||+++|+||.+| +++.+ + .||++++|++.|.+
T Consensus 231 ~g~~v~er~i~~~eL~~Adevfltns~~gi~pV~~i--d~~~~--~--~~~~~~~l~~~~~~ 286 (292)
T PRK07849 231 KGWDCEYRALRPADLFAADGVWLVSSVRLAARVHTL--DGRPL--P--RDPLADELTELVDA 286 (292)
T ss_pred cCCceEEEECCHHHHhhCCEEEEecCcceEEEEEEE--CCEEC--C--CChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 57665 4 47999999998864
No 23
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase. Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063).
Probab=100.00 E-value=4e-50 Score=385.23 Aligned_cols=257 Identities=26% Similarity=0.364 Sum_probs=214.8
Q ss_pred EeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Q 016272 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA 165 (392)
Q Consensus 86 w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~ 165 (392)
|.||++ ++.+++.|++|+||+|+|||||++ +|+ +|++++|++||.+||++|+||.++.+++.+.+.++++.
T Consensus 1 ~~nG~~----~~~i~~~d~g~~~G~gvFEt~r~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~~~~~~~~ 71 (261)
T TIGR03461 1 WVNGVL----QTQISVSDRGLQYGDGCFTTAKVR---NGK--IELLDLHLERLQDAAARLGIPLPDWDALREEMAQLAAG 71 (261)
T ss_pred CcCCcc----cCccCcccccccccceeEEEEEEE---CCE--eccHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHh
Confidence 788984 778999999999999999999997 666 77889999999999999999988899999999999987
Q ss_pred cCCCCCCCCCccEEEEEEEEecCCcccccC--CCCeEEEEEEeecCccccCC-CccEEEEeeccccccCCCCCCCCCccC
Q 016272 166 NKRWVPPPGKGSLYIRPLLVGSGPILGLAP--APEYTFLVFASPVGNYFKEG-LAPLNLYVEDEFHRATPGGAGGVKAIS 242 (392)
Q Consensus 166 ~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p--~~~~~~~v~~~P~~~y~~~g-~~pv~l~v~~~~~R~~p~g~g~~Kt~~ 242 (392)
+. ..+||+.+..+....|+.+ ...+.++++..|.++++... .+++++.+.+ ..+..+..+.++|+.
T Consensus 72 ~~---------~~~ir~~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~Kt~- 140 (261)
T TIGR03461 72 YS---------LGVLKVIISRGSGGRGYSPPGCSDPTRIISVSPYPAHYSAWQQQGIRLGVSP-VRLGRNPLLAGIKHL- 140 (261)
T ss_pred CC---------CeEEEEEEecCCCCCCCCCCCCCCCcEEEEeccCcccChhHhcCCEEEEEec-cccCCCCCCcCcccc-
Confidence 52 2456655543222234433 34456777777776544321 2466777664 344444457789996
Q ss_pred ChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEe
Q 016272 243 NYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERA 322 (392)
Q Consensus 243 nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~ 322 (392)
||+.+++++++|+++|+||+|++|+ +|+|+|++++|||+++|++|+||+++.++|+||||+.||++|++.|++|+|+.
T Consensus 141 ~y~~~~~a~~~A~~~g~de~llln~--~g~v~E~s~sNif~~~~~~l~TP~~~~~~L~GItR~~il~~~~~~g~~v~E~~ 218 (261)
T TIGR03461 141 NRLEQVLIKAELENSEADEALVLDT--DGNVVECTAANIFWRKGNQVFTPDLSYCGVAGVMRQHVLALLPALGYEIEEVK 218 (261)
T ss_pred ccHHHHHHHHHhhhcCCCEEEEECC--CCCEEEeccEEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEEe
Confidence 9999999999999999999999997 79999999999999999999999998899999999999999999999999999
Q ss_pred eCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHH
Q 016272 323 IPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELY 370 (392)
Q Consensus 323 i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~ 370 (392)
++++||.+|||+|+|||+++|+||.+| +++.+ + +||++++|+
T Consensus 219 i~~~eL~~ade~f~~ns~~gi~pV~~i--d~~~~--~--~~~~~~~l~ 260 (261)
T TIGR03461 219 AGLEELLSADEVFITNSLMGVVPVNAI--GETSY--P--SRTLTRLLQ 260 (261)
T ss_pred cCHHHHhhCCEEEEeCCccceEEEEEE--CCEEe--c--chHHHHHhh
Confidence 999999999999999999999999999 57665 4 479998874
No 24
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=100.00 E-value=9e-50 Score=384.36 Aligned_cols=262 Identities=24% Similarity=0.315 Sum_probs=216.6
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~ 164 (392)
.|.||++ .+.+++.|++|+||||+||||+++ +|+ +|++++|++||.+||++|+||.++.+.+.+.+.+++.
