Query 016295
Match_columns 392
No_of_seqs 242 out of 2034
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 11:11:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016295.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016295hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 2.2E-69 7.4E-74 522.8 28.5 347 28-389 1-364 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 2.5E-67 8.7E-72 509.5 29.8 353 26-389 6-377 (383)
3 1qdm_A Prophytepsin; aspartic 100.0 1.4E-63 4.8E-68 495.8 27.5 353 29-389 1-472 (478)
4 4aa9_A Chymosin; hydrolase, as 100.0 1.1E-61 3.6E-66 461.2 27.8 303 74-389 2-314 (320)
5 3cms_A Chymosin B; hydrolase, 100.0 3.3E-61 1.1E-65 458.3 29.9 305 72-389 3-317 (323)
6 3k1w_A Renin; protease, altern 100.0 1.6E-61 5.5E-66 464.0 27.9 312 71-389 6-334 (341)
7 1tzs_A Cathepsin E; hydrolase, 100.0 6.4E-61 2.2E-65 461.2 30.1 313 71-389 11-336 (351)
8 1miq_A Plasmepsin; aspartic pr 100.0 1E-60 3.5E-65 462.9 28.7 305 71-389 50-368 (375)
9 1dpj_A Proteinase A; proteinas 100.0 2.5E-60 8.7E-65 453.3 29.5 306 73-389 3-323 (329)
10 3qvc_A Histo-aspartic protease 100.0 1.5E-60 5E-65 470.1 28.2 303 71-388 125-442 (451)
11 1am5_A Pepsin, acid proteinase 100.0 4.5E-60 1.5E-64 450.7 26.7 303 74-389 3-318 (324)
12 2bju_A Plasmepsin II; aspartic 100.0 5.2E-60 1.8E-64 465.6 28.0 306 71-389 126-444 (453)
13 1htr_B Gastricsin; aspartyl pr 100.0 4.6E-60 1.6E-64 451.6 25.9 306 73-389 3-323 (329)
14 1mpp_A Pepsin; hydrolase(acid 100.0 1.4E-58 4.7E-63 446.9 30.0 309 71-389 6-349 (361)
15 1yg9_A Aspartic protease BLA G 100.0 8.3E-59 2.8E-63 442.8 27.5 303 71-389 5-323 (330)
16 3c9x_A Trichoderma reesei aspa 100.0 1.9E-57 6.5E-62 433.3 29.7 298 79-389 11-324 (329)
17 2apr_A Rhizopuspepsin; hydrola 100.0 5.6E-57 1.9E-61 429.3 30.6 296 79-389 11-318 (325)
18 1oew_A Endothiapepsin; hydrola 100.0 3.5E-57 1.2E-61 431.5 27.8 295 81-389 13-324 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 1.8E-56 6.2E-61 428.5 31.7 294 73-389 3-323 (339)
20 2qzx_A Candidapepsin-5; aspart 100.0 4.1E-56 1.4E-60 426.5 30.4 297 73-389 3-325 (342)
21 3pvk_A Candidapepsin-2; hydrol 100.0 8.9E-56 3E-60 424.3 29.9 298 73-389 3-325 (342)
22 1j71_A Candidapepsin, aspartic 100.0 1.5E-55 5.1E-60 421.2 30.5 295 73-389 3-318 (334)
23 1ibq_A Aspergillopepsin; aspar 100.0 2.2E-55 7.5E-60 418.4 27.9 293 81-389 12-319 (325)
24 1izd_A Aspartic proteinase; su 100.0 2.6E-55 8.8E-60 417.4 27.3 296 73-389 7-317 (323)
25 1bxo_A Protein (penicillopepsi 100.0 2.1E-55 7.1E-60 418.2 23.1 296 73-389 7-317 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 2E-53 6.9E-58 407.5 28.1 292 73-389 3-327 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 4E-54 1.4E-58 427.6 20.0 304 74-389 65-414 (455)
28 1b5f_A Protein (cardosin A); h 100.0 1E-52 3.5E-57 382.5 26.0 237 73-313 3-239 (239)
29 2ewy_A Beta-secretase 2; BACE2 100.0 2.4E-52 8.1E-57 406.4 24.6 303 75-389 5-349 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 1.8E-52 6.2E-57 409.8 21.5 301 77-389 22-368 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 1.3E-51 4.5E-56 402.6 22.7 302 75-389 13-361 (395)
32 3aup_A SBG7S, BG, basic 7S glo 100.0 8.9E-50 3E-54 390.5 22.6 299 72-389 9-380 (403)
33 3vla_A EDGP; extracellular, in 100.0 4.5E-48 1.5E-52 378.4 17.0 302 71-389 7-393 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 1.5E-45 5.1E-50 358.0 13.3 291 74-389 4-367 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 1.6E-39 5.5E-44 296.1 21.8 221 164-389 1-235 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.3E-25 4.6E-30 173.5 10.7 93 73-165 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.0 6.7E-11 2.3E-15 89.1 2.6 72 314-389 1-81 (87)
38 2i1a_A DNA damage-inducible pr 95.5 0.019 6.4E-07 46.9 5.6 97 75-196 17-115 (148)
39 3s8i_A Protein DDI1 homolog 1; 92.0 0.19 6.4E-06 40.9 5.0 91 82-196 22-114 (148)
40 3vcm_P Prorenin; aspartic prot 86.6 0.55 1.9E-05 29.2 3.0 25 27-51 7-31 (43)
41 1htr_P Progastricsin (Pro segm 85.6 1 3.5E-05 27.6 3.9 26 28-53 2-27 (43)
42 2hs1_A HIV-1 protease; ultra-h 84.6 1.4 4.8E-05 32.9 4.8 31 85-117 9-39 (99)
43 1fmb_A EIAV protease; hydrolas 81.4 1.7 5.6E-05 32.9 4.2 28 84-113 8-35 (104)
44 1tzs_P Activation peptide from 80.4 1.2 4E-05 25.8 2.5 27 27-53 2-28 (35)
