Query 016272
Match_columns 392
No_of_seqs 275 out of 1899
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 10:48:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dth_A Branched-chain amino ac 100.0 5.9E-89 2E-93 682.0 35.6 344 49-392 16-372 (372)
2 3dtg_A Branched-chain amino ac 100.0 1.8E-88 6.1E-93 680.2 35.9 351 42-392 9-372 (372)
3 3uzo_A Branched-chain-amino-ac 100.0 4.5E-85 1.6E-89 651.8 34.2 337 53-391 16-358 (358)
4 4dqn_A Putative branched-chain 100.0 8.7E-83 3E-87 633.0 39.4 333 59-392 7-344 (345)
5 2coi_A Branched chain aminotra 100.0 1.4E-81 4.7E-86 632.7 39.8 334 56-392 37-386 (386)
6 2a1h_A Branched chain aminotra 100.0 9.1E-79 3.1E-83 608.8 40.8 331 57-391 18-365 (365)
7 3u0g_A Putative branched-chain 100.0 4.8E-67 1.7E-71 516.8 33.1 298 79-391 24-328 (328)
8 1iye_A Branched-chain amino ac 100.0 3E-63 1E-67 485.9 34.8 292 85-391 9-307 (309)
9 2eiy_A ILVE, branched-chain am 100.0 5.6E-63 1.9E-67 483.8 34.8 292 85-392 8-306 (308)
10 3daa_A D-amino acid aminotrans 100.0 2.2E-57 7.4E-62 438.4 32.2 268 85-376 3-275 (277)
11 1i2k_A 4-amino-4-deoxychorisma 100.0 3.9E-55 1.3E-59 420.4 31.4 262 85-374 2-266 (269)
12 3lul_A 4-amino-4-deoxychorisma 100.0 4.5E-54 1.5E-58 414.2 32.0 259 85-377 6-267 (272)
13 2xpf_A 4-amino-4-deoxychorisma 100.0 2.7E-54 9.1E-59 419.7 30.0 262 85-375 24-288 (292)
14 3sno_A Hypothetical aminotrans 100.0 1.7E-53 5.7E-58 418.1 26.4 268 85-375 17-312 (315)
15 3csw_A BCAT, putative branched 100.0 1.1E-53 3.6E-58 414.2 24.3 274 72-388 7-283 (285)
16 2zgi_A Putative 4-amino-4-deox 100.0 3.5E-47 1.2E-51 360.9 20.7 226 85-349 2-228 (246)
17 3qqm_A MLR3007 protein; struct 100.0 2.7E-42 9.4E-47 322.5 22.8 207 107-348 13-220 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 7.3E-39 2.5E-43 293.2 19.0 189 107-343 2-194 (194)
No 1
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=5.9e-89 Score=681.97 Aligned_cols=344 Identities=39% Similarity=0.733 Sum_probs=325.1
Q ss_pred CCCCCCCCccCCCCCCCCCccccccCceeEEEeccc-eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEE
Q 016272 49 PSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127 (392)
Q Consensus 49 ~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~ 127 (392)
+.+.+..+...++||++|+||++|||||++++|+++ +|.||+|+|++++.|+|.|++||||||||||||+|+++||+++
T Consensus 16 ~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~ 95 (372)
T 3dth_A 16 ANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIV 95 (372)
T ss_dssp CCSSCCCHHHHHHHHHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEE
T ss_pred ecCCCCCchhcccchhccCCCCccCCceEEEEEcCCCeEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEe
Confidence 333444445556899999999999999999999995 8999999999999999999999999999999999999999999
Q ss_pred eeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCC-CCccEEEEEEEEecCCcccccCCCCeEEEEEEe
Q 016272 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP-GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFAS 206 (392)
Q Consensus 128 lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~-~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~ 206 (392)
+|||++|++||++||++|+||.++.++|.++|+++++.|..|||+. .++++||||+++++++.+|+.|+.++.++|+++
T Consensus 96 lFrl~~H~~RL~~Sa~~L~mp~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~~~~~~i~~~ 175 (372)
T 3dth_A 96 SFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIAS 175 (372)
T ss_dssp EESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCSEEEEEEEEE
T ss_pred ecCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCCCeEEEEEEe
Confidence 9999999999999999999997899999999999999999999986 457999999999998889999988999999999
Q ss_pred ecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEEC
Q 016272 207 PVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKG 286 (392)
Q Consensus 207 P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~ 286 (392)
|+++||+.|.+|+++.++++|.|++|++++++|+++||+++++++++|+++||||+||||..++|+|+|++++|||++++
T Consensus 176 p~~~y~~~g~~~v~l~v~~~~~R~~p~g~~~~K~~gNY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~ 255 (372)
T 3dth_A 176 PAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFG 255 (372)
T ss_dssp EESCSSSCSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEES
T ss_pred eCchhhccCCccEEEEEccceeccCCCcccchhhHhhhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEEEC
Confidence 99999998899999999888999999999999998899999999999999999999999986689999999999999999
Q ss_pred C----EEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhc------ceeeEEcCcCceEEeEEEEeCCeEE
Q 016272 287 N----IISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRI 356 (392)
Q Consensus 287 ~----~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I~~~~~~~ 356 (392)
+ +|+|||++++||+||||++||++|+++|++|+||+|+++||.+| +|+|+|||+++|+||.+|+++++.+
T Consensus 256 ~~~g~~l~TP~l~~~iL~GITR~~vl~la~~~G~~v~Er~i~~~eL~~a~~~g~~dEvf~tgTa~~i~PV~~Id~~~~~~ 335 (372)
T 3dth_A 256 SGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEF 335 (372)
T ss_dssp CGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEE
T ss_pred CCCceEEEECCCCCCcCHHHHHHHHHHHHHHCCCeEEEEECCHHHHHhhhhcCCccEEEEecccceEEEEEEEccCCceE
Confidence 8 99999999999999999999999999999999999999999998 9999999999999999999888888
Q ss_pred eeCCC-chHHHHHHHHHHHHhhccCCCCCCCCeEECC
Q 016272 357 EFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 357 ~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 392 (392)
.++++ +||+|++|+++|.+||+|++||++||+++||
T Consensus 336 ~i~~g~~Gpvt~~L~~~l~~iq~g~~~d~~~W~~~v~ 372 (372)
T 3dth_A 336 TIADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN 372 (372)
T ss_dssp ECTTSSCCHHHHHHHHHHHHHHHTSSCCTTCCEEECC
T ss_pred ECCCCCcCHHHHHHHHHHHHHHcCCCCCCCCCeEECC
Confidence 78877 8999999999999999999999999999997
No 2
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=1.8e-88 Score=680.22 Aligned_cols=351 Identities=38% Similarity=0.715 Sum_probs=324.4
Q ss_pred cccccCCCCCCCCCCccCCCCCCCCCccccccCceeEEEeccc-eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEE
Q 016272 42 SLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120 (392)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~ 120 (392)
++++.+.+++...+....+--++|+|||++|||||++++|+.+ +|.||+|+|+++++|||.+++||||||||||||+|+
T Consensus 9 ~~~~~~~~~~~p~~~~~~~~~~~~~~fg~~~tdhm~~~~~~~~~gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~ 88 (372)
T 3dtg_A 9 PLEFTVSANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYR 88 (372)
T ss_dssp -CCCEECCCSSCCCHHHHHHHHHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEE
T ss_pred ceEEEEeCCCCCCCcchhhhHhhccCCCCCccceeEEEEECCCCcEeCCEEEEchhceeCcchhhhhccceeeeeEEEEE
Confidence 3355555544333222221226899999999999999999855 899999999999999999999999999999999999
Q ss_pred ecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCC-ccEEEEEEEEecCCcccccCCCCe
Q 016272 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEY 199 (392)
Q Consensus 121 ~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~-~~lyIRp~~~g~~~~lgv~p~~~~ 199 (392)
++||++++|||++|++||.+||++|+||.++.+.+.++++++++.+.+|||+..+ .++||||+++++++.+|+.|+.++
T Consensus 89 ~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP~~~~e~~~~~~~~l~~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~~~ 168 (372)
T 3dtg_A 89 WADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEY 168 (372)
T ss_dssp CTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCSEE
T ss_pred CCCCeEEeeCchHHHHHHhhcccccCCCCCCHHHHHHHHHHHHHHhhhhccccCCCCceEEEEEEEeecCccCcCCCCCc
Confidence 9999999999999999999999999999999999999999999999999998654 589999999999999999999999
Q ss_pred EEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCce
Q 016272 200 TFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSC 279 (392)