T Consensus 2 ~~~nG~~----~~~i~~~d~g~~~GdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~l~~~~~ 72 (268)
T PRK06092 2 FWINGQP----QESLSVSDRSTQYGDGCFTTARVR---DGQ--VSLLSRHLQRLQDACERLAIPLDDWAQLEQEMKQLAA 72 (268)
T ss_pred EEECCcC----cCccCccccccccccceeeEEEEE---CCe--eccHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence 5888985 578999999999999999999997 666 6778999999999999999998877888888887773
Q ss_pred HcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCccccCC-CccEEEEeeccccccCCCCCCCCCcc
Q 016272 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKEG-LAPLNLYVEDEFHRATPGGAGGVKAI 241 (392)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y~~~g-~~pv~l~v~~~~~R~~p~g~g~~Kt~ 241 (392)
.. ...+||+.+..+....|+.++ ..+.++++..|++++..+. .+++++.+++ ..+..+..+.++|+.
T Consensus 73 ~~---------~~~~iri~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~l~~~~-~~~~~~~~~~~~Kt~ 142 (268)
T PRK06092 73 EL---------ENGVLKVIISRGSGGRGYSPAGCAAPTRILSVSPYPAHYSRWREQGITLALCP-TRLGRNPLLAGIKHL 142 (268)
T ss_pred hC---------CCeEEEEEEEccCCCCCCCCCCCCCCeEEEEeccCCccChhHhhCCEEEEEec-cccCCCCCccCcchh
Confidence 21 234566555433334555543 3457778888876544311 2467777665 333333456789996
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEE
Q 016272 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 321 (392)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er 321 (392)
||+.+++++++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|+++|++|+|+
T Consensus 143 -ny~~~~~a~~~A~~~g~de~l~l~~--~g~v~E~s~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~~~~~g~~v~e~ 219 (268)
T PRK06092 143 -NRLEQVLIRAELEQTEADEALVLDS--EGWVIECCAANLFWRKGGVVYTPDLDQCGVAGVMRQFILELLAQSGYPVVEV 219 (268)
T ss_pred -hhHHHHHHHHHHHhcCCCEEEEECC--CCCEEEccceEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999888999999999999999999999999
Q ss_pred eeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHH
Q 016272 322 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLV 374 (392)
Q Consensus 322 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~ 374 (392)
.++++||.+|||+|+|||+++|+||.+| +++.+ + +||++++|++.+.
T Consensus 220 ~i~~~dL~~adevfltns~~gi~pV~~i--d~~~~--~--~g~~~~~l~~~~~ 266 (268)
T PRK06092 220 DASLEELLQADEVFICNSLMPVWPVRAI--GETSY--S--SGTLTRYLQPLCE 266 (268)
T ss_pred ECCHHHHhhCCEEEEeCCcceEEEEEEE--CCEEc--c--chHHHHHHHHHHh
Confidence 9999999999999999999999999999 56665 3 5899999998875
No 25
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=100.00 E-value=2e-49 Score=378.35 Aligned_cols=252 Identities=44% Similarity=0.661 Sum_probs=215.0
Q ss_pred CccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCC-CCHHHHHHHHHHHHHHcCCCCCCCCCccEEEE
Q 016272 103 SGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPS-PSIDQFIDAVKQTALANKRWVPPPGKGSLYIR 181 (392)
Q Consensus 103 ~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~-~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIR 181 (392)
|++|+||||+||||+++ +|+ +|++++|++||.+||++|+|+. ++.+.+.+.+.++++.+. ....+||
T Consensus 1 drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~sa~~l~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~ir 68 (256)
T cd00449 1 DRGLHYGDGVFEGLRAG---KGR--LFRLDEHLDRLNRSAKRLGLPIPYDREELREALKELVAANN-------GASLYIR 68 (256)
T ss_pred CceeeccceEEEEEEEc---CcE--EEChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCC-------CCCEEEE
Confidence 68999999999999996 666 7788999999999999999994 589999999999999864 2467899
Q ss_pred EEEEecCCcccccC--CCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCC
Q 016272 182 PLLVGSGPILGLAP--APEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGF 259 (392)
Q Consensus 182 p~~~g~~~~lgv~p--~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~ 259 (392)
+.+.++...+|..+ ..++.+++++.|.+++.....+++++.+.+...++.+..+.++|+. ||+.++++.++|+++|+
T Consensus 69 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Kt~-~~~~~~~a~~~a~~~g~ 147 (256)
T cd00449 69 PLLTRGVGGLGVAPPPSPEPTFVVFASPVGAYAKGGEKGVRLITSPDRRRAAPGGTGDAKTG-GNLNSVLAKQEAAEAGA 147 (256)
T ss_pred EEEEecccccCCCCCCCCCcEEEEEEeeccccccccCCCeEEEEeeeEEeCCCCCCccchhh-CCHHHHHHHHHHHHcCC
Confidence 88776555566653 3567888888887654111235677777654333356678899997 78999999999999999
Q ss_pred ceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcC
Q 016272 260 SDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGT 339 (392)
Q Consensus 260 de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgT 339 (392)
||+|++|. +|+|+|++++|||++++++|+||+++.|+|+||||+.||++|+++|++|+|+.++++||.+|||+|+|||
T Consensus 148 de~llld~--~g~v~E~s~sNlf~~~~~~l~TP~~~~g~L~GitR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfl~ns 225 (256)
T cd00449 148 DEALLLDD--NGYVTEGSASNVFIVKDGELVTPPLDGGILPGITRDSVIELAKELGIKVEERPISLDELYAADEVFLTGT 225 (256)
T ss_pred CEEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCcCcchhHHHHHHHHHHcCCeEEEEecCHHHHhhCCEEEEccc
Confidence 99999997 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHH
Q 016272 340 AVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTL 373 (392)
Q Consensus 340 a~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l 373 (392)
+++|+||.+| +++.+ +++ .||++++|++.|
T Consensus 226 ~~gv~pV~~i--~~~~~--~~~~~~~~~~~l~~~~ 256 (256)
T cd00449 226 AAEVTPVTEI--DGRGI--GDGKPGPVTRKLRELL 256 (256)
T ss_pred cceEEEEEEE--CCeec--CCCCCCHHHHHHHHhC
Confidence 9999999999 56665 444 799999998764
No 26
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate. Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria.