45 3ec0_A Protease; HIV-2, inhibi 80.4 2.4 8.3E-05 31.6 4.7 31 84-116 8-38 (99)
46 3liy_A Protease; hydrolase, hy 77.0 2.4 8E-05 32.4 3.8 33 85-117 11-46 (116)
47 2hah_A Protease, retropepsin; 68.8 5 0.00017 30.9 3.9 29 84-115 14-42 (116)
48 2i1a_A DNA damage-inducible pr 67.8 4.7 0.00016 32.2 3.9 29 271-306 31-59 (148)
49 3s8i_A Protein DDI1 homolog 1; 67.4 4.3 0.00015 32.7 3.5 29 271-306 29-57 (148)
50 3sqf_A Protease; folded monome 66.5 5.9 0.0002 30.3 3.9 31 85-117 10-40 (114)
51 3slz_A GAG-Pro-POL polyprotein 62.7 10 0.00034 29.9 4.7 31 83-115 21-51 (132)
52 2rsp_A RSV protease; hydrolase 53.3 15 0.0005 28.6 4.1 25 91-117 27-51 (124)
53 1bxo_A Protein (penicillopepsi 52.9 17 0.00058 33.0 5.3 44 250-303 3-46 (323)
54 1izd_A Aspartic proteinase; su 49.4 21 0.00071 32.5 5.3 44 251-304 4-47 (323)
55 1ibq_A Aspergillopepsin; aspar 49.1 18 0.00063 32.8 4.9 43 251-303 3-45 (325)
56 3ka2_A [L-Ala51;Gly51']HIV-1 p 48.8 16 0.00056 30.9 4.0 31 83-115 7-37 (203)
57 1b5f_A Protein (cardosin A); h 39.1 35 0.0012 29.4 4.9 39 74-114 181-227 (239)
58 3aup_A SBG7S, BG, basic 7S glo 36.9 35 0.0012 32.0 4.9 41 72-114 217-276 (403)
59 1mpp_A Pepsin; hydrolase(acid 36.6 36 0.0012 31.3 4.8 45 250-302 4-50 (361)
60 1oew_A Endothiapepsin; hydrola 36.3 42 0.0014 30.4 5.2 45 251-303 3-48 (329)
61 3c9x_A Trichoderma reesei aspa 35.0 45 0.0015 30.2 5.2 46 251-304 3-49 (329)
62 2apr_A Rhizopuspepsin; hydrola 32.8 51 0.0017 29.8 5.1 44 251-302 4-47 (325)
63 1lya_B Cathepsin D; lysosomal 32.4 67 0.0023 27.4 5.6 39 74-114 92-137 (241)
64 3ka2_A [L-Ala51;Gly51']HIV-1 p 29.4 66 0.0023 27.1 4.7 31 84-116 112-142 (203)
65 3cms_A Chymosin B; hydrolase, 28.8 36 0.0012 30.7 3.4 43 252-302 2-46 (323)
66 2x0b_A Renin; hydrolase-hormon 25.4 97 0.0033 28.8 5.7 39 74-114 235-280 (383)
67 1yg9_A Aspartic protease BLA G 24.9 43 0.0015 30.4 3.1 40 74-115 186-231 (330)
68 1qdm_A Prophytepsin; aspartic 24.6 76 0.0026 30.6 4.9 39 74-114 224-270 (478)
69 1miq_A Plasmepsin; aspartic pr 23.7 99 0.0034 28.6 5.4 39 74-114 232-273 (375)
70 3qvc_A Histo-aspartic protease 23.5 79 0.0027 30.2 4.8 40 74-115 307-349 (451)
71 1am5_A Pepsin, acid proteinase 21.7 1.4E+02 0.0048 26.7 5.9 43 72-116 179-227 (324)
72 3psg_A Pepsinogen; hydrolase(a 21.6 1.3E+02 0.0044 27.7 5.7 42 72-115 223-271 (370)
73 1htr_B Gastricsin; aspartyl pr 20.6 1.5E+02 0.0051 26.5 5.9 40 74-115 182-229 (329)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.2e-69 Score=522.84 Aligned_cols=347 Identities=32% Similarity=0.591 Sum_probs=300.6
Q ss_pred eEEEeeeeecCchhhhHHhhhhhhhhhccCCcccccccccCCC---CcceeeceecCCceEEEEEEEcCCCceEEEEecc
Q 016295 28 LRRIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVRHRLGDS---DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDT 104 (392)
Q Consensus 28 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DT 104 (392)
++||||+|.++.|+.+.+++.++++++ .|++++..++... ....+||.|+.|.+|+++|+||||||+|.|+|||
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DT 77 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDFLK---THKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDT 77 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHH---HCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEET
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHHHh---hhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEEeC
Confidence 479999999999999999998888876 3344444333211 3567999999999999999999999999999999
Q ss_pred CCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceEEEEEEeeEEEEceEEecCeEEEEEEEeCCccc
Q 016295 105 GSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTF 184 (392)
Q Consensus 105 GSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~ 184 (392)
||+++||++..|. +..|..++.|++++|+||+..++.|.+.|++|++.|.++.|+|++|+.++++|.||++....+..|
T Consensus 78 GSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~ 156 (370)
T 3psg_A 78 GSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFL 156 (370)
T ss_dssp TCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGG
T ss_pred CCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccccc
Confidence 9999999999996 668999999999999999999999999999999999999999999999999999999998776567
Q ss_pred ccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCCCCCCceEEeCccCCCCccCceEEEeccccCce
