Query 016293
Match_columns 392
No_of_seqs 210 out of 2027
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 05:32:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016293.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016293hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2882 p-Nitrophenyl phosphat 100.0 4.7E-41 1E-45 308.3 23.9 287 74-388 13-303 (306)
2 PLN02645 phosphoglycolate phos 100.0 1.8E-39 3.8E-44 312.8 28.8 296 71-392 16-311 (311)
3 COG0647 NagD Predicted sugar p 100.0 2E-38 4.3E-43 294.4 23.8 265 78-391 3-268 (269)
4 TIGR01452 PGP_euk phosphoglyco 100.0 2.6E-36 5.6E-41 286.8 26.0 275 82-384 1-279 (279)
5 PRK10444 UMP phosphatase; Prov 100.0 4.8E-36 1E-40 279.2 25.8 245 83-384 1-245 (248)
6 TIGR01457 HAD-SF-IIA-hyp2 HAD- 100.0 1.1E-35 2.4E-40 277.7 26.0 249 83-384 1-249 (249)
7 TIGR01458 HAD-SF-IIA-hyp3 HAD- 100.0 3.3E-33 7.1E-38 262.1 26.2 250 83-389 1-255 (257)
8 TIGR01456 CECR5 HAD-superfamil 100.0 1.1E-30 2.4E-35 252.6 21.8 271 85-388 2-320 (321)
9 TIGR01460 HAD-SF-IIA Haloacid 100.0 9.2E-30 2E-34 236.0 21.3 232 86-358 1-236 (236)
10 KOG3040 Predicted sugar phosph 100.0 1.5E-29 3.2E-34 219.3 19.9 253 81-390 5-258 (262)
11 TIGR01459 HAD-SF-IIA-hyp4 HAD- 100.0 5.4E-27 1.2E-31 218.4 21.3 232 78-357 3-242 (242)
12 PRK10530 pyridoxal phosphate ( 99.8 1.1E-19 2.3E-24 171.9 15.6 249 82-382 2-259 (272)
13 PRK10513 sugar phosphate phosp 99.8 6.9E-19 1.5E-23 166.3 14.9 239 82-381 2-255 (270)
14 COG0546 Gph Predicted phosphat 99.8 1.7E-18 3.6E-23 159.0 13.3 129 253-390 91-219 (220)
15 PRK10976 putative hydrolase; P 99.8 9.9E-18 2.2E-22 158.1 18.0 71 83-164 2-73 (266)
16 TIGR01422 phosphonatase phosph 99.8 5.3E-18 1.2E-22 158.8 15.8 127 253-388 101-252 (253)
17 PRK13288 pyrophosphatase PpaX; 99.8 2.3E-18 4.9E-23 157.2 13.0 128 253-389 84-211 (214)
18 PRK13478 phosphonoacetaldehyde 99.8 9.4E-18 2E-22 158.5 16.3 129 253-390 103-256 (267)
19 PRK06769 hypothetical protein; 99.8 1.4E-17 3E-22 147.2 15.6 78 310-388 92-171 (173)
20 PRK15126 thiamin pyrimidine py 99.8 2.6E-18 5.5E-23 162.7 11.6 73 82-165 1-74 (272)
21 PRK01158 phosphoglycolate phos 99.8 1.4E-17 3.1E-22 153.5 16.3 72 82-164 2-74 (230)
22 PRK13226 phosphoglycolate phos 99.8 1.7E-17 3.6E-22 153.2 16.6 128 253-389 97-225 (229)
23 PLN02770 haloacid dehalogenase 99.8 7.7E-18 1.7E-22 157.4 14.1 121 253-383 110-230 (248)
24 TIGR03351 PhnX-like phosphonat 99.8 1.5E-17 3.3E-22 152.3 15.0 127 253-388 89-219 (220)
25 COG0561 Cof Predicted hydrolas 99.7 3.9E-17 8.5E-22 153.9 17.0 72 82-164 2-74 (264)
26 TIGR02253 CTE7 HAD superfamily 99.7 4.7E-18 1E-22 155.6 10.3 126 253-385 96-221 (221)
27 TIGR01454 AHBA_synth_RP 3-amin 99.7 1.3E-17 2.8E-22 151.2 12.4 128 253-389 77-204 (205)
28 PLN03243 haloacid dehalogenase 99.7 4.2E-17 9.1E-22 153.1 14.9 124 253-388 111-234 (260)
29 PRK08942 D,D-heptose 1,7-bisph 99.7 1.8E-16 3.9E-21 141.0 18.1 76 309-390 101-178 (181)
30 PF13344 Hydrolase_6: Haloacid 99.7 2.7E-17 6E-22 131.9 11.1 100 86-213 1-100 (101)
31 TIGR01449 PGP_bact 2-phosphogl 99.7 3.2E-17 7E-22 149.2 13.1 127 253-388 87-213 (213)
32 PRK03669 mannosyl-3-phosphogly 99.7 1.2E-16 2.6E-21 151.3 17.4 74 81-164 5-79 (271)
33 TIGR00213 GmhB_yaeD D,D-heptos 99.7 1E-16 2.2E-21 142.0 15.7 71 309-385 104-175 (176)
34 PRK10748 flavin mononucleotide 99.7 2.3E-17 5E-22 153.2 11.7 124 253-388 115-238 (238)
35 PLN02887 hydrolase family prot 99.7 4.3E-17 9.4E-22 167.5 14.4 82 76-163 301-387 (580)
36 PRK13223 phosphoglycolate phos 99.7 4.6E-17 9.9E-22 154.1 12.8 128 253-389 103-230 (272)
37 PRK10826 2-deoxyglucose-6-phos 99.7 5E-17 1.1E-21 149.2 11.7 124 253-386 94-217 (222)
38 PLN02779 haloacid dehalogenase 99.7 2.6E-16 5.6E-21 150.0 16.2 125 253-386 146-270 (286)
39 PRK13222 phosphoglycolate phos 99.7 4.9E-16 1.1E-20 142.6 17.1 130 253-391 95-224 (226)
40 PRK11587 putative phosphatase; 99.7 1.4E-16 3.1E-21 145.8 13.4 120 253-385 85-204 (218)
41 PRK13225 phosphoglycolate phos 99.7 6.5E-17 1.4E-21 152.9 11.3 127 253-391 144-270 (273)
42 PLN02575 haloacid dehalogenase 99.7 3.8E-16 8.2E-21 152.4 16.8 121 253-385 218-338 (381)
43 TIGR01482 SPP-subfamily Sucros 99.7 7.3E-17 1.6E-21 148.1 10.8 68 86-164 1-69 (225)
44 TIGR00099 Cof-subfamily Cof su 99.7 1.2E-15 2.7E-20 143.0 18.6 69 85-164 1-70 (256)
45 TIGR02254 YjjG/YfnB HAD superf 99.7 5.6E-16 1.2E-20 141.9 15.2 125 253-388 99-224 (224)
46 COG0637 Predicted phosphatase/ 99.7 1E-16 2.2E-21 147.2 10.0 131 253-390 88-218 (221)
47 TIGR02463 MPGP_rel mannosyl-3- 99.7 5.3E-16 1.2E-20 142.3 14.5 71 85-165 1-72 (221)
48 TIGR01487 SPP-like sucrose-pho 99.7 5.3E-16 1.1E-20 141.8 13.8 71 83-164 1-72 (215)
49 PLN02940 riboflavin kinase 99.7 2.6E-16 5.7E-21 155.6 12.4 124 253-386 95-218 (382)
50 PRK09449 dUMP phosphatase; Pro 99.7 1.8E-15 3.9E-20 139.0 15.9 126 253-389 97-223 (224)
51 PRK10563 6-phosphogluconate ph 99.7 1.4E-16 3.1E-21 146.0 7.2 122 254-389 91-213 (221)
52 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 3.1E-15 6.7E-20 126.0 14.3 46 310-356 84-131 (132)
53 PF08282 Hydrolase_3: haloacid 99.6 2.7E-15 5.8E-20 138.9 14.6 235 86-383 1-247 (254)
54 TIGR01486 HAD-SF-IIB-MPGP mann 99.6 4.3E-15 9.3E-20 139.5 15.9 70 85-165 1-71 (256)
55 TIGR01656 Histidinol-ppas hist 99.6 3.4E-15 7.3E-20 128.4 13.9 48 310-358 100-147 (147)
56 PRK00192 mannosyl-3-phosphogly 99.6 2.6E-15 5.7E-20 142.3 13.9 71 82-163 3-74 (273)
57 COG1011 Predicted hydrolase (H 99.6 6.2E-15 1.3E-19 135.5 15.7 128 253-390 101-228 (229)
58 PLN02919 haloacid dehalogenase 99.6 9.3E-16 2E-20 168.7 11.2 122 253-384 163-285 (1057)
59 PRK14988 GMP/IMP nucleotidase; 99.6 4E-15 8.6E-20 136.9 13.0 105 253-362 95-200 (224)
60 PRK06698 bifunctional 5'-methy 99.6 5E-15 1.1E-19 150.4 14.1 124 253-390 332-455 (459)
61 TIGR01261 hisB_Nterm histidino 99.6 9.2E-15 2E-19 127.4 13.7 56 309-365 101-156 (161)
62 PF13242 Hydrolase_like: HAD-h 99.6 1.7E-15 3.6E-20 114.9 7.6 74 309-384 2-75 (75)
63 KOG1618 Predicted phosphatase 99.6 2.4E-14 5.1E-19 132.4 15.1 249 84-362 36-346 (389)
64 PRK10725 fructose-1-P/6-phosph 99.6 2.5E-15 5.5E-20 134.0 8.5 93 258-356 94-186 (188)
65 TIGR02252 DREG-2 REG-2-like, H 99.6 5E-15 1.1E-19 133.9 9.2 97 253-354 107-203 (203)
66 TIGR02461 osmo_MPG_phos mannos 99.6 2.5E-14 5.3E-19 131.7 13.0 70 85-165 1-70 (225)
67 PHA02597 30.2 hypothetical pro 99.6 3.4E-14 7.4E-19 127.9 13.4 117 253-385 76-195 (197)
68 TIGR01428 HAD_type_II 2-haloal 99.6 1E-14 2.2E-19 131.4 9.2 101 253-358 94-194 (198)
69 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 3.7E-14 7.9E-19 124.3 12.3 45 310-354 107-160 (166)
70 TIGR02247 HAD-1A3-hyp Epoxide 99.6 5.1E-14 1.1E-18 128.2 13.2 108 253-364 96-204 (211)
71 TIGR01485 SPP_plant-cyano sucr 99.6 1.6E-13 3.4E-18 128.4 16.8 205 85-358 3-212 (249)
72 PRK09456 ?-D-glucose-1-phospha 99.6 9.2E-14 2E-18 125.4 14.5 110 253-366 86-195 (199)
73 TIGR01990 bPGM beta-phosphoglu 99.5 6.7E-15 1.5E-19 130.8 6.9 97 253-356 89-185 (185)
74 TIGR01668 YqeG_hyp_ppase HAD s 99.5 9.3E-14 2E-18 122.3 13.2 56 310-365 90-145 (170)
75 PRK10187 trehalose-6-phosphate 99.5 1E-12 2.2E-17 124.0 21.0 70 309-391 171-243 (266)
76 TIGR02009 PGMB-YQAB-SF beta-ph 99.5 1.4E-14 3E-19 128.8 7.8 96 253-355 90-185 (185)
77 COG2179 Predicted hydrolase of 99.5 4.2E-14 9.1E-19 119.9 10.2 48 310-357 92-139 (175)
78 TIGR02471 sucr_syn_bact_C sucr 99.5 5E-13 1.1E-17 123.9 17.3 70 85-164 1-70 (236)
79 PTZ00174 phosphomannomutase; P 99.5 3.9E-13 8.5E-18 125.5 14.3 74 81-163 3-77 (247)
80 KOG3085 Predicted hydrolase (H 99.5 1.2E-13 2.5E-18 125.9 10.3 103 254-361 116-218 (237)
81 PRK12702 mannosyl-3-phosphogly 99.5 7.4E-13 1.6E-17 123.8 14.2 71 83-164 1-72 (302)
82 PLN02811 hydrolase 99.5 1.5E-13 3.2E-18 126.1 9.1 125 253-385 80-207 (220)
83 cd01427 HAD_like Haloacid deha 99.5 6.1E-13 1.3E-17 110.8 12.0 48 307-355 92-139 (139)
84 PRK14502 bifunctional mannosyl 99.5 1.3E-12 2.9E-17 134.4 16.1 74 81-165 414-488 (694)
85 PRK09484 3-deoxy-D-manno-octul 99.5 6.6E-13 1.4E-17 118.3 11.9 69 311-389 95-169 (183)
86 TIGR01993 Pyr-5-nucltdase pyri 99.4 3.8E-13 8.3E-18 119.8 9.4 98 253-355 86-184 (184)
87 KOG2914 Predicted haloacid-hal 99.4 3.1E-13 6.8E-18 122.6 7.6 71 307-384 147-218 (222)
88 TIGR01670 YrbI-phosphatas 3-de 99.4 1.8E-12 4E-17 112.2 11.9 62 311-382 75-136 (154)
89 TIGR00338 serB phosphoserine p 99.4 2.7E-12 5.9E-17 117.4 13.3 67 310-387 150-218 (219)
90 COG0241 HisB Histidinol phosph 99.4 8.4E-12 1.8E-16 109.4 15.1 75 309-389 103-177 (181)
91 TIGR01484 HAD-SF-IIB HAD-super 99.4 1.4E-11 3E-16 111.5 17.0 66 85-163 1-68 (204)
92 PLN02954 phosphoserine phospha 99.4 1.3E-11 2.7E-16 113.4 16.1 72 309-388 152-223 (224)
93 TIGR01685 MDP-1 magnesium-depe 99.4 2.9E-12 6.3E-17 112.6 11.0 52 310-362 110-163 (174)
94 TIGR01509 HAD-SF-IA-v3 haloaci 99.4 4E-12 8.6E-17 112.5 11.9 97 253-355 87-183 (183)
95 PRK05446 imidazole glycerol-ph 99.4 1.2E-11 2.7E-16 120.1 15.8 55 309-364 102-156 (354)
96 PF13419 HAD_2: Haloacid dehal 99.4 2.3E-12 5E-17 112.4 9.8 98 253-355 79-176 (176)
97 TIGR02726 phenyl_P_delta pheny 99.4 6.7E-12 1.5E-16 110.0 11.7 68 311-388 81-154 (169)
98 PLN02382 probable sucrose-phos 99.3 6.5E-11 1.4E-15 118.2 18.3 205 84-358 10-223 (413)
99 PHA02530 pseT polynucleotide k 99.3 2E-11 4.4E-16 117.1 11.7 49 310-359 250-299 (300)
100 PRK11133 serB phosphoserine ph 99.3 1.6E-10 3.5E-15 111.6 15.7 70 309-389 245-316 (322)
101 PF09419 PGP_phosphatase: Mito 99.2 6.4E-11 1.4E-15 102.9 11.3 48 81-128 39-90 (168)
102 TIGR00685 T6PP trehalose-phosp 99.2 6.6E-10 1.4E-14 103.6 18.8 71 310-391 165-242 (244)
103 TIGR01548 HAD-SF-IA-hyp1 haloa 99.2 7.6E-11 1.6E-15 106.2 11.2 86 257-348 112-197 (197)
104 PLN02423 phosphomannomutase 99.2 5.5E-11 1.2E-15 110.9 10.2 71 82-163 5-78 (245)
105 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.2 1.7E-10 3.8E-15 103.6 12.4 47 311-358 146-192 (201)
106 TIGR01549 HAD-SF-IA-v1 haloaci 99.2 7.7E-11 1.7E-15 101.6 8.7 87 255-349 68-154 (154)
107 TIGR01691 enolase-ppase 2,3-di 99.2 3.2E-10 6.9E-15 103.7 12.8 101 253-359 97-199 (220)
108 TIGR01672 AphA HAD superfamily 99.2 3.4E-10 7.5E-15 104.4 13.1 45 310-362 173-217 (237)
109 PRK14501 putative bifunctional 99.1 2.3E-09 4.9E-14 115.0 16.2 70 309-391 654-723 (726)
110 PRK11009 aphA acid phosphatase 99.1 2.3E-09 4.9E-14 98.9 13.6 37 320-361 180-216 (237)
111 TIGR01493 HAD-SF-IA-v2 Haloaci 99.1 2.1E-10 4.5E-15 101.0 6.3 74 270-348 102-175 (175)
112 TIGR01663 PNK-3'Pase polynucle 99.1 1.1E-09 2.4E-14 111.7 12.0 47 81-127 166-225 (526)
113 TIGR01681 HAD-SF-IIIC HAD-supe 99.0 5.7E-10 1.2E-14 93.5 7.4 103 84-209 1-125 (128)
114 PRK13582 thrH phosphoserine ph 99.0 1.6E-09 3.5E-14 97.9 10.4 126 254-391 71-198 (205)
115 KOG3109 Haloacid dehalogenase- 99.0 1E-09 2.2E-14 97.2 7.8 88 270-359 117-208 (244)
116 PF05116 S6PP: Sucrose-6F-phos 99.0 2.7E-09 5.8E-14 99.6 11.2 202 84-358 3-209 (247)
117 PF08645 PNK3P: Polynucleotide 99.0 3.2E-09 6.8E-14 92.3 9.3 44 309-352 95-152 (159)
118 PRK09552 mtnX 2-hydroxy-3-keto 99.0 3.5E-09 7.6E-14 97.0 9.8 65 318-390 150-214 (219)
119 PLN02205 alpha,alpha-trehalose 98.9 7.1E-09 1.5E-13 111.8 12.3 55 82-139 595-654 (854)
120 PTZ00445 p36-lilke protein; Pr 98.9 7.1E-09 1.5E-13 92.3 9.4 49 309-358 155-207 (219)
121 PLN03017 trehalose-phosphatase 98.9 3.1E-07 6.7E-12 89.4 20.4 71 310-391 281-358 (366)
122 TIGR01686 FkbH FkbH-like domai 98.9 1.2E-08 2.6E-13 98.9 10.0 41 310-351 85-125 (320)
123 PLN02580 trehalose-phosphatase 98.8 5.9E-07 1.3E-11 88.1 21.5 70 310-391 299-376 (384)
124 TIGR01684 viral_ppase viral ph 98.8 9E-09 1.9E-13 96.4 8.0 79 80-166 123-205 (301)
125 COG1778 Low specificity phosph 98.8 1.2E-08 2.7E-13 85.9 7.3 110 78-216 3-123 (170)
126 PF00702 Hydrolase: haloacid d 98.8 2E-09 4.3E-14 97.5 2.7 88 252-349 128-215 (215)
127 smart00775 LNS2 LNS2 domain. T 98.8 6.1E-08 1.3E-12 84.1 11.5 122 85-215 1-142 (157)
128 TIGR01489 DKMTPPase-SF 2,3-dik 98.8 5.4E-08 1.2E-12 86.3 10.9 38 309-350 146-183 (188)
129 TIGR03333 salvage_mtnX 2-hydro 98.7 7.1E-08 1.5E-12 88.1 9.7 64 319-390 147-210 (214)
130 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.6 1.4E-07 3E-12 85.0 9.3 45 309-354 152-196 (202)
131 TIGR02137 HSK-PSP phosphoserin 98.6 5E-07 1.1E-11 81.8 12.5 69 310-391 129-198 (203)
132 COG0560 SerB Phosphoserine pho 98.6 3.4E-07 7.3E-12 83.4 10.6 44 310-354 142-185 (212)
133 PLN02151 trehalose-phosphatase 98.6 8.3E-06 1.8E-10 79.2 20.3 71 310-391 267-344 (354)
134 PHA03398 viral phosphatase sup 98.5 3.6E-07 7.8E-12 85.8 7.0 74 81-163 126-203 (303)
135 TIGR01488 HAD-SF-IB Haloacid D 98.4 8.2E-07 1.8E-11 78.0 8.7 39 309-348 139-177 (177)
136 smart00577 CPDc catalytic doma 98.4 1.2E-06 2.6E-11 75.2 8.9 110 83-215 2-138 (148)
137 PLN02770 haloacid dehalogenase 98.4 2.1E-06 4.6E-11 80.1 10.0 99 99-217 108-206 (248)
138 TIGR01689 EcbF-BcbF capsule bi 98.3 7.7E-07 1.7E-11 73.9 5.6 60 83-142 1-79 (126)
139 COG3769 Predicted hydrolase (H 98.3 8.4E-06 1.8E-10 72.6 11.5 74 81-164 5-78 (274)
140 PLN03243 haloacid dehalogenase 98.2 5.8E-06 1.2E-10 77.8 9.5 98 100-217 110-207 (260)
141 COG0546 Gph Predicted phosphat 98.2 7.1E-06 1.5E-10 75.2 9.7 97 100-216 90-186 (220)
142 PRK13288 pyrophosphatase PpaX; 98.2 9.2E-06 2E-10 73.9 10.0 99 99-217 82-180 (214)
143 PLN02575 haloacid dehalogenase 98.2 9.1E-06 2E-10 79.9 9.8 99 100-218 217-315 (381)
144 TIGR01454 AHBA_synth_RP 3-amin 98.2 1.2E-05 2.5E-10 72.7 9.9 100 97-216 73-172 (205)
145 TIGR01449 PGP_bact 2-phosphogl 98.2 1.3E-05 2.7E-10 72.7 9.8 100 98-217 84-183 (213)
146 TIGR01428 HAD_type_II 2-haloal 98.1 1.5E-05 3.2E-10 71.6 10.1 99 98-216 91-189 (198)
147 PRK14988 GMP/IMP nucleotidase; 98.1 1E-05 2.2E-10 74.5 8.9 96 100-215 94-189 (224)
148 TIGR02253 CTE7 HAD superfamily 98.1 1.3E-05 2.8E-10 73.1 9.4 100 98-217 93-193 (221)
149 TIGR01422 phosphonatase phosph 98.1 1.3E-05 2.9E-10 74.9 9.0 101 97-217 97-199 (253)
150 TIGR01525 ATPase-IB_hvy heavy 98.1 3.1E-05 6.8E-10 80.8 12.6 57 82-141 363-424 (556)
151 PRK13226 phosphoglycolate phos 98.1 2.2E-05 4.8E-10 72.4 10.1 99 99-217 95-193 (229)
152 PRK10826 2-deoxyglucose-6-phos 98.1 1.7E-05 3.7E-10 72.6 9.2 99 99-217 92-190 (222)
153 TIGR02252 DREG-2 REG-2-like, H 98.1 1.7E-05 3.6E-10 71.5 9.0 96 99-215 105-201 (203)
154 COG4087 Soluble P-type ATPase 98.1 2.5E-05 5.5E-10 64.0 8.8 64 320-390 85-148 (152)
155 TIGR02009 PGMB-YQAB-SF beta-ph 98.1 1.8E-05 3.8E-10 70.0 8.7 97 98-216 87-183 (185)
156 PF13419 HAD_2: Haloacid dehal 98.1 2.9E-05 6.2E-10 67.2 9.7 98 99-216 77-174 (176)
157 TIGR03351 PhnX-like phosphonat 98.0 2.2E-05 4.8E-10 71.6 9.2 97 99-215 87-186 (220)
158 TIGR01533 lipo_e_P4 5'-nucleot 98.0 2.2E-05 4.7E-10 73.8 9.1 64 81-144 73-163 (266)
159 TIGR01511 ATPase-IB1_Cu copper 98.0 6E-05 1.3E-09 78.7 12.9 42 82-123 384-429 (562)
160 COG0637 Predicted phosphatase/ 98.0 2.3E-05 5E-10 71.9 8.4 102 97-218 84-185 (221)
161 PRK11587 putative phosphatase; 98.0 5.1E-05 1.1E-09 69.3 10.3 98 99-217 83-180 (218)
162 TIGR01509 HAD-SF-IA-v3 haloaci 98.0 5E-05 1.1E-09 66.8 9.9 98 98-216 84-181 (183)
163 PF02358 Trehalose_PPase: Treh 98.0 9.9E-05 2.1E-09 68.3 11.8 49 310-359 163-219 (235)
164 COG1877 OtsB Trehalose-6-phosp 97.9 0.00091 2E-08 62.7 18.1 73 81-166 16-95 (266)
165 PRK13478 phosphonoacetaldehyde 97.9 5.3E-05 1.1E-09 71.5 10.0 101 98-217 100-201 (267)
166 TIGR01512 ATPase-IB2_Cd heavy 97.9 0.0001 2.2E-09 76.6 12.8 60 321-389 418-479 (536)
167 PF12689 Acid_PPase: Acid Phos 97.9 6.6E-05 1.4E-09 65.6 9.5 110 83-216 3-148 (169)
168 TIGR01990 bPGM beta-phosphoglu 97.9 3.4E-05 7.4E-10 68.2 7.9 97 98-216 86-182 (185)
169 TIGR02244 HAD-IG-Ncltidse HAD 97.9 0.00014 3.1E-09 70.6 12.5 42 317-358 283-325 (343)
170 KOG1615 Phosphoserine phosphat 97.9 9.4E-05 2E-09 64.8 9.5 31 314-347 161-191 (227)
171 TIGR02247 HAD-1A3-hyp Epoxide 97.9 4.8E-05 1E-09 69.0 7.9 101 98-216 93-193 (211)
172 PLN02811 hydrolase 97.9 8.5E-05 1.8E-09 68.0 9.4 101 97-217 76-182 (220)
173 PRK13223 phosphoglycolate phos 97.9 9.3E-05 2E-09 70.1 9.9 98 100-217 102-199 (272)
174 PLN02940 riboflavin kinase 97.8 7.4E-05 1.6E-09 74.3 9.5 99 100-218 94-193 (382)
175 PRK08238 hypothetical protein; 97.8 8.1E-05 1.8E-09 75.9 9.8 93 101-219 74-166 (479)
176 smart00577 CPDc catalytic doma 97.8 1.6E-05 3.4E-10 68.3 3.1 89 253-350 47-136 (148)
177 PRK13222 phosphoglycolate phos 97.8 0.00019 4E-09 65.6 10.2 99 99-217 93-191 (226)
178 TIGR01548 HAD-SF-IA-hyp1 haloa 97.8 0.00018 3.8E-09 64.6 9.7 90 100-210 107-196 (197)
179 COG4229 Predicted enolase-phos 97.7 0.00034 7.4E-09 60.7 10.5 98 253-357 105-205 (229)
180 PRK09449 dUMP phosphatase; Pro 97.7 0.0002 4.4E-09 65.4 9.8 98 98-216 94-193 (224)
181 TIGR01681 HAD-SF-IIIC HAD-supe 97.7 7.9E-05 1.7E-09 62.3 6.4 90 252-347 30-126 (128)
182 PLN03063 alpha,alpha-trehalose 97.7 0.0028 6.1E-08 68.8 19.9 56 83-141 507-572 (797)
183 PRK10725 fructose-1-P/6-phosph 97.7 0.00014 3E-09 64.5 8.4 97 99-217 88-184 (188)
184 TIGR02254 YjjG/YfnB HAD superf 97.7 0.00021 4.5E-09 65.1 9.6 99 98-217 96-196 (224)
185 TIGR01549 HAD-SF-IA-v1 haloaci 97.7 0.00028 6.2E-09 60.4 9.6 92 98-212 63-154 (154)
186 COG4996 Predicted phosphatase 97.7 0.00058 1.2E-08 56.1 10.5 103 84-205 1-129 (164)
187 PRK09456 ?-D-glucose-1-phospha 97.7 0.00015 3.3E-09 65.2 7.8 98 99-216 84-182 (199)
188 PRK10671 copA copper exporting 97.6 0.00059 1.3E-08 74.7 13.4 62 320-389 704-765 (834)
189 TIGR01544 HAD-SF-IE haloacid d 97.6 0.0012 2.5E-08 62.3 12.4 33 315-348 196-230 (277)
190 PF06888 Put_Phosphatase: Puta 97.5 0.0039 8.4E-08 57.5 15.3 78 313-391 151-233 (234)
191 PRK10748 flavin mononucleotide 97.5 0.00035 7.5E-09 64.8 8.2 91 100-216 114-205 (238)
192 COG1011 Predicted hydrolase (H 97.5 0.00066 1.4E-08 62.0 9.9 96 100-216 100-196 (229)
193 PRK13225 phosphoglycolate phos 97.5 0.00071 1.5E-08 64.1 9.6 95 100-217 143-237 (273)
194 PLN02919 haloacid dehalogenase 97.4 0.00072 1.6E-08 75.5 10.2 98 101-218 163-261 (1057)
195 TIGR01691 enolase-ppase 2,3-di 97.4 0.00059 1.3E-08 62.5 7.9 98 98-217 94-194 (220)
196 PLN02779 haloacid dehalogenase 97.4 0.0009 1.9E-08 63.9 9.1 102 99-218 144-245 (286)
197 TIGR01993 Pyr-5-nucltdase pyri 97.4 0.00073 1.6E-08 59.8 8.0 95 99-216 84-182 (184)
198 PRK11590 hypothetical protein; 97.3 0.0051 1.1E-07 55.9 13.5 37 318-356 166-202 (211)
199 KOG2961 Predicted hydrolase (H 97.3 0.00086 1.9E-08 56.5 7.0 68 296-363 102-174 (190)
200 PRK10563 6-phosphogluconate ph 97.3 0.001 2.2E-08 60.7 8.1 95 99-216 88-183 (221)
201 TIGR01675 plant-AP plant acid 97.3 0.00037 8E-09 63.9 5.1 63 81-143 75-164 (229)
202 TIGR02468 sucrsPsyn_pln sucros 97.3 0.0021 4.5E-08 70.6 11.6 68 87-165 776-847 (1050)
203 TIGR01522 ATPase-IIA2_Ca golgi 97.3 0.0017 3.7E-08 71.5 11.1 60 82-144 502-570 (884)
204 PF03767 Acid_phosphat_B: HAD 97.2 0.00027 5.8E-09 65.2 3.9 63 81-143 70-159 (229)
205 PF08235 LNS2: LNS2 (Lipin/Ned 97.2 0.0025 5.4E-08 54.9 9.2 52 85-139 1-67 (157)
206 PRK06698 bifunctional 5'-methy 97.1 0.0029 6.2E-08 64.6 10.4 95 100-217 331-425 (459)
207 TIGR01116 ATPase-IIA1_Ca sarco 97.0 0.0075 1.6E-07 66.7 12.8 44 97-143 535-578 (917)
208 PRK11033 zntA zinc/cadmium/mer 96.9 0.013 2.9E-07 63.2 13.9 57 82-141 547-607 (741)
209 PF00702 Hydrolase: haloacid d 96.8 0.005 1.1E-07 55.3 8.2 103 85-212 109-215 (215)
210 TIGR01680 Veg_Stor_Prot vegeta 96.8 0.0022 4.7E-08 60.0 5.8 62 82-143 100-189 (275)
211 PLN03064 alpha,alpha-trehalose 96.7 0.068 1.5E-06 58.6 16.9 57 82-141 590-662 (934)
212 TIGR02251 HIF-SF_euk Dullard-l 96.7 0.0034 7.3E-08 54.7 5.7 108 84-215 2-135 (162)
213 KOG2914 Predicted haloacid-hal 96.5 0.01 2.3E-07 54.2 8.1 102 97-218 90-195 (222)
214 PF05152 DUF705: Protein of un 96.4 0.014 3E-07 54.6 7.7 75 81-163 120-198 (297)
215 TIGR01545 YfhB_g-proteo haloac 96.3 0.0091 2E-07 54.3 6.4 39 100-141 95-134 (210)
216 KOG3085 Predicted hydrolase (H 96.1 0.012 2.5E-07 54.2 6.1 97 99-216 113-210 (237)
217 COG2503 Predicted secreted aci 96.1 0.01 2.2E-07 54.1 5.2 63 82-144 78-168 (274)
218 COG2217 ZntA Cation transport 96.1 0.076 1.6E-06 56.7 12.5 55 85-142 519-577 (713)
219 PRK09552 mtnX 2-hydroxy-3-keto 96.0 0.042 9.2E-07 50.0 9.3 108 99-215 74-183 (219)
220 COG1778 Low specificity phosph 95.6 0.012 2.6E-07 50.2 3.5 79 260-353 44-123 (170)
221 TIGR01493 HAD-SF-IA-v2 Haloaci 95.6 0.015 3.2E-07 50.8 4.3 85 98-209 89-173 (175)
222 PF12689 Acid_PPase: Acid Phos 95.6 0.036 7.8E-07 48.5 6.5 107 252-361 46-156 (169)
223 TIGR01106 ATPase-IIC_X-K sodiu 95.6 0.14 3.1E-06 57.3 12.7 43 98-143 567-609 (997)
224 PHA02597 30.2 hypothetical pro 95.6 0.088 1.9E-06 46.9 9.2 97 99-217 74-172 (197)
225 TIGR01544 HAD-SF-IE haloacid d 95.3 0.12 2.6E-06 48.9 9.6 100 98-209 120-228 (277)
226 PF12710 HAD: haloacid dehalog 95.3 0.02 4.3E-07 50.6 3.9 37 105-144 95-131 (192)
227 TIGR01497 kdpB K+-transporting 95.2 0.35 7.7E-06 51.5 13.4 57 82-141 425-485 (675)
228 TIGR02250 FCP1_euk FCP1-like p 95.1 0.15 3.2E-06 44.1 8.9 39 100-142 59-97 (156)
229 PF06941 NT5C: 5' nucleotidase 94.9 0.042 9.1E-07 49.0 5.1 39 99-137 73-115 (191)
230 KOG3120 Predicted haloacid deh 94.9 0.58 1.3E-05 42.3 12.0 35 325-360 179-214 (256)
231 PRK11133 serB phosphoserine ph 94.9 0.19 4E-06 48.8 9.8 106 100-216 182-288 (322)
232 PRK10517 magnesium-transportin 94.9 0.1 2.2E-06 57.7 8.9 43 97-142 548-590 (902)
233 PF03031 NIF: NLI interacting 94.8 0.031 6.7E-07 48.2 3.7 53 84-140 1-73 (159)
234 TIGR01523 ATPase-IID_K-Na pota 94.7 0.23 4.9E-06 55.9 11.1 43 98-143 645-687 (1053)
235 TIGR01517 ATPase-IIB_Ca plasma 94.7 0.19 4E-06 56.0 10.3 44 97-143 577-620 (941)
236 PRK08238 hypothetical protein; 94.7 0.13 2.9E-06 52.6 8.6 95 253-359 74-168 (479)
237 TIGR03333 salvage_mtnX 2-hydro 94.6 0.19 4.1E-06 45.6 8.7 109 98-215 69-179 (214)
238 TIGR01524 ATPase-IIIB_Mg magne 94.5 0.18 4E-06 55.6 9.7 43 97-142 513-555 (867)
239 TIGR01488 HAD-SF-IB Haloacid D 94.5 0.24 5.2E-06 43.0 8.7 100 100-209 74-175 (177)
240 PRK15122 magnesium-transportin 94.5 0.18 3.9E-06 55.8 9.6 43 97-142 548-590 (903)
241 PLN02954 phosphoserine phospha 94.4 0.37 7.9E-06 43.8 10.1 129 77-215 6-192 (224)
242 COG3882 FkbH Predicted enzyme 94.2 0.23 5E-06 49.8 8.7 108 82-210 221-345 (574)
243 PF11019 DUF2608: Protein of u 94.1 0.52 1.1E-05 44.1 10.6 111 103-216 85-206 (252)
244 KOG3189 Phosphomannomutase [Li 94.1 0.17 3.7E-06 44.9 6.7 104 84-198 12-125 (252)
245 PRK13582 thrH phosphoserine ph 94.1 0.23 5E-06 44.4 7.9 95 100-215 69-167 (205)
246 TIGR01647 ATPase-IIIA_H plasma 94.1 0.31 6.7E-06 52.9 10.1 43 97-142 440-482 (755)
247 PRK14010 potassium-transportin 94.0 0.72 1.6E-05 49.2 12.4 56 83-141 421-480 (673)
248 PRK01122 potassium-transportin 93.9 1.1 2.4E-05 47.9 13.7 57 82-141 424-484 (679)
249 COG3700 AphA Acid phosphatase 93.2 0.48 1E-05 41.4 7.7 88 104-215 119-207 (237)
250 TIGR01652 ATPase-Plipid phosph 93.1 0.33 7.2E-06 54.8 8.8 43 97-142 629-671 (1057)
251 PLN03190 aminophospholipid tra 93.0 1.3 2.8E-05 50.4 13.1 43 97-142 724-766 (1178)
252 TIGR02137 HSK-PSP phosphoserin 92.6 0.94 2E-05 40.9 9.4 100 99-217 68-169 (203)
253 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.3 0.38 8.1E-06 44.5 6.6 90 252-350 25-116 (242)
254 TIGR01452 PGP_euk phosphoglyco 92.3 0.15 3.2E-06 48.4 4.0 110 82-216 131-244 (279)
255 COG0474 MgtA Cation transport 92.3 0.59 1.3E-05 51.9 9.1 45 97-144 545-589 (917)
256 KOG2134 Polynucleotide kinase 92.2 0.15 3.2E-06 49.7 3.7 64 81-144 73-158 (422)
257 TIGR02245 HAD_IIID1 HAD-superf 91.9 0.5 1.1E-05 42.4 6.6 57 82-142 20-84 (195)
258 COG4359 Uncharacterized conser 91.4 1.1 2.4E-05 39.4 7.9 38 100-140 74-111 (220)
259 TIGR02251 HIF-SF_euk Dullard-l 91.3 0.066 1.4E-06 46.5 0.3 93 254-354 45-137 (162)
260 PF05761 5_nucleotid: 5' nucle 91.2 0.36 7.7E-06 48.9 5.5 42 317-358 284-326 (448)
261 KOG0203 Na+/K+ ATPase, alpha s 91.0 1.7 3.6E-05 46.7 10.2 59 83-144 562-632 (1019)
262 KOG0202 Ca2+ transporting ATPa 90.6 1.9 4.1E-05 46.4 10.1 44 98-144 583-626 (972)
263 TIGR01533 lipo_e_P4 5'-nucleot 90.3 0.52 1.1E-05 44.4 5.3 82 253-345 120-204 (266)
264 KOG2116 Protein involved in pl 90.2 0.37 8.1E-06 49.9 4.5 41 83-123 530-582 (738)
265 TIGR01458 HAD-SF-IIA-hyp3 HAD- 90.2 0.36 7.7E-06 45.3 4.2 111 83-217 108-222 (257)
266 KOG3109 Haloacid dehalogenase- 90.1 1.4 2.9E-05 40.0 7.4 97 103-215 104-201 (244)
267 KOG0207 Cation transport ATPas 89.9 13 0.00029 40.5 15.7 57 321-387 778-836 (951)
268 COG4030 Uncharacterized protei 89.6 16 0.00035 33.4 14.0 42 313-356 192-234 (315)
269 COG3700 AphA Acid phosphatase 88.9 1.8 3.9E-05 37.9 7.1 44 311-359 169-214 (237)
270 PF06437 ISN1: IMP-specific 5' 88.8 1.1 2.3E-05 44.0 6.2 55 82-136 146-203 (408)
271 KOG0210 P-type ATPase [Inorgan 88.2 1.6 3.4E-05 45.9 7.3 51 329-388 782-832 (1051)
272 KOG4549 Magnesium-dependent ph 87.6 1.8 4E-05 35.7 5.9 59 84-144 19-87 (144)
273 KOG2961 Predicted hydrolase (H 85.5 3.5 7.6E-05 35.2 6.7 63 82-144 42-113 (190)
274 PRK11590 hypothetical protein; 85.5 6.4 0.00014 35.4 9.2 107 99-218 95-202 (211)
275 PF12710 HAD: haloacid dehalog 83.9 1.3 2.8E-05 38.8 3.8 32 313-346 158-192 (192)
276 KOG0207 Cation transport ATPas 83.2 6.3 0.00014 42.9 9.1 60 81-143 701-764 (951)
277 PF04312 DUF460: Protein of un 82.3 5.3 0.00011 33.5 6.5 59 83-143 43-103 (138)
278 COG5083 SMP2 Uncharacterized p 80.9 2 4.3E-05 42.8 4.1 42 82-123 374-427 (580)
279 TIGR01545 YfhB_g-proteo haloac 78.8 5.2 0.00011 36.2 6.0 33 319-352 166-198 (210)
280 PF01740 STAS: STAS domain; I 77.7 2.6 5.7E-05 33.9 3.4 58 82-144 47-104 (117)
281 KOG2630 Enolase-phosphatase E- 74.0 19 0.00042 33.0 8.0 102 253-358 125-226 (254)
282 PF02571 CbiJ: Precorrin-6x re 73.9 77 0.0017 29.5 14.0 59 317-389 186-248 (249)
283 COG4850 Uncharacterized conser 73.8 7.1 0.00015 37.5 5.5 58 85-142 163-240 (373)
284 PF06189 5-nucleotidase: 5'-nu 73.8 6.5 0.00014 36.7 5.1 60 85-144 123-215 (264)
285 PF06189 5-nucleotidase: 5'-nu 71.7 22 0.00047 33.3 8.0 70 115-215 36-105 (264)
286 cd07041 STAS_RsbR_RsbS_like Su 69.7 7.1 0.00015 30.9 4.0 57 82-143 40-96 (109)
287 cd07043 STAS_anti-anti-sigma_f 69.1 9.8 0.00021 29.1 4.6 56 83-143 38-93 (99)
288 TIGR02886 spore_II_AA anti-sig 68.9 10 0.00022 29.8 4.8 58 82-144 38-95 (106)
289 TIGR00377 ant_ant_sig anti-ant 68.2 15 0.00033 28.7 5.7 57 82-143 42-98 (108)
290 cd06844 STAS Sulphate Transpor 66.3 10 0.00022 29.6 4.2 56 82-142 38-93 (100)
291 TIGR01658 EYA-cons_domain eyes 66.2 15 0.00033 34.0 5.7 46 313-359 215-260 (274)
292 COG5610 Predicted hydrolase (H 65.5 3.4 7.5E-05 41.4 1.6 47 309-355 155-201 (635)
293 KOG0206 P-type ATPase [General 64.1 53 0.0011 37.4 10.5 41 99-142 651-691 (1151)
294 COG4229 Predicted enolase-phos 63.1 20 0.00044 31.7 5.6 107 89-217 85-202 (229)
295 PLN02645 phosphoglycolate phos 61.4 22 0.00047 34.2 6.3 89 253-354 46-136 (311)
296 KOG2470 Similar to IMP-GMP spe 60.7 19 0.00042 35.0 5.5 39 319-357 337-376 (510)
297 TIGR00715 precor6x_red precorr 58.0 1.6E+02 0.0035 27.5 13.7 78 312-391 159-254 (256)
298 COG0602 NrdG Organic radical a 56.5 17 0.00037 33.0 4.4 52 73-124 55-108 (212)
299 TIGR01494 ATPase_P-type ATPase 55.0 49 0.0011 34.0 8.0 57 82-141 326-386 (499)
300 TIGR01457 HAD-SF-IIA-hyp2 HAD- 54.9 15 0.00033 34.0 3.9 35 182-216 185-220 (249)
301 PLN02177 glycerol-3-phosphate 54.7 6 0.00013 40.8 1.2 17 83-99 22-38 (497)
302 KOG1050 Trehalose-6-phosphate 54.1 1.1E+02 0.0023 33.3 10.4 69 309-388 654-730 (732)
303 KOG0204 Calcium transporting A 53.8 91 0.002 34.3 9.6 41 99-142 647-687 (1034)
304 TIGR01657 P-ATPase-V P-type AT 53.6 19 0.00042 40.8 5.1 44 97-143 654-697 (1054)
305 COG1366 SpoIIAA Anti-anti-sigm 52.8 24 0.00052 28.4 4.3 58 82-144 43-100 (117)
306 PF11019 DUF2608: Protein of u 49.3 30 0.00066 32.3 4.9 48 310-358 160-211 (252)
307 PF06437 ISN1: IMP-specific 5' 47.6 25 0.00053 34.8 4.0 43 313-357 350-400 (408)
308 PRK06769 hypothetical protein; 46.2 28 0.00062 30.2 4.0 120 81-217 2-135 (173)
309 TIGR02826 RNR_activ_nrdG3 anae 45.8 56 0.0012 27.7 5.6 34 90-123 62-96 (147)
310 TIGR01656 Histidinol-ppas hist 45.7 32 0.00069 28.9 4.1 118 84-216 1-142 (147)
311 PLN02499 glycerol-3-phosphate 44.6 12 0.00027 38.2 1.6 20 82-101 7-26 (498)
312 COG2099 CobK Precorrin-6x redu 44.5 2.7E+02 0.0059 26.1 13.7 17 342-358 215-231 (257)
313 PF13344 Hydrolase_6: Haloacid 44.1 38 0.00083 26.6 4.1 85 253-350 16-100 (101)
314 PF13242 Hydrolase_like: HAD-h 43.3 35 0.00077 24.9 3.6 36 182-217 11-47 (75)
315 TIGR01657 P-ATPase-V P-type AT 42.3 48 0.001 37.7 6.0 50 329-390 802-853 (1054)
316 COG5663 Uncharacterized conser 39.2 19 0.00041 31.4 1.7 39 320-362 129-167 (194)
317 TIGR00213 GmhB_yaeD D,D-heptos 38.8 46 0.00099 28.8 4.2 113 84-215 2-146 (176)
318 TIGR01664 DNA-3'-Pase DNA 3'-p 38.4 69 0.0015 27.6 5.2 117 81-216 11-159 (166)
319 cd07042 STAS_SulP_like_sulfate 37.2 43 0.00094 25.7 3.5 56 83-143 41-96 (107)
320 PF06014 DUF910: Bacterial pro 37.0 24 0.00052 25.3 1.7 25 317-346 7-31 (62)
321 TIGR01261 hisB_Nterm histidino 36.3 55 0.0012 28.2 4.2 114 84-216 2-144 (161)
322 KOG3107 Predicted haloacid deh 35.6 1.1E+02 0.0023 30.4 6.2 43 313-357 410-452 (468)
323 KOG0208 Cation transport ATPas 35.2 3.3E+02 0.0071 30.7 10.3 50 92-144 698-747 (1140)
324 COG0548 ArgB Acetylglutamate k 33.4 87 0.0019 29.5 5.2 58 83-144 2-59 (265)
325 cd06591 GH31_xylosidase_XylS X 32.2 1.1E+02 0.0024 29.4 6.1 42 82-123 39-87 (319)
326 PF11848 DUF3368: Domain of un 31.1 47 0.001 22.3 2.3 34 97-139 14-47 (48)
327 COG5663 Uncharacterized conser 30.9 48 0.001 29.0 2.8 19 85-103 8-26 (194)
328 PRK11660 putative transporter; 30.2 78 0.0017 33.3 4.9 57 81-143 489-545 (568)
329 PF05761 5_nucleotid: 5' nucle 30.1 40 0.00087 34.3 2.6 24 101-124 185-208 (448)
330 PRK08942 D,D-heptose 1,7-bisph 29.9 84 0.0018 27.2 4.4 116 82-216 2-144 (181)
331 COG0353 RecR Recombinational D 29.8 2.7E+02 0.0058 25.0 7.4 65 80-144 97-168 (198)
332 smart00775 LNS2 LNS2 domain. T 28.8 3.1E+02 0.0067 23.3 7.6 39 313-352 103-142 (157)
333 cd05014 SIS_Kpsf KpsF-like pro 28.1 57 0.0012 26.3 2.8 32 100-131 59-90 (128)
334 cd06595 GH31_xylosidase_XylS-l 28.0 1.1E+02 0.0023 29.1 5.1 42 82-123 40-95 (292)
335 COG2216 KdpB High-affinity K+ 27.9 1.9E+02 0.0041 30.1 6.8 50 92-144 440-489 (681)
336 PTZ00124 adenosine deaminase; 27.9 5.1E+02 0.011 25.5 9.9 35 84-122 192-226 (362)
337 COG4483 Uncharacterized protei 27.8 70 0.0015 23.1 2.7 25 317-346 7-31 (68)
338 TIGR01662 HAD-SF-IIIA HAD-supe 27.8 1.1E+02 0.0023 24.8 4.5 112 84-216 1-128 (132)
339 COG1553 DsrE Uncharacterized c 26.9 1.1E+02 0.0024 25.3 4.1 40 83-122 34-79 (126)
340 KOG2469 IMP-GMP specific 5'-nu 26.4 52 0.0011 32.8 2.6 51 309-359 285-336 (424)
341 PF06117 DUF957: Enterobacteri 26.2 25 0.00055 25.2 0.3 31 83-113 24-54 (65)
342 TIGR02244 HAD-IG-Ncltidse HAD 26.1 33 0.00072 33.6 1.2 28 253-280 186-213 (343)
343 cd05008 SIS_GlmS_GlmD_1 SIS (S 25.2 71 0.0015 25.6 2.9 26 101-126 59-84 (126)
344 PF13466 STAS_2: STAS domain 24.6 1.6E+02 0.0035 21.4 4.6 55 83-142 26-80 (80)
345 cd01766 Ufm1 Urm1-like ubiquit 24.1 96 0.0021 23.0 2.9 46 310-358 25-70 (82)
346 TIGR00815 sulP high affinity s 23.6 80 0.0017 33.1 3.6 57 82-143 493-549 (563)
347 COG0731 Fe-S oxidoreductases [ 23.3 6.7E+02 0.015 24.1 14.6 40 82-125 79-119 (296)
348 PF12694 MoCo_carrier: Putativ 23.2 41 0.00089 28.5 1.0 56 87-142 61-117 (145)
349 PRK05446 imidazole glycerol-ph 23.1 7.3E+02 0.016 24.4 12.5 116 82-216 1-145 (354)
350 cd06598 GH31_transferase_CtsZ 23.0 2.2E+02 0.0048 27.4 6.3 42 82-123 39-91 (317)
351 PF01380 SIS: SIS domain SIS d 22.3 1.4E+02 0.003 23.8 4.1 26 101-126 66-91 (131)
352 cd05710 SIS_1 A subgroup of th 22.2 1E+02 0.0022 24.8 3.2 29 100-128 59-87 (120)
353 COG4996 Predicted phosphatase 22.0 3.9E+02 0.0084 22.5 6.4 78 253-342 43-129 (164)
354 PF06888 Put_Phosphatase: Puta 21.9 1.7E+02 0.0036 27.1 4.9 51 97-155 69-121 (234)
355 KOG0460 Mitochondrial translat 21.9 2.8E+02 0.006 27.4 6.4 34 87-120 138-174 (449)
356 KOG0209 P-type ATPase [Inorgan 21.7 4.5E+02 0.0097 29.2 8.4 47 94-143 670-716 (1160)
357 COG2433 Uncharacterized conser 21.7 2.6E+02 0.0057 29.5 6.6 55 85-141 257-313 (652)
358 TIGR03127 RuMP_HxlB 6-phospho 21.5 1.5E+02 0.0033 25.5 4.5 31 101-131 85-115 (179)
359 cd05013 SIS_RpiR RpiR-like pro 20.7 1.8E+02 0.0039 23.2 4.5 26 102-127 74-99 (139)
360 TIGR02329 propionate_PrpR prop 20.6 2.6E+02 0.0057 29.1 6.6 26 331-358 147-172 (526)
361 COG0050 TufB GTPases - transla 20.1 2.6E+02 0.0056 27.0 5.7 35 87-121 96-133 (394)
No 1
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-41 Score=308.26 Aligned_cols=287 Identities=55% Similarity=0.911 Sum_probs=258.6
Q ss_pred ccHHHHhhcCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce-eeccccccce
Q 016293 74 KNADELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEVKDSFLS 152 (392)
Q Consensus 74 ~~~~~~~~~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~-~~~~~~~f~~ 152 (392)
+..++++..++.|+||+||+||.+..++|++.++++.|++.|..+.++|||+.++++++.+.++.+|+. +.
T Consensus 13 ~~~~e~l~~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~-------- 84 (306)
T KOG2882|consen 13 EEARELLDSFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVK-------- 84 (306)
T ss_pred HHHHHHHhhcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccC--------
Confidence 456778999999999999999999999999999999999999999999999999999999999999998 55
Q ss_pred eeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCc
Q 016293 153 IVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGF 232 (392)
Q Consensus 153 ~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 232 (392)
.++|++++.+++.|+++.. ..++++|+.|...+.++++++|+...+++.+....-....+.
T Consensus 85 ------------------e~~i~ssa~~~a~ylk~~~-~~~k~Vyvig~~gi~~eL~~aG~~~~g~~~~~~~~~~~~~~~ 145 (306)
T KOG2882|consen 85 ------------------EENIFSSAYAIADYLKKRK-PFGKKVYVIGEEGIREELDEAGFEYFGGGPDGKDTDGAKSFV 145 (306)
T ss_pred ------------------cccccChHHHHHHHHHHhC-cCCCeEEEecchhhhHHHHHcCceeecCCCCcccccccccch
Confidence 6899999999999999887 567899999999999999999999888776655442222222
Q ss_pred c-ccCCCCccEEEEEeccCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCC
Q 016293 233 L-MEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGK 311 (392)
Q Consensus 233 ~-~~~~~~~~~v~~~~d~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gK 311 (392)
. ...+.++++|++++|..++|.++.+++..|+ ++++.+++||.|...+......++|.|+++.++..++++++..+||
T Consensus 146 ~~~~~d~~VgAVvvg~D~hfsy~KL~kA~~yLq-nP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v~GK 224 (306)
T KOG2882|consen 146 LSIGLDPDVGAVVVGYDEHFSYPKLMKALNYLQ-NPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIVLGK 224 (306)
T ss_pred hhcCCCCCCCEEEEecccccCHHHHHHHHHHhC-CCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCeecCC
Confidence 2 2236779999999999999999999999988 6999999999999888777889999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCC--CCCCCCcEEECChhhHHHhH
Q 016293 312 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP--NNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 312 P~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~--~~~~~pd~v~~sl~el~~~~ 388 (392)
|++.+++.+.+++++.|++|+||||+|.+||..++++|+.|++|.+|.+..++++.. .....|||+++++.++....
T Consensus 225 P~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~ 303 (306)
T KOG2882|consen 225 PSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLL 303 (306)
T ss_pred CCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999998888765 56678999999999998654
No 2
>PLN02645 phosphoglycolate phosphatase
Probab=100.00 E-value=1.8e-39 Score=312.76 Aligned_cols=296 Identities=90% Similarity=1.388 Sum_probs=250.1
Q ss_pred CCCccHHHHhhcCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecccccc
Q 016293 71 QPLKNADELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSF 150 (392)
Q Consensus 71 ~~~~~~~~~~~~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f 150 (392)
+..+.+.+++..|++|+||+|||||++..++|++.++|++|+++|++++++||++.++...+.+.|+.+|+...
T Consensus 16 ~~~~~~~~~~~~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~------ 89 (311)
T PLN02645 16 LTLENADELIDSVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT------ 89 (311)
T ss_pred CCHHHHHHHHHhCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCC------
Confidence 44566777888999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCC
Q 016293 151 LSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKP 230 (392)
Q Consensus 151 ~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 230 (392)
.++++++...+..+++..++..+.++|+.|...+.++++..|+....++.+.........