Probab=100.00 E-value=2e-49 Score=378.11 Aligned_cols=247 Identities=31% Similarity=0.451 Sum_probs=210.5
Q ss_pred CccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEE
Q 016272 103 SGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRP 182 (392)
Q Consensus 103 ~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp 182 (392)
|++|+||||+|||||+| +|+ +|++++|++||.+||++|+||.++.+.+.+.+.++++.+.. ...+||+
T Consensus 1 Drg~~~GdgvFEt~~~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~i~~~~~-------~~~~ir~ 68 (249)
T cd01559 1 DRGFAYGDGVFETMRAL---DGR--LFLLDAHLARLERSARRLGIPEPDLPRLRAALESLLAANDI-------DEGRIRL 68 (249)
T ss_pred CCcccccceeEEEEEEE---CCE--EccHHHHHHHHHHHHHhcCcCCCCHHHHHHHHHHHHHhCCC-------CceEEEE
Confidence 68999999999999998 566 77899999999999999999966899999999999998752 3568888
Q ss_pred EEEecCCcccccC--CCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCc
Q 016272 183 LLVGSGPILGLAP--APEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFS 260 (392)
Q Consensus 183 ~~~g~~~~lgv~p--~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~d 260 (392)
++..+....|+.+ ..++.++++..|.++ ....+++++.+.+ +.|..++.++++|+. ||+.+++++++|+++|+|
T Consensus 69 ~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~gv~l~~~~-~~~~~~~~~~~~Kt~-ny~~~~~a~~~a~~~g~d 144 (249)
T cd01559 69 ILSRGPGGRGYAPSVCPGPALYVSVIPLPP--AWRQDGVRLITCP-VRLGEQPLLAGLKHL-NYLENVLAKREARDRGAD 144 (249)
T ss_pred EEecCCCCCCCCCCCCCCCEEEEEeccCCH--HHHhCCcEEEEcc-cccCCCCCCCCcchh-hhHHHHHHHHHHHhcCCC
Confidence 7764433345543 345677888887653 1112467777654 677677789999995 999999999999999999
Q ss_pred eEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCc
Q 016272 261 DVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTA 340 (392)
Q Consensus 261 e~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa 340 (392)
|+||+|+ +|+|+|++++|||++++++|+||+++.++|+||||+.|+++++++|++|+|+.++++||.+|||+|+|||+
T Consensus 145 e~l~l~~--~g~v~E~~~~Nif~~~~~~~~TP~~~~g~L~Gitr~~~l~~~~~~g~~v~e~~i~~~el~~ade~~~~ns~ 222 (249)
T cd01559 145 EALFLDT--DGRVIEGTASNLFFVKDGELVTPSLDRGGLAGITRQRVIELAAAKGYAVDERPLRLEDLLAADEAFLTNSL 222 (249)
T ss_pred EEEEEcC--CCCEEEecceEEEEEECCEEECCCcccCccccHHHHHHHHHHHHcCceEEEEecCHHHHhhCCEEEEecCc
Confidence 9999997 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEeEEEEeCCeEEeeCCCchHHHHHHHHHH
Q 016272 341 VVVAPVGSITYRGKRIEFKTGAQSVSRELYSTL 373 (392)
Q Consensus 341 ~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l 373 (392)
++|+||.+|+ +... .+||++++|++.|
T Consensus 223 ~gi~pV~~id--~~~~----~~~~~~~~l~~~~ 249 (249)
T cd01559 223 LGVAPVTAID--DHDG----PPGPLTRALRELL 249 (249)
T ss_pred cceeEEEEEC--Cccc----CccHHHHHHHHhC
Confidence 9999999993 4211 2689999998764
No 27
>PRK09266 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-48 Score=371.32 Aligned_cols=255 Identities=17% Similarity=0.186 Sum_probs=213.3
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~ 164 (392)
.|.||+++|..++. ++++||||+||||+++ +|+ +|++++|++||.+||++|+++.++.+.+.+.+.++++
T Consensus 5 ~~~nG~~~~~~~a~-----~~~~~GdgvFETir~~---~g~--~~~l~~Hl~RL~~sa~~l~~~~~~~~~l~~~l~~~~~ 74 (266)
T PRK09266 5 IELNGRPATAEDLA-----ALALANYGHFTSMQVR---DGR--VRGLDLHLQRLRRASRELFGAALDDDRVRAQLRAALA 74 (266)
T ss_pred EEECCEECCHHHhh-----hHhhccceEEEEEEEE---CCE--EcCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 79999999998876 4999999999999997 666 6779999999999999997766689999999999984
