BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016286
(392 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic
OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1
Length = 541
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/387 (66%), Positives = 294/387 (75%), Gaps = 36/387 (9%)
Query: 1 MASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCG 60
+ +S S+ SPLCTW VAACMS + G D Q ++ + +R LS KC
Sbjct: 2 VGASSSYASPLCTWFVAACMSVSHGGGDSRQAVALQSGGRSRRRRQLS---------KCS 52
Query: 61 VGGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNN 120
V SGS+ SIQ+L+ SCL F PC Y + +N SS FGSN
Sbjct: 53 VA------------SGSA-SIQALVTSCLDFGPCTHYNN---------NNALSSLFGSN- 89
Query: 121 STATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGH 180
+ +LNR QRRL NR SG AMAV ++ ++E KKP +Q+RVVVTGMG+ + LGH
Sbjct: 90 -SVSLNRNQRRL--NRAASSGGAMAV-MEMEKEAAVNKKPPTEQRRVVVTGMGVETSLGH 145
Query: 181 EPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240
+P FY NLL+G SGIS+IE FDC+ FPT+IA EIKSFST+GWVAPKLSKRMDKFMLYLL
Sbjct: 146 DPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLL 205
Query: 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPF 300
TAGKKALADGG+T++VM E DK+KCGVLIGS +GGMKVFYDAIEALRISYKKMNPFCVPF
Sbjct: 206 TAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPF 265
Query: 301 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP 360
ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN+ANHII+GEA+VMLCGGSDA +IP
Sbjct: 266 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGEADVMLCGGSDAVIIP 325
Query: 361 IGLGGFVACRALSQRNNDPTKASRPWD 387
IGLGGFVACRALSQRNNDPTKASRPWD
Sbjct: 326 IGLGGFVACRALSQRNNDPTKASRPWD 352
>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2
Length = 473
Score = 281 bits (718), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 129/235 (54%), Positives = 176/235 (74%), Gaps = 1/235 (0%)
Query: 154 VTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAA 213
V+ K+ +KRVV+TGMGLVS G++ D +Y LL G SGIS I+ FD + FPT+
Sbjct: 50 VSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGG 109
Query: 214 EIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273
+I+ FS++G++ K +R+D + Y + AGKKAL + D +N +DK K GVL+G+G+
Sbjct: 110 QIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGM 169
Query: 274 GGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 332
GG+ VF + ++ L +++++PF +P+A TNMGSA+LA+DLG MGPNYSISTACATSN+
Sbjct: 170 GGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNY 229
Query: 333 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
C AANHI RGEA++M+ GG++AA+IPIGLGGFVACRALSQRN+DP ASRPWD
Sbjct: 230 CFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWD 284
>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Hordeum vulgare GN=KAS12 PE=1 SV=1
Length = 462
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 171/227 (75%), Gaps = 3/227 (1%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+KRVV+TGMGL S G + D FY+ LL G SG+ I+ FD +SFPT+ A +I+ FS++G+
Sbjct: 47 RKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRGFSSEGY 106
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ K +R+D + Y + +GKKAL G+ D +LD + GVL+G+G+GG+ VF D
Sbjct: 107 IDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMGGLSVFSD 166
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
++ L Y+K++PF +P+A TNMGSA+LA+D+G+MGPNYSISTACATSN+C AANH
Sbjct: 167 GVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCFYAAANH 226
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
I RGEA++++ GG++AA+IPIGLGGFVACRALSQRN+DP A RPWD
Sbjct: 227 IRRGEADIIVAGGTEAAIIPIGLGGFVACRALSQRNDDPITACRPWD 273
>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fabF PE=3 SV=3
Length = 414
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 146/227 (64%), Gaps = 4/227 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ +NE + ++ GV IGSG+GG+++
Sbjct: 61 QYMSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIET 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWD 224
>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1
Length = 414
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 142/227 (62%), Gaps = 4/227 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M+++RVV+TG+G+VSPLG++ + LL G SG+ I FD +SFPT+IAAE++ F
Sbjct: 1 MEKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPA 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ K ++ D F+ + + + ++A D G+ +NE + + GV IGSG+GGM
Sbjct: 61 LVLDLKSIRKTDVFVQFAMESARQAWEDSGLE---INETNAPRVGVAIGSGIGGMPWIEK 117
Query: 282 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+AL S +K++PF +P A NM S M+++ GPN SI TAC T I +AA
Sbjct: 118 NYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
I +A+ M+ GG++ A P+G+GGF A RALS RN++P KASRPWD
Sbjct: 178 IAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWD 224
>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi
GN=fabF PE=3 SV=2
Length = 415
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 142/227 (62%), Gaps = 4/227 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LLEG SGI IE FD T+F T+ A +K F
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCT 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ + E + ++ GV IGSG+GG+ +
Sbjct: 61 EYMSKKDARKMDLFIQYGIAAGIQALDDSGLE---ITEENAARVGVAIGSGIGGLDLIEA 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