T Consensus 90 --------------------~~~I~ts~~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~g~~~~~~~~~~~~ 149 (311)
T PLN02645 90 --------------------EEEIFSSSFAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLGGPEDGDKKIELKP 149 (311)
T ss_pred --------------------hhhEeehHHHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEecCcccccccccccc
Confidence 689999999999999987765567899999999999999999988765433221111112
Q ss_pred CccccCCCCccEEEEEeccCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccC
Q 016293 231 GFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVG 310 (392)
Q Consensus 231 ~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g 310 (392)
....+...++++|+++.++.++|.++..+..+++.+++..+|+||++...........++.+.++..+..+.+.++...|
T Consensus 150 ~~~~~~~~~i~aVvvg~d~~~~~~~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~g 229 (311)
T PLN02645 150 GFLMEHDKDVGAVVVGFDRYINYYKIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVG 229 (311)
T ss_pred ccccccCCCCCEEEEecCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCC
Confidence 22233446678999999999999999999999976678999999999865444444677888899999998888887789
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 311 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 311 KP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
||+|.+|+.+++++|+++++++||||++.+||.+|+++|+++|+|.||.+..+.+.+.+....||++++++.+|.+++++
T Consensus 230 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~~ 309 (311)
T PLN02645 230 KPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKAA 309 (311)
T ss_pred CChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhhc
Confidence 99999999999999999999999999966999999999999999999998877664322346799999999999998877
Q ss_pred hC
Q 016293 391 AV 392 (392)
Q Consensus 391 ~~ 392 (392)
.+
T Consensus 310 ~~ 311 (311)
T PLN02645 310 TV 311 (311)
T ss_pred CC
Confidence 53
No 3
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-38 Score=294.37 Aligned_cols=265 Identities=38% Similarity=0.642 Sum_probs=237.3
Q ss_pred HHhhcCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHh-CCceeeccccccceeeec
Q 016293 78 ELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEVKDSFLSIVCL 156 (392)
Q Consensus 78 ~~~~~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~-lgl~~~~~~~~f~~~i~~ 156 (392)
+.+.+|++++||+||||+++...+|++.++|+.|+++|++++++|||++|++..+.+.|.. ++++..
T Consensus 3 ~~~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~------------ 70 (269)
T COG0647 3 DVMDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVT------------ 70 (269)
T ss_pred chhhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCC------------
Confidence 4567899999999999999999999999999999999999999999999999999999998 666666
Q ss_pred ccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCccccC
Q 016293 157 KFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEH 236 (392)
Q Consensus 157 ~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 236 (392)
.+.++++..+++.++.+.. +..++|+.|.+.+.++++..|+.......
T Consensus 71 --------------~~~i~TS~~at~~~l~~~~--~~~kv~viG~~~l~~~l~~~G~~~~~~~~---------------- 118 (269)
T COG0647 71 --------------PDDIVTSGDATADYLAKQK--PGKKVYVIGEEGLKEELEGAGFELVDEEE---------------- 118 (269)
T ss_pred --------------HHHeecHHHHHHHHHHhhC--CCCEEEEECCcchHHHHHhCCcEEeccCC----------------
Confidence 7999999999999998753 33789999999999999999998753211
Q ss_pred CCCccEEEEEeccCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHH
Q 016293 237 DKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFM 316 (392)
Q Consensus 237 ~~~~~~v~~~~d~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~ 316 (392)
...+++++++.|+...|+++.+++..++ .+..+|+||+|...+.... ..++.|++...+..+++.++...|||++.+
T Consensus 119 ~~~~d~Vv~g~d~~~~~e~l~~a~~~i~--~g~~fI~tNpD~~~p~~~g-~~pgaGai~~~~~~~tg~~~~~~GKP~~~i 195 (269)
T COG0647 119 PARVDAVVVGLDRTLTYEKLAEALLAIA--AGAPFIATNPDLTVPTERG-LRPGAGAIAALLEQATGREPTVIGKPSPAI 195 (269)
T ss_pred CCcccEEEEecCCCCCHHHHHHHHHHHH--cCCcEEEeCCCccccCCCC-CccCcHHHHHHHHHhhCCcccccCCCCHHH
Confidence 1225899999999999999999999988 4689999999998876555 789999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHhh
Q 016293 317 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA 391 (392)
Q Consensus 317 ~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~~ 391 (392)
|+.+++.++.++++|+||||++++||.+|+++|+.+++|.+|.++.+++.. .+.+|+|+.+++.++..+..+.
T Consensus 196 ~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~--~~~~p~~v~~sl~~~~~~~~~~ 268 (269)
T COG0647 196 YEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDR--AEVKPTYVVDSLAELITALKEL 268 (269)
T ss_pred HHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhh--hccCCcchHhhHHHHHhhhhcc
Confidence 999999999999999999999999999999999999999999998887653 3578999999999998877653
No 4
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=100.00 E-value=2.6e-36 Score=286.79 Aligned_cols=275 Identities=44% Similarity=0.778 Sum_probs=226.9
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccC
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRI 161 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~ 161 (392)
+|++|+||+||||+++...+|++.++|++|+++|++++++|||+.++...+...|+.+|+...
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~----------------- 63 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL----------------- 63 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC-----------------
Confidence 489999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCccccCCCCcc
Q 016293 162 PSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVG 241 (392)
Q Consensus 162 ~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (392)
.++++++...+..++++... +..++++.|...+.+.++..|+.....+.+................++++
T Consensus 64 ---------~~~i~ts~~~~~~~l~~~~~-~~~~v~~iG~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (279)
T TIGR01452 64 ---------AEQLFSSALCAARLLRQPPD-APKAVYVIGEEGLRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVG 133 (279)
T ss_pred ---------hhhEecHHHHHHHHHHhhCc-CCCEEEEEcCHHHHHHHHHCCCEEecCcccccccchhhcccccccCCCCC
Confidence 68899999999999988533 34679999999899999999998765433221110111111122245789
Q ss_pred EEEEEeccCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHH
Q 016293 242 AVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLA 321 (392)
Q Consensus 242 ~v~~~~d~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~ 321 (392)
+|+++.+..++|+.+.+++..++. .+.++|+||++............+.+.++..+...++.+....|||+|.+|+.++
T Consensus 134 ~Vvv~~d~~~~y~~i~~~l~~L~~-~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~ 212 (279)
T TIGR01452 134 AVVVGYDEHFSYAKLREACAHLRE-PGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECIT 212 (279)
T ss_pred EEEEecCCCCCHHHHHHHHHHHhc-CCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHH
Confidence 999999999999999999999975 4678999999986653333446677777888887777777778999999999999
Q ss_pred HHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCC----CCCCCCcEEECChhhH
Q 016293 322 NKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP----NNSIQPDFYTNKISDF 384 (392)
Q Consensus 322 ~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~----~~~~~pd~v~~sl~el 384 (392)
+++|+++++|+||||++.+||.+|+++|+++|+|.||++..+.+++. .....|||+++++.||
T Consensus 213 ~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 213 ENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred HHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999999999996699999999999999999999988777531 2346899999999875
No 5
>PRK10444 UMP phosphatase; Provisional
Probab=100.00 E-value=4.8e-36 Score=279.24 Aligned_cols=245 Identities=31% Similarity=0.537 Sum_probs=219.5
Q ss_pred CcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCC
Q 016293 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIP 162 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~ 162 (392)
||+|+||+|||||++..++|++.++|++|+++|++++++||++.++...+.+.|+.+|++..
T Consensus 1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~------------------ 62 (248)
T PRK10444 1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP------------------ 62 (248)
T ss_pred CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC------------------
Confidence 68999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCccccCCCCccE
Q 016293 163 SPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGA 242 (392)
Q Consensus 163 ~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (392)
.++++++..++..|+++.. ..++|+.|...+.+++...|+... ..+++.
T Consensus 63 --------~~~i~ts~~~~~~~L~~~~---~~~v~~~g~~~l~~~l~~~g~~~~--------------------~~~~~~ 111 (248)
T PRK10444 63 --------DSVFYTSAMATADFLRRQE---GKKAYVIGEGALIHELYKAGFTIT--------------------DINPDF 111 (248)
T ss_pred --------HhhEecHHHHHHHHHHhCC---CCEEEEEcCHHHHHHHHHCcCEec--------------------CCCCCE
Confidence 7899999999999998852 356899999999999998887652 345678
Q ss_pred EEEEeccCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHH
Q 016293 243 VVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLAN 322 (392)
Q Consensus 243 v~~~~d~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~ 322 (392)
|+++.+..++|.++..+...++ ++..+|++|+|.... ...++.|.+...+....+.++...|||+|.+++.+++
T Consensus 112 Vvvg~~~~~~~~~l~~a~~~l~--~g~~~i~~n~D~~~~----g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~ 185 (248)
T PRK10444 112 VIVGETRSYNWDMMHKAAYFVA--NGARFIATNPDTHGR----GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALN 185 (248)
T ss_pred EEEeCCCCCCHHHHHHHHHHHH--CCCEEEEECCCCCCC----CCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHH
Confidence 9999999999999999998886 588999999998432 3567888888889999998888889999999999999
Q ss_pred HcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhH
Q 016293 323 KFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 384 (392)
Q Consensus 323 ~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el 384 (392)
++++++++|+||||++.+||.+|+++|+++++|.||.+..+.+++ ...+||++++++.||
T Consensus 186 ~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~--~~~~pd~~~~sl~el 245 (248)
T PRK10444 186 KMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDS--MPFRPSWIYPSVADI 245 (248)
T ss_pred HcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhc--CCCCCCEEECCHHHh
Confidence 999999999999999769999999999999999999998877752 346899999999998
No 6
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=100.00 E-value=1.1e-35 Score=277.70 Aligned_cols=249 Identities=31% Similarity=0.525 Sum_probs=220.2
Q ss_pred CcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCC
Q 016293 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIP 162 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~ 162 (392)
+|+|+||+||||+++..++|++.++|++|+++|++++++|||++|+...+...++.+|++..
T Consensus 1 ~~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~------------------ 62 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT------------------ 62 (249)
T ss_pred CCEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC------------------
Confidence 58999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCccccCCCCccE
Q 016293 163 SPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGA 242 (392)
Q Consensus 163 ~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (392)
.++++++..++..++++.+ ....+++.|...+.++++..|+... ..+++.
T Consensus 63 --------~~~iit~~~~~~~~l~~~~--~~~~v~~lg~~~l~~~l~~~g~~~~--------------------~~~~~~ 112 (249)
T TIGR01457 63 --------LETVFTASMATADYMNDLK--LEKTVYVIGEEGLKEAIKEAGYVED--------------------KEKPDY 112 (249)
T ss_pred --------hhhEeeHHHHHHHHHHhcC--CCCEEEEEcChhHHHHHHHcCCEec--------------------CCCCCE
Confidence 7899999999999998864 3477999999999999998887651 346778
Q ss_pred EEEEeccCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHH
Q 016293 243 VVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLAN 322 (392)
Q Consensus 243 v~~~~d~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~ 322 (392)
|+++++..++|+++..++..++ .+..+|++|+|...+... ...++.+.+...+...++.+....+||+|.+|+.+++
T Consensus 113 Vvvg~~~~~~y~~l~~a~~~l~--~g~~~i~tN~D~~~~~~~-~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~ 189 (249)
T TIGR01457 113 VVVGLDRQIDYEKFATATLAIR--KGAHFIGTNGDLAIPTER-GLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVE 189 (249)
T ss_pred EEEeCCCCCCHHHHHHHHHHHH--CCCeEEEECCCCCCCCCC-CCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHH
Confidence 9999999999999999998886 588899999999876433 3567888888888888888888889999999999999
Q ss_pred HcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhH
Q 016293 323 KFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 384 (392)
Q Consensus 323 ~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el 384 (392)
++++++++++||||++.+||.+|+++|+++++|.||.+..+.+.. ....||++++++.|+
T Consensus 190 ~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~--~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 190 HLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAG--LPIAPTHVVSSLAEW 249 (249)
T ss_pred HcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhc--CCCCCCEEeCChhhC
Confidence 999999999999999658999999999999999999987766542 335799999999874
No 7
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=100.00 E-value=3.3e-33 Score=262.11 Aligned_cols=250 Identities=23% Similarity=0.362 Sum_probs=209.1
Q ss_pred CcEEEEEccCceecCCe----eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccc
Q 016293 83 VETFIFDCDGVIWKGDK----LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKF 158 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~----~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~ 158 (392)
+|+|+||+|||||++.. ++|++.++|++|+++|++++++|||+.+++..+...++.+|++..
T Consensus 1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~-------------- 66 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDIS-------------- 66 (257)
T ss_pred CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCC--------------
Confidence 57999999999999877 999999999999999999999999999999999999999999877
Q ss_pred ccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCccccCCC
Q 016293 159 HRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDK 238 (392)
Q Consensus 159 ~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (392)
.++++++...+..++++.+. ++|+.+.+.....+. ++. ..
T Consensus 67 ------------~~~i~ts~~~~~~~l~~~~~----~~~~~g~~~~~~~~~--~~~----------------------~~ 106 (257)
T TIGR01458 67 ------------EDEVFTPAPAARQLLEEKQL----RPMLLVDDRVLPDFD--GID----------------------TS 106 (257)
T ss_pred ------------HHHeEcHHHHHHHHHHhcCC----CeEEEECccHHHHhc--cCC----------------------CC
Confidence 79999999999999988642 367777766655543 221 23
Q ss_pred CccEEEEEecc-CCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHH
Q 016293 239 DVGAVVVGFDR-YFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMM 317 (392)
Q Consensus 239 ~~~~v~~~~d~-~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~ 317 (392)
++++++++.+. .++|+++..++..++..+...++++|.+....... ...++.+.++..+..+.+.+....+||+|.+|
T Consensus 107 ~~~~Vv~g~~~~~~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~-~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~ 185 (257)
T TIGR01458 107 DPNCVVMGLAPEHFSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKD-GLALDVGPFVTALEYATDTKATVVGKPSKTFF 185 (257)
T ss_pred CCCEEEEecccCccCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCC-CCCCCchHHHHHHHHHhCCCceeecCCCHHHH
Confidence 45688999865 68899999999999865556789999998765433 34568888888888888888777899999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 318 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 318 ~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
+.+++++|+++++|+||||++.+||.+|+++|+.+++|.||....+..+ .....||++++++.||.+++.
T Consensus 186 ~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~--~~~~~pd~~~~sl~el~~~l~ 255 (257)
T TIGR01458 186 LEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEE--KINVPPDLTCDSLPHAVDLIL 255 (257)
T ss_pred HHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhc--ccCCCCCEEECCHHHHHHHHh
Confidence 9999999999999999999966999999999999999999975444332 123679999999999998764
No 8
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.97 E-value=1.1e-30 Score=252.59 Aligned_cols=271 Identities=22% Similarity=0.258 Sum_probs=211.8
Q ss_pred EEEEEccCceecCCeeCCCHHHHHHHHHHC----CCcEEEEeCCCCCCHHHHHHhh-HhCCceeeccccccceeeecccc
Q 016293 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSK----GKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEVKDSFLSIVCLKFH 159 (392)
Q Consensus 85 ~vifDlDGTL~d~~~~~~~~~eal~~l~~~----Gi~~~i~Tn~~gr~~~~~~~~l-~~lgl~~~~~~~~f~~~i~~~~~ 159 (392)
+|+|||||||+++..+++++.++++.|+.+ |+++.++||++|++...+.+.| +.+|++..
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~--------------- 66 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVS--------------- 66 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCC---------------
Confidence 689999999999999999999999999999 9999999999999999988888 88999877
Q ss_pred cCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCC---Ccc---cccCC---
Q 016293 160 RIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDG---GKK---IELKP--- 230 (392)
Q Consensus 160 ~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~---~~~---~~~~~--- 230 (392)
.++++++...+..++++++ .++++.|+....+.++..|+..+....+. .+. |....
T Consensus 67 -----------~~~i~~s~~~~~~ll~~~~----~~v~viG~~~~~~~l~~~G~~~vv~~~~~~~~~p~~~~~~~~~~~~ 131 (321)
T TIGR01456 67 -----------PLQVIQSHSPYKSLVNKYE----KRILAVGTGSVRGVAEGYGFQNVVHQDEIVRYFRDIDPFSGMSDEQ 131 (321)
T ss_pred -----------HHHHHhhhHHHHHHHHHcC----CceEEEeChHHHHHHHHcCCcccccHHHHHhcCCCCCcccccCHHH
Confidence 6888888877777776542 36788898888899999998753211110 000 00000
Q ss_pred ----Cccc--cCCCCccEEEEEeccCCCHHHHHHHHHHHHhC---------CCcEEEEecCCccccccccccccCCCccc
Q 016293 231 ----GFLM--EHDKDVGAVVVGFDRYFNYYKVQYGTLCIREN---------PGCLFIATNRDAVTHLTDAQEWAGGGSMV 295 (392)
Q Consensus 231 ----~~~~--~~~~~~~~v~~~~d~~~~~~~~~~~~~~l~~~---------~g~~~I~tn~d~~~~~~~~~~~~~~~~~~ 295 (392)
.... ....++++|+++.+...++.+++.+...++.. +.+.++++|+|..++.......++.|++.
T Consensus 132 ~~~~~~~~~~~~~~~~~aVvv~~d~~~~~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~ 211 (321)
T TIGR01456 132 VREYSRDIPDLTTKRFDAVLVFNDPVDWAADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFR 211 (321)
T ss_pred hhcccccccccCCCceeEEEEecCchHHhhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHH
Confidence 0000 01247889999998888888888888888752 23679999999988755544467889888
Q ss_pred eeeec----ccCCCc--cccCCCcHHHHHHHHHHc--------CC-----CCCcEEEEcCCchhhHHHHHHcCCeEEEEe
Q 016293 296 GAFVG----STQREP--LVVGKPSTFMMDYLANKF--------GI-----QKSQICMVGDRLDTDILFGQNGGCKTLLVL 356 (392)
Q Consensus 296 ~~i~~----~~~~~~--~~~gKP~p~~~~~~~~~l--------gv-----~~~evi~IGD~l~nDI~ma~~aG~~~i~V~ 356 (392)
..+.. +++.+. ...|||++.+|+.+++.+ ++ ++++++||||++.+||.+|+++|+.+|+|.
T Consensus 212 ~~l~~~~~~~tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~ 291 (321)
T TIGR01456 212 LLLERIYLELNGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVK 291 (321)
T ss_pred HHHHHHHHHhcCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEec
Confidence 88887 455543 578999999999998888 43 457999999998899999999999999999
Q ss_pred cCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 357 SGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 357 ~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
+|....++. .....|+++++|+.|+++++
T Consensus 292 tG~~~~~~~---~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 292 TGVYNGGDD---LKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred ccccCCCCC---CCCCCCCEEECCHHHHHHHh
Confidence 997665442 23467999999999999875
No 9
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.97 E-value=9.2e-30 Score=235.97 Aligned_cols=232 Identities=38% Similarity=0.576 Sum_probs=196.4
Q ss_pred EEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHh-CCceeeccccccceeeecccccCCCC
Q 016293 86 FIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEVKDSFLSIVCLKFHRIPSP 164 (392)
Q Consensus 86 vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~-lgl~~~~~~~~f~~~i~~~~~~~~~~ 164 (392)
|+||+||||+++..++|++.++|+.++++|+++.++||+++|+..++.+.|.. +|++..
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~-------------------- 60 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVS-------------------- 60 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCC--------------------
Confidence 58999999999999999999999999999999999999999999999999988 899876
Q ss_pred CCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce--ecCCCCCCcccccCCCccccCCCCccE
Q 016293 165 NSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY--LGGPEDGGKKIELKPGFLMEHDKDVGA 242 (392)
Q Consensus 165 ~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (392)
.++++++...+..++++.. ++.++++.|...+.++++..|+.. ... ....+.++.++.
T Consensus 61 ------~~~iits~~~~~~~l~~~~--~~~~v~v~G~~~~~~~l~~~g~~~~~~~~------------~~~~~~~~~~~~ 120 (236)
T TIGR01460 61 ------PDQIITSGSVTKDLLRQRF--EGEKVYVIGVGELRESLEGLGFRNDFFDD------------IDHLAIEKIPAA 120 (236)
T ss_pred ------HHHeeeHHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHHcCCcCcccCc------------ccccccCCCCeE
Confidence 7999999999999998753 446799999999999999888752 100 000112344678
Q ss_pred EEEEeccCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHH
Q 016293 243 VVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLAN 322 (392)
Q Consensus 243 v~~~~d~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~ 322 (392)
++++.+..++|.++..+...++. ++..++++|+|...........++.+.++..+....+.+....+||+|.+|+.+++
T Consensus 121 vv~~~~~~~~~~~~~~a~~~l~~-~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~ 199 (236)
T TIGR01460 121 VIVGEPSDFSYDELAKAAYLLAE-GDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALN 199 (236)
T ss_pred EEECCCCCcCHHHHHHHHHHHhC-CCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHH
Confidence 88899999999999988888873 33899999988755554445677888888888888888777789999999999999
Q ss_pred HcCCCCCcE-EEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 323 KFGIQKSQI-CMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 323 ~lgv~~~ev-i~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
+++++++++ +||||++.+||.+|+++|+++++|.||
T Consensus 200 ~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 200 LLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred HhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 999999887 999999658999999999999999886
No 10
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.97 E-value=1.5e-29 Score=219.29 Aligned_cols=253 Identities=28% Similarity=0.447 Sum_probs=218.6
Q ss_pred hcCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
..++.+++|+-|||+++...+|++.||+++|+.++.++-++||.++.+...+.+.|..+|+++.
T Consensus 5 ~~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~---------------- 68 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVS---------------- 68 (262)
T ss_pred cccceEEEeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCcc----------------
Confidence 4689999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCccccCCCCc
Q 016293 161 IPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDV 240 (392)
Q Consensus 161 ~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (392)
.++|+++..++.+++++.++. .|+.-.++.++.+. |+ ...++
T Consensus 69 ----------eeei~tsl~aa~~~~~~~~lr----P~l~v~d~a~~dF~--gi----------------------dTs~p 110 (262)
T KOG3040|consen 69 ----------EEEIFTSLPAARQYLEENQLR----PYLIVDDDALEDFD--GI----------------------DTSDP 110 (262)
T ss_pred ----------HHHhcCccHHHHHHHHhcCCC----ceEEEcccchhhCC--Cc----------------------cCCCC
Confidence 799999999999999998774 23333333322221 22 23578
Q ss_pred cEEEEEec-cCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHH
Q 016293 241 GAVVVGFD-RYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDY 319 (392)
Q Consensus 241 ~~v~~~~d-~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~ 319 (392)
+.++++.. +.++|..++++++.|.+.+....|..+..+++..... .-.+.|.+...++++++.+...+|||+|.+|+.
T Consensus 111 n~VViglape~F~y~~ln~AFrvL~e~~k~~LIai~kgryykr~~G-l~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~ 189 (262)
T KOG3040|consen 111 NCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLIAIGKGRYYKRVDG-LCLGPGPFVAALEYATGCEATVVGKPSPFFFES 189 (262)
T ss_pred CeEEEecCcccccHHHHHHHHHHHHcCCCCeEEEecCceeeeeccc-cccCchHHHHHhhhccCceEEEecCCCHHHHHH
Confidence 89999875 6799999999999999888788999999987765444 356788899999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 320 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 320 ~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
+++-+|++|++++||||.+..|+-+|++.||+.|+|.||...+.+.. +.+..||.+++++.|.++++.+
T Consensus 190 al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~--k~~~~p~~~~d~f~~AVd~I~q 258 (262)
T KOG3040|consen 190 ALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEE--KPPVPPDLTADNFADAVDLIIQ 258 (262)
T ss_pred HHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccc--cCCCCcchhhhhHHHHHHHHHh
Confidence 99999999999999999998899999999999999999987774433 3557899999999999998865
No 11
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.95 E-value=5.4e-27 Score=218.38 Aligned_cols=232 Identities=21% Similarity=0.219 Sum_probs=173.1
Q ss_pred HHhhcCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee-eccccccceeeec
Q 016293 78 ELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV-TEVKDSFLSIVCL 156 (392)
Q Consensus 78 ~~~~~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~-~~~~~~f~~~i~~ 156 (392)
+++++|++++||+||||++...++|++.++|++|+++|++++++||+ +|+...+.+.++.+|+.. . |
T Consensus 3 ~~~~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~-~~~~~~~~~~L~~~gl~~~~-----~------ 70 (242)
T TIGR01459 3 DLINDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNS-PRNIFSLHKTLKSLGINADL-----P------ 70 (242)
T ss_pred hhhhcCCEEEEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCC-CCChHHHHHHHHHCCCCccc-----c------
Confidence 46788999999999999999999999999999999999999999995 577777778899999986 5 3
Q ss_pred ccccCCCCCCCCcchhhhhchHHHHHHHH----HhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCc
Q 016293 157 KFHRIPSPNSSEFSQEEIFASSFAAAAYL----KSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGF 232 (392)
Q Consensus 157 ~~~~~~~~~~~~~~~e~i~~~~~~~~~~l----~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 232 (392)
+.++++......++ ++.+..+..++++++...+.+.+...+....
T Consensus 71 ---------------~~Ii~s~~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~---------------- 119 (242)
T TIGR01459 71 ---------------EMIISSGEIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYTTDD---------------- 119 (242)
T ss_pred ---------------ceEEccHHHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCcccc----------------
Confidence 44444443333333 3444444555666555545555544333210
Q ss_pred cccCCCCccEEEEEec--cCCCHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccC
Q 016293 233 LMEHDKDVGAVVVGFD--RYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVG 310 (392)
Q Consensus 233 ~~~~~~~~~~v~~~~d--~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g 310 (392)
+...+++.++++.+ ..++|+.+...+..+.. .+..+|+||++..+... .....+.+.++..+.. .+.+....|
T Consensus 120 --~~~~~~~~vvv~~~~~~~~~~~~~~~~l~~l~~-~g~~~i~tN~d~~~~~~-~~~~~~~g~~~~~i~~-~g~~~~~~g 194 (242)
T TIGR01459 120 --ENKANASLITIYRSENEKLDLDEFDELFAPIVA-RKIPNICANPDRGINQH-GIYRYGAGYYAELIKQ-LGGKVIYSG 194 (242)
T ss_pred --CCcccCcEEEEcCCCcccCCHHHHHHHHHHHHh-CCCcEEEECCCEeccCC-CceEecccHHHHHHHH-hCCcEecCC
Confidence 01234567777755 44789999988887754 57778999999877643 3455677777666544 344556689
Q ss_pred CCcHHHHHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHcCCeEEEEec
Q 016293 311 KPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKTLLVLS 357 (392)
Q Consensus 311 KP~p~~~~~~~~~lgv~-~~evi~IGD~l~nDI~ma~~aG~~~i~V~~ 357 (392)
||+|.+|+.+++++|.. +++|+||||++.+||.+|+++|+.+++|.|
T Consensus 195 KP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 195 KPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred CCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 99999999999999975 679999999966999999999999999975
No 12
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.83 E-value=1.1e-19 Score=171.88 Aligned_cols=249 Identities=12% Similarity=0.141 Sum_probs=137.1
Q ss_pred cCcEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 82 SVETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
++|+|+|||||||++++ .+.+.++++|++++++|++++++| ||+...+...++.+++..+ +||.||+.
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaT---GR~~~~~~~~~~~l~~~~~--------~I~~NGa~ 70 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVT---GRHHVAIHPFYQALALDTP--------AICCNGTY 70 (272)
T ss_pred CccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEc---CCChHHHHHHHHhcCCCCC--------EEEcCCcE
Confidence 48999999999999854 577789999999999999999999 9999999999999988643 78888888
Q ss_pred CCCCCCCCcchhhhhch--HHHHHHHHHhcCCCCCCEEEEEeCcchH-----HHHHHcCCceecCCCCCCcccccCCCcc
Q 016293 161 IPSPNSSEFSQEEIFAS--SFAAAAYLKSIDFPKDKKVYVVGEDGIL-----KELELAGFQYLGGPEDGGKKIELKPGFL 233 (392)
Q Consensus 161 ~~~~~~~~~~~e~i~~~--~~~~~~~l~~~~~~~~~~~~v~~~~~~~-----~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 233 (392)
+.++...++..+..+.. ...+.+++++.++. ..+......+ ...... ..+...
T Consensus 71 i~d~~~~~~l~~~~l~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------- 130 (272)
T PRK10530 71 LYDYQAKKVLEADPLPVQQALQVIEMLDEHQIH----GLMYVDDAMLYEHPTGHVIRT-LNWAQT--------------- 130 (272)
T ss_pred EEecCCCEEEEecCCCHHHHHHHHHHHHhCCcE----EEEEcCCceEecCchHHHHHH-hhhhhc---------------
Confidence 87643322222222221 12233445444331 2222111110 000000 000000
Q ss_pred ccCCCCccEEEEEeccCCCHHHHHHHHHHHHhCCCcEEEEecCCcccc-ccccccccCCCccceeeecccCCCccccCCC
Q 016293 234 MEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTH-LTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 312 (392)
Q Consensus 234 ~~~~~~~~~v~~~~d~~~~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP 312 (392)
........ +..+......+........++++...... ......+................+....+..
T Consensus 131 --~~~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~ 199 (272)
T PRK10530 131 --LPPEQRPT---------FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNS 199 (272)
T ss_pred --cchhcccc---------eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCC
Confidence 00000000 00001111111111122223333221000 0000000000000001111112344556777
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChh
Q 016293 313 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 382 (392)
Q Consensus 313 ~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~ 382 (392)
|+.+++.+++++|+++++|++|||+ .||++|++.+|+ .|.+|... +.++ ..+++++.+-.
T Consensus 200 K~~~l~~l~~~~gi~~~e~i~~GD~-~NDi~m~~~ag~---~vamgna~-~~lk-----~~Ad~v~~~n~ 259 (272)
T PRK10530 200 KGKRLTQWVEAQGWSMKNVVAFGDN-FNDISMLEAAGL---GVAMGNAD-DAVK-----ARADLVIGDNT 259 (272)
T ss_pred hHHHHHHHHHHcCCCHHHeEEeCCC-hhhHHHHHhcCc---eEEecCch-HHHH-----HhCCEEEecCC
Confidence 8999999999999999999999999 699999999995 55566544 4454 35899887643
No 13
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.80 E-value=6.9e-19 Score=166.32 Aligned_cols=239 Identities=14% Similarity=0.128 Sum_probs=135.6
Q ss_pred cCcEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 82 SVETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
++|+|++||||||++.. .+.+.+.++|++++++|++++++| ||+...+...++.+++... ..++||.||+.
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~~~-----~~~~I~~NGa~ 73 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTT---GRPYAGVHRYLKELHMEQP-----GDYCITNNGAL 73 (270)
T ss_pred ceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEec---CCChHHHHHHHHHhCCCCC-----CCeEEEcCCeE
Confidence 48999999999999854 566789999999999999999999 9999999999999998643 34688999998
Q ss_pred CCCCCCCCcchhhhhchH--HHHHHHHHhcCCCCCCEEEEEeCcch---------HHHHHHc--CCceecCCCCCCcccc
Q 016293 161 IPSPNSSEFSQEEIFASS--FAAAAYLKSIDFPKDKKVYVVGEDGI---------LKELELA--GFQYLGGPEDGGKKIE 227 (392)
Q Consensus 161 ~~~~~~~~~~~e~i~~~~--~~~~~~l~~~~~~~~~~~~v~~~~~~---------~~~l~~~--g~~~~~~~~~~~~~~~ 227 (392)
+.++...++..+..+... ....+++++.++. +.+.+.+.. ....... +.+. .+.
T Consensus 74 i~~~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 140 (270)
T PRK10513 74 VQKAADGETVAQTALSYDDYLYLEKLSREVGVH----FHALDRNTLYTANRDISYYTVHESFLTGIPL---------VFR 140 (270)
T ss_pred EEECCCCCEEEecCCCHHHHHHHHHHHHHcCCc----EEEEECCEEEEecCCcchhHHHhhhhccCCc---------ccc
Confidence 875433222222222221 2233444444432 222221111 0000000 0000 000
Q ss_pred cCCCccccCCCCccEEEEEeccCCCHHHHHHHHHHHHhC-CCcEEEEecCCccccccccccccCCCccceeeecccCCCc
Q 016293 228 LKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIREN-PGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP 306 (392)
Q Consensus 228 ~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~l~~~-~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 306 (392)
.... ......+..+++. .. ..........+... .+...+.. +.....+.
T Consensus 141 ~~~~--~~~~~~~~k~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~------------------------s~~~~~eI 190 (270)
T PRK10513 141 EVEK--MDPNLQFPKVMMI-DE---PEILDAAIARIPAEVKERYTVLK------------------------SAPYFLEI 190 (270)
T ss_pred chhh--ccccCCceEEEEe-CC---HHHHHHHHHHhHHHhcCcEEEEE------------------------ecCeeEEE
Confidence 0000 0000111112111 10 11111111111100 00000000 01112344
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECCh
Q 016293 307 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI 381 (392)
Q Consensus 307 ~~~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl 381 (392)
+..+..|..+++.+++++|++++++++|||+ .||++|.+.+|+ .|..+...+ .++ ..+++++.+.
T Consensus 191 ~~~gvsKg~al~~l~~~~gi~~~~v~afGD~-~NDi~Ml~~ag~---~vAm~NA~~-~vK-----~~A~~vt~~n 255 (270)
T PRK10513 191 LDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQ-ENDIAMIEYAGV---GVAMGNAIP-SVK-----EVAQFVTKSN 255 (270)
T ss_pred eCCCCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHHhCCc---eEEecCccH-HHH-----HhcCeeccCC
Confidence 5568889999999999999999999999999 699999999994 444455444 444 2588888764
No 14
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.78 E-value=1.7e-18 Score=158.96 Aligned_cols=129 Identities=22% Similarity=0.212 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
|+.+.+.+..++..+...+|+||+...... ......+...++..+.+ .+.....||+|..+..+++.+|++|++++
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~-~~l~~~gl~~~F~~i~g---~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERELD-ILLKALGLADYFDVIVG---GDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHHHH-HHHHHhCCccccceEEc---CCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 666788888888766678999998874432 22233566666666666 33344589999999999999999988999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
||||+ .+||+||++||+.+|+|.||+...+.+.. ..||++++++.||.+++..
T Consensus 167 ~VGDs-~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~----~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 167 MVGDS-LNDILAAKAAGVPAVGVTWGYNSREELAQ----AGADVVIDSLAELLALLAE 219 (220)
T ss_pred EECCC-HHHHHHHHHcCCCEEEEECCCCCCcchhh----cCCCEEECCHHHHHHHHhc
Confidence 99999 69999999999999999999864455544 7899999999999988754
No 15
>PRK10976 putative hydrolase; Provisional
Probab=99.78 E-value=9.9e-18 Score=158.09 Aligned_cols=71 Identities=23% Similarity=0.328 Sum_probs=62.3
Q ss_pred CcEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccC
Q 016293 83 VETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRI 161 (392)
Q Consensus 83 ik~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~ 161 (392)
+|+|++||||||+++. .+.+.+.++|++++++|++++|+| ||+...+...++.++++.+ +||.||+.+
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~~~--------~I~~NGa~i 70 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFAT---GRHHVDVGQIRDNLEIKSY--------MITSNGARV 70 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc---CCChHHHHHHHHhcCCCCe--------EEEcCCcEE
Confidence 7999999999999864 467789999999999999999999 9999999999999998643 788888887
Q ss_pred CCC
Q 016293 162 PSP 164 (392)
Q Consensus 162 ~~~ 164 (392)
.++
T Consensus 71 ~~~ 73 (266)
T PRK10976 71 HDT 73 (266)
T ss_pred ECC
Confidence 654
No 16
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.78 E-value=5.3e-18 Score=158.85 Aligned_cols=127 Identities=16% Similarity=0.096 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccc-eeeecccCCCccccCCCcHHHHHHHHHHcCCC-CCc
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV-GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQ 330 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~-~~e 330 (392)
++.+.+.+..++......+|+||....... ......+...++ +.+... +....+||+|++|..+++++|+. |++
T Consensus 101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~-~~l~~~gl~~~f~d~ii~~---~~~~~~KP~p~~~~~a~~~l~~~~~~~ 176 (253)
T TIGR01422 101 IPGVIEVIAYLRARGIKIGSTTGYTREMMD-VVAPEAALQGYRPDYNVTT---DDVPAGRPAPWMALKNAIELGVYDVAA 176 (253)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCcHHHHH-HHHHHHHhcCCCCceEEcc---ccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence 445677777777655567888888753221 111122333332 333333 33345899999999999999995 999
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEecCCCC-----------------------hhhccCCCCCCCCcEEECChhhHHHh
Q 016293 331 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTS-----------------------LSMLQSPNNSIQPDFYTNKISDFLSL 387 (392)
Q Consensus 331 vi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~-----------------------~~~l~~~~~~~~pd~v~~sl~el~~~ 387 (392)
|++|||+ .+|+++|+++|+.+|+|.||... .+.+.. ..||++++++.||.++
T Consensus 177 ~l~IGDs-~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~v~~~~~el~~~ 251 (253)
T TIGR01422 177 CVKVGDT-VPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKA----AGAHYVIDTLAELPAV 251 (253)
T ss_pred eEEECCc-HHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHh----cCCCEehhcHHHHHHh
Confidence 9999999 59999999999999999999752 234433 6899999999999877
Q ss_pred H
Q 016293 388 K 388 (392)
Q Consensus 388 ~ 388 (392)
+
T Consensus 252 ~ 252 (253)
T TIGR01422 252 I 252 (253)
T ss_pred h
Confidence 5
No 17
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.78 E-value=2.3e-18 Score=157.21 Aligned_cols=128 Identities=24% Similarity=0.280 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++...-..+|+||..... ........+...+++.+.. .+....+||+|..|+.+++++|+++++|+
T Consensus 84 ~~g~~~~l~~L~~~g~~~~i~S~~~~~~-~~~~l~~~gl~~~f~~i~~---~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 84 YETVYETLKTLKKQGYKLGIVTTKMRDT-VEMGLKLTGLDEFFDVVIT---LDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHcCChhceeEEEe---cCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 4456677777776544567888886532 1222233344444544444 33344589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
+|||+ .+|+++|+++|+.+|+|.||....+.+.+ ..|+++++++.|+.+++.
T Consensus 160 ~iGDs-~~Di~aa~~aG~~~i~v~~g~~~~~~l~~----~~~~~~i~~~~~l~~~i~ 211 (214)
T PRK13288 160 MVGDN-HHDILAGKNAGTKTAGVAWTIKGREYLEQ----YKPDFMLDKMSDLLAIVG 211 (214)
T ss_pred EECCC-HHHHHHHHHCCCeEEEEcCCCCCHHHHhh----cCcCEEECCHHHHHHHHh
Confidence 99999 59999999999999999999876665543 579999999999998764
No 18
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.77 E-value=9.4e-18 Score=158.47 Aligned_cols=129 Identities=17% Similarity=0.094 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCcc-ceeeecccCCCccccCCCcHHHHHHHHHHcCCC-CCc
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM-VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQ 330 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~-~~e 330 (392)
++.+.+.+..|+......+|+||....... ......+...+ ++.+.+. +.....||+|++|..+++++|+. +++
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~~-~~l~~~~l~~~~~d~i~~~---~~~~~~KP~p~~~~~a~~~l~~~~~~e 178 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREMMD-VVVPLAAAQGYRPDHVVTT---DDVPAGRPYPWMALKNAIELGVYDVAA 178 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHHHH-HHHHHHhhcCCCceEEEcC---CcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence 445677777777655567888888763311 11111222222 2333333 33345899999999999999996 699
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEecCCCC-----------------------hhhccCCCCCCCCcEEECChhhHHHh
Q 016293 331 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTS-----------------------LSMLQSPNNSIQPDFYTNKISDFLSL 387 (392)
Q Consensus 331 vi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~-----------------------~~~l~~~~~~~~pd~v~~sl~el~~~ 387 (392)
|+||||+ .+|+++|+++|+.+|+|.+|.+. .+.+.+ ..|+++++++.||.++
T Consensus 179 ~l~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~a~~vi~~~~~l~~~ 253 (267)
T PRK13478 179 CVKVDDT-VPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRA----AGAHYVIDTIADLPAV 253 (267)
T ss_pred eEEEcCc-HHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHH----cCCCeehhhHHHHHHH
Confidence 9999999 59999999999999999998763 133433 6899999999999987
Q ss_pred HHh
Q 016293 388 KAA 390 (392)
Q Consensus 388 ~~~ 390 (392)
+..
T Consensus 254 l~~ 256 (267)
T PRK13478 254 IAD 256 (267)
T ss_pred HHH
Confidence 754
No 19
>PRK06769 hypothetical protein; Validated
Probab=99.76 E-value=1.4e-17 Score=147.16 Aligned_cols=78 Identities=28% Similarity=0.383 Sum_probs=65.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhc--cCCCCCCCCcEEECChhhHHHh
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML--QSPNNSIQPDFYTNKISDFLSL 387 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l--~~~~~~~~pd~v~~sl~el~~~ 387 (392)
.||+|.+|+.+++++|++|++|+||||+ .+|+.+|+++|+.+|+|.+|.+..+.. .+......|+++++++.||+++
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD~-~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~ 170 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGDR-WTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNW 170 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcCC-HHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHH
Confidence 7999999999999999999999999999 599999999999999999987542100 0001125799999999999987
Q ss_pred H
Q 016293 388 K 388 (392)
Q Consensus 388 ~ 388 (392)
+
T Consensus 171 l 171 (173)
T PRK06769 171 I 171 (173)
T ss_pred H
Confidence 6
No 20
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.76 E-value=2.6e-18 Score=162.71 Aligned_cols=73 Identities=23% Similarity=0.258 Sum_probs=63.5
Q ss_pred cCcEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 82 SVETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
++|+|++||||||++.. .+.+.++++|++|+++|++++++| ||+...+...++.+++..+ +||.||+.
T Consensus 1 m~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~~~--------~I~~NGa~ 69 (272)
T PRK15126 1 MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFAT---GRHVLEMQHILGALSLDAY--------LITGNGTR 69 (272)
T ss_pred CccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHcCCCCc--------EEecCCcE
Confidence 48999999999999854 566789999999999999999999 9999999999999998643 78889988
Q ss_pred CCCCC
Q 016293 161 IPSPN 165 (392)
Q Consensus 161 ~~~~~ 165 (392)
+.++.
T Consensus 70 I~~~~ 74 (272)
T PRK15126 70 VHSLE 74 (272)
T ss_pred EEcCC
Confidence 87643
No 21
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.76 E-value=1.4e-17 Score=153.47 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=62.4
Q ss_pred cCcEEEEEccCceecCCe-eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 82 SVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~-~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
++|+|+||+||||+++.. +.+.+.++|++++++|++++++| ||+...+...++.+++..+ +|+.||+.
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~~~--------~i~~nGa~ 70 (230)
T PRK01158 2 KIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILAT---GNVLCFARAAAKLIGTSGP--------VIAENGGV 70 (230)
T ss_pred ceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEc---CCchHHHHHHHHHhCCCCc--------EEEecCeE
Confidence 489999999999998655 56789999999999999999999 9999999998888998644 78888887
Q ss_pred CCCC
Q 016293 161 IPSP 164 (392)
Q Consensus 161 ~~~~ 164 (392)
+..+
T Consensus 71 i~~~ 74 (230)
T PRK01158 71 ISVG 74 (230)
T ss_pred EEEc
Confidence 7654
No 22
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.76 E-value=1.7e-17 Score=153.23 Aligned_cols=128 Identities=17% Similarity=0.146 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++......+|+||....... ......+....++.+.. .+....+||+|++|+.+++++|++|++|+
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~-~~l~~~~l~~~f~~i~~---~~~~~~~KP~p~~~~~~~~~l~~~p~~~l 172 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYLAR-LILPQLGWEQRCAVLIG---GDTLAERKPHPLPLLVAAERIGVAPTDCV 172 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHHHH-HHHHHcCchhcccEEEe---cCcCCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 445666677777655556788887653211 11122233333333333 22233589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCCh-hhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSL-SMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~-~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
||||+ .+|+++|+++|+.+|+|.+|.... +.+.+ ..|+++++++.||.+++.
T Consensus 173 ~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~----~~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 173 YVGDD-ERDILAARAAGMPSVAALWGYRLHDDDPLA----WQADVLVEQPQLLWNPAT 225 (229)
T ss_pred EeCCC-HHHHHHHHHCCCcEEEEeecCCCCCcChhh----cCCCeeeCCHHHHHHHhc
Confidence 99999 699999999999999999998533 22222 579999999999988753
No 23
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.76 E-value=7.7e-18 Score=157.38 Aligned_cols=121 Identities=15% Similarity=0.063 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+|+||...... .......+...+++.+....... .+||+|+.|+.+++++|++|++|+
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~-~~~l~~~gl~~~Fd~iv~~~~~~---~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPRENA-ELMISLLGLSDFFQAVIIGSECE---HAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHHH-HHHHHHcCChhhCcEEEecCcCC---CCCCChHHHHHHHHHhCCChhHEE
Confidence 45567777788766566789999876432 22223345555555555544443 489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhh
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD 383 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~e 383 (392)
+|||+ ..|+++|+++|+++|+|.||. ..+.+.. ..|+++++++.|
T Consensus 186 ~vgDs-~~Di~aA~~aGi~~i~v~~g~-~~~~l~~----~~a~~vi~~~~e 230 (248)
T PLN02770 186 VFEDS-VSGIKAGVAAGMPVVGLTTRN-PESLLME----AKPTFLIKDYED 230 (248)
T ss_pred EEcCC-HHHHHHHHHCCCEEEEEeCCC-CHHHHhh----cCCCEEeccchh
Confidence 99999 599999999999999999985 3344432 579999999998
No 24
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.76 E-value=1.5e-17 Score=152.31 Aligned_cols=127 Identities=20% Similarity=0.191 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCC--ccceeeecccCCCccccCCCcHHHHHHHHHHcCCC-CC
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGG--SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KS 329 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~-~~ 329 (392)
++.+.+.+..++..+....|+||....... ......+.. .++..+.+.... ..+||+|++|+.+++++|++ |+
T Consensus 89 ~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~-~~l~~~~l~~~~~f~~i~~~~~~---~~~KP~p~~~~~a~~~~~~~~~~ 164 (220)
T TIGR03351 89 LPGAEEAFRSLRSSGIKVALTTGFDRDTAE-RLLEKLGWTVGDDVDAVVCPSDV---AAGRPAPDLILRAMELTGVQDVQ 164 (220)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHHH-HHHHHhhhhhhccCCEEEcCCcC---CCCCCCHHHHHHHHHHcCCCChh
Confidence 445677777777655557888888763321 122223333 445555444333 34899999999999999997 79
Q ss_pred cEEEEcCCchhhHHHHHHcCCeE-EEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 330 QICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 330 evi~IGD~l~nDI~ma~~aG~~~-i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
+|++|||+ .+|+++|+++|+.+ |++.+|....+.+.. ..|+++++++.+|.+++
T Consensus 165 ~~~~igD~-~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~----~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 165 SVAVAGDT-PNDLEAGINAGAGAVVGVLTGAHDAEELSR----HPHTHVLDSVADLPALL 219 (220)
T ss_pred HeEEeCCC-HHHHHHHHHCCCCeEEEEecCCCcHHHHhh----cCCceeecCHHHHHHhh
Confidence 99999999 59999999999999 999998877666654 67999999999998764
No 25
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.75 E-value=3.9e-17 Score=153.90 Aligned_cols=72 Identities=25% Similarity=0.358 Sum_probs=65.0
Q ss_pred cCcEEEEEccCceecCCe-eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 82 SVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~-~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
++|+|+|||||||++++. +.+.++++|++++++|++++|+| ||+...+...++.+++..+ +||.||+.
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaT---GR~~~~~~~~~~~l~~~~~--------~I~~NGa~ 70 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLAT---GRPLPDVLSILEELGLDGP--------LITFNGAL 70 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEEC---CCChHHHHHHHHHcCCCcc--------EEEeCCeE
Confidence 689999999999998555 66689999999999999999999 9999999999999999754 88899998
Q ss_pred CCCC
Q 016293 161 IPSP 164 (392)
Q Consensus 161 ~~~~ 164 (392)
+..+
T Consensus 71 i~~~ 74 (264)
T COG0561 71 IYNG 74 (264)
T ss_pred EecC
Confidence 8887
No 26
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.75 E-value=4.7e-18 Score=155.63 Aligned_cols=126 Identities=27% Similarity=0.304 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+|+||...... .......+...+++.+....... ..||+|.+|+.+++++|+++++|+
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~-~~~l~~~~l~~~f~~i~~~~~~~---~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVKQ-WEKLERLGVRDFFDAVITSEEEG---VEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHH-HHHHHhCChHHhccEEEEeccCC---CCCCCHHHHHHHHHHcCCChhhEE
Confidence 45567778888765556789999875322 12222334444555554443333 489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 385 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~ 385 (392)
+|||++.+|+.+|+++|+.+|+|.++........ ....|+++++++.||+
T Consensus 172 ~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~---~~~~~~~~i~~~~el~ 221 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDD---VYPYPDYEISSLRELL 221 (221)
T ss_pred EECCChHHHHHHHHHCCCEEEEECCCCCcccccc---cccCCCeeeCcHHhhC
Confidence 9999944899999999999999999875432211 1246899999998874
No 27
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.74 E-value=1.3e-17 Score=151.25 Aligned_cols=128 Identities=22% Similarity=0.214 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++...+.+..++..+...+|+||....... ......+...+++.+... +....+||+|.+|+.+++++|+++++|+
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~-~~l~~~~l~~~f~~i~~~---~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRAR-SLLEALGLLPLFDHVIGS---DEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHHcCChhheeeEEec---CcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 455677777787665668899987654321 112233444344444333 3334589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
||||+ .+|+++|+++|+.+|++.||.+..+.+.+ ..|+++++++.+|.+++.
T Consensus 153 ~igD~-~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~----~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 153 MVGDA-VTDLASARAAGTATVAALWGEGDAGELLA----ARPDFLLRKPQSLLALCR 204 (205)
T ss_pred EEcCC-HHHHHHHHHcCCeEEEEEecCCChhhhhh----cCCCeeeCCHHHHHHHhh
Confidence 99999 59999999999999999999987777654 579999999999998764
No 28
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.74 E-value=4.2e-17 Score=153.15 Aligned_cols=124 Identities=16% Similarity=0.217 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++......+|+||...... .......+...++..+...... ..+||+|++|+.+++++|+++++|+
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~-~~~l~~~gl~~~Fd~ii~~~d~---~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYL-ERAIEAVGMEGFFSVVLAAEDV---YRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHH-HHHHHHcCCHhhCcEEEecccC---CCCCCCHHHHHHHHHHhCCChHHeE
Confidence 45567777788765556789999875332 2222233455555555554333 3589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
||||+ .+|+++|+++|+.+|+|. |......+. .|+++++++.||..+.
T Consensus 187 ~IgDs-~~Di~aA~~aG~~~i~v~-g~~~~~~l~------~ad~vi~~~~el~~~~ 234 (260)
T PLN03243 187 VFGNS-NSSVEAAHDGCMKCVAVA-GKHPVYELS------AGDLVVRRLDDLSVVD 234 (260)
T ss_pred EEcCC-HHHHHHHHHcCCEEEEEe-cCCchhhhc------cCCEEeCCHHHHHHHH
Confidence 99999 699999999999999996 555444432 4899999999997654
No 29
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.73 E-value=1.8e-16 Score=141.02 Aligned_cols=76 Identities=20% Similarity=0.260 Sum_probs=65.8
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCC--cEEECChhhHHH
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP--DFYTNKISDFLS 386 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~p--d~v~~sl~el~~ 386 (392)
.+||+|.+|..+++++|+++++|+||||+ .+|+.+|+++|+.+|++.+|........ ..| +++++++.++.+
T Consensus 101 ~~KP~p~~~~~~~~~l~~~~~~~~~VgDs-~~Di~~A~~aG~~~i~v~~g~~~~~~~~-----~~~~~~~ii~~l~el~~ 174 (181)
T PRK08942 101 CRKPKPGMLLSIAERLNIDLAGSPMVGDS-LRDLQAAAAAGVTPVLVRTGKGVTTLAE-----GAAPGTWVLDSLADLPQ 174 (181)
T ss_pred CCCCCHHHHHHHHHHcCCChhhEEEEeCC-HHHHHHHHHCCCeEEEEcCCCCchhhhc-----ccCCCceeecCHHHHHH
Confidence 38999999999999999999999999999 5999999999999999999875433222 345 999999999998
Q ss_pred hHHh
Q 016293 387 LKAA 390 (392)
Q Consensus 387 ~~~~ 390 (392)
++.+
T Consensus 175 ~l~~ 178 (181)
T PRK08942 175 ALKK 178 (181)
T ss_pred HHHh
Confidence 7754
No 30
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=99.73 E-value=2.7e-17 Score=131.94 Aligned_cols=100 Identities=52% Similarity=0.888 Sum_probs=88.9
Q ss_pred EEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCC
Q 016293 86 FIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPN 165 (392)
Q Consensus 86 vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~ 165 (392)
|+||+|||||++..++|++.++|++|+++|++++++||++++++.++.+.|+.+|++..
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~--------------------- 59 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVD--------------------- 59 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-----------------------
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCC---------------------
Confidence 68999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCC
Q 016293 166 SSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGF 213 (392)
Q Consensus 166 ~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~ 213 (392)
.++++++...+..++++. ....++|+.|++.+.+++++.|+
T Consensus 60 -----~~~i~ts~~~~~~~l~~~--~~~~~v~vlG~~~l~~~l~~~G~ 100 (101)
T PF13344_consen 60 -----EDEIITSGMAAAEYLKEH--KGGKKVYVLGSDGLREELREAGF 100 (101)
T ss_dssp -----GGGEEEHHHHHHHHHHHH--TTSSEEEEES-HHHHHHHHHTTE
T ss_pred -----cCEEEChHHHHHHHHHhc--CCCCEEEEEcCHHHHHHHHHcCC
Confidence 799999999999999986 35689999999999999999885
No 31
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.73 E-value=3.2e-17 Score=149.17 Aligned_cols=127 Identities=20% Similarity=0.298 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+|+||...... .......+...+++.+.. .+....+||+|++|..+++++|+++++|+
T Consensus 87 ~~g~~~~L~~l~~~g~~~~i~S~~~~~~~-~~~l~~~~l~~~f~~~~~---~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 87 FPGVEATLGALRAKGLRLGLVTNKPTPLA-RPLLELLGLAKYFSVLIG---GDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHcCcHhhCcEEEe---cCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 45567777777765556788888765322 122222333334444433 33344589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
+|||+ .+|+++|+++|+.+|+|.||....+.+.. ..|+++++++.||..++
T Consensus 163 ~igDs-~~d~~aa~~aG~~~i~v~~g~~~~~~l~~----~~a~~~i~~~~~l~~~~ 213 (213)
T TIGR01449 163 YVGDS-RVDIQAARAAGCPSVLLTYGYRYGEAIDL----LPPDVLYDSLNELPPLL 213 (213)
T ss_pred EeCCC-HHHHHHHHHCCCeEEEEccCCCCCcchhh----cCCCeEeCCHHHHHhhC
Confidence 99999 69999999999999999998876555443 56999999999998753
No 32
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.73 E-value=1.2e-16 Score=151.31 Aligned_cols=74 Identities=16% Similarity=0.136 Sum_probs=63.4
Q ss_pred hcCcEEEEEccCceecCCeeC-CCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccc
Q 016293 81 DSVETFIFDCDGVIWKGDKLI-DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFH 159 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~~~~-~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~ 159 (392)
..+++|++||||||++++... +.++++|++|+++|++++++| ||+...+..+++.+|++.. ++|+.||+
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaT---GR~~~~i~~~~~~l~~~~~-------~~I~~NGa 74 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCS---SKTAAEMLPLQQTLGLQGL-------PLIAENGA 74 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEc---CCCHHHHHHHHHHhCCCCC-------cEEEeCCC
Confidence 468999999999999976654 679999999999999999999 9999999999999998522 37888888
Q ss_pred cCCCC
Q 016293 160 RIPSP 164 (392)
Q Consensus 160 ~~~~~ 164 (392)
.+..+
T Consensus 75 ~I~~~ 79 (271)
T PRK03669 75 VIQLD 79 (271)
T ss_pred EEEec
Confidence 77654
No 33
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.73 E-value=1e-16 Score=141.98 Aligned_cols=71 Identities=27% Similarity=0.303 Sum_probs=62.1
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeE-EEEecCCCChhhccCCCCCCCCcEEECChhhHH
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 385 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~-i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~ 385 (392)
.+||+|.+|..+++++|+++++|+||||+ .+||++|+++|+.+ ++|.+|....... ...|+++++++.||.