Q ss_pred HcCCCCCCCCCccEEEEEEEEecCCcccccCC-CCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCC
Q 016272 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA-PEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISN 243 (392)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~-~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~n 243 (392)
.. ....|||+.+.++.+.+|..+. .++.+++++.|..++.. +++++.+.+ +.|. ..++|+. |
T Consensus 75 ~~--------~~~~~ir~~v~r~~g~~~~~~~~~~~~~~i~~~~~~~~~~---~~v~l~~~~-~~r~----~~~~K~~-~ 137 (266)
T PRK09266 75 AG--------PADASVRVTVFAPDFDFRNPLADVAPDVLVATSPPADGPA---GPLRLQSVP-YERE----LPHIKHV-G 137 (266)
T ss_pred cC--------CCcEEEEEEEEecCcccCCCCCCCCceEEEEEecCCcCCC---CCeEEEEEE-eccc----CCCCCCC-C
Confidence 32 1357999887654444565332 35677777777654433 456666553 4554 3479997 7
Q ss_pred hHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEee
Q 016272 244 YAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAI 323 (392)
Q Consensus 244 Y~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i 323 (392)
|..+++++++|+++|+||+|++|. +|+|+|++++|||++++|+|+||+. ++|+||||+.|+++++++|++|+|+.+
T Consensus 138 ~l~~vla~~~a~~~g~de~l~ln~--~g~v~E~~~sNlf~v~~~~l~TP~~--~~L~GItR~~ll~~~~~~g~~v~e~~i 213 (266)
T PRK09266 138 TFGQLHLRRLAQRAGFDDALFVDP--DGRVSEGATWNLGFWDGGAVVWPQA--PALPGVTMALLQRGLERLGIPQRTRPV 213 (266)
T ss_pred cHHHHHHHHHHHHcCCCeEEEEcC--CCcEEEcCceEEEEEECCEEECCCC--CccchHHHHHHHHHHHHcCCeeEEEEC
Confidence 778888999999999999999997 7999999999999999999999994 699999999999999999999999999
Q ss_pred CHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHH
Q 016272 324 PVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVG 375 (392)
Q Consensus 324 ~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~ 375 (392)
+++||.+|||+|+|||+++|+||.+| +++.+ +++ +|++++|++.|.+
T Consensus 214 ~~~eL~~adevfltnSl~gi~pV~~i--~~~~~--~~~-~~~~~~l~~~~~~ 260 (266)
T PRK09266 214 TLADLGRFAGAFACNAWRGQRAVSAI--DDVAL--PDS-HALLELLRRAYEA 260 (266)
T ss_pred CHHHHHHhhHhhhhcCccceEEEEEE--CCEEC--CCC-chHHHHHHHHHHh
Confidence 99999999999999999999999999 56665 443 7999999999854
No 28
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-IV, currently consists of proteins of about 270 to 415 amino-acid residues that share a few regions of sequence similarity. Surprisingly, the best conserved region does not include the lysine residue to which the pyridoxal-phosphate group is known to be attached, in ilvE, but is located some 40 residues at the C terminus side of the pyridoxal-phosphate-lysine. The D-amino acid transferases (D-AAT), which are among the members of this entry, are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity [, ]. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1EKV_A 2HGX_A 1EKP_A 1KTA_B 1KT8_B 2A1H_B 2HDK_A 2HGW_B 1EKF_B 2HG8_A ....
Probab=100.00 E-value=2.8e-39 Score=303.26 Aligned_cols=224 Identities=30% Similarity=0.409 Sum_probs=172.7
Q ss_pred eChHHHHHHHHHHHHHcCCCC-CCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEee
Q 016272 129 FRPDQNAIRLQTGAERMCMPS-PSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASP 207 (392)
Q Consensus 129 Fr~~~H~~RL~~Sa~~l~ip~-~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P 207 (392)
|++++|++||.+||+++ ++. ++.+.+.+.+.++++.+.. .+..|||+++.+++...+..++...........