I G+A M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD
Sbjct: 178 IAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWD 224
>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1
Length = 416
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 137/228 (60%), Gaps = 4/228 (1%)
Query: 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFST 220
++++KRVVVTG+G ++P+G+ ++ L+EG +GI I FD + + E+K F
Sbjct: 3 NLEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDA 62
Query: 221 DGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY 280
++ K +KRMD+F + + A ++A+ D + V+NEL+ + GVLIG+G+GG+KV
Sbjct: 63 TQFLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLE 119
Query: 281 DAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 339
D L + +PF +P NM S + A++LG GPN TACA + I +A
Sbjct: 120 DQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFR 179
Query: 340 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+ G A M+CGG++AA+ P+ GF + RALS RN+DP ASRP+D
Sbjct: 180 LVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFD 227
>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis
(strain 168) GN=fabF PE=3 SV=1
Length = 413
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 137/227 (60%), Gaps = 5/227 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M +KRVVVTG+G +SPLG++ D +NN + GVSGI I D +P K+AAE+K F+ +
Sbjct: 1 MTKKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K +++MD+F Y + A K A+ D + ++ +E+ + GV +GSG+GG++
Sbjct: 61 DYMDKKEARKMDRFTQYAVVAAKMAVEDADL--NITDEI-APRVGVWVGSGIGGLETLES 117
Query: 282 AIEA-LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
E L ++++PF VP +M + +++ LG G N TACAT I +A
Sbjct: 118 QFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKV 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
I RG+A+VM+ GG++A + + GF A +ALS N DP ASRP+D
Sbjct: 178 IQRGDADVMVTGGTEAPLTRMSFAGFSANKALST-NPDPKTASRPFD 223
>sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MW2) GN=fabF PE=1 SV=1
Length = 414
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 134/225 (59%), Gaps = 5/225 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPF 223
>sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MSSA476) GN=fabF PE=3 SV=1
Length = 414
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 134/225 (59%), Gaps = 5/225 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPF 223
>sp|Q5HHA1|FABF_STAAC 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain COL) GN=fabF PE=1 SV=1
Length = 414
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 134/225 (59%), Gaps = 5/225 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPF 223
>sp|Q7A6F8|FABF_STAAN 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain N315) GN=fabF PE=1 SV=1
Length = 414
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 134/225 (59%), Gaps = 5/225 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +N+ + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INDNTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPF 223
>sp|Q99VA6|FABF_STAAM 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1
Length = 414
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 134/225 (59%), Gaps = 5/225 (2%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +N+ + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INDNTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPF 223
>sp|Q6GIA3|FABF_STAAR 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MRSA252) GN=fabF PE=3 SV=1
Length = 414
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 132/222 (59%), Gaps = 5/222 (2%)
Query: 166 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVA 225
RVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ + +
Sbjct: 6 RVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHID 65
Query: 226 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEA 285
K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A +
Sbjct: 66 KKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIAHKQ 122
Query: 286 L-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRG 344
L ++++PF VP +M + +++DLG GPN + TACAT I A + RG
Sbjct: 123 LMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRG 182
Query: 345 EANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
+A+ M+ GG++A + + + GF A RALS N+D A RP+
Sbjct: 183 DADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPF 223
>sp|P0AAI8|FABF_SHIFL 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri
GN=fabF PE=3 SV=2
Length = 413
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 133/226 (58%), Gaps = 2/226 (0%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K ++MD F+ Y + AG +A+ D G+ ++ E + G + +
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGL--EITEENATRIGAAIGSGIGGLGLIEEN 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ +K++PF VP NM + L + G GP+ SI+TAC + I +AA I
Sbjct: 119 HTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARII 178
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD
Sbjct: 179 AYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWD 224
>sp|P0AAI5|FABF_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
(strain K12) GN=fabF PE=1 SV=2
Length = 413
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 133/226 (58%), Gaps = 2/226 (0%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K ++MD F+ Y + AG +A+ D G+ ++ E + G + +