T Consensus 104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs-~~Di~aA~~aG~~~~i~v~~g~~~~~~~-----~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 104 CRKPKPGMLLQARKELHIDMAQSYMVGDK-LEDMQAGVAAKVKTNVLVRTGKPITPEA-----ENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCHHHHHHHHHHcCcChhhEEEEcCC-HHHHHHHHHCCCcEEEEEecCCcccccc-----cccCCEEeccHHHhh
Confidence 38999999999999999999999999999 69999999999998 8999986532222 146999999999986
No 34
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.73 E-value=2.3e-17 Score=153.18 Aligned_cols=124 Identities=20% Similarity=0.194 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..|+.. ...+|+||..... ...+...+++.+..+.... ..||+|.+|+.+++++|++|++|+
T Consensus 115 ~~gv~~~L~~L~~~-~~l~i~Tn~~~~~------~~~gl~~~fd~i~~~~~~~---~~KP~p~~~~~a~~~~~~~~~~~~ 184 (238)
T PRK10748 115 PQATHDTLKQLAKK-WPLVAITNGNAQP------ELFGLGDYFEFVLRAGPHG---RSKPFSDMYHLAAEKLNVPIGEIL 184 (238)
T ss_pred CccHHHHHHHHHcC-CCEEEEECCCchH------HHCCcHHhhceeEecccCC---cCCCcHHHHHHHHHHcCCChhHEE
Confidence 45677788888764 6788999976531 2345555555555443333 589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
||||++..||.+|+++|+.+|+|..+.... .........|++.+.+|.||.+++
T Consensus 185 ~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~--~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQACWINPENGDL--MQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred EEcCCcHHHHHHHHHCCCeEEEEcCCCccc--cccccccCCCCEEECCHHHHHhhC
Confidence 999995599999999999999998754321 111122357999999999998763
No 35
>PLN02887 hydrolase family protein
Probab=99.72 E-value=4.3e-17 Score=167.50 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=65.6
Q ss_pred HHHHhhcCcEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecccccc----
Q 016293 76 ADELIDSVETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSF---- 150 (392)
Q Consensus 76 ~~~~~~~ik~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f---- 150 (392)
++.+-.+||+|+|||||||++++ .+.+.++++|++++++|++++|+| ||+...+...++.+++... +.|
T Consensus 301 ~~~~~~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIAT---GR~~~~i~~~l~~L~l~~~---~~~I~~~ 374 (580)
T PLN02887 301 LRFYKPKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIAT---GKARPAVIDILKMVDLAGK---DGIISES 374 (580)
T ss_pred hhhhccCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHhCcccc---cceEeec
Confidence 34445689999999999999865 467789999999999999999999 9999999999998887521 001
Q ss_pred ceeeecccccCCC
Q 016293 151 LSIVCLKFHRIPS 163 (392)
Q Consensus 151 ~~~i~~~~~~~~~ 163 (392)
.++|++||+.+.+
T Consensus 375 ~p~I~~NGA~I~d 387 (580)
T PLN02887 375 SPGVFLQGLLVYG 387 (580)
T ss_pred ccEEeecCeEEEE
Confidence 1466778888764
No 36
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.72 E-value=4.6e-17 Score=154.13 Aligned_cols=128 Identities=17% Similarity=0.209 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+|+||...... .......+...+++.+.+. +....+||+|.+|+.+++++|+++++|+
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~-~~~l~~~~i~~~f~~i~~~---d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERFV-APLLDQMKIGRYFRWIIGG---DTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHHH-HHHHHHcCcHhhCeEEEec---CCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 45567777777765556788888765321 1111122334444444333 3334589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
+|||+ .+||++|+++|+.+++|.+|+...+.+.+ ..|+++++++.+|.+++.
T Consensus 179 ~IGD~-~~Di~aA~~aGi~~i~v~~G~~~~~~l~~----~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 179 FVGDS-RSDVLAAKAAGVQCVALSYGYNHGRPIAE----ESPALVIDDLRALLPGCA 230 (272)
T ss_pred EECCC-HHHHHHHHHCCCeEEEEecCCCCchhhhh----cCCCEEECCHHHHHHHHh
Confidence 99999 69999999999999999999876655543 579999999999997654
No 37
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.71 E-value=5e-17 Score=149.23 Aligned_cols=124 Identities=10% Similarity=0.028 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..+++.....+|+||....... ......+...+++.+... +....+||+|++|+.+++++|++|++|+
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~-~~l~~~~l~~~f~~~~~~---~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 94 LPGVREALALCKAQGLKIGLASASPLHMLE-AVLTMFDLRDYFDALASA---EKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCcHHHHH-HHHHhCcchhcccEEEEc---ccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 556778888888766667888887653321 222233444455554443 3344699999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS 386 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~ 386 (392)
+|||+ .+|+++|+++|+++|++.++....+... ..++++++++.||..
T Consensus 170 ~igDs-~~Di~aA~~aG~~~i~v~~~~~~~~~~~-----~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 170 ALEDS-FNGMIAAKAARMRSIVVPAPEQQNDPRW-----ALADVKLESLTELTA 217 (222)
T ss_pred EEcCC-hhhHHHHHHcCCEEEEecCCccCchhhh-----hhhheeccCHHHHhh
Confidence 99999 5999999999999999998765433322 358999999999865
No 38
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.71 E-value=2.6e-16 Score=150.01 Aligned_cols=125 Identities=11% Similarity=0.009 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+-..+|+||............. ....++..+... ..+.....||+|++|..+++++|++|++|+
T Consensus 146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~-~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 146 RPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL-LGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred hhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-ccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 556777777777655567888987653221111111 101112211111 222234589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS 386 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~ 386 (392)
+|||+ .+|+++|+++|+.+|+|.+|....+.+ ..++++++++.++..
T Consensus 224 ~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~l------~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 224 VVEDS-VIGLQAAKAAGMRCIVTKSSYTADEDF------SGADAVFDCLGDVPL 270 (286)
T ss_pred EEeCC-HHhHHHHHHcCCEEEEEccCCcccccc------CCCcEEECChhhcch
Confidence 99999 599999999999999999988765544 258999999998853
No 39
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.70 E-value=4.9e-16 Score=142.60 Aligned_cols=130 Identities=20% Similarity=0.251 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+++||....... ......+...++..+. ..+.....||+|.+++.+++++++++++|+
T Consensus 95 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~-~~l~~~~l~~~f~~~~---~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 95 YPGVKETLAALKAAGYPLAVVTNKPTPFVA-PLLEALGIADYFSVVI---GGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHcCCccCccEEE---cCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 445667777777655557788887653321 1112223333333333 333344589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHhh
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA 391 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~~ 391 (392)
+|||+ .+|+++|+++|+.+|+|.+|......+.. ..|+++++++.+|..++.+.
T Consensus 171 ~igD~-~~Di~~a~~~g~~~i~v~~g~~~~~~~~~----~~~~~~i~~~~~l~~~l~~~ 224 (226)
T PRK13222 171 FVGDS-RNDIQAARAAGCPSVGVTYGYNYGEPIAL----SEPDVVIDHFAELLPLLGLA 224 (226)
T ss_pred EECCC-HHHHHHHHHCCCcEEEECcCCCCccchhh----cCCCEEECCHHHHHHHHHHh
Confidence 99999 59999999999999999998765444432 57999999999999987654
No 40
>PRK11587 putative phosphatase; Provisional
Probab=99.70 E-value=1.4e-16 Score=145.84 Aligned_cols=120 Identities=18% Similarity=0.138 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..+++.+...+|+||...... .......+.. .+..+.. .+.....||+|.+|..+++++|++|++|+
T Consensus 85 ~pg~~e~L~~L~~~g~~~~ivTn~~~~~~-~~~l~~~~l~-~~~~i~~---~~~~~~~KP~p~~~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 85 LPGAIALLNHLNKLGIPWAIVTSGSVPVA-SARHKAAGLP-APEVFVT---AERVKRGKPEPDAYLLGAQLLGLAPQECV 159 (218)
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCCCchHH-HHHHHhcCCC-CccEEEE---HHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence 55667777788766566788898765321 1111122222 1222222 22333589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 385 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~ 385 (392)
+|||+ .+|+++|+++|+.+|+|.++... ... ..|+++++++.||.
T Consensus 160 ~igDs-~~di~aA~~aG~~~i~v~~~~~~-~~~------~~~~~~~~~~~el~ 204 (218)
T PRK11587 160 VVEDA-PAGVLSGLAAGCHVIAVNAPADT-PRL------DEVDLVLHSLEQLT 204 (218)
T ss_pred EEecc-hhhhHHHHHCCCEEEEECCCCch-hhh------ccCCEEecchhhee
Confidence 99999 59999999999999999887532 222 35899999999874
No 41
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.70 E-value=6.5e-17 Score=152.87 Aligned_cols=127 Identities=19% Similarity=0.179 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..|+...-...|+||...... .......+...+++.+.. .+. .++++..++.+++++++++++|+
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~-~~~L~~~gl~~~F~~vi~---~~~---~~~k~~~~~~~l~~~~~~p~~~l 216 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSNSRQNI-EAFLQRQGLRSLFSVVQA---GTP---ILSKRRALSQLVAREGWQPAAVM 216 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHcCChhheEEEEe---cCC---CCCCHHHHHHHHHHhCcChhHEE
Confidence 45567777777765445778888876332 222223344444444322 122 24567899999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHhh
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA 391 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~~ 391 (392)
+|||+ .+|+++|+++|+.+|+|.+|....+.+.+ ..|+++++++.||++++.++
T Consensus 217 ~IGDs-~~Di~aA~~AG~~~I~v~~g~~~~~~l~~----~~ad~~i~~~~eL~~~~~~~ 270 (273)
T PRK13225 217 YVGDE-TRDVEAARQVGLIAVAVTWGFNDRQSLVA----ACPDWLLETPSDLLQAVTQL 270 (273)
T ss_pred EECCC-HHHHHHHHHCCCeEEEEecCCCCHHHHHH----CCCCEEECCHHHHHHHHHHH
Confidence 99999 59999999999999999999877666654 57999999999999988765
No 42
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.70 E-value=3.8e-16 Score=152.39 Aligned_cols=121 Identities=16% Similarity=0.136 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+|+||..... ........++..+++.+....... .+||+|++|+.+++++|++|++|+
T Consensus 218 ~pGa~ElL~~Lk~~GiklaIaSn~~~~~-~~~~L~~lgL~~yFd~Iv~sddv~---~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 218 RTGSQEFVNVLMNYKIPMALVSTRPRKT-LENAIGSIGIRGFFSVIVAAEDVY---RGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHcCCHHHceEEEecCcCC---CCCCCHHHHHHHHHHcCCCcccEE
Confidence 4556777888877666678999988633 222233445555666665544443 489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 385 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~ 385 (392)
||||+ ..||++|+++|+.+|+|.++. ....+ ..++++++++.||.
T Consensus 294 ~IGDS-~~DIeAAk~AGm~~IgV~~~~-~~~~l------~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 294 VFGNS-NQTVEAAHDARMKCVAVASKH-PIYEL------GAADLVVRRLDELS 338 (381)
T ss_pred EEcCC-HHHHHHHHHcCCEEEEECCCC-ChhHh------cCCCEEECCHHHHH
Confidence 99999 599999999999999998764 22332 24899999999984
No 43
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.70 E-value=7.3e-17 Score=148.15 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=58.3
Q ss_pred EEEEccCceecCCe-eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCC
Q 016293 86 FIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSP 164 (392)
Q Consensus 86 vifDlDGTL~d~~~-~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~ 164 (392)
|+|||||||+++.. +.+.+.++|++++++|++++++| ||+...+..+++.+|+.. ++|+.||+.+...
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aT---GR~~~~~~~~~~~l~~~~--------~~i~~nGa~i~~~ 69 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVT---GNSVQFARALAKLIGTPD--------PVIAENGGEISYN 69 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEc---CCchHHHHHHHHHhCCCC--------eEEEecCcEEEeC
Confidence 58999999999755 56689999999999999999999 999999999999898643 3788888877653
No 44
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.69 E-value=1.2e-15 Score=143.02 Aligned_cols=69 Identities=23% Similarity=0.368 Sum_probs=59.6
Q ss_pred EEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCC
Q 016293 85 TFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPS 163 (392)
Q Consensus 85 ~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~ 163 (392)
+|+|||||||++.. .+.+++.++|++++++|++++++| ||+...+...++.+++..+ +|+.||+.+..
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaT---GR~~~~~~~~~~~~~~~~~--------~I~~NGa~i~~ 69 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLAT---GRPYKEVKNILKELGLDTP--------FITANGAAVID 69 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEe---CCCHHHHHHHHHHcCCCCC--------EEEcCCcEEEC
Confidence 48999999999864 466789999999999999999999 8999999999998888533 78888888776
Q ss_pred C
Q 016293 164 P 164 (392)
Q Consensus 164 ~ 164 (392)
.
T Consensus 70 ~ 70 (256)
T TIGR00099 70 D 70 (256)
T ss_pred C
Confidence 5
No 45
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.69 E-value=5.6e-16 Score=141.94 Aligned_cols=125 Identities=19% Similarity=0.235 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHc-CCCCCcE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKF-GIQKSQI 331 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~l-gv~~~ev 331 (392)
++...+.+..++.. ...+|+||...... .......+...+++.+..+.... ..||+|.+|+.+++++ |++|++|
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~-~~~l~~~~l~~~fd~i~~~~~~~---~~KP~~~~~~~~~~~~~~~~~~~~ 173 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQ-YKRLRKSGLFPFFDDIFVSEDAG---IQKPDKEIFNYALERMPKFSKEEV 173 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHH-HHHHHHCCcHhhcCEEEEcCccC---CCCCCHHHHHHHHHHhcCCCchhe
Confidence 44566777788776 77889998765322 22233445555666665544433 4899999999999999 9999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 332 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 332 i~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
++|||++.+|+++|+++|+.+|++.++..... . ...|+++++++.||.+++
T Consensus 174 v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~--~----~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 174 LMIGDSLTADIKGGQNAGLDTCWMNPDMHPNP--D----DIIPTYEIRSLEELYEIL 224 (224)
T ss_pred EEECCCcHHHHHHHHHCCCcEEEECCCCCCCC--C----CCCCceEECCHHHHHhhC
Confidence 99999943799999999999999998754321 1 256899999999998764
No 46
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.69 E-value=1e-16 Score=147.19 Aligned_cols=131 Identities=16% Similarity=0.128 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
.+.+.+.+..|+..+-..+++|+..... ....+...++..++..+.+..... .+||+|+.|..++++||+.|++|+
T Consensus 88 ~pGv~~~l~~L~~~~i~~avaS~s~~~~-~~~~L~~~gl~~~f~~~v~~~dv~---~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 88 IPGVVELLEQLKARGIPLAVASSSPRRA-AERVLARLGLLDYFDVIVTADDVA---RGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CccHHHHHHHHHhcCCcEEEecCChHHH-HHHHHHHccChhhcchhccHHHHh---cCCCCCHHHHHHHHHcCCChHHeE
Confidence 3446666777776544456667665422 112222334444455544444333 479999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
+|+|+ .++|++|++|||++|.|..+.... .+. .......+....++.++...+.+
T Consensus 164 viEDs-~~Gi~Aa~aAGm~vv~v~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~~~~~ 218 (221)
T COG0637 164 VVEDS-PAGIQAAKAAGMRVVGVPAGHDRP-HLD-PLDAHGADTVLLDLAELPALLEA 218 (221)
T ss_pred EEecc-hhHHHHHHHCCCEEEEecCCCCcc-ccc-hhhhhhcchhhccHHHHHHHHHh
Confidence 99999 599999999999999999844321 111 11225678888888888766543
No 47
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.68 E-value=5.3e-16 Score=142.26 Aligned_cols=71 Identities=18% Similarity=0.157 Sum_probs=60.9
Q ss_pred EEEEEccCceecCCe-eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCC
Q 016293 85 TFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPS 163 (392)
Q Consensus 85 ~vifDlDGTL~d~~~-~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~ 163 (392)
+|++||||||++++. ..+.+.++|++|+++|++++++| ||+...+...++.+++... ++||.||+.+..
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~T---gR~~~~~~~~~~~l~~~~~-------~~I~~NGa~i~~ 70 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCT---SKTAAEVEYLQKALGLTGD-------PYIAENGAAIHL 70 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcCCCCC-------cEEEeCCcEEEc
Confidence 489999999999765 55669999999999999999999 8999999999999998522 489999998876
Q ss_pred CC
Q 016293 164 PN 165 (392)
Q Consensus 164 ~~ 165 (392)
+.
T Consensus 71 ~~ 72 (221)
T TIGR02463 71 EE 72 (221)
T ss_pred Cc
Confidence 53
No 48
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.68 E-value=5.3e-16 Score=141.75 Aligned_cols=71 Identities=15% Similarity=0.111 Sum_probs=61.6
Q ss_pred CcEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccC
Q 016293 83 VETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRI 161 (392)
Q Consensus 83 ik~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~ 161 (392)
||+|++||||||++.. .+.+.+.++|++|+++|++++++| ||+...+..+++.+++..+ +|+.||+.+
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~T---GR~~~~~~~~~~~l~~~~~--------~i~~NGa~i 69 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVT---GNTVPFARALAVLIGTSGP--------VVAENGGVI 69 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEc---CCcchhHHHHHHHhCCCCc--------EEEccCcEE
Confidence 5899999999999854 467789999999999999999999 8999999998888887543 788888887
Q ss_pred CCC
Q 016293 162 PSP 164 (392)
Q Consensus 162 ~~~ 164 (392)
..+
T Consensus 70 ~~~ 72 (215)
T TIGR01487 70 FYN 72 (215)
T ss_pred EeC
Confidence 764
No 49
>PLN02940 riboflavin kinase
Probab=99.68 E-value=2.6e-16 Score=155.63 Aligned_cols=124 Identities=15% Similarity=0.139 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++......+|+||..............+...+++.+.+.... ..+||+|++|..+++++|++|++|+
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v---~~~KP~p~~~~~a~~~lgv~p~~~l 171 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV---EKGKPSPDIFLEAAKRLNVEPSNCL 171 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc---CCCCCCHHHHHHHHHHcCCChhHEE
Confidence 4456677777776555678999987533211111123444445555444333 3589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS 386 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~ 386 (392)
+|||+ ..|+++|+++|+.+|+|.++....... ..|+++++++.|+..
T Consensus 172 ~VGDs-~~Di~aA~~aGi~~I~v~~g~~~~~~~------~~ad~~i~sl~el~~ 218 (382)
T PLN02940 172 VIEDS-LPGVMAGKAAGMEVIAVPSIPKQTHLY------SSADEVINSLLDLQP 218 (382)
T ss_pred EEeCC-HHHHHHHHHcCCEEEEECCCCcchhhc------cCccEEeCCHhHcCH
Confidence 99999 599999999999999999976433221 468999999998753
No 50
>PRK09449 dUMP phosphatase; Provisional
Probab=99.67 E-value=1.8e-15 Score=138.97 Aligned_cols=126 Identities=25% Similarity=0.252 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCC-CCcE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQI 331 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~-~~ev 331 (392)
++.+.+.+..|+. ....+|+||...... .......+...+++.+..+.... ..||+|.+|+.+++++|+. +++|
T Consensus 97 ~~g~~~~L~~L~~-~~~~~i~Tn~~~~~~-~~~l~~~~l~~~fd~v~~~~~~~---~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 97 LPGAVELLNALRG-KVKMGIITNGFTELQ-QVRLERTGLRDYFDLLVISEQVG---VAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred CccHHHHHHHHHh-CCeEEEEeCCcHHHH-HHHHHhCChHHHcCEEEEECccC---CCCCCHHHHHHHHHHcCCCCcccE
Confidence 4556777777773 456789999765321 12222334444556555544333 4899999999999999985 5899
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 332 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 332 i~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
++|||++.+|+++|+++|+.+|++.++... ... ...|+++++++.||.++++
T Consensus 172 ~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~--~~~----~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 172 LMVGDNLHSDILGGINAGIDTCWLNAHGRE--QPE----GIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred EEEcCCcHHHHHHHHHCCCcEEEECCCCCC--CCC----CCCCeEEECCHHHHHHHHh
Confidence 999999536999999999999999854211 111 1468999999999998765
No 51
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.66 E-value=1.4e-16 Score=146.05 Aligned_cols=122 Identities=10% Similarity=0.030 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccce-eeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 254 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG-AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 254 ~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
+.+...+..++ ...+|+||..... ........+...++. .+....... ..||+|++|+.+++++|++|++|+
T Consensus 91 ~gv~~~L~~L~---~~~~ivTn~~~~~-~~~~l~~~~l~~~F~~~v~~~~~~~---~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 91 AGANALLESIT---VPMCVVSNGPVSK-MQHSLGKTGMLHYFPDKLFSGYDIQ---RWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCHHHHHHHcC---CCEEEEeCCcHHH-HHHHHHhcChHHhCcceEeeHHhcC---CCCCChHHHHHHHHHcCCCHHHeE
Confidence 34555555552 4578889987532 122222334444443 233322222 489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
+|||+ .+||++|+++|+.+|++.++....+ .. ..++.+++++.||.+.+.
T Consensus 164 ~igDs-~~di~aA~~aG~~~i~~~~~~~~~~-~~-----~~~~~~~~~~~~l~~~~~ 213 (221)
T PRK10563 164 LVDDS-SAGAQSGIAAGMEVFYFCADPHNKP-ID-----HPLVTTFTDLAQLPELWK 213 (221)
T ss_pred EEeCc-HhhHHHHHHCCCEEEEECCCCCCcc-hh-----hhhhHHHHHHHHHHHHHH
Confidence 99999 5999999999999999976544322 11 345667888888887654
No 52
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.65 E-value=3.1e-15 Score=126.00 Aligned_cols=46 Identities=28% Similarity=0.337 Sum_probs=43.7
Q ss_pred CCCcHHHHHHHHHHc-CCCCCcEEEEcC-CchhhHHHHHHcCCeEEEEe
Q 016293 310 GKPSTFMMDYLANKF-GIQKSQICMVGD-RLDTDILFGQNGGCKTLLVL 356 (392)
Q Consensus 310 gKP~p~~~~~~~~~l-gv~~~evi~IGD-~l~nDI~ma~~aG~~~i~V~ 356 (392)
.||+|.+|+.+++++ ++++++|+|||| . .+|+.+|+++|+.+|++.
T Consensus 84 ~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~-~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 RKPKPGMFLEALKRFNEIDPEESVYVGDQD-LTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCCChHHHHHHHHHcCCCChhheEEEcCCC-cccHHHHHHCCCeEEEee
Confidence 799999999999999 599999999999 6 699999999999999985
No 53
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.64 E-value=2.7e-15 Score=138.91 Aligned_cols=235 Identities=20% Similarity=0.221 Sum_probs=135.0
Q ss_pred EEEEccCceec-CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCC
Q 016293 86 FIFDCDGVIWK-GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSP 164 (392)
Q Consensus 86 vifDlDGTL~d-~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~ 164 (392)
|++|+||||++ ...+.+.+.++|+.|+++|++++++| ||+...+...+..+++.. ++|+.||+.+..+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~T---GR~~~~~~~~~~~~~~~~--------~~I~~nGa~i~~~ 69 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIAT---GRSYSSIKRLLKELGIDD--------YFICSNGALIDDP 69 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEEC---SSTHHHHHHHHHHTTHCS--------EEEEGGGTEEEET
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEc---cCcccccccccccccchh--------hhcccccceeeec
Confidence 78999999988 44556689999999999999999999 999999999999999864 4899999998333
Q ss_pred CCCCcchhhhhch--HHHHHHHHHhcCCC----CCCEEEEEeCc--chHHHHH-HcCCceecCCCCCCcccccCCCcccc
Q 016293 165 NSSEFSQEEIFAS--SFAAAAYLKSIDFP----KDKKVYVVGED--GILKELE-LAGFQYLGGPEDGGKKIELKPGFLME 235 (392)
Q Consensus 165 ~~~~~~~e~i~~~--~~~~~~~l~~~~~~----~~~~~~v~~~~--~~~~~l~-~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (392)
.. ++..+..+.. ...+.++++..++. ....+++.... ....... ........ ......
T Consensus 70 ~~-~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 136 (254)
T PF08282_consen 70 KG-KILYEKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESI------------VSEDDL 136 (254)
T ss_dssp TT-EEEEEESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEE------------SHHHHH
T ss_pred cc-ccchhhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccc------------cccccc
Confidence 22 2222222221 13344555554421 01122222220 0111111 11111100 000000
Q ss_pred CCCCccEEEEEeccCCCHHHHHHHHHHHHhC-CCc-EEEEecCCccccccccccccCCCccceeeecccCCCccccCCCc
Q 016293 236 HDKDVGAVVVGFDRYFNYYKVQYGTLCIREN-PGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPS 313 (392)
Q Consensus 236 ~~~~~~~v~~~~d~~~~~~~~~~~~~~l~~~-~g~-~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~ 313 (392)
....+..+.... ...........+.+. .+. .++.++... .+....+-.|
T Consensus 137 ~~~~i~ki~~~~----~~~~~~~l~~~l~~~~~~~~~~~~~~~~~-------------------------lei~~~~vsK 187 (254)
T PF08282_consen 137 EDEEIFKILFFP----DPEDLEQLREELKKKFPNLIDVVRSSPYF-------------------------LEITPKGVSK 187 (254)
T ss_dssp HCSSESEEEEES----CHHHHHHHHHHHHHHHTTTEEEEEEETTE-------------------------EEEEETTSSH
T ss_pred ccccceeeeccc----cchhhhhhhhhhccccCcceeEEEecccc-------------------------eEEeeCCCCH
Confidence 122333333211 122222222222211 111 222222221 1223346778
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhh
Q 016293 314 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD 383 (392)
Q Consensus 314 p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~e 383 (392)
..+++.+++.+|++++++++|||+ .||++|++.+| ..|..+...++..+ .+++++.+..+
T Consensus 188 ~~ai~~l~~~~~i~~~~~~~~GD~-~ND~~Ml~~~~---~~~am~na~~~~k~------~a~~i~~~~~~ 247 (254)
T PF08282_consen 188 GSAIKYLLEYLGISPEDIIAFGDS-ENDIEMLELAG---YSVAMGNATPELKK------AADYITPSNND 247 (254)
T ss_dssp HHHHHHHHHHHTTSGGGEEEEESS-GGGHHHHHHSS---EEEEETTS-HHHHH------HSSEEESSGTC
T ss_pred HHHHHHHhhhcccccceeEEeecc-cccHhHHhhcC---eEEEEcCCCHHHHH------hCCEEecCCCC
Confidence 999999999999999999999999 69999999999 44444655544433 58888888766
No 54
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.64 E-value=4.3e-15 Score=139.47 Aligned_cols=70 Identities=20% Similarity=0.181 Sum_probs=60.9
Q ss_pred EEEEEccCceecCCe-eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCC
Q 016293 85 TFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPS 163 (392)
Q Consensus 85 ~vifDlDGTL~d~~~-~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~ 163 (392)
+|++||||||+++.. .++.+.++|++|+++|++++++| ||+...+...++.+|+.. ++||.||+.+..
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~T---gR~~~~~~~~~~~~~~~~--------~~I~~NGa~i~~ 69 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCT---SKTAAEVEYLRKELGLED--------PFIVENGGAIYG 69 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcCCCC--------cEEEcCCeEEEe
Confidence 489999999999776 77789999999999999999999 999999999999999853 378888887765
Q ss_pred CC
Q 016293 164 PN 165 (392)
Q Consensus 164 ~~ 165 (392)
+.
T Consensus 70 ~~ 71 (256)
T TIGR01486 70 PR 71 (256)
T ss_pred CC
Confidence 43
No 55
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.64 E-value=3.4e-15 Score=128.35 Aligned_cols=48 Identities=27% Similarity=0.457 Sum_probs=46.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
.||+|.+|+.+++++|+++++|++|||+ ..|+++|+++|+++|+|..|
T Consensus 100 ~KP~~~~~~~~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 RKPKPGLILEALKRLGVDASRSLVVGDR-LRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEcCC-HHHHHHHHHCCCCEEEecCC
Confidence 6999999999999999999999999999 79999999999999999765
No 56
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.64 E-value=2.6e-15 Score=142.28 Aligned_cols=71 Identities=18% Similarity=0.141 Sum_probs=62.5
Q ss_pred cCcEEEEEccCceec-CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 82 SVETFIFDCDGVIWK-GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 82 ~ik~vifDlDGTL~d-~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
++|+|++||||||++ .+.+.+++.++|++|+++|++++++| ||+...+...++.+|+..+ ++|.||+.
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaT---gR~~~~~~~~~~~l~l~~~--------~i~~nGa~ 71 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCT---SKTAAEVEVLRKELGLEDP--------FIVENGAA 71 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCCCC--------EEEEcCcE
Confidence 689999999999998 56678889999999999999999999 8999999999999998643 67888887
Q ss_pred CCC
Q 016293 161 IPS 163 (392)
Q Consensus 161 ~~~ 163 (392)
+..
T Consensus 72 i~~ 74 (273)
T PRK00192 72 IYI 74 (273)
T ss_pred EEe
Confidence 754
No 57
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.63 E-value=6.2e-15 Score=135.46 Aligned_cols=128 Identities=23% Similarity=0.258 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.....+..++.. ..++++||..... ........|+..+++.+..+.... ..||+|.+|+.+++++|++|++|+
T Consensus 101 ~~~~~~~L~~l~~~-~~l~ilTNg~~~~-~~~~l~~~gl~~~Fd~v~~s~~~g---~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 101 YPEALEALKELGKK-YKLGILTNGARPH-QERKLRQLGLLDYFDAVFISEDVG---VAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred ChhHHHHHHHHHhh-ccEEEEeCCChHH-HHHHHHHcCChhhhheEEEecccc---cCCCCcHHHHHHHHHcCCCcceEE
Confidence 55566666666654 4578999965422 122223445666777777666655 589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
+|||++.|||.+|+++||++||+..+.... . +....|++.+.++.++.+.+..
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~---~--~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGGKPL---P--DALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCCCCC---C--CCccCCceEEcCHHHHHHHHhh
Confidence 999999999999999999999998865332 1 1125799999999999988764
No 58
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.63 E-value=9.3e-16 Score=168.68 Aligned_cols=122 Identities=16% Similarity=0.166 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCC-ccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGG-SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 331 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~ev 331 (392)
++.+.+.+..|++..-..+|+||....... ......+.. .+++.+..... ...+||+|++|+.+++++|++|++|
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~-~~L~~~gl~~~~Fd~iv~~~~---~~~~KP~Pe~~~~a~~~lgv~p~e~ 238 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSADRIKVD-ANLAAAGLPLSMFDAIVSADA---FENLKPAPDIFLAAAKILGVPTSEC 238 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHH-HHHHHcCCChhHCCEEEECcc---cccCCCCHHHHHHHHHHcCcCcccE
Confidence 455677777777655567888988764321 112223332 34555544433 3358999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhH
Q 016293 332 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 384 (392)
Q Consensus 332 i~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el 384 (392)
++|||+ ..|+++|+++||++|+|.++. ..+.+.. ..|+++++++.|+
T Consensus 239 v~IgDs-~~Di~AA~~aGm~~I~v~~~~-~~~~L~~----~~a~~vi~~l~el 285 (1057)
T PLN02919 239 VVIEDA-LAGVQAARAAGMRCIAVTTTL-SEEILKD----AGPSLIRKDIGNI 285 (1057)
T ss_pred EEEcCC-HHHHHHHHHcCCEEEEECCCC-CHHHHhh----CCCCEEECChHHC
Confidence 999999 599999999999999999986 4455544 6799999999986
No 59
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.62 E-value=4e-15 Score=136.93 Aligned_cols=105 Identities=10% Similarity=0.027 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..+++.+...+|+||....... ......+...+++.+..+... ...||+|++|+.+++++|++|++|+
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~-~~l~~~~l~~~fd~iv~s~~~---~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHNLA-VKLEHTGLDAHLDLLLSTHTF---GYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHHHH-HHHHHCCcHHHCCEEEEeeeC---CCCCCCHHHHHHHHHHcCCChHHEE
Confidence 455677788888765567899997643321 112233444445554444333 3489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeE-EEEecCCCCh
Q 016293 333 MVGDRLDTDILFGQNGGCKT-LLVLSGVTSL 362 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~-i~V~~G~~~~ 362 (392)
+|||+ .+|+++|+++|+.+ ++|.++.+..
T Consensus 171 ~igDs-~~di~aA~~aG~~~~~~v~~~~~~~ 200 (224)
T PRK14988 171 FIDDS-EPILDAAAQFGIRYCLGVTNPDSGI 200 (224)
T ss_pred EEcCC-HHHHHHHHHcCCeEEEEEeCCCCCc
Confidence 99999 59999999999984 7788876543
No 60
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.61 E-value=5e-15 Score=150.39 Aligned_cols=124 Identities=18% Similarity=0.158 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
|+.+.+.+..++..+....|+||....... ......+...+++.+...... ..||+|+.|..++++++ +++|+
T Consensus 332 ~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~-~~l~~~~l~~~f~~i~~~d~v----~~~~kP~~~~~al~~l~--~~~~v 404 (459)
T PRK06698 332 YPNVKEIFTYIKENNCSIYIASNGLTEYLR-AIVSYYDLDQWVTETFSIEQI----NSLNKSDLVKSILNKYD--IKEAA 404 (459)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHHCCcHhhcceeEecCCC----CCCCCcHHHHHHHHhcC--cceEE
Confidence 556777788887766667899998764322 222233444455555443322 24788899999999875 68999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
+|||+ .+|+++|+++|+.+|++.+|....+.. ..||++++++.||.+++.+
T Consensus 405 ~VGDs-~~Di~aAk~AG~~~I~v~~~~~~~~~~------~~~d~~i~~l~el~~~l~~ 455 (459)
T PRK06698 405 VVGDR-LSDINAAKDNGLIAIGCNFDFAQEDEL------AQADIVIDDLLELKGILST 455 (459)
T ss_pred EEeCC-HHHHHHHHHCCCeEEEEeCCCCccccc------CCCCEEeCCHHHHHHHHHH
Confidence 99999 599999999999999999987554333 3589999999999998765
No 61
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.61 E-value=9.2e-15 Score=127.36 Aligned_cols=56 Identities=23% Similarity=0.342 Sum_probs=51.5
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhc
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML 365 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l 365 (392)
..||+|.+++.+++++++++++|+||||+ .+|+++|+++|+.++++.++.-+.+..
T Consensus 101 ~~KP~~~~~~~~~~~~~~~~~e~l~IGD~-~~Di~~A~~aGi~~i~~~~~~~~~~~~ 156 (161)
T TIGR01261 101 CRKPKIKLLEPYLKKNLIDKARSYVIGDR-ETDMQLAENLGIRGIQYDEEELNWDMI 156 (161)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEeCC-HHHHHHHHHCCCeEEEEChhhcCHHHH
Confidence 37999999999999999999999999999 699999999999999999987666544
No 62
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.61 E-value=1.7e-15 Score=114.93 Aligned_cols=74 Identities=35% Similarity=0.581 Sum_probs=67.4
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhH
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 384 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el 384 (392)
+|||+|.+|+.+++++++++++|+||||++.+||.+|+++|+.+|+|.+|....+.+.. ....|||++++|.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~--~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEK--AEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHH--SSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhc--cCCCCCEEECCHHhC
Confidence 59999999999999999999999999999669999999999999999999988777652 236899999999986
No 63
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=99.60 E-value=2.4e-14 Score=132.37 Aligned_cols=249 Identities=23% Similarity=0.255 Sum_probs=179.2
Q ss_pred cEEEEEccCceecCCeeCCCHHHHHHHHHHC----CCcEEEEeCCCCCCHHHHHHhh-HhCCceeeccccccceeeeccc
Q 016293 84 ETFIFDCDGVIWKGDKLIDGVPETLDMLRSK----GKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEVKDSFLSIVCLKF 158 (392)
Q Consensus 84 k~vifDlDGTL~d~~~~~~~~~eal~~l~~~----Gi~~~i~Tn~~gr~~~~~~~~l-~~lgl~~~~~~~~f~~~i~~~~ 158 (392)
=+++||+||+|+.++++++++.+|++.|.++ .|+++++||.+|-+...-+..+ ..||..++
T Consensus 36 fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs-------------- 101 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVS-------------- 101 (389)
T ss_pred eeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccC--------------
Confidence 3899999999999999999999999999999 8999999999888887777777 57999887
Q ss_pred ccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccC---CC----
Q 016293 159 HRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELK---PG---- 231 (392)
Q Consensus 159 ~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~---~~---- 231 (392)
.++++.+......+.+ + ..+.+.+.|........+..|++-+...++....+.+. .+
T Consensus 102 ------------~dqviqSHsP~r~l~~-~---~~k~vLv~G~~~vr~vAegyGFk~Vvt~D~l~k~f~~ldP~t~~~~~ 165 (389)
T KOG1618|consen 102 ------------ADQVIQSHSPFRLLVE-Y---HYKRVLVVGQGSVREVAEGYGFKNVVTVDELAKYFPLLDPFTDLSRE 165 (389)
T ss_pred ------------HHHHHhhcChHHHHhh-h---hhceEEEecCCcHHHHhhccCccceeeHHHHHHhCCCcccccchhHh
Confidence 6788766655544442 1 33668888888888888888876544211111111110 01
Q ss_pred -----cc--ccCCCCccEEEEEeccCCCHHHHHHHHHHHHhCC-------------CcEEEEecCCccccccccccccCC
Q 016293 232 -----FL--MEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENP-------------GCLFIATNRDAVTHLTDAQEWAGG 291 (392)
Q Consensus 232 -----~~--~~~~~~~~~v~~~~d~~~~~~~~~~~~~~l~~~~-------------g~~~I~tn~d~~~~~~~~~~~~~~ 291 (392)
.. .+....++++++-.|+..+...++-...+++.+. .+.++++|.|..+..+......|.
T Consensus 166 ~k~~~~~R~~~~~r~ieAv~~~~dPv~W~~dlQli~D~l~snG~~gt~~~a~~~~Phipiy~sN~DLlW~~e~~lpR~G~ 245 (389)
T KOG1618|consen 166 LKTTKLARDRELFRRIEAVLLLGDPVRWETDLQLIMDVLLSNGSPGTGRLATGPYPHIPIYASNMDLLWMAEYKLPRFGH 245 (389)
T ss_pred hhcccchhccccccceeEEEEecCchhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCceEEecccccccccCCCccccc
Confidence 11 1235677888887787777777787788877521 225778899987766666666777
Q ss_pred Cccceeeeccc------CCCccccCCCcHHHHHHHHHHc--------CC-CCCcEEEEcCCchhhHHHHH----------
Q 016293 292 GSMVGAFVGST------QREPLVVGKPSTFMMDYLANKF--------GI-QKSQICMVGDRLDTDILFGQ---------- 346 (392)
Q Consensus 292 ~~~~~~i~~~~------~~~~~~~gKP~p~~~~~~~~~l--------gv-~~~evi~IGD~l~nDI~ma~---------- 346 (392)
|.+.-.+...+ ..+....|||.+-.|+++...+ +. ++..+.||||++..|+..|+
T Consensus 246 GaF~l~lesiy~kltGk~L~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~ 325 (389)
T KOG1618|consen 246 GAFRLCLESIYQKLTGKPLRYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELG 325 (389)
T ss_pred hHHHHHHHHHHHHhcCCcccccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccc
Confidence 77654444332 2344578999998887765443 22 45789999999999999997
Q ss_pred -----HcCCeEEEEecCCCCh
Q 016293 347 -----NGGCKTLLVLSGVTSL 362 (392)
Q Consensus 347 -----~aG~~~i~V~~G~~~~ 362 (392)
.-|+.+|+|.||..+.
T Consensus 326 ~g~~~~~~w~SILV~TGV~~~ 346 (389)
T KOG1618|consen 326 AGGSANYGWISILVRTGVYNG 346 (389)
T ss_pred cccccCCCceEEEEeeeeecC
Confidence 6789999999998763
No 64
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.59 E-value=2.5e-15 Score=134.03 Aligned_cols=93 Identities=16% Similarity=0.101 Sum_probs=67.9
Q ss_pred HHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEEEEcCC
Q 016293 258 YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDR 337 (392)
Q Consensus 258 ~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi~IGD~ 337 (392)
+.+..+++. ...+|+||...... .......+...+++.+.++... ...||+|++|+.+++++|++|++|++|||+
T Consensus 94 e~L~~L~~~-~~l~I~T~~~~~~~-~~~l~~~~l~~~fd~i~~~~~~---~~~KP~p~~~~~~~~~~~~~~~~~l~igDs 168 (188)
T PRK10725 94 EVVKAWHGR-RPMAVGTGSESAIA-EALLAHLGLRRYFDAVVAADDV---QHHKPAPDTFLRCAQLMGVQPTQCVVFEDA 168 (188)
T ss_pred HHHHHHHhC-CCEEEEcCCchHHH-HHHHHhCCcHhHceEEEehhhc---cCCCCChHHHHHHHHHcCCCHHHeEEEecc
Confidence 445555543 46788888765332 1222233444455555554333 358999999999999999999999999999
Q ss_pred chhhHHHHHHcCCeEEEEe
Q 016293 338 LDTDILFGQNGGCKTLLVL 356 (392)
Q Consensus 338 l~nDI~ma~~aG~~~i~V~ 356 (392)
.+|+++|+++|+++|+|.
T Consensus 169 -~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 169 -DFGIQAARAAGMDAVDVR 186 (188)
T ss_pred -HhhHHHHHHCCCEEEeec
Confidence 699999999999999985
No 65
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.58 E-value=5e-15 Score=133.89 Aligned_cols=97 Identities=22% Similarity=0.149 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++......+|+||.+... .......+...+++.+..+... ...||+|.+|+.+++++|++|++|+
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--~~~l~~~~l~~~fd~i~~s~~~---~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSRL--RGLLEALGLLEYFDFVVTSYEV---GAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchhH--HHHHHHCCcHHhcceEEeeccc---CCCCCCHHHHHHHHHHcCCChhHEE
Confidence 4567778888886555678999986532 1222233444455555544443 3489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEE
Q 016293 333 MVGDRLDTDILFGQNGGCKTLL 354 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~ 354 (392)
+|||++.+||++|+++|+.+||
T Consensus 182 ~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHHcCCeeeC
Confidence 9999954899999999999985
No 66
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.57 E-value=2.5e-14 Score=131.67 Aligned_cols=70 Identities=24% Similarity=0.271 Sum_probs=62.0
Q ss_pred EEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCC
Q 016293 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSP 164 (392)
Q Consensus 85 ~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~ 164 (392)
+|+|||||||++++..++++.++|++|+++|++++++| ||+...+..+++++|+..+ +||+||+.+..|
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~T---gR~~~~~~~~~~~lg~~~~--------~I~~NGa~I~~~ 69 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVS---SKTRAEQEYYREELGVEPP--------FIVENGGAIFIP 69 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEe---CCCHHHHHHHHHHcCCCCc--------EEEcCCcEEEec
Confidence 48999999999977788889999999999999999999 9999999999999998544 788888888765
Q ss_pred C
Q 016293 165 N 165 (392)
Q Consensus 165 ~ 165 (392)
.
T Consensus 70 ~ 70 (225)
T TIGR02461 70 R 70 (225)
T ss_pred C
Confidence 3
No 67
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.57 E-value=3.4e-14 Score=127.93 Aligned_cols=117 Identities=12% Similarity=0.101 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccc-eeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV-GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 331 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~ev 331 (392)
|+.+.+.+..|++. +..+++||...... .......+...++ ..+....+.+. .||+|+.|+.+++++| +++|
T Consensus 76 ~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~-~~~~~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~--~~~~ 148 (197)
T PHA02597 76 YDDALDVINKLKED-YDFVAVTALGDSID-ALLNRQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG--DRVV 148 (197)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCccchh-HHHHhhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC--CCcE
Confidence 45567777777764 55677787654221 1111111222211 11222222222 4788999999999999 8899
Q ss_pred EEEcCCchhhHHHHHHc--CCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHH
Q 016293 332 CMVGDRLDTDILFGQNG--GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 385 (392)
Q Consensus 332 i~IGD~l~nDI~ma~~a--G~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~ 385 (392)
++|||+ .+|+++|+++ |+++|++.||.. +.. ..++|.++++.|+.
T Consensus 149 v~vgDs-~~di~aA~~a~~Gi~~i~~~~~~~--~~~------~~~~~~~~~~~~~~ 195 (197)
T PHA02597 149 CFVDDL-AHNLDAAHEALSQLPVIHMLRGER--DHI------PKLAHRVKSWNDIE 195 (197)
T ss_pred EEeCCC-HHHHHHHHHHHcCCcEEEecchhh--ccc------cchhhhhccHHHHh
Confidence 999999 5999999999 999999999853 221 35789999999986
No 68
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.56 E-value=1e-14 Score=131.37 Aligned_cols=101 Identities=18% Similarity=0.122 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+|+||...... .......+...+++.+..+... ...||+|.+|+.+++++|++|++|+
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~-~~~l~~~gl~~~fd~i~~s~~~---~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPAML-KSLVKHAGLDDPFDAVLSADAV---RAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHCCChhhhheeEehhhc---CCCCCCHHHHHHHHHHhCCChhhEE
Confidence 44567778888865556789999875332 1222233444445555444333 3589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
+|||++ +|+++|+++|+.+|+|..+
T Consensus 170 ~vgD~~-~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNP-WDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred EEeCCH-HHHHHHHHCCCcEEEecCC
Confidence 999995 9999999999999999874
No 69
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.56 E-value=3.7e-14 Score=124.29 Aligned_cols=45 Identities=36% Similarity=0.524 Sum_probs=41.5
Q ss_pred CCCcHHHHHHHHHHcC--CCCCcEEEEcCCc-------hhhHHHHHHcCCeEEE
Q 016293 310 GKPSTFMMDYLANKFG--IQKSQICMVGDRL-------DTDILFGQNGGCKTLL 354 (392)
Q Consensus 310 gKP~p~~~~~~~~~lg--v~~~evi~IGD~l-------~nDI~ma~~aG~~~i~ 354 (392)
.||+|.+++.+++++| +++++++||||+. .+|+++|+++|+.+++
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 7999999999999999 9999999999992 2699999999999876
No 70
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.55 E-value=5.1e-14 Score=128.15 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCcccccc-ccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLT-DAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 331 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~ev 331 (392)
++.+.+.+..|++.+...+|+||........ ......+...+++.+..+.... ..||+|.+|+.+++++|++|++|
T Consensus 96 ~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~---~~KP~p~~~~~~~~~~g~~~~~~ 172 (211)
T TIGR02247 96 RPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEG---LRKPDPRIYQLMLERLGVAPEEC 172 (211)
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecC---CCCCCHHHHHHHHHHcCCCHHHe
Confidence 5667778888887555678889875422111 1111122334455554433333 48999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEecCCCChhh
Q 016293 332 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM 364 (392)
Q Consensus 332 i~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~ 364 (392)
++|||+ ..|+.+|+++|+.+|++.++......
T Consensus 173 l~i~D~-~~di~aA~~aG~~~i~v~~~~~~~~~ 204 (211)
T TIGR02247 173 VFLDDL-GSNLKPAAALGITTIKVSDEEQAIHD 204 (211)
T ss_pred EEEcCC-HHHHHHHHHcCCEEEEECCHHHHHHH
Confidence 999999 69999999999999999875444333
No 71
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.55 E-value=1.6e-13 Score=128.37 Aligned_cols=205 Identities=18% Similarity=0.180 Sum_probs=119.6
Q ss_pred EEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 85 TFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 85 ~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
+|+.||||||++ +....|...+.+++++++|++++++| ||+..++..+++.+++..+ .++|+.||+.
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aT---GR~~~~~~~~~~~~~~~~p------~~~I~~NGa~ 73 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYST---GRSPHSYKELQKQKPLLTP------DIWVTSVGSE 73 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEc---CCCHHHHHHHHhcCCCCCC------CEEEEcCCce
Confidence 789999999995 44567789999999999999999999 9999999999888887543 4588899998
Q ss_pred CCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCccccCCCCc
Q 016293 161 IPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDV 240 (392)
Q Consensus 161 ~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (392)
+..+.. ...+..+ ..++... ++ . ..+..+. .++..... ... .....
T Consensus 74 I~~~~~--~~~~~~~------~~~~~~~-------~~---~-~~~~~~~-~~~~~l~~----------~~~----~~~~~ 119 (249)
T TIGR01485 74 IYYGGA--EVPDQHW------AEYLSEK-------WQ---R-DIVVAIT-DKFEELKP----------QPD----LEQRP 119 (249)
T ss_pred EEeCCC--CcCCHHH------HHHHhcc-------cC---H-HHHHHHH-hcCccccc----------CCc----cccCC
Confidence 876421 0011111 1111110 00 0 1111111 11111100 000 01112
Q ss_pred cEEEEEeccCCCHHHHHHHHHHHHhCC-CcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHH
Q 016293 241 GAVVVGFDRYFNYYKVQYGTLCIRENP-GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDY 319 (392)
Q Consensus 241 ~~v~~~~d~~~~~~~~~~~~~~l~~~~-g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~ 319 (392)
-.+.+..+..............+.... ....+.++. ...+....+++|+.+++.
T Consensus 120 ~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-------------------------~~ldi~~~~~~K~~al~~ 174 (249)
T TIGR01485 120 HKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSG-------------------------KDLDILPQGSGKGQALQY 174 (249)
T ss_pred eeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECC-------------------------ceEEEEeCCCChHHHHHH
Confidence 222221111100001111111121111 111111111 112334458999999999
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 320 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 320 ~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
+++++|+++++|++|||+ .||++|++.+|..++.+.++
T Consensus 175 l~~~~~i~~~~~i~~GD~-~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 175 LLQKLAMEPSQTLVCGDS-GNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHHHcCCCccCEEEEECC-hhHHHHHHccCCcEEEECCC
Confidence 999999999999999999 69999999988788888764
No 72
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.55 E-value=9.2e-14 Score=125.44 Aligned_cols=110 Identities=14% Similarity=0.093 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+|+||..............+...+++.+..+.... .+||+|++|+.+++++|++|++|+
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~---~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLG---MRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccC---CCCCCHHHHHHHHHHcCCChhHeE
Confidence 56678888888876667889999875321110011223344455555544444 489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhcc
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ 366 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~ 366 (392)
+|||+ ..|+++|+++|+.+|++.++....+.++
T Consensus 163 ~vgD~-~~di~aA~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 163 FFDDN-ADNIEAANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred EeCCC-HHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence 99999 5999999999999999998766555443
No 73
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.55 E-value=6.7e-15 Score=130.80 Aligned_cols=97 Identities=16% Similarity=0.074 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++......+|+||.... .......+...+++.+..+... ...||+|++|+.+++++|+++++|+
T Consensus 89 ~pg~~~~L~~L~~~g~~~~i~s~~~~~---~~~l~~~~l~~~f~~~~~~~~~---~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 89 LPGIKNLLDDLKKNNIKIALASASKNA---PTVLEKLGLIDYFDAIVDPAEI---KKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCccH---HHHHHhcCcHhhCcEEEehhhc---CCCCCChHHHHHHHHHcCCCHHHeE
Confidence 455677777777655556777875431 1112223444445554443333 3489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEe
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVL 356 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~ 356 (392)
+|||+ .+|+++|+++|+++|+|+
T Consensus 163 ~vgD~-~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 163 GIEDA-QAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred EEecC-HHHHHHHHHcCCEEEecC
Confidence 99999 599999999999999874
No 74
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.54 E-value=9.3e-14 Score=122.32 Aligned_cols=56 Identities=30% Similarity=0.408 Sum_probs=51.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhc
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML 365 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l 365 (392)
.||+|.+|+.+++++|+++++|+||||++.+|+.+|+++|+.+|+|.+|....+.+
T Consensus 90 ~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~ 145 (170)
T TIGR01668 90 VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF 145 (170)
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence 79999999999999999999999999995479999999999999999998765544
No 75
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.54 E-value=1e-12 Score=124.00 Aligned_cols=70 Identities=17% Similarity=0.064 Sum_probs=57.1
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc---CCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHH
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG---GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 385 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~a---G~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~ 385 (392)
.+-.|..+++.+++++|+..+++++|||+ .||+.|.+.+ |-.+|.|..+ . ..+.|.+++..++.
T Consensus 171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~-~nD~~mf~~~~~~~g~~vavg~a--~----------~~A~~~l~~~~~v~ 237 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDD-LTDEAGFAVVNRLGGISVKVGTG--A----------TQASWRLAGVPDVW 237 (266)
T ss_pred CCCCHHHHHHHHHHhcCCCCCeEEEEcCC-ccHHHHHHHHHhcCCeEEEECCC--C----------CcCeEeCCCHHHHH
Confidence 46778999999999999999999999999 6999999998 2244554332 2 24789999999999
Q ss_pred HhHHhh
Q 016293 386 SLKAAA 391 (392)
Q Consensus 386 ~~~~~~ 391 (392)
+++..+
T Consensus 238 ~~L~~l 243 (266)
T PRK10187 238 SWLEMI 243 (266)
T ss_pred HHHHHH
Confidence 998765
No 76
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.54 E-value=1.4e-14 Score=128.78 Aligned_cols=96 Identities=11% Similarity=0.094 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+++||... . .......+...+++.+.... .....||+|++|+.+++++|+++++|+
T Consensus 90 ~~g~~~~l~~l~~~g~~i~i~S~~~~-~--~~~l~~~~l~~~f~~v~~~~---~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 90 LPGIENFLKRLKKKGIAVGLGSSSKN-A--DRILAKLGLTDYFDAIVDAD---EVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCchh-H--HHHHHHcChHHHCCEeeehh---hCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 45567777777765445677787622 1 11122334444444444333 233489999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEE
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLV 355 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V 355 (392)
+|||+ .+|+++|+++|+++|+|
T Consensus 164 ~IgD~-~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 164 VFEDA-LAGVQAARAAGMFAVAV 185 (185)
T ss_pred EEeCc-HhhHHHHHHCCCeEeeC
Confidence 99999 69999999999999975
No 77
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.54 E-value=4.2e-14 Score=119.89 Aligned_cols=48 Identities=31% Similarity=0.459 Sum_probs=46.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEec
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 357 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~ 357 (392)
+||.+..|+.+++.+++++++|+||||++.+||.+++.+||.||+|..