T Consensus 1 f~l~~Hl~Rl~~S~~~l-~~~~~~~~~l~~~i~~~~~~~~~------~~~~~ir~~v~~g~~~~~~~~~~~~~~~~~~~~ 73 (231)
T PF01063_consen 1 FFLDEHLERLRRSARAL-IGLPFSREELREIIQELLEANPD------QGEGYIRITVTRGGGPLGGSPPENSAPPPFSIA 73 (231)
T ss_dssp ETHHHHHHHHHHHHHHT-TTHSSHHHHHHHHHHHHHHHTTS------SSSEEEEEEEEETSSSSSSSECSEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHH-ccCCcCHHHHHHHHHHHHHHcCC------CCCcEEEEEEEcCCCCcCccCcccccccccccc
Confidence 67999999999999999 443 3789999999999998751 245599998887766666665543332211111
Q ss_pred cCccccCCCccEEEEeeccccccCCC-----CCCCCCccCChHHHHH-HHHHHHhCCCceEEEEeCCCCCeEEeeCceeE
Q 016272 208 VGNYFKEGLAPLNLYVEDEFHRATPG-----GAGGVKAISNYAPVLK-AISRAKNRGFSDVLYLDSVNKKNLEEVSSCNI 281 (392)
Q Consensus 208 ~~~y~~~g~~pv~l~v~~~~~R~~p~-----g~g~~Kt~~nY~~~l~-a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNi 281 (392)
..... +..........++.+. .++++|+. ||....+ +.++|+++|+||+|++|. +|+|+|++++||
T Consensus 74 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Kt~-~~~~~~~~~~~~a~~~g~de~ll~d~--~G~v~E~~~sNi 145 (231)
T PF01063_consen 74 PPRRP-----PPPLVGSVGVRRASPPLPRPNPLPRHKTT-NRLANVLAALRAAREKGADEALLLDE--DGNVTEGSTSNI 145 (231)
T ss_dssp TCHHH-----HEEEEEECSEECETTTSE-TTTSTTS-BS-HHHHHHHHHHHHHHHTTSSEEEEEET--TSBEEEESSSEE
T ss_pred ccccC-----CcceeeeeeEEeccccccccCCCCCeeEC-CcchhhHHHHHHHHhcCcchhheecC--CCCcCCCCCccc
Confidence 11111 1111111122222222 37899997 5555555 777778999999999998 799999999999
Q ss_pred EEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC
Q 016272 282 FILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG 361 (392)
Q Consensus 282 F~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~ 361 (392)
|+++||+|+|||++.|||+||||+.|+++++++|++|+|++++++||.+|||+|+|||+++|+||.+| +++.+ +
T Consensus 146 f~~~~~~~~TP~~~~giL~Gitr~~ll~~~~~~g~~v~e~~i~~~~L~~ade~fl~ns~~gi~pV~~i--~~~~~--~-- 219 (231)
T PF01063_consen 146 FFVKDGTLYTPPLDSGILPGITRQLLLELAKELGIPVEERPITLDDLQQADEVFLTNSLRGIRPVKSI--DGRSF--G-- 219 (231)
T ss_dssp EEEETTEEEEESGSSSSB--HHHHHHHHHHHHTTSEEEEE-BBHHHHHTHSEEEEEETTTEEEEEEEE--TTEES--T--
T ss_pred ccccCCEEEcCChhhhhccHHHHHHHHHHHHhCCCCcEEEEeCHHHhhhhhheEEecchhhEEEEEEE--CCEEC--C--
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 67775 4
Q ss_pred chHHHHHHHHHH
Q 016272 362 AQSVSRELYSTL 373 (392)
Q Consensus 362 ~g~vt~~L~~~l 373 (392)
.||+|++|+++|
T Consensus 220 ~~p~~~~L~~~~ 231 (231)
T PF01063_consen 220 PGPITRRLQEAY 231 (231)
T ss_dssp THHHHHHHHHHH
T ss_pred CCHHHHHHHHhC
Confidence 799999999986
No 29
>PRK07546 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=281.27 Aligned_cols=205 Identities=17% Similarity=0.204 Sum_probs=166.5
Q ss_pred CeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCC
Q 016272 110 QGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGP 189 (392)
Q Consensus 110 ~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~ 189 (392)
.++||||+++ ++|+ ++++++|++||.+||+.|++|.+ .+.+.+.+.++++.+. +..++|..+.. ++
T Consensus 4 ~~lfETi~~~--~~G~--~~~l~~Hl~RL~~sa~~l~~~~~-~~~l~~~l~~~~~~~~--------~~~~vrl~~~~-~g 69 (209)
T PRK07546 4 FELIETLRWE--PGAG--FPRLDRHLARLERSARALGFPCD-PAAVRAKLAEAVAGAQ--------GPLRLRLTLAR-DG 69 (209)
T ss_pred ccEEEEEEEe--CCCC--cccHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHhhccC--------CCeEEEEEEcC-CC
Confidence 4699999985 2566 67789999999999999999975 6788888988887531 35678855432 21
Q ss_pred cccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCC
Q 016272 190 ILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVN 269 (392)
Q Consensus 190 ~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~ 269 (392)
.+.+...|.++.... .+.++.+.+ ..+..+..+..+|+. ||+..++++++|+++|+||+|++|.