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGL--EITEENATRIGAAIGSGIGGLGLIEEN 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ +K++PF VP NM + L + G GP+ SI+TAC + I +AA I
Sbjct: 119 HTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARII 178
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD
Sbjct: 179 AYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWD 224
>sp|P0AAI6|FABF_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabF PE=3
SV=2
Length = 413
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 133/226 (58%), Gaps = 2/226 (0%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K ++MD F+ Y + AG +A+ D G+ ++ E + G + +
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGL--EITEENATRIGAAIGSGIGGLGLIEEN 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ +K++PF VP NM + L + G GP+ SI+TAC + I +AA I
Sbjct: 119 HTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARII 178
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD
Sbjct: 179 AYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWD 224
>sp|P0AAI7|FABF_ECO57 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O157:H7 GN=fabF PE=3 SV=2
Length = 413
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 133/226 (58%), Gaps = 2/226 (0%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K ++MD F+ Y + AG +A+ D G+ ++ E + G + +
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGL--EITEENATRIGAAIGSGIGGLGLIEEN 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ +K++PF VP NM + L + G GP+ SI+TAC + I +AA I
Sbjct: 119 HTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARII 178
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD
Sbjct: 179 AYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWD 224
>sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti
(strain 1021) GN=fabF PE=3 SV=2
Length = 421
Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 139/232 (59%), Gaps = 11/232 (4%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-------S 217
+RVV+TG G+VSPLG +V + LL G + ++ F+ P KIA I +
Sbjct: 2 RRVVITGTGMVSPLGCGTEVSWARLLTGDNAARKVTEFEVEDLPAKIACRIPFGDGSDGT 61
Query: 218 FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
F+ D W+ PK +++D F++Y + A ALAD G + ++ D+ GVLIGSG+GG++
Sbjct: 62 FNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPE--SDEDQISTGVLIGSGIGGLE 119
Query: 278 VFYDAIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN 336
DA LR ++++PF +P N+ + +++ GPN+S+ TAC+T I +
Sbjct: 120 GIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGD 179
Query: 337 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALS-QRNNDPTKASRPWD 387
A+ I G+A+VM+ GG+++ + I L GF AC+ALS Q N++P KASRP+D
Sbjct: 180 ASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYD 231
>sp|Q5TKS0|FABF_STAAU 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment)
OS=Staphylococcus aureus GN=fabF PE=3 SV=1
Length = 403
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Query: 168 VVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPK 227
V+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ + + K
Sbjct: 1 VITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKK 60
Query: 228 LSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL- 286
++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A + L
Sbjct: 61 EARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIAHKQLM 117
Query: 287 RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA 346
++++PF VP +M + +++DLG GPN + TACAT I A + RG+A
Sbjct: 118 DKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDA 177
Query: 347 NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
+ M+ GG++A + + + GF A RALS N+D A RP+
Sbjct: 178 DAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPF 216
>sp|Q0VCA7|OXSM_BOVIN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos
taurus GN=OXSM PE=2 SV=1
Length = 460
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 10/230 (4%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK------S 217
++RVV+TG+GLV+PLG + ++ L+ G SGI + + S P +AA +
Sbjct: 42 RRRVVITGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDEYQSIPCSVAAYVPRGCDEGQ 101
Query: 218 FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
F+ +V +K M + + A + AL D G +E D++ GV IG G+ ++
Sbjct: 102 FNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQ--SEADQAATGVAIGMGMVPLE 159
Query: 278 VFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN 336
V + + Y K++PF VP NM S +++ GPN+++STAC T + +
Sbjct: 160 VISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAVGD 219
Query: 337 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
+ + G+A+VM+ GG+D+ + P+ L GF RALS N DP A RP+
Sbjct: 220 SFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALST-NTDPKSACRPF 268
>sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus
musculus GN=Oxsm PE=2 SV=1
Length = 459
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 123/232 (53%), Gaps = 10/232 (4%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK----- 216
M ++RVV+TG+GLV+PLG + ++ LL G SGI + + + P +AA +
Sbjct: 39 MLRRRVVITGIGLVTPLGVGTQLVWDRLLRGESGIVSVVGDEYKNIPCSVAAYVPRGPHE 98
Query: 217 -SFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG 275
F+ + +V+ +K M + + A + AL D G E D+ GV IG G+
Sbjct: 99 GQFNEENFVSKSDAKSMSSSTIMAVGAAELALKDSGWHPK--READQVATGVAIGMGMVP 156