Q Consensus 200 ~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~s 279 (392)
.++++++|+++|+..|.+++.+.+..++.|++|++++.+|.++||+++++++.+|+++||||+||||..++|+|+|++++
T Consensus 169 ~~~ii~~p~~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~G~deal~Ld~~~~g~V~E~~~s 248 (372)
T 3dtg_A 169 RYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGM 248 (372)
T ss_dssp EEEEEEEEESCSSTTSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSEEEEECTTTSCBEEEETTE
T ss_pred eeeeEecccccccccCcccceeecccceeecCcCCcchHHhcCCcchhhhHHHHHHhcCcchhhhhccccccceeecCce
Confidence 99999999999999898999888888899999999999999999999999999999999999999998778999999999
Q ss_pred eEEEE----ECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhc------ceeeEEcCcCceEEeEEE
Q 016272 280 NIFIL----KGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSI 349 (392)
Q Consensus 280 NiF~v----~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I 349 (392)
|||+| +||+|+|||++++||+||||++||++|+++|++|+||+|+++||.+| ||||+|||+++|+||.+|
T Consensus 249 NiF~V~~~~kdg~liTPpl~~~iL~GITR~sVi~LA~~~Gi~V~Er~it~~El~~A~~~~~~dEvF~tGTaa~I~PV~~I 328 (372)
T 3dtg_A 249 NLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHV 328 (372)
T ss_dssp EEEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEE
T ss_pred EEEEEEecCCCceEEeCCccccccccHHHHHHHHHHHHCCceEEEEeCCHHHHHHHhhcCCCcEEEECCCcceEEEEEEE
Confidence 99999 67799999999999999999999999999999999999999999998 999999999999999999
Q ss_pred EeCCeEEeeCCC-chHHHHHHHHHHHHhhccCCCCCCCCeEECC
Q 016272 350 TYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 350 ~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 392 (392)
++++..+.+++| +||+|++|+++|.+||+|++||++||+++||
T Consensus 329 d~~~~~~~ig~G~~Gpvt~~L~~~~~~iq~G~~~d~~~W~~~v~ 372 (372)
T 3dtg_A 329 KHHDGEFTIADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN 372 (372)
T ss_dssp EETTEEEECTTSSCCHHHHHHHHHHHHHHTTSSCCTTCCEEECC
T ss_pred ecCCceEEcCCCCcCHHHHHHHHHHHHHHCCCCCCCCCCcEeCC
Confidence 998888888888 8999999999999999999999999999997
No 3
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=4.5e-85 Score=651.85 Aligned_cols=337 Identities=41% Similarity=0.697 Sum_probs=312.0
Q ss_pred CCCCccCCCCCCCCCccccccCceeEEEeccceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChH
Q 016272 53 SDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPD 132 (392)
Q Consensus 53 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~ 132 (392)
...++.+++||++|+||++|||||++++|++|.|.||+|+|++++.|+|.|++||||||||||||+|+++||++++|||+
T Consensus 16 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~ 95 (358)
T 3uzo_A 16 EQAKKLADIDWSTLGFSYIRTDLRYLAHWKDGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPD 95 (358)
T ss_dssp --------CCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHH
T ss_pred cccccccCCCcccCCCCCcccCeeEEEEEeCCcEECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHH
Confidence 45556778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCC-ccEEEEEEEEecCCcccccCCCCeEEEEEEeecCcc
Q 016272 133 QNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNY 211 (392)
Q Consensus 133 ~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~-~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y 211 (392)
+|++||++||++|+||.++.++|.++|+++++.|..|||+.+. +++||||+++++++.+|+.|+.++.++|+++|+++|
T Consensus 96 ~Hl~RL~~Sa~~L~ip~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~ 175 (358)
T 3uzo_A 96 QNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPY 175 (358)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCCceEEEEEEEEecCCccccCCCCCeEEEEEEecChhh
Confidence 9999999999999999779999999999999999999998644 589999999999888999998889999999999999
Q ss_pred ccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEE-CCE-E
Q 016272 212 FKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK-GNI-I 289 (392)
Q Consensus 212 ~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~-~~~-l 289 (392)
++.|.+|+++.+++ +.|++|++++++|+++||+++++++++|+++||||+||||.+++|+|+|++++|||+++ ||+ |
T Consensus 176 ~~~g~~~v~l~~~~-~~R~~p~~~~~~K~~~NYl~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l 254 (358)
T 3uzo_A 176 FKGGLTPTNFITSD-YDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKF 254 (358)
T ss_dssp SCSSSCCEEEECCS-CCSSCTTSSTTSCBHHHHHHHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEE
T ss_pred hhcCCccEEEEEEe-eeccCCCccccccchhhhHHHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEE
Confidence 99889999998875 89999999999998779999999999999999999999998546999999999999995 788 9
Q ss_pred EcCCCCCCcccchHHHHHHHHHHH-CCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCC-C-chHHH
Q 016272 290 STPATSGTILAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKT-G-AQSVS 366 (392)
Q Consensus 290 ~TPpl~~~IL~GITR~~il~la~~-~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~-~-~g~vt 366 (392)
+||| +++||+||||++||++|++ +|++|+||+++++||.+|||+|+|||+++|+||.+|++.++.+.+++ + +||+|
T Consensus 255 ~TP~-~~~iL~GItR~~vl~la~~~~g~~v~e~~i~~~eL~~adEvf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt 333 (358)
T 3uzo_A 255 VTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVT 333 (358)
T ss_dssp EEEC-CTTSCCCHHHHHHHHHHHHTTCCEEEEECCBTTCGGGEEEEEEECTTTSSEEEEEEEETTEEEESSCSSSCCHHH
T ss_pred EECC-cCCcccCHHHHHHHHHHHhhcCCeEEEEECCHHHHHhhcceeEEcCcceEEEEEEECcccceeEeCCCCCcCHHH
Confidence 9999 8899999999999999999 99999999999999999999999999999999999998887776754 3 89999
Q ss_pred HHHHHHHHHhhccCCCCCCCCeEEC
Q 016272 367 RELYSTLVGIQTGLIKDNKGWTVEI 391 (392)
Q Consensus 367 ~~L~~~l~~iq~g~~~d~~~W~~~v 391 (392)
++|++.|.+||+|+.||++||+++|
T Consensus 334 ~~L~~~~~~iq~g~~~~~~~W~~~v 358 (358)
T 3uzo_A 334 RRLYDELVGIQYGDKEAPEGWIVKV 358 (358)
T ss_dssp HHHHHHHHHHHTTSSCCCTTCCEEC
T ss_pred HHHHHHHHHHHcCCCCCCCCCceEC
Confidence 9999999999999999999999986
No 4
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=8.7e-83 Score=633.00 Aligned_cols=333 Identities=42% Similarity=0.721 Sum_probs=315.0
Q ss_pred CCCCCCCCCccccccCceeEEEeccceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHH
Q 016272 59 DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRL 138 (392)
Q Consensus 59 ~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL 138 (392)
+++||++|+||++|||||++++|++|.|.||+|+|.+++.|++.|++||||||||||||+|+++||++++|+|++|++||
T Consensus 7 ~~~~~~~l~fg~~~td~m~~~~~~~~~w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL 86 (345)
T 4dqn_A 7 VDLDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERL 86 (345)
T ss_dssp CCCCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHH
T ss_pred CCCCchhcCCCCcccCceEEEEecCCcEECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCC-ccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCCc
Q 016272 139 QTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLA 217 (392)
Q Consensus 139 ~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~-~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~ 217 (392)
.+||++|+||.++.++|.++|+++++.|..|||+.+. +++||||+++++++.+|+.|+.+++++|++.|+++|++.+.+
T Consensus 87 ~~Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~~~ 166 (345)
T 4dqn_A 87 QRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLA 166 (345)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTSCC
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccCCC
Confidence 9999999999779999999999999999999998643 589999999988888999988889999999999999887788
Q ss_pred cEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEE-ECCEEEcCCCCC
Q 016272 218 PLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFIL-KGNIISTPATSG 296 (392)
Q Consensus 218 pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v-~~~~l~TPpl~~ 296 (392)
++++.+++++.|++|++++++|+++||+++++++++|+++||||+||+|.+++|+|+|++++|||++ +||+|+||| +.