T Consensus 70 ----------~~~i~~~p~~~~~~~--~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~v~a~~~a~~~g~de~l~l~~-- 133 (209)
T PRK07546 70 ----------RLTVETAPLPPLPPD--TVWRVAIAR-TRLDSADPLLRYKTT-RRAAYDAARAELPPAEADEVILLNE-- 133 (209)
T ss_pred ----------CEEEEEecCCCCCCC--CcEEEEEcC-cccCCCCcchhcccC-ChHHHHHHHHHHhhCCCCEEEEECC--
Confidence 245666776432221 234454443 344545556789996 9999999999999999999999997
Q ss_pred CCeEEeeCceeEEEEECCEEE-cCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEE
Q 016272 270 KKNLEEVSSCNIFILKGNIIS-TPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGS 348 (392)
Q Consensus 270 ~g~V~E~s~sNiF~v~~~~l~-TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~ 348 (392)
+|+|+|++++||||+++++|+ |||++.|+|+||||+.+++. .+|+|+.++++||.+|||+|+|||++||+||..
T Consensus 134 ~G~v~E~s~~Ni~~~~~~~~~~TP~~~~g~L~Gi~R~~ll~~-----~~v~e~~i~~~~L~~adevfl~NSl~gv~pV~~ 208 (209)
T PRK07546 134 RGEVCEGTITNVFLDRGGGMLTTPPLSCGLLPGVLRAELLDA-----GRAREAVLTVDDLKSARAIWVGNSLRGLIRAEL 208 (209)
T ss_pred CCcEEEcCceeEEEEECCEEEECCCCcCCCCccHHHHHHHhh-----CCeEEEEcCHHHHhhCCEEEEEccceeEEEEEE
Confidence 799999999999999999999 99999999999999999995 589999999999999999999999999999976
Q ss_pred E
Q 016272 349 I 349 (392)
Q Consensus 349 I 349 (392)
|
T Consensus 209 ~ 209 (209)
T PRK07546 209 I 209 (209)
T ss_pred C
Confidence 4
No 30
>PRK07101 hypothetical protein; Provisional
Probab=99.96 E-value=4.1e-28 Score=222.36 Aligned_cols=182 Identities=17% Similarity=0.225 Sum_probs=136.0
Q ss_pred eEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCC-C-CHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecC
Q 016272 111 GLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPS-P-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSG 188 (392)
Q Consensus 111 gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~-~-~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~ 188 (392)
++||||+++ +|+ ++++++|++||.+||+.+++.. + +.+.+.+.+.++ . .+..|+|.+. +.+
T Consensus 4 ~l~ETir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~----~-------~~~~r~rl~~-~~g 66 (187)
T PRK07101 4 PLFETIAIE---DGE--IQNLSYHQQRYERTLAEFYGKEAPFDLAEIIQPPTEL----Q-------EGLVRCRIDY-NAE 66 (187)
T ss_pred cceEEEeee---CCe--eccHHHHHHHHHHHHHHHcccCCcccHHHHhhchhhh----c-------CCCEEEEEEe-cCC
Confidence 699999997 666 7789999999999999998854 3 677777666543 1 2457888644 543
Q ss_pred CcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCC
Q 016272 189 PILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSV 268 (392)
Q Consensus 189 ~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~ 268 (392)
.++ +...|..+.. .+++++...++ ....+|+. |+. .+....|++.|+||+|++|
T Consensus 67 -~~~----------~~~~~~~~~~---~~~~~~~~~~~-------~~~~~Kt~-~r~--~~~~~~a~~~g~de~l~~~-- 120 (187)
T PRK07101 67 -IYQ----------VQYFPYQRRP---IRSFQPVYCDD-------IDYSLKYT-DRS--ALNELFAQKGECDEIIIIK-- 120 (187)
T ss_pred -cEE----------EEEEcCCCCC---cCceEEEecCC-------cccccccC-CHH--HHHHHHHHhCCCCEEEEEc--
Confidence 222 2233332211 12344432222 12378997 432 2344556778999999997
Q ss_pred CCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCce
Q 016272 269 NKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVV 343 (392)
Q Consensus 269 ~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I 343 (392)
+|+|+|++++|||++++++|+||| .++|+||||+.+++. | +|+|+.++++||.+|||+|+|||++|+
T Consensus 121 -~G~v~E~~~sNi~~~~~~~~~TP~--~~~L~Gi~R~~ll~~----~-~v~e~~i~~~~L~~ad~~~~~nsl~G~ 187 (187)
T PRK07101 121 -NGLVTDTSIGNLAFFDGKQWFTPK--KPLLKGTQRARLLDE----G-KIKEKDITVEDLLQYEEIRLINAMNGF 187 (187)
T ss_pred -CCEEEEccceEEEEEECCEEEcCC--CCCccHHHHHHHHcc----C-CEEEEecCHHHHhcCCEEEEEecccCC