Query: 276 MKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 334
++V + + Y K++PF VP NM + +++ GPN+S+STAC T +
Sbjct: 157 LEVISETALLFQTKGYNKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAV 216
Query: 335 LNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
++ I G+A+VM+ GG+D+ + P+ L GF RALS N DP A RP+
Sbjct: 217 GDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSS-NPDPKLACRPF 267
>sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo
sapiens GN=OXSM PE=1 SV=1
Length = 459
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 10/230 (4%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG- 222
+RVV+TG+GLV+PLG + ++ L+ G SGI + + S P +AA + S +G
Sbjct: 41 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQ 100
Query: 223 -----WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
+V+ K M + + A + A+ D G +E D+ GV IG G+ ++
Sbjct: 101 FNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGMGMIPLE 158
Query: 278 VFYD-AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN 336
V + A+ Y K++PF VP NM + +++ GPN+++STAC T + +
Sbjct: 159 VVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGD 218
Query: 337 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386
+ I G+A+VM+ GG+D+ + P+ L GF RALS N+DP A RP+
Sbjct: 219 SFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALST-NSDPKLACRPF 267
>sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Arabidopsis thaliana GN=KAS PE=1 SV=1
Length = 461
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 52/293 (17%)
Query: 123 ATLNRRQR----RLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPL 178
AT N R+ RLRLNR ++T H +RVVVTG+G+V+PL
Sbjct: 2 ATSNLRRHLSASRLRLNRF----------------ISTSSSYH-SHRRVVVTGLGMVTPL 44
Query: 179 GHEPDVFYNNLLEGVSGI----------------SEIETFDCTSFPTKIAAEIKSFSTDG 222
G + + L++G GI +++ TFD S +K+AA + S G
Sbjct: 45 GRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLS--SKVAAFVPYGSNPG 102
Query: 223 WVAPKL---SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF 279
L SK + F+ Y + A +AL D E +++ + G
Sbjct: 103 EFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGI-----GSI 157
Query: 280 YDAIEALRI----SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCIL 335
D +EA ++ ++++PF +P NM S ++M G+ GPN++ TACAT I
Sbjct: 158 CDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIG 217
Query: 336 NAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWD 387
+A I G+A+VM+ GG+++++ + + GF RALS + N+ P +ASRP+D
Sbjct: 218 DATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFD 270
>sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC887.13c PE=3 SV=1
Length = 426
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 123/232 (53%), Gaps = 11/232 (4%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETF-DCTSFPTKIAA------EIKS 217
KRVV+TG+G V+PLG+ + NL++G SGI ++ F + P+K+A E +
Sbjct: 2 KRVVITGLGAVTPLGNGVKTNWRNLIQGKSGIVSLKGFPEYEQIPSKVAGVIPRGKEKEE 61
Query: 218 FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
++ +V + + F LT+ +AL D + ++E +K GV G+G+G +
Sbjct: 62 WNVLDYVDQGKLREVATFTQLALTSAAEALKDARWID--IDEQEKLATGVCFGTGIGNLD 119
Query: 278 VFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN 336
+ L + +K++P + NM + ++ G+ N++ +TACA I +
Sbjct: 120 DALNENGVLNKAGIRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAGCHAIGD 179
Query: 337 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWD 387
A N I G A+V++ GGS++ + P+ + GF R+LS + ND P ASRP+D
Sbjct: 180 AFNFIKLGHADVIIAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFD 231
>sp|P43678|KAS1_STRRM Oxytetracycline polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces rimosus PE=3 SV=2
Length = 425
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 15/232 (6%)
Query: 165 KRVVVTGMGLVSP--LGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+RVV+TG+G+V+P +G +P F+ L G + I +FD + F +++AAE
Sbjct: 8 RRVVITGIGVVAPGDVGTKP--FWEMLTAGRTATRPISSFDASPFRSQVAAECDFDPAAE 65
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG---GMKVF 279
++ + + D+ M + A ++ALAD G+T E D + GV+ G+ G +
Sbjct: 66 GLSQRQVRAWDRTMQFAYVAAREALADSGVT----GEADPLRTGVMAGTACGMTMSLDRE 121
Query: 280 YDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM----GPNYSISTACATSNFCIL 335
Y + ++ + VP+ + +A ++ W+ GP +S C + +
Sbjct: 122 YAVVSDEGRLWQVDDAHGVPYLYDYFVPSSMAAEIAWLAEAEGPAGVVSAGCTSGIDVLT 181
Query: 336 NAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+AA+ + G A VM+ G SDAA+ PI + F A +A + RN++P ASRP+D
Sbjct: 182 HAADLVRDGAAEVMVAGASDAAISPITVACFDAIKATTPRNDEPETASRPFD 233
>sp|P23155|KAS1_STRCO Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)
GN=SCO5318 PE=3 SV=1
Length = 423
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 10/233 (4%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RV VTG+G+V+P G F+ L EG + I FD + ++IAAE +D
Sbjct: 1 MTRRRVAVTGIGVVAPGGIGTPQFWRLLSEGRTATRRISLFDPSGLRSQIAAECDFEPSD 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM-KVFY 280
+ ++R D+++ + L A +A+ D + MN D + G +G+ +GG ++ +
Sbjct: 61 HGLGLATAQRCDRYVQFALVAASEAVRDANLD---MNREDPWRAGATLGTAVGGTTRLEH 117
Query: 281 DAI------EALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 334
D + + ++ P T S+ +A + G GP ++ST C + +
Sbjct: 118 DYVLVSERGSRWDVDDRRSEPHLERAFTPATLSSAVAEEFGVRGPVQTVSTGCTSGLDAV 177
Query: 335 LNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