T Consensus 167 gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~-~~ 245 (345)
T 4dqn_A 167 PTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPL-SP 245 (345)
T ss_dssp CEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECC-CT
T ss_pred CEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCC-CC
Confidence 9999998778999999999999967999999999999999999999999754699999999999998 899999999 89
Q ss_pred CcccchHHHHHHHHHHH-CCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC--chHHHHHHHHHH
Q 016272 297 TILAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG--AQSVSRELYSTL 373 (392)
Q Consensus 297 ~IL~GITR~~il~la~~-~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~--~g~vt~~L~~~l 373 (392)
+||+||||++||++|++ +|++|+|++++++||.+|||+|+|||+++|+||.+|+..++.+.++++ +||+|++|++.|
T Consensus 246 ~iL~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~ 325 (345)
T 4dqn_A 246 SILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHKLYDEL 325 (345)
T ss_dssp TSCCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHhhhcchhHEEEEEEECcccceeeeCCCCCcCHHHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999999888887777653 799999999999
Q ss_pred HHhhccCCCCCCCCeEECC
Q 016272 374 VGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 374 ~~iq~g~~~d~~~W~~~v~ 392 (392)
.+||+|+.+|++||+++|+
T Consensus 326 ~~i~~g~~~~~~~W~~~v~ 344 (345)
T 4dqn_A 326 TGIQFGDVKAPEGWIYKVD 344 (345)
T ss_dssp HHHHTTSSCCCTTCEEETT
T ss_pred HHHHcCCCCCCCCCceECC
Confidence 9999999999999999986
No 5
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=1.4e-81 Score=632.70 Aligned_cols=334 Identities=34% Similarity=0.599 Sum_probs=308.6
Q ss_pred CccCCCCCCCCCccccccCceeEEEeccc-eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHH
Q 016272 56 ESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQN 134 (392)
Q Consensus 56 ~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H 134 (392)
.++.++||++|+||++|||||+.++|+++ +|.||+|+|++++.|+|.|++||||||||||||+|+++||++++|||++|
T Consensus 37 ~~~~~~~~~~~~fg~~~td~m~~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H 116 (386)
T 2coi_A 37 ILKEKPDPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLN 116 (386)
T ss_dssp SCCCCCCCC-CCTTCCCCSEEEEEEEETTTEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHH
T ss_pred CcccCCCccccCCccccccceEEEEeCCCcEEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHH
Confidence 34567899999999999999999999988 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccC
Q 016272 135 AIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKE 214 (392)
Q Consensus 135 ~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~ 214 (392)
++||++||++|+||.++.++|.++|+++++.|..|+|+..++++||||+++|+++.+|+.|+.+++++|+++|+++|+..
T Consensus 117 ~~RL~~Sa~~l~~p~~~~e~~~~~i~~lv~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~y~~~ 196 (386)
T 2coi_A 117 MDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSS 196 (386)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCSEEEEEEEEEEECCCC--
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEEECcccccc
Confidence 99999999999999779999999999999999999997555689999999998888999998899999999999999987
Q ss_pred C-CccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEE---CC--E
Q 016272 215 G-LAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK---GN--I 288 (392)
Q Consensus 215 g-~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~---~~--~ 288 (392)
| .+++++.+++.+.|++|++++.+|+++||+++++++++|+++||||+||||.. +|+|+|++++|||+++ || +
T Consensus 197 ~~~~~v~l~~~~~~~r~~p~~~g~~K~~~Ny~~~~la~~eA~~~G~de~L~ld~~-~g~V~E~~~sNiF~v~~~~~g~~~ 275 (386)
T 2coi_A 197 GTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGE-DHQITEVGTMNLFLYWINEDGEEE 275 (386)
T ss_dssp ---CCEEEEECTTCCSCCTTSSTTSCCTHHHHTTHHHHHHHHTTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEE
T ss_pred cccccEEEEEcccccccCCCcccccccccChHHHHHHHHHHHHcCCCEEEEEECC-CCEEEEeCCceEEEEEEcCCCCEE
Confidence 7 78999999887889999999999997799999999999999999999999942 7999999999999996 88 9
Q ss_pred EEcCCCCCCcccchHHHHHHHHHHH-CCCcEEEEeeCHHHHhhc------ceeeEEcCcCceEEeEEEEeCCeEEeeC-C
Q 016272 289 ISTPATSGTILAGITRKSIIEIASD-CGFQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRIEFK-T 360 (392)
Q Consensus 289 l~TPpl~~~IL~GITR~~il~la~~-~G~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I~~~~~~~~~~-~ 360 (392)
|+|||++++||+||||++||++|++ .|++|+||+|+++||.+| +|+|+|||+++|+||.+|+|+|+.+.++ +
T Consensus 276 l~TP~l~~~iL~GITR~~vl~la~~~~G~~V~Er~i~~~eL~~A~~~g~~dEvF~tgTa~~i~PV~~I~~~~~~~~~~~~ 355 (386)
T 2coi_A 276 LATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTM 355 (386)
T ss_dssp EEECCCSSSSCCCHHHHHHHHHHHHHCSSEEEECCCBHHHHHHHHTTTCEEEEEEEETTTEEEEEEEEEESSSEEECGGG
T ss_pred EEECCCCCCccHHHHHHHHHHHHHhccCCcEEEEECCHHHHHHHHhcCCccEEEEecceeEEEEEEEEeeCCeEEecCCC
Confidence 9999999999999999999999999 799999999999999999 9999999999999999998889888664 3
Q ss_pred C-chHHHHHHHHHHHHhhccCCCCCCCCeEECC
Q 016272 361 G-AQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 361 ~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 392 (392)
+ +||+|++|+++|.+||+|++| +||+++|+
T Consensus 356 g~~g~vt~~L~~~l~~iq~g~~~--~~W~~~v~ 386 (386)
T 2coi_A 356 ENGPKLASRILSKLTDIQYGREE--RDWTIVLS 386 (386)
T ss_dssp GGTTHHHHHHHHHHHHHHTTSSC--CTTEEEC-
T ss_pred CCcCHHHHHHHHHHHHHhCCCCC--CCCeEeCC
Confidence 4 699999999999999999998 59999985
No 6
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=9.1e-79 Score=608.76 Aligned_cols=331 Identities=33% Similarity=0.594 Sum_probs=308.8
Q ss_pred ccCCCCC-CCCCccccccCceeEEEeccceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHH
Q 016272 57 SADHMDW-DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNA 135 (392)
Q Consensus 57 ~~~~~~~-~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~ 135 (392)
++.+++| ++|+||++|||||+.++|++.+|.||+|+|++++.|+|.|++||||||||||||+|+++||++++|||++|+
T Consensus 18 ~~~~~~~~~~l~fg~~~~d~m~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl 97 (365)
T 2a1h_A 18 PHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNM 97 (365)
T ss_dssp CCCCCCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHH
T ss_pred ccCCCccccccCcCCccccceeeeecccCeEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHH
Confidence 3446778 999999999999999999887799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCC
Q 016272 136 IRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG 215 (392)
Q Consensus 136 ~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g 215 (392)
+||++||++|+||.++.++|.++|.++++.|..|+|...+.++||||+++++++.+|+.|+.+++++|+++|+++|+..|
T Consensus 98 ~RL~~Sa~~l~~~~~~~~~l~~~i~~lv~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~g 177 (365)
T 2a1h_A 98 DRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGG 177 (365)
T ss_dssp HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCCCCcEEEEEEEECccccccc
Confidence 99999999999997799999999999999999999875445899999999888889999888899999999999999878
Q ss_pred -CccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEE-eCCCCCeEEeeCceeEEEEE---CCE--
Q 016272 216 -LAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYL-DSVNKKNLEEVSSCNIFILK---GNI-- 288 (392)
Q Consensus 216 -~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~l-d~~~~g~V~E~s~sNiF~v~---~~~-- 288 (392)
.+++++.+++.+.|++|++++++|+++||+++++++++|+++||||+||| |. +|+|+|++++|||+++ ||+
T Consensus 178 ~~~~v~l~~~~~~~R~~~~~~~~~Kt~~ny~~~~la~~eA~~~G~de~L~l~d~--~G~V~E~~~sNif~v~~~~dg~~~ 255 (365)
T 2a1h_A 178 SVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP--DHQLTEVGTMNIFVYWTHEDGVLE 255 (365)
T ss_dssp SCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT--TTEEEEETTEEEEEEEECTTSCEE
T ss_pred cccceEEEEccccccCCCCccchhchhhccHHHHHHHHHHHHcCCCeEEEEECC--CCeEEEcCceEEEEEEecCCCcEE
Confidence 78999999887889999999999997799999999999999999999999 54 7999999999999996 676
Q ss_pred EEcCCCCCCcccchHHHHHHHHHHHC-CCcEEEEeeCHHHHhhc------ceeeEEcCcCceEEeEEEEeCCeEEeeC-C
Q 016272 289 ISTPATSGTILAGITRKSIIEIASDC-GFQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRIEFK-T 360 (392)
Q Consensus 289 l~TPpl~~~IL~GITR~~il~la~~~-G~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I~~~~~~~~~~-~ 360 (392)
|+|||++++||+||||++||++|+++ |++|+||.++++||.+| ||+|+|||+++|+||.+|+++|+.+.++ +
T Consensus 256 l~TP~l~~~iL~GITR~~vl~la~~~~G~~v~Er~i~~~eL~~A~~~g~~dEvf~tnt~~~i~PV~~i~~~~~~~~~~~~ 335 (365)
T 2a1h_A 256 LVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTM 335 (365)
T ss_dssp EEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTG
T ss_pred EEeCCCCCCccccHHHHHHHHHHHhcCCCceEEEeCCHHHHHHHHhcCCccEEEEcCCeeEEEEEEEEEeCCeEEeeCCC
Confidence 99999999999999999999999995 99999999999999999 9999999999999999998889888765 4
Q ss_pred C-chHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 016272 361 G-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 391 (392)
Q Consensus 361 ~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 391 (392)
+ +||+|++|++.|.+||+|++| +||+++|
T Consensus 336 g~~g~vt~~L~~~~~~~~~g~~~--~~W~~~v 365 (365)
T 2a1h_A 336 ENGPELILRFQKELKEIQYGIRA--HEWMFPV 365 (365)
T ss_dssp GGTTHHHHHHHHHHHHHHTTSSC--CTTEEEC
T ss_pred CCcCHHHHHHHHHHHHHHcCCCC--CCCeeeC
Confidence 4 799999999999999999998 8999986
No 7
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=4.8e-67 Score=516.84 Aligned_cols=298 Identities=28% Similarity=0.451 Sum_probs=268.0
Q ss_pred EEeccc-eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHH
Q 016272 79 MKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFI 156 (392)
Q Consensus 79 ~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~ 156 (392)
++++++ .|.||+++|.+++.+++.|++||||||||||||+|++.||++++|++++|++||.+||++|+||.| +.++|.