Q 016295 185 LLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYW 264 (392)
Q Consensus 185 ~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w 264 (392)
....++||||||++..+....+|++++|++||+|++++||+||++.. ..+|+|+|||+|+++|.|+++|+|+.++++|
T Consensus 157 ~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w 234 (370)
T 3psg_A 157 YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYW 234 (370)
T ss_dssp GGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTE
T ss_pred ccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeeccccccee
Confidence 77789999999999988878889999999999999999999999862 3489999999999999999999999999999
Q ss_pred EEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCCC----ceEEEecCc------cccccCceeeee
Q 016295 265 QFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE----GVVSAECKL------VVSQYGDLIWDL 334 (392)
Q Consensus 265 ~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~----~~~~v~C~~------~~~~fg~~~~~v 334 (392)
.|.+++|+|+++.+. +..++.+++||||+++++|.+++++|.+++++. |.|.+||+. +.|.|||..++|
T Consensus 235 ~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~~~~lP~i~f~~~g~~~~l 313 (370)
T 3psg_A 235 QITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQYPL 313 (370)
T ss_dssp EEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEEEE
T ss_pred EEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCCcccCCcEEEEECCEEEEE
Confidence 999999999998764 667899999999999999999999999999985 789999985 466899999999
Q ss_pred eecCcCccccccccCeeeeCCccccc---CC-cchhHHHHHHHhhcceEEEEecCCccc
Q 016295 335 LVSGLLPEKVCQQIGLCAFNGAEYVR---LG-IPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 335 ~~~~~~~~~~~~~~~~C~~~~~~~~~---~~-~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
|++++... ..+.|..+...... .+ .+ +||+.|||++|+|||+||+|-
T Consensus 314 ~~~~yi~~----~~~~C~~~~~~~~~~~~~~~~~----ILG~~Fl~~~y~vfD~~~~ri 364 (370)
T 3psg_A 314 SPSAYILQ----DDDSCTSGFEGMDVPTSSGELW----ILGDVFIRQYYTVFDRANNKV 364 (370)
T ss_dssp CHHHHEEE----CSSCEEESEEEECCCTTSCCEE----EECHHHHTTEEEEEETTTTEE
T ss_pred CHHHhccc----CCCEEEEEEEeCCCCCCCCCcE----EeChHHhcceEEEEECCCCEE
Confidence 99998655 34679656554221 12 24 455566999999999999883
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.5e-67 Score=509.48 Aligned_cols=353 Identities=33% Similarity=0.617 Sum_probs=272.0
Q ss_pred CceEEEeeeeecCchhhhHHhhh-hhhhhhccCCccc--ccccccCCCCcceeeceecCCceEEEEEEEcCCCceEEEEe
Q 016295 26 NGLRRIGLKKRRLDLHSLNAARI-TRKERYMGGAGVS--GVRHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIF 102 (392)
Q Consensus 26 ~~~~~ipl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~ 102 (392)
++++||||+|+++.|+.+.+.+. +++.++ .+.. +...+. .....+||.|+.+.+|+++|+||||||+|.|+|
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~ 80 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMARLGP---EWSQPMKRLTLG--NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVF 80 (383)
T ss_dssp --------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHHHHH---hhcccccccccc--CCcceEeeeecCCCEEEEEEEECCCCcEEEEEE
Confidence 34789999999998888777665 443332 1111 110111 134569999999999999999999999999999
Q ss_pred ccCCCceEEeCCCCCC-CcccCcCccccCCCCCceeecCCEEEEEcCcceEEEEEEeeEEEEceEEecCeEEEEEEEeCC
Q 016295 103 DTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGS 181 (392)
Q Consensus 103 DTGSs~~wv~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~ 181 (392)
||||+++||++..|.. +..|..|+.|+|++|+||+..++.|.+.|++|++.|.+++|+|++|+.+++ |.||++....+
T Consensus 81 DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g 159 (383)
T 2x0b_A 81 DTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPA 159 (383)
T ss_dssp ETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCH
T ss_pred eCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCC
Confidence 9999999999999962 358999999999999999999999999999999999999999999999999 99999998765
Q ss_pred cccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCCC--CCCceEEeCccCCCCccCceEEEecc
Q 016295 182 LTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA--EEGGEIVFGGVDPKHFKGKHTYVPVT 259 (392)
Q Consensus 182 ~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~--~~~G~l~fGgid~~~~~g~l~~~p~~ 259 (392)
..|....++||||||++.++.....|++++|++||+|++++||+||++..+. ..+|+|+|||+|+++|+|+++|+|+.