A + + G +V L G +D+ + PI + F A +A S N+DP ASRP+D
Sbjct: 178 GYAYHAVAEGRVDVCLAGAADSPISPITMACFDAIKATSPNNDDPAHASRPFD 230
>sp|P16540|KAS1_STRVN Granaticin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces violaceoruber GN=gra-orf1 PE=3 SV=1
Length = 421
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVV+TG+G+ +P G F++ L G + I FD + F ++IA EI +
Sbjct: 3 RRVVITGVGVRAPGGSGTKEFWDLLTAGRTATRPISFFDASPFRSRIAGEIDFDAVAEGF 62
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK------- 277
+P+ +RMD+ + + + ALAD G+ LD S+ GV +GS +
Sbjct: 63 SPREVRRMDRATQFAVACTRDALADSGLD---TGALDPSRIGVALGSAVASATSLENEYL 119
Query: 278 VFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNA 337
V D+ + ++P + + + A +A G GP +S C + + A
Sbjct: 120 VMSDSGREWLVDPAHLSPMMFDYLSPGVMPAEVAWAAGAEGPVTMVSDGCTSGLDSVGYA 179
Query: 338 ANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
G A+V++ G +D V PI + F A +A + RN+DP ASRP+D
Sbjct: 180 VQGTREGSADVVVAGAADTPVSPIVVACFDAIKATTPRNDDPAHASRPFD 229
>sp|Q02059|KASA_STRCO Actinorhodin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=SCO5087 PE=1 SV=2
Length = 467
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 10/244 (4%)
Query: 151 DEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTK 210
D K+ ++RVV+TG+G+ +P G+ F+ L G + I FD + + ++
Sbjct: 32 DHRTNASKELFGLKRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQ 91
Query: 211 IAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIG 270
+AAE P+ RMD+ + + ++A A G+ D LD ++ GV +G
Sbjct: 92 VAAEADFDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDT---LDPARVGVSLG 148
Query: 271 SGLGGMK-------VFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323
S + + D+ + ++ + ++ A +A +G GP +
Sbjct: 149 SAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMV 208
Query: 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 383
ST C + + NA I G A+VM G +D + PI + F A RA + RN+DP AS
Sbjct: 209 STGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHAS 268
Query: 384 RPWD 387
RP+D
Sbjct: 269 RPFD 272
>sp|Q05356|KAS1_STRHA Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
halstedii GN=sch1 PE=3 SV=1
Length = 422
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G+V+P G F++ L G + I FD ++IAAE + +
Sbjct: 3 RRVVVTGIGVVAPGGIGAARFWDLLAGGRTATRRISLFDPARLRSQIAAECDFDPSAHGL 62
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM-KVFYDAI 283
+ +R D+++ + L A +A+ D G+ D E D + G ++G+ +GG ++ +D +
Sbjct: 63 DDETVRRCDRYVQFALVATAEAVRDAGL--DTTRE-DPWRMGAVLGTAVGGTTRLEHDYV 119
Query: 284 ------EALRISYKKMNPFC-VPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN 336
+ +++ P FA + + S +A G GP ++ST C + +
Sbjct: 120 LVSEGGSRWDVDHRRAEPHLHRAFAPSTLAS-TVAETFGAQGPVQTVSTGCTSGLDAVGY 178
Query: 337 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
A + I G A+V L G SD+ + PI + F A +A S N+DP ASRP+D
Sbjct: 179 AYHAIAEGRADVCLAGASDSPISPITMACFDAIKATSPSNDDPEHASRPFD 229
>sp|P0A953|FABB_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
(strain K12) GN=fabB PE=1 SV=1
Length = 406
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 9/227 (3%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KR V+TG+G+VS +G+ +L EG SGI+ + + + + +K T G +
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG--MKVF-YD 281
K+ + M +Y + ++A+AD G++ + + + G++ GSG G +VF D
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQ--NNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
A+ R K + P+ V A + SA LA G NYSIS+ACATS CI NA I
Sbjct: 119 AMRGPR-GLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQI 177
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWD 387
G+ +++ GG + + F A ALS + ND P KASR +D
Sbjct: 178 QLGKQDIVFAGGGEELCWEMAC-EFDAMGALSTKYNDTPEKASRTYD 223
>sp|P0A954|FABB_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabB PE=3
SV=1
Length = 406
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 9/227 (3%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KR V+TG+G+VS +G+ +L EG SGI+ + + + + +K T G +
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG--MKVF-YD 281
K+ + M +Y + ++A+AD G++ + + + G++ GSG G +VF D
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQ--NNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
A+ R K + P+ V A + SA LA G NYSIS+ACATS CI NA I
Sbjct: 119 AMRGPR-GLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQI 177
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWD 387
G+ +++ GG + + F A ALS + ND P KASR +D
Sbjct: 178 QLGKQDIVFAGGGEELCWEMAC-EFDAMGALSTKYNDTPEKASRTYD 223
>sp|Q02578|KAS1_STRCN Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cyaneus GN=curA PE=3 SV=1
Length = 422
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RV VTG+G+V+P G F++ L G + I FD ++IAAE +
Sbjct: 3 RRVAVTGIGVVAPGGIGVPAFWDLLSSGRTATRGITLFDPEGLRSRIAAECDFDPLAHGL 62
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM-KVFYDAI 283
P+L +R D+++ + L A +A+ D GI N + V +GS +GG ++ +D +
Sbjct: 63 DPELVERADRYIQFALVAADEAVTDSGIDFGTENPW---RVAVSLGSAVGGTTRLEHDYV 119
Query: 284 ------EALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNA 337
+ + ++ P + + +A +A G GP ++ST C + + A
Sbjct: 120 LVSERGQRWDVDHRAAEPELHRAFSPSTLAADVAERFGAQGPVQTVSTGCTSGLDAVGYA 179
Query: 338 ANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+ I G A+V + G SD+ + PI + F A +A S N+DP ASRP+D
Sbjct: 180 FHTIEEGRADVCIAGASDSPISPITMACFDAIKATSPNNDDPEHASRPFD 229