T Consensus 24 ~~~~~~~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~ 103 (328)
T 3u0g_A 24 MADRDGKIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLE 103 (328)
T ss_dssp TTSCCSEEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHH
T ss_pred eccCCCEEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
Confidence 334556 799999999999999999999999999999999999888977799999999999999999999976 999999
Q ss_pred HHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCC-CeEEEEEEeecCccccCC--CccEEEEeeccccccCCC
Q 016272 157 DAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYFKEG--LAPLNLYVEDEFHRATPG 233 (392)
Q Consensus 157 ~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~-~~~~~v~~~P~~~y~~~g--~~pv~l~v~~~~~R~~p~ 233 (392)
++++++++.|.. .++||||+++++.+.+|+.|+. .+.++|++.|.++|+..+ .+++++.++ ++.|..|+
T Consensus 104 ~~i~~lv~~n~~-------~~~~iR~~vtrg~~~~g~~p~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~-~~~R~~~~ 175 (328)
T 3u0g_A 104 AAQRDVVRENKL-------ESCYLRPIIWIGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTS-SFTRHHVN 175 (328)
T ss_dssp HHHHHHHHHTTC-------SSEEEEEEEEECSSCCSTTCCCCCEEEEEEEEECC----HHHHHHCEEEEEC-SSCCCCTT
T ss_pred HHHHHHHHhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEEEcCCCCChhhhcCCEEEEEe-eeeecCCC
Confidence 999999999862 5789999987666668887754 578889999998876432 257888876 47899888
Q ss_pred C-CCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHH
Q 016272 234 G-AGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIAS 312 (392)
Q Consensus 234 g-~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~ 312 (392)
+ ++++|+++||+++++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++. ||+||||++||++|+
T Consensus 176 ~~~~~~K~t~nyl~~vla~~eA~~~G~~e~l~ld~--~g~v~E~~~sNif~v~~g~l~TP~~~~-iL~GitR~~vl~~a~ 252 (328)
T 3u0g_A 176 VSMVRAKASGWYVNSILANQEATADGYDEALLLDV--DGYVSEGSGENFFLVNRGKLYTPDLAS-CLDGITRDTVITLAK 252 (328)
T ss_dssp TSCTTSCBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEECCSSS-SCCCHHHHHHHHHHH
T ss_pred CcccchhhhhhhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceeEEEEECCEEEeCCccc-cchHHHHHHHHHHHH
Confidence 7 799996679999999999999999999999997 799999999999999999999999987 999999999999999
Q ss_pred HCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 016272 313 DCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 391 (392)
Q Consensus 313 ~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 391 (392)
++|++|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+|++|++.|.++|+|+.+|++||+++|
T Consensus 253 ~~g~~v~e~~i~~~eL~~adevf~tns~~~v~PV~~I--d~~~~--~~g~~g~vt~~L~~~~~~~~~g~~~~~~~W~~~v 328 (328)
T 3u0g_A 253 EAGIEVIEKRITRDEVYTADEAFFTGTAAEVTPIREL--DNRTI--GGGARGPITEKLQSAFFDVVNGKSAKHADWLTKI 328 (328)
T ss_dssp HTTCCEEECCCCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHHHHHHHHHHHHTTCCSTTGGGEEEC
T ss_pred HcCCeEEEEeCCHHHHhhCCEEEEEcchhhEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceeC
Confidence 9999999999999999999999999999999999999 67765 776 899999999999999999999999999987
No 8
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=3e-63 Score=485.86 Aligned_cols=292 Identities=30% Similarity=0.525 Sum_probs=265.6
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|.+++.+++.|++||||||||||||+|++.||+ ++|++++|++||.+||++|+||.+ +.+++.+++.+++
T Consensus 9 ~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~ 87 (309)
T 1iye_A 9 IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVI 87 (309)
T ss_dssp EEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHH
T ss_pred EEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999877883 389999999999999999999965 9999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCccccCC--CccEEEEeeccccccCCCC-CCCC
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKEG--LAPLNLYVEDEFHRATPGG-AGGV 238 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y~~~g--~~pv~l~v~~~~~R~~p~g-~g~~ 238 (392)
+.+. .+.+|||+++.+++..+|+.|+ .++.++|.+.|.++|+..+ .+++++.+++ +.|..|++ ++.+
T Consensus 88 ~~~~-------~~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~ 159 (309)
T 1iye_A 88 RKNN-------LTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSS-WNRAAPNTIPTAA 159 (309)
T ss_dssp HHTT-------CSSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEECS-SCCCCTTTSCTTS
T ss_pred HhcC-------CCCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEee-eeccCCCCCCccc
Confidence 9875 2578999988876667888765 3688899999998877544 2578888764 78888876 4899
Q ss_pred CccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcE
Q 016272 239 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 318 (392)
Q Consensus 239 Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V 318 (392)
|+++||+++++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++.+||+||||++||++|+++|++|
T Consensus 160 K~~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v 237 (309)
T 1iye_A 160 KAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEV 237 (309)
T ss_dssp CBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCE
T ss_pred cchhhhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHcCCeE
Confidence 98779999999999999999999999997 7999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 016272 319 EERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 391 (392)
Q Consensus 319 ~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 391 (392)
+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.++|+|+.+|+++|++.|
T Consensus 238 ~E~~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~~g~~g~~~~~l~~~~~~~~~g~~~~~~~w~~~v 307 (309)
T 1iye_A 238 REQVLSRESLYLADEVFMSGTAAEITPVRSV--DGIQV--GEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQV 307 (309)
T ss_dssp EECCCBTTHHHHCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHHHHHHHHHGGGTTSSCCCSCCEEEC
T ss_pred EEEeCCHHHHhhCcEEEEccCCCEEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHcCCCCccCCCCeEC
Confidence 9999999999999999999999999999999 67765 666 799999999999999999999999999987
No 9
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=5.6e-63 Score=483.84 Aligned_cols=292 Identities=31% Similarity=0.424 Sum_probs=261.2
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+++|.+++.+++.|++||||||||||||+|++.||. ++|++++|++||.+||++|+||.+ +.+++.+++.+++
T Consensus 8 ~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~ 86 (308)
T 2eiy_A 8 IWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEVV 86 (308)
T ss_dssp EEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSC-EEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred EEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcc-cccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999888887 799999999999999999999965 8999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCccccCC--CccEEEEeeccccccCCCC-CCCC
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKEG--LAPLNLYVEDEFHRATPGG-AGGV 238 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y~~~g--~~pv~l~v~~~~~R~~p~g-~g~~ 238 (392)
+.+.. +.+|||+++.+++..+|+.|. .++.++|++.|+++|+..+ .+++++.+++ +.|..|++ ++++
T Consensus 87 ~~~~~-------~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~ 158 (308)
T 2eiy_A 87 RRNGY-------RSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSS-WARFPANVMPGKA 158 (308)
T ss_dssp HHTTC-------SSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECS-SCBCCTTTSCTTS
T ss_pred HhCCC-------CcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEec-ceecCCCCcCcce
Confidence 98752 468999998876667787765 5788999999998876543 3578887765 67888865 4899
Q ss_pred CccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcE
Q 016272 239 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 318 (392)
Q Consensus 239 Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V 318 (392)
|+.+||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++. ||+||||++||++|+++|++|
T Consensus 159 Kt~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~~~~-iL~GitR~~ll~~a~~~g~~v 235 (308)
T 2eiy_A 159 KVGGNYVNSALAKMEAVAAGADEALLLDE--EGYVAEGSGENLFFVRDGVIYALEHSV-NLEGITRDSVIRIAKDLGYEV 235 (308)
T ss_dssp CBGGGHHHHHHHHHHHHHTTCSEEEEEBT--TSSEEEESSCEEEEEETTEEEEECCTT-SCCCHHHHHHHHHHHHTTCCE
T ss_pred ehhhhHHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCceEEEEEECCEEEeCCcCC-CCchHHHHHHHHHHHHCCCeE
Confidence 99977999999999999999999999997 799999999999999999999999988 999999999999999999999
Q ss_pred EEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhccCCCCCCCCeEECC
Q 016272 319 EERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 392 (392)
Q Consensus 319 ~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 392 (392)
+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.++|+|+.+|+++|+++|.