T Consensus 160 ~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~ 239 (383)
T 2x0b_A 160 LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI 239 (383)
T ss_dssp HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS
T ss_pred cccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC
Confidence 5566778899999999998877788999999999999999999999986432 14899999999999999999999999
Q ss_pred ccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCCC---ceEEEecCc------cccccCce
Q 016295 260 KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE---GVVSAECKL------VVSQYGDL 330 (392)
Q Consensus 260 ~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~---~~~~v~C~~------~~~~fg~~ 330 (392)
+.+||.|.+++|.|+++.+. +..++.+|+||||+++++|.+++++|.+++++. +.|.+||+. +.|.|||.
T Consensus 240 ~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~g~~~v~C~~~~~~P~i~f~~~g~ 318 (383)
T 2x0b_A 240 KTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGGK 318 (383)
T ss_dssp STTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGTTTCCCEEEEETTE
T ss_pred CCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcccCCcEEEeccccccCceEEEEECCE
Confidence 99999999999999998753 667899999999999999999999999999974 789999985 56689999
Q ss_pred eeeeeecCcCccccccccCeeeeCCcccc----cCCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 331 IWDLLVSGLLPEKVCQQIGLCAFNGAEYV----RLGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 331 ~~~v~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
.++||++++.......+.+.|.+++.... ....++ +|+.|||++|+|||+||+|.
T Consensus 319 ~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~I----LGd~Fl~~~y~vfD~~~~rI 377 (383)
T 2x0b_A 319 EYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWA----LGATFIRKFYTEFDRRNNRI 377 (383)
T ss_dssp EEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEE----ECHHHHTTEEEEEETTTTEE
T ss_pred EEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEE----EChHHhcceEEEEECCCCEE
Confidence 99999999865532223468955554322 123344 55556999999999999883
No 3
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.4e-63 Score=495.81 Aligned_cols=353 Identities=54% Similarity=0.926 Sum_probs=287.5
Q ss_pred EEEeeeeecCchhhhHHhhhhhhhhhccCCcccccccccC-CCCcceeeceecCCceEEEEEEEcCCCceEEEEeccCCC
Q 016295 29 RRIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVRHRLG-DSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSS 107 (392)
Q Consensus 29 ~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs 107 (392)
+||||+|++..++.+.+.+......+ +..+++ ...+ .+....+||.|+.+.+|+++|+||||||+|.|+|||||+
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs 76 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQ-PLLSGA---NPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSS 76 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC--------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CeeeeeeccchHHHHHhcchhhhhHH-HHHhhc---ccccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCc
Confidence 48999999999988876552211110 000111 1111 124567999999999999999999999999999999999
Q ss_pred ceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceEEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccc
Q 016295 108 NLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLA 187 (392)
Q Consensus 108 ~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~ 187 (392)
++||++..|..+..|..++.|+|++|+||+..++.|.+.|++|++.|.+++|+|++|+.++++|.||++....+..|...
T Consensus 77 ~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~ 156 (478)
T 1qdm_A 77 NLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVA 156 (478)
T ss_dssp CCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHC
T ss_pred ceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccc
Confidence 99999999965568999999999999999999999999999999999999999999999999999999998765556667
Q ss_pred cceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEE
Q 016295 188 RFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFE 267 (392)
Q Consensus 188 ~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~ 267 (392)
.++||||||++.++.....|++++|++||+|++++||+||++..+...+|+|+|||+|+++|.|+++|+|+.+.+||.|.
T Consensus 157 ~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~ 236 (478)
T 1qdm_A 157 KFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFD 236 (478)
T ss_dssp SSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEE
T ss_pred cccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEE
Confidence 78999999999988777788999999999999999999999864334589999999999999999999999999999999
Q ss_pred eceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCCC----------------------------------
Q 016295 268 LGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE---------------------------------- 313 (392)
Q Consensus 268 ~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~---------------------------------- 313 (392)
+++|.|+++.+.++..++.+|+||||+++++|.+++++|.++|++.