>sp|P39525|CEM1_YEAST 3-oxoacyl-[acyl-carrier-protein] synthase homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CEM1 PE=1
SV=1
Length = 442
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 27/245 (11%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC---------TSFPTKIAAEI 215
+RVV+TG+G V+PLG + NLL +G++ I + S P+ I
Sbjct: 3 RRVVITGLGCVTPLGRSLSESWGNLLSSKNGLTPITSLPNYNEDYKLREKSIPSTITVGK 62
Query: 216 --KSFSTDGWVAPKL------SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKC-- 265
++F + KL +R F+ L +AL + G+ ++ S C
Sbjct: 63 IPENFQNENSAINKLLFTSQDERRTSSFIKLALRTTYEALHNAGLLNPNDITINTSLCNL 122
Query: 266 ---GVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322
G LIGSG+G ++ Y K++NP+ VP TNM + +++ G ++S
Sbjct: 123 DHFGCLIGSGIGSIQDIYQTSLQFHNDNKRINPYFVPKILTNMAAGNVSIKFNLRGLSHS 182
Query: 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKA 382
+STACAT N I +A N I G ++ + G S+ ++ P+ L GF+ ++++
Sbjct: 183 VSTACATGNNSIGDAFNFIRLGMQDICVAGASETSLHPLSLAGFIRAKSITTNG-----I 237
Query: 383 SRPWD 387
SRP+D
Sbjct: 238 SRPFD 242
>sp|P16538|KAS1_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces glaucescens GN=tcmK PE=3 SV=1
Length = 426
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+KRVV+TG+G+ +P G F++ L G + I FD + ++IA EI
Sbjct: 6 EKRVVITGIGVRAPGGAGTAAFWDLLTAGRTATRTISLFDAAPYRSRIAGEIDFDPIGEG 65
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLG---GMKVFY 280
++P+ + D+ + ++AL D G+ +N + GV IG+ +G G+ Y
Sbjct: 66 LSPRQASTYDRATQLAVVCAREALKDSGLDPAAVN---PERIGVSIGTAVGCTTGLDREY 122
Query: 281 DAIEA--------LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 332
+ ++ +++ + VP + +A + G GP +ST C TS
Sbjct: 123 ARVSEGGSRWLVDHTLAVEQLFDYFVPTSICRE----VAWEAGAEGPVTVVSTGC-TSGL 177
Query: 333 CILNAANHIIR-GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+ +IR G A+V++CG +DA + PI + F A +A S N+DP ASRP+D
Sbjct: 178 DAVGYGTELIRDGRADVVVCGATDAPISPITVACFDAIKATSANNDDPAHASRPFD 233
>sp|P72331|NODE_RHIS3 Nodulation protein E OS=Rhizobium sp. (strain N33) GN=nodE PE=3
SV=1
Length = 402
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 5/222 (2%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TG+G + LG + + + EG S I I T + I AEIK+
Sbjct: 2 DRRVVITGIGGLCGLGTDAPSIWKEMREGRSAIGPIVTSELHGLTGTIGAEIKTLPEHDI 61
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+L MD+F L + A ++A+ G++ D E + + G ++G G G + +
Sbjct: 62 DRKQLVT-MDRFSLLAVLAAREAMRQAGLSCD---ERNAYRFGAIVGVGGSGWEAIEASY 117
Query: 284 EALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
AL ++ ++ VP A + + ++M LG GP + +++ACA++N I +A + I
Sbjct: 118 RALLLNGARRAGVMDVPKAMPSAAAGQVSMSLGLRGPVFGVTSACASANHAIASAVDQIR 177
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384
G A+VML GGSDA + + + A R ++ P + R
Sbjct: 178 CGRADVMLAGGSDAPFVFCVVKAWEAMRVIAPDTCRPFSSDR 219
>sp|P43710|FABB_HAEIN 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=fabB PE=3 SV=1
Length = 406
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 10/227 (4%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+R V+TG G++S +G+ + +L G SGI + F + + +A IK + +
Sbjct: 2 RRTVITGFGIISSIGNNKEEVLASLKAGKSGIEVVPEFVEMNMRSHVAGTIK-LNPSEHI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK---VFYD 281
K+ + M Y + ++A+ D G+TED ++ + G++IG+G G V D
Sbjct: 61 DRKVFRFMGDAAAYAYLSMREAIEDAGLTED---QVSNDRTGLVIGAGTGSAHNQLVACD 117
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
A+ R K + P+ V + SA LA G NYS+S+ACATS CI +A I
Sbjct: 118 AVRGPR-GVKAIGPYAVTKTMASSVSACLATPYKIRGVNYSMSSACATSAHCIGHAVELI 176
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWD 387
G+ +V+ GG++ F A A+S + N+ P KASR +D
Sbjct: 177 QLGKQDVVFAGGAEELSWECAT-EFDAMGAVSTKYNETPEKASRAYD 222
>sp|P06230|NODE_RHIME Nodulation protein E OS=Rhizobium meliloti (strain 1021) GN=nodE
PE=3 SV=1
Length = 402
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 5/222 (2%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TGMG + LG + + + EG S I + + + AE+K+ D
Sbjct: 2 DRRVVITGMGGLCGLGTDTTSIWKWMREGRSAIGPLLNTELHGLKGIVGAEVKALP-DHN 60
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+ K MD+ + + A +A+ G++ NE + + G +G GLGG A
Sbjct: 61 IDRKQLVSMDRISVLAVIAAHEAMRQAGLS---CNEGNALRFGATVGVGLGGWDATEKAY 117
Query: 284 EALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
L + + F A + + ++M LG GP + +++AC+++N I +A + I
Sbjct: 118 RTLLVDGGTRTEIFTGVKAMPSAAACQVSMSLGLRGPVFGVTSACSSANHAIASAVDQIK 177
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384
G A+VML GGSDA ++ I L + A RAL+ P A R
Sbjct: 178 CGRADVMLAGGSDAPLVWIVLKAWEAMRALAPDTCRPFSAGR 219
>sp|P57193|FABB_BUCAI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=fabB PE=3
SV=1
Length = 406
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 8/228 (3%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVV+TG+G+VS +G+ +L +GVSGI E + + IK S + +
Sbjct: 2 RRVVITGIGIVSSIGNNKKEVLASLYKGVSGIVSSEEMKKLGMRSAVWGNIKLESIN-II 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK-VFYDAI 283
KLS+ M+ Y A +A+ D I + + + G++ GSG K I
Sbjct: 61 TQKLSRFMNNASRYSFVAMMEAIKDAKIDREYYQK--NPRVGLISGSGCSFSKNTLTSDI 118
Query: 284 EALRISY--KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
++ + K ++P+ + SA L+ G YSIS+ACATS CI NA I
Sbjct: 119 HLMKNKHISKGISPYLAVKTMPSGISACLSTLFKIYGVTYSISSACATSAHCIGNAFELI 178
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ-RNNDPTKASRPWDI 388
G +++ GG + + + + F A RALS NNDP KASR +D+