T Consensus 236 ~E~~i~~~dL~~adevfltns~~gv~pV~~i--d~~~~--~~g~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~v~ 306 (308)
T 2eiy_A 236 QVVRATRDQLYMADEVFMTGTAAEVTPVSMI--DWRPI--GKGTAGPVALRLREVYLEAVTGRRPEYEGWLTYVN 306 (308)
T ss_dssp EEECCCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHHHHHHHHHHHHTTCCGGGGGGEEECC
T ss_pred EEEeCCHHHHhhCCEEEEccCcceEEEEEEE--cCEEC--CCCCCCHHHHHHHHHHHHHHcCCCCCccCCCeeCC
Confidence 9999999999999999999999999999999 67765 666 7999999999999999999999999999873
No 10
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=2.2e-57 Score=438.38 Aligned_cols=268 Identities=22% Similarity=0.366 Sum_probs=231.2
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.||+|+|.+++.+++.|++||||||||||||+| +|+ +|++++|++||.+||++|+||.+ +.++|.+++++++
T Consensus 3 ~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~---~g~--~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~li 77 (277)
T 3daa_A 3 TLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVY---NGE--MFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELV 77 (277)
T ss_dssp EEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred EEECCEEeEhHHCeechhhhHHhcccEEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 455 89999999999999999999965 8999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCccccc-C--CCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCc
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLA-P--APEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKA 240 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~-p--~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt 240 (392)
+.|.. +.+.+||+ +++|.++ .|.. | +.+++++|++.|++++.....+++++.+.++ .| ...+++|+
T Consensus 78 ~~n~~-----~~~~lri~-vtrG~~~-r~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~-~r---~~~~~~Kt 146 (277)
T 3daa_A 78 EKNEL-----NTGHIYFQ-VTRGTSP-RAHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVED-IR---WLRCDIKS 146 (277)
T ss_dssp HHHTC-----CSEEEEEE-EESCBCS-CCSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEEC-CC---CSCTTSCB
T ss_pred HhcCC-----CcEEEEEE-EEecCCC-cCCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecC-cc---ccCCCcch
Confidence 99863 34566666 3456655 3333 3 4568899999998754211113566666543 23 23578998
Q ss_pred cCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEE
Q 016272 241 ISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEE 320 (392)
Q Consensus 241 ~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~E 320 (392)
+ ||+++++++++|+++|+||+||+| +|+|+|++++|||+++||+|+|||++++||+||||++||++|+++|++|+|
T Consensus 147 ~-nyl~~~la~~eA~~~g~~e~l~l~---~g~v~E~~~sNif~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~g~~v~e 222 (277)
T 3daa_A 147 L-NLLGAVLAKQEAHEKGCYEAILHR---NNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKE 222 (277)
T ss_dssp S-CCHHHHHHHHHHHHTTCSEEEEEE---TTEEEEETTBEEEEEETTEEEECCSSTTSCCCHHHHHHHHHHHHTTCCEEC
T ss_pred h-hhHHHHHHHHHHHHCCCCEEEEEc---CCEEEEcCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHHcCCeEEE
Confidence 5 999999999999999999999996 599999999999999999999999999999999999999999999999999
Q ss_pred EeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHh
Q 016272 321 RAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGI 376 (392)
Q Consensus 321 r~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~i 376 (392)
++++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+|++|++.|.+.
T Consensus 223 ~~i~~~el~~adevf~~ns~~~i~pV~~i--d~~~~--~~g~~g~~t~~L~~~~~~~ 275 (277)
T 3daa_A 223 IPFTTHEALKMDELFVTSTTSEITPVIEI--DGKLI--RDGKVGEWTRKLQKQFETK 275 (277)
T ss_dssp CCCBHHHHHTCSEEEEEETTTEEEEEEEE--TTEES--TTSSCCHHHHHHHHHHHTT
T ss_pred EeCCHHHHHhcCeeeeecChhhEEEEEEE--CCEEC--CCCCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 67765 766 899999999999753
No 11
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=3.9e-55 Score=420.44 Aligned_cols=262 Identities=19% Similarity=0.247 Sum_probs=231.5
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~ 164 (392)
.|.||+ ..+.+++.|++||||||+|||||+| +|+ +|++++|++||.+||++|+||.++.+++.+++.++++
T Consensus 2 ~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~~~ 72 (269)
T 1i2k_A 2 FLINGH----KQESLAVSDRATQFGDGCFTTARVI---DGK--VSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAA 72 (269)
T ss_dssp EEETTE----EESCCCTTCHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCC----cCCccCccccccccceeEEEEEEEE---CCE--EecHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 588998 3578999999999999999999998 676 8999999999999999999998889999999999998
Q ss_pred HcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCccccC-CCccEEEEeeccccccCCCCCCCCCcc
Q 016272 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKE-GLAPLNLYVEDEFHRATPGGAGGVKAI 241 (392)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y~~~-g~~pv~l~v~~~~~R~~p~g~g~~Kt~ 241 (392)
.+. ..|||+.+.++....|+.|+ .+++++|.+.|+++++.. ..+++++.+.+ +.|..+..++.+|+.
T Consensus 73 ~~~---------~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~~-~~~~~~~~~~~~Kt~ 142 (269)
T 1i2k_A 73 EQQ---------NGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSP-VRLGRNPHLAGIKHL 142 (269)
T ss_dssp HHC---------SEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEECS-CCBCCCTTTTBCCBS
T ss_pred hCC---------CeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEec-eecCCCCcccCcchh
Confidence 642 46899888766555677765 578899999999876521 13567887764 667666678999995
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEE
Q 016272 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 321 (392)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er 321 (392)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++.++|+||||++||++|+++|++|+|+
T Consensus 143 -n~~~~~~a~~~A~~~G~de~l~ld~--~G~v~E~s~sNif~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~ 219 (269)
T 1i2k_A 143 -NRLEQVLIRSHLEQTNADEALVLDS--EGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEV 219 (269)
T ss_dssp -CCHHHHHHHHHHTTSSCSEEEEEBT--TSBEEECSSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEE
T ss_pred -hhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCccCccCCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred eeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHH
Q 016272 322 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLV 374 (392)
Q Consensus 322 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~ 374 (392)
+++++||.+|||+|+|||+++|+||.+| +|+.+ ++ ||++++|++.|.