T Consensus 237 l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~ 316 (478)
T 1qdm_A 237 MGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQ 316 (478)
T ss_dssp ECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHH
T ss_pred EeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcc
Confidence 9999999988766667889999999999999999999999998752
Q ss_pred --------------------------------------------------------------------------ceEEEe
Q 016295 314 --------------------------------------------------------------------------GVVSAE 319 (392)
Q Consensus 314 --------------------------------------------------------------------------~~~~v~ 319 (392)
|.|.+|
T Consensus 317 iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~ 396 (478)
T 1qdm_A 317 VGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVD 396 (478)
T ss_dssp TTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEEC
T ss_pred ccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEee
Confidence 458899
Q ss_pred cCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccc----cCCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 320 CKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYV----RLGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 320 C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
|+. +.+.|||..++++++++...........|..+..... ....+++ |+.|||++|+|||+||+|-
T Consensus 397 C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~IL----Gd~fl~~~y~vfD~~~~rI 472 (478)
T 1qdm_A 397 CGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWIL----GDVFMGPYHTVFDYGKLRI 472 (478)
T ss_dssp GGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEE----CHHHHTTEEEEEETTTTEE
T ss_pred cccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEE----CHHHhccEEEEEECCCCEE
Confidence 984 4568999999999999864422222458965444221 1223444 5555999999999999883
No 4
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.1e-61 Score=461.23 Aligned_cols=303 Identities=37% Similarity=0.673 Sum_probs=265.5
Q ss_pred eeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceEE
Q 016295 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~ 153 (392)
.+||+|+.|.+|+++|+||||||++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47999999999999999999999999999999999999999996 56899999999999999999999999999999999
Q ss_pred EEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCCC
Q 016295 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (392)
Q Consensus 154 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 233 (392)
|.+++|+|++|+.+++++.||++....+..|....++||||||++..+.....+++++|++||+|++++||+||++.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987765566667899999999998887788999999999999999999999985
Q ss_pred CCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCCC
Q 016295 234 EEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 313 (392)
Q Consensus 234 ~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~ 313 (392)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +.....++|||||+++++|.+++++|++++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998774 446789999999999999999999999999874
Q ss_pred ----ceEEEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHhhcceEEEEe
Q 016295 314 ----GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNVRLAMQLVYS 383 (392)
Q Consensus 314 ----~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~lr~~y~VfD 383 (392)
+.|.+||+. +.+.||+..++||++++... +.+.|.+++........++ ||..|||++|+|||
T Consensus 237 ~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~~i~~~~~~~~~i----lG~~fl~~~y~vfD 308 (320)
T 4aa9_A 237 ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTSGFQGDNNSELWI----LGDVFIREYYSVFD 308 (320)
T ss_dssp ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEETTCCCEE----ECHHHHTTEEEEEE
T ss_pred ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEEEEEcCCCCCcEE----EChHHhcceEEEEE
Confidence 889999985 45689999999999998743 4578966665532223344 55566999999999
Q ss_pred cCCccc
Q 016295 384 LGSCRQ 389 (392)
Q Consensus 384 ~e~~R~ 389 (392)
+|++|.
T Consensus 309 ~~~~~i 314 (320)
T 4aa9_A 309 RANNRV 314 (320)
T ss_dssp TTTTEE
T ss_pred CCCCEE
Confidence 999873
No 5
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=3.3e-61 Score=458.26 Aligned_cols=305 Identities=35% Similarity=0.658 Sum_probs=269.5
Q ss_pred cceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcce
Q 016295 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (392)
Q Consensus 72 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~ 151 (392)
...+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568999999999999999999999999999999
Q ss_pred EEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCC
Q 016295 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (392)
Q Consensus 152 ~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~ 231 (392)
+.|.+++|+|++|+.+++++.||++....+..|.....+||||||++..+....++++++|++||.|++++||+||++..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876545555678999999999988878889999999999999999999998863
Q ss_pred CCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhC
Q 016295 232 DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 311 (392)
Q Consensus 232 ~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~ 311 (392)
. .|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +..+..+++||||+++++|.+++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 49999999999999999999999999999999999999998764 4567899999999999999999999999998
Q ss_pred CC----ceEEEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHhhcceEEE
Q 016295 312 GE----GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNVRLAMQLV 381 (392)
Q Consensus 312 ~~----~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~lr~~y~V 381 (392)
+. +.|.+||+. +.+.|||..++||++++... ..+.|.+++........++ +|..|||++|+|
T Consensus 238 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~~~~~~~~~i----LG~~fl~~~y~v 309 (323)
T 3cms_A 238 ATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQSENHSQKWI----LGDVFIREYYSV 309 (323)
T ss_dssp CEEETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEC---CCEE----ECHHHHTTEEEE
T ss_pred CeecCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEEeCCCCCcEE----ECHHHhhceEEE
Confidence 75 789999984 56689999999999998654 3578965555432233444 555569999999
Q ss_pred EecCCccc
Q 016295 382 YSLGSCRQ 389 (392)
Q Consensus 382 fD~e~~R~ 389 (392)
||+||+|.