Confidence 599999999999999999999999 489999999999984 5 899999999999999999999999874
No 31
>PF15507 DUF4649: Domain of unknown function (DUF4649)
Probab=51.74 E-value=28 Score=27.05 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=36.0
Q ss_pred EEEeeCHHHHhhcce-eeEE-cCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHH
Q 016272 319 EERAIPVDELLEADE-VFCT-GTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYS 371 (392)
Q Consensus 319 ~Er~i~~~eL~~adE-vf~t-gTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~ 371 (392)
.||.++.++..++.- --+| -|...=.||.++.++|+.+.+.+.-|.+-..|.+
T Consensus 11 ~Er~~~fe~~~ef~~s~~~C~vtipD~~~V~svt~~G~~ldy~G~~GdLY~~L~k 65 (72)
T PF15507_consen 11 QERTQTFEDYNEFMRSQSGCIVTIPDYYPVTSVTYNGQDLDYQGTYGDLYFFLMK 65 (72)
T ss_pred eEEEEEeCCHHHHHHHhccCcccCCCceEEEEEEECCEEeccccchhHHHHHHHH
Confidence 467777666655421 2345 6788889999999999998764325666655544
No 32
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=33.17 E-value=1.2e+02 Score=24.11 Aligned_cols=66 Identities=18% Similarity=0.316 Sum_probs=46.0
Q ss_pred HHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC--chHHHHHHHHHH
Q 016272 306 SIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG--AQSVSRELYSTL 373 (392)
Q Consensus 306 ~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~--~g~vt~~L~~~l 373 (392)
.|-+.+++.|++|..-. .-+++..+|.+.++|--..++-+.....+.-.|. ..| +.++++.|.+.|
T Consensus 12 ~v~~~L~~~GyeVv~l~-~~~~~~~~daiVvtG~~~n~mg~~d~~~~~pVIn-A~G~T~eEI~~~v~~rl 79 (80)
T PF03698_consen 12 NVKEALREKGYEVVDLE-NEQDLQNVDAIVVTGQDTNMMGIQDTSTKVPVIN-ASGLTAEEIVQEVEERL 79 (80)
T ss_pred HHHHHHHHCCCEEEecC-CccccCCcCEEEEECCCcccccccccccCceEEe-cCCCCHHHHHHHHHHhh
Confidence 45677888999887543 3345788999999998888887765544443332 234 678888887765
No 33
>PF13051 DUF3912: Protein of unknown function (DUF3912)
Probab=26.18 E-value=61 Score=24.05 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=30.9
Q ss_pred ceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCC
Q 016272 278 SCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCG 315 (392)
Q Consensus 278 ~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G 315 (392)
-++++++.+++.+--.+.+-+|-||--...-++|++.|
T Consensus 31 ~~~f~ivi~~q~i~velkdivlvgvdvgqfh~wceqng 68 (68)
T PF13051_consen 31 ESHFAIVIGEQSIDVELKDIVLVGVDVGQFHEWCEQNG 68 (68)
T ss_pred CCcEEEEECCeEEEEEeeeEEEEEecHHHHHHHHhhCC
Confidence 46788888888888888888899998888888887654
No 34
>PRK03094 hypothetical protein; Provisional
Probab=24.03 E-value=2.4e+02 Score=22.36 Aligned_cols=65 Identities=18% Similarity=0.296 Sum_probs=45.6
Q ss_pred HHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC--chHHHHHHHHHH
Q 016272 307 IIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG--AQSVSRELYSTL 373 (392)
Q Consensus 307 il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~--~g~vt~~L~~~l 373 (392)
|-+.+++.|+.|+.=. +..++...|.+.+||--..++-+....++.-.|. ..| +.++++.|.+.+
T Consensus 13 i~~~L~~~GYeVv~l~-~~~~~~~~Da~VitG~d~n~mgi~d~~t~~pVI~-A~G~TaeEI~~~ve~r~ 79 (80)
T PRK03094 13 VQQALKQKGYEVVQLR-SEQDAQGCDCCVVTGQDSNVMGIADTSTKGSVIT-ASGLTADEICQQVESRL 79 (80)
T ss_pred HHHHHHHCCCEEEecC-cccccCCcCEEEEeCCCcceecccccccCCcEEE-cCCCCHHHHHHHHHHhh
Confidence 5677888999886432 2234677899999999999998887755444342 234 678888887665
No 35
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=23.64 E-value=56 Score=26.52 Aligned_cols=32 Identities=31% Similarity=0.456 Sum_probs=27.7
Q ss_pred cchHHHHHHHHHHHCCCcEEEEeeCHHHHhhc
Q 016272 300 AGITRKSIIEIASDCGFQVEERAIPVDELLEA 331 (392)
Q Consensus 300 ~GITR~~il~la~~~G~~V~Er~i~~~eL~~a 331 (392)
.|=.-+.||+.|++.|++++|.+.-++.|.+.