T Consensus 220 ~i~~~eL~~adevfltns~~gv~pV~~i--d~~~~--~~--g~~~~~l~~~~~ 266 (269)
T 1i2k_A 220 QASLEESLQADEMVICNALMPVMPVCAC--GDVSF--SS--ATLYEYLAPLCE 266 (269)
T ss_dssp CCBHHHHHTCSEEEEECSSSCEEEEEEE--TTEEC--CC--CHHHHHHHHHHH
T ss_pred ECCHHHHhhCCEEEEcCChhheEEEEEE--CCEEe--cC--cHHHHHHHHHHh
Confidence 9999999999999999999999999999 67765 43 799999999986
No 12
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=4.5e-54 Score=414.19 Aligned_cols=259 Identities=21% Similarity=0.272 Sum_probs=223.8
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~e~l~~~i~~lv 163 (392)
.|.|| .+++.|++.|++||||||||||||+| +|+ +|++++|++||.+||++|+||.| +.+++.+++.+++
T Consensus 6 ~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~ 76 (272)
T 3lul_A 6 VIEDK----GDMTPSFGIDDRIFLGEGLFETIRVN---SSK--PSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQKI 76 (272)
T ss_dssp ECCCC----C--CCCCCTTBGGGGTCEEEEEEEEE---TTE--ESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHH
T ss_pred EEECC----ccccccCCccchhhcceEeEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 68888 78889999999999999999999998 565 89999999999999999999987 9999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCCCC--eEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCcc
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPE--YTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAI 241 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~--~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~ 241 (392)
+.|.. ...|||+.+..+.+..|+.++.. ++++++ .|..+ ...++++.++ ++.|+.+++++++|++
T Consensus 77 ~~~~~-------~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~-~p~~~----~~~~v~l~~~-~~~r~~~~~~~~~Kt~ 143 (272)
T 3lul_A 77 QKDNL-------YHGGIKAILSGGPASRGLAERGQVSQLIFQT-FNYSI----QKHPVRLISI-NWLRDKANPLYQLKSV 143 (272)
T ss_dssp HHTTC-------SSEEEEEEEECCBCCSSTTCCCSSEEEEEEE-ECCCC----CCSCEEEEEE-EEEECTTCGGGGSCBS
T ss_pred HhcCC-------CCEEEEEEEEecCCccCcCCCCCCCcEEEEE-ECCCC----ccccEEEEEE-eEEecCCCcccchhhh
Confidence 98852 45788887775555577776543 455555 44322 2235787665 5889888889999995
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEE
Q 016272 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 321 (392)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er 321 (392)
||+++++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++.+||+||||++||++|+++|++|+|+
T Consensus 144 -nyl~~~la~~~A~~~G~de~L~ld~--~g~v~E~~~sNif~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e~ 220 (272)
T 3lul_A 144 -NYLEAIIAQRQAIAVGADDALFFNT--ENHVTETTCANLFLIENNILYTPRVEDGILPGITRARLISHCQQHKMSVQEI 220 (272)
T ss_dssp -CCHHHHHHHHHHHHTTCSEEEEEET--TSBEEEESSCEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEEC
T ss_pred -ccHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCCeEEEEEECCEEECCCCccCcCcCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred eeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHHhh
Q 016272 322 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQ 377 (392)
Q Consensus 322 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~iq 377 (392)
+++++||.+|||+|+|||+++|+||.+| +++.+ ++ |++|++.|.+..
T Consensus 221 ~i~~~el~~adevf~~ns~~~v~PV~~i--d~~~~--~~-----t~~l~~~y~~~~ 267 (272)
T 3lul_A 221 SLTKKRIEDADAVFLTNSLQGIRRVLSL--DNIIF--EV-----NHPIIDKLIFLL 267 (272)
T ss_dssp CCBHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--CC-----CCHHHHHHHHHH
T ss_pred ECCHHHHhhCCEEEEEcCchhEEEEEEE--CCEEc--ch-----HHHHHHHHHHHH
Confidence 9999999999999999999999999999 67775 43 788888887654
No 13
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=2.7e-54 Score=419.71 Aligned_cols=262 Identities=22% Similarity=0.284 Sum_probs=229.6
Q ss_pred eEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~ 164 (392)
.|.||+++ +.+++.|++||||||||||||+| +|+ +|++++|++||.+||++|+||.+ .+++.+++.++++
T Consensus 24 ~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~-~~~l~~~i~~~v~ 93 (292)
T 2xpf_A 24 DWVDGRPA----AELSVRDRGLAYGDGLFETLAVR---AGT--PRLLERHLARLEEGCRRLAIPLD-TAALRQELLAFCA 93 (292)
T ss_dssp EEETTEEC----SEEETTBHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHH
T ss_pred EEECCEEE----EEEcccchhhhcCcEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHH
Confidence 68999998 78999999999999999999997 676 78999999999999999999986 8899999999998
Q ss_pred HcCCCCCCCCCccEEEEEEEEecCCcccccCC--CCeEEEEEEeecCccccC-CCccEEEEeeccccccCCCCCCCCCcc
Q 016272 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFKE-GLAPLNLYVEDEFHRATPGGAGGVKAI 241 (392)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~--~~~~~~v~~~P~~~y~~~-g~~pv~l~v~~~~~R~~p~g~g~~Kt~ 241 (392)
... ..|||+.+..+.+.+|+.|+ .+++++|.+.|+++++.. ..+++++.+.+ +.|..+..++.+|+.
T Consensus 94 ~~~---------~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~-~~~~~~~~~~~~Kt~ 163 (292)
T 2xpf_A 94 ALG---------DGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACR-TRLAEQPLLAGLKHL 163 (292)
T ss_dssp HHC---------SEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECC-CCBCCCTTTTBCCBS
T ss_pred hCC---------CcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEee-eeccCCCCCCCcchh
Confidence 732 35899887744445777765 467889999999876521 12467888775 345555567899985
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEE
Q 016272 242 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 321 (392)
Q Consensus 242 ~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er 321 (392)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++.++|+||||++||++|+++|++|+|+
T Consensus 164 -ny~~~~la~~~A~~~G~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E~ 240 (292)
T 2xpf_A 164 -NRLEQVLARAEWSDAGHAEGLMLDV--HERVVEGVFSNLLLVLDGTLVAPDLRRCGVAGVMRAELLERAEGIGVPLAIR 240 (292)
T ss_dssp -CCHHHHHHHTTCCCTTCSEEEEEBT--TCCEEEESSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHTTCCEEEE
T ss_pred -hhHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEEeCCCCCccCCCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred eeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHH
Q 016272 322 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVG 375 (392)
Q Consensus 322 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~ 375 (392)
+++++||.+|||+|+|||+++|+||.+| +++.+ + +||+|++|++.|..
T Consensus 241 ~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~--~g~~t~~l~~~~~~ 288 (292)
T 2xpf_A 241 DVSMAELATADEVFLCNSQFGIWPVRAL--DEHVW--P--VGELTRKLQDQLRD 288 (292)
T ss_dssp CBCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--C--CCHHHHHHHHHHHH
T ss_pred eCCHHHHHhCCEEEEEcCcccEEEEEEE--CCEEe--C--CCHHHHHHHHHHHH
Confidence 9999999999999999999999999999 67765 4 68999999999875
No 14
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.7e-53 Score=418.09 Aligned_cols=268 Identities=20% Similarity=0.337 Sum_probs=197.3
Q ss_pred eEeC---Cee--eeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Q 016272 85 YFEK---GRL--SRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAV 159 (392)
Q Consensus 85 ~w~~---g~i--~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i 159 (392)
.|.| |+| +|.+++.|++.|++||||||||||||+| +|+ +|++++|++||.+||++|+||.|+.+++.+++
T Consensus 17 v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i 91 (315)
T 3sno_A 17 LIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIR---DGH--ACNVRRHGERFKASAALLGLPEPILEDWEKAT 91 (315)
T ss_dssp EEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred EEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCcCHHHHHHHH
Confidence 6888 999 9999999999999999999999999998 566 88999999999999999999998999999999
Q ss_pred HHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCC-CccEEEEeecc-c----------
Q 016272 160 KQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG-LAPLNLYVEDE-F---------- 227 (392)
Q Consensus 160 ~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g-~~pv~l~v~~~-~---------- 227 (392)
+++++.+. +..+.+..|||++++.+.+..| .++++|++.|+++++... .+++++.+.+. +
T Consensus 92 ~~~v~~~~---~~n~~~~~~iRl~vtrG~~~~g-----~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~ 163 (315)
T 3sno_A 92 QMGIESWY---SHPNAGEASCTWTLSRGRSSTG-----LASGWLTITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIG 163 (315)
T ss_dssp HHHHHHHH---TC--CCCEEEEEEEECCBTTTC-----CCEEEEEEEECCHHHHHHHHHCEEEEEEEC------------
T ss_pred HHHHHhhc---ccCCCCCEEEEEEEEeCCCCCC-----CCEEEEEEEECCCcchhhhcCCEEEEEecccccccccccccc
Confidence 99998732 1112357899998875443333 357888889987654211 13566655541 1
Q ss_pred -----------cccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCC
Q 016272 228 -----------HRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSG 296 (392)
Q Consensus 228 -----------~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~ 296 (392)
.|..|++++++|++ ||+.+++++++|+++|+||+||+|. +| |+|++++|||+++||+|+|||++.