T Consensus 310 fD~~~~~i 317 (323)
T 3cms_A 310 FDRANNLV 317 (323)
T ss_dssp EETTTTEE
T ss_pred EECCCCEE
Confidence 99999884
No 6
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.6e-61 Score=464.01 Aligned_cols=312 Identities=36% Similarity=0.710 Sum_probs=271.3
Q ss_pred CcceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCC-CcccCcCccccCCCCCceeecCCEEEEEcCc
Q 016295 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGS 149 (392)
Q Consensus 71 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~ 149 (392)
+...+||+|+.|.+|+++|+||||||++.|++||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 566899999999999999999999999999999999999999999963 3479889999999999999999999999999
Q ss_pred ceEEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCC
Q 016295 150 GSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNR 229 (392)
Q Consensus 150 g~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~ 229 (392)
|++.|.+++|+|++|+.++ +|.||++.......|....++||||||++..+.....|++++|++||+|++++||+||++
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998765446667789999999998887778899999999999999999999998
Q ss_pred CC--CCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHH
Q 016295 230 DP--DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEIN 307 (392)
Q Consensus 230 ~~--~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~ 307 (392)
.. +....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +.....++|||||+++++|.+++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 223489999999999999999999999999999999999999998653 556789999999999999999999999
Q ss_pred HHhCCC----ceEEEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccc----cCCcchhHHHHHHH
Q 016295 308 HAIGGE----GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYV----RLGIPITRVLFVLN 373 (392)
Q Consensus 308 ~~i~~~----~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~g~~fg~~ 373 (392)
+++++. | |.+||+. +.+.||+..++||++++.......+.+.|.+++.... ....+ +||..
T Consensus 244 ~~~~~~~~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~----iLG~~ 318 (341)
T 3k1w_A 244 EALGAKKRLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTW----ALGAT 318 (341)
T ss_dssp HHHTCEECSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCE----EECHH
T ss_pred HHcCCeecCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeE----EEChH
Confidence 999875 6 9999985 4668999999999999865533334578965555421 12334 45666
Q ss_pred hhcceEEEEecCCccc
Q 016295 374 VRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 374 ~lr~~y~VfD~e~~R~ 389 (392)
|||++|+|||+|++|.
T Consensus 319 fl~~~y~vfD~~~~~i 334 (341)
T 3k1w_A 319 FIRKFYTEFDRRNNRI 334 (341)
T ss_dssp HHTTEEEEEETTTTEE
T ss_pred HhcceEEEEeCCCCEE
Confidence 6999999999999873
No 7
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.4e-61 Score=461.25 Aligned_cols=313 Identities=40% Similarity=0.708 Sum_probs=268.9
Q ss_pred CcceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcc
Q 016295 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (392)
Q Consensus 71 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 150 (392)
....+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 89 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTG 89 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSC
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCC
Confidence 34468999999999999999999999999999999999999999996 46899999999999999999999999999999
Q ss_pred eEEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCC
Q 016295 151 SISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRD 230 (392)
Q Consensus 151 ~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~ 230 (392)
++.|.+++|+|++|+.+++++.||++....+..|....++||||||++..+.....+++++|++||+|++++||+||++.
T Consensus 90 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~ 169 (351)
T 1tzs_A 90 SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSN 169 (351)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCC
T ss_pred CeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCC
Confidence 99999999999999999999999999877655566677899999999988877778999999999999999999999987
Q ss_pred CCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHh
Q 016295 231 PDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI 310 (392)
Q Consensus 231 ~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i 310 (392)
......|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +..+..+++||||+++++|.+++++|++++
T Consensus 170 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~ 248 (351)
T 1tzs_A 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAI 248 (351)
T ss_dssp C--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHh
Confidence 5433489999999999999999999999999999999999999998753 566789999999999999999999999999
Q ss_pred CCC---ceEEEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccc----cCCcchhHHHHHHHhhcc
Q 016295 311 GGE---GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYV----RLGIPITRVLFVLNVRLA 377 (392)
Q Consensus 311 ~~~---~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~g~~fg~~~lr~ 377 (392)
++. +.|.++|+. +.+.|||..++||++++.......+.+.|.+++.... ....++ +|..|||+
T Consensus 249 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~i----LG~~fl~~ 324 (351)
T 1tzs_A 249 GAAPVDGEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWI----LGDVFIRQ 324 (351)
T ss_dssp TCEECSSSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEE----ECHHHHHH
T ss_pred CCcccCCeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEE----EChHHhhh
Confidence 875 679999985 4568999999999999865432223468965555432 123344 55556999
Q ss_pred eEEEEecCCccc
Q 016295 378 MQLVYSLGSCRQ 389 (392)
Q Consensus 378 ~y~VfD~e~~R~ 389 (392)
+|+|||+|++|.