T Consensus 92 ~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 92 KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 899999999999999999999999999999999999999999999975
No 78
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.52 E-value=5e-13 Score=123.89 Aligned_cols=70 Identities=16% Similarity=0.085 Sum_probs=57.7
Q ss_pred EEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCC
Q 016293 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSP 164 (392)
Q Consensus 85 ~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~ 164 (392)
+|++|+||||+++...++...++++ ++++|++++++| ||+..++...++.+++.. +.++|+.||+.+..+
T Consensus 1 li~~DlDgTLl~~~~~~~~~~~~~~-~~~~gi~~viaT---GR~~~~v~~~~~~l~l~~------~~~~I~~nGa~i~~~ 70 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFVELLR-GSGDAVGFGIAT---GRSVESAKSRYAKLNLPS------PDVLIARVGTEIYYG 70 (236)
T ss_pred CeEEeccccccCCHHHHHHHHHHHH-hcCCCceEEEEe---CCCHHHHHHHHHhCCCCC------CCEEEECCCceEEeC
Confidence 4789999999987665555557776 699999999999 999999999999998863 346889999987543
No 79
>PTZ00174 phosphomannomutase; Provisional
Probab=99.49 E-value=3.9e-13 Score=125.52 Aligned_cols=74 Identities=19% Similarity=0.169 Sum_probs=58.9
Q ss_pred hcCcEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccc
Q 016293 81 DSVETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFH 159 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~ 159 (392)
+.+|+|+|||||||++++ .+.+.+.++|++++++|++++++| ||+...+.+.++...... +.++|+.||+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaT---GR~~~~i~~~l~~~~~~~------~~~~I~~NGa 73 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVG---GSDYPKIKEQLGEDVLED------FDYVFSENGL 73 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHhhhhhcc------cCeEEeCCce
Confidence 358999999999999865 477789999999999999999999 999998877775332211 2356788888
Q ss_pred cCCC
Q 016293 160 RIPS 163 (392)
Q Consensus 160 ~~~~ 163 (392)
.+..
T Consensus 74 ~I~~ 77 (247)
T PTZ00174 74 VAYK 77 (247)
T ss_pred EEEE
Confidence 7764
No 80
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.49 E-value=1.2e-13 Score=125.89 Aligned_cols=103 Identities=20% Similarity=0.161 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 016293 254 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 333 (392)
Q Consensus 254 ~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi~ 333 (392)
....+.++.++...-++.+.||-|.... ..+...+...+++.+..++.... .||+|.+|+++++++|++|++|++
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~--~~l~~~~l~~~fD~vv~S~e~g~---~KPDp~If~~al~~l~v~Pee~vh 190 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRLR--LLLLPLGLSAYFDFVVESCEVGL---EKPDPRIFQLALERLGVKPEECVH 190 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHHH--HHhhccCHHHhhhhhhhhhhhcc---CCCChHHHHHHHHHhCCChHHeEE
Confidence 3455777788764436778888887553 33344555566777766666664 899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCeEEEEecCCCC
Q 016293 334 VGDRLDTDILFGQNGGCKTLLVLSGVTS 361 (392)
Q Consensus 334 IGD~l~nDI~ma~~aG~~~i~V~~G~~~ 361 (392)
|||.+.||+++|+++|+.+++|-.....
T Consensus 191 IgD~l~nD~~gA~~~G~~ailv~~~~~~ 218 (237)
T KOG3085|consen 191 IGDLLENDYEGARNLGWHAILVDNSITA 218 (237)
T ss_pred ecCccccccHhHHHcCCEEEEEccccch
Confidence 9999999999999999999999876543
No 81
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.47 E-value=7.4e-13 Score=123.84 Aligned_cols=71 Identities=18% Similarity=0.244 Sum_probs=63.3
Q ss_pred CcEEEEEccCceec-CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccC
Q 016293 83 VETFIFDCDGVIWK-GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRI 161 (392)
Q Consensus 83 ik~vifDlDGTL~d-~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~ 161 (392)
+|+|++||||||+| .+..++.+.++|++|+++|++++++| ||+..++..+++.+++..+ +||.||+.+
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaT---GRt~~ev~~l~~~Lgl~~p--------~I~eNGA~I 69 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYS---LRTRAQLEHLCRQLRLEHP--------FICEDGSAI 69 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHhCCCCe--------EEEeCCcEE
Confidence 57999999999999 44467789999999999999999999 9999999999999998654 889999988
Q ss_pred CCC
Q 016293 162 PSP 164 (392)
Q Consensus 162 ~~~ 164 (392)
..|
T Consensus 70 ~~p 72 (302)
T PRK12702 70 YVP 72 (302)
T ss_pred EEc
Confidence 766
No 82
>PLN02811 hydrolase
Probab=99.47 E-value=1.5e-13 Score=126.09 Aligned_cols=125 Identities=15% Similarity=0.101 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcC---CCCC
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFG---IQKS 329 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lg---v~~~ 329 (392)
++.+.+.+..++..+....|+||..............+...+++.+.+.... ....+||+|++|..+++++| ++++
T Consensus 80 ~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~-~~~~~KP~p~~~~~a~~~~~~~~~~~~ 158 (220)
T PLN02811 80 MPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDP-EVKQGKPAPDIFLAAARRFEDGPVDPG 158 (220)
T ss_pred CccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChh-hccCCCCCcHHHHHHHHHhCCCCCCcc
Confidence 4566777777776656678888876432111111111223334444443310 23358999999999999997 9999
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHH
Q 016293 330 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 385 (392)
Q Consensus 330 evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~ 385 (392)
+|++|||+ ..|+++|+++|+.+|+|.++....... ..|+++++++.|+.
T Consensus 159 ~~v~IgDs-~~di~aA~~aG~~~i~v~~~~~~~~~~------~~~d~vi~~~~e~~ 207 (220)
T PLN02811 159 KVLVFEDA-PSGVEAAKNAGMSVVMVPDPRLDKSYC------KGADQVLSSLLDFK 207 (220)
T ss_pred ceEEEecc-HhhHHHHHHCCCeEEEEeCCCCcHhhh------hchhhHhcCHhhCC
Confidence 99999999 599999999999999999987554332 36899999998764
No 83
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.47 E-value=6.1e-13 Score=110.85 Aligned_cols=48 Identities=25% Similarity=0.373 Sum_probs=44.1
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEE
Q 016293 307 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 355 (392)
Q Consensus 307 ~~~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V 355 (392)
...+||++..+..++++++.+++++++|||+ .+|+++++++|+.+++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~-~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 92 FDIGKPNPDKLLAALKLLGVDPEEVLMVGDS-LNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cccCCCCHHHHHHHHHHcCCChhhEEEeCCC-HHHHHHHHHcCCceeeC
Confidence 3358999999999999999999999999999 59999999999999875
No 84
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.46 E-value=1.3e-12 Score=134.39 Aligned_cols=74 Identities=19% Similarity=0.175 Sum_probs=62.6
Q ss_pred hcCcEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccc
Q 016293 81 DSVETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFH 159 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~ 159 (392)
+..|+|++|+||||++.. ..++.+.++|++++++|++++++| ||+...+..+++.+++..+ +||.||+
T Consensus 414 ~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIAT---GRs~~~i~~l~~~Lgl~~~--------~I~eNGA 482 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCS---AKTMGEQDLYRNELGIKDP--------FITENGG 482 (694)
T ss_pred ceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEe---CCCHHHHHHHHHHcCCCCe--------EEEcCCC
Confidence 457899999999999854 456689999999999999999999 9999999999999998533 7788888
Q ss_pred cCCCCC
Q 016293 160 RIPSPN 165 (392)
Q Consensus 160 ~~~~~~ 165 (392)
.+..+.
T Consensus 483 ~I~~~~ 488 (694)
T PRK14502 483 AIFIPK 488 (694)
T ss_pred EEEECC
Confidence 776543
No 85
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.45 E-value=6.6e-13 Score=118.30 Aligned_cols=69 Identities=19% Similarity=0.241 Sum_probs=53.4
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEEC------ChhhH
Q 016293 311 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN------KISDF 384 (392)
Q Consensus 311 KP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~------sl~el 384 (392)
++++..++.+++++|+++++|+||||+ .+|+.+++++|+.. .+.+ ..+... ..|+|++. .+.||
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs-~~D~~~a~~aG~~~-~v~~---~~~~~~-----~~a~~v~~~~~g~g~~~el 164 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDD-LIDWPVMEKVGLSV-AVAD---AHPLLL-----PRADYVTRIAGGRGAVREV 164 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCC-HHHHHHHHHCCCeE-ecCC---hhHHHH-----HhCCEEecCCCCCCHHHHH
Confidence 345677899999999999999999999 59999999999984 4532 222222 46899996 68888
Q ss_pred HHhHH
Q 016293 385 LSLKA 389 (392)
Q Consensus 385 ~~~~~ 389 (392)
.+++.
T Consensus 165 ~~~i~ 169 (183)
T PRK09484 165 CDLLL 169 (183)
T ss_pred HHHHH
Confidence 87664
No 86
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.44 E-value=3.8e-13 Score=119.75 Aligned_cols=98 Identities=20% Similarity=0.199 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCc-cccCCCcHHHHHHHHHHcCCCCCcE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPSTFMMDYLANKFGIQKSQI 331 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~gKP~p~~~~~~~~~lgv~~~ev 331 (392)
++.+.+.+..++ ...+|+||...... .......+...+++.+........ ....||+|.+|+.+++++|++|++|
T Consensus 86 ~~g~~~~L~~L~---~~~~i~Tn~~~~~~-~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 161 (184)
T TIGR01993 86 DPELRNLLLRLP---GRKIIFTNGDRAHA-RRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPERA 161 (184)
T ss_pred CHHHHHHHHhCC---CCEEEEeCCCHHHH-HHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccce
Confidence 455666666664 45788999876332 222223344445555554433332 1125999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEE
Q 016293 332 CMVGDRLDTDILFGQNGGCKTLLV 355 (392)
Q Consensus 332 i~IGD~l~nDI~ma~~aG~~~i~V 355 (392)
++|||+ ..|+++|+++|+.+|+|
T Consensus 162 l~vgD~-~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 162 IFFDDS-ARNIAAAKALGMKTVLV 184 (184)
T ss_pred EEEeCC-HHHHHHHHHcCCEEeeC
Confidence 999999 59999999999999985
No 87
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.42 E-value=3.1e-13 Score=122.60 Aligned_cols=71 Identities=21% Similarity=0.257 Sum_probs=57.7
Q ss_pred cccCCCcHHHHHHHHHHcCCCC-CcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhH
Q 016293 307 LVVGKPSTFMMDYLANKFGIQK-SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 384 (392)
Q Consensus 307 ~~~gKP~p~~~~~~~~~lgv~~-~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el 384 (392)
...|||+|++|..+++++|.++ +.|++|+|++ ..+++|++|||.+|+|.+.. .+.... ..++.+++++.+.
T Consensus 147 v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~-~Gv~aa~aagm~vi~v~~~~--~~~~~~----~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 147 VKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSP-VGVQAAKAAGMQVVGVATPD--LSNLFS----AGATLILESLEDF 218 (222)
T ss_pred ccCCCCCchHHHHHHHhcCCCCccceEEECCCH-HHHHHHHhcCCeEEEecCCC--cchhhh----hccceeccccccc
Confidence 4468999999999999999999 9999999995 99999999999999999822 122211 4677777776653
No 88
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.42 E-value=1.8e-12 Score=112.22 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=50.7
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChh
Q 016293 311 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 382 (392)
Q Consensus 311 KP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~ 382 (392)
||+|..++.+++++|+++++|+||||+ .||++|++.+|+. +.+.++. +.++ ..|++++.+..
T Consensus 75 ~~k~~~~~~~~~~~~~~~~~~~~vGDs-~~D~~~~~~ag~~-~~v~~~~---~~~~-----~~a~~i~~~~~ 136 (154)
T TIGR01670 75 SNKLIAFSDILEKLALAPENVAYIGDD-LIDWPVMEKVGLS-VAVADAH---PLLI-----PRADYVTRIAG 136 (154)
T ss_pred cchHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHCCCe-EecCCcC---HHHH-----HhCCEEecCCC
Confidence 567888999999999999999999999 5999999999986 7776653 2333 35788887654
No 89
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.41 E-value=2.7e-12 Score=117.37 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=53.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEEC--ChhhHHHh
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFLSL 387 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~--sl~el~~~ 387 (392)
++|+|..++.+++++|+++++|++|||+ .+|+++|+.+|+..++ + ..+.+. ..+++++. ++.+++.+
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs-~~Di~aa~~ag~~i~~---~--~~~~~~-----~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDG-ANDLSMIKAAGLGIAF---N--AKPKLQ-----QKADICINKKDLTDILPL 218 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECC-HHHHHHHHhCCCeEEe---C--CCHHHH-----HhchhccCCCCHHHHHhh
Confidence 5788999999999999999999999999 5999999999987432 2 123333 25788865 77887765
No 90
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.40 E-value=8.4e-12 Score=109.35 Aligned_cols=75 Identities=28% Similarity=0.404 Sum_probs=63.4
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
+.||++.+++.+++++++++++.++|||++ +|+++|.++|+..+.+.+|......-. ...++...++.++..++
T Consensus 103 cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 176 (181)
T COG0241 103 CRKPKPGMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTGIGVTTDGA-----GRAKWVFDSLAEFANLI 176 (181)
T ss_pred ccCCChHHHHHHHHHhCCCccceEEecCcH-HHHHHHHHCCCCceEEEcCcccccccc-----cccccccccHHHHHHHH
Confidence 489999999999999999999999999995 999999999999999999876543321 25688888888887544
Q ss_pred H
Q 016293 389 A 389 (392)
Q Consensus 389 ~ 389 (392)
.
T Consensus 177 ~ 177 (181)
T COG0241 177 K 177 (181)
T ss_pred H
Confidence 3
No 91
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.40 E-value=1.4e-11 Score=111.51 Aligned_cols=66 Identities=26% Similarity=0.349 Sum_probs=54.2
Q ss_pred EEEEEccCceecCC--eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCC
Q 016293 85 TFIFDCDGVIWKGD--KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIP 162 (392)
Q Consensus 85 ~vifDlDGTL~d~~--~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~ 162 (392)
+|+||+||||++.+ .+.+.+.++|++|+++|++++++| ||+...+...++.++. ++++.||+.+.
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T---GR~~~~~~~~~~~~~~----------~~i~~nGa~i~ 67 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVT---GRSLAEIKELLKQLPL----------PLIAENGALIF 67 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHhCCC----------CEEECCCcEEE
Confidence 48999999999854 567789999999999999999999 8999999888876432 36677777765
Q ss_pred C
Q 016293 163 S 163 (392)
Q Consensus 163 ~ 163 (392)
.
T Consensus 68 ~ 68 (204)
T TIGR01484 68 Y 68 (204)
T ss_pred E
Confidence 4
No 92
>PLN02954 phosphoserine phosphatase
Probab=99.39 E-value=1.3e-11 Score=113.37 Aligned_cols=72 Identities=18% Similarity=0.360 Sum_probs=55.8
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
.++|||..++.+++++|. ++|++|||+ .+|+.+++++|+..+...++....+... ..|+++++++.+|.+++
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~iGDs-~~Di~aa~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVMIGDG-ATDLEARKPGGADLFIGYGGVQVREAVA-----AKADWFVTDFQDLIEVL 223 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEEEeCC-HHHHHhhhcCCCCEEEecCCCccCHHHH-----hcCCEEECCHHHHHHhh
Confidence 467889999999999885 699999999 5999999998887665433332222222 46899999999998865
No 93
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.38 E-value=2.9e-12 Score=112.63 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=45.3
Q ss_pred CCCcHHHHHHHHHHc--CCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCCh
Q 016293 310 GKPSTFMMDYLANKF--GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL 362 (392)
Q Consensus 310 gKP~p~~~~~~~~~l--gv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~ 362 (392)
.||.+.+++.+.+.+ |++|++|+||||+ ..|+++|+++|+.++++.+|....
T Consensus 110 ~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs-~~di~aA~~aGi~~i~v~~g~~~~ 163 (174)
T TIGR01685 110 AKQLEMILQKVNKVDPSVLKPAQILFFDDR-TDNVREVWGYGVTSCYCPSGMDKG 163 (174)
T ss_pred HHHHHHHHHHhhhcccCCCCHHHeEEEcCh-hHhHHHHHHhCCEEEEcCCCccHH
Confidence 467777788887777 8999999999999 599999999999999999987543
No 94
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.38 E-value=4e-12 Score=112.47 Aligned_cols=97 Identities=20% Similarity=0.144 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+|+||..... . ......+...+++.+..... ...+||+|..|+.+++++|++|++|+
T Consensus 87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~-~~~~~~~l~~~f~~i~~~~~---~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 87 LPGVEPLLEALRARGKKLALLTNSPRDH-A-VLVQELGLRDLFDVVIFSGD---VGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHH-H-HHHHhcCCHHHCCEEEEcCC---CCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 3456667777776555578889887643 1 11111344444555444333 33589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEE
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLV 355 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V 355 (392)
+|||+ ..|+++|+++|+.+|+|
T Consensus 162 ~vgD~-~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDS-PAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEcCC-HHHHHHHHHcCCEEEeC
Confidence 99999 59999999999999985
No 95
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.37 E-value=1.2e-11 Score=120.14 Aligned_cols=55 Identities=22% Similarity=0.299 Sum_probs=48.8
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhh
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM 364 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~ 364 (392)
.+||+|.+++.+++++++++++++||||+ .+|+++|+++|+++|+|.......++
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs-~sDi~aAk~aGi~~I~v~~~~~~~~~ 156 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGDR-ETDVQLAENMGIKGIRYARETLNWDA 156 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHCCCeEEEEECCCCCHHH
Confidence 48999999999999999999999999999 69999999999999999664444433
No 96
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.37 E-value=2.3e-12 Score=112.38 Aligned_cols=98 Identities=22% Similarity=0.222 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++.+.+.+..++..+...+++||.+.... .......+...+++.+....... ..||+|.+|+.+++.+|++|++|+
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~-~~~l~~~~~~~~f~~i~~~~~~~---~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRERI-ERVLERLGLDDYFDEIISSDDVG---SRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHHH-HHHHHHTTHGGGCSEEEEGGGSS---SSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred hhhhhhhhhhcccccceeEEeecCCcccc-cccccccccccccccccccchhh---hhhhHHHHHHHHHHHcCCCcceEE
Confidence 45567778888766667788898875322 22222334445566655544433 389999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEE
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLV 355 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V 355 (392)
+|||++ .|+++|+++|+.+|+|
T Consensus 155 ~vgD~~-~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 155 FVGDSP-SDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEESSH-HHHHHHHHTTSEEEEE
T ss_pred EEeCCH-HHHHHHHHcCCeEEeC
Confidence 999995 9999999999999987
No 97
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.36 E-value=6.7e-12 Score=109.99 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=51.1
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECC------hhhH
Q 016293 311 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK------ISDF 384 (392)
Q Consensus 311 KP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~s------l~el 384 (392)
||+|..++.+++++|+++++|++|||+ .||++|++.+|+..+. +... +.++ ..+++++.+ +.++
T Consensus 81 kpkp~~~~~~~~~l~~~~~ev~~iGD~-~nDi~~~~~ag~~~am---~nA~-~~lk-----~~A~~I~~~~~~~g~v~e~ 150 (169)
T TIGR02726 81 KKKTEPYAQMLEEMNISDAEVCYVGDD-LVDLSMMKRVGLAVAV---GDAV-ADVK-----EAAAYVTTARGGHGAVREV 150 (169)
T ss_pred CCCHHHHHHHHHHcCcCHHHEEEECCC-HHHHHHHHHCCCeEEC---cCch-HHHH-----HhCCEEcCCCCCCCHHHHH
Confidence 688999999999999999999999999 5999999999954443 4333 3443 247777753 3455
Q ss_pred HHhH
Q 016293 385 LSLK 388 (392)
Q Consensus 385 ~~~~ 388 (392)
.+.+
T Consensus 151 ~e~i 154 (169)
T TIGR02726 151 AELI 154 (169)
T ss_pred HHHH
Confidence 5543
No 98
>PLN02382 probable sucrose-phosphatase
Probab=99.33 E-value=6.5e-11 Score=118.22 Aligned_cols=205 Identities=16% Similarity=0.106 Sum_probs=117.0
Q ss_pred cEEEEEccCceecCC---eeCCCHHHHH-HHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccc
Q 016293 84 ETFIFDCDGVIWKGD---KLIDGVPETL-DMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFH 159 (392)
Q Consensus 84 k~vifDlDGTL~d~~---~~~~~~~eal-~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~ 159 (392)
-+|+.||||||+++. ++.+...+++ ++++++|+.++++| ||+...+...++.+++..+ ..+|++||+
T Consensus 10 ~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~gi~fv~aT---GR~~~~~~~l~~~~~l~~p------~~~I~~nGt 80 (413)
T PLN02382 10 LMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHDSLLVFST---GRSPTLYKELRKEKPLLTP------DITIMSVGT 80 (413)
T ss_pred EEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCCeeEEEEc---CCCHHHHHHHHHhCCCCCC------CEEEEcCCc
Confidence 378889999999852 3443455555 88999999999999 9999999988888887654 468888998
Q ss_pred cCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCCCCCCcccccCCCccccCCCC
Q 016293 160 RIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKD 239 (392)
Q Consensus 160 ~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (392)
.+..... +..+..+ ..++.. .. + .....+.+. +++... . . .+..+.
T Consensus 81 ~I~~~~~--~~~d~~w------~~~l~~-~w------~---~~~v~~~~~--~~~~l~-~---------q----~~~~~~ 126 (413)
T PLN02382 81 EIAYGES--MVPDHGW------VEYLNK-KW------D---REIVVEETS--KFPELK-L---------Q----PETEQR 126 (413)
T ss_pred EEEeCCC--CccChhH------HHHHhc-cC------C---hhhHHHHHh--cCCCcc-c---------C----CcccCC
Confidence 8764221 1111111 123321 11 0 111122221 221100 0 0 001223
Q ss_pred ccEEEEEeccCCCHHHHHHHHH-HHHhCC-CcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHH
Q 016293 240 VGAVVVGFDRYFNYYKVQYGTL-CIRENP-GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMM 317 (392)
Q Consensus 240 ~~~v~~~~d~~~~~~~~~~~~~-~l~~~~-g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~ 317 (392)
+.++.+..+.. ........+. .+.... ...++.++.. ..+....+-.|..++
T Consensus 127 ~~Ki~~~~~~~-~~~~~~~~l~~~~~~~g~~~~i~~s~~~-------------------------~ldI~p~g~sKg~Al 180 (413)
T PLN02382 127 PHKVSFYVDKK-KAQEVIKELSERLEKRGLDVKIIYSGGI-------------------------DLDVLPQGAGKGQAL 180 (413)
T ss_pred CeEEEEEechH-HhHHHHHHHHHHHHhcCCcEEEEEECCc-------------------------EEEEEeCCCCHHHHH
Confidence 33333322211 1111111111 111100 1122222111 112333467789999
Q ss_pred HHHHHHc---CCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 318 DYLANKF---GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 318 ~~~~~~l---gv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
+++++++ |++++++++|||+ .||++|.+.+|..+|.+.++
T Consensus 181 ~~L~~~~~~~gi~~~~~iafGDs-~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 181 AYLLKKLKAEGKAPVNTLVCGDS-GNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred HHHHHHhhhcCCChhcEEEEeCC-HHHHHHHhcCCCCEEEEcCC
Confidence 9999999 9999999999999 79999999999777777654
No 99
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.29 E-value=2e-11 Score=117.13 Aligned_cols=49 Identities=16% Similarity=0.118 Sum_probs=46.0
Q ss_pred CCCcHHHHHHHHHHcCC-CCCcEEEEcCCchhhHHHHHHcCCeEEEEecCC
Q 016293 310 GKPSTFMMDYLANKFGI-QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV 359 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv-~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~ 359 (392)
+||+|..++.++++++. ++++|+||||+ .+|+++|+++|+.+|+|.||-
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~-~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDR-DQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCc-HHHHHHHHHhCCeEEEecCCC
Confidence 79999999999999998 57999999999 699999999999999999874
No 100
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.25 E-value=1.6e-10 Score=111.58 Aligned_cols=70 Identities=14% Similarity=0.176 Sum_probs=55.8
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEEC--ChhhHHH
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFLS 386 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~--sl~el~~ 386 (392)
.+|||++.++.+++++|+++++|++|||+ .||+.|++.||+..++ . ..+.++ ..++++++ ++..++-
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg-~NDl~m~~~AGlgiA~--n---Akp~Vk-----~~Ad~~i~~~~l~~~l~ 313 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDG-ANDLPMIKAAGLGIAY--H---AKPKVN-----EQAQVTIRHADLMGVLC 313 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECC-HHHHHHHHHCCCeEEe--C---CCHHHH-----hhCCEEecCcCHHHHHH
Confidence 46999999999999999999999999999 5999999999976654 2 223444 35788876 6777776
Q ss_pred hHH
Q 016293 387 LKA 389 (392)
Q Consensus 387 ~~~ 389 (392)
++.
T Consensus 314 ~~~ 316 (322)
T PRK11133 314 ILS 316 (322)
T ss_pred Hhc
Confidence 554
No 101
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.25 E-value=6.4e-11 Score=102.87 Aligned_cols=48 Identities=23% Similarity=0.359 Sum_probs=41.7
Q ss_pred hcCcEEEEEccCcee--cCCeeCCCHHHHHHHHHHCCCc--EEEEeCCCCCC
Q 016293 81 DSVETFIFDCDGVIW--KGDKLIDGVPETLDMLRSKGKR--LVFVTNNSTKS 128 (392)
Q Consensus 81 ~~ik~vifDlDGTL~--d~~~~~~~~~eal~~l~~~Gi~--~~i~Tn~~gr~ 128 (392)
..||+++||.|+||. +...+.|+..++++++++.+.. ++|+||++|..
T Consensus 39 ~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~ 90 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSS 90 (168)
T ss_pred cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcc
Confidence 589999999999995 5777888999999999998875 99999987553
No 102
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.24 E-value=6.6e-10 Score=103.59 Aligned_cols=71 Identities=14% Similarity=-0.065 Sum_probs=59.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc-------CCeEEEEecCCCChhhccCCCCCCCCcEEECChh
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG-------GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 382 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~a-------G~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~ 382 (392)
+-.|+.+++.+++++++.++++++|||+ .||+.|++.+ |..++.|.+|. .+ ..++|++++..
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~-~~D~~~~~~~~~~~~~~g~~~v~v~~g~-----~~-----~~A~~~~~~~~ 233 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDD-ITDEDAFRVVNNQWGNYGFYPVPIGSGS-----KK-----TVAKFHLTGPQ 233 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCC-CcHHHHHHHHhcccCCCCeEEEEEecCC-----cC-----CCceEeCCCHH
Confidence 4456889999999999999999999999 6999999999 77788887542 11 45899999999
Q ss_pred hHHHhHHhh
Q 016293 383 DFLSLKAAA 391 (392)
Q Consensus 383 el~~~~~~~ 391 (392)
++.+++..+
T Consensus 234 ~v~~~L~~l 242 (244)
T TIGR00685 234 QVLEFLGLL 242 (244)
T ss_pred HHHHHHHHH
Confidence 999988764
No 103
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.22 E-value=7.6e-11 Score=106.16 Aligned_cols=86 Identities=17% Similarity=0.162 Sum_probs=61.0
Q ss_pred HHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEEEEcC
Q 016293 257 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGD 336 (392)
Q Consensus 257 ~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi~IGD 336 (392)
.+.+..++..+...+|+||...... .......+...+++.+..... ... ||+|..|..+++++|+++++|++|||
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~~-~~~l~~~gl~~~f~~~~~~~~---~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD 186 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKDA-AKFLTTHGLEILFPVQIWMED---CPP-KPNPEPLILAAKALGVEACHAAMVGD 186 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHHH-HHHHHHcCchhhCCEEEeecC---CCC-CcCHHHHHHHHHHhCcCcccEEEEeC
Confidence 5566677665556789999876432 222233444444544444332 223 99999999999999999999999999
Q ss_pred CchhhHHHHHHc
Q 016293 337 RLDTDILFGQNG 348 (392)
Q Consensus 337 ~l~nDI~ma~~a 348 (392)
+ .+|+++|+++
T Consensus 187 ~-~~Di~aA~~a 197 (197)
T TIGR01548 187 T-VDDIITGRKA 197 (197)
T ss_pred C-HHHHHHHHhC
Confidence 9 5999999875
No 104
>PLN02423 phosphomannomutase
Probab=99.22 E-value=5.5e-11 Score=110.88 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=52.5
Q ss_pred cCcEEE-EEccCceecCCe-eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhC-Cceeeccccccceeeeccc
Q 016293 82 SVETFI-FDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL-GLTVTEVKDSFLSIVCLKF 158 (392)
Q Consensus 82 ~ik~vi-fDlDGTL~d~~~-~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~l-gl~~~~~~~~f~~~i~~~~ 158 (392)
++++++ |||||||++++. +.+.+.++|++|+++ ++++++| ||....+...+... ... +.++|+.||
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-i~fviaT---GR~~~~~~~~~~~~~~~~-------~~~~I~~NG 73 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-VTVGVVG---GSDLSKISEQLGKTVIND-------YDYVFSENG 73 (245)
T ss_pred ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-CEEEEEC---CcCHHHHHHHhccccccc-------CCEEEECCc
Confidence 455554 999999998665 556799999999987 9999999 89888777766542 211 234677777
Q ss_pred ccCCC
Q 016293 159 HRIPS 163 (392)
Q Consensus 159 ~~~~~ 163 (392)
+...+
T Consensus 74 a~i~~ 78 (245)
T PLN02423 74 LVAHK 78 (245)
T ss_pred eEEEe
Confidence 77663
No 105
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.20 E-value=1.7e-10 Score=103.64 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=40.4
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 311 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 311 KP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
++++..++.+++++|+++++|++|||+ .+|+++++.+|+..+....+
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs-~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDS-KNDLPMFEVADISISLGDEG 192 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCC-HhHHHHHHhcCCeEEECCCc
Confidence 456678999999999999999999999 69999999999977665544
No 106
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.18 E-value=7.7e-11 Score=101.61 Aligned_cols=87 Identities=18% Similarity=0.148 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEEEE
Q 016293 255 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 334 (392)
Q Consensus 255 ~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi~I 334 (392)
.+.+.+..++..+...+|+||............. ...++..+.. .+... +||+|.+|+.+++++|+++ +|++|
T Consensus 68 g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~~~f~~i~~---~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~i 140 (154)
T TIGR01549 68 GAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LGDYFDLILG---SDEFG-AKPEPEIFLAALESLGLPP-EVLHV 140 (154)
T ss_pred CHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HHhcCcEEEe---cCCCC-CCcCHHHHHHHHHHcCCCC-CEEEE
Confidence 3566666776554557888888754322111111 2223333332 33334 8999999999999999999 99999
Q ss_pred cCCchhhHHHHHHcC
Q 016293 335 GDRLDTDILFGQNGG 349 (392)
Q Consensus 335 GD~l~nDI~ma~~aG 349 (392)
||+ ..|+++|+++|
T Consensus 141 GDs-~~Di~aa~~aG 154 (154)
T TIGR01549 141 GDN-LNDIEGARNAG 154 (154)
T ss_pred eCC-HHHHHHHHHcc
Confidence 999 69999999987
No 107
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.18 E-value=3.2e-10 Score=103.70 Aligned_cols=101 Identities=11% Similarity=-0.012 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccc--cCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCc
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEW--AGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ 330 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~e 330 (392)
|+.+.+.+..++......+|+||............. .++..++..+... ....||+|+.|..+++++|++|++
T Consensus 97 ypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-----~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 97 YPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-----TVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-----CcccCCCHHHHHHHHHHhCcChhH
Confidence 666788888888755567899998753211110000 0111222222111 122699999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEecCC
Q 016293 331 ICMVGDRLDTDILFGQNGGCKTLLVLSGV 359 (392)
Q Consensus 331 vi~IGD~l~nDI~ma~~aG~~~i~V~~G~ 359 (392)
|++|||+ ..|+++|+++|+.+|++.++.
T Consensus 172 ~lfVgDs-~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 172 ILFLSDI-INELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred EEEEeCC-HHHHHHHHHcCCEEEEEECCC
Confidence 9999999 699999999999999998754
No 108
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.17 E-value=3.4e-10 Score=104.41 Aligned_cols=45 Identities=20% Similarity=0.216 Sum_probs=36.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCCh
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL 362 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~ 362 (392)
.||++. .+++++|+ ++||||+ .+||.+|+++|+++|.|.||++..
T Consensus 173 ~Kp~~~---~~l~~~~i----~i~vGDs-~~DI~aAk~AGi~~I~V~~g~~s~ 217 (237)
T TIGR01672 173 YQYTKT---QWIQDKNI----RIHYGDS-DNDITAAKEAGARGIRILRASNST 217 (237)
T ss_pred CCCCHH---HHHHhCCC----eEEEeCC-HHHHHHHHHCCCCEEEEEecCCCC
Confidence 455553 35566776 7999999 699999999999999999998753
No 109
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.08 E-value=2.3e-09 Score=114.99 Aligned_cols=70 Identities=13% Similarity=0.020 Sum_probs=54.9
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
.+-.|+.+++.+++ +++++.+++|||+ .||++|.+.++-..+.|..|... ..++|++++.+|+++++
T Consensus 654 ~~vnKG~al~~ll~--~~~~d~vl~~GD~-~nDe~Mf~~~~~~~~~v~vG~~~----------s~A~~~l~~~~eV~~~L 720 (726)
T PRK14501 654 AGVNKGRAVRRLLE--AGPYDFVLAIGDD-TTDEDMFRALPETAITVKVGPGE----------SRARYRLPSQREVRELL 720 (726)
T ss_pred CCCCHHHHHHHHHh--cCCCCEEEEECCC-CChHHHHHhcccCceEEEECCCC----------CcceEeCCCHHHHHHHH
Confidence 46678999999998 7888999999999 59999999985444555555421 34789999999988887
Q ss_pred Hhh
Q 016293 389 AAA 391 (392)
Q Consensus 389 ~~~ 391 (392)
..+
T Consensus 721 ~~l 723 (726)
T PRK14501 721 RRL 723 (726)
T ss_pred HHH
Confidence 754
No 110
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.07 E-value=2.3e-09 Score=98.92 Aligned_cols=37 Identities=27% Similarity=0.402 Sum_probs=32.3
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCC
Q 016293 320 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS 361 (392)
Q Consensus 320 ~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~ 361 (392)
+++++|+ +++|||+ .+|+.+|++||+++|.|.||++.
T Consensus 180 ~l~~~~i----~I~IGDs-~~Di~aA~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 180 WLKKKNI----RIFYGDS-DNDITAAREAGARGIRILRAANS 216 (237)
T ss_pred HHHhcCC----eEEEcCC-HHHHHHHHHcCCcEEEEecCCCC
Confidence 4556665 9999999 69999999999999999999864
No 111
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.07 E-value=2.1e-10 Score=101.05 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=52.6
Q ss_pred EEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc
Q 016293 270 LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 348 (392)
Q Consensus 270 ~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~a 348 (392)
.+|+||....... ......+...+++.+.+ .+.....||+|++|+.+++++|++|++|+||||+ ..|+.+|+++
T Consensus 102 ~~i~Tn~~~~~~~-~~l~~~~l~~~fd~v~~---~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~-~~Di~~A~~~ 175 (175)
T TIGR01493 102 VAILSNASHWAFD-QFAQQAGLPWYFDRAFS---VDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAH-QWDLIGARKF 175 (175)
T ss_pred HhhhhCCCHHHHH-HHHHHCCCHHHHhhhcc---HhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecC-hhhHHHHhcC
Confidence 4588888764322 12223344444444333 3333458999999999999999999999999999 6999999864
No 112
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.06 E-value=1.1e-09 Score=111.66 Aligned_cols=47 Identities=28% Similarity=0.396 Sum_probs=40.4
Q ss_pred hcCcEEEEEccCceecCC-------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCC
Q 016293 81 DSVETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNNSTK 127 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~-------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr 127 (392)
.+.|+++||+||||..++ -++|++.++|+.|++.|++++|+||.++.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI 225 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGI 225 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCccc
Confidence 457899999999998643 25799999999999999999999996653
No 113
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.04 E-value=5.7e-10 Score=93.50 Aligned_cols=103 Identities=17% Similarity=0.317 Sum_probs=75.5
Q ss_pred cEEEEEccCceecCC-------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCC-------cee
Q 016293 84 ETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLG-------LTV 143 (392)
Q Consensus 84 k~vifDlDGTL~d~~-------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lg-------l~~ 143 (392)
|+++||+|||||++. .+++++.+.|+.|+++|++++++||+ .........++.++ +..
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~--~~~~~~~~~l~~~~~~~~i~~l~~ 78 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYN--DDPHVAYELLKIFEDFGIIFPLAE 78 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCC--CCHHHHHHHHHhccccccchhhHh
Confidence 689999999999873 15789999999999999999999963 24455556667777 555
Q ss_pred eccccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcC--CCCCCEEEEEeCcchHHHHH
Q 016293 144 TEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSID--FPKDKKVYVVGEDGILKELE 209 (392)
Q Consensus 144 ~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~--~~~~~~~~v~~~~~~~~~l~ 209 (392)
. |..+++.... |+| +.+. ..+++++ +.++.+++++++...+++.+
T Consensus 79 ~-----f~~~~~~~~~----pkp-----~~~~-------~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 79 Y-----FDPLTIGYWL----PKS-----PRLV-------EIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred h-----hhhhhhcCCC----cHH-----HHHH-------HHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 4 6667665432 332 3333 6777778 88899999998877665554
No 114
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.02 E-value=1.6e-09 Score=97.93 Aligned_cols=126 Identities=10% Similarity=-0.060 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCC-ccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 254 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE-PLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 254 ~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
+.+.+.+..+++. ...+|+||........ .....+...++.......... .....++.|.....+++.++..+++|+
T Consensus 71 pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~-~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~~v 148 (205)
T PRK13582 71 PGAVEFLDWLRER-FQVVILSDTFYEFAGP-LMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYRVI 148 (205)
T ss_pred CCHHHHHHHHHhc-CCEEEEeCCcHHHHHH-HHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCeEE
Confidence 3455566666655 5567777776533221 111222222222111110000 000012333344566667777789999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcE-EECChhhHHHhHHhh
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF-YTNKISDFLSLKAAA 391 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~-v~~sl~el~~~~~~~ 391 (392)
||||+ .+|++|++++|+.. ++ +. ..+... ..|++ +++++.||++++..+
T Consensus 149 ~iGDs-~~D~~~~~aa~~~v-~~--~~-~~~~~~-----~~~~~~~~~~~~el~~~l~~~ 198 (205)
T PRK13582 149 AAGDS-YNDTTMLGEADAGI-LF--RP-PANVIA-----EFPQFPAVHTYDELLAAIDKA 198 (205)
T ss_pred EEeCC-HHHHHHHHhCCCCE-EE--CC-CHHHHH-----hCCcccccCCHHHHHHHHHHH
Confidence 99999 69999999999743 32 22 222222 24565 899999999877643
No 115
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.00 E-value=1e-09 Score=97.18 Aligned_cols=88 Identities=22% Similarity=0.160 Sum_probs=71.2
Q ss_pred EEEEecCCccccccccccccCCCccceeeecccCCC---ccccCCCcHHHHHHHHHHcCCC-CCcEEEEcCCchhhHHHH
Q 016293 270 LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE---PLVVGKPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFG 345 (392)
Q Consensus 270 ~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~gKP~p~~~~~~~~~lgv~-~~evi~IGD~l~nDI~ma 345 (392)
+.+.||.+.... ...+...|....++.+.+..-.. ...+.||.+.+|+.+.+..|+. |.++++|.|+ .+.|+.|
T Consensus 117 k~~FTNa~k~HA-~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS-~~NI~~a 194 (244)
T KOG3109|consen 117 KWIFTNAYKVHA-IRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDS-ERNIQTA 194 (244)
T ss_pred EEEecCCcHHHH-HHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCc-hhhHHHH
Confidence 788999998543 33445566666666665544433 4678999999999999999998 9999999999 7999999
Q ss_pred HHcCCeEEEEecCC
Q 016293 346 QNGGCKTLLVLSGV 359 (392)
Q Consensus 346 ~~aG~~~i~V~~G~ 359 (392)
++.|+.+++|+...
T Consensus 195 k~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 195 KEVGLKTVLVGREH 208 (244)
T ss_pred HhccceeEEEEeee
Confidence 99999999998754
No 116
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.00 E-value=2.7e-09 Score=99.65 Aligned_cols=202 Identities=19% Similarity=0.233 Sum_probs=108.4
Q ss_pred cEEEEEccCceecCC-eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCC
Q 016293 84 ETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIP 162 (392)
Q Consensus 84 k~vifDlDGTL~d~~-~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~ 162 (392)
+++++|+||||+++. .......+.++...+.++.++++| ||+...+.+.++..++..+ +++||.+|+.+.
T Consensus 3 ~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~~~~~~v~~T---GRs~~~~~~~~~~~~l~~P------d~~I~svGt~I~ 73 (247)
T PF05116_consen 3 RLLASDLDGTLIDGDDEALARLEELLEQQARPEILFVYVT---GRSLESVLRLLREYNLPQP------DYIITSVGTEIY 73 (247)
T ss_dssp EEEEEETBTTTBHCHHHHHHHHHHHHHHHHCCGEEEEEE----SS-HHHHHHHHHHCT-EE-------SEEEETTTTEEE
T ss_pred EEEEEECCCCCcCCCHHHHHHHHHHHHHhhCCCceEEEEC---CCCHHHHHHHHHhCCCCCC------CEEEecCCeEEE
Confidence 589999999999322 223333444444557789999999 9999999999999998654 689999999887
Q ss_pred CCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHc-CCceecCCCCCCcccccCCCccccCCCCcc
Q 016293 163 SPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELA-GFQYLGGPEDGGKKIELKPGFLMEHDKDVG 241 (392)
Q Consensus 163 ~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (392)
... ....+.-| .+.+.. +.. .....+.+... ++..- +. ..+.+-
T Consensus 74 ~~~--~~~~d~~w------~~~i~~-~w~---------~~~v~~~l~~~~~l~~q--~~---------------~~q~~~ 118 (247)
T PF05116_consen 74 YGE--NWQPDEEW------QAHIDE-RWD---------RERVEEILAELPGLRPQ--PE---------------SEQRPF 118 (247)
T ss_dssp ESS--TTEE-HHH------HHHHHT-T-----------HHHHHHHHHCHCCEEEG--GC---------------CCGCCT
T ss_pred EcC--CCcChHHH------HHHHHh-cCC---------hHHHHHHHHHhhCcccC--Cc---------------cccCCe
Confidence 622 12223322 122221 110 01222222221 11110 00 000111
Q ss_pred EEEEEeccCCCHHH-HHHHHHHHHhCCCcE--EEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHH
Q 016293 242 AVVVGFDRYFNYYK-VQYGTLCIRENPGCL--FIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMD 318 (392)
Q Consensus 242 ~v~~~~d~~~~~~~-~~~~~~~l~~~~g~~--~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~ 318 (392)
++-...+.. .... +......++ ..+.. ++.+|... .+....+-.|..+++
T Consensus 119 k~sy~~~~~-~~~~~~~~i~~~l~-~~~l~~~~i~s~~~~-------------------------ldilP~~a~K~~Al~ 171 (247)
T PF05116_consen 119 KISYYVDPD-DSADILEEIRARLR-QRGLRVNVIYSNGRD-------------------------LDILPKGASKGAALR 171 (247)
T ss_dssp CECEEEETT-SHCHHHHHHHHHHH-CCTCEEEEEECTCCE-------------------------EEEEETT-SHHHHHH
T ss_pred eEEEEEecc-cchhHHHHHHHHHH-HcCCCeeEEEcccee-------------------------EEEccCCCCHHHHHH
Confidence 111111111 1112 222222232 23432 33333221 112223556799999
Q ss_pred HHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 319 YLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 319 ~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
++++++++++++++++||+ .||+.|. ..+..+|.|.+.
T Consensus 172 ~L~~~~~~~~~~vl~aGDS-gND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 172 YLMERWGIPPEQVLVAGDS-GNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp HHHHHHT--GGGEEEEESS-GGGHHHH-CCSSEEEE-TTS
T ss_pred HHHHHhCCCHHHEEEEeCC-CCcHHHH-cCcCCEEEEcCC
Confidence 9999999999999999999 6999999 777899988873
No 117
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.96 E-value=3.2e-09 Score=92.32 Aligned_cols=44 Identities=30% Similarity=0.422 Sum_probs=34.4
Q ss_pred cCCCcHHHHHHHHHHcC----CCCCcEEEEcCC----------chhhHHHHHHcCCeE
Q 016293 309 VGKPSTFMMDYLANKFG----IQKSQICMVGDR----------LDTDILFGQNGGCKT 352 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lg----v~~~evi~IGD~----------l~nDI~ma~~aG~~~ 352 (392)
+.||.+-+++.+++.++ ++.++++||||+ ...|...|.++|++.
T Consensus 95 ~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 95 CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 48999999999999987 489999999994 148999999999864
No 118
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.95 E-value=3.5e-09 Score=97.00 Aligned_cols=65 Identities=12% Similarity=0.004 Sum_probs=48.0
Q ss_pred HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 318 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 318 ~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
..++++++..+++|++|||+ .+|+.+|++||+..+ . +.- .+..+ ....|.+.++++.|+.+.+..
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs-~~Di~aa~~Ag~~~a--~-~~l-~~~~~---~~~~~~~~~~~f~ei~~~l~~ 214 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDS-ITDLEAAKQADKVFA--R-DFL-ITKCE---ELGIPYTPFETFHDVQTELKH 214 (219)
T ss_pred HHHHHHhccCCCCEEEEeCC-HHHHHHHHHCCccee--H-HHH-HHHHH---HcCCCccccCCHHHHHHHHHH
Confidence 46888999999999999999 699999999998332 2 211 11111 124578889999999887764
No 119
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.92 E-value=7.1e-09 Score=111.81 Aligned_cols=55 Identities=22% Similarity=0.363 Sum_probs=47.0
Q ss_pred cCcEEEEEccCceecCC----eeCCCHHHHHHHH-HHCCCcEEEEeCCCCCCHHHHHHhhHhC
Q 016293 82 SVETFIFDCDGVIWKGD----KLIDGVPETLDML-RSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~----~~~~~~~eal~~l-~~~Gi~~~i~Tn~~gr~~~~~~~~l~~l 139 (392)
+.++|++|+||||+... .+.++..+.|++| +..|..++|+| ||....+.+.|...
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS---GR~~~~L~~~f~~~ 654 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS---ARSRKTLADWFSPC 654 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe---CCCHHHHHHHhCCC
Confidence 68899999999999643 4456799999998 77899999999 99999999998654
No 120
>PTZ00445 p36-lilke protein; Provisional
Probab=98.90 E-value=7.1e-09 Score=92.30 Aligned_cols=49 Identities=14% Similarity=0.243 Sum_probs=45.6
Q ss_pred cCCCcHHH--H--HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 309 VGKPSTFM--M--DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 309 ~gKP~p~~--~--~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
.-||.|.. | +.+++++|+.|+||++|.|. ...+++|++.|+.++.+..+
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~-~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDD-MNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCC-HHHHHHHHHCCCEEEEcCCh
Confidence 37999999 8 99999999999999999999 59999999999999999764
No 121
>PLN03017 trehalose-phosphatase
Probab=98.87 E-value=3.1e-07 Score=89.36 Aligned_cols=71 Identities=14% Similarity=0.065 Sum_probs=52.9
Q ss_pred CCCcHHHHHHHHHHcCCCC---CcEEEEcCCchhhHHHHHHcC----CeEEEEecCCCChhhccCCCCCCCCcEEECChh
Q 016293 310 GKPSTFMMDYLANKFGIQK---SQICMVGDRLDTDILFGQNGG----CKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 382 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~---~evi~IGD~l~nDI~ma~~aG----~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~ 382 (392)
+-.|+.+++.+++.+|... .-+++|||. .+|-.|.+.+. --+|.|.. ... . ..+.|.+.+..
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD-~TDEDaF~~L~~~~~G~gI~VG~--~~k-~-------T~A~y~L~dp~ 349 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDD-RTDEDAFKMLRDRGEGFGILVSK--FPK-D-------TDASYSLQDPS 349 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCC-CccHHHHHHHhhcCCceEEEECC--CCC-C-------CcceEeCCCHH
Confidence 4567899999999998763 348999999 59999999773 23455542 111 1 35799999999
Q ss_pred hHHHhHHhh
Q 016293 383 DFLSLKAAA 391 (392)
Q Consensus 383 el~~~~~~~ 391 (392)
|+.+++..+
T Consensus 350 eV~~fL~~L 358 (366)
T PLN03017 350 EVMDFLARL 358 (366)
T ss_pred HHHHHHHHH
Confidence 999988765
No 122
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.85 E-value=1.2e-08 Score=98.92 Aligned_cols=41 Identities=10% Similarity=0.032 Sum_probs=37.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCe
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 351 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~ 351 (392)
.||+|..+..+++++|+.+++++||||+ ..|+.++++++-.
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~-~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDN-PAERANVKITLPV 125 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCC-HHHHHHHHHHCCC
Confidence 5899999999999999999999999999 5999999997753
No 123
>PLN02580 trehalose-phosphatase
Probab=98.84 E-value=5.9e-07 Score=88.13 Aligned_cols=70 Identities=16% Similarity=0.106 Sum_probs=54.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCc---EEEEcCCchhhHHHHHHc-----CCeEEEEecCCCChhhccCCCCCCCCcEEECCh
Q 016293 310 GKPSTFMMDYLANKFGIQKSQ---ICMVGDRLDTDILFGQNG-----GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI 381 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~e---vi~IGD~l~nDI~ma~~a-----G~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl 381 (392)
+-.|+.+++.+++++|++..+ +++|||. .||..|.+.+ | .+|.|..+. . . ..+.|.+.+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD-~TDedmF~~L~~~~~G-~~I~Vgn~~--~-~-------t~A~y~L~dp 366 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDD-RTDEDAFKVLREGNRG-YGILVSSVP--K-E-------SNAFYSLRDP 366 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCC-chHHHHHHhhhccCCc-eEEEEecCC--C-C-------ccceEEcCCH
Confidence 557799999999999998764 3899999 6999999963 4 345554432 1 1 3579999999
Q ss_pred hhHHHhHHhh
Q 016293 382 SDFLSLKAAA 391 (392)
Q Consensus 382 ~el~~~~~~~ 391 (392)
.|+.+++..+
T Consensus 367 ~eV~~~L~~L 376 (384)
T PLN02580 367 SEVMEFLKSL 376 (384)
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 124
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.83 E-value=9e-09 Score=96.43 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=67.2
Q ss_pred hhcCcEEEEEccCceecCCee----CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeee
Q 016293 80 IDSVETFIFDCDGVIWKGDKL----IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVC 155 (392)
Q Consensus 80 ~~~ik~vifDlDGTL~d~~~~----~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~ 155 (392)
+...++|+|||||||++.... .|++.++|++|+++|++++|+| ++....+...++.+|+..+ |..++|
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaT---S~~Re~v~~~L~~lGLd~Y-----FdvIIs 194 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWS---YGDRDHVVESMRKVKLDRY-----FDIIIS 194 (301)
T ss_pred cccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEE---CCCHHHHHHHHHHcCCCcc-----cCEEEE
Confidence 456889999999999987653 4899999999999999999999 4566777789999999987 888888
Q ss_pred cccccCCCCCC
Q 016293 156 LKFHRIPSPNS 166 (392)
Q Consensus 156 ~~~~~~~~~~~ 166 (392)
..+....+|.+
T Consensus 195 ~Gdv~~~kp~~ 205 (301)
T TIGR01684 195 GGHKAEEYSTM 205 (301)
T ss_pred CCccccCCCCc
Confidence 87777777765
No 125
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.81 E-value=1.2e-08 Score=85.85 Aligned_cols=110 Identities=20% Similarity=0.280 Sum_probs=90.0
Q ss_pred HHhhcCcEEEEEccCceecCCeeCCCH-----------HHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecc
Q 016293 78 ELIDSVETFIFDCDGVIWKGDKLIDGV-----------PETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEV 146 (392)
Q Consensus 78 ~~~~~ik~vifDlDGTL~d~~~~~~~~-----------~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~ 146 (392)
+.+.+||+++||+||||+|+.-.+... --.|+.+.+.|+++.|+| ||...-+..+.+.||+..-
T Consensus 3 ~ra~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIIT---Gr~s~ive~Ra~~LGI~~~-- 77 (170)
T COG1778 3 ARAKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIIT---GRDSPIVEKRAKDLGIKHL-- 77 (170)
T ss_pred hhhhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEe---CCCCHHHHHHHHHcCCcee--
Confidence 346789999999999999966443322 137899999999999999 8999999999999999844
Q ss_pred ccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 147 KDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 147 ~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
...+.....+..+.+++.++..+.+.|+++.-.++..+...|+++.