T Consensus 164 ~~~r~~~s~~~~~~~p~~l~~~Kt~-nyl~~vla~~~A~~~G~de~l~l~~--~G-v~E~s~sN~f~~~~g~l~TPp~~~ 239 (315)
T 3sno_A 164 KATRGELSKVERTPAPWLTVGAKTL-AYAANMAALRYAKSNGFDDVIFTDG--DR-VLEGATSTVVSFKGDKIRTPSPGG 239 (315)
T ss_dssp ------------------------------------------CEEEEEEET--TE-EEEESSSEEEEEETTEEEEECCC-
T ss_pred ccccccccccccccCcccccCcchh-ccHHHHHHHHHHHHcCCCEEEEEeC--CC-cEEcCCeeEEEEECCEEEcCCCCC
Confidence 13456667899997 9999999999999999999999997 79 999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHH
Q 016272 297 TILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVG 375 (392)
Q Consensus 297 ~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~ 375 (392)
+||+||||++|+++|+++|++|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ + .++++++|++.|..
T Consensus 240 ~iL~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfl~ns~~gv~pV~~i--d~~~~--~--~~~~~~~l~~~~~~ 312 (315)
T 3sno_A 240 DILPGTTQAALFAHATEKGWRCKEKDLSIDDLFGADSVWLVSSVRGPVRVTRL--DGHKL--R--KPDNEKEIKALITK 312 (315)
T ss_dssp -----HHHHHHHHHHHHTTCEEEEECCBHHHHHHSSEEEEEETTTEEEEEEEE--SSSCC--C--CCTTHHHHHHHHHH
T ss_pred CcChhHHHHHHHHHHHHcCCEEEEEECCHHHHHhCCeeEEEcCcccEEEEEEE--CCEEC--C--CChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 67765 4 57889999998875
No 15
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=1.1e-53 Score=414.18 Aligned_cols=274 Identities=23% Similarity=0.266 Sum_probs=233.7
Q ss_pred ccCceeEEEeccceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCC-
Q 016272 72 PADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP- 150 (392)
Q Consensus 72 ~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~- 150 (392)
..-|+-+.-|. |.+|++++..++.+++.|++| |||+|||||+| +|+ +|++++|++||.+||++|+||.+
T Consensus 7 ~~~~~~~~~~~---~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~ 76 (285)
T 3csw_A 7 HHHHHHVLIWW---RGKFRRADEISLDFSLFEKSL--QGAVYETLRTY---SRA--PFAAYKHYTRLKRSADFFNLPLSL 76 (285)
T ss_dssp -----CCEEEE---TTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHTTTCCCSS
T ss_pred ccccceEEEEE---ccCceEcccccCEeCCccccc--ceeeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCCC
Confidence 33344444554 899999999999999999999 99999999998 566 89999999999999999999965
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeecccccc
Q 016272 151 SIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRA 230 (392)
Q Consensus 151 ~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~ 230 (392)
+.+++.+++.++++.+. +..|||+++.. . .++++|.+.|+++++. .+++++.+++ +.|.
T Consensus 77 ~~~~l~~~i~~~~~~~~--------~~~~iR~~v~~---------~-~~~~~i~~~p~~~~~~--~~~~~l~~~~-~~~~ 135 (285)
T 3csw_A 77 SFDEFTKVLKAGADEFK--------QEVRIKVYLFP---------D-SGEVLFVFSPLNIPDL--ETGVEVKISN-VRRI 135 (285)
T ss_dssp CHHHHHHHHHHHHTTCS--------SCEEEEEEECT---------T-TCCEEEEEEECCCCCC--TTCEEEEECS-SCCC
T ss_pred CHHHHHHHHHHHHHhhC--------CCeEEEEEEEc---------C-CCEEEEEEEeCCCccc--cCCeEEEEEe-EEec
Confidence 89999999999998763 34799987721 1 1257888899887652 3567787764 4453
Q ss_pred CCC-CCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHH
Q 016272 231 TPG-GAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIE 309 (392)
Q Consensus 231 ~p~-g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~ 309 (392)
.+. .++++|+. ||+++++++++|++ +||+|++|. +|+|+|++++|||+++||+|+|||++.++|+||||++||+
T Consensus 136 ~~~~~~~~~Kt~-~~l~~~la~~~A~~--~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~ 210 (285)
T 3csw_A 136 PDLSTPPALKIT-GRTDIVLARREIVD--CYDVILLGL--NGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIK 210 (285)
T ss_dssp CTTTSCTTCCBT-TCHHHHHHHTTCSS--SSEEEEECT--TSBEEEESSSEEEEEETTEEEEECGGGTCCCCHHHHHHHH
T ss_pred CCCCCCCccchh-ccHHHHHHHHHHHh--CCeEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCccCCHHHHHHHH
Confidence 332 34699997 69999999888877 999999997 7999999999999999999999999999999999999999
Q ss_pred HHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHHhhccCCCCCCCCe
Q 016272 310 IASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWT 388 (392)
Q Consensus 310 la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~ 388 (392)
+|+++|++|+|++++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.++|+|+. ++|+
T Consensus 211 ~a~~~g~~v~E~~i~~~dL~~adevfltns~~gv~PV~~i--d~~~~--~~g~~g~~t~~L~~~~~~~~~~~~---~~w~ 283 (285)
T 3csw_A 211 LAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRL--NEHSF--FEEEPGPVTATLMENFEPFVLNLE---ENWV 283 (285)
T ss_dssp HHHHTTCCEEEECCBHHHHHTCSEEEEEETTTEEEEEEEE--TTEES--CSSSCCHHHHHHHHHHHHHHHTCG---GGTT
T ss_pred HHHHCCCeEEEEeCCHHHHhhCCEEEEecCcceEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHhCcC---CCCC
Confidence 9999999999999999999999999999999999999999 67765 666 79999999999999999987 6896
No 16
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=3.5e-47 Score=360.91 Aligned_cols=226 Identities=19% Similarity=0.259 Sum_probs=192.0
Q ss_pred eEeCCeeeeCCCcccCcCCccccc-cCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Q 016272 85 YFEKGRLSRYGKIELSPSSGVLNY-GQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTA 163 (392)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~Y-G~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv 163 (392)
.|.||+.. +++.|++||| |||+|||||+| +|+ +|++++|++||.+||++|+||.+..+++.+++.+++
T Consensus 2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~l~~~i~~~~ 70 (246)
T 2zgi_A 2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAE---GGR--PLWLEEHLARLRRHALALGLSYPGDEAFLEDLEALL 70 (246)
T ss_dssp EEETTEEC------CCSSCHHHHHSCCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred EEECCccc------CCCccCcccccCeeEEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 47899855 3899999999 99999999998 565 899999999999999999999763488999999998
Q ss_pred HHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCC
Q 016272 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISN 243 (392)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~n 243 (392)
+.+. +.+.+|||+++.+++..+|+.|.+ .+..+++.. ++++.+.+ + |..|+ ++.+|+. |
T Consensus 71 ~~~~------~~~~~~vR~~v~~g~~~~~~~p~~--------~~~~~~~~~---g~~l~~~~-~-r~~~~-~~~~Kt~-n 129 (246)
T 2zgi_A 71 RAFP------KAPCLRLRFTVGEGVRLSEARPYA--------PLPLSLYRE---GVRVRLTG-Y-RVHPD-LARYKTG-N 129 (246)
T ss_dssp TSCT------TCSEEEEEEEEETTEEEEEEEECC--------CCCTHHHHH---CBCEEEEE-E-ECCTT-TTTSCBS-C
T ss_pred HhcC------CCCCEEEEEEEECCCCccCcCcCC--------CCchhHhhc---CeEEEEec-c-cCCCC-Cccchhh-h
Confidence 8762 135789999887654444442211 111223333 45666665 4 88887 8899997 8
Q ss_pred hHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEee
Q 016272 244 YAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAI 323 (392)
Q Consensus 244 Y~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i 323 (392)
|+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|| .++|+||||++||++|+++|++|+|+++
T Consensus 130 ~~~~~~a~~~A~~~g~de~l~ld~--~G~v~Egs~sNif~v~~g~l~TP---~~iL~GitR~~ll~~a~~~g~~v~E~~i 204 (246)
T 2zgi_A 130 YLPYRLALEEARKEGAFEGLLLDA--FGHVVDGSRTSPLLFREGTLYLL---EGGLEGITREKVAEAARGLGLRVERGLF 204 (246)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEEE---CSSCCCHHHHHHHHHHHHTTCEEEEECC
T ss_pred hHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEECC---CCccCcHHHHHHHHHHHHCCCeEEEEeC
Confidence 999999999999999999999997 79999999999999999999999 6899999999999999999999999999
Q ss_pred CHHHHhhcceeeEEcCcCceEEeEEE
Q 016272 324 PVDELLEADEVFCTGTAVVVAPVGSI 349 (392)
Q Consensus 324 ~~~eL~~adEvf~tgTa~~I~PV~~I 349 (392)
+++||.+ |+|+|||+++|+||.+|
T Consensus 205 ~~~dL~~--evfltns~~gi~pV~~i 228 (246)
T 2zgi_A 205 RPEGLRG--HLLLAGSGVGLLPVRPP 228 (246)
T ss_dssp CGGGCCS--EEEEEETTTEEEEBSSC
T ss_pred CHHHHHh--hHeeecChhheEEEEEE
Confidence 9999998 99999999999999887
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=2.7e-42 Score=322.54 Aligned_cols=207 Identities=17% Similarity=0.167 Sum_probs=181.5
Q ss_pred cccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEe
Q 016272 107 NYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVG 186 (392)
Q Consensus 107 ~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g 186 (392)
.-|+|+|||||+| ++|+ +|++++|++||.+||++|+||. +.+++.+++.++++ +. .+.+|||+++..