T Consensus 30 ~G~iAe~II~~Ake~~Vpi~edp~Lv~~L~~l 61 (92)
T COG2257 30 KGEIAEKIIEKAKEHGVPIQEDPLLVELLLKL 61 (92)
T ss_pred chHHHHHHHHHHHHcCCCcccCHHHHHHHHhc
Confidence 46678999999999999999999888887764
No 36
>cd05569 PTS_IIB_fructose PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA and FruB) each containing 3 domains. The FruA protein contains two tandem nonidentical IIB domains and a C-terminal IIC transmembrane domain. Both IIB domains of FruA are included in this alignment. The FruB protein (also referred to as diphosphoryl transfer protein) contains a IIA domain, a domain of unknown function, and an Hpr-like domain called FPr (fructose-inducible HPr). This familiy also includes the IIB domains of several fructose-like PTS permeases including the Frv permease encoded by the frvABXR operon, the Frw permease encoded by the frwACBD operon, the Frx permease encoded by the hrsA gene, and the Fry permease encoded by the fryABC (ypdDGH) operon. FruAB takes up exogenous fructose, releasing the 1-p
Probab=22.38 E-value=1.6e+02 Score=23.77 Aligned_cols=37 Identities=19% Similarity=0.428 Sum_probs=28.6
Q ss_pred HHHHHHHHHCCCcEE---------EEeeCHHHHhhcceeeEEcCcC
Q 016272 305 KSIIEIASDCGFQVE---------ERAIPVDELLEADEVFCTGTAV 341 (392)
Q Consensus 305 ~~il~la~~~G~~V~---------Er~i~~~eL~~adEvf~tgTa~ 341 (392)
+.+-+.+++.|+++. +..++.+++.+||-+++++...
T Consensus 19 ~~L~~aa~~~g~~~~ve~~~~~g~~~~l~~~~i~~Ad~vi~~~~~~ 64 (96)
T cd05569 19 EALEKAAKKLGWEIKVETQGSLGIENELTAEDIAEADAVILAADVP 64 (96)
T ss_pred HHHHHHHHHCCCeEEEEEecCcCccCcCCHHHHhhCCEEEEecCCC
Confidence 444567888999877 4567779999999999988763
No 37
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate.
Probab=21.87 E-value=1e+02 Score=29.00 Aligned_cols=27 Identities=26% Similarity=0.585 Sum_probs=23.4
Q ss_pred HHHHHHHHHHCCCcEEEEeeCHHHHhh
Q 016272 304 RKSIIEIASDCGFQVEERAIPVDELLE 330 (392)
Q Consensus 304 R~~il~la~~~G~~V~Er~i~~~eL~~ 330 (392)
-+.+++.|++.|+.|++|.++++||.+
T Consensus 92 V~~lF~~A~~~gi~V~~rsvs~~ei~~ 118 (212)
T PF09778_consen 92 VNRLFQKAKAAGINVEKRSVSIQEIIE 118 (212)
T ss_pred HHHHHHHHHHcCCceEEeeccHHHHHH
Confidence 356778899999999999999999976
No 38
>TIGR00829 FRU PTS system, fructose-specific, IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Fru family is a large and complex family which includes several sequenced fructose and mannitol-specific permeases as well as several PTS components of unknown specificities. The fructose components of this family phosphorylate fructose on the 1-position. The Fru family PTS systems typically have 3 domains, IIA, IIB and IIC, which may be found as 1 or more proteins. The fructose and mannitol transporters form separate phylogenetic clusters in this family. This family is specific for the IIB domain of the fructose PTS transporters.
Probab=21.53 E-value=1.5e+02 Score=23.55 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=26.1
Q ss_pred HHHHHCCCcEE---------EEeeCHHHHhhcceeeEEcCc
Q 016272 309 EIASDCGFQVE---------ERAIPVDELLEADEVFCTGTA 340 (392)
Q Consensus 309 ~la~~~G~~V~---------Er~i~~~eL~~adEvf~tgTa 340 (392)
+.|++.|+.+. +..++.+++..||-+++.+..
T Consensus 22 ~aA~~~G~~i~VE~qg~~g~~~~lt~~~i~~Ad~viia~d~ 62 (85)
T TIGR00829 22 KAAKKRGWEVKVETQGSVGAQNALTAEDIAAADGVILAADR 62 (85)
T ss_pred HHHHHCCCeEEEEecCCcCccCCCCHHHHHhCCEEEEeccC
Confidence 45777898776 556888999999999998876
Done!