Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>016289
MTDNLFEGLPPPSSEPQNEEQQQSTANNKKREASPAPAPAPALKSALKKPKTDSEETMPQ
KSLRFKMTTDASDAQVIDAMQKIASHIKNPAKFGKASKLAIQMIQAGSVKPGTSGQFFAI
LEAAMSSPTSCTDPSVRADYHALFTVAQDAAECLSKKQKNQLSIWTFQAVVANDLFTDDS
FVFSKTATRIKEAISSLPVATKDDDLEEAAALKDEAEKTNEDSKNKRDMPPAVQAEENHK
DEADPFGLDAFIPKRIRKDDRTKGKKETGAKIKEDEEEYKRFLKSQREALITGLEIAAHR
YKTPWCQTVIDILVKHAFDNVARFTSQQRDAIAKLWASIREQQNRRKQGKSVTGKLDVNA
FELLQQKYANEKISIRRAVGSGGERRAQQWLG

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  016289
        (392 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2084928 - symbol:AT3G04560 "AT3G04560" species...  1123  7.3e-114  1


>TAIR|locus:2084928 [details] [associations]
            symbol:AT3G04560 "AT3G04560" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC011437
            EMBL:AY045801 EMBL:AY091439 IPI:IPI00518384 RefSeq:NP_566231.1
            UniGene:At.48619 UniGene:At.71013 PaxDb:Q9SR18 PRIDE:Q9SR18
            EnsemblPlants:AT3G04560.1 GeneID:819612 KEGG:ath:AT3G04560
            TAIR:At3g04560 eggNOG:NOG321823 HOGENOM:HOG000239621
            InParanoid:Q9SR18 OMA:HFFAILE PhylomeDB:Q9SR18
            ProtClustDB:CLSN2688060 ArrayExpress:Q9SR18 Genevestigator:Q9SR18
            Uniprot:Q9SR18
        Length = 417

 Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
 Identities = 228/338 (67%), Positives = 260/338 (76%)

Query:    55 EETMPQKSLRFKMTTDASDAQVIDAMQKIASHIKNPAKFGKASKLAIQMIQAGSVKPGTS 114
             E   P+K L+FK +TDAS+ QVI+AMQKI SHIKNP+KF KASKLAI++IQAGSVKP TS
Sbjct:    83 EPEAPKKRLQFKTSTDASEEQVIEAMQKITSHIKNPSKFSKASKLAIRLIQAGSVKPETS 142

Query:   115 GQFFAILEAAMSSPTSCTDPSVRADYHALFTVAQDAAECLSKKQKNQLSIWTFQAVVAND 174
               F AILEAAMSS T CTD SVRADYHALF+ AQD AECL K QKN L+IWTF+AVVAND
Sbjct:   143 SYFIAILEAAMSSKTPCTDRSVRADYHALFSAAQDVAECLDKSQKNLLTIWTFKAVVAND 202

Query:   175 LFTDDSFVFSKTATRIKEAISSLPVATXXXXXXXXXXXXXXXXXTNEDSKNKRDMPPAVQ 234
             LFTDDSF+FSKTATRIKEAIS LPV+T                  N D +  +D+  A  
Sbjct:   203 LFTDDSFMFSKTATRIKEAISDLPVSTEEDDVEEAAALEEAAVKDNGDGQTTQDVAEAAS 262

Query:   235 AEENHKDEADPFGLDAFIPKRIRKDDRTKGKKETGAKIKEDEEEYKRFLKSQREALITGL 294
             A +N   E+DPFGLDA+IP   +K+ +TK K+        D EE KRFL+S+REALIT L
Sbjct:   263 AGDNEAVESDPFGLDAWIPSSGKKNGKTKIKRTNE---DPDAEENKRFLRSKREALITCL 319

Query:   295 EIAAHRYKTPWCQTVIDILVKHAFDNVARFTSQQRDAIAKLWASIREQQNRRKQGKSVTG 354
             EIAA RYK PWCQTVIDILVKHAF+NV+RFTSQQR A+ KLWAS+REQ  RRKQGKSVTG
Sbjct:   320 EIAARRYKVPWCQTVIDILVKHAFENVSRFTSQQRQAVEKLWASVREQHLRRKQGKSVTG 379

Query:   355 KLDVNAFELLQQKYANEKISIRRAVGSGGERRAQQWLG 392
             KLDV AFE LQ KYANEK+SIR +VG+ GERRAQQWLG
Sbjct:   380 KLDVTAFESLQDKYANEKMSIRSSVGASGERRAQQWLG 417


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.127   0.356    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      392       341   0.00095  116 3  11 23  0.43    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  211 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.46u 0.13s 28.59t   Elapsed:  00:00:02
  Total cpu time:  28.46u 0.13s 28.59t   Elapsed:  00:00:02
  Start:  Fri May 10 22:31:28 2013   End:  Fri May 10 22:31:30 2013

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