T Consensus 13 ~~g~glFEtir~~--~~G~--~~~l~~Hl~RL~~Sa~~l~~~~-~~~~l~~~i~~~~~-~~-------~~~~~iR~~~~~ 79 (221)
T 3qqm_A 13 TADFELIETMRWQ--PGTS--FLRFDRHLARLYGSAAELGFAC-DPQRIAEVLSDALD-GA-------RTAMRTRLALAR 79 (221)
T ss_dssp TSCCEEEEEEEEE--TTTE--ETTHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHT-TC-------CSCEEEEEEEET
T ss_pred CCCCEEEEEEEEe--cCCc--CcCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHh-cC-------CCCEEEEEEEEc
Confidence 3588999999998 3676 7899999999999999999995 78999999999987 42 357899988765
Q ss_pred cCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEe
Q 016272 187 SGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLD 266 (392)
Q Consensus 187 ~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld 266 (392)
++ .+.|.+.|+++++. .+++++.+++ +.|..++.+.++|+. ||+...+++++|+++|+||+|++|
T Consensus 80 ~g-----------~~~i~~~p~~~~~~--~~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~~~a~~~a~~~g~~e~l~l~ 144 (221)
T 3qqm_A 80 NG-----------DATASAQPYEPLAA--DKVWILRLAR-TRLDSQNTLLRHKTS-RRQLYTHARSEYLVTQADEVLLAN 144 (221)
T ss_dssp TS-----------CEEEEEEECCCCCT--TCCEEEEECS-CCBCTTCGGGGSCBS-CCHHHHHHHHTSCTTTCSEEEEEB
T ss_pred CC-----------CEEEEEEcCCCCCC--CCCEEEEEee-eEecCCCcchhchhc-chHHHHHHHHHHHhcCCcEEEEEC
Confidence 43 25678888887653 2467888775 567777788999995 999999999999999999999999
Q ss_pred CCCCCeEEeeCceeEEEEEC-CEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCceEE
Q 016272 267 SVNKKNLEEVSSCNIFILKG-NIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAP 345 (392)
Q Consensus 267 ~~~~g~V~E~s~sNiF~v~~-~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~P 345 (392)
. +|+|+|++++|||++++ |+|+|||++.++|+||||+.+|+++ +|+|+.++++||.+|||+|+|||+++|+|
T Consensus 145 ~--~g~v~E~s~sNif~~~~~~~l~TP~~~~~~L~GitR~~ll~~~-----~v~e~~i~~~~L~~adevf~~ns~~gi~p 217 (221)
T 3qqm_A 145 E--RGEICEGTITNVFADFGDGVLATPRLDCGLLPGVLRAELLDEG-----RAEEAIYSYDDLKSAKALFVGNSLRGLIP 217 (221)
T ss_dssp T--TSCEEEESSCEEEEECSSSCEEEECGGGTCCCCHHHHHHHHTT-----SEEEECCCHHHHTTCSEEEEEETTTEEEE
T ss_pred C--CCeEEEcCceeEEEEeCCCEEECCCCccCcchHHHHHHHHhhC-----cEEEEeCCHHHHHhCCEEEEEecceeEEE
Confidence 7 79999999999999998 9999999999999999999999974 89999999999999999999999999999
Q ss_pred eEE
Q 016272 346 VGS 348 (392)
Q Consensus 346 V~~ 348 (392)
|.-
T Consensus 218 V~l 220 (221)
T 3qqm_A 218 AKL 220 (221)
T ss_dssp EEE
T ss_pred EEE
Confidence 973
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=7.3e-39 Score=293.15 Aligned_cols=189 Identities=14% Similarity=0.133 Sum_probs=154.1
Q ss_pred cccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHH-HHcCCC--CC-CHHHHHHHHHHHHHHcCCCCCCCCCccEEEEE
Q 016272 107 NYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGA-ERMCMP--SP-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRP 182 (392)
Q Consensus 107 ~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa-~~l~ip--~~-~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp 182 (392)
+||+|+|||||+| +|+ +|++++|++||.+|| ++|+|| .+ +.+++.+++. +++.+. .+.+|||+
T Consensus 2 ~~g~~vfEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~-------~~~~~iR~ 68 (194)
T 3ceb_A 2 MWQFPLFETILIE---QGQ--AKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHR-------EGLIRCRI 68 (194)
T ss_dssp CTTCCEEEEEEEE---TTE--ECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCS-------SSEEEEEE
T ss_pred CCCCeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCC-------CCCEEEEE
Confidence 6999999999998 676 889999999999999 999999 44 8899999888 777654 36899998
Q ss_pred EEEecCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceE
Q 016272 183 LLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDV 262 (392)
Q Consensus 183 ~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~ 262 (392)
++..+. .+ +...|..+ .++.... ....+..++++|+. ||+ ++++.+|+++|+||+
T Consensus 69 ~~~~g~--~~----------~~~~p~~~---~~~~~~~-------~~~~~~~~~~~Kt~-n~~--~~~~~~A~~~g~de~ 123 (194)
T 3ceb_A 69 DYNHHD--YV----------LQCFPYQQ---KVYRTFK-------PVFCDHIDYSLKFS-DRT--LLNNLLKQKEECDEI 123 (194)
T ss_dssp EECSSC--EE----------EEEEEECC---CCCCCEE-------EEECSSCCCSSCBS-CCH--HHHHHHGGGTTSSEE
T ss_pred EEeCCc--cE----------EEEecCCC---CcEEEEE-------EecCCCcchhhccc-CHH--HHHHHHHhhCCCCEE
Confidence 765431 11 22333221 1221111 11234467899995 898 568889999999999
Q ss_pred EEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHhhcceeeEEcCcCc
Q 016272 263 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVV 342 (392)
Q Consensus 263 L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~ 342 (392)
||+ . +|+|+|++++|||+++||+|+||| .++|+||||++||+ +++|+|++++++||.+|||+|+|||+++
T Consensus 124 l~l-~--~G~v~E~s~sNif~~~~g~l~TP~--~~~L~GitR~~ll~-----~~~v~e~~i~~~eL~~adevfl~ns~~g 193 (194)
T 3ceb_A 124 MII-R--QGKVTDCSIGNLIFRQNNQWITPD--KPLLEGTQRAKLLE-----QKKIIAREIFFEDLAQYEEIRLINAMNG 193 (194)
T ss_dssp EEE-E--TTEECCCSSSEEEEEETTEEEEES--SCSSCCHHHHHHHH-----TTSSEEECCBGGGGGGCSCEEEEBTTBC
T ss_pred EEE-e--CCEEEEeccEEEEEEECCEEECCC--CCCcChHHHHHHHc-----CCCEEEecCCHHHHhhccEEEEEecccC
Confidence 999 5 799999999999999999999999 68999999999998 4799999999999999999999999987
Q ss_pred e
Q 016272 343 V 343 (392)
Q Consensus 343 I 343 (392)
|
T Consensus 194 i 194 (194)
T 3ceb_A 194 L 194 (194)
T ss_dssp C
T ss_pred C
Confidence 5
Done!