T Consensus 325 ~y~vfD~~~~ri 336 (351)
T 1tzs_A 325 FYSVFDRGNNRV 336 (351)
T ss_dssp EEEEEETTTTEE
T ss_pred eEEEEECCCCEE
Confidence 999999999873
No 8
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1e-60 Score=462.94 Aligned_cols=305 Identities=28% Similarity=0.512 Sum_probs=266.3
Q ss_pred CcceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcc
Q 016295 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (392)
Q Consensus 71 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 150 (392)
....+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 34568999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEeeEEEEceEEecCeEEEEEEEe---CCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEe
Q 016295 151 SISGFFSQDNVEVGDVVVKDQVFIEATRE---GSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWL 227 (392)
Q Consensus 151 ~~~G~~~~D~v~~g~~~~~~~~fg~~~~~---~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l 227 (392)
++.|.+++|+|++|+.++++ .||++... .. .|....++||||||++..+.....|++++|++||+|++++||+||
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L 206 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYL 206 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEEC
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEe
Confidence 99999999999999999999 99999982 22 455567899999999998877788999999999999999999999
Q ss_pred CCCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHH
Q 016295 228 NRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEIN 307 (392)
Q Consensus 228 ~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~ 307 (392)
.+.. ...|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.|+++.+ .++.+++||||+++++|.+++++|+
T Consensus 207 ~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l~ 279 (375)
T 1miq_A 207 PVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKFF 279 (375)
T ss_dssp CTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHHH
T ss_pred cCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHHH
Confidence 9863 258999999999999999999999999999999999 99999876 4578999999999999999999999
Q ss_pred HHhCCC-----ceEEEecCc-----cccccCceeeeeeecCcCccccccccCeeeeCCccccc-CCcchhHHHHHHHhhc
Q 016295 308 HAIGGE-----GVVSAECKL-----VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVR-LGIPITRVLFVLNVRL 376 (392)
Q Consensus 308 ~~i~~~-----~~~~v~C~~-----~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~-~~~~~~g~~fg~~~lr 376 (392)
+++++. +.|.++|+. +.+.|||..++||++++.......+...|.+++..... .+.++ ||..|||
T Consensus 280 ~~~~~~~~~~~g~~~~~C~~~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~I----LG~~fl~ 355 (375)
T 1miq_A 280 ANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFI----LGDPFMR 355 (375)
T ss_dssp HHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESEEECCSSSSEEE----ECHHHHH
T ss_pred HHhCCcccCCCCeEEEECCCCCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCcEE----ECHHHhc
Confidence 999883 779999985 56689999999999998654322234689666654332 13444 5555599
Q ss_pred ceEEEEecCCccc
Q 016295 377 AMQLVYSLGSCRQ 389 (392)
Q Consensus 377 ~~y~VfD~e~~R~ 389 (392)
++|+|||+|++|.
T Consensus 356 ~~yvvfD~~~~ri 368 (375)
T 1miq_A 356 KYFTVFDYDKESV 368 (375)
T ss_dssp HEEEEEETTTTEE
T ss_pred cEEEEEECCCCEE
Confidence 9999999999873
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.5e-60 Score=453.33 Aligned_cols=306 Identities=36% Similarity=0.695 Sum_probs=267.2
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceE
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSI 152 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~ 152 (392)
..+||+|+.+.+|+++|+||||||++.|+|||||+++||+++.|. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 468999999999999999999999999999999999999999996 4579889999999999999999999999999999
Q ss_pred EEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCC
Q 016295 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPD 232 (392)
Q Consensus 153 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~ 232 (392)
.|.+++|+|++|+.++++|.||++....+..|.....+||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998754345566789999999998877777889999999999999999999987532
Q ss_pred -CCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhC
Q 016295 233 -AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 311 (392)
Q Consensus 233 -~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~ 311 (392)
...+|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+. ..+..+++||||+++++|.+++++|+++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 23479999999999999999999999999999999999999998763 356799999999999999999999999998
Q ss_pred CC----ceEEEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccc----cCCcchhHHHHHHHhhcc
Q 016295 312 GE----GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYV----RLGIPITRVLFVLNVRLA 377 (392)
Q Consensus 312 ~~----~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~g~~fg~~~lr~ 377 (392)
+. +.|.+||+. +.+.|+|..++||++++.... .+.|.+++.... ....+ ++|..|||+
T Consensus 240 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~~~~~~~~~~----iLG~~fl~~ 311 (329)
T 1dpj_A 240 AKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEV----SGSCISAITPMDFPEPVGPLA----IVGDAFLRK 311 (329)
T ss_dssp CEECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEE----TTEEEECEEECCCCTTTCSEE----EECHHHHTT
T ss_pred CccCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecC----CCEEEEEEEecccCCCCCCcE----EEChHHhcc
Confidence 74 789999985 466899999999999986542 268965554321 12233 556666999
Q ss_pred eEEEEecCCccc
Q 016295 378 MQLVYSLGSCRQ 389 (392)
Q Consensus 378 ~y~VfD~e~~R~ 389 (392)
+|+|||+||+|.