T Consensus 78 ------------------------~qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 78 ------------------------YQGISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred ------------------------eechHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 2344444566678899999999999999999889999999998874
No 126
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.81 E-value=2e-09 Score=97.50 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=58.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcE
Q 016293 252 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 331 (392)
Q Consensus 252 ~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~ev 331 (392)
.+++....+..|+...-...++|+....... ......|... ...+.... +||.+.+|..+++.|++++++|
T Consensus 128 ~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~-~~~~~lgi~~-~~v~a~~~-------~kP~~k~~~~~i~~l~~~~~~v 198 (215)
T PF00702_consen 128 LRPGAKEALQELKEAGIKVAILTGDNESTAS-AIAKQLGIFD-SIVFARVI-------GKPEPKIFLRIIKELQVKPGEV 198 (215)
T ss_dssp BHTTHHHHHHHHHHTTEEEEEEESSEHHHHH-HHHHHTTSCS-EEEEESHE-------TTTHHHHHHHHHHHHTCTGGGE
T ss_pred chhhhhhhhhhhhccCcceeeeecccccccc-cccccccccc-cccccccc-------ccccchhHHHHHHHHhcCCCEE
Confidence 3677888888888743335666655432211 1111223211 00111100 7999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcC
Q 016293 332 CMVGDRLDTDILFGQNGG 349 (392)
Q Consensus 332 i~IGD~l~nDI~ma~~aG 349 (392)
+||||++ ||+.|+++||
T Consensus 199 ~~vGDg~-nD~~al~~Ag 215 (215)
T PF00702_consen 199 AMVGDGV-NDAPALKAAG 215 (215)
T ss_dssp EEEESSG-GHHHHHHHSS
T ss_pred EEEccCH-HHHHHHHhCc
Confidence 9999995 9999999997
No 127
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.79 E-value=6.1e-08 Score=84.11 Aligned_cols=122 Identities=15% Similarity=0.149 Sum_probs=75.0
Q ss_pred EEEEEccCceecCC------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHH---HHhhHh---CCceeecc
Q 016293 85 TFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQY---GKKFET---LGLTVTEV 146 (392)
Q Consensus 85 ~vifDlDGTL~d~~------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~---~~~l~~---lgl~~~~~ 146 (392)
+|+||+||||+++. .+.+++.+++++++++|++++++| ||+...+ .++++. .|...+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~T---GRp~~~~~~t~~~l~~~~~~~~~lp-- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLT---ARPIGQADRTRSYLSQIKQDGHNLP-- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEc---CCcHHHHHHHHHHHHHhhhccccCC--
Confidence 48999999999865 567789999999999999999999 8888776 366766 232221
Q ss_pred ccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEE-EeC-cchHHHHHHcCCce
Q 016293 147 KDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYV-VGE-DGILKELELAGFQY 215 (392)
Q Consensus 147 ~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v-~~~-~~~~~~l~~~g~~~ 215 (392)
...+++.++..........+..+........+...++.+. ..+..++. .|+ ..+...+++.|++.
T Consensus 76 ---~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~-~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 76 ---HGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFP-PQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred ---CceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcC-CCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 1257888887775322211111111111222223332111 01223442 444 67889999999865
No 128
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.78 E-value=5.4e-08 Score=86.31 Aligned_cols=38 Identities=18% Similarity=0.159 Sum_probs=32.5
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCC
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC 350 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~ 350 (392)
.|.+|+..++.+.+++ +++|++|||+ .+|+.+|+.+++
T Consensus 146 ~g~~K~~~~~~~~~~~---~~~~i~iGD~-~~D~~aa~~~d~ 183 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPK---YQHIIYIGDG-VTDVCPAKLSDV 183 (188)
T ss_pred CCCCHHHHHHHHHhhc---CceEEEECCC-cchhchHhcCCc
Confidence 4667788899888765 7899999999 599999999864
No 129
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.71 E-value=7.1e-08 Score=88.06 Aligned_cols=64 Identities=13% Similarity=0.011 Sum_probs=45.1
Q ss_pred HHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 319 YLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 319 ~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
.++++++..+++|+||||+ .+|+.||+.||+ +++.. .- .+..++ ...|....+++.|+.+++.+
T Consensus 147 ~~l~~~~~~~~~~i~iGDg-~~D~~~a~~Ad~--~~ar~-~l-~~~~~~---~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 147 SLIRKLSEPNDYHIVIGDS-VTDVEAAKQSDL--CFARD-YL-LNECEE---LGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred HHHHHHhhcCCcEEEEeCC-HHHHHHHHhCCe--eEehH-HH-HHHHHH---cCCCccCcCCHHHHHHHHHH
Confidence 5667777788999999999 699999999997 44433 21 111111 13367778999999887764
No 130
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.64 E-value=1.4e-07 Score=84.99 Aligned_cols=45 Identities=16% Similarity=0.106 Sum_probs=40.3
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEE
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLL 354 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~ 354 (392)
.|++|...++.+++++++++++|+++||+ .+|++|++.+|...+.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs-~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDS-ISDLPLLSLVGHPYVV 196 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCC-cccHHHHHhCCCcEEe
Confidence 37888889999999999999999999999 5999999999976654
No 131
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.62 E-value=5e-07 Score=81.77 Aligned_cols=69 Identities=12% Similarity=-0.016 Sum_probs=45.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCc-EEECChhhHHHhH
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD-FYTNKISDFLSLK 388 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd-~v~~sl~el~~~~ 388 (392)
.+|.+......++..|. +|++|||+ .||+.|++.||+..++... +.+.+ .-|+ -++.+.+||++.+
T Consensus 129 ~~~~K~~~l~~l~~~~~---~~v~vGDs-~nDl~ml~~Ag~~ia~~ak-----~~~~~----~~~~~~~~~~~~~~~~~~ 195 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYY---RVIAAGDS-YNDTTMLSEAHAGILFHAP-----ENVIR----EFPQFPAVHTYEDLKREF 195 (203)
T ss_pred CcchHHHHHHHHHhhCC---CEEEEeCC-HHHHHHHHhCCCCEEecCC-----HHHHH----hCCCCCcccCHHHHHHHH
Confidence 34444444444466664 89999999 6999999999987776332 22221 1222 3578889999887
Q ss_pred Hhh
Q 016293 389 AAA 391 (392)
Q Consensus 389 ~~~ 391 (392)
.++
T Consensus 196 ~~~ 198 (203)
T TIGR02137 196 LKA 198 (203)
T ss_pred HHH
Confidence 765
No 132
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.60 E-value=3.4e-07 Score=83.41 Aligned_cols=44 Identities=20% Similarity=0.304 Sum_probs=38.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEE
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLL 354 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~ 354 (392)
++-|...++.+++.+|+++++++++||+ .||+.|.+.+|...+.
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs-~nDlpml~~ag~~ia~ 185 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDS-ANDLPMLEAAGLPIAV 185 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCc-hhhHHHHHhCCCCeEe
Confidence 4556777899999999999999999999 6999999999976555
No 133
>PLN02151 trehalose-phosphatase
Probab=98.58 E-value=8.3e-06 Score=79.21 Aligned_cols=71 Identities=11% Similarity=0.048 Sum_probs=51.8
Q ss_pred CCCcHHHHHHHHHHcCCCCC---cEEEEcCCchhhHHHHHHcCC----eEEEEecCCCChhhccCCCCCCCCcEEECChh
Q 016293 310 GKPSTFMMDYLANKFGIQKS---QICMVGDRLDTDILFGQNGGC----KTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 382 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~---evi~IGD~l~nDI~ma~~aG~----~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~ 382 (392)
+-.|+.+++.+++.++..-. -+++|||. .+|-.|.+.+.- -+|.|..+ .. +..+.|.+.+.+
T Consensus 267 ~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD-~TDEDaF~~L~~~~~G~gI~Vg~~--~k--------~T~A~y~L~dp~ 335 (354)
T PLN02151 267 KWDKGKALEFLLESLGYANCTDVFPIYIGDD-RTDEDAFKILRDKKQGLGILVSKY--AK--------ETNASYSLQEPD 335 (354)
T ss_pred CCCHHHHHHHHHHhcccccCCCCeEEEEcCC-CcHHHHHHHHhhcCCCccEEeccC--CC--------CCcceEeCCCHH
Confidence 44678999999999886532 28999999 599999986521 23444322 11 145899999999
Q ss_pred hHHHhHHhh
Q 016293 383 DFLSLKAAA 391 (392)
Q Consensus 383 el~~~~~~~ 391 (392)
|+.+++..+
T Consensus 336 eV~~~L~~L 344 (354)
T PLN02151 336 EVMEFLERL 344 (354)
T ss_pred HHHHHHHHH
Confidence 999988765
No 134
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.46 E-value=3.6e-07 Score=85.83 Aligned_cols=74 Identities=20% Similarity=0.251 Sum_probs=58.5
Q ss_pred hcCcEEEEEccCceecCCee----CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeec
Q 016293 81 DSVETFIFDCDGVIWKGDKL----IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCL 156 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~~~----~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~ 156 (392)
...++|+|||||||++.+.. .|++.++|++|+++|++++|+|| .+...+...++.+|+... |..++|.
T Consensus 126 ~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTN---g~Re~v~~~Le~lgL~~y-----FDvII~~ 197 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSY---GNREHVVHSLKETKLEGY-----FDIIICG 197 (303)
T ss_pred eeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHHcCCCcc-----ccEEEEC
Confidence 45789999999999986654 47899999999999999999995 355667888999999876 6555554
Q ss_pred ccccCCC
Q 016293 157 KFHRIPS 163 (392)
Q Consensus 157 ~~~~~~~ 163 (392)
|....+
T Consensus 198 -g~i~~k 203 (303)
T PHA03398 198 -GRKAGE 203 (303)
T ss_pred -CCcccc
Confidence 444443
No 135
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.44 E-value=8.2e-07 Score=78.02 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=34.5
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 348 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~a 348 (392)
.+..|+..++.+++.+|+++++|++|||+ .+|+.|++.|
T Consensus 139 ~~~~K~~~l~~~~~~~~~~~~~~~~iGDs-~~D~~~~~~a 177 (177)
T TIGR01488 139 EGECKGKVLKELLEESKITLKKIIAVGDS-VNDLPMLKLA 177 (177)
T ss_pred CcchHHHHHHHHHHHhCCCHHHEEEEeCC-HHHHHHHhcC
Confidence 45667888999999999999999999999 6999999864
No 136
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.42 E-value=1.2e-06 Score=75.24 Aligned_cols=110 Identities=13% Similarity=-0.036 Sum_probs=84.1
Q ss_pred CcEEEEEccCceecCC---------------------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHh
Q 016293 83 VETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKK 135 (392)
Q Consensus 83 ik~vifDlDGTL~d~~---------------------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~ 135 (392)
-+.+++|+||||+.+. .+.|++.+.|+.|+ ++++++|+|| .+...+...
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts---~~~~~~~~i 77 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTA---GLRMYADPV 77 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeC---CcHHHHHHH
Confidence 3589999999998842 34789999999998 5799999995 455566667
Q ss_pred hHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce
Q 016293 136 FETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 136 l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
++.+++... .|..+++.+.....||. +. ..++.++..++.+++++++...+....+.|+.+
T Consensus 78 l~~l~~~~~----~f~~i~~~~d~~~~KP~--------~~-------k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 78 LDLLDPKKY----FGYRRLFRDECVFVKGK--------YV-------KDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred HHHhCcCCC----EeeeEEECccccccCCe--------Ee-------ecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 788887533 14778888777777762 22 456667888899999999988888777777765
No 137
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.37 E-value=2.1e-06 Score=80.15 Aligned_cols=99 Identities=19% Similarity=0.246 Sum_probs=85.7
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.+.|+.|+++|++++|+|| .+...+...++.+|+..+ |..+++.+.....||+| +.+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~-----Fd~iv~~~~~~~~KP~p-----~~~~--- 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTN---APRENAELMISLLGLSDF-----FQAVIIGSECEHAKPHP-----DPYL--- 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCChhh-----CcEEEecCcCCCCCCCh-----HHHH---
Confidence 3578999999999999999999995 467778888899999887 99999999998889987 4444
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++.++++++++++..+++..+++|++.+.
T Consensus 172 ----~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~ 206 (248)
T PLN02770 172 ----KALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVG 206 (248)
T ss_pred ----HHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEE
Confidence 67788888889999999999999999999998753
No 138
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.34 E-value=7.7e-07 Score=73.90 Aligned_cols=60 Identities=15% Similarity=0.171 Sum_probs=43.8
Q ss_pred CcEEEEEccCceecCC-e------eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHH------------HHHHhhHhCCce
Q 016293 83 VETFIFDCDGVIWKGD-K------LIDGVPETLDMLRSKGKRLVFVTNNSTKSRK------------QYGKKFETLGLT 142 (392)
Q Consensus 83 ik~vifDlDGTL~d~~-~------~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~------------~~~~~l~~lgl~ 142 (392)
+|+|+||+||||++.. . +.+++.++|++++++|+.++++|.++.+... .+..+|+.-+++
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip 79 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP 79 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC
Confidence 3799999999998743 1 3457889999999999999999943333323 445666666664
No 139
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.31 E-value=8.4e-06 Score=72.62 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=60.0
Q ss_pred hcCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
.++.+|+.|+||||+...--...+...+.+|++.|++++++| +++..++..+.+.+|+... ..|..||+.
T Consensus 5 ~~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~~S---SKT~aE~~~l~~~l~v~~~-------p~iaEnG~a 74 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVILCS---SKTRAEMLYLQKSLGVQGL-------PLIAENGAA 74 (274)
T ss_pred ccceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEEec---cchHHHHHHHHHhcCCCCC-------ceeecCCce
Confidence 468899999999999944445578999999999999999999 7889998888889998732 356667766
Q ss_pred CCCC
Q 016293 161 IPSP 164 (392)
Q Consensus 161 ~~~~ 164 (392)
+.-|
T Consensus 75 I~~p 78 (274)
T COG3769 75 IYLP 78 (274)
T ss_pred EEec
Confidence 5543
No 140
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.23 E-value=5.8e-06 Score=77.81 Aligned_cols=98 Identities=11% Similarity=0.187 Sum_probs=83.9
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
++|++.+.|+.|+++|++++|+||+ +...+...++.+|+..+ |..+++.......||+| +.+.
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~-----Fd~ii~~~d~~~~KP~P-----e~~~---- 172 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTR---PRRYLERAIEAVGMEGF-----FSVVLAAEDVYRGKPDP-----EMFM---- 172 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCc---CHHHHHHHHHHcCCHhh-----CcEEEecccCCCCCCCH-----HHHH----
Confidence 5789999999999999999999963 45667777888999877 99999998888889876 4444
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++.++.+++++++..++...+++|+..+.
T Consensus 173 ---~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~ 207 (260)
T PLN03243 173 ---YAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVA 207 (260)
T ss_pred ---HHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEE
Confidence 77888899999999999999999999999998753
No 141
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.22 E-value=7.1e-06 Score=75.20 Aligned_cols=97 Identities=26% Similarity=0.326 Sum_probs=84.1
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
++|++.++|..|+++|++++|+| +++...+...++.+|+..+ |..+++..+....||+| +.+.
T Consensus 90 ~~~gv~e~L~~L~~~g~~l~i~T---~k~~~~~~~~l~~~gl~~~-----F~~i~g~~~~~~~KP~P-----~~l~---- 152 (220)
T COG0546 90 LFPGVKELLAALKSAGYKLGIVT---NKPERELDILLKALGLADY-----FDVIVGGDDVPPPKPDP-----EPLL---- 152 (220)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEe---CCcHHHHHHHHHHhCCccc-----cceEEcCCCCCCCCcCH-----HHHH----
Confidence 48899999999999999999999 5677888888999999988 99999988888899887 4544
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
..+++.+..+++.++|+++..++...+++|++.+
T Consensus 153 ---~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 153 ---LLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred ---HHHHHhCCChhheEEECCCHHHHHHHHHcCCCEE
Confidence 6777778876688999999999999999997754
No 142
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.20 E-value=9.2e-06 Score=73.89 Aligned_cols=99 Identities=22% Similarity=0.244 Sum_probs=83.7
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.++|+.|+++|++++|+|| .....+...++.+|+..+ |..+++.......||+| +.+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~-----f~~i~~~~~~~~~Kp~p-----~~~~--- 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTT---KMRDTVEMGLKLTGLDEF-----FDVVITLDDVEHAKPDP-----EPVL--- 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhc-----eeEEEecCcCCCCCCCc-----HHHH---
Confidence 3678999999999999999999996 456777888899999887 88999988888888876 3333
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++.++++++++++..+++..+++|++.+.
T Consensus 146 ----~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~ 180 (214)
T PRK13288 146 ----KALELLGAKPEEALMVGDNHHDILAGKNAGTKTAG 180 (214)
T ss_pred ----HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEE
Confidence 67777888888999999999999999999998753
No 143
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.17 E-value=9.1e-06 Score=79.92 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=86.1
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
++|++.+.|+.|+++|++++|+|| ++...+...++.+|+..+ |..+++.......||.| +.+.
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~y-----Fd~Iv~sddv~~~KP~P-----eifl---- 279 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVST---RPRKTLENAIGSIGIRGF-----FSVIVAAEDVYRGKPDP-----EMFI---- 279 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHH-----ceEEEecCcCCCCCCCH-----HHHH----
Confidence 578999999999999999999995 567888888999999888 99999999888888875 4444
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecC
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGG 218 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~ 218 (392)
..++++++.++.+++++++..+++..+++|+..+..
T Consensus 280 ---~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV 315 (381)
T PLN02575 280 ---YAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAV 315 (381)
T ss_pred ---HHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 778888999999999999999999999999987653
No 144
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.17 E-value=1.2e-05 Score=72.71 Aligned_cols=100 Identities=26% Similarity=0.301 Sum_probs=82.8
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhc
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFA 176 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~ 176 (392)
.-.++|++.+.|+.|+++|++++|+|| .+...+...++.+|+... |..+++.......||++ +.+.
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~~~KP~~-----~~~~- 138 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATG---KSGPRARSLLEALGLLPL-----FDHVIGSDEVPRPKPAP-----DIVR- 138 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHcCChhh-----eeeEEecCcCCCCCCCh-----HHHH-
Confidence 456789999999999999999999996 345566777889999776 88888887777778765 3333
Q ss_pred hHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 177 SSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 177 ~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
..++++++.++.+++++++..++...+..|++.+
T Consensus 139 ------~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 139 ------EALRLLDVPPEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred ------HHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEE
Confidence 7778888888899999999999999999999875
No 145
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.15 E-value=1.3e-05 Score=72.68 Aligned_cols=100 Identities=25% Similarity=0.287 Sum_probs=84.4
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
..++|++.++|+.|+++|++++|+|| .+...+...++.+|+... |..+++.+.....||.| +.+.
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~~Kp~p-----~~~~-- 148 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTN---KPTPLARPLLELLGLAKY-----FSVLIGGDSLAQRKPHP-----DPLL-- 148 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCcHhh-----CcEEEecCCCCCCCCCh-----HHHH--
Confidence 46799999999999999999999996 355677788899999877 88888888777788876 3333
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++.++.+++++++..++...+.+|++.+.
T Consensus 149 -----~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~ 183 (213)
T TIGR01449 149 -----LAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVL 183 (213)
T ss_pred -----HHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEE
Confidence 78888899888999999999999999999998754
No 146
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.15 E-value=1.5e-05 Score=71.60 Aligned_cols=99 Identities=21% Similarity=0.273 Sum_probs=82.7
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
-.++|++.++|+.|+++|++++++||. +...+...++.+|+... |..++++......||.| +..
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~gl~~~-----fd~i~~s~~~~~~KP~~-----~~~--- 154 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNG---SPAMLKSLVKHAGLDDP-----FDAVLSADAVRAYKPAP-----QVY--- 154 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHCCChhh-----hheeEehhhcCCCCCCH-----HHH---
Confidence 357899999999999999999999974 45667777888999777 89999998888888875 222
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
...++++++.++.+++++++..++...++.|++.+
T Consensus 155 ----~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 155 ----QLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred ----HHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 36778889989999999999989999999999865
No 147
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.14 E-value=1e-05 Score=74.46 Aligned_cols=96 Identities=19% Similarity=0.315 Sum_probs=80.7
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
++|++.+.|+.|+++|++++++||+ +...+...++.+|+... |..++++......||.| +.+.
T Consensus 94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~-----fd~iv~s~~~~~~KP~p-----~~~~---- 156 (224)
T PRK14988 94 LREDTVPFLEALKASGKRRILLTNA---HPHNLAVKLEHTGLDAH-----LDLLLSTHTFGYPKEDQ-----RLWQ---- 156 (224)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCc---CHHHHHHHHHHCCcHHH-----CCEEEEeeeCCCCCCCH-----HHHH----
Confidence 4689999999999999999999973 45566667888999877 89999988888888875 3333
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
..++++++.++++++++++...++..+++|++.
T Consensus 157 ---~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 157 ---AVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred ---HHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 677888999999999999999999999999974
No 148
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.13 E-value=1.3e-05 Score=73.07 Aligned_cols=100 Identities=23% Similarity=0.255 Sum_probs=82.8
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
-.++|++.++|+.|+++|++++++||+ ........++.+|+... |..+++.+.....||+| +..
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~~~KP~~-----~~~--- 156 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDG---LPVKQWEKLERLGVRDF-----FDAVITSEEEGVEKPHP-----KIF--- 156 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHhCChHHh-----ccEEEEeccCCCCCCCH-----HHH---
Confidence 367899999999999999999999974 34456667889999877 88999998888888875 333
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCc-chHHHHHHcCCceec
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGED-GILKELELAGFQYLG 217 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~-~~~~~l~~~g~~~~~ 217 (392)
...++++++.++++++++++. .++...+++|+..+.
T Consensus 157 ----~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~ 193 (221)
T TIGR02253 157 ----YAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVW 193 (221)
T ss_pred ----HHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEE
Confidence 377888899888899999987 699999999998754
No 149
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.10 E-value=1.3e-05 Score=74.87 Aligned_cols=101 Identities=18% Similarity=0.025 Sum_probs=82.9
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecccccc-ceeeecccccCCCCCCCCcchhhhh
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSF-LSIVCLKFHRIPSPNSSEFSQEEIF 175 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f-~~~i~~~~~~~~~~~~~~~~~e~i~ 175 (392)
...++|++.+.|+.|+++|++++|+|| .+...+...++.+|+... | ..+++.......||.| +.+.
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~---~~~~~~~~~l~~~gl~~~-----f~d~ii~~~~~~~~KP~p-----~~~~ 163 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTG---YTREMMDVVAPEAALQGY-----RPDYNVTTDDVPAGRPAP-----WMAL 163 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHHHHhcCC-----CCceEEccccCCCCCCCH-----HHHH
Confidence 346789999999999999999999995 566677777888888755 4 7788888877888876 4444
Q ss_pred chHHHHHHHHHhcCCC-CCCEEEEEeCcchHHHHHHcCCceec
Q 016293 176 ASSFAAAAYLKSIDFP-KDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 176 ~~~~~~~~~l~~~~~~-~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++. ++.+++++++..++...+++|+..+.
T Consensus 164 -------~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~ 199 (253)
T TIGR01422 164 -------KNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVG 199 (253)
T ss_pred -------HHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEE
Confidence 777888885 78899999999999999999998754
No 150
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.09 E-value=3.1e-05 Score=80.78 Aligned_cols=57 Identities=23% Similarity=0.341 Sum_probs=44.9
Q ss_pred cCcEEEEEccCceec----CCeeCCCHHHHHHHHHHCC-CcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKG-KRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 82 ~ik~vifDlDGTL~d----~~~~~~~~~eal~~l~~~G-i~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
....+.+..||+++. ...+.|++.++|+.|+++| +++.++| |.+.......++++|+
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivT---gd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLT---GDNRSAAEAVAAELGI 424 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEe---CCCHHHHHHHHHHhCC
Confidence 467788999998754 6778999999999999999 9999999 5555555555555555
No 151
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.09 E-value=2.2e-05 Score=72.35 Aligned_cols=99 Identities=19% Similarity=0.189 Sum_probs=81.4
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.+.|+.|+++|++++++||+ +.......++.+|+... |..+++.......||+| +.+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~---~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~~~KP~p-----~~~~--- 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNK---PEYLARLILPQLGWEQR-----CAVLIGGDTLAERKPHP-----LPLL--- 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCC---CHHHHHHHHHHcCchhc-----ccEEEecCcCCCCCCCH-----HHHH---
Confidence 35789999999999999999999974 34555667788998776 88888877777788876 4444
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++.++.+++++++..++...+++|+..+.
T Consensus 159 ----~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~ 193 (229)
T PRK13226 159 ----VAAERIGVAPTDCVYVGDDERDILAARAAGMPSVA 193 (229)
T ss_pred ----HHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEE
Confidence 77788899999999999999999999999998753
No 152
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.08 E-value=1.7e-05 Score=72.63 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=83.4
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.+.|+.|+++|++++|+|| .....+...++.+|+... |..+++.......||+| +.+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~~Kp~~-----~~~---- 154 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASA---SPLHMLEAVLTMFDLRDY-----FDALASAEKLPYSKPHP-----EVY---- 154 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHhCcchhc-----ccEEEEcccCCCCCCCH-----HHH----
Confidence 5788999999999999999999996 345666677888999877 88899988877888876 333
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
...++++++.++++++++++..++...+.+|++.+.
T Consensus 155 ---~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~ 190 (222)
T PRK10826 155 ---LNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIV 190 (222)
T ss_pred ---HHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEE
Confidence 378888899889999999999999999999998754
No 153
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=98.08 E-value=1.7e-05 Score=71.45 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=78.8
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.++|+.|+++|++++|+||.. ..+...++.+|+... |..++++......||+| +.+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~----~~~~~~l~~~~l~~~-----fd~i~~s~~~~~~KP~~-----~~~---- 166 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFD----SRLRGLLEALGLLEY-----FDFVVTSYEVGAEKPDP-----KIF---- 166 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCc----hhHHHHHHHCCcHHh-----cceEEeecccCCCCCCH-----HHH----
Confidence 678999999999999999999999843 234567888999777 88999988888888875 322
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCc-chHHHHHHcCCce
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGED-GILKELELAGFQY 215 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~-~~~~~l~~~g~~~ 215 (392)
...++++++.++++++|+++. .++...+++|++.
T Consensus 167 ---~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~ 201 (203)
T TIGR02252 167 ---QEALERAGISPEEALHIGDSLRNDYQGARAAGWRA 201 (203)
T ss_pred ---HHHHHHcCCChhHEEEECCCchHHHHHHHHcCCee
Confidence 367788898888999999986 6899999999865
No 154
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.07 E-value=2.5e-05 Score=63.95 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=48.0
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHHh
Q 016293 320 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 390 (392)
Q Consensus 320 ~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~~ 390 (392)
+++.|+-+-+-|+||||. .||+.|.++|.+.-+-+..+. .++.+. ..+|+++.++.|+++++.-
T Consensus 85 ii~eLkk~~~k~vmVGnG-aND~laLr~ADlGI~tiq~e~-v~~r~l-----~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 85 IIRELKKRYEKVVMVGNG-ANDILALREADLGICTIQQEG-VPERLL-----LTADVVLKEIAEILDLLKD 148 (152)
T ss_pred HHHHhcCCCcEEEEecCC-cchHHHhhhcccceEEeccCC-cchHHH-----hhchhhhhhHHHHHHHhhc
Confidence 556666556789999999 699999999987766665533 333332 2589999999999998653
No 155
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.07 E-value=1.8e-05 Score=69.99 Aligned_cols=97 Identities=19% Similarity=0.204 Sum_probs=80.6
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
..++|++.+.|+.|+++|++++++||+ ..+...++.+|+... |..+++.+.....||.| +.+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~-----f~~v~~~~~~~~~kp~~-----~~~--- 148 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDY-----FDAIVDADEVKEGKPHP-----ETF--- 148 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHH-----CCEeeehhhCCCCCCCh-----HHH---
Confidence 468999999999999999999999963 446677888999877 88888888777778765 322
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
...++++++.++.+++++++..+++..+..|++.+
T Consensus 149 ----~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 149 ----LLAAELLGVSPNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred ----HHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 26777888888899999999999999999998764
No 156
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=98.06 E-value=2.9e-05 Score=67.25 Aligned_cols=98 Identities=26% Similarity=0.382 Sum_probs=82.9
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.+.|++.++|+.|+++|++++++||+ +...+...++.+|+... |..++++......||.+ +..
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~---~~~~~~~~l~~~~~~~~-----f~~i~~~~~~~~~Kp~~-----~~~---- 139 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNG---SRERIERVLERLGLDDY-----FDEIISSDDVGSRKPDP-----DAY---- 139 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESS---EHHHHHHHHHHTTHGGG-----CSEEEEGGGSSSSTTSH-----HHH----
T ss_pred chhhhhhhhhhhcccccceeEEeecC---Ccccccccccccccccc-----cccccccchhhhhhhHH-----HHH----
Confidence 68999999999999999999999964 56778888999999866 88899988888888764 222
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
...++++++.++.+++++++...++..+.+|+..+
T Consensus 140 ---~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i 174 (176)
T PF13419_consen 140 ---RRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTI 174 (176)
T ss_dssp ---HHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEE
T ss_pred ---HHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEE
Confidence 36777789999999999999999999999998763
No 157
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.04 E-value=2.2e-05 Score=71.60 Aligned_cols=97 Identities=20% Similarity=0.185 Sum_probs=80.9
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce--eeccccccceeeecccccCCCCCCCCcchhhhhc
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT--VTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFA 176 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~--~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~ 176 (392)
.++|++.+.|+.|+++|++++|+|| .....+...++.+|+. .. |..+++..+....||.| +.+.
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~---~~~~~~~~~l~~~~l~~~~~-----f~~i~~~~~~~~~KP~p-----~~~~- 152 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTG---FDRDTAERLLEKLGWTVGDD-----VDAVVCPSDVAAGRPAP-----DLIL- 152 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHHhhhhhhcc-----CCEEEcCCcCCCCCCCH-----HHHH-
Confidence 5889999999999999999999995 4566777788889987 66 88999988877788865 3333
Q ss_pred hHHHHHHHHHhcCCC-CCCEEEEEeCcchHHHHHHcCCce
Q 016293 177 SSFAAAAYLKSIDFP-KDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 177 ~~~~~~~~l~~~~~~-~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
..++++++. ++.+++++++..+++..+++|+..
T Consensus 153 ------~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 153 ------RAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred ------HHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 677778886 578999999999999999999987
No 158
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.04 E-value=2.2e-05 Score=73.77 Aligned_cols=64 Identities=23% Similarity=0.417 Sum_probs=53.9
Q ss_pred hcCcEEEEEccCceecCC---------------------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHH
Q 016293 81 DSVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~---------------------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~ 133 (392)
.+-.+|+||+|+|+++.. .++|++.++|+.|+++|++++++||+.......+.
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~ 152 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATL 152 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHH
Confidence 345699999999998632 25789999999999999999999988777777788
Q ss_pred HhhHhCCceee
Q 016293 134 KKFETLGLTVT 144 (392)
Q Consensus 134 ~~l~~lgl~~~ 144 (392)
..|+.+|++..
T Consensus 153 ~~Lkk~Gi~~~ 163 (266)
T TIGR01533 153 KNLKRFGFPQA 163 (266)
T ss_pred HHHHHcCcCCC
Confidence 89999999753
No 159
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.02 E-value=6e-05 Score=78.71 Aligned_cols=42 Identities=19% Similarity=0.332 Sum_probs=36.6
Q ss_pred cCcEEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeC
Q 016293 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTN 123 (392)
Q Consensus 82 ~ik~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn 123 (392)
....+.++.||++.- ...+.|++.++|++|+++|++++++||
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSg 429 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTG 429 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcC
Confidence 456788999999854 667889999999999999999999994
No 160
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.00 E-value=2.3e-05 Score=71.92 Aligned_cols=102 Identities=23% Similarity=0.275 Sum_probs=89.3
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhc
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFA 176 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~ 176 (392)
+..++|++.++|+.|+++|++++++|| .+...+...++.+|+..+ |..+++..+....||+| +..+
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~---s~~~~~~~~L~~~gl~~~-----f~~~v~~~dv~~~KP~P-----d~yL- 149 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDY-----FDVIVTADDVARGKPAP-----DIYL- 149 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecC---ChHHHHHHHHHHccChhh-----cchhccHHHHhcCCCCC-----HHHH-
Confidence 457899999999999999999999994 456677778889999888 99999999999999998 5445
Q ss_pred hHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecC
Q 016293 177 SSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGG 218 (392)
Q Consensus 177 ~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~ 218 (392)
...+++++.+.+|+.++++..-++..+++|+..+..
T Consensus 150 ------~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v 185 (221)
T COG0637 150 ------LAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGV 185 (221)
T ss_pred ------HHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEe
Confidence 777888899999999999999999999999988654
No 161
>PRK11587 putative phosphatase; Provisional
Probab=97.98 E-value=5.1e-05 Score=69.30 Aligned_cols=98 Identities=15% Similarity=0.127 Sum_probs=77.3
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.+.|+.|+++|++++++||++. ......++.+|+. . |..+++.......||+| +.+.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~---~~~~~~l~~~~l~-~-----~~~i~~~~~~~~~KP~p-----~~~~--- 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSV---PVASARHKAAGLP-A-----PEVFVTAERVKRGKPEP-----DAYL--- 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCc---hHHHHHHHhcCCC-C-----ccEEEEHHHhcCCCCCc-----HHHH---
Confidence 4689999999999999999999998543 3345556777773 3 55677777766778876 3333
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++.++.+++++++..++...+++|+..+.
T Consensus 146 ----~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~ 180 (218)
T PRK11587 146 ----LGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA 180 (218)
T ss_pred ----HHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEE
Confidence 67778899999999999999999999999997653
No 162
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.98 E-value=5e-05 Score=66.80 Aligned_cols=98 Identities=21% Similarity=0.310 Sum_probs=77.3
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
..+.|++.++|+.|+++|++++++||+.. .. ...+..+|+... |..+++.......||.| +..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~---~~-~~~~~~~~l~~~-----f~~i~~~~~~~~~KP~~-----~~~--- 146 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPR---DH-AVLVQELGLRDL-----FDVVIFSGDVGRGKPDP-----DIY--- 146 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCch---HH-HHHHHhcCCHHH-----CCEEEEcCCCCCCCCCH-----HHH---
Confidence 36789999999999999999999998532 22 333445888777 88999988777788765 222
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
...++++++.++.+++++++...+...++.|+..+
T Consensus 147 ----~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i 181 (183)
T TIGR01509 147 ----LLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTV 181 (183)
T ss_pred ----HHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEE
Confidence 36677888888999999999888999999998763
No 163
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=97.95 E-value=9.9e-05 Score=68.32 Aligned_cols=49 Identities=16% Similarity=-0.012 Sum_probs=32.4
Q ss_pred CCCcHHHHHHHHHHcCCC---CCcEEEEcCCchhhHHHHHHcCCe-----EEEEecCC
Q 016293 310 GKPSTFMMDYLANKFGIQ---KSQICMVGDRLDTDILFGQNGGCK-----TLLVLSGV 359 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~---~~evi~IGD~l~nDI~ma~~aG~~-----~i~V~~G~ 359 (392)
+..|+.+++.+++.++.. ++-++++||. .+|-.|.+.+.-. ++.|.++.
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD-~tDE~~f~~~~~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDD-RTDEDAFRALRELEEGGFGIKVGSVS 219 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESS-HHHHHHHHTTTTS----EEEEES---
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCC-CCCHHHHHHHHhcccCCCCeEEEeec
Confidence 556889999999999876 7889999999 6999999987654 56666543
No 164
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=97.95 E-value=0.00091 Score=62.72 Aligned_cols=73 Identities=16% Similarity=0.228 Sum_probs=54.3
Q ss_pred hcCcEEEEEccCceecC------CeeCCCHHHHHHHHHHCC-CcEEEEeCCCCCCHHHHHHhhHhCCceeecccccccee
Q 016293 81 DSVETFIFDCDGVIWKG------DKLIDGVPETLDMLRSKG-KRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSI 153 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~------~~~~~~~~eal~~l~~~G-i~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~ 153 (392)
.+-+++++|+||||..- ..+.++..+.|++|..+. .-++|+| ||+..++..++...|+ ++
T Consensus 16 a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiS---GR~~~~l~~~~~v~~i----------~l 82 (266)
T COG1877 16 ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIIS---GRSLAELERLFGVPGI----------GL 82 (266)
T ss_pred ccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEe---CCCHHHHHHhcCCCCc----------cE
Confidence 35779999999999872 234557899999999984 4688889 9999999888775444 35
Q ss_pred eecccccCCCCCC
Q 016293 154 VCLKFHRIPSPNS 166 (392)
Q Consensus 154 i~~~~~~~~~~~~ 166 (392)
++.+|+...++..
T Consensus 83 ~aehGa~~r~~~g 95 (266)
T COG1877 83 IAEHGAEVRDPNG 95 (266)
T ss_pred EEecceEEecCCC
Confidence 5666766655433
No 165
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.95 E-value=5.3e-05 Score=71.50 Aligned_cols=101 Identities=17% Similarity=0.029 Sum_probs=79.7
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
..++|++.+.|+.|+++|++++|+|| .+...+...++.+++... .|..+++.......||+| +.+.
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~---~~~~~~~~~l~~~~l~~~----~~d~i~~~~~~~~~KP~p-----~~~~-- 165 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTG---YTREMMDVVVPLAAAQGY----RPDHVVTTDDVPAGRPYP-----WMAL-- 165 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHHhhcCC----CceEEEcCCcCCCCCCCh-----HHHH--
Confidence 35789999999999999999999995 455566666777776543 136788888877888876 4433
Q ss_pred HHHHHHHHHhcCCC-CCCEEEEEeCcchHHHHHHcCCceec
Q 016293 178 SFAAAAYLKSIDFP-KDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 178 ~~~~~~~l~~~~~~-~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++. ++.+++|+++..+++..+++|++.+.
T Consensus 166 -----~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~ 201 (267)
T PRK13478 166 -----KNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVG 201 (267)
T ss_pred -----HHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEE
Confidence 778888885 57899999999999999999998754
No 166
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.94 E-value=0.0001 Score=76.55 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=45.1
Q ss_pred HHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEE--CChhhHHHhHH
Q 016293 321 ANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA 389 (392)
Q Consensus 321 ~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~--~sl~el~~~~~ 389 (392)
+++++...++|+||||+ .||+.++++|| +.|.+|+...+... ..+|+++ +++.+|.+.+.
T Consensus 418 i~~l~~~~~~v~~vGDg-~nD~~al~~A~---vgia~g~~~~~~~~-----~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 418 VKELREKYGPVAMVGDG-INDAPALAAAD---VGIAMGASGSDVAI-----ETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred HHHHHhcCCEEEEEeCC-HHHHHHHHhCC---EEEEeCCCccHHHH-----HhCCEEEECCCHHHHHHHHH
Confidence 44444455899999999 59999999999 68888853322322 3589999 89999988665
No 167
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.93 E-value=6.6e-05 Score=65.64 Aligned_cols=110 Identities=16% Similarity=0.257 Sum_probs=61.9
Q ss_pred CcEEEEEccCceec----CC----------------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhh
Q 016293 83 VETFIFDCDGVIWK----GD----------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF 136 (392)
Q Consensus 83 ik~vifDlDGTL~d----~~----------------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l 136 (392)
.|+|+||+|+|||. +. .++|++.+.|+.|+++|+++++||- .-.+.-..+.|
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASR--t~~P~~A~~~L 80 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASR--TDEPDWARELL 80 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE----S-HHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEEC--CCChHHHHHHH
Confidence 47999999999997 11 3589999999999999999999992 11345566777
Q ss_pred HhCCce----------eeccccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHH
Q 016293 137 ETLGLT----------VTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILK 206 (392)
Q Consensus 137 ~~lgl~----------~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~ 206 (392)
+.+++. .. |.+.-.+.+ +.........++.++..+..+++.+...=.+
T Consensus 81 ~~l~i~~~~~~~~~~~~~-----F~~~eI~~g-----------------sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 81 KLLEIDDADGDGVPLIEY-----FDYLEIYPG-----------------SKTTHFRRIHRKTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp HHTT-C----------CC-----ECEEEESSS------------------HHHHHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred HhcCCCccccccccchhh-----cchhheecC-----------------chHHHHHHHHHhcCCChhHEEEecCchhcce
Confidence 889987 22 333222211 1112233455566776666566655554455
Q ss_pred HHHHcCCcee
Q 016293 207 ELELAGFQYL 216 (392)
Q Consensus 207 ~l~~~g~~~~ 216 (392)
.....|+.++
T Consensus 139 ~v~~lGV~~v 148 (169)
T PF12689_consen 139 VVSKLGVTCV 148 (169)
T ss_dssp HHHTTT-EEE
T ss_pred eeEecCcEEE
Confidence 5566888774
No 168
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.93 E-value=3.4e-05 Score=68.16 Aligned_cols=97 Identities=16% Similarity=0.247 Sum_probs=79.7
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
..++|++.++|+.|+++|++++++||.. . ....++.+|+... |..+++.......||.| +.+.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~---~~~~l~~~~l~~~-----f~~~~~~~~~~~~kp~p-----~~~~-- 148 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--N---APTVLEKLGLIDY-----FDAIVDPAEIKKGKPDP-----EIFL-- 148 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--c---HHHHHHhcCcHhh-----CcEEEehhhcCCCCCCh-----HHHH--
Confidence 3678999999999999999999999732 2 2346788999877 88999888777788876 3333
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
..++++++.++++++++++..++...++.|++.+
T Consensus 149 -----~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i 182 (185)
T TIGR01990 149 -----AAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV 182 (185)
T ss_pred -----HHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEE
Confidence 7788888888899999999999999999999875
No 169
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.92 E-value=0.00014 Score=70.62 Aligned_cols=42 Identities=14% Similarity=0.312 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHH-HcCCeEEEEecC
Q 016293 317 MDYLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVLSG 358 (392)
Q Consensus 317 ~~~~~~~lgv~~~evi~IGD~l~nDI~ma~-~aG~~~i~V~~G 358 (392)
...+.+.+|++.++|++|||++.+||..++ .+|++|++|..-
T Consensus 283 ~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 283 LKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred HHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 667889999999999999999999999998 999999999863
No 170
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.89 E-value=9.4e-05 Score=64.83 Aligned_cols=31 Identities=26% Similarity=0.271 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHH
Q 016293 314 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQN 347 (392)
Q Consensus 314 p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~ 347 (392)
+..+..+.+ |++-+.++||||. .||++|..-
T Consensus 161 a~~i~~lrk--~~~~~~~~mvGDG-atDlea~~p 191 (227)
T KOG1615|consen 161 AEVIALLRK--NYNYKTIVMVGDG-ATDLEAMPP 191 (227)
T ss_pred HHHHHHHHh--CCChheeEEecCC-ccccccCCc
Confidence 555666666 7777899999999 799998765
No 171
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=97.86 E-value=4.8e-05 Score=68.98 Aligned_cols=101 Identities=17% Similarity=0.213 Sum_probs=77.1
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
..++|++.++|+.|+++|++++++||+...... ....+..+++... |..++++......||+| +..
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~-~~~~~~~~~l~~~-----fd~v~~s~~~~~~KP~p-----~~~--- 158 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHS-AEEALLPGDIMAL-----FDAVVESCLEGLRKPDP-----RIY--- 158 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccch-hhhHhhhhhhHhh-----CCEEEEeeecCCCCCCH-----HHH---
Confidence 357899999999999999999999986543321 2223334566555 88888887777788876 322
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
...++++++.++.++++.+...++...+++|++.+
T Consensus 159 ----~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i 193 (211)
T TIGR02247 159 ----QLMLERLGVAPEECVFLDDLGSNLKPAAALGITTI 193 (211)
T ss_pred ----HHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 36778889888899999888889999999999864
No 172
>PLN02811 hydrolase
Probab=97.85 E-value=8.5e-05 Score=67.95 Aligned_cols=101 Identities=13% Similarity=0.155 Sum_probs=76.2
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHH-hhHhCCceeeccccccceeeecc--cccCCCCCCCCcchhh
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGK-KFETLGLTVTEVKDSFLSIVCLK--FHRIPSPNSSEFSQEE 173 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~-~l~~lgl~~~~~~~~f~~~i~~~--~~~~~~~~~~~~~~e~ 173 (392)
...++|++.+.|+.|+++|++++|+||. ....+.. .++..++... |..+++.. .....||.| +.
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~---~~~~~~~~~~~~~~l~~~-----f~~i~~~~~~~~~~~KP~p-----~~ 142 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGS---HKRHFDLKTQRHGELFSL-----MHHVVTGDDPEVKQGKPAP-----DI 142 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCC---chhhHHHHHcccHHHHhh-----CCEEEECChhhccCCCCCc-----HH
Confidence 3457899999999999999999999964 3323332 2333456555 78888888 666778876 33
Q ss_pred hhchHHHHHHHHHhcC---CCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 174 IFASSFAAAAYLKSID---FPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 174 i~~~~~~~~~~l~~~~---~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
+. ..+++++ +.++.+++|+++..+++..+.+|++.+.
T Consensus 143 ~~-------~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 143 FL-------AAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HH-------HHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 33 5666665 7788999999999999999999998754
No 173
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.85 E-value=9.3e-05 Score=70.11 Aligned_cols=98 Identities=17% Similarity=0.289 Sum_probs=80.1
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
++|++.+.|+.|+++|++++++||+ +...+...++.+|+... |+.+++.+.....||.| +.+.
T Consensus 102 ~~~g~~e~L~~Lk~~g~~l~ivTn~---~~~~~~~~l~~~~i~~~-----f~~i~~~d~~~~~Kp~p-----~~~~---- 164 (272)
T PRK13223 102 VYPGVRDTLKWLKKQGVEMALITNK---PERFVAPLLDQMKIGRY-----FRWIIGGDTLPQKKPDP-----AALL---- 164 (272)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECC---cHHHHHHHHHHcCcHhh-----CeEEEecCCCCCCCCCc-----HHHH----
Confidence 5789999999999999999999963 44566677888898776 88888887777777765 3333
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++.++.+++++++..+++..+.+|++.+.
T Consensus 165 ---~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~ 199 (272)
T PRK13223 165 ---FVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVA 199 (272)
T ss_pred ---HHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEE
Confidence 67777888889999999999999999999997643
No 174
>PLN02940 riboflavin kinase
Probab=97.84 E-value=7.4e-05 Score=74.25 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=82.8
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhH-hCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFE-TLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~-~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
++|++.+.|+.|+++|++++|+||+ +...+...++ .+|+... |..+++.+.....||+| +.+.
T Consensus 94 l~pGv~elL~~Lk~~g~~l~IvTn~---~~~~~~~~l~~~~gl~~~-----Fd~ii~~d~v~~~KP~p-----~~~~--- 157 (382)
T PLN02940 94 ALPGANRLIKHLKSHGVPMALASNS---PRANIEAKISCHQGWKES-----FSVIVGGDEVEKGKPSP-----DIFL--- 157 (382)
T ss_pred CCcCHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHhccChHhh-----CCEEEehhhcCCCCCCH-----HHHH---
Confidence 5789999999999999999999964 4555666676 6888777 99999999888888876 3333
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecC
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGG 218 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~ 218 (392)
..++++++.++++++++++..+++..+.+|++.+..
T Consensus 158 ----~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v 193 (382)
T PLN02940 158 ----EAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAV 193 (382)
T ss_pred ----HHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 778888999999999999999999999999987653
No 175
>PRK08238 hypothetical protein; Validated
Probab=97.84 E-value=8.1e-05 Score=75.87 Aligned_cols=93 Identities=17% Similarity=0.139 Sum_probs=65.3
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHHH
Q 016293 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFA 180 (392)
Q Consensus 101 ~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~ 180 (392)
.|++.+.+++++++|++++++|| .+...+...++.+|+ |+.+++.++....++.++ .+
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTa---s~~~~a~~i~~~lGl--------Fd~Vigsd~~~~~kg~~K---~~-------- 131 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATA---SDERLAQAVAAHLGL--------FDGVFASDGTTNLKGAAK---AA-------- 131 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCC--------CCEEEeCCCccccCCchH---HH--------
Confidence 47899999999999999999994 556666667788887 446788877766655431 01
Q ss_pred HHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecCC
Q 016293 181 AAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGP 219 (392)
Q Consensus 181 ~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~ 219 (392)
...+.++ .+...|++|+..++..++.++..+..++
T Consensus 132 --~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~~av~Vn~ 166 (479)
T PRK08238 132 --ALVEAFG--ERGFDYAGNSAADLPVWAAARRAIVVGA 166 (479)
T ss_pred --HHHHHhC--ccCeeEecCCHHHHHHHHhCCCeEEECC
Confidence 1112222 2345788888899999999887765443
No 176
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=97.78 E-value=1.6e-05 Score=68.26 Aligned_cols=89 Identities=12% Similarity=-0.128 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCC-CccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGG-GSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 331 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~ev 331 (392)
++.+.+.+..++. ....+|+|+......... ....+. ..++..+.+ .+....+||+ |..+++++|.+|++|
T Consensus 47 ~pG~~e~L~~L~~-~~~l~I~Ts~~~~~~~~i-l~~l~~~~~~f~~i~~---~~d~~~~KP~---~~k~l~~l~~~p~~~ 118 (148)
T smart00577 47 RPGVDEFLKRASE-LFELVVFTAGLRMYADPV-LDLLDPKKYFGYRRLF---RDECVFVKGK---YVKDLSLLGRDLSNV 118 (148)
T ss_pred CCCHHHHHHHHHh-ccEEEEEeCCcHHHHHHH-HHHhCcCCCEeeeEEE---CccccccCCe---EeecHHHcCCChhcE
Confidence 4566777777763 345788888886442221 112222 123344433 3333347886 899999999999999
Q ss_pred EEEcCCchhhHHHHHHcCC
Q 016293 332 CMVGDRLDTDILFGQNGGC 350 (392)
Q Consensus 332 i~IGD~l~nDI~ma~~aG~ 350 (392)
++|||+ .+|+++++++|+
T Consensus 119 i~i~Ds-~~~~~aa~~ngI 136 (148)
T smart00577 119 IIIDDS-PDSWPFHPENLI 136 (148)
T ss_pred EEEECC-HHHhhcCccCEE
Confidence 999999 599999999983
No 177
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.77 E-value=0.00019 Score=65.56 Aligned_cols=99 Identities=22% Similarity=0.293 Sum_probs=80.0
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.++++.++++|++++++|| .........++.+|+... |..+++.+.....||.| +.
T Consensus 93 ~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~~kp~~-----~~----- 154 (226)
T PRK13222 93 RLYPGVKETLAALKAAGYPLAVVTN---KPTPFVAPLLEALGIADY-----FSVVIGGDSLPNKKPDP-----AP----- 154 (226)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCccC-----ccEEEcCCCCCCCCcCh-----HH-----
Confidence 3678999999999999999999995 345666677888998766 78888877766777765 22
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
....++++++.++++++++++..++..++..|++.+.
T Consensus 155 --~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~ 191 (226)
T PRK13222 155 --LLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVG 191 (226)
T ss_pred --HHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEE
Confidence 2367778888888999999999999999999997653
No 178
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.76 E-value=0.00018 Score=64.62 Aligned_cols=90 Identities=19% Similarity=0.137 Sum_probs=72.1
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
+.+...+.|+.|+++|++++|+|| ++...+...++.+|+... |..+++..+... ||.| +.+.
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~-----f~~~~~~~~~~~-KP~p-----~~~~---- 168 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTG---RPRKDAAKFLTTHGLEIL-----FPVQIWMEDCPP-KPNP-----EPLI---- 168 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECC---CCHHHHHHHHHHcCchhh-----CCEEEeecCCCC-CcCH-----HHHH----
Confidence 455679999999999999999995 567778888999999877 888999887766 8876 3333
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHH
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELEL 210 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~ 210 (392)
..++++++.++.+++++++..++...+.
T Consensus 169 ---~~~~~~~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 169 ---LAAKALGVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred ---HHHHHhCcCcccEEEEeCCHHHHHHHHh
Confidence 5667778888899999988877766543
No 179
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=97.74 E-value=0.00034 Score=60.69 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccC---CCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCC
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAG---GGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS 329 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~ 329 (392)
|++....++..+..+-.++|.++..... .. .+.+ .+.+...|+.-.+. ..-.|-....|..++...|++|.
T Consensus 105 ypDav~~ik~wk~~g~~vyiYSSGSV~A-Qk---L~Fghs~agdL~~lfsGyfDt--tiG~KrE~~SY~kIa~~iGl~p~ 178 (229)
T COG4229 105 YPDAVQAIKRWKALGMRVYIYSSGSVKA-QK---LFFGHSDAGDLNSLFSGYFDT--TIGKKRESQSYAKIAGDIGLPPA 178 (229)
T ss_pred CHhHHHHHHHHHHcCCcEEEEcCCCchh-HH---HhhcccccccHHhhhcceeec--cccccccchhHHHHHHhcCCCch
Confidence 5666666666665444567766655321 11 1222 22222233322222 12357777889999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEec
Q 016293 330 QICMVGDRLDTDILFGQNGGCKTLLVLS 357 (392)
Q Consensus 330 evi~IGD~l~nDI~ma~~aG~~~i~V~~ 357 (392)
+++++.|++ +.+.+|+.+|+.|+++.+
T Consensus 179 eilFLSDn~-~EL~AA~~vGl~t~l~~R 205 (229)
T COG4229 179 EILFLSDNP-EELKAAAGVGLATGLAVR 205 (229)
T ss_pred heEEecCCH-HHHHHHHhcchheeeeec
Confidence 999999995 999999999999999876
No 180
>PRK09449 dUMP phosphatase; Provisional
Probab=97.73 E-value=0.0002 Score=65.44 Aligned_cols=98 Identities=18% Similarity=0.153 Sum_probs=78.2
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
-.++|++.+.|+.|+ +|++++++||+ +.......++.+|+... |+.++++......||.| +.+
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~---~~~~~~~~l~~~~l~~~-----fd~v~~~~~~~~~KP~p-----~~~--- 156 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNG---FTELQQVRLERTGLRDY-----FDLLVISEQVGVAKPDV-----AIF--- 156 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCC---cHHHHHHHHHhCChHHH-----cCEEEEECccCCCCCCH-----HHH---
Confidence 357899999999999 68999999984 34555667889999877 99999998888888876 332
Q ss_pred HHHHHHHHHhcCCCC-CCEEEEEeCc-chHHHHHHcCCcee
Q 016293 178 SFAAAAYLKSIDFPK-DKKVYVVGED-GILKELELAGFQYL 216 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~-~~~~~v~~~~-~~~~~l~~~g~~~~ 216 (392)
...++++++.+ +.+++++++. .++...+++|+..+
T Consensus 157 ----~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i 193 (224)
T PRK09449 157 ----DYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTC 193 (224)
T ss_pred ----HHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEE
Confidence 36778888644 6788888886 58999999999764
No 181
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.72 E-value=7.9e-05 Score=62.29 Aligned_cols=90 Identities=16% Similarity=0.077 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEecC-CccccccccccccCC-C---ccceeeecccCCCccccCCCcHHHHHHHHHHcC-
Q 016293 252 NYYKVQYGTLCIRENPGCLFIATNR-DAVTHLTDAQEWAGG-G---SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFG- 325 (392)
Q Consensus 252 ~~~~~~~~~~~l~~~~g~~~I~tn~-d~~~~~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lg- 325 (392)
.|+.+.+.+..+++.+-..+|+||. ...... ......+. + .+...+......+ .+|+|..|..+++++|
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~-~~l~~~~~~~~i~~l~~~f~~~~~~~----~~pkp~~~~~a~~~lg~ 104 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAY-ELLKIFEDFGIIFPLAEYFDPLTIGY----WLPKSPRLVEIALKLNG 104 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHH-HHHHhccccccchhhHhhhhhhhhcC----CCcHHHHHHHHHHHhcC
Confidence 3788899999998765567888988 442211 11111110 0 0112222222222 4799999999999999
Q ss_pred -CCCCcEEEEcCCchhhHHHHHH
Q 016293 326 -IQKSQICMVGDRLDTDILFGQN 347 (392)
Q Consensus 326 -v~~~evi~IGD~l~nDI~ma~~ 347 (392)
++|++|+||||+ ..|++..+.