Sbjct: 179 QFGRQDLIFAGGGEEISLELAM-QFDAMRALSTCFNNDPKKASRVYDV 225
>sp|Q89AY4|FABB_BUCBP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=fabB PE=3 SV=1
Length = 407
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KRVV+TG+G++S +G+ +LLE SGIS + + + + + IK + +
Sbjct: 2 KRVVITGLGIISSIGNNKIEVLTSLLETKSGISFSKEMERSGMRSHVWGNIKLDNYQENI 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K+ + M+ +Y + K+A+ D +T + + + GV+IGS G + + +
Sbjct: 62 DRKIFRFMNDASIYSYLSMKQAIEDAKLTSKMYQ--NNPRVGVIIGSSSGSPRCQINGVS 119
Query: 285 ALRIS--YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
++ + K ++P+ V + T+ SA L+ G NYSIS+ACATS CI NA I
Sbjct: 120 IIKKTKRLKSVSPYTVIKSMTSSISACLSTLFKIQGVNYSISSACATSAHCIGNAMELIQ 179
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALS-QRNNDPTKASRPWD 387
G+ +++ GG + + F + ALS N+ P +SR +D
Sbjct: 180 LGKQDLIFAGGGEELSWELAC-AFDSMGALSTMYNSQPILSSRVFD 224
>sp|P04684|NODE_RHILT Nodulation protein E OS=Rhizobium leguminosarum bv. trifolii
GN=nodE PE=3 SV=2
Length = 401
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TG+G + LG + + EG S IS I T D + EIK+
Sbjct: 2 DRRVVITGIGGLCGLGTNAASIWKEMREGPSAISPIITTDLYDLEGTVGLEIKAIPEHD- 60
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+ K MD+F L + A +A+ G++ D E + + G +G G G +
Sbjct: 61 IPRKQLVSMDRFSLLAVIAATEAMKQAGLSCD---EQNAHRFGAAMGLGGPGWDTIEETY 117
Query: 284 EALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
++ + + F P + + +++ LG GP + +++ACA N I +A + I
Sbjct: 118 RSILLDGVTRARIFTAPKGMPSAAAGHVSIFLGLRGPVFGVTSACAAGNHAIASAVDQIR 177
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384
G A+VML GGSDA + L + A R L+ P A R
Sbjct: 178 LGRADVMLAGGSDAPLTWGVLKSWEALRVLAPDTCRPFSADR 219
>sp|P41175|KAS1_STRCM Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cinnamonensis PE=3 SV=1
Length = 420
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 14/234 (5%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M Q+RV +TG+ +++P G F+ L EG + I FD F +K+AAE +
Sbjct: 1 MTQRRVAITGIEVLAPGGLGRKEFWQLLSEGRTATRGITFFDPAPFRSKVAAEADFCGLE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGG------ 275
++P+ +RMD+ + + +A+ D G + + GV++GS +G
Sbjct: 61 NGLSPQEVRRMDRAAQFAVVTA-RAVEDSGAE---LAAHPPHRIGVVVGSAVGATMGLDN 116
Query: 276 -MKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 334
+V D + ++ P + + +A +A +G GP+ +ST C TS
Sbjct: 117 EYRVVSDGGRLDLVDHRYAVPHLYNYLVPSSFAAEVAWAVGAEGPSTVVSTGC-TSGIDA 175
Query: 335 LNAANHIIR-GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+ A ++R G +VM+ G DA + PI A +A + R++ P ASRP+D
Sbjct: 176 VGIAVELVREGSVDVMVAGAVDAPISPIPC-VLDAIKATTPRHDAPATASRPFD 228
>sp|P06231|NOE4_RHIML Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1
Length = 401
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 12/225 (5%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TGMG + LG + + S I + + + AEIK+ D
Sbjct: 2 DRRVVITGMGGLCGLGTDTTSIWKWSARRRSAIGPVLNTELHGLKGIVGAEIKALP-DHN 60
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+ K MD+ + + A +A+ G++ NE + + G +G GLGG +DA
Sbjct: 61 IDRKQLVSMDRISVLAVIAAHEAMRQAGLS---CNEGNALRFGATVGVGLGG----WDAT 113
Query: 284 E-ALRISYK---KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 339
E A R S + F A + + ++M LG GP + +++AC+++N I +A +
Sbjct: 114 EKAYRPSLSTGGRTEIFTGVKAMPSAAACQVSMSLGLRGPVFGVTSACSSANHAIASAVD 173
Query: 340 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384
I G A+VML GGSDA ++ I L + A RAL+ P A R
Sbjct: 174 QIKCGRADVMLAGGSDAPLVWIVLKAWEAMRALAPDTCRPFSAGR 218
>sp|P04683|NODE_RHILV Nodulation protein E OS=Rhizobium leguminosarum bv. viciae GN=nodE
PE=3 SV=2
Length = 403
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+RVV+TG+G + LG + + + EG S I I + I EIK
Sbjct: 2 DRRVVITGLGGLCGLGTDASSIWTEMREGRSAIGPISNSEIHELKGMIGTEIKVLPQHD- 60
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
+ K MD+F L + A K+A+ G++ NE + + G +G G GG A
Sbjct: 61 IDRKQLISMDRFSLLAVLAAKQAMLQAGLS---CNEGNAHRFGATVGVGFGGWDATEKAY 117
Query: 284 EALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
L + + F A + + ++M+LG GP + ++ACA++N I +A + I
Sbjct: 118 RTLLLGGATRTELFTGVKAMPSAAACQVSMNLGLRGPVFGATSACASANHAIASAVDQIK 177
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384
G A+VML GGSDA ++ I L + A R L+ P A R
Sbjct: 178 LGRADVMLAGGSDAPLVWIVLKAWEAMRVLAPDTCRPFSADR 219
>sp|Q9CBS7|FAB1_MYCLE 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium leprae
(strain TN) GN=kasA PE=3 SV=1
Length = 416
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 182 PDV--FYNNLLEGVSGISEIETFDCTSF--PTKIAAEIKSFSTDGWVAPKLSKRMDKFML 237
PD+ + LL G SGI +E T + P KI +K V +S+ + M
Sbjct: 27 PDIESTWKGLLAGESGIHVLEDEYITKWDLPVKIGGHLKEP-----VDSHMSRLDLRRMS 81
Query: 238 YLLTAGKKALADGGITEDVMN-ELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-YKKMNP 295
Y+ K L G + E + E+D + V++G+GLGG + ++ + + +K++P
Sbjct: 82 YVQRMSK--LLSGRLWESTGSPEVDPDRFTVVVGTGLGGAERIVESYDLMNAGGPRKVSP 139
Query: 296 FCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSD 355
V N +A + + LG + +AC++ + I +A II G+A+V +CGG +
Sbjct: 140 LAVQMIMPNGAAATVGLQLGACAGVMTPVSACSSGSEAIAHAWRQIIMGDADVAVCGGVE 199
Query: 356 AAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+ + + F RA+S RN+DP ASRP+D
Sbjct: 200 GPIEALPIAAFSMMRAMSTRNDDPEGASRPFD 231
>sp|P63454|FAB1_MYCTU 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium
tuberculosis GN=kasA PE=1 SV=1
Length = 416
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 15/213 (7%)
Query: 182 PDV--FYNNLLEGVSGISEIETFDCTSF--PTKIAAEIKSFSTDGWVAPKLSKRMD-KFM 236
PD+ + LL G SGI +E T + KI +K D + R+D + M
Sbjct: 27 PDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMG-----RLDMRRM 80
Query: 237 LYLLTAGKKALADGGITEDVMN-ELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-YKKMN 294
Y+ GK L G + E + E+D + V++G+GLGG + ++ + + +K++
Sbjct: 81 SYVQRMGK--LLGGQLWESAGSPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVS 138
Query: 295 PFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGS 354
P V N +A++ + LG + +AC++ + I +A I+ G+A+V +CGG
Sbjct: 139 PLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGV 198
Query: 355 DAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+ + + + F RA+S RN++P +ASRP+D
Sbjct: 199 EGPIEALPIAAFSMMRAMSTRNDEPERASRPFD 231
>sp|P63455|FAB1_MYCBO 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=kasA PE=3 SV=1
Length = 416
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 15/213 (7%)
Query: 182 PDV--FYNNLLEGVSGISEIETFDCTSF--PTKIAAEIKSFSTDGWVAPKLSKRMD-KFM 236
PD+ + LL G SGI +E T + KI +K D + R+D + M
Sbjct: 27 PDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMG-----RLDMRRM 80
Query: 237 LYLLTAGKKALADGGITEDVMN-ELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-YKKMN 294
Y+ GK L G + E + E+D + V++G+GLGG + ++ + + +K++
Sbjct: 81 SYVQRMGK--LLGGQLWESAGSPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVS 138
Query: 295 PFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGS 354
P V N +A++ + LG + +AC++ + I +A I+ G+A+V +CGG
Sbjct: 139 PLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGV 198
Query: 355 DAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+ + + + F RA+S RN++P +ASRP+D
Sbjct: 199 EGPIEALPIAAFSMMRAMSTRNDEPERASRPFD 231
>sp|Q8KA28|FABB_BUCAP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=fabB PE=3 SV=1
Length = 407
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 8/228 (3%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KRVV+TG G++S +G+ N+L G+SGI+ E + +++ IK + +
Sbjct: 2 KRVVITGFGIISSIGNNKKEVLNSLYNGISGITFSEEMKESGMRSQVWGNIKLENKKFFK 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K+S+ M+ +Y + ++A+ D + + + G G K I+
Sbjct: 62 KNKISRFMNNGSIYAFLSMEQAIKDANLQTKQYQKNPRIGIIAGSGGGFP--KYHIQGID 119
Query: 285 ALRISYKKMN---PFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
A+R S + +N P+ A + SA L+ G NYSIS+ACATS CI NA I
Sbjct: 120 AIR-SNRGLNSVSPYIAIKAMNSGISACLSTLFKIYGVNYSISSACATSGHCIGNAFELI 178
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDI 388
G+ +++ GG + + F A +ALS N +PTK+SR +D+
Sbjct: 179 KFGKQDLIFAGGGEEVSWELAY-EFDAMKALSSNFNKNPTKSSRVYDV 225
>sp|P16539|KAS2_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 2
OS=Streptomyces glaucescens GN=tcmL PE=3 SV=2
Length = 409
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 15/227 (6%)
Query: 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAP 226
VVVTG+G+V+P G + ++ L G SGI I+ FD +P ++ E+ +F +
Sbjct: 7 VVVTGLGIVAPNGTGTEEYWAATLAGKSGIDVIQRFDPHGYPVRVGGEVLAFDAAAHLPG 66
Query: 227 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL 286
+L + D+ + L A + ALAD G+ + + D+ GVL +G GG + ++ L
Sbjct: 67 RLLPQTDRMTQHALVAAEWALADAGLEPE---KQDEYGLGVLTAAGAGGFEFGQREMQKL 123
Query: 287 ------RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
R+S + + F N G +++ G G + T A +AA
Sbjct: 124 WGTGPERVSAYQSFAW---FYAVNTGQ--ISIRHGMRGHSSVFVTEQAGGLDAAAHAARL 178
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
+ +G N L GG +A++ P GL + LS+ DP A P+D
Sbjct: 179 LRKGTLNTALTGGCEASLCPWGLVAQIPSGFLSE-ATDPHDAYLPFD 224
>sp|P63456|FAB2_MYCTU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium
tuberculosis GN=kasB PE=1 SV=1
Length = 417
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 107/245 (43%), Gaps = 25/245 (10%)
Query: 152 EEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISE-----IETFDCTS 206
E VT K P+ VVVTG+ + + L + + + LL+ SGI +E FD
Sbjct: 3 ELVTGKAFPY-----VVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFD--- 54
Query: 207 FPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCG 266
P +I + D + +RM ++ + G E+D ++
Sbjct: 55 LPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMSTVLSRRLWENAG-----SPEVDTNRLM 108
Query: 267 VLIGSGLGGMK--VF-YDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323
V IG+GLG + VF YD + A K ++P V N +A + ++ +
Sbjct: 109 VSIGTGLGSAEELVFSYDDMRAR--GMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTP 166
Query: 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACR-ALSQRNNDPTKA 382
+ACA+ I A I+ GEA+ +CGG + + + + GF R +S N+DP A
Sbjct: 167 VSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGA 226
Query: 383 SRPWD 387
RP+D
Sbjct: 227 CRPFD 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,866,884
Number of Sequences: 539616
Number of extensions: 5646365
Number of successful extensions: 14012
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 13688
Number of HSP's gapped (non-prelim): 256
length of query: 392
length of database: 191,569,459
effective HSP length: 119
effective length of query: 273
effective length of database: 127,355,155
effective search space: 34767957315
effective search space used: 34767957315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)