T Consensus 105 ~~~p~~~l~igDs-~~n~~~~~~ 126 (128)
T TIGR01681 105 VLKPKSILFVDDR-PDNNEEVDY 126 (128)
T ss_pred CCCcceEEEECCC-HhHHHHHHh
Confidence 999999999999 588776553
No 182
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.72 E-value=0.0028 Score=68.82 Aligned_cols=56 Identities=20% Similarity=0.262 Sum_probs=45.1
Q ss_pred CcEEEEEccCceecCC---------eeCCCHHHHHHHHHHC-CCcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 83 VETFIFDCDGVIWKGD---------KLIDGVPETLDMLRSK-GKRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 83 ik~vifDlDGTL~d~~---------~~~~~~~eal~~l~~~-Gi~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
-++++||+||||.... .+.++..++|+.|.+. +-.++|+| ||+...+.+.+...++
T Consensus 507 ~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~~~~~~l 572 (797)
T PLN03063 507 NRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLS---RSGKDILDKNFGEYNI 572 (797)
T ss_pred CeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEe---CCCHHHHHHHhCCCCC
Confidence 4799999999998521 2455788999999886 67899999 9999999999875444
No 183
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=97.72 E-value=0.00014 Score=64.50 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=79.9
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++| ..+.|..|++. ++++|+|| .+...+...++.+|+..+ |..+++.......||.| +.+.
T Consensus 88 ~~~~-~~e~L~~L~~~-~~l~I~T~---~~~~~~~~~l~~~~l~~~-----fd~i~~~~~~~~~KP~p-----~~~~--- 149 (188)
T PRK10725 88 EPLP-LIEVVKAWHGR-RPMAVGTG---SESAIAEALLAHLGLRRY-----FDAVVAADDVQHHKPAP-----DTFL--- 149 (188)
T ss_pred CCcc-HHHHHHHHHhC-CCEEEEcC---CchHHHHHHHHhCCcHhH-----ceEEEehhhccCCCCCh-----HHHH---
Confidence 4566 56899999876 89999995 456677788899999877 89999998888888876 3333
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..++++++.++.+++++++..+++..+++|++.++
T Consensus 150 ----~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~ 184 (188)
T PRK10725 150 ----RCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVD 184 (188)
T ss_pred ----HHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEe
Confidence 77888888888999999999999999999998753
No 184
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.71 E-value=0.00021 Score=65.09 Aligned_cols=99 Identities=27% Similarity=0.318 Sum_probs=81.6
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
..++|++.+.|+.|+++ ++++++||+ ....+...++.+|+... |+.+++++.....||.| + ++
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~---~~~~~~~~l~~~~l~~~-----fd~i~~~~~~~~~KP~~-----~-~~-- 158 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNG---VRETQYKRLRKSGLFPF-----FDDIFVSEDAGIQKPDK-----E-IF-- 158 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCC---chHHHHHHHHHCCcHhh-----cCEEEEcCccCCCCCCH-----H-HH--
Confidence 46889999999999999 999999974 45666677889999887 99999998888888865 2 22
Q ss_pred HHHHHHHHHhc-CCCCCCEEEEEeCc-chHHHHHHcCCceec
Q 016293 178 SFAAAAYLKSI-DFPKDKKVYVVGED-GILKELELAGFQYLG 217 (392)
Q Consensus 178 ~~~~~~~l~~~-~~~~~~~~~v~~~~-~~~~~l~~~g~~~~~ 217 (392)
...++++ ++.++++++++++. .++...++.|++.+.
T Consensus 159 ----~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~ 196 (224)
T TIGR02254 159 ----NYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCW 196 (224)
T ss_pred ----HHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEE
Confidence 3677777 88888999999987 699999999998753
No 185
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.69 E-value=0.00028 Score=60.40 Aligned_cols=92 Identities=22% Similarity=0.247 Sum_probs=69.5
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
...++++.+.|+.|+++|++++++||+ ........++.+ +... |..+++..... .||.| +.+.
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~---~~~~~~~~~~~~-l~~~-----f~~i~~~~~~~-~Kp~~-----~~~~-- 125 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNG---SLRAQKLLLRKH-LGDY-----FDLILGSDEFG-AKPEP-----EIFL-- 125 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCC---chHHHHHHHHHH-HHhc-----CcEEEecCCCC-CCcCH-----HHHH--
Confidence 345689999999999999999999963 455555566665 5555 77888877665 77765 3333
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcC
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAG 212 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g 212 (392)
..++++++.+ ++++++++..++...+++|
T Consensus 126 -----~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 126 -----AALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -----HHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 7788888887 8999999988887777654
No 186
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.69 E-value=0.00058 Score=56.09 Aligned_cols=103 Identities=21% Similarity=0.282 Sum_probs=70.4
Q ss_pred cEEEEEccCceecCC-------------------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHh
Q 016293 84 ETFIFDCDGVIWKGD-------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET 138 (392)
Q Consensus 84 k~vifDlDGTL~d~~-------------------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~ 138 (392)
++|+||.||||||.+ .+++.+++.++.++..|+-+..+| =.-.....+.|+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~s---WN~~~kA~~aLra 77 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLAS---WNFEDKAIKALRA 77 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEee---cCchHHHHHHHHH
Confidence 479999999999943 367889999999999999999998 4456667788899
Q ss_pred CCceeeccccccceeeecccccCCCCCCCCcchhhhhchHHHH-HHHHHhcCCCCCCEEEEEeCcchH
Q 016293 139 LGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAA-AAYLKSIDFPKDKKVYVVGEDGIL 205 (392)
Q Consensus 139 lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~-~~~l~~~~~~~~~~~~v~~~~~~~ 205 (392)
+++..+ |.+++. +|+| ....+.+.-.. ...-+...+.++..+|+.+...-.
T Consensus 78 l~~~~y-----Fhy~Vi-------ePhP----~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 78 LDLLQY-----FHYIVI-------EPHP----YKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHF 129 (164)
T ss_pred hchhhh-----EEEEEe-------cCCC----hhHHHHHHHHHHHHHhhccccCcceEEEEecccccH
Confidence 999887 777765 4666 33333221111 111112245566777777765433
No 187
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.67 E-value=0.00015 Score=65.20 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=76.5
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHh-CCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~-lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
.++|++.++|+.|+++|++++|+||+.. ......+.. .++... |+.++++......||+| +..
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~---~~~~~~~~~~~~l~~~-----fd~v~~s~~~~~~KP~p-----~~~--- 147 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNR---LHTTFWPEEYPEVRAA-----ADHIYLSQDLGMRKPEA-----RIY--- 147 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCch---hhHHHHHhhchhHHHh-----cCEEEEecccCCCCCCH-----HHH---
Confidence 4688999999999999999999998532 222222322 355555 88899998888899876 332
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
...++++++.++.+++++++...+...++.|++.+
T Consensus 148 ----~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 148 ----QHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred ----HHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 37788889999999999999888999999999864
No 188
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.64 E-value=0.00059 Score=74.67 Aligned_cols=62 Identities=16% Similarity=0.105 Sum_probs=46.6
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 320 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 320 ~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
++++++..+++|+||||+ .||+.++++||+ .|.+|.+....++. ..+++..+++.+|.+++.
T Consensus 704 ~i~~l~~~~~~v~~vGDg-~nD~~al~~Agv---gia~g~g~~~a~~~----ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDG-INDAPALAQADV---GIAMGGGSDVAIET----AAITLMRHSLMGVADALA 765 (834)
T ss_pred HHHHHhhcCCEEEEEeCC-HHHHHHHHhCCe---eEEecCCCHHHHHh----CCEEEecCCHHHHHHHHH
Confidence 344555567899999999 599999999995 77777766555543 345666688999888765
No 189
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.56 E-value=0.0012 Score=62.34 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=28.4
Q ss_pred HHHHHHHHHcC--CCCCcEEEEcCCchhhHHHHHHc
Q 016293 315 FMMDYLANKFG--IQKSQICMVGDRLDTDILFGQNG 348 (392)
Q Consensus 315 ~~~~~~~~~lg--v~~~evi~IGD~l~nDI~ma~~a 348 (392)
..++.+++.++ +++++|++|||+ .+|+.||.-.
T Consensus 196 ~v~~~~~~~~~~~~~~~~vI~vGDs-~~Dl~ma~g~ 230 (277)
T TIGR01544 196 DVALRNTEYFNQLKDRSNIILLGDS-QGDLRMADGV 230 (277)
T ss_pred HHHHHHHHHhCccCCcceEEEECcC-hhhhhHhcCC
Confidence 56667889998 899999999999 5999997644
No 190
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=97.54 E-value=0.0039 Score=57.51 Aligned_cols=78 Identities=10% Similarity=0.143 Sum_probs=51.5
Q ss_pred cHHHHHHHHHHc---CCCCCcEEEEcCCchhhHHHHHHcCC-eEEEEecCCCChhhccCCCCCCCCcE-EECChhhHHHh
Q 016293 313 STFMMDYLANKF---GIQKSQICMVGDRLDTDILFGQNGGC-KTLLVLSGVTSLSMLQSPNNSIQPDF-YTNKISDFLSL 387 (392)
Q Consensus 313 ~p~~~~~~~~~l---gv~~~evi~IGD~l~nDI~ma~~aG~-~~i~V~~G~~~~~~l~~~~~~~~pd~-v~~sl~el~~~ 387 (392)
|...++.+++.. |++-+++++|||+ .||+=.+...+- +.++...|+.=...+.+.+....+.. .-.+-.||++.
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG-~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~ 229 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDG-RNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEI 229 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCC-CCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHH
Confidence 367777777663 7888999999999 699988887665 56777778754333433112223322 22566777777
Q ss_pred HHhh
Q 016293 388 KAAA 391 (392)
Q Consensus 388 ~~~~ 391 (392)
+.++
T Consensus 230 l~~~ 233 (234)
T PF06888_consen 230 LLQL 233 (234)
T ss_pred HHhh
Confidence 7664
No 191
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=97.52 E-value=0.00035 Score=64.79 Aligned_cols=91 Identities=21% Similarity=0.176 Sum_probs=73.2
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
++|++.++|+.|+++ ++++++||+..+ ++.+|+..+ |..++++......||+| +.+.
T Consensus 114 ~~~gv~~~L~~L~~~-~~l~i~Tn~~~~--------~~~~gl~~~-----fd~i~~~~~~~~~KP~p-----~~~~---- 170 (238)
T PRK10748 114 VPQATHDTLKQLAKK-WPLVAITNGNAQ--------PELFGLGDY-----FEFVLRAGPHGRSKPFS-----DMYH---- 170 (238)
T ss_pred CCccHHHHHHHHHcC-CCEEEEECCCch--------HHHCCcHHh-----hceeEecccCCcCCCcH-----HHHH----
Confidence 457899999999875 999999985432 367888877 88999998888888876 3222
Q ss_pred HHHHHHHhcCCCCCCEEEEEeC-cchHHHHHHcCCcee
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGE-DGILKELELAGFQYL 216 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~-~~~~~~l~~~g~~~~ 216 (392)
..++++++.++.+++|+++ ..++...+.+|++.+
T Consensus 171 ---~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 171 ---LAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred ---HHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 6677788888899999998 589999999999865
No 192
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.51 E-value=0.00066 Score=61.98 Aligned_cols=96 Identities=22% Similarity=0.285 Sum_probs=78.2
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
.++++.+.|+.++++ ++++++||. ........++.+|+... |+.++++......||++ .++
T Consensus 100 ~~~~~~~~L~~l~~~-~~l~ilTNg---~~~~~~~~l~~~gl~~~-----Fd~v~~s~~~g~~KP~~------~~f---- 160 (229)
T COG1011 100 DYPEALEALKELGKK-YKLGILTNG---ARPHQERKLRQLGLLDY-----FDAVFISEDVGVAKPDP------EIF---- 160 (229)
T ss_pred cChhHHHHHHHHHhh-ccEEEEeCC---ChHHHHHHHHHcCChhh-----hheEEEecccccCCCCc------HHH----
Confidence 456788888888888 999999993 45566777899998887 99999999999999976 333
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcc-hHHHHHHcCCcee
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDG-ILKELELAGFQYL 216 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~-~~~~l~~~g~~~~ 216 (392)
...++++++.++.+++++++.. ++...+..|+..+
T Consensus 161 --~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~v 196 (229)
T COG1011 161 --EYALEKLGVPPEEALFVGDSLENDILGARALGMKTV 196 (229)
T ss_pred --HHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEE
Confidence 4788888998888999988764 4488899999753
No 193
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.46 E-value=0.00071 Score=64.14 Aligned_cols=95 Identities=19% Similarity=0.219 Sum_probs=74.5
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
++|++.+.|+.|+++|++++|+|| .....+...++.+|+..+ |..+++.+... .+ .+
T Consensus 143 l~pg~~e~L~~L~~~gi~laIvSn---~~~~~~~~~L~~~gl~~~-----F~~vi~~~~~~-~k-------~~------- 199 (273)
T PRK13225 143 LFPGVADLLAQLRSRSLCLGILSS---NSRQNIEAFLQRQGLRSL-----FSVVQAGTPIL-SK-------RR------- 199 (273)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhh-----eEEEEecCCCC-CC-------HH-------
Confidence 578999999999999999999995 456777778899999877 77776654331 12 12
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
.....++++++.++++++++++..++...+.+|+..+.
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVA 237 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEE
Confidence 23366777788888999999999999999999998753
No 194
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.40 E-value=0.00072 Score=75.52 Aligned_cols=98 Identities=17% Similarity=0.250 Sum_probs=81.8
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce-eeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 101 ~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~-~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
+|++.+.|+.|+++|++++|+|| .....+...++.+|+. .+ |+.+++.......||+| +...
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn---~~~~~~~~~L~~~gl~~~~-----Fd~iv~~~~~~~~KP~P-----e~~~---- 225 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASS---ADRIKVDANLAAAGLPLSM-----FDAIVSADAFENLKPAP-----DIFL---- 225 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHcCCChhH-----CCEEEECcccccCCCCH-----HHHH----
Confidence 67888899999999999999996 3556667778899986 45 89999998888888876 3333
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecC
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGG 218 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~ 218 (392)
..++++++.++.+++++++..+++..+++|++.+..
T Consensus 226 ---~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 226 ---AAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred ---HHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 678888999999999999999999999999987653
No 195
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=97.40 E-value=0.00059 Score=62.53 Aligned_cols=98 Identities=16% Similarity=0.116 Sum_probs=68.9
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhC---CceeeccccccceeeecccccCCCCCCCCcchhhh
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL---GLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEI 174 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~l---gl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i 174 (392)
..++|++.++|++|+++|++++|+||. +.......++.. ++... |.+.+.. ....||.| +..
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~---s~~~~~~~~~~~~~~~L~~~-----f~~~fd~--~~g~KP~p-----~~y 158 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSG---SVPAQKLLFGHSDAGNLTPY-----FSGYFDT--TVGLKTEA-----QSY 158 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHhhccccchhhh-----cceEEEe--CcccCCCH-----HHH
Confidence 357999999999999999999999974 334444444443 44333 3333321 11246654 333
Q ss_pred hchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 175 FASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 175 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
. ..++++++.++.++++.++...++..+++|++.+.
T Consensus 159 ~-------~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 159 V-------KIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred H-------HHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 3 67788899899999999999999999999998753
No 196
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.36 E-value=0.0009 Score=63.89 Aligned_cols=102 Identities=15% Similarity=0.074 Sum_probs=72.6
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.+.|+.|+++|++++|+||. +...+...++.++.... ...|..+ +.......||.| +.+.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~---~~~~~~~~l~~~~~~~~--~~~~~~v-~~~~~~~~KP~p-----~~~~--- 209 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTS---NEKAVSKIVNTLLGPER--AQGLDVF-AGDDVPKKKPDP-----DIYN--- 209 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhccccc--cCceEEE-eccccCCCCCCH-----HHHH---
Confidence 35789999999999999999999973 45555566665532222 0012223 445445667765 3333
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecC
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGG 218 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~ 218 (392)
..++++++.++.+++++++..+++..+++|+..+..
T Consensus 210 ----~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 210 ----LAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred ----HHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEE
Confidence 777888998889999999999999999999987643
No 197
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=97.36 E-value=0.00073 Score=59.81 Aligned_cols=95 Identities=17% Similarity=0.282 Sum_probs=75.6
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccC----CCCCCCCcchhhh
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRI----PSPNSSEFSQEEI 174 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~----~~~~~~~~~~e~i 174 (392)
.+.+++.++|+.|+ .+++++||+ +...+...++.+|+... |..+++...... .||.| +..
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~---~~~~~~~~l~~~gl~~~-----fd~i~~~~~~~~~~~~~KP~p-----~~~ 147 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNG---DRAHARRALNRLGIEDC-----FDGIFCFDTANPDYLLPKPSP-----QAY 147 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCC---CHHHHHHHHHHcCcHhh-----hCeEEEeecccCccCCCCCCH-----HHH
Confidence 46788999999987 479999974 45667788899999877 899999877665 47765 322
Q ss_pred hchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 175 FASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 175 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
...++++++.++++++++++...+...++.|++.+
T Consensus 148 -------~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i 182 (184)
T TIGR01993 148 -------EKALREAGVDPERAIFFDDSARNIAAAKALGMKTV 182 (184)
T ss_pred -------HHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEe
Confidence 36777888888899999999989999999998763
No 198
>PRK11590 hypothetical protein; Provisional
Probab=97.35 E-value=0.0051 Score=55.90 Aligned_cols=37 Identities=16% Similarity=-0.036 Sum_probs=28.0
Q ss_pred HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEe
Q 016293 318 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL 356 (392)
Q Consensus 318 ~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~ 356 (392)
..+.+.+|.+.+++.+-||+ .+|+.|++.+|- .+.|.
T Consensus 166 ~~l~~~~~~~~~~~~aY~Ds-~~D~pmL~~a~~-~~~vn 202 (211)
T PRK11590 166 AQLERKIGTPLRLYSGYSDS-KQDNPLLYFCQH-RWRVT 202 (211)
T ss_pred HHHHHHhCCCcceEEEecCC-cccHHHHHhCCC-CEEEC
Confidence 34444557777889999999 599999999994 44443
No 199
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.29 E-value=0.00086 Score=56.52 Aligned_cols=68 Identities=25% Similarity=0.253 Sum_probs=49.1
Q ss_pred eeeecccCCCccccCCCcHHHHHHHHHH-cC----CCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChh
Q 016293 296 GAFVGSTQREPLVVGKPSTFMMDYLANK-FG----IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS 363 (392)
Q Consensus 296 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~-lg----v~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~ 363 (392)
..++.-.+.....+.+-+|..-.+..+. +| ..++|++||||++.+||-||+..|..++|+..|....+
T Consensus 102 k~le~k~gIpVlRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~ 174 (190)
T KOG2961|consen 102 KALEAKIGIPVLRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEE 174 (190)
T ss_pred HHHHHhhCCceEeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccccccc
Confidence 3344444444444455555555555544 34 57899999999999999999999999999999886543
No 200
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=97.28 E-value=0.001 Score=60.73 Aligned_cols=95 Identities=13% Similarity=0.141 Sum_probs=75.1
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccc-eeeecccccCCCCCCCCcchhhhhch
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFL-SIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~-~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
.++|++.++|+.| +++++|+||. +...+...++.+|+... |. .+++.......||+| +.+.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~---~~~~~~~~l~~~~l~~~-----F~~~v~~~~~~~~~KP~p-----~~~~-- 149 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNG---PVSKMQHSLGKTGMLHY-----FPDKLFSGYDIQRWKPDP-----ALMF-- 149 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCC---cHHHHHHHHHhcChHHh-----CcceEeeHHhcCCCCCCh-----HHHH--
Confidence 4577888888887 5999999973 44567777888999877 75 566666667788876 3333
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
..++++++.++.+++++++..+++..+++|++.+
T Consensus 150 -----~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 150 -----HAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred -----HHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 7788889988899999999999999999999875
No 201
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.28 E-value=0.00037 Score=63.88 Aligned_cols=63 Identities=14% Similarity=0.230 Sum_probs=49.3
Q ss_pred hcCcEEEEEccCceecCC---------------------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHH
Q 016293 81 DSVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~---------------------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~ 133 (392)
+...+++||+|-|++++. ..+|++.++++.|+++|++++++||++........
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 357899999999998732 24678999999999999999999944333334477
Q ss_pred HhhHhCCcee
Q 016293 134 KKFETLGLTV 143 (392)
Q Consensus 134 ~~l~~lgl~~ 143 (392)
+.|...|++.
T Consensus 155 ~nL~~~G~~~ 164 (229)
T TIGR01675 155 DNLINAGFTG 164 (229)
T ss_pred HHHHHcCCCC
Confidence 8888888864
No 202
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.27 E-value=0.0021 Score=70.63 Aligned_cols=68 Identities=16% Similarity=0.292 Sum_probs=50.1
Q ss_pred EEEccCceecCCeeCCCHHHHHHHHH----HCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCC
Q 016293 87 IFDCDGVIWKGDKLIDGVPETLDMLR----SKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIP 162 (392)
Q Consensus 87 ifDlDGTL~d~~~~~~~~~eal~~l~----~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~ 162 (392)
+.|+|+| .. ..+..++.++.++ +..+-++++| ||+...+...+...+++.. .|+.+||..|..+.
T Consensus 776 a~D~d~~-~~---~~~~l~~~~~~~~~~~~~~~igfv~aT---GR~l~~~~~~l~~~~lp~~----~PD~lI~~vGTeIy 844 (1050)
T TIGR02468 776 AVDCYDD-KD---LLQIIKNIFEAVRKERMEGSSGFILST---SMTISEIQSFLKSGGLNPT----DFDALICNSGSELY 844 (1050)
T ss_pred EeccCCC-CC---hHHHHHHHHHHHhccccCCceEEEEEc---CCCHHHHHHHHHhCCCCCC----CCCEEEeCCCccee
Confidence 3799999 22 2222444455554 2337888999 9999999999999999752 18899999998888
Q ss_pred CCC
Q 016293 163 SPN 165 (392)
Q Consensus 163 ~~~ 165 (392)
.+.
T Consensus 845 y~~ 847 (1050)
T TIGR02468 845 YPS 847 (1050)
T ss_pred ccC
Confidence 763
No 203
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.27 E-value=0.0017 Score=71.53 Aligned_cols=60 Identities=20% Similarity=0.273 Sum_probs=47.4
Q ss_pred cCcEEEEEccC-----ce----ecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 82 SVETFIFDCDG-----VI----WKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 82 ~ik~vifDlDG-----TL----~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
.++.++|=.++ ++ .-.+.+.|++.++|+.|++.|+++.++| |..........+.+|+...
T Consensus 502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miT---GD~~~tA~~ia~~~Gi~~~ 570 (884)
T TIGR01522 502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMIT---GDSQETAVSIARRLGMPSK 570 (884)
T ss_pred CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCCCC
Confidence 46777776554 22 2367788999999999999999999999 7788888888888888543
No 204
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.24 E-value=0.00027 Score=65.20 Aligned_cols=63 Identities=24% Similarity=0.428 Sum_probs=53.6
Q ss_pred hcCcEEEEEccCceecCC---------------------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHH
Q 016293 81 DSVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~---------------------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~ 133 (392)
++..+|+||+|+|++++. ..+|++.+.++.++++|+.++++||+.........
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE 149 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence 457899999999987621 46899999999999999999999988777777888
Q ss_pred HhhHhCCcee
Q 016293 134 KKFETLGLTV 143 (392)
Q Consensus 134 ~~l~~lgl~~ 143 (392)
+-|...|+..
T Consensus 150 ~nL~~~G~~~ 159 (229)
T PF03767_consen 150 KNLKKAGFPG 159 (229)
T ss_dssp HHHHHHTTST
T ss_pred HHHHHcCCCc
Confidence 8899889764
No 205
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.21 E-value=0.0025 Score=54.85 Aligned_cols=52 Identities=19% Similarity=0.297 Sum_probs=42.1
Q ss_pred EEEEEccCceecCC------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCH---HHHHHhhHhC
Q 016293 85 TFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSR---KQYGKKFETL 139 (392)
Q Consensus 85 ~vifDlDGTL~d~~------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~---~~~~~~l~~l 139 (392)
.|++|+||||+.+. ...+++.+..+.++++|++++.+| +|+. .....+|...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlT---aRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLT---ARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEEC---cCcHHHHHHHHHHHHHH
Confidence 48999999999864 245789999999999999999999 6775 3455666655
No 206
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.12 E-value=0.0029 Score=64.57 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=73.9
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSF 179 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~ 179 (392)
++|++.+.|+.|+++|++++|+|| .+...+...++.+|+..+ |..+++..+.. .+|+| +.+.
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~---~~~~~~~~~l~~~~l~~~-----f~~i~~~d~v~-~~~kP-----~~~~---- 392 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASN---GLTEYLRAIVSYYDLDQW-----VTETFSIEQIN-SLNKS-----DLVK---- 392 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHCCcHhh-----cceeEecCCCC-CCCCc-----HHHH----
Confidence 478999999999999999999995 566777888899999877 88898887653 34444 2222
Q ss_pred HHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 180 AAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 180 ~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..+++++ ++.+++++++..++...+++|+..+.
T Consensus 393 ---~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~ 425 (459)
T PRK06698 393 ---SILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIG 425 (459)
T ss_pred ---HHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEE
Confidence 4444443 46899999999999999999998654
No 207
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.99 E-value=0.0075 Score=66.71 Aligned_cols=44 Identities=16% Similarity=0.284 Sum_probs=37.8
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
.+.+.+++.++|+.+++.|+++.++| |..........+.+|+..
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miT---GD~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMIT---GDNKETAEAICRRIGIFS 578 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEec---CCCHHHHHHHHHHcCCCC
Confidence 34567899999999999999999999 788888888888888854
No 208
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.94 E-value=0.013 Score=63.24 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=44.3
Q ss_pred cCcEEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 82 ~ik~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
..+.+++=.||+++- ...+.+++.++|++|+++|++++++| |..........+.+|+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llT---Gd~~~~a~~ia~~lgi 607 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLT---GDNPRAAAAIAGELGI 607 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCC
Confidence 356788878887653 67788999999999999999999999 5666665555555555
No 209
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=96.82 E-value=0.005 Score=55.32 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=73.3
Q ss_pred EEEEEccCcee----cCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc
Q 016293 85 TFIFDCDGVIW----KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR 160 (392)
Q Consensus 85 ~vifDlDGTL~----d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~ 160 (392)
.+.+.++++++ ....+.|++.++|+.|++.|+++.++| |..........+.+|+... ++..+-.
T Consensus 109 ~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~T---GD~~~~a~~~~~~lgi~~~--------~v~a~~~- 176 (215)
T PF00702_consen 109 VIVLAVNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILT---GDNESTASAIAKQLGIFDS--------IVFARVI- 176 (215)
T ss_dssp CEEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEE---SSEHHHHHHHHHHTTSCSE--------EEEESHE-
T ss_pred ccceeecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeee---ccccccccccccccccccc--------ccccccc-
Confidence 34444455543 356788999999999999999999999 7788888888899999542 1111111
Q ss_pred CCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcC
Q 016293 161 IPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAG 212 (392)
Q Consensus 161 ~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g 212 (392)
.+|.+ ......+++++..++..+++++...+...++++|
T Consensus 177 -~kP~~------------k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 -GKPEP------------KIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -TTTHH------------HHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -ccccc------------hhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 33321 2224677777877778899999999988888765
No 210
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.82 E-value=0.0022 Score=60.01 Aligned_cols=62 Identities=18% Similarity=0.354 Sum_probs=49.3
Q ss_pred cCcEEEEEccCceecC-------------------C---------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHH
Q 016293 82 SVETFIFDCDGVIWKG-------------------D---------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~-------------------~---------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~ 133 (392)
...+++||+|+|++++ . ..+|++.+..+.++++|++++++||+.........
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 4589999999999841 0 23678899999999999999999966555556677
Q ss_pred HhhHhCCcee
Q 016293 134 KKFETLGLTV 143 (392)
Q Consensus 134 ~~l~~lgl~~ 143 (392)
+.|...|+..
T Consensus 180 ~NL~kaGy~~ 189 (275)
T TIGR01680 180 ANLKKAGYHT 189 (275)
T ss_pred HHHHHcCCCC
Confidence 8888888864
No 211
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=96.70 E-value=0.068 Score=58.63 Aligned_cols=57 Identities=16% Similarity=0.273 Sum_probs=45.1
Q ss_pred cCcEEEEEccCceecC--C-------------eeCCCHHHHHHHHHHC-CCcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 82 SVETFIFDCDGVIWKG--D-------------KLIDGVPETLDMLRSK-GKRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~--~-------------~~~~~~~eal~~l~~~-Gi~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
+-++++||+||||..- . .+.++..++|+.|.+. +-.++|+| ||+...+...+..+++
T Consensus 590 ~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVS---GR~~~~Le~~fg~~~L 662 (934)
T PLN03064 590 NNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLS---GSDRSVLDENFGEFDM 662 (934)
T ss_pred cceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEe---CCCHHHHHHHhCCCCc
Confidence 3479999999999751 1 1345678899999886 67899999 9999999999876554
No 212
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=96.69 E-value=0.0034 Score=54.70 Aligned_cols=108 Identities=11% Similarity=-0.002 Sum_probs=70.5
Q ss_pred cEEEEEccCceecCC-------------------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHh
Q 016293 84 ETFIFDCDGVIWKGD-------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET 138 (392)
Q Consensus 84 k~vifDlDGTL~d~~-------------------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~ 138 (392)
+.+++|+|+||+.+. ..-|++.++|+.+.+. +.++|.|+. +...+...++.
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~---~~~yA~~il~~ 77 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTAS---LEEYADPVLDI 77 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCC---cHHHHHHHHHH
Confidence 478999999997621 1357899999999988 999999953 44555566677
Q ss_pred CCcee-eccccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce
Q 016293 139 LGLTV-TEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 139 lgl~~-~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
++... . |..+++.+.....++. .. +.+...+...++.+++.+.........+.|+++
T Consensus 78 ldp~~~~-----f~~~l~r~~~~~~~~~--------~~-------K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 78 LDRGGKV-----ISRRLYRESCVFTNGK--------YV-------KDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred HCcCCCE-----EeEEEEccccEEeCCC--------EE-------eEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 76543 3 5556665444333321 11 334444566677888888776665555556554
No 213
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=96.54 E-value=0.01 Score=54.18 Aligned_cols=102 Identities=17% Similarity=0.215 Sum_probs=73.9
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCC-ceeeccccccceeee--cccccCCCCCCCCcchhh
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLG-LTVTEVKDSFLSIVC--LKFHRIPSPNSSEFSQEE 173 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lg-l~~~~~~~~f~~~i~--~~~~~~~~~~~~~~~~e~ 173 (392)
...+.||+.+.++.|+.+|+++.++|+.+..+... .+..++ +... |..+++ .......||+| +.
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~---k~~~~~~~~~~-----f~~~v~~d~~~v~~gKP~P-----di 156 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFEL---KISRHEDIFKN-----FSHVVLGDDPEVKNGKPDP-----DI 156 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHH---HHHHhhHHHHh-----cCCCeecCCccccCCCCCc-----hH
Confidence 44678899999999999999999999654444443 333333 2222 556677 55566778887 43
Q ss_pred hhchHHHHHHHHHhcCCCC-CCEEEEEeCcchHHHHHHcCCceecC
Q 016293 174 IFASSFAAAAYLKSIDFPK-DKKVYVVGEDGILKELELAGFQYLGG 218 (392)
Q Consensus 174 i~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~~~~~l~~~g~~~~~~ 218 (392)
.+ ...+.++..+ .+++.+.++..-++..+++|.+.+..
T Consensus 157 ~l-------~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v 195 (222)
T KOG2914|consen 157 YL-------KAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGV 195 (222)
T ss_pred HH-------HHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEe
Confidence 33 5556667777 88899999999999999999988643
No 214
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.36 E-value=0.014 Score=54.65 Aligned_cols=75 Identities=20% Similarity=0.246 Sum_probs=59.4
Q ss_pred hcCcEEEEEccCceecCCe----eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeec
Q 016293 81 DSVETFIFDCDGVIWKGDK----LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCL 156 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~~----~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~ 156 (392)
..-..|+||||-||+++.. ..|.+.+.+..|+++|..+++=| .-...-+...++.+++... |..|+|.
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWS---yG~~eHV~~sl~~~~L~~~-----Fd~ii~~ 191 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWS---YGNREHVRHSLKELKLEGY-----FDIIICG 191 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEec---CCCHHHHHHHHHHhCCccc-----cEEEEeC
Confidence 4567999999999997433 24578999999999999888888 4567788888999999877 8888886
Q ss_pred ccccCCC
Q 016293 157 KFHRIPS 163 (392)
Q Consensus 157 ~~~~~~~ 163 (392)
+......
T Consensus 192 G~~~~~~ 198 (297)
T PF05152_consen 192 GNKAGEY 198 (297)
T ss_pred CccCCcC
Confidence 5555443
No 215
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.33 E-value=0.0091 Score=54.29 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=27.5
Q ss_pred eCCCHHHHHH-HHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 100 LIDGVPETLD-MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 100 ~~~~~~eal~-~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
++|++.+.|+ .++++|++++|+|| .+..-+....+..++
T Consensus 95 l~pga~e~L~~~l~~~G~~v~IvSa---s~~~~~~~ia~~~~~ 134 (210)
T TIGR01545 95 AFPLVAERLRQYLESSDADIWLITG---SPQPLVEAVYFDSNF 134 (210)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEcC---CcHHHHHHHHHhccc
Confidence 4688999995 78889999999995 344444444444443
No 216
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.15 E-value=0.012 Score=54.23 Aligned_cols=97 Identities=23% Similarity=0.269 Sum_probs=78.1
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
...++..++++.||++|..+.+.||...| +...+..+|+... |+.++++-.....||.| .|+
T Consensus 113 ~~~~~~~~~lq~lR~~g~~l~iisN~d~r----~~~~l~~~~l~~~-----fD~vv~S~e~g~~KPDp------~If--- 174 (237)
T KOG3085|consen 113 KYLDGMQELLQKLRKKGTILGIISNFDDR----LRLLLLPLGLSAY-----FDFVVESCEVGLEKPDP------RIF--- 174 (237)
T ss_pred eeccHHHHHHHHHHhCCeEEEEecCCcHH----HHHHhhccCHHHh-----hhhhhhhhhhccCCCCh------HHH---
Confidence 45667779999999999999999985433 3466788999866 99999999999999866 555
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCc-chHHHHHHcCCcee
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGED-GILKELELAGFQYL 216 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~-~~~~~l~~~g~~~~ 216 (392)
...++..++.++.++++++.. .+++..+..|+...
T Consensus 175 ---~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ai 210 (237)
T KOG3085|consen 175 ---QLALERLGVKPEECVHIGDLLENDYEGARNLGWHAI 210 (237)
T ss_pred ---HHHHHHhCCChHHeEEecCccccccHhHHHcCCEEE
Confidence 467888899999999998875 45889999998753
No 217
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.08 E-value=0.01 Score=54.11 Aligned_cols=63 Identities=17% Similarity=0.395 Sum_probs=53.4
Q ss_pred cCcEEEEEccCceecCC---------------------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCC-HHHHH
Q 016293 82 SVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKS-RKQYG 133 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~---------------------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~-~~~~~ 133 (392)
+-++|+.|+|-|++|.. ..+|++.++++...++|..++++||+.... .....
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~ 157 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTI 157 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhH
Confidence 45599999999999833 368999999999999999999999977666 46678
Q ss_pred HhhHhCCceee
Q 016293 134 KKFETLGLTVT 144 (392)
Q Consensus 134 ~~l~~lgl~~~ 144 (392)
+-|..+|++..
T Consensus 158 ~nLk~~g~~~~ 168 (274)
T COG2503 158 ENLKSEGLPQV 168 (274)
T ss_pred HHHHHcCcccc
Confidence 88999999854
No 218
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.06 E-value=0.076 Score=56.72 Aligned_cols=55 Identities=22% Similarity=0.370 Sum_probs=45.8
Q ss_pred EEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 85 TFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 85 ~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
.+++-.||.+.- ...+-+++.++|++|+++|++++++| |-........-+++|++
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLT---GDn~~~A~~iA~~lGId 577 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLT---GDNRRTAEAIAKELGID 577 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcChH
Confidence 699999997643 77888999999999999999999999 66666666666777774
No 219
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=96.04 E-value=0.042 Score=50.05 Aligned_cols=108 Identities=9% Similarity=0.094 Sum_probs=66.5
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecccccc--ceeeecccccCCCCCCCCcchhhhhc
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSF--LSIVCLKFHRIPSPNSSEFSQEEIFA 176 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f--~~~i~~~~~~~~~~~~~~~~~e~i~~ 176 (392)
.+.|++.+.|+.++++|++++|+|| .....+...++.+ +.... -| ...+..++....+|+|.....+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~-~~~~~---i~~n~~~~~~~~~~~~kp~p~~~~~~~~-- 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSG---GMDFFVYPLLQGL-IPKEQ---IYCNGSDFSGEYITITWPHPCDEHCQNH-- 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECC---CcHHHHHHHHHHh-CCcCc---EEEeEEEecCCeeEEeccCCcccccccc--
Confidence 4688999999999999999999996 3455666667766 53210 01 122333334445555421100000
Q ss_pred hHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce
Q 016293 177 SSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 177 ~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
....-...+++++..++.+++++++..++..++.+|+.+
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~ 183 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF 183 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence 000011345555666778999999999999999988855
No 220
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.64 E-value=0.012 Score=50.17 Aligned_cols=79 Identities=20% Similarity=0.196 Sum_probs=53.6
Q ss_pred HHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccC-CCcHHHHHHHHHHcCCCCCcEEEEcCCc
Q 016293 260 TLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVG-KPSTFMMDYLANKFGIQKSQICMVGDRL 338 (392)
Q Consensus 260 ~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g-KP~p~~~~~~~~~lgv~~~evi~IGD~l 338 (392)
+..+.......+|.|..+......... -.| .+....| +.|-.+|+.+++++++.+++|.+|||.+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~-~LG-------------I~~~~qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~ 109 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAK-DLG-------------IKHLYQGISDKLAAFEELLKKLNLDPEEVAYVGDDL 109 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHH-HcC-------------CceeeechHhHHHHHHHHHHHhCCCHHHhhhhcCcc
Confidence 344544455577888777643222111 111 1111223 5578889999999999999999999995
Q ss_pred hhhHHHHHHcCCeEE
Q 016293 339 DTDILFGQNGGCKTL 353 (392)
Q Consensus 339 ~nDI~ma~~aG~~~i 353 (392)
+|+.+.+.+|+..+
T Consensus 110 -~Dlpvm~~vGls~a 123 (170)
T COG1778 110 -VDLPVMEKVGLSVA 123 (170)
T ss_pred -ccHHHHHHcCCccc
Confidence 99999999997544
No 221
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=95.61 E-value=0.015 Score=50.80 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=64.8
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
-.++|++.++|+ +++|+||. +...+...++.+|+... |..+++.+.....||+| +..
T Consensus 89 ~~~~~g~~~~L~-------~~~i~Tn~---~~~~~~~~l~~~~l~~~-----fd~v~~~~~~~~~KP~p-----~~f--- 145 (175)
T TIGR01493 89 LPPWPDSAAALA-------RVAILSNA---SHWAFDQFAQQAGLPWY-----FDRAFSVDTVRAYKPDP-----VVY--- 145 (175)
T ss_pred CCCCCchHHHHH-------HHhhhhCC---CHHHHHHHHHHCCCHHH-----HhhhccHhhcCCCCCCH-----HHH---
Confidence 357889999998 37899974 45566677888999877 88888888878889876 322
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHH
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELE 209 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~ 209 (392)
...++++++.++.+++++++..++...+
T Consensus 146 ----~~~~~~~~~~p~~~l~vgD~~~Di~~A~ 173 (175)
T TIGR01493 146 ----ELVFDTVGLPPDRVLMVAAHQWDLIGAR 173 (175)
T ss_pred ----HHHHHHHCCCHHHeEeEecChhhHHHHh
Confidence 2677778888899999999876655443
No 222
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=95.59 E-value=0.036 Score=48.52 Aligned_cols=107 Identities=19% Similarity=0.103 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCC----ccceeeecccCCCccccCCCcHHHHHHHHHHcCCC
Q 016293 252 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGG----SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ 327 (392)
Q Consensus 252 ~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~ 327 (392)
-|+.+...+..++..+-..+++|..+........+...+.. ............+ ...| +|-..|+.+.+..|++
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~e-I~~g-sK~~Hf~~i~~~tgI~ 123 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLE-IYPG-SKTTHFRRIHRKTGIP 123 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEE-ESSS--HHHHHHHHHHHH---
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhh-eecC-chHHHHHHHHHhcCCC
Confidence 37788888989887544566766444321111111111222 0000111111111 1123 7788899999999999
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCC
Q 016293 328 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS 361 (392)
Q Consensus 328 ~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~ 361 (392)
.+++++|.|. ...++-.+..|+.+++|..|.+.
T Consensus 124 y~eMlFFDDe-~~N~~~v~~lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 124 YEEMLFFDDE-SRNIEVVSKLGVTCVLVPDGLTW 156 (169)
T ss_dssp GGGEEEEES--HHHHHHHHTTT-EEEE-SSS--H
T ss_pred hhHEEEecCc-hhcceeeEecCcEEEEeCCCCCH
Confidence 9999999999 68899999999999999998754
No 223
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.56 E-value=0.14 Score=57.29 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=38.4
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
..+-+++.++|++++++|++++++| ||+........+.+|+..
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~~gi~~ 609 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVT---GDHPITAKAIAKGVGIIS 609 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCCC
Confidence 3456789999999999999999999 999999999999999853
No 224
>PHA02597 30.2 hypothetical protein; Provisional
Probab=95.56 E-value=0.088 Score=46.94 Aligned_cols=97 Identities=10% Similarity=0.043 Sum_probs=62.2
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
.++|++.+.|+.|++++ +++++||.+.... ...++.+++..... +-|..+++.+.. +|+| +.+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~---~~~~~~~~l~~~f~-~~f~~i~~~~~~---~~kp-----~~~---- 136 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSID---ALLNRQFNLNALFP-GAFSEVLMCGHD---ESKE-----KLF---- 136 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchh---HHHHhhCCHHHhCC-CcccEEEEeccC---cccH-----HHH----
Confidence 46899999999999975 6777886433322 22334555542200 015566766653 2322 322
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHc--CCceec
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELA--GFQYLG 217 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~--g~~~~~ 217 (392)
...+++++ ++.+++++++...+...+++ |++.+.
T Consensus 137 ---~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 137 ---IKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred ---HHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 26666677 55678999999999999998 998753
No 225
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=95.34 E-value=0.12 Score=48.88 Aligned_cols=100 Identities=10% Similarity=0.049 Sum_probs=62.9
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecccccccee------eecccccCCCCCCCCcch
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSI------VCLKFHRIPSPNSSEFSQ 171 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~------i~~~~~~~~~~~~~~~~~ 171 (392)
-.+.|++.+.++.|+++|++++|+|+ -...-+...|+++|+... +..+ +..+|....++.| .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~vL~~lgl~~~-----~~~IvSN~L~f~~dGvltG~~~P----~ 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEVLRQAGVYHP-----NVKVVSNFMDFDEDGVLKGFKGP----L 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHHcCCCCc-----CceEEeeeEEECCCCeEeCCCCC----c
Confidence 45788999999999999999999994 455677777888888533 3334 3345666665433 1
Q ss_pred hhhhchHHHHH-HHHHhcC--CCCCCEEEEEeCcchHHHHH
Q 016293 172 EEIFASSFAAA-AYLKSID--FPKDKKVYVVGEDGILKELE 209 (392)
Q Consensus 172 e~i~~~~~~~~-~~l~~~~--~~~~~~~~v~~~~~~~~~l~ 209 (392)
-........+. ...+.++ ..+.++++++++..++....
T Consensus 188 i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 188 IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 11111122221 2333334 45667888888887776643
No 226
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.26 E-value=0.02 Score=50.57 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=30.2
Q ss_pred HHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 105 PETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 105 ~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
.+.|+.++++|++++|+| +-+..-+...++.+|++..
T Consensus 95 ~e~i~~~~~~~~~v~IvS---~~~~~~i~~~~~~~~i~~~ 131 (192)
T PF12710_consen 95 MELIRELKDNGIKVVIVS---GSPDEIIEPIAERLGIDDD 131 (192)
T ss_dssp HHHHHHHHHTTSEEEEEE---EEEHHHHHHHHHHTTSSEG
T ss_pred HHHHHHHHHCCCEEEEEC---CCcHHHHHHHHHHcCCCce
Confidence 399999999999999999 5566667777788998753
No 227
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=95.15 E-value=0.35 Score=51.49 Aligned_cols=57 Identities=19% Similarity=0.281 Sum_probs=43.2
Q ss_pred cCcEEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 82 ~ik~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
..+.+++-.|++++- ...+-|++.+++++|++.|++++++| |..........+++|+
T Consensus 425 G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miT---GD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 425 GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMIT---GDNRLTAAAIAAEAGV 485 (675)
T ss_pred CCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCC
Confidence 356677777777644 67778899999999999999999999 6666665555555555
No 228
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=95.14 E-value=0.15 Score=44.10 Aligned_cols=39 Identities=13% Similarity=-0.063 Sum_probs=29.4
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
+.|++.++|+.+.+. +.++|+||. +.......++.++..
T Consensus 59 ~rPgv~efL~~l~~~-yel~I~T~~---~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 59 LRPFLHEFLKEASKL-YEMHVYTMG---TRAYAQAIAKLIDPD 97 (156)
T ss_pred ECCCHHHHHHHHHhh-cEEEEEeCC---cHHHHHHHHHHhCcC
Confidence 368999999999965 999999964 444555556777665
No 229
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=94.93 E-value=0.042 Score=49.03 Aligned_cols=39 Identities=31% Similarity=0.444 Sum_probs=26.1
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCC----CHHHHHHhhH
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTK----SRKQYGKKFE 137 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr----~~~~~~~~l~ 137 (392)
.++|++.++|++|.+.|..++++|.++.. ......+.++
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~ 115 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLE 115 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHH
Confidence 36789999999999999878877744333 2344455554
No 230
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.90 E-value=0.58 Score=42.35 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=29.0
Q ss_pred CCCCCcEEEEcCCchhhHH-HHHHcCCeEEEEecCCC
Q 016293 325 GIQKSQICMVGDRLDTDIL-FGQNGGCKTLLVLSGVT 360 (392)
Q Consensus 325 gv~~~evi~IGD~l~nDI~-ma~~aG~~~i~V~~G~~ 360 (392)
|+.-++.++|||+ .||+= +.+-.+.+.+....|+.
T Consensus 179 gv~yer~iYvGDG-~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 179 GVRYERLIYVGDG-ANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred CCceeeEEEEcCC-CCCcCcchhcccCceecccCCCc
Confidence 7888899999999 79974 66777778888888874
No 231
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=94.89 E-value=0.19 Score=48.84 Aligned_cols=106 Identities=11% Similarity=0.071 Sum_probs=67.2
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecccccc-ceeeecccccCCCCCCCCcchhhhhchH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSF-LSIVCLKFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f-~~~i~~~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
+.|++.+.|+.|++.|++++|+|+. ........++.+|++.. | |.....++......... + -.-....
T Consensus 182 l~pGa~elL~~Lk~~G~~~aIvSgg---~~~~~~~l~~~Lgld~~-----~an~lei~dg~ltg~v~g~-i--v~~k~K~ 250 (322)
T PRK11133 182 LMPGLTELVLKLQALGWKVAIASGG---FTYFADYLRDKLRLDAA-----VANELEIMDGKLTGNVLGD-I--VDAQYKA 250 (322)
T ss_pred CChhHHHHHHHHHHcCCEEEEEECC---cchhHHHHHHHcCCCeE-----EEeEEEEECCEEEeEecCc-c--CCcccHH
Confidence 5788999999999999999999963 33333444567887532 1 11111112111110000 0 0001223
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
.....+++++++.++.++++++...++..++.+|+.+.
T Consensus 251 ~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 251 DTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 44568888889988999999999999999999998764
No 232
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.88 E-value=0.1 Score=57.67 Aligned_cols=43 Identities=21% Similarity=0.228 Sum_probs=37.1
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
.+.+-|++.++|+.+++.|+++.++| |-.........+++|+.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miT---GD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILT---GDSELVAAKVCHEVGLD 590 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCC
Confidence 45667899999999999999999999 77788877778888884
No 233
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.80 E-value=0.031 Score=48.17 Aligned_cols=53 Identities=25% Similarity=0.363 Sum_probs=35.5
Q ss_pred cEEEEEccCceecCCe--------------------eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCC
Q 016293 84 ETFIFDCDGVIWKGDK--------------------LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLG 140 (392)
Q Consensus 84 k~vifDlDGTL~d~~~--------------------~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lg 140 (392)
|++++|+||||+.... .-|++.++|+.+.+. +.++|.|.. +.......++.+.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~---~~~ya~~v~~~ld 73 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSA---SEEYAEPVLDALD 73 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS----HHHHHHHHHHHT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEee---hhhhhhHHHHhhh
Confidence 5899999999987221 468999999999554 999999953 4444444455444
No 234
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.71 E-value=0.23 Score=55.89 Aligned_cols=43 Identities=9% Similarity=0.092 Sum_probs=37.6
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
+.+-+++.++|+.+++.|+++.++| |........+.+++|+..
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiT---GD~~~tA~~iA~~~Gi~~ 687 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLT---GDFPETAKAIAQEVGIIP 687 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHcCCCC
Confidence 3456789999999999999999999 888888888888899853
No 235
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=94.68 E-value=0.19 Score=56.05 Aligned_cols=44 Identities=20% Similarity=0.204 Sum_probs=37.9
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
.+.+-+++.++|+.+++.|+++.++| |..........+++|+..
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miT---GD~~~tA~~iA~~~GI~~ 620 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVT---GDNIDTAKAIARNCGILT 620 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEEC---CCChHHHHHHHHHcCCCC
Confidence 55677899999999999999999999 778888877778888853
No 236
>PRK08238 hypothetical protein; Validated
Probab=94.68 E-value=0.13 Score=52.56 Aligned_cols=95 Identities=17% Similarity=0.098 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
+++..+.++.+++.+...+++|+........... ..+ +++.+....+. ...||++.. +.+.+.++ .++++
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~-~lG---lFd~Vigsd~~---~~~kg~~K~-~~l~~~l~--~~~~~ 143 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATASDERLAQAVAA-HLG---LFDGVFASDGT---TNLKGAAKA-AALVEAFG--ERGFD 143 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH-HcC---CCCEEEeCCCc---cccCCchHH-HHHHHHhC--ccCee
Confidence 3556777777776666678889887644322111 112 13333333222 235554442 33446665 35699
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecCC
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSGV 359 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G~ 359 (392)
++||+ .+|+++++.+| ..+.|..+.
T Consensus 144 yvGDS-~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 144 YAGNS-AADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred EecCC-HHHHHHHHhCC-CeEEECCCH
Confidence 99999 69999999999 888887754
No 237
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=94.64 E-value=0.19 Score=45.61 Aligned_cols=109 Identities=7% Similarity=0.115 Sum_probs=63.0
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecccccc--ceeeecccccCCCCCCCCcchhhhh
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSF--LSIVCLKFHRIPSPNSSEFSQEEIF 175 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f--~~~i~~~~~~~~~~~~~~~~~e~i~ 175 (392)
..+.|++.+.++.++++|++++|+|+ .....+...++.++.... -| ...+..++....+|++.......
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~~~~~~----i~~n~~~~~~~~~~~~~p~~~~~~~~~-- 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISG---GMDFFVYPLLEGIVEKDR----IYCNEADFSNEYIHIDWPHPCDGTCQN-- 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHhhCCccc----EEeceeEeeCCeeEEeCCCCCcccccc--
Confidence 46789999999999999999999995 355566666776643222 01 11222233334445542110000
Q ss_pred chHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce
Q 016293 176 ASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 176 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
.+...-...++++...++..++++++..++..++.+++-+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ 179 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCF 179 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeE
Confidence 0000001223333334567899999999999888888744
No 238
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.52 E-value=0.18 Score=55.55 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=36.7
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
.+.+-+++.++|+.+++.|++++++| |-.........+++|+.
T Consensus 513 ~Dp~R~~~~~aI~~l~~aGI~vvmiT---GD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKNGINVKVLT---GDNEIVTARICQEVGID 555 (867)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCC
Confidence 55667899999999999999999999 77777777777888884
No 239
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=94.48 E-value=0.24 Score=42.98 Aligned_cols=100 Identities=16% Similarity=0.056 Sum_probs=60.5
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeec--ccccCCCCCCCCcchhhhhch
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCL--KFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~--~~~~~~~~~~~~~~~e~i~~~ 177 (392)
+.|++.+.++.++++|++++|+|+ .....+...++.+|+... |.-.+.. ++.....+..+.... -...
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~~~-----~~~~~~~~~~g~~~g~~~~~~~~~--~~~K 143 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGIDDV-----FANRLEFDDNGLLTGPIEGQVNPE--GECK 143 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCchh-----eeeeEEECCCCEEeCccCCcccCC--cchH
Confidence 568999999999999999999994 455667777788888633 2222222 221121111100000 0111
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHH
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELE 209 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~ 209 (392)
...+.++++++++..+..++++++..++..++
T Consensus 144 ~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~ 175 (177)
T TIGR01488 144 GKVLKELLEESKITLKKIIAVGDSVNDLPMLK 175 (177)
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHh
Confidence 23344566666776677889988887776654
No 240
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=94.48 E-value=0.18 Score=55.78 Aligned_cols=43 Identities=19% Similarity=0.207 Sum_probs=36.8
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
.+.+-|++.++|+.+++.|+++.++| |-.........+++|+.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miT---GD~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 548 LDPPKESAAPAIAALRENGVAVKVLT---GDNPIVTAKICREVGLE 590 (903)
T ss_pred cCccHHHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCC
Confidence 55677899999999999999999999 77777777777888884
No 241
>PLN02954 phosphoserine phosphatase
Probab=94.40 E-value=0.37 Score=43.76 Aligned_cols=129 Identities=19% Similarity=0.211 Sum_probs=78.8
Q ss_pred HHHhhcCcEEEEEccCceecCC--------------------------------------------------------ee
Q 016293 77 DELIDSVETFIFDCDGVIWKGD--------------------------------------------------------KL 100 (392)
Q Consensus 77 ~~~~~~ik~vifDlDGTL~d~~--------------------------------------------------------~~ 100 (392)
.++...+|+|+||+||||+++. .+
T Consensus 6 ~~~~~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (224)
T PLN02954 6 LELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKRPPRL 85 (224)
T ss_pred HHHHccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHccCCC
Confidence 3456779999999999999743 25
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccce-eeec-ccccCCCCCCCCcchhhhhchH
Q 016293 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLS-IVCL-KFHRIPSPNSSEFSQEEIFASS 178 (392)
Q Consensus 101 ~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~-~i~~-~~~~~~~~~~~~~~~e~i~~~~ 178 (392)
+|++.+.|+.++++|++++|+|| .....+...++.+|+.... -|.. +... ++.......... ...-....
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~~l~~~gi~~~~---~~~~~~~~~~~g~~~g~~~~~~--~~~~~~K~ 157 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSG---GFRQMIAPVAAILGIPPEN---IFANQILFGDSGEYAGFDENEP--TSRSGGKA 157 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHhCCChhh---EEEeEEEEcCCCcEECccCCCc--ccCCccHH
Confidence 68999999999999999999994 5566777778889986210 0211 1111 110000000000 00000111
Q ss_pred HHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce
Q 016293 179 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 179 ~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
..+..++++++. +.+++++++..++...+..|...
T Consensus 158 ~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~ 192 (224)
T PLN02954 158 EAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADL 192 (224)
T ss_pred HHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCE
Confidence 233355555554 47899999988888876666554
No 242
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.25 E-value=0.23 Score=49.83 Aligned_cols=108 Identities=15% Similarity=0.225 Sum_probs=63.8
Q ss_pred cCcEEEEEccCceecCC---------ee--------CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 82 SVETFIFDCDGVIWKGD---------KL--------IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~---------~~--------~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
..|++++|+|+|||-+- ++ +-.-.+.|..|+++|+.+++||-| ..+.+.+.++.-.-.+-
T Consensus 221 ~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN---~~~da~evF~khp~MiL 297 (574)
T COG3882 221 SKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKN---TEKDAKEVFRKHPDMIL 297 (574)
T ss_pred ccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCC---chhhHHHHHhhCCCeEe
Confidence 47899999999999721 22 223467889999999999999954 45555555543221110
Q ss_pred ccccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHH
Q 016293 145 EVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELEL 210 (392)
Q Consensus 145 ~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~ 210 (392)
.++.|..+-+ ++ .+..+.....++++++..+.-+++.+...-.+..+.
T Consensus 298 -keedfa~~~i-------NW----------~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~ 345 (574)
T COG3882 298 -KEEDFAVFQI-------NW----------DPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKR 345 (574)
T ss_pred -eHhhhhhhee-------cC----------CcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHh
Confidence 0011211111 11 122244457888888877777777666544444444
No 243
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=94.14 E-value=0.52 Score=44.06 Aligned_cols=111 Identities=16% Similarity=0.302 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeecccccc--ceeeecccccCCCCCCCCcchhhhh-----
Q 016293 103 GVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSF--LSIVCLKFHRIPSPNSSEFSQEEIF----- 175 (392)
Q Consensus 103 ~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f--~~~i~~~~~~~~~~~~~~~~~e~i~----- 175 (392)
...+.|+.++++|+++.-+|.++........+.|..+|++.. +.+| ++.+.........+... +-.++|+
T Consensus 85 ~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs--~~~~~~~~~~~~~~~~~~~~~~~-~~~~GIlft~~~ 161 (252)
T PF11019_consen 85 DVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFS--SSSFPEDGIISFPVFDSALSRAP-SFYDGILFTGGQ 161 (252)
T ss_pred hHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCcc--ccccccCcceecccccCCCCCCc-eeecCeEEeCCC
Confidence 567789999999999999996655555667778888998754 1110 00000000000001111 1123333
Q ss_pred chHHHHHHHHHhcCCCCCCEEEEEeCcchH----HHHHHcCCcee
Q 016293 176 ASSFAAAAYLKSIDFPKDKKVYVVGEDGIL----KELELAGFQYL 216 (392)
Q Consensus 176 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~----~~l~~~g~~~~ 216 (392)
+-+.....++...+..+++-+++.+..+-+ .++...|+.+.
T Consensus 162 ~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~ 206 (252)
T PF11019_consen 162 DKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFI 206 (252)
T ss_pred ccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEE
Confidence 334667788999998888888888876543 45556676664
No 244
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=94.11 E-value=0.17 Score=44.89 Aligned_cols=104 Identities=24% Similarity=0.303 Sum_probs=65.8
Q ss_pred cEEEEEccCceec-CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCC
Q 016293 84 ETFIFDCDGVIWK-GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIP 162 (392)
Q Consensus 84 k~vifDlDGTL~d-~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~ 162 (392)
-+++||+||||.- .....|+..+.|+.||+. +.+.++-+ ..+.+..+++|-++- +.|+|+...||-...
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-v~ig~Vgg------sDl~k~~eqlG~~Vl---~~fDY~F~ENGl~~y 81 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-VTIGFVGG------SDLSKQQEQLGDNVL---EEFDYVFSENGLVAY 81 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHHHhhh-eEEEEeec------HHHHHHHHHhchhHH---hhhcccccCCCeeEe
Confidence 3899999999987 455677899999998775 56666652 356666777787643 348888888887766
Q ss_pred CCCCCCcchhhhhc---------hHHHHHHHHHhcCCCCCCEEEE
Q 016293 163 SPNSSEFSQEEIFA---------SSFAAAAYLKSIDFPKDKKVYV 198 (392)
Q Consensus 163 ~~~~~~~~~e~i~~---------~~~~~~~~l~~~~~~~~~~~~v 198 (392)
+... .+..+.+.. ..+.+-.|+..++++..+..++
T Consensus 82 k~gk-~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFi 125 (252)
T KOG3189|consen 82 KGGK-LLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFI 125 (252)
T ss_pred eCCc-chhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceE
Confidence 6322 222333321 1123345666666665444444
No 245
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=94.09 E-value=0.23 Score=44.38 Aligned_cols=95 Identities=15% Similarity=0.085 Sum_probs=59.1
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeeccccc--CC--CCCCCCcchhhhh
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHR--IP--SPNSSEFSQEEIF 175 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~--~~--~~~~~~~~~e~i~ 175 (392)
++|++.+.|+.|+++ ++++++|| .....+...++.+|+... |...++..+.. .. .+.| +..
T Consensus 69 ~~pg~~e~L~~L~~~-~~~~IvS~---~~~~~~~~~l~~~gl~~~-----f~~~~~~~~~~~i~~~~~~~p-----~~k- 133 (205)
T PRK13582 69 PLPGAVEFLDWLRER-FQVVILSD---TFYEFAGPLMRQLGWPTL-----FCHSLEVDEDGMITGYDLRQP-----DGK- 133 (205)
T ss_pred CCCCHHHHHHHHHhc-CCEEEEeC---CcHHHHHHHHHHcCCchh-----hcceEEECCCCeEECcccccc-----chH-
Confidence 468999999999999 99999994 556667777888998644 33222221111 00 1111 111
Q ss_pred chHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce
Q 016293 176 ASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 176 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
...+++.+..+..+++++++..++...+.+|..+
T Consensus 134 ------~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 134 ------RQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred ------HHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCE
Confidence 1222222233457899999998888888877644
No 246
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=94.05 E-value=0.31 Score=52.94 Aligned_cols=43 Identities=23% Similarity=0.174 Sum_probs=38.3
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
.+.+-|++.++|+.+++.|+++.++| |..........+++|+.
T Consensus 440 ~Dp~R~~a~~aI~~l~~aGI~v~miT---GD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 440 FDPPRHDTKETIERARHLGVEVKMVT---GDHLAIAKETARRLGLG 482 (755)
T ss_pred cCCChhhHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCC
Confidence 66778899999999999999999999 78888888888888884
No 247
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=93.95 E-value=0.72 Score=49.21 Aligned_cols=56 Identities=21% Similarity=0.221 Sum_probs=40.7
Q ss_pred CcEEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 83 VETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 83 ik~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
.+.++.-.|++++- .+.+-|++++++++|++.|++++++| |-.......+.+++|+
T Consensus 421 ~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiT---GDn~~TA~aIA~elGI 480 (673)
T PRK14010 421 GTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCT---GDNELTAATIAKEAGV 480 (673)
T ss_pred CeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCC
Confidence 44444434656543 66778899999999999999999999 6666666555565555
No 248
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=93.92 E-value=1.1 Score=47.92 Aligned_cols=57 Identities=18% Similarity=0.223 Sum_probs=42.9
Q ss_pred cCcEEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 82 ~ik~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
..+.+++-.|++++- .+.+-|++.+++++|++.|++++++| |-.......+-+++|+
T Consensus 424 G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiT---GDn~~TA~aIA~elGI 484 (679)
T PRK01122 424 GGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMIT---GDNPLTAAAIAAEAGV 484 (679)
T ss_pred CCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCC
Confidence 356677767777643 66778899999999999999999999 6666655555555555
No 249
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=93.17 E-value=0.48 Score=41.37 Aligned_cols=88 Identities=14% Similarity=0.230 Sum_probs=52.6
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhh-HhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHHHHH
Q 016293 104 VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAA 182 (392)
Q Consensus 104 ~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l-~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~ 182 (392)
+++.|+.-+.+|-.++++|+++.-....+.+.| +.+.+.. .+.++-. |++. +|. ..-. .
T Consensus 119 A~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~------m~pv~f~-Gdk~-k~~------qy~K------t 178 (237)
T COG3700 119 ARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITN------MNPVIFA-GDKP-KPG------QYTK------T 178 (237)
T ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCC------Ccceeec-cCCC-Ccc------cccc------c
Confidence 667888888999999999943333334455555 3456643 2333333 3332 221 1111 1
Q ss_pred HHHHhcCCCCCCEEEEEeCcchHHHHHHcCCce
Q 016293 183 AYLKSIDFPKDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 183 ~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
.++++.+ ..++.+++++++.+.+++|.+-
T Consensus 179 ~~i~~~~----~~IhYGDSD~Di~AAkeaG~Rg 207 (237)
T COG3700 179 QWIQDKN----IRIHYGDSDNDITAAKEAGARG 207 (237)
T ss_pred HHHHhcC----ceEEecCCchhhhHHHhcCccc
Confidence 3444433 4588889999999999988765
No 250
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=93.14 E-value=0.33 Score=54.78 Aligned_cols=43 Identities=30% Similarity=0.379 Sum_probs=36.2
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
...+-+++.++|+.|++.|+++.++| |-............|+-
T Consensus 629 eD~lq~~v~etI~~L~~AGIkv~mlT---GD~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQAGIKIWVLT---GDKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhhhccHHHHHHHHHCCCeEEEEc---CCcHHHHHHHHHHhCCC
Confidence 44567889999999999999999999 77777777777777774
No 251
>PLN03190 aminophospholipid translocase; Provisional
Probab=93.00 E-value=1.3 Score=50.40 Aligned_cols=43 Identities=28% Similarity=0.336 Sum_probs=36.2
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
...+-+++.++|+.|++.|+++.++| |-.......+....|+-
T Consensus 724 ~D~lr~~v~~~I~~l~~agi~v~mlT---GD~~~tAi~IA~s~~Ll 766 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRTAGIKVWVLT---GDKQETAISIGYSSKLL 766 (1178)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHhCCC
Confidence 45677899999999999999999999 77777777777777774
No 252
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=92.63 E-value=0.94 Score=40.88 Aligned_cols=100 Identities=14% Similarity=0.051 Sum_probs=60.8
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccc-eeeecc-cccCCCCCCCCcchhhhhc
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFL-SIVCLK-FHRIPSPNSSEFSQEEIFA 176 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~-~~i~~~-~~~~~~~~~~~~~~e~i~~ 176 (392)
.+.|++.+.|+.+++++ +++|+|+ .....+...++.+|++.. |. -....+ +..........--...++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~---~~~~~~~~il~~lgi~~~-----~an~l~~~~~g~~tG~~~~~~~~K~~~l- 137 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSD---TFYEFSQPLMRQLGFPTL-----LCHKLEIDDSDRVVGYQLRQKDPKRQSV- 137 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeC---ChHHHHHHHHHHcCCchh-----hceeeEEecCCeeECeeecCcchHHHHH-
Confidence 46889999999999985 9999994 455566677789998744 32 122212 211111000000011111
Q ss_pred hHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 177 SSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 177 ~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
..+++.+ ..+++++++..++..++.+|..+.-
T Consensus 138 ------~~l~~~~---~~~v~vGDs~nDl~ml~~Ag~~ia~ 169 (203)
T TIGR02137 138 ------IAFKSLY---YRVIAAGDSYNDTTMLSEAHAGILF 169 (203)
T ss_pred ------HHHHhhC---CCEEEEeCCHHHHHHHHhCCCCEEe
Confidence 2233333 2688999999999999999987753
No 253
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.34 E-value=0.38 Score=44.55 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEecCCcccccc-ccccccCCCc-cceeeecccCCCccccCCCcHHHHHHHHHHcCCCCC
Q 016293 252 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLT-DAQEWAGGGS-MVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS 329 (392)
Q Consensus 252 ~~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~ 329 (392)
.|+...+.+..+++.....+++||........ ......+... .++.+.++.... ...+..+++++|++++
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~--------~~~l~~~~~~~~~~~~ 96 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA--------VQMILESKKRFDIRNG 96 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH--------HHHHHhhhhhccCCCc
Confidence 47788888999987666678899976532110 1112223322 233333321111 1356667788899999
Q ss_pred cEEEEcCCchhhHHHHHHcCC
Q 016293 330 QICMVGDRLDTDILFGQNGGC 350 (392)
Q Consensus 330 evi~IGD~l~nDI~ma~~aG~ 350 (392)
+|++|||+ ..|++.....|.
T Consensus 97 ~~~~vGd~-~~d~~~~~~~~~ 116 (242)
T TIGR01459 97 IIYLLGHL-ENDIINLMQCYT 116 (242)
T ss_pred eEEEeCCc-ccchhhhcCCCc
Confidence 99999999 689987765553
No 254
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=92.33 E-value=0.15 Score=48.39 Aligned_cols=110 Identities=14% Similarity=0.089 Sum_probs=67.8
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeec---cc
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCL---KF 158 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~---~~ 158 (392)
..++|+...|.++ .++++.++++.|+++|+ ++++||.....+. ...+...|+... |..+.+. ..
T Consensus 131 ~~~~Vvv~~d~~~-----~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~--~~~~~~~~~g~~-----~~~i~~~~g~~~ 197 (279)
T TIGR01452 131 NVGAVVVGYDEHF-----SYAKLREACAHLREPGC-LFVATNRDPWHPL--SDGSRTPGTGSL-----VAAIETASGRQP 197 (279)
T ss_pred CCCEEEEecCCCC-----CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCC--cCCCcccChHHH-----HHHHHHHhCCce
Confidence 4677777766543 37789999999999997 7889985432210 111112222211 2333322 22
Q ss_pred ccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeC-cchHHHHHHcCCcee
Q 016293 159 HRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGE-DGILKELELAGFQYL 216 (392)
Q Consensus 159 ~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~-~~~~~~l~~~g~~~~ 216 (392)
....||+| +.+ ...++++++.++++++++++ ..++...++.|++.+
T Consensus 198 ~~~gKP~p-----~~~-------~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si 244 (279)
T TIGR01452 198 LVVGKPSP-----YMF-------ECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 244 (279)
T ss_pred eccCCCCH-----HHH-------HHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEE
Confidence 23457765 222 25666778888888999888 478888999998764
No 255
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.28 E-value=0.59 Score=51.88 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=37.8
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
...+-++++++|+.++++|+++..+| |-.......+.+++|+...
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiT---GD~~~TA~aIa~~~Gi~~~ 589 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMIT---GDHVETAIAIAKECGIEAE 589 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEC---CCCHHHHHHHHHHcCCCCC
Confidence 34566789999999999999999999 7788888888888887543
No 256
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=92.17 E-value=0.15 Score=49.73 Aligned_cols=64 Identities=25% Similarity=0.427 Sum_probs=48.9
Q ss_pred hcCcEEEEEccCceecCC-------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHH---------HHHhhHh
Q 016293 81 DSVETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQ---------YGKKFET 138 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~-------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~---------~~~~l~~ 138 (392)
..-|.+.||+||||++++ -+++....-++.+.+.|+.++|.||..+-.... +..+...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~an 152 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVAN 152 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHh
Confidence 357799999999999844 257788899999999999999999976644322 3444556
Q ss_pred CCceee
Q 016293 139 LGLTVT 144 (392)
Q Consensus 139 lgl~~~ 144 (392)
+++++.
T Consensus 153 l~vPi~ 158 (422)
T KOG2134|consen 153 LGVPIQ 158 (422)
T ss_pred cCCceE
Confidence 777765
No 257
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=91.93 E-value=0.5 Score=42.39 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=44.6
Q ss_pred cCcEEEEEccCceecCC--------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 82 SVETFIFDCDGVIWKGD--------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~--------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
..|++++|||+||++.. -.-|...++|+.+.+ .+.++|-| ..+..-+...++.+|+.
T Consensus 20 ~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwT---Aa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 20 GKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWS---ATSMKWIEIKMTELGVL 84 (195)
T ss_pred CCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEe---cCCHHHHHHHHHHhccc
Confidence 46899999999999853 235789999999999 69999999 44556666667777653
No 258
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=91.41 E-value=1.1 Score=39.41 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=30.0
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCC
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLG 140 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lg 140 (392)
+-|+-++.++..++++++++++| +-....+...|+.++
T Consensus 74 Idp~fKef~e~ike~di~fiVvS---sGm~~fI~~lfe~iv 111 (220)
T COG4359 74 IDPGFKEFVEWIKEHDIPFIVVS---SGMDPFIYPLFEGIV 111 (220)
T ss_pred cCccHHHHHHHHHHcCCCEEEEe---CCCchHHHHHHHhhc
Confidence 45789999999999999999999 444556666777654
No 259
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=91.33 E-value=0.066 Score=46.53 Aligned_cols=93 Identities=12% Similarity=-0.042 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 016293 254 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 333 (392)
Q Consensus 254 ~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi~ 333 (392)
+.+.+.+..+.+. ...+|.|+....+.......+.-...++..+.+ .+.....+|+ +...++.+|.++++|++
T Consensus 45 Pgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~---r~~~~~~~~~---~~K~L~~l~~~~~~vIi 117 (162)
T TIGR02251 45 PHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLY---RESCVFTNGK---YVKDLSLVGKDLSKVII 117 (162)
T ss_pred CCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEE---ccccEEeCCC---EEeEchhcCCChhhEEE
Confidence 3456666666653 446777777765432211111111112222222 2222223444 55668889999999999
Q ss_pred EcCCchhhHHHHHHcCCeEEE
Q 016293 334 VGDRLDTDILFGQNGGCKTLL 354 (392)
Q Consensus 334 IGD~l~nDI~ma~~aG~~~i~ 354 (392)
|||+ ..|+.++..+|+....
T Consensus 118 VDD~-~~~~~~~~~NgI~i~~ 137 (162)
T TIGR02251 118 IDNS-PYSYSLQPDNAIPIKS 137 (162)
T ss_pred EeCC-hhhhccCccCEeecCC
Confidence 9999 5999999999965444
No 260
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=91.22 E-value=0.36 Score=48.94 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=33.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc-CCeEEEEecC
Q 016293 317 MDYLANKFGIQKSQICMVGDRLDTDILFGQNG-GCKTLLVLSG 358 (392)
Q Consensus 317 ~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~a-G~~~i~V~~G 358 (392)
...+.+.+|..-.+|++|||++..||.-.+.. |++|++|-.-
T Consensus 284 ~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 284 WDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred HHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 56788889999899999999999999987766 9999999653
No 261
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=91.00 E-value=1.7 Score=46.71 Aligned_cols=59 Identities=24% Similarity=0.343 Sum_probs=42.9
Q ss_pred CcEEEEEccCceecCC------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 83 VETFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 83 ik~vifDlDGTL~d~~------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
-+.+.||+|-.=.... .+...+.+|+.+.|..|++++.+| |+.+........+.|+...
T Consensus 562 p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVT---gdhpiTAkAiA~~vgIi~~ 632 (1019)
T KOG0203|consen 562 PRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT---GDHPITAKAIAKSVGIISE 632 (1019)
T ss_pred CCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEe---cCccchhhhhhhheeeecC
Confidence 3467788875333222 123357899999999999999999 8888888777788886543
No 262
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=90.62 E-value=1.9 Score=46.35 Aligned_cols=44 Identities=16% Similarity=0.328 Sum_probs=37.0
Q ss_pred CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 98 ~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
..+-+++.++++.+++.|+++..+| |-.......+.+.+|+...
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mIT---GD~~~TA~AI~r~iGi~~~ 626 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMIT---GDNKETAEAIAREIGIFSE 626 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHhCCCcC
Confidence 3456789999999999999999999 7777887788888887644
No 263
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=90.30 E-value=0.52 Score=44.42 Aligned_cols=82 Identities=10% Similarity=-0.029 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccc--cccCCCc-cceeeecccCCCccccCCCcHHHHHHHHHHcCCCCC
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQ--EWAGGGS-MVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS 329 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~--~~~~~~~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~ 329 (392)
++...+.+..+...+...+++||.+......... ...|... ..+.+. ..+ ..++|+..++.+.+.+++
T Consensus 120 ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~ll---lr~---~~~~K~~rr~~I~~~y~I--- 190 (266)
T TIGR01533 120 VAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLL---LKK---DKSSKESRRQKVQKDYEI--- 190 (266)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEE---eCC---CCCCcHHHHHHHHhcCCE---
Confidence 4556677777776666788899987432211111 1122221 111111 111 146778888888887777
Q ss_pred cEEEEcCCchhhHHHH
Q 016293 330 QICMVGDRLDTDILFG 345 (392)
Q Consensus 330 evi~IGD~l~nDI~ma 345 (392)
+++|||+ .+|+..+
T Consensus 191 -vl~vGD~-~~Df~~~ 204 (266)
T TIGR01533 191 -VLLFGDN-LLDFDDF 204 (266)
T ss_pred -EEEECCC-HHHhhhh
Confidence 8999999 5999653
No 264
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=90.22 E-value=0.37 Score=49.94 Aligned_cols=41 Identities=27% Similarity=0.473 Sum_probs=34.1
Q ss_pred CcEEEEEccCceecCCee------------CCCHHHHHHHHHHCCCcEEEEeC
Q 016293 83 VETFIFDCDGVIWKGDKL------------IDGVPETLDMLRSKGKRLVFVTN 123 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~------------~~~~~eal~~l~~~Gi~~~i~Tn 123 (392)
-|.|+.|+|||++.+..+ ..++.+...+..++|++++++|-
T Consensus 530 ~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSA 582 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSA 582 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEeh
Confidence 468999999999985432 34788899999999999999993
No 265
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=90.17 E-value=0.36 Score=45.26 Aligned_cols=111 Identities=9% Similarity=0.083 Sum_probs=68.5
Q ss_pred CcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccC-
Q 016293 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRI- 161 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~- 161 (392)
.++|+...|.. .-.++...++++.|++.+++++++||....... ..+..+|+... |..+.+..+...
T Consensus 108 ~~~Vv~g~~~~----~~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~---~~~~~~g~g~~-----~~~i~~~~~~~~~ 175 (257)
T TIGR01458 108 PNCVVMGLAPE----HFSYQILNQAFRLLLDGAKPLLIAIGKGRYYKR---KDGLALDVGPF-----VTALEYATDTKAT 175 (257)
T ss_pred CCEEEEecccC----ccCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcC---CCCCCCCchHH-----HHHHHHHhCCCce
Confidence 34666665431 112567888999999999999999986543322 22233343322 333333333222
Q ss_pred --CCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCc-chHHHHHHcCCceec
Q 016293 162 --PSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGED-GILKELELAGFQYLG 217 (392)
Q Consensus 162 --~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~-~~~~~l~~~g~~~~~ 217 (392)
.||+| + ++ ...+++++..++++++++++. .++...+..|++.+.
T Consensus 176 ~~gKP~p-----~-~~------~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~ 222 (257)
T TIGR01458 176 VVGKPSK-----T-FF------LEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQ 222 (257)
T ss_pred eecCCCH-----H-HH------HHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEE
Confidence 46654 2 22 356667788888888998885 788899999998753
No 266
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.08 E-value=1.4 Score=40.02 Aligned_cols=97 Identities=13% Similarity=0.128 Sum_probs=68.4
Q ss_pred CHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHHHHH
Q 016293 103 GVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAA 182 (392)
Q Consensus 103 ~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~ 182 (392)
-.++.|-.|++++ ..+.||. ...-..+.|+.||+... |.+|+|+..-...+ +.+ -...+..+..
T Consensus 104 ~LRnlLL~l~~r~--k~~FTNa---~k~HA~r~Lk~LGieDc-----Fegii~~e~~np~~---~~~---vcKP~~~afE 167 (244)
T KOG3109|consen 104 VLRNLLLSLKKRR--KWIFTNA---YKVHAIRILKKLGIEDC-----FEGIICFETLNPIE---KTV---VCKPSEEAFE 167 (244)
T ss_pred HHHHHHHhCcccc--EEEecCC---cHHHHHHHHHHhChHHh-----ccceeEeeccCCCC---Cce---eecCCHHHHH
Confidence 4677887777765 6777873 45667788999999988 99999985544321 000 0123335555
Q ss_pred HHHHhcCCC-CCCEEEEEeCcchHHHHHHcCCce
Q 016293 183 AYLKSIDFP-KDKKVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 183 ~~l~~~~~~-~~~~~~v~~~~~~~~~l~~~g~~~ 215 (392)
..++..++. +.+++++.++..=++..++.|+..
T Consensus 168 ~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~t 201 (244)
T KOG3109|consen 168 KAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKT 201 (244)
T ss_pred HHHHHhCCCCcCceEEEcCchhhHHHHHhcccee
Confidence 777778888 778888888877788888889875
No 267
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=89.91 E-value=13 Score=40.54 Aligned_cols=57 Identities=18% Similarity=0.193 Sum_probs=36.2
Q ss_pred HHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEE--CChhhHHHh
Q 016293 321 ANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSL 387 (392)
Q Consensus 321 ~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~--~sl~el~~~ 387 (392)
.+++.-....+.||||.+ ||-.++..|. |+|.-|.+..-..+ -+|.++ ++|.++...
T Consensus 778 Ik~lq~~~~~VaMVGDGI-NDaPALA~Ad---VGIaig~gs~vAie------aADIVLmrn~L~~v~~a 836 (951)
T KOG0207|consen 778 IKEIQKNGGPVAMVGDGI-NDAPALAQAD---VGIAIGAGSDVAIE------AADIVLMRNDLRDVPFA 836 (951)
T ss_pred HHHHHhcCCcEEEEeCCC-CccHHHHhhc---cceeeccccHHHHh------hCCEEEEccchhhhHHH
Confidence 334433447899999995 9999998887 55555555444443 256554 566666543
No 268
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=89.61 E-value=16 Score=33.41 Aligned_cols=42 Identities=26% Similarity=0.301 Sum_probs=31.3
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeE-EEEe
Q 016293 313 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVL 356 (392)
Q Consensus 313 ~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~-i~V~ 356 (392)
+...++.+++.-+++-+ +++|||++ +|++|.+.+.-+. +.|.
T Consensus 192 ka~i~e~~~ele~~d~s-a~~VGDSI-tDv~ml~~~rgrGglAva 234 (315)
T COG4030 192 KAKIMEGYCELEGIDFS-AVVVGDSI-TDVKMLEAARGRGGLAVA 234 (315)
T ss_pred hhHHHHHHHhhcCCCcc-eeEecCcc-cchHHHHHhhccCceEEE
Confidence 45567777777776655 89999995 9999999875443 5554
No 269
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=88.93 E-value=1.8 Score=37.91 Aligned_cols=44 Identities=23% Similarity=0.300 Sum_probs=33.0
Q ss_pred CCcHHHHH--HHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCC
Q 016293 311 KPSTFMMD--YLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV 359 (392)
Q Consensus 311 KP~p~~~~--~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~ 359 (392)
||+|.-+. +.++..++ -|+-||+ ++||.+|+.+|.+.|-+.+.-
T Consensus 169 k~k~~qy~Kt~~i~~~~~----~IhYGDS-D~Di~AAkeaG~RgIRilRAa 214 (237)
T COG3700 169 KPKPGQYTKTQWIQDKNI----RIHYGDS-DNDITAAKEAGARGIRILRAA 214 (237)
T ss_pred CCCcccccccHHHHhcCc----eEEecCC-chhhhHHHhcCccceeEEecC
Confidence 55554443 45555444 4889999 999999999999999997743
No 270
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=88.81 E-value=1.1 Score=43.97 Aligned_cols=55 Identities=20% Similarity=0.328 Sum_probs=40.6
Q ss_pred cCcEEEEEccCceec-CCeeCC--CHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhh
Q 016293 82 SVETFIFDCDGVIWK-GDKLID--GVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF 136 (392)
Q Consensus 82 ~ik~vifDlDGTL~d-~~~~~~--~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l 136 (392)
..++|-||=|+||++ +..+.+ .++.-|-.|-++|+.+.|+|-.+--....+.+.|
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL 203 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERL 203 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHH
Confidence 789999999999997 445533 4778888899999999999954433334444444
No 271
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=88.16 E-value=1.6 Score=45.94 Aligned_cols=51 Identities=20% Similarity=0.332 Sum_probs=36.0
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhH
Q 016293 329 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 388 (392)
Q Consensus 329 ~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~ 388 (392)
.++++|||+ .||+.|.+.|.+ .|+|-..+++...+ -+||.+.-+.++-+++
T Consensus 782 krvc~IGDG-GNDVsMIq~A~~-GiGI~gkEGkQASL-------AADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 782 KRVCAIGDG-GNDVSMIQAADV-GIGIVGKEGKQASL-------AADFSITQFSHVSRLL 832 (1051)
T ss_pred ceEEEEcCC-Cccchheeeccc-ceeeecccccccch-------hccccHHHHHHHHHHh
Confidence 699999999 799999998873 35554444443333 4799888887765543
No 272
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=87.61 E-value=1.8 Score=35.65 Aligned_cols=59 Identities=17% Similarity=0.098 Sum_probs=45.1
Q ss_pred cEEEEEccCceecCC----------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 84 ETFIFDCDGVIWKGD----------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 84 k~vifDlDGTL~d~~----------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
+.|-+|+|++++-.+ ..++++..-|..|+++|+.++++|+ +..+.-....|+.+.+...
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASR--t~ap~iA~q~L~~fkvk~~ 87 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASR--TMAPQIASQGLETFKVKQT 87 (144)
T ss_pred EEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecC--CCCHHHHHHHHHHhccCcc
Confidence 467777777776421 3588999999999999999999997 5566777777787777543
No 273
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=85.47 E-value=3.5 Score=35.22 Aligned_cols=63 Identities=16% Similarity=0.295 Sum_probs=48.7
Q ss_pred cCcEEEEEccCceec--CCeeCCCHHHHHHHHHHC-C-CcEEEEeCCCCC----CHHHHHHhhH-hCCceee
Q 016293 82 SVETFIFDCDGVIWK--GDKLIDGVPETLDMLRSK-G-KRLVFVTNNSTK----SRKQYGKKFE-TLGLTVT 144 (392)
Q Consensus 82 ~ik~vifDlDGTL~d--~~~~~~~~~eal~~l~~~-G-i~~~i~Tn~~gr----~~~~~~~~l~-~lgl~~~ 144 (392)
.||+|+||-|.++.- +..++|.-..-+++++.. | .-+.+.||..|- +..+.++.|+ ..|+++-
T Consensus 42 ~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVl 113 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVL 113 (190)
T ss_pred CceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCceE
Confidence 799999999999974 677888888888888774 4 788899998876 2345566664 5888754
No 274
>PRK11590 hypothetical protein; Provisional
Probab=85.46 E-value=6.4 Score=35.44 Aligned_cols=107 Identities=10% Similarity=-0.004 Sum_probs=56.9
Q ss_pred eeCCCHHHHH-HHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhch
Q 016293 99 KLIDGVPETL-DMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFAS 177 (392)
Q Consensus 99 ~~~~~~~eal-~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~ 177 (392)
.++|++.+.| +.++++|++++|+|| .+..-+...++.+|+..- ..+||..-.... ...+........
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSa---s~~~~~~~il~~l~~~~~------~~~i~t~l~~~~---tg~~~g~~c~g~ 162 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITG---SPQPLVEQVYFDTPWLPR------VNLIASQMQRRY---GGWVLTLRCLGH 162 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHcccccc------CceEEEEEEEEE---ccEECCccCCCh
Confidence 4589999999 578889999999995 455556666677774110 113333211100 000001111111
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceecC
Q 016293 178 SFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGG 218 (392)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~ 218 (392)
..+...-+.++..........++..++..+..++.++...
T Consensus 163 -~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 163 -EKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred -HHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 1111222222323334445566778888888888877544
No 275
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=83.90 E-value=1.3 Score=38.79 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=25.9
Q ss_pred cHHHHHHH---HHHcCCCCCcEEEEcCCchhhHHHHH
Q 016293 313 STFMMDYL---ANKFGIQKSQICMVGDRLDTDILFGQ 346 (392)
Q Consensus 313 ~p~~~~~~---~~~lgv~~~evi~IGD~l~nDI~ma~ 346 (392)
|...++.+ ... +++.+++++|||+ .+|+.|+|
T Consensus 158 K~~~l~~~~~~~~~-~~~~~~~~~iGDs-~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEE-DIDPDRVIAIGDS-INDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHH-THTCCEEEEEESS-GGGHHHHH
T ss_pred HHHHHHHHHHHhhc-CCCCCeEEEEECC-HHHHHHhC
Confidence 56666666 444 8889999999999 59999986
No 276
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=83.23 E-value=6.3 Score=42.90 Aligned_cols=60 Identities=13% Similarity=0.200 Sum_probs=52.7
Q ss_pred hcCcEEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 81 DSVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
...-.+++-+||+|.- ...+-|++..++..|++.|++++++| |-.........+++|++.
T Consensus 701 ~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLT---GDn~~aA~svA~~VGi~~ 764 (951)
T KOG0207|consen 701 KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLT---GDNDAAARSVAQQVGIDN 764 (951)
T ss_pred cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEc---CCCHHHHHHHHHhhCcce
Confidence 4577999999999975 77788899999999999999999999 778888888889999763
No 277
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=82.25 E-value=5.3 Score=33.49 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=40.0
Q ss_pred CcEEEEEccCceecCCee-CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhh-HhCCcee
Q 016293 83 VETFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTV 143 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~-~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l-~~lgl~~ 143 (392)
.-.-++|+||.+++-..- --...+.|+.+.+.|.+++++|.-+ ++.++.+.+ ..++-..
T Consensus 43 tgiAildL~G~~l~l~S~R~~~~~evi~~I~~~G~PviVAtDV~--p~P~~V~Kia~~f~A~l 103 (138)
T PF04312_consen 43 TGIAILDLDGELLDLKSSRNMSRSEVIEWISEYGKPVIVATDVS--PPPETVKKIARSFNAVL 103 (138)
T ss_pred eEEEEEecCCcEEEEEeecCCCHHHHHHHHHHcCCEEEEEecCC--CCcHHHHHHHHHhCCcc
Confidence 346789999999872222 2246788899999999999999642 344444444 5566443
No 278
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=80.94 E-value=2 Score=42.75 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=32.8
Q ss_pred cCcEEEEEccCceecCCee------------CCCHHHHHHHHHHCCCcEEEEeC
Q 016293 82 SVETFIFDCDGVIWKGDKL------------IDGVPETLDMLRSKGKRLVFVTN 123 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~------------~~~~~eal~~l~~~Gi~~~i~Tn 123 (392)
..+.|++||||||+.+..+ .-++....-..-.+|+++...|.
T Consensus 374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~Ylts 427 (580)
T COG5083 374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTS 427 (580)
T ss_pred CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEec
Confidence 5789999999999875432 23567777777889999999993
No 279
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=78.83 E-value=5.2 Score=36.21 Aligned_cols=33 Identities=15% Similarity=-0.024 Sum_probs=25.7
Q ss_pred HHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeE
Q 016293 319 YLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT 352 (392)
Q Consensus 319 ~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~ 352 (392)
.+.+.+|.+.+.+.+-||+ .+|+.|.+.+|...
T Consensus 166 rl~~~~~~~~~~~~aYsDS-~~D~pmL~~a~~~~ 198 (210)
T TIGR01545 166 QLEQKIGSPLKLYSGYSDS-KQDNPLLAFCEHRW 198 (210)
T ss_pred HHHHHhCCChhheEEecCC-cccHHHHHhCCCcE
Confidence 3444456667789999999 59999999999543
No 280
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=77.69 E-value=2.6 Score=33.87 Aligned_cols=58 Identities=24% Similarity=0.381 Sum_probs=46.9
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
.++.|++||.++-.=+..-+....+..+.++.+|+++.++. ....+...|+.+|+...
T Consensus 47 ~~~~vIlD~s~v~~iDssgi~~L~~~~~~~~~~g~~~~l~~-----~~~~v~~~l~~~~~~~~ 104 (117)
T PF01740_consen 47 TIKNVILDMSGVSFIDSSGIQALVDIIKELRRRGVQLVLVG-----LNPDVRRILERSGLIDF 104 (117)
T ss_dssp SSSEEEEEETTESEESHHHHHHHHHHHHHHHHTTCEEEEES-----HHHHHHHHHHHTTGHHH
T ss_pred cceEEEEEEEeCCcCCHHHHHHHHHHHHHHHHCCCEEEEEE-----CCHHHHHHHHHcCCChh
Confidence 47899999999865445555566788899999999999988 67888888999998643
No 281
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=73.97 E-value=19 Score=32.99 Aligned_cols=102 Identities=13% Similarity=0.071 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
|+++..++.+.+. .++...+-|.+........--.-+.+.+...++.-.+. ..-.|-.-..|..+.+.+|.++.|++
T Consensus 125 ~aDv~~a~e~w~~-~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt--~iG~K~e~~sy~~I~~~Ig~s~~eiL 201 (254)
T KOG2630|consen 125 YADVLPAIERWSG-EGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT--TIGLKVESQSYKKIGHLIGKSPREIL 201 (254)
T ss_pred cchhHHHHHHHhh-cCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc--cccceehhHHHHHHHHHhCCChhheE
Confidence 5566666666664 35544444554433221111111222222222222111 11236667789999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 333 MVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
+.-|- ..-..+|+.+|+.+.++.+.
T Consensus 202 fLTd~-~~Ea~aa~~aGl~a~l~~rP 226 (254)
T KOG2630|consen 202 FLTDV-PREAAAARKAGLQAGLVSRP 226 (254)
T ss_pred EeccC-hHHHHHHHhcccceeeeecC
Confidence 99999 59999999999999988763
No 282
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=73.88 E-value=77 Score=29.52 Aligned_cols=59 Identities=15% Similarity=0.210 Sum_probs=39.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCC----chhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEEECChhhHHHhHH
Q 016293 317 MDYLANKFGIQKSQICMVGDR----LDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 389 (392)
Q Consensus 317 ~~~~~~~lgv~~~evi~IGD~----l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v~~sl~el~~~~~ 389 (392)
=..++++++++ +++-=|+ ...=+++|+..|+..|.|..... ..+..++.+++|+++++.
T Consensus 186 n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~-----------~~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 186 NRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPE-----------PYGDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC-----------CCCCcccCCHHHHHHHHh
Confidence 35667888873 4443333 12447889999999999887432 234555899999999986
No 283
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=73.85 E-value=7.1 Score=37.51 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=44.3
Q ss_pred EEEEEccCceecCC-------------------eeCCCHHHHHHHHHHCC-CcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 85 TFIFDCDGVIWKGD-------------------KLIDGVPETLDMLRSKG-KRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 85 ~vifDlDGTL~d~~-------------------~~~~~~~eal~~l~~~G-i~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
.++.|+|.|+..+. .++|++..+.+.|.+.| .+++.+||.+-.....+.+++..-+++
T Consensus 163 giISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P 240 (373)
T COG4850 163 GIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFP 240 (373)
T ss_pred eeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCC
Confidence 79999999997632 46899999999999998 999999986544445555555544443
No 284
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=73.78 E-value=6.5 Score=36.70 Aligned_cols=60 Identities=22% Similarity=0.359 Sum_probs=43.0
Q ss_pred EEEEEccCceecCCe---------------------------eCCCHHHHHHHHHHC------CCcEEEEeCCCCCCHHH
Q 016293 85 TFIFDCDGVIWKGDK---------------------------LIDGVPETLDMLRSK------GKRLVFVTNNSTKSRKQ 131 (392)
Q Consensus 85 ~vifDlDGTL~d~~~---------------------------~~~~~~eal~~l~~~------Gi~~~i~Tn~~gr~~~~ 131 (392)
-|+||-|++|.++.. ++..-.+.|.++|++ -+++.|+|-++......
T Consensus 123 RIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~R 202 (264)
T PF06189_consen 123 RIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHER 202 (264)
T ss_pred EEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHH
Confidence 379999999998431 111234466666665 37788999877777777
Q ss_pred HHHhhHhCCceee
Q 016293 132 YGKKFETLGLTVT 144 (392)
Q Consensus 132 ~~~~l~~lgl~~~ 144 (392)
+.+-|+..|+.+.
T Consensus 203 vI~TLr~Wgv~vD 215 (264)
T PF06189_consen 203 VIRTLRSWGVRVD 215 (264)
T ss_pred HHHHHHHcCCcHh
Confidence 8888889999765
No 285
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=71.70 E-value=22 Score=33.29 Aligned_cols=70 Identities=19% Similarity=0.290 Sum_probs=48.3
Q ss_pred CCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCC
Q 016293 115 GKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDK 194 (392)
Q Consensus 115 Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~ 194 (392)
-+.++++|.|+..+---+..-++..||++. -.+++.......|++.++..
T Consensus 36 ~VEVVllSRNspdTGlRv~nSI~hygL~It---------------------------R~~ft~G~~~~~Yl~af~v~--- 85 (264)
T PF06189_consen 36 LVEVVLLSRNSPDTGLRVFNSIRHYGLDIT---------------------------RAAFTGGESPYPYLKAFNVD--- 85 (264)
T ss_pred ceEEEEEecCCHHHHHHHHHhHHHhCCcce---------------------------eeeecCCCCHHHHHHHhCCc---
Confidence 467889997765555556667778888876 22333334444888888765
Q ss_pred EEEEEeCcchHHHHHHcCCce
Q 016293 195 KVYVVGEDGILKELELAGFQY 215 (392)
Q Consensus 195 ~~~v~~~~~~~~~l~~~g~~~ 215 (392)
+++.....+.+..-..|+.-
T Consensus 86 -LFLSan~~DV~~Ai~~G~~A 105 (264)
T PF06189_consen 86 -LFLSANEDDVQEAIDAGIPA 105 (264)
T ss_pred -eEeeCCHHHHHHHHHcCCCc
Confidence 77777778888888888753
No 286
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=69.65 E-value=7.1 Score=30.91 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=44.8
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
..+.+++|+-|+=+=+..-.....+..+.++.+|.++.++- ....+.+.|+..|+..
T Consensus 40 ~~~~vvlDls~v~~iDssg~~~l~~~~~~~~~~g~~l~l~g-----~~~~v~~~l~~~gl~~ 96 (109)
T cd07041 40 RARGVIIDLTGVPVIDSAVARHLLRLARALRLLGARTILTG-----IRPEVAQTLVELGIDL 96 (109)
T ss_pred CCCEEEEECCCCchhcHHHHHHHHHHHHHHHHcCCeEEEEe-----CCHHHHHHHHHhCCCh
Confidence 57899999999865444444556778889999999999987 5577888888888754
No 287
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=69.11 E-value=9.8 Score=29.05 Aligned_cols=56 Identities=21% Similarity=0.301 Sum_probs=43.5
Q ss_pred CcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
.+.+++|+.++=.=+.....-..+..+.++++|..+.++. ....+.+.++.+|+..
T Consensus 38 ~~~viid~~~v~~iDs~g~~~L~~l~~~~~~~g~~v~i~~-----~~~~~~~~l~~~gl~~ 93 (99)
T cd07043 38 PRRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRLVLVN-----VSPAVRRVLELTGLDR 93 (99)
T ss_pred CCEEEEECCCCCEEcchhHHHHHHHHHHHHHcCCeEEEEc-----CCHHHHHHHHHhCcce
Confidence 6899999999754444445556788889999999988876 4568888899888864
No 288
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=68.87 E-value=10 Score=29.80 Aligned_cols=58 Identities=12% Similarity=0.246 Sum_probs=45.0
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
..+.+++|+-|+=+=+..-.....+..+.++++|+++.++. ....+.+.|+..|+...
T Consensus 38 ~~~~vilDls~v~~iDssgi~~L~~~~~~~~~~g~~l~l~~-----~~~~v~~~l~~~gl~~~ 95 (106)
T TIGR02886 38 PIKHLILNLKNVTFMDSSGLGVILGRYKKIKNEGGEVIVCN-----VSPAVKRLFELSGLFKI 95 (106)
T ss_pred CCCEEEEECCCCcEecchHHHHHHHHHHHHHHcCCEEEEEe-----CCHHHHHHHHHhCCceE
Confidence 47899999999865444433445677888999999999988 66788888998888654
No 289
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=68.16 E-value=15 Score=28.73 Aligned_cols=57 Identities=14% Similarity=0.248 Sum_probs=44.0
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
..+.+++|+.++=.-+.....-..+..+.++++|.++.++. ....+...|+..|+..
T Consensus 42 ~~~~vvidls~v~~iDssgl~~L~~~~~~~~~~~~~~~l~~-----~~~~~~~~l~~~~l~~ 98 (108)
T TIGR00377 42 GPRPIVLDLEDLEFMDSSGLGVLLGRYKQVRRVGGQLVLVS-----VSPRVARLLDITGLLR 98 (108)
T ss_pred CCCeEEEECCCCeEEccccHHHHHHHHHHHHhcCCEEEEEe-----CCHHHHHHHHHhChhh
Confidence 68899999999754344444456778888899999988887 5677888888888864
No 290
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=66.28 E-value=10 Score=29.58 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=44.7
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
..+.+++|+-|+=+-+..-.....+..+.++++|.++.++. ....+.+.++..|+.
T Consensus 38 ~~~~vilDls~v~~iDssgl~~L~~l~~~~~~~g~~l~l~~-----~~~~v~~~l~~~gl~ 93 (100)
T cd06844 38 AGKTIVIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTG-----ISPAVRITLTESGLD 93 (100)
T ss_pred CCCEEEEECCCCcEEcHHHHHHHHHHHHHHHHcCCEEEEEC-----CCHHHHHHHHHhCch
Confidence 47899999999865555555556788899999999999987 567788888888875
No 291
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=66.23 E-value=15 Score=34.00 Aligned_cols=46 Identities=15% Similarity=0.218 Sum_probs=41.2
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCC
Q 016293 313 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV 359 (392)
Q Consensus 313 ~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~ 359 (392)
|..+|+.+.+++|-+.-.-++|||+ ..--++|+..+++.+-|....
T Consensus 215 K~~cFe~I~~Rfg~p~~~f~~IGDG-~eEe~aAk~l~wPFw~I~~h~ 260 (274)
T TIGR01658 215 KLQCFKWIKERFGHPKVRFCAIGDG-WEECTAAQAMNWPFVKIDLHP 260 (274)
T ss_pred hHHHHHHHHHHhCCCCceEEEeCCC-hhHHHHHHhcCCCeEEeecCC
Confidence 3788999999999988999999999 588899999999999988754
No 292
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.53 E-value=3.4 Score=41.40 Aligned_cols=47 Identities=21% Similarity=0.186 Sum_probs=44.1
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEE
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 355 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V 355 (392)
..|.++..|..+++.-++++...+.+||+...|+.+++..|+.|.+-
T Consensus 155 l~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 155 LKKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred hhcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 47899999999999999999999999999999999999999988875
No 293
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=64.15 E-value=53 Score=37.38 Aligned_cols=41 Identities=29% Similarity=0.309 Sum_probs=33.5
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
++=+++.+.|+.|++.|+++-+.| |-..+....+.-..++-
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLT---GDK~ETAiNIg~sC~Ll 691 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLT---GDKQETAINIGYSCRLL 691 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEc---CcHHHHHHHHHHhhcCC
Confidence 455689999999999999999999 77777777777666654
No 294
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=63.11 E-value=20 Score=31.69 Aligned_cols=107 Identities=19% Similarity=0.188 Sum_probs=63.2
Q ss_pred EccCceec--------CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhH---hCCceeeccccccceeeecc
Q 016293 89 DCDGVIWK--------GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFE---TLGLTVTEVKDSFLSIVCLK 157 (392)
Q Consensus 89 DlDGTL~d--------~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~---~lgl~~~~~~~~f~~~i~~~ 157 (392)
-+.|-+|. ...++|++.++|++-++.|+++.|-|+. +.+.-.-++. ...+... |.| +-
T Consensus 85 ~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSG---SV~AQkL~Fghs~agdL~~l-----fsG---yf 153 (229)
T COG4229 85 ALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSG---SVKAQKLFFGHSDAGDLNSL-----FSG---YF 153 (229)
T ss_pred HHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCC---CchhHHHhhcccccccHHhh-----hcc---ee
Confidence 34566664 2357999999999999999999999843 3333333332 2222222 111 11
Q ss_pred cccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 158 FHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 158 ~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
+..+.+.. | ....++..+..++++...+++.+...-+++.+..|+....
T Consensus 154 DttiG~Kr------E-----~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l 202 (229)
T COG4229 154 DTTIGKKR------E-----SQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGL 202 (229)
T ss_pred eccccccc------c-----chhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheee
Confidence 11111110 0 1122355666788877777877777788888888987643
No 295
>PLN02645 phosphoglycolate phosphatase
Probab=61.40 E-value=22 Score=34.23 Aligned_cols=89 Identities=13% Similarity=0.037 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCC--ccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCc
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGG--SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ 330 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~e 330 (392)
++...++++.++..+...+++||............+...| ...+.+. .........++..+....+
T Consensus 46 ~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~------------ts~~~~~~~l~~~~~~~~~ 113 (311)
T PLN02645 46 IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIF------------SSSFAAAAYLKSINFPKDK 113 (311)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEe------------ehHHHHHHHHHhhccCCCC
Confidence 4566788888887666677888877433222221122222 1111111 1122344556666665545
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEE
Q 016293 331 ICMVGDRLDTDILFGQNGGCKTLL 354 (392)
Q Consensus 331 vi~IGD~l~nDI~ma~~aG~~~i~ 354 (392)
.++++++ ..+.+.++.+|+.++.
T Consensus 114 ~V~viG~-~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 114 KVYVIGE-EGILEELELAGFQYLG 136 (311)
T ss_pred EEEEEcC-HHHHHHHHHCCCEEec
Confidence 5777777 5999999999998765
No 296
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=60.67 E-value=19 Score=35.01 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=30.5
Q ss_pred HHHHHcCCCCCcEEEEcCCchhhHHHHH-HcCCeEEEEec
Q 016293 319 YLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVLS 357 (392)
Q Consensus 319 ~~~~~lgv~~~evi~IGD~l~nDI~ma~-~aG~~~i~V~~ 357 (392)
..++.-|-.-.+|++|||.+..|+...- ..|++|-.|-.
T Consensus 337 ~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 337 SFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred HHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 4455556566799999999999998776 88998877654
No 297
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=58.00 E-value=1.6e+02 Score=27.47 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=42.7
Q ss_pred CcHHHHHHHHHHcCCCCCcEEEEcC--CchhhHHHHHHcCCeEEEEecC-CC--Chhhcc-------------CCCCCCC
Q 016293 312 PSTFMMDYLANKFGIQKSQICMVGD--RLDTDILFGQNGGCKTLLVLSG-VT--SLSMLQ-------------SPNNSIQ 373 (392)
Q Consensus 312 P~p~~~~~~~~~lgv~~~evi~IGD--~l~nDI~ma~~aG~~~i~V~~G-~~--~~~~l~-------------~~~~~~~ 373 (392)
|.++.+. .+..+|++++++++.== +.+.+..+.+..|++.+..... .. ..+.++ +| ...+
T Consensus 159 P~~~~l~-~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP-~~~~ 236 (256)
T TIGR00715 159 PYPQALA-QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARP-QTIP 236 (256)
T ss_pred CCchhhH-HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCC-CCCC
Confidence 4455455 45567777777655321 1134466666666666665442 21 112211 12 1234
Q ss_pred CcEEECChhhHHHhHHhh
Q 016293 374 PDFYTNKISDFLSLKAAA 391 (392)
Q Consensus 374 pd~v~~sl~el~~~~~~~ 391 (392)
++.++.+++|+++++...
T Consensus 237 ~~~~~~~~~el~~~l~~~ 254 (256)
T TIGR00715 237 GVAIFDDISQLNQFVARL 254 (256)
T ss_pred CCccCCCHHHHHHHHHHh
Confidence 456789999999988753
No 298
>COG0602 NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=56.47 E-value=17 Score=32.96 Aligned_cols=52 Identities=25% Similarity=0.432 Sum_probs=38.8
Q ss_pred CccHHHHhhcCcEEEEEccCceecCCee--CCCHHHHHHHHHHCCCcEEEEeCC
Q 016293 73 LKNADELIDSVETFIFDCDGVIWKGDKL--IDGVPETLDMLRSKGKRLVFVTNN 124 (392)
Q Consensus 73 ~~~~~~~~~~ik~vifDlDGTL~d~~~~--~~~~~eal~~l~~~Gi~~~i~Tn~ 124 (392)
.....+++.+++-.-...-|+.+.+.++ .+...+.++.++++|+++.+=||.
T Consensus 55 ~~~~~~I~~~i~~~~~~~~~V~lTGGEP~~~~~l~~Ll~~l~~~g~~~~lETng 108 (212)
T COG0602 55 PMSADEILADIKSLGYKARGVSLTGGEPLLQPNLLELLELLKRLGFRIALETNG 108 (212)
T ss_pred ccCHHHHHHHHHhcCCCcceEEEeCCcCCCcccHHHHHHHHHhCCceEEecCCC
Confidence 4455666666666545555777776666 337999999999999999999974
No 299
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=55.00 E-value=49 Score=34.03 Aligned_cols=57 Identities=21% Similarity=0.306 Sum_probs=45.9
Q ss_pred cCcEEEEEccCceec----CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCc
Q 016293 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (392)
Q Consensus 82 ~ik~vifDlDGTL~d----~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl 141 (392)
..+.+++=.+++++- ...+.+++.++++.|++.|+++.++| |.........-+.+|+
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~lt---GD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISELREAGIRVIMLT---GDNVLTAKAIAKELGI 386 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcCc
Confidence 356666666666543 77788999999999999999999999 7788777777788886
No 300
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=54.95 E-value=15 Score=34.01 Aligned_cols=35 Identities=11% Similarity=0.093 Sum_probs=27.9
Q ss_pred HHHHHhcCCCCCCEEEEEeCc-chHHHHHHcCCcee
Q 016293 182 AAYLKSIDFPKDKKVYVVGED-GILKELELAGFQYL 216 (392)
Q Consensus 182 ~~~l~~~~~~~~~~~~v~~~~-~~~~~l~~~g~~~~ 216 (392)
...++.+++.++..++++++. .++...+..|++.+
T Consensus 185 ~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v 220 (249)
T TIGR01457 185 EKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTL 220 (249)
T ss_pred HHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEE
Confidence 366777788888888998885 68899999998764
No 301
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=54.67 E-value=6 Score=40.79 Aligned_cols=17 Identities=24% Similarity=0.270 Sum_probs=14.0
Q ss_pred CcEEEEEccCceecCCe
Q 016293 83 VETFIFDCDGVIWKGDK 99 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~ 99 (392)
-+.++||+||||+.+..
T Consensus 22 ~~~~~FDfDGTLt~~~s 38 (497)
T PLN02177 22 NQTVAADLDGTLLISRS 38 (497)
T ss_pred ccEEEEecCCcccCCCC
Confidence 45799999999998554
No 302
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=54.13 E-value=1.1e+02 Score=33.33 Aligned_cols=69 Identities=10% Similarity=0.132 Sum_probs=47.7
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCC--------eEEEEecCCCChhhccCCCCCCCCcEEECC
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC--------KTLLVLSGVTSLSMLQSPNNSIQPDFYTNK 380 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~--------~~i~V~~G~~~~~~l~~~~~~~~pd~v~~s 380 (392)
.|..+..+...++..+.-+++-++++||. .+|=.|.....- ....++.|. ++ ..+.|...+
T Consensus 654 ~gvsk~~~~~~~~~~~~~~~df~~c~g~d-~tDed~~~~~~~~~~~~~~~~~F~~~~g~-~~---------t~a~~~~~~ 722 (732)
T KOG1050|consen 654 QGVSKGLAAERILSEMVKEPDFVLCIGDD-RTDEDMFEFISKAKDPEKVEEIFACTVGQ-KP---------SKAKYFLDD 722 (732)
T ss_pred cccchHHHHHHHHHhcCCCcceEEEecCC-CChHHHHHHHhhccCCcccceEEEEEcCC-CC---------cccccccCC
Confidence 46777888888888888566889999997 799988775532 122333343 21 357888888
Q ss_pred hhhHHHhH
Q 016293 381 ISDFLSLK 388 (392)
Q Consensus 381 l~el~~~~ 388 (392)
..|+.+.+
T Consensus 723 ~~~v~~~l 730 (732)
T KOG1050|consen 723 THEVIRLL 730 (732)
T ss_pred hHHHHhhc
Confidence 88887654
No 303
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=53.82 E-value=91 Score=34.26 Aligned_cols=41 Identities=20% Similarity=0.277 Sum_probs=33.1
Q ss_pred eeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 99 ~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
..-|++.++++..+..|+.+..+| |-.......+..+.|+-
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVT---GDNI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVT---GDNINTAKAIARECGIL 687 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEe---CCcHHHHHHHHHHcccc
Confidence 356899999999999999999999 66666666666666664
No 304
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=53.60 E-value=19 Score=40.79 Aligned_cols=44 Identities=16% Similarity=0.148 Sum_probs=39.0
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
...+-|++.++|+.|++.|++++++| |..........+++|+..
T Consensus 654 ~d~lr~~~~~~I~~l~~agi~v~miT---GD~~~TA~~iA~~~gii~ 697 (1054)
T TIGR01657 654 ENPLKPDTKEVIKELKRASIRTVMIT---GDNPLTAVHVARECGIVN 697 (1054)
T ss_pred ecCCCccHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCCC
Confidence 44577899999999999999999999 889999888889999853
No 305
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=52.85 E-value=24 Score=28.40 Aligned_cols=58 Identities=21% Similarity=0.304 Sum_probs=45.7
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
..+.+++|+.|+=+-+.....-...+++.++..|..++++. ..+.+...+..+|+...
T Consensus 43 ~~~~ivIDls~v~~~dS~gl~~L~~~~~~~~~~g~~~~l~~-----i~p~v~~~~~~~gl~~~ 100 (117)
T COG1366 43 GARGLVIDLSGVDFMDSAGLGVLVALLKSARLRGVELVLVG-----IQPEVARTLELTGLDKS 100 (117)
T ss_pred CCcEEEEECCCCceechHHHHHHHHHHHHHHhcCCeEEEEe-----CCHHHHHHHHHhCchhh
Confidence 35569999999865555554456778899999999999998 56788888999998743
No 306
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=49.29 E-value=30 Score=32.27 Aligned_cols=48 Identities=13% Similarity=0.237 Sum_probs=40.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHH----HHHHcCCeEEEEecC
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDIL----FGQNGGCKTLLVLSG 358 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~----ma~~aG~~~i~V~~G 358 (392)
|-+++.++..++++.|..|+.+|+|.|+ ...+. +++..|+..+++.+.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~-~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDN-KENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCC-HHHHHHHHHHHhhCCCcEEEEEEc
Confidence 6778899999999999999999999999 57776 445678888888764
No 307
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=47.59 E-value=25 Score=34.75 Aligned_cols=43 Identities=26% Similarity=0.341 Sum_probs=30.1
Q ss_pred cHHHHHHHHHHc----CCCCCcEEEEcCCc----hhhHHHHHHcCCeEEEEec
Q 016293 313 STFMMDYLANKF----GIQKSQICMVGDRL----DTDILFGQNGGCKTLLVLS 357 (392)
Q Consensus 313 ~p~~~~~~~~~l----gv~~~evi~IGD~l----~nDI~ma~~aG~~~i~V~~ 357 (392)
|.-.+..+-+.| ++.+++|+.|||+. .||. .|+.+| .|+||.+
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDf-kaR~a~-~t~WIas 400 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDF-KARLAC-TTAWIAS 400 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcch-hhhhhc-eeeEecC
Confidence 344566666667 89999999999983 1555 345555 7788876
No 308
>PRK06769 hypothetical protein; Validated
Probab=46.19 E-value=28 Score=30.20 Aligned_cols=120 Identities=10% Similarity=0.072 Sum_probs=88.8
Q ss_pred hcCcEEEEEccCceec--------CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCC-----HHHHHHhhHhCCceeeccc
Q 016293 81 DSVETFIFDCDGVIWK--------GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKS-----RKQYGKKFETLGLTVTEVK 147 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d--------~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~-----~~~~~~~l~~lgl~~~~~~ 147 (392)
..||++++|.||||-- .-.++|++.+.|++|+++|++++++||+++.. ...+...++.+|+...
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~--- 78 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI--- 78 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE---
Confidence 4699999999999932 23468999999999999999999999865321 1234555777777544
Q ss_pred cccceee-ecccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCceec
Q 016293 148 DSFLSIV-CLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLG 217 (392)
Q Consensus 148 ~~f~~~i-~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~ 217 (392)
|..+. +..+....||.| +.+. ..+++++..++.+++++++..++...++.|+..+.
T Consensus 79 --~~~~~~~~~~~~~~KP~p-----~~~~-------~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 79 --YLCPHKHGDGCECRKPST-----GMLL-------QAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred --EECcCCCCCCCCCCCCCH-----HHHH-------HHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 22222 234445677765 3333 77888888888999999999999999999998753
No 309
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=45.80 E-value=56 Score=27.74 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=27.0
Q ss_pred ccCceecCCeeCC-CHHHHHHHHHHCCCcEEEEeC
Q 016293 90 CDGVIWKGDKLID-GVPETLDMLRSKGKRLVFVTN 123 (392)
Q Consensus 90 lDGTL~d~~~~~~-~~~eal~~l~~~Gi~~~i~Tn 123 (392)
++|+.+.+.++.. ...+.++.++++|+++.+-||
T Consensus 62 ~~gVt~SGGEl~~~~l~~ll~~lk~~Gl~i~l~Tg 96 (147)
T TIGR02826 62 ISCVLFLGGEWNREALLSLLKIFKEKGLKTCLYTG 96 (147)
T ss_pred CCEEEEechhcCHHHHHHHHHHHHHCCCCEEEECC
Confidence 5687777555433 478999999999999999996
No 310
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=45.67 E-value=32 Score=28.88 Aligned_cols=118 Identities=23% Similarity=0.247 Sum_probs=86.1
Q ss_pred cEEEEEccCceecCCe-----------eCCCHHHHHHHHHHCCCcEEEEeCCCC--CC----------HHHHHHhhHhCC
Q 016293 84 ETFIFDCDGVIWKGDK-----------LIDGVPETLDMLRSKGKRLVFVTNNST--KS----------RKQYGKKFETLG 140 (392)
Q Consensus 84 k~vifDlDGTL~d~~~-----------~~~~~~eal~~l~~~Gi~~~i~Tn~~g--r~----------~~~~~~~l~~lg 140 (392)
++++||+||||.+++. ++|++.++|+.|+++|++++|+||..+ +. ...+...++.+|
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 80 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLG 80 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCC
Confidence 4799999999998663 689999999999999999999998642 11 134556678888
Q ss_pred ceeeccccccceeee-cccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCcee
Q 016293 141 LTVTEVKDSFLSIVC-LKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL 216 (392)
Q Consensus 141 l~~~~~~~~f~~~i~-~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~ 216 (392)
+... ..|..++. .......||.+ +.+ ...++++++.++.+++++++..+++..+..|++.+
T Consensus 81 l~~~---~~~~~~~~~~~~~~~~KP~~-----~~~-------~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 81 VAVD---GVLFCPHHPADNCSCRKPKP-----GLI-------LEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred Ccee---EEEECCCCCCCCCCCCCCCH-----HHH-------HHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 8632 00222222 22233456654 333 37788889988899999999999999999998764
No 311
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=44.61 E-value=12 Score=38.24 Aligned_cols=20 Identities=10% Similarity=0.243 Sum_probs=15.5
Q ss_pred cCcEEEEEccCceecCCeeC
Q 016293 82 SVETFIFDCDGVIWKGDKLI 101 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~ 101 (392)
..+.++||+||||+.+...+
T Consensus 7 ~~~~~~fD~DGTLlrs~ssF 26 (498)
T PLN02499 7 TSYSVVSELEGTLLKDADPF 26 (498)
T ss_pred ccceEEEecccceecCCCcc
Confidence 35579999999999865543
No 312
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=44.51 E-value=2.7e+02 Score=26.05 Aligned_cols=17 Identities=12% Similarity=0.128 Sum_probs=12.9
Q ss_pred HHHHHHcCCeEEEEecC
Q 016293 342 ILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 342 I~ma~~aG~~~i~V~~G 358 (392)
+++|+++|+..|.|...
T Consensus 215 i~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 215 IEAARELGIPVIMIERP 231 (257)
T ss_pred HHHHHHcCCcEEEEecC
Confidence 77788888888887664
No 313
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=44.08 E-value=38 Score=26.59 Aligned_cols=85 Identities=13% Similarity=0.030 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHHHHHHHHcCCCCCcEE
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 332 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~lgv~~~evi 332 (392)
++...+++..++..+...+++||............+...|-.+ +....--|...+-+++.++. ....++
T Consensus 16 ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~---------~~~~i~ts~~~~~~~l~~~~--~~~~v~ 84 (101)
T PF13344_consen 16 IPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV---------DEDEIITSGMAAAEYLKEHK--GGKKVY 84 (101)
T ss_dssp -TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-----------GGGEEEHHHHHHHHHHHHT--TSSEEE
T ss_pred CcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC---------CcCEEEChHHHHHHHHHhcC--CCCEEE
Confidence 5667888889988767778889887644333222222222111 00011122233344444443 356888
Q ss_pred EEcCCchhhHHHHHHcCC
Q 016293 333 MVGDRLDTDILFGQNGGC 350 (392)
Q Consensus 333 ~IGD~l~nDI~ma~~aG~ 350 (392)
++|-. ...+.++.+|+
T Consensus 85 vlG~~--~l~~~l~~~G~ 100 (101)
T PF13344_consen 85 VLGSD--GLREELREAGF 100 (101)
T ss_dssp EES-H--HHHHHHHHTTE
T ss_pred EEcCH--HHHHHHHHcCC
Confidence 88877 67777888775
No 314
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=43.31 E-value=35 Score=24.91 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=30.2
Q ss_pred HHHHHhcCCCCCCEEEEEeC-cchHHHHHHcCCceec
Q 016293 182 AAYLKSIDFPKDKKVYVVGE-DGILKELELAGFQYLG 217 (392)
Q Consensus 182 ~~~l~~~~~~~~~~~~v~~~-~~~~~~l~~~g~~~~~ 217 (392)
..+++++++.+.++++|+++ ..++...++.|+..+.
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~il 47 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTIL 47 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEE
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEE
Confidence 36677778888899999999 8999999999998653
No 315
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=42.34 E-value=48 Score=37.68 Aligned_cols=50 Identities=14% Similarity=0.032 Sum_probs=33.8
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEecCCCChhhccCCCCCCCCcEE--ECChhhHHHhHHh
Q 016293 329 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFY--TNKISDFLSLKAA 390 (392)
Q Consensus 329 ~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~~~l~~~~~~~~pd~v--~~sl~el~~~~~~ 390 (392)
.-|.|.||+ .||+.|.++|. |+|..|... ... -++++ .+++.-+.+.+.+
T Consensus 802 ~~V~m~GDG-~ND~~ALK~Ad---VGIam~~~d--as~------AA~f~l~~~~~~~I~~~I~e 853 (1054)
T TIGR01657 802 YTVGMCGDG-ANDCGALKQAD---VGISLSEAE--ASV------AAPFTSKLASISCVPNVIRE 853 (1054)
T ss_pred CeEEEEeCC-hHHHHHHHhcC---cceeecccc--cee------ecccccCCCcHHHHHHHHHH
Confidence 369999999 69999999998 666665432 111 24555 3567776666543
No 316
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=39.19 E-value=19 Score=31.40 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=32.0
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecCCCCh
Q 016293 320 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL 362 (392)
Q Consensus 320 ~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G~~~~ 362 (392)
+.+.++++ +++.|+.+|-++.|+++|++.+++.+-++..
T Consensus 129 ~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 129 AVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred hhHhhccC----ccccccCchHHHHHHhcCCcEEEecCccccc
Confidence 35556654 6899999999999999999999999977654
No 317
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=38.79 E-value=46 Score=28.84 Aligned_cols=113 Identities=20% Similarity=0.192 Sum_probs=81.7
Q ss_pred cEEEEEccCceecC---------CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCH------------HHHHHhhHhCCce
Q 016293 84 ETFIFDCDGVIWKG---------DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSR------------KQYGKKFETLGLT 142 (392)
Q Consensus 84 k~vifDlDGTL~d~---------~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~------------~~~~~~l~~lgl~ 142 (392)
|+++||.||||... -.++|++.++|+.|+++|++++++||+++... ..+...+..+++.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD 81 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 68999999999842 24689999999999999999999999875211 2233345555554
Q ss_pred eeccccccceeeec-----------ccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHc
Q 016293 143 VTEVKDSFLSIVCL-----------KFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELA 211 (392)
Q Consensus 143 ~~~~~~~f~~~i~~-----------~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~ 211 (392)
. ..++.+ ......||+| +.+ ...++++++.++.+++++++..+++..+++
T Consensus 82 ~-------~~i~~~~~~~~~~~~~~~~~~~~KP~p-----~~~-------~~a~~~~~~~~~~~v~VGDs~~Di~aA~~a 142 (176)
T TIGR00213 82 L-------DGIYYCPHHPEGVEEFRQVCDCRKPKP-----GML-------LQARKELHIDMAQSYMVGDKLEDMQAGVAA 142 (176)
T ss_pred c-------cEEEECCCCCcccccccCCCCCCCCCH-----HHH-------HHHHHHcCcChhhEEEEcCCHHHHHHHHHC
Confidence 2 222221 1233456654 333 377888899899999999999999999999
Q ss_pred CCce
Q 016293 212 GFQY 215 (392)
Q Consensus 212 g~~~ 215 (392)
|++.
T Consensus 143 G~~~ 146 (176)
T TIGR00213 143 KVKT 146 (176)
T ss_pred CCcE
Confidence 9976
No 318
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=38.44 E-value=69 Score=27.63 Aligned_cols=117 Identities=17% Similarity=0.219 Sum_probs=87.5
Q ss_pred hcCcEEEEEccCceecCCe-------------eCCCHHHHHHHHHHCCCcEEEEeCCCCCC-----H----HHHHHhhHh
Q 016293 81 DSVETFIFDCDGVIWKGDK-------------LIDGVPETLDMLRSKGKRLVFVTNNSTKS-----R----KQYGKKFET 138 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~~-------------~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~-----~----~~~~~~l~~ 138 (392)
.+.|.++||+||||+++.. ++|++.++|+.|+++|++++|+||.++.. . ..+...++.
T Consensus 11 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~ 90 (166)
T TIGR01664 11 PQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK 90 (166)
T ss_pred CcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence 3578999999999997432 46999999999999999999999966431 1 234567788
Q ss_pred CCceeeccccccceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhcC--CCCCCEEEEEeCc--------chHHHH
Q 016293 139 LGLTVTEVKDSFLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSID--FPKDKKVYVVGED--------GILKEL 208 (392)
Q Consensus 139 lgl~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~--~~~~~~~~v~~~~--------~~~~~l 208 (392)
+|+.. ..+++.+.....||.| +.+. ..+++++ +.++++++++++. .+++..
T Consensus 91 ~gl~~-------~~ii~~~~~~~~KP~p-----~~~~-------~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA 151 (166)
T TIGR01664 91 LKVPI-------QVLAATHAGLYRKPMT-----GMWE-------YLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFA 151 (166)
T ss_pred cCCCE-------EEEEecCCCCCCCCcc-----HHHH-------HHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHH
Confidence 89853 2456666655677765 3333 5666677 7778899999875 488999
Q ss_pred HHcCCcee
Q 016293 209 ELAGFQYL 216 (392)
Q Consensus 209 ~~~g~~~~ 216 (392)
+++|++..
T Consensus 152 ~~aGi~~~ 159 (166)
T TIGR01664 152 KNLGLEFK 159 (166)
T ss_pred HHCCCCcC
Confidence 99998874
No 319
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
Probab=37.24 E-value=43 Score=25.72 Aligned_cols=56 Identities=21% Similarity=0.292 Sum_probs=40.5
Q ss_pred CcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
.+.+++|+-++-.=+........+..+.++++|+++.++. ....+...+...|+..
T Consensus 41 ~~~lilD~~~v~~iDss~~~~L~~~~~~~~~~~~~~~l~~-----~~~~~~~~l~~~g~~~ 96 (107)
T cd07042 41 LKVVILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAG-----LNPQVRELLERAGLLD 96 (107)
T ss_pred ceEEEEECCCCchhhHHHHHHHHHHHHHHHHCCCEEEEec-----CCHHHHHHHHHcCcHH
Confidence 3688999998643333334445677888899999988886 4457888888888753
No 320
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=37.05 E-value=24 Score=25.34 Aligned_cols=25 Identities=48% Similarity=0.612 Sum_probs=15.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHH
Q 016293 317 MDYLANKFGIQKSQICMVGDRLDTDILFGQ 346 (392)
Q Consensus 317 ~~~~~~~lgv~~~evi~IGD~l~nDI~ma~ 346 (392)
+..+++++|+ ++++||. ..|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr-~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDR-LWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-H-HHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCCh-HHHHHHHH
Confidence 4678888886 8999999 59999875
No 321
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=36.31 E-value=55 Score=28.18 Aligned_cols=114 Identities=20% Similarity=0.306 Sum_probs=87.8
Q ss_pred cEEEEEccCceecCC------------eeCCCHHHHHHHHHHCCCcEEEEeCCCCC------------CHHHHHHhhHhC
Q 016293 84 ETFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTNNSTK------------SRKQYGKKFETL 139 (392)
Q Consensus 84 k~vifDlDGTL~d~~------------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr------------~~~~~~~~l~~l 139 (392)
|+++||.||||+++. .++|++.++|+.|+++|++++++||.+|. ....+...++.+
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ 81 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC
Confidence 689999999998832 36799999999999999999999997643 234566778888
Q ss_pred Cceeecccccccee-ee----cccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCc
Q 016293 140 GLTVTEVKDSFLSI-VC----LKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQ 214 (392)
Q Consensus 140 gl~~~~~~~~f~~~-i~----~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~ 214 (392)
|+. |..+ +| .......||.+ +.+ ...++++++.++.+++++++..+++..+..|+.
T Consensus 82 gl~-------fd~ii~~~~~~~~~~~~~KP~~-----~~~-------~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 82 GII-------FDDVLICPHFPDDNCDCRKPKI-----KLL-------EPYLKKNLIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CCc-------eeEEEECCCCCCCCCCCCCCCH-----HHH-------HHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 885 3334 34 35555667765 222 366777788888899999999999999999998
Q ss_pred ee
Q 016293 215 YL 216 (392)
Q Consensus 215 ~~ 216 (392)
.+
T Consensus 143 ~i 144 (161)
T TIGR01261 143 GI 144 (161)
T ss_pred EE
Confidence 75
No 322
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=35.59 E-value=1.1e+02 Score=30.45 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=36.7
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEec
Q 016293 313 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 357 (392)
Q Consensus 313 ~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~ 357 (392)
|..+|+.+.+++|- .-.-++|||. ..-..+|++..|..+-|..
T Consensus 410 KescFerI~~RFg~-K~~yvvIgdG-~eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 410 KESCFERIQSRFGR-KVVYVVIGDG-VEEEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHHHHHHhCC-ceEEEEecCc-HHHHHHHHhhCCceEeecc
Confidence 37789999999997 6678899999 5778899999998888765
No 323
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=35.24 E-value=3.3e+02 Score=30.70 Aligned_cols=50 Identities=20% Similarity=0.182 Sum_probs=37.7
Q ss_pred CceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 92 GTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
|-+.=.+++-+.+...|+.|++..|+.+.|| |-..-...-.-+..|+-.+
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcT---GDNllTaisVakeCgmi~p 747 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCT---GDNLLTAISVAKECGMIEP 747 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEc---CCchheeeehhhcccccCC
Confidence 4344456677889999999999999999999 6666666556666776544
No 324
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=33.43 E-value=87 Score=29.48 Aligned_cols=58 Identities=21% Similarity=0.362 Sum_probs=50.0
Q ss_pred CcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
.|.+++=+.|..+.+.++.+...+.+..|+..|++.+++=+ |+ ..+.+.++.+|++..
T Consensus 2 ~k~~VIK~GG~~~~~~~l~~~~~~di~lL~~~G~~~VvVHG--gg--p~I~~~l~~~gie~~ 59 (265)
T COG0548 2 GKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHG--GG--PQIDEMLAKLGIEPE 59 (265)
T ss_pred CceEEEEECceeecCchHHHHHHHHHHHHHHCCCcEEEEeC--Cc--hHHHHHHHHcCCCCe
Confidence 46889999999999999999999999999999999988885 33 567788999999865
No 325
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=32.15 E-value=1.1e+02 Score=29.42 Aligned_cols=42 Identities=10% Similarity=0.020 Sum_probs=32.9
Q ss_pred cCcEEEEEcc-----C--ceecCCeeCCCHHHHHHHHHHCCCcEEEEeC
Q 016293 82 SVETFIFDCD-----G--VIWKGDKLIDGVPETLDMLRSKGKRLVFVTN 123 (392)
Q Consensus 82 ~ik~vifDlD-----G--TL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn 123 (392)
.+..|.+|+| | ...-+.+.+|.-.+.+++|+++|+++++..+
T Consensus 39 P~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~kv~~~i~ 87 (319)
T cd06591 39 PLDVIVQDWFYWPKQGWGEWKFDPERFPDPKAMVRELHEMNAELMISIW 87 (319)
T ss_pred CccEEEEechhhcCCCceeEEEChhhCCCHHHHHHHHHHCCCEEEEEec
Confidence 4778999986 3 3322556789999999999999999987654
No 326
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=31.14 E-value=47 Score=22.30 Aligned_cols=34 Identities=29% Similarity=0.304 Sum_probs=24.4
Q ss_pred CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhC
Q 016293 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (392)
Q Consensus 97 ~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~l 139 (392)
...+++++..+++++++.|+.+ ++.-+...++..
T Consensus 14 ~~GlI~~~~~~l~~l~~~g~~i---------s~~l~~~~L~~~ 47 (48)
T PF11848_consen 14 RRGLISEVKPLLDRLQQAGFRI---------SPKLIEEILRRA 47 (48)
T ss_pred HcCChhhHHHHHHHHHHcCccc---------CHHHHHHHHHHc
Confidence 4456678999999999999875 555565555543
No 327
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=30.92 E-value=48 Score=29.00 Aligned_cols=19 Identities=21% Similarity=0.192 Sum_probs=15.3
Q ss_pred EEEEEccCceecCCeeCCC
Q 016293 85 TFIFDCDGVIWKGDKLIDG 103 (392)
Q Consensus 85 ~vifDlDGTL~d~~~~~~~ 103 (392)
-++.|+||||++.....|-
T Consensus 8 ~~ciDIDGtit~~~t~~~~ 26 (194)
T COG5663 8 RCCIDIDGTITDDPTFAPY 26 (194)
T ss_pred heeeccCCceecCcccchh
Confidence 4789999999997776653
No 328
>PRK11660 putative transporter; Provisional
Probab=30.15 E-value=78 Score=33.29 Aligned_cols=57 Identities=14% Similarity=0.130 Sum_probs=43.9
Q ss_pred hcCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 81 ~~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
...+.|++|+.++-.-+..-.....+..+++++ |+++.++. ....+.+.++..|+..
T Consensus 489 ~~~~~VVlD~~~V~~iDssg~~~L~~l~~~l~~-g~~l~l~~-----l~~~v~~~l~~~gl~~ 545 (568)
T PRK11660 489 EGKRIVVLQWDAVPVLDAGGLDAFQRFVKRLPE-GCELRICN-----LQFQPLRTLARAGIQP 545 (568)
T ss_pred CCCCEEEEEcCCCCcccHHHHHHHHHHHHHHHC-CCEEEEec-----CChHHHHHHHHCCChh
Confidence 457899999999765455555566788889999 99998887 4557888888888754
No 329
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=30.10 E-value=40 Score=34.30 Aligned_cols=24 Identities=42% Similarity=0.614 Sum_probs=19.1
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCC
Q 016293 101 IDGVPETLDMLRSKGKRLVFVTNN 124 (392)
Q Consensus 101 ~~~~~eal~~l~~~Gi~~~i~Tn~ 124 (392)
-|....+|++|+++|.+++++||+
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS 208 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNS 208 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS
T ss_pred CchHHHHHHHHHhcCceEEEecCC
Confidence 456889999999999999999984
No 330
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=29.93 E-value=84 Score=27.21 Aligned_cols=116 Identities=20% Similarity=0.195 Sum_probs=84.1
Q ss_pred cCcEEEEEccCceecCC----------eeCCCHHHHHHHHHHCCCcEEEEeCCCCCC------------HHHHHHhhHhC
Q 016293 82 SVETFIFDCDGVIWKGD----------KLIDGVPETLDMLRSKGKRLVFVTNNSTKS------------RKQYGKKFETL 139 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~----------~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~------------~~~~~~~l~~l 139 (392)
++|+++||+||||.... .++|++.++|+.|+++|++++|+||.++.. ...+...++.+
T Consensus 2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (181)
T PRK08942 2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR 81 (181)
T ss_pred CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc
Confidence 68999999999985422 468999999999999999999999865311 12233445666
Q ss_pred Cceeeccccccceeeec-----ccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcCCc
Q 016293 140 GLTVTEVKDSFLSIVCL-----KFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQ 214 (392)
Q Consensus 140 gl~~~~~~~~f~~~i~~-----~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g~~ 214 (392)
|+. |..++.. ......||.| +.+. ..++++++.++++++++++..++...+++|+.
T Consensus 82 g~~-------f~~i~~~~~~~~~~~~~~KP~p-----~~~~-------~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 82 GGR-------LDGIYYCPHHPEDGCDCRKPKP-----GMLL-------SIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred CCc-------cceEEECCCCCCCCCcCCCCCH-----HHHH-------HHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 662 3334332 2234567765 3333 67778888889999999999999999999987
Q ss_pred ee
Q 016293 215 YL 216 (392)
Q Consensus 215 ~~ 216 (392)
.+
T Consensus 143 ~i 144 (181)
T PRK08942 143 PV 144 (181)
T ss_pred EE
Confidence 64
No 331
>COG0353 RecR Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair]
Probab=29.85 E-value=2.7e+02 Score=24.96 Aligned_cols=65 Identities=20% Similarity=0.297 Sum_probs=46.1
Q ss_pred hhcCcEEEEEccCce--ecCCeeCC-CHHHHHHHHHHCCC-cEEEEeCCCCCCHHH---HHHhhHhCCceee
Q 016293 80 IDSVETFIFDCDGVI--WKGDKLID-GVPETLDMLRSKGK-RLVFVTNNSTKSRKQ---YGKKFETLGLTVT 144 (392)
Q Consensus 80 ~~~ik~vifDlDGTL--~d~~~~~~-~~~eal~~l~~~Gi-~~~i~Tn~~gr~~~~---~~~~l~~lgl~~~ 144 (392)
...|+...|=+.|+| +++..+-+ .....++++.+-.+ .++|+||.+--.... +.+.|+.+++.++
T Consensus 97 ~~~f~G~YhVL~G~lspl~gigpe~l~i~~L~~Rl~~~~~~EvIlAtnpTvEGeaTA~YI~~~l~~~~ikvt 168 (198)
T COG0353 97 TGEFRGLYHVLGGLLSPLDGIGPEDLNIDELLQRLAEGSIKEVILATNPTVEGEATALYIARLLKPLGLKVT 168 (198)
T ss_pred hcccCeeEEEecCccCcccCCCcccccHHHHHHHHhcCCCceEEEecCCCccchHHHHHHHHHHhhcCCeEE
Confidence 457999999999998 44444433 46777888888777 999999866443322 4556677788766
No 332
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=28.77 E-value=3.1e+02 Score=23.32 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=26.6
Q ss_pred cHHHHHHHHHHcCCCCCcE-EEEcCCchhhHHHHHHcCCeE
Q 016293 313 STFMMDYLANKFGIQKSQI-CMVGDRLDTDILFGQNGGCKT 352 (392)
Q Consensus 313 ~p~~~~~~~~~lgv~~~ev-i~IGD~l~nDI~ma~~aG~~~ 352 (392)
|.+.++.+.+.+.-..-.. +.+||+ .+|+++=+++|+..
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~-~~D~~~y~~~gi~~ 142 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNR-ITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCC-chhHHHHHHcCCCh
Confidence 4556666666553222234 459999 69999999999854
No 333
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=28.06 E-value=57 Score=26.26 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=25.4
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHH
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQ 131 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~ 131 (392)
-.+++.++++.++++|++++.+|++..-+...
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~ 90 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAK 90 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhh
Confidence 45678999999999999999999765544443
No 334
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=27.95 E-value=1.1e+02 Score=29.14 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=33.0
Q ss_pred cCcEEEEEcc-C-------------ceecCCeeCCCHHHHHHHHHHCCCcEEEEeC
Q 016293 82 SVETFIFDCD-G-------------VIWKGDKLIDGVPETLDMLRSKGKRLVFVTN 123 (392)
Q Consensus 82 ~ik~vifDlD-G-------------TL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn 123 (392)
.+.+|.+|+| - ...-+...+|+-.+.++.|+++|+++++...
T Consensus 40 P~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~v~~v~ 95 (292)
T cd06595 40 PLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLLQDLHDRGLKVTLNLH 95 (292)
T ss_pred CccEEEEecccccccccccccCCcceeEEChhcCCCHHHHHHHHHHCCCEEEEEeC
Confidence 4779999987 1 1222456789999999999999999998775
No 335
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=27.94 E-value=1.9e+02 Score=30.08 Aligned_cols=50 Identities=24% Similarity=0.304 Sum_probs=40.3
Q ss_pred CceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCceee
Q 016293 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (392)
Q Consensus 92 GTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~ 144 (392)
|+++-...+-|+.+|-+.+||+.|++-+.|| |-.+-....+-.+.|++..
T Consensus 440 GVI~LkDivK~Gi~ERf~elR~MgIkTvM~T---GDN~~TAa~IA~EAGVDdf 489 (681)
T COG2216 440 GVIYLKDIVKPGIKERFAELRKMGIKTVMIT---GDNPLTAAAIAAEAGVDDF 489 (681)
T ss_pred EEEEehhhcchhHHHHHHHHHhcCCeEEEEe---CCCHHHHHHHHHHhCchhh
Confidence 4444455667899999999999999999999 7777777777788888754
No 336
>PTZ00124 adenosine deaminase; Provisional
Probab=27.87 E-value=5.1e+02 Score=25.54 Aligned_cols=35 Identities=20% Similarity=0.253 Sum_probs=24.5
Q ss_pred cEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEe
Q 016293 84 ETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVT 122 (392)
Q Consensus 84 k~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~T 122 (392)
+.|.||++|-= ..++.-.++++.+++.|+++.+=.
T Consensus 192 ~vvGiDLaG~E----~~~~~f~~~f~~Ar~~Gl~~t~Ha 226 (362)
T PTZ00124 192 DFVGFDHAGHE----VDLKPFKDIFDYVREAGVNLTVHA 226 (362)
T ss_pred CeEEEeccCCC----CCcHHHHHHHHHHHHCCCCEEEEe
Confidence 37889999831 113445678888888888877666
No 337
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.84 E-value=70 Score=23.14 Aligned_cols=25 Identities=44% Similarity=0.557 Sum_probs=21.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHH
Q 016293 317 MDYLANKFGIQKSQICMVGDRLDTDILFGQ 346 (392)
Q Consensus 317 ~~~~~~~lgv~~~evi~IGD~l~nDI~ma~ 346 (392)
.+++++.+|+ ++++||. ..||+|.+
T Consensus 7 VqQlLK~~G~----ivyfg~r-~~~iemm~ 31 (68)
T COG4483 7 VQQLLKKFGI----IVYFGKR-LYDIEMMQ 31 (68)
T ss_pred HHHHHHHCCe----eeecCCH-HHHHHHHH
Confidence 4578888886 8899999 59999976
No 338
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=27.76 E-value=1.1e+02 Score=24.78 Aligned_cols=112 Identities=23% Similarity=0.403 Sum_probs=85.4
Q ss_pred cEEEEEccCceecC---------CeeCCCHHHHHHHHHHCCCcEEEEeCCCCCC-----HHHHHHhhHhCCceeeccccc
Q 016293 84 ETFIFDCDGVIWKG---------DKLIDGVPETLDMLRSKGKRLVFVTNNSTKS-----RKQYGKKFETLGLTVTEVKDS 149 (392)
Q Consensus 84 k~vifDlDGTL~d~---------~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~-----~~~~~~~l~~lgl~~~~~~~~ 149 (392)
|+++||+||||+++ ..++|++.++|+.|+++|++++++||+++.. ...+...++.+|+...
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~----- 75 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID----- 75 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-----
Confidence 68999999999963 4678999999999999999999999865322 4557778888888643
Q ss_pred cceeeecccccCCCCCCCCcchhhhhchHHHHHHHHHhc-CCCCCCEEEEEe-CcchHHHHHHcCCcee
Q 016293 150 FLSIVCLKFHRIPSPNSSEFSQEEIFASSFAAAAYLKSI-DFPKDKKVYVVG-EDGILKELELAGFQYL 216 (392)
Q Consensus 150 f~~~i~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~-~~~~~~~~~v~~-~~~~~~~l~~~g~~~~ 216 (392)
| ++... ...||.+ +.+ ...++++ ++.+++.+++++ ...++...+..|+..+
T Consensus 76 ~--~~~~~--~~~KP~~-----~~~-------~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i 128 (132)
T TIGR01662 76 V--LYACP--HCRKPKP-----GMF-------LEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFI 128 (132)
T ss_pred E--EEECC--CCCCCCh-----HHH-------HHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEE
Confidence 2 22222 3456654 322 3677788 588889999999 6889999999998764
No 339
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=26.86 E-value=1.1e+02 Score=25.26 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=31.3
Q ss_pred CcEEEEEccCceecCCeeCCC------HHHHHHHHHHCCCcEEEEe
Q 016293 83 VETFIFDCDGVIWKGDKLIDG------VPETLDMLRSKGKRLVFVT 122 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~------~~eal~~l~~~Gi~~~i~T 122 (392)
..-|+|=.|||+.-.+...|. ..++++.+.++|+++.+|-
T Consensus 34 ~v~iFly~DgV~~~~~~~~Pa~dEf~l~~~~~~l~~~~gv~v~~C~ 79 (126)
T COG1553 34 LVRLFLYQDGVHNGNKGQKPASDEFNLIQAWLELLTEQGVPVKLCV 79 (126)
T ss_pred EEEEEEeeccccccccCCCCcccccchHHHHHHHHHHcCCcEeeeH
Confidence 456899999998765554443 6788999999999998875
No 340
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=26.40 E-value=52 Score=32.77 Aligned_cols=51 Identities=22% Similarity=0.270 Sum_probs=41.4
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHH-HHHcCCeEEEEecCC
Q 016293 309 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILF-GQNGGCKTLLVLSGV 359 (392)
Q Consensus 309 ~gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~m-a~~aG~~~i~V~~G~ 359 (392)
.+++++.....+.+.++..-.++++|||++..||.- -+.-|+++++|....
T Consensus 285 ~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL 336 (424)
T KOG2469|consen 285 GGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPEL 336 (424)
T ss_pred cccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhh
Confidence 456777888889999999889999999999888863 356789999987543
No 341
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=26.21 E-value=25 Score=25.18 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=24.7
Q ss_pred CcEEEEEccCceecCCeeCCCHHHHHHHHHH
Q 016293 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRS 113 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~~~eal~~l~~ 113 (392)
=..|+||=|+.-+|+..++|.+..+++.++.
T Consensus 24 es~iiFDNded~tdSa~llp~ie~a~~~~r~ 54 (65)
T PF06117_consen 24 ESDIIFDNDEDKTDSAALLPAIEQARADVRP 54 (65)
T ss_pred CCCeeecCCCcccchHHHHHHHHHHHHHHHH
Confidence 4479999999999999998877666665544
No 342
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=26.11 E-value=33 Score=33.59 Aligned_cols=28 Identities=25% Similarity=0.106 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccc
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVT 280 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~ 280 (392)
++.+.+.+..+++.....+|+||.+...
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~y 213 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDY 213 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHH
Confidence 5677888888887666789999998754
No 343
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=25.18 E-value=71 Score=25.60 Aligned_cols=26 Identities=23% Similarity=0.293 Sum_probs=22.2
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCC
Q 016293 101 IDGVPETLDMLRSKGKRLVFVTNNST 126 (392)
Q Consensus 101 ~~~~~eal~~l~~~Gi~~~i~Tn~~g 126 (392)
.+++.++++.++++|.+++.+|++..
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~ 84 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVG 84 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 45689999999999999999997643
No 344
>PF13466 STAS_2: STAS domain
Probab=24.64 E-value=1.6e+02 Score=21.39 Aligned_cols=55 Identities=18% Similarity=0.279 Sum_probs=37.5
Q ss_pred CcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 83 ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
-+-+.+|+-++=.=+..-..-..++.+.++++|.++.+.- ....+.+.++.+|++
T Consensus 26 ~~~v~lDls~v~~iDsagl~lL~~~~~~~~~~g~~~~l~~-----~~~~~~~ll~~~gld 80 (80)
T PF13466_consen 26 GRPVVLDLSGVEFIDSAGLQLLLAAARRARARGRQLRLTG-----PSPALRRLLELLGLD 80 (80)
T ss_pred CCeEEEECCCCCeecHHHHHHHHHHHHHHHHCCCeEEEEc-----CCHHHHHHHHHhCcC
Confidence 3788999988643333333334567778888999988855 556677788877763
No 345
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=24.08 E-value=96 Score=23.04 Aligned_cols=46 Identities=17% Similarity=0.374 Sum_probs=36.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 310 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 310 gKP~p~~~~~~~~~lgv~~~evi~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
..|-...++++++.+++++..+..|-+. ...|.-++.|| -|+...|
T Consensus 25 ~aPftAvlkfaAEeFkv~~~TsAiiTnd-GvGINP~qtAG--nvflkhg 70 (82)
T cd01766 25 STPFTAVLKFAAEEFKVPAATSAIITND-GIGINPAQTAG--NVFLKHG 70 (82)
T ss_pred cCchHHHHHHHHHhcCCCccceeEEecC-ccccChhhccc--ceeeecC
Confidence 3466778999999999999999888888 68999999998 3444443
No 346
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=23.63 E-value=80 Score=33.14 Aligned_cols=57 Identities=19% Similarity=0.278 Sum_probs=44.2
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
..+.+++|+.++-.-+..-.....+..++++++|+++.++- ....+.+.++..|+..
T Consensus 493 ~~~~vIlD~~~V~~iDsSg~~~L~~l~~~l~~~g~~l~l~~-----~~~~v~~~l~~~gl~~ 549 (563)
T TIGR00815 493 PLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLAN-----PNKAVRSTLKRGGLVE 549 (563)
T ss_pred CceEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEec-----CChHHHHHHHHCCchh
Confidence 36899999998765455555556788888999999999987 4567888888888754
No 347
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=23.28 E-value=6.7e+02 Score=24.06 Aligned_cols=40 Identities=23% Similarity=0.385 Sum_probs=31.4
Q ss_pred cCcEEEEEccCceecCCeeCCCHHHHHHHHHHCC-CcEEEEeCCC
Q 016293 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKG-KRLVFVTNNS 125 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~~~~~~~~~eal~~l~~~G-i~~~i~Tn~~ 125 (392)
+++.|.|=.+| .-.++|..-+.|+.+++.| ++.+++||.+
T Consensus 79 ~pd~vtis~~G----EPTLy~~L~elI~~~k~~g~~~tflvTNgs 119 (296)
T COG0731 79 EPDHVTISLSG----EPTLYPNLGELIEEIKKRGKKTTFLVTNGS 119 (296)
T ss_pred CCCEEEEeCCC----CcccccCHHHHHHHHHhcCCceEEEEeCCC
Confidence 45566666665 3456888999999999999 7999999954
No 348
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=23.23 E-value=41 Score=28.53 Aligned_cols=56 Identities=16% Similarity=0.266 Sum_probs=33.0
Q ss_pred EEEccCceec-CCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCce
Q 016293 87 IFDCDGVIWK-GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (392)
Q Consensus 87 ifDlDGTL~d-~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~ 142 (392)
+-|=||||+- ...+.-++.-.++.++++++++.++.-........+..++...++.
T Consensus 61 V~DsDgTlI~~~g~l~GGt~lT~~~a~~~~KP~l~i~~~~~~~~~~v~~wl~~~~i~ 117 (145)
T PF12694_consen 61 VRDSDGTLIFTRGELTGGTALTVEFARKHGKPCLHIDLSIPEAAAAVAEWLREHNIR 117 (145)
T ss_dssp HHTSSEEEEEESSS--HHHHHHHHHHHHTT--EEEETS-HHHHHHHHHHHHHHTT--
T ss_pred hhhcCeEEEEecCCCCcHHHHHHHHHHHhCCCEEEEecCcccHHHHHHHHHHHCCce
Confidence 4588999864 4455557999999999999999888311112224455555555554
No 349
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=23.06 E-value=7.3e+02 Score=24.41 Aligned_cols=116 Identities=19% Similarity=0.220 Sum_probs=86.4
Q ss_pred cCcEEEEEccCceecC------------CeeCCCHHHHHHHHHHCCCcEEEEeCCCCC------------CHHHHHHhhH
Q 016293 82 SVETFIFDCDGVIWKG------------DKLIDGVPETLDMLRSKGKRLVFVTNNSTK------------SRKQYGKKFE 137 (392)
Q Consensus 82 ~ik~vifDlDGTL~d~------------~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr------------~~~~~~~~l~ 137 (392)
+.|+++||.||||+.. ..++|++.++|+.|+++|++++|+||.+|- +...+...++
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~ 80 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE 80 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence 3679999999999874 357899999999999999999999996431 2334555677
Q ss_pred hCCceeeccccccceeeec-----ccccCCCCCCCCcchhhhhchHHHHHHHHHhcCCCCCCEEEEEeCcchHHHHHHcC
Q 016293 138 TLGLTVTEVKDSFLSIVCL-----KFHRIPSPNSSEFSQEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAG 212 (392)
Q Consensus 138 ~lgl~~~~~~~~f~~~i~~-----~~~~~~~~~~~~~~~e~i~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~l~~~g 212 (392)
.+|+. |+.++.. +.....||.| +.+. .++++.++.+++.++++++..++...+..|
T Consensus 81 ~~gl~-------fd~i~i~~~~~sd~~~~rKP~p-----~~l~-------~a~~~l~v~~~~svmIGDs~sDi~aAk~aG 141 (354)
T PRK05446 81 SQGIK-------FDEVLICPHFPEDNCSCRKPKT-----GLVE-------EYLAEGAIDLANSYVIGDRETDVQLAENMG 141 (354)
T ss_pred HcCCc-------eeeEEEeCCcCcccCCCCCCCH-----HHHH-------HHHHHcCCCcccEEEEcCCHHHHHHHHHCC
Confidence 77874 3344332 3344556654 2332 666777888889999999999999999999
Q ss_pred Ccee
Q 016293 213 FQYL 216 (392)
Q Consensus 213 ~~~~ 216 (392)
++.+
T Consensus 142 i~~I 145 (354)
T PRK05446 142 IKGI 145 (354)
T ss_pred CeEE
Confidence 9874
No 350
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=23.03 E-value=2.2e+02 Score=27.38 Aligned_cols=42 Identities=19% Similarity=0.237 Sum_probs=32.9
Q ss_pred cCcEEEEEcc-----------CceecCCeeCCCHHHHHHHHHHCCCcEEEEeC
Q 016293 82 SVETFIFDCD-----------GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTN 123 (392)
Q Consensus 82 ~ik~vifDlD-----------GTL~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn 123 (392)
.+..|.+|+| |...-+.+.+|.-.+.++.|+++|+++++..+
T Consensus 39 P~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k~~~~v~ 91 (317)
T cd06598 39 PLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPAGMIADLAKKGVKTIVITE 91 (317)
T ss_pred CceEEEEechhhcCcccCCceeeeEeccccCCCHHHHHHHHHHcCCcEEEEEc
Confidence 4778999976 22322566789999999999999999998775
No 351
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=22.34 E-value=1.4e+02 Score=23.84 Aligned_cols=26 Identities=23% Similarity=0.438 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCC
Q 016293 101 IDGVPETLDMLRSKGKRLVFVTNNST 126 (392)
Q Consensus 101 ~~~~~eal~~l~~~Gi~~~i~Tn~~g 126 (392)
..+..+.++.++++|.+++.+|++.+
T Consensus 66 ~~~~~~~~~~ak~~g~~vi~iT~~~~ 91 (131)
T PF01380_consen 66 TRELIELLRFAKERGAPVILITSNSE 91 (131)
T ss_dssp THHHHHHHHHHHHTTSEEEEEESSTT
T ss_pred chhhhhhhHHHHhcCCeEEEEeCCCC
Confidence 34688999999999999999996543
No 352
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=22.20 E-value=1e+02 Score=24.83 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=23.6
Q ss_pred eCCCHHHHHHHHHHCCCcEEEEeCCCCCC
Q 016293 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKS 128 (392)
Q Consensus 100 ~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~ 128 (392)
-.+++.++++.++++|.+++.+|++..-+
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSP 87 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCc
Confidence 35678999999999999999999754433
No 353
>COG4996 Predicted phosphatase [General function prediction only]
Probab=21.97 E-value=3.9e+02 Score=22.53 Aligned_cols=78 Identities=17% Similarity=0.091 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCccccccccccccCCCccceeeecccCCCccccCCCcHHHH---HHHHHHc-----
Q 016293 253 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMM---DYLANKF----- 324 (392)
Q Consensus 253 ~~~~~~~~~~l~~~~g~~~I~tn~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gKP~p~~~---~~~~~~l----- 324 (392)
|..+.+.+...+..+.+.-..+........+ ++...+...+++.+ +-+|.|.-+ -++++.+
T Consensus 43 ~~~v~~~l~warnsG~i~~~~sWN~~~kA~~-aLral~~~~yFhy~----------ViePhP~K~~ML~~llr~i~~er~ 111 (164)
T COG4996 43 FPDVKETLKWARNSGYILGLASWNFEDKAIK-ALRALDLLQYFHYI----------VIEPHPYKFLMLSQLLREINTERN 111 (164)
T ss_pred cHHHHHHHHHHHhCCcEEEEeecCchHHHHH-HHHHhchhhhEEEE----------EecCCChhHHHHHHHHHHHHHhhc
Confidence 5667777777775554444455444322111 11222233233322 345655433 3444433
Q ss_pred -CCCCCcEEEEcCCchhhH
Q 016293 325 -GIQKSQICMVGDRLDTDI 342 (392)
Q Consensus 325 -gv~~~evi~IGD~l~nDI 342 (392)
.++|++++++.|+ .--+
T Consensus 112 ~~ikP~~Ivy~DDR-~iH~ 129 (164)
T COG4996 112 QKIKPSEIVYLDDR-RIHF 129 (164)
T ss_pred cccCcceEEEEecc-cccH
Confidence 4789999999998 4433
No 354
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=21.90 E-value=1.7e+02 Score=27.08 Aligned_cols=51 Identities=22% Similarity=0.293 Sum_probs=39.3
Q ss_pred CCeeCCCHHHHHHHH--HHCCCcEEEEeCCCCCCHHHHHHhhHhCCceeeccccccceeee
Q 016293 97 GDKLIDGVPETLDML--RSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEVKDSFLSIVC 155 (392)
Q Consensus 97 ~~~~~~~~~eal~~l--~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~~~~~~~f~~~i~ 155 (392)
+-.+.|+..++++.+ ++.|+.++|+|. -..-.+..+|+..|+... |.-|++
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~gl~~~-----f~~I~T 121 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHHGLRDC-----FSEIFT 121 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhCCCccc-----cceEEe
Confidence 556788999999999 558999999995 345667788899998755 555444
No 355
>KOG0460 consensus Mitochondrial translation elongation factor Tu [Translation, ribosomal structure and biogenesis]
Probab=21.88 E-value=2.8e+02 Score=27.41 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=21.9
Q ss_pred EEEccCceec---CCeeCCCHHHHHHHHHHCCCcEEE
Q 016293 87 IFDCDGVIWK---GDKLIDGVPETLDMLRSKGKRLVF 120 (392)
Q Consensus 87 ifDlDGTL~d---~~~~~~~~~eal~~l~~~Gi~~~i 120 (392)
.--|||-++- +..+.|.++|.|-.+++-|++-++
T Consensus 138 aaqMDGaILVVaatDG~MPQTrEHlLLArQVGV~~iv 174 (449)
T KOG0460|consen 138 AAQMDGAILVVAATDGPMPQTREHLLLARQVGVKHIV 174 (449)
T ss_pred ccccCceEEEEEcCCCCCcchHHHHHHHHHcCCceEE
Confidence 3456666543 555677777777777777765443
No 356
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=21.72 E-value=4.5e+02 Score=29.22 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=36.4
Q ss_pred eecCCeeCCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhhHhCCcee
Q 016293 94 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (392)
Q Consensus 94 L~d~~~~~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l~~lgl~~ 143 (392)
|+-+-.+-+++++.|+.|++.+++++.+| |-.+-.....-+++|+..
T Consensus 670 lif~CPlK~Ds~~~I~el~~SSH~vvMIT---GDnpLTAchVak~v~iv~ 716 (1160)
T KOG0209|consen 670 LIFSCPLKPDSKKTIKELNNSSHRVVMIT---GDNPLTACHVAKEVGIVE 716 (1160)
T ss_pred EEEeCCCCccHHHHHHHHhccCceEEEEe---CCCccchheehheeeeec
Confidence 33344566789999999999999999999 677777766677777753
No 357
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=21.67 E-value=2.6e+02 Score=29.46 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=35.9
Q ss_pred EEEEEccCceecCCee-CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHhh-HhCCc
Q 016293 85 TFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGL 141 (392)
Q Consensus 85 ~vifDlDGTL~d~~~~-~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~~~~~l-~~lgl 141 (392)
+-++|+||-+++-..- --.--+.+....+.|.+++++|.-+ ++.+..+.+ ..+|-
T Consensus 257 iAvldldGevl~~~S~r~~~~~eVve~I~~lG~PvvVAtDVt--p~P~~V~KiAasf~A 313 (652)
T COG2433 257 IAVLDLDGEVLDLESRRGIDRSEVVEFISELGKPVVVATDVT--PAPETVKKIAASFNA 313 (652)
T ss_pred EEEEecCCcEEeeeccccCCHHHHHHHHHHcCCceEEEccCC--CChHHHHHHHHHcCC
Confidence 6789999999882221 1134456677788899999999643 444444444 55654
No 358
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=21.51 E-value=1.5e+02 Score=25.51 Aligned_cols=31 Identities=10% Similarity=0.169 Sum_probs=24.5
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCCHHH
Q 016293 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQ 131 (392)
Q Consensus 101 ~~~~~eal~~l~~~Gi~~~i~Tn~~gr~~~~ 131 (392)
.+++.++++.++++|.+++.+|++..-+...
T Consensus 85 t~~~i~~~~~ak~~g~~ii~IT~~~~s~la~ 115 (179)
T TIGR03127 85 TESLVTVAKKAKEIGATVAAITTNPESTLGK 115 (179)
T ss_pred cHHHHHHHHHHHHCCCeEEEEECCCCCchHH
Confidence 5568899999999999999999765444333
No 359
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.73 E-value=1.8e+02 Score=23.21 Aligned_cols=26 Identities=12% Similarity=0.417 Sum_probs=21.8
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCC
Q 016293 102 DGVPETLDMLRSKGKRLVFVTNNSTK 127 (392)
Q Consensus 102 ~~~~eal~~l~~~Gi~~~i~Tn~~gr 127 (392)
+...++++.++++|++++.+|++...
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~ 99 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANS 99 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 46788999999999999999975443
No 360
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=20.64 E-value=2.6e+02 Score=29.14 Aligned_cols=26 Identities=19% Similarity=0.301 Sum_probs=22.1
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEecC
Q 016293 331 ICMVGDRLDTDILFGQNGGCKTLLVLSG 358 (392)
Q Consensus 331 vi~IGD~l~nDI~ma~~aG~~~i~V~~G 358 (392)
-++|||.+ . ..+|+.+|+.+|++.++
T Consensus 147 ~~viG~~~-~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 147 GAVVGAGL-I-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred CEEECChH-H-HHHHHHcCCceEEEecH
Confidence 36789994 4 78899999999999886
No 361
>COG0050 TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis]
Probab=20.10 E-value=2.6e+02 Score=27.04 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=23.0
Q ss_pred EEEccCceec---CCeeCCCHHHHHHHHHHCCCcEEEE
Q 016293 87 IFDCDGVIWK---GDKLIDGVPETLDMLRSKGKRLVFV 121 (392)
Q Consensus 87 ifDlDGTL~d---~~~~~~~~~eal~~l~~~Gi~~~i~ 121 (392)
+--|||-++- ...+.|++++.+-..++-|++.+++
T Consensus 96 AaqmDgAILVVsA~dGpmPqTrEHiLlarqvGvp~ivv 133 (394)
T COG0050 96 AAQMDGAILVVAATDGPMPQTREHILLARQVGVPYIVV 133 (394)
T ss_pred HHhcCccEEEEEcCCCCCCcchhhhhhhhhcCCcEEEE
Confidence 3456666543 5567778888888888888755443
Done!