T Consensus 312 ~y~vfD~~~~~i 323 (329)
T 1dpj_A 312 YYSIYDLGNNAV 323 (329)
T ss_dssp EEEEEETTTTEE
T ss_pred eEEEEECCCCEE
Confidence 999999999884
No 10
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.5e-60 Score=470.10 Aligned_cols=303 Identities=27% Similarity=0.441 Sum_probs=266.6
Q ss_pred CcceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcc
Q 016295 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (392)
Q Consensus 71 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 150 (392)
....+||.|+.+.+|+++|+||||||++.|++||||+++||++..|. +..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 56679999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEeeEEEEceEEecCeEEEEEEE----eCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEE
Q 016295 151 SISGFFSQDNVEVGDVVVKDQVFIEATR----EGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFW 226 (392)
Q Consensus 151 ~~~G~~~~D~v~~g~~~~~~~~fg~~~~----~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~ 226 (392)
++.|.++.|+|++|+.+++ |.||++.. .++ |....++||||||++..+.....|++++|++||+|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999988 443 5556789999999999887778899999999999999999999
Q ss_pred eCCCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHH
Q 016295 227 LNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEI 306 (392)
Q Consensus 227 l~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 306 (392)
|++.. ..+|+|+|||+|+++|.|+++|+|+.++++|.|.++ |.|+++ +.....+++||||+++++|++++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 248999999999999999999999999999999999 999998 34567999999999999999999999
Q ss_pred HHHhCCC-----ceEEEecC-----ccccccCceeeeeeecCcCccccccccCeeeeCCccccc-CCcchhHHHHHHHhh
Q 016295 307 NHAIGGE-----GVVSAECK-----LVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVR-LGIPITRVLFVLNVR 375 (392)
Q Consensus 307 ~~~i~~~-----~~~~v~C~-----~~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~-~~~~~~g~~fg~~~l 375 (392)
++++++. +.|.+||+ .+.+.|||..++||++++.......+.+.|.+++..... ...+ +||+.||
T Consensus 354 ~~~i~a~~~~~~g~y~v~C~~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~----ILG~~FL 429 (451)
T 3qvc_A 354 VESASVFKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTF----VLGDPFM 429 (451)
T ss_dssp HTTTTCEECTTSSCEEEETTCTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEECEEECCCSTTEE----EECHHHH
T ss_pred HHHcCCeecCCCCeEEeeCCcCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEEEEEeCCCCCCCE----EECHHHh
Confidence 9999874 88999998 356689999999999998654332345799666655332 2334 4556669
Q ss_pred cceEEEEecCCcc
Q 016295 376 LAMQLVYSLGSCR 388 (392)
Q Consensus 376 r~~y~VfD~e~~R 388 (392)
|++|+|||+|++|
T Consensus 430 r~~YvVfD~~n~r 442 (451)
T 3qvc_A 430 RKYFTVYDYDNHT 442 (451)
T ss_dssp HHEEEEEETTTTE
T ss_pred hcEEEEEECCCCE
Confidence 9999999999987
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.5e-60 Score=450.71 Aligned_cols=303 Identities=37% Similarity=0.646 Sum_probs=267.3
Q ss_pred eeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceEE
Q 016295 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~ 153 (392)
.+||+|+.+.+|+++|+||||||++.|+|||||+++||++..|. +..|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 58999999999999999999999999999999999999999996 56799899999999999999999999999999999
Q ss_pred EEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCCC
Q 016295 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (392)
Q Consensus 154 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 233 (392)
|.+++|+|++|+.+++++.||++....+..|.....+||||||++..+.....|++++|++||+|++++||+||++..
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-- 159 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG-- 159 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTT--
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCC--
Confidence 999999999999999999999999876655666778999999999888777788999999999999999999998863
Q ss_pred CCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCCC
Q 016295 234 EEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 313 (392)
Q Consensus 234 ~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~ 313 (392)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +.+ ..+++||||+++++|.+++++|++++++.
T Consensus 160 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 160 ANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp CSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred CCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998753 334 89999999999999999999999999874
Q ss_pred ---ceEEEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccc----cCCcchhHHHHHHHhhcceEE
Q 016295 314 ---GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYV----RLGIPITRVLFVLNVRLAMQL 380 (392)
Q Consensus 314 ---~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~g~~fg~~~lr~~y~ 380 (392)
+.|.++|+. +.+.|||..++||++++.... .+.|.+++.... ....++ +|..|||++|+
T Consensus 238 ~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~~~~~~~~~~i----lG~~fl~~~y~ 309 (324)
T 1am5_A 238 ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSGVPSNTSELWI----FGDVFLRNYYT 309 (324)
T ss_dssp ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECCSCCSSSCEEE----ECHHHHHHEEE
T ss_pred ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECccCCCCCCcEE----EChHHhccEEE
Confidence 779999985 466899999999999986553 578965555432 123344 55556999999
Q ss_pred EEecCCccc
Q 016295 381 VYSLGSCRQ 389 (392)
Q Consensus 381 VfD~e~~R~ 389 (392)
|||+||+|.
T Consensus 310 vfD~~~~~i 318 (324)
T 1am5_A 310 IYDRTNNKV 318 (324)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCEE
Confidence 999999873
No 12
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5.2e-60 Score=465.62 Aligned_cols=306 Identities=29% Similarity=0.494 Sum_probs=267.2
Q ss_pred CcceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcc
Q 016295 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (392)
Q Consensus 71 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 150 (392)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34579999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEeeEEEEceEEecCeEEEEEEEeC--CcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeC
Q 016295 151 SISGFFSQDNVEVGDVVVKDQVFIEATREG--SLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 228 (392)
Q Consensus 151 ~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~--~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~ 228 (392)
++.|.+++|+|++|+.+++ |.||++.... +..|....++||||||++..+....+|++++|++||+|++++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 444556678999999999988877889999999999999999999999
Q ss_pred CCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHH
Q 016295 229 RDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINH 308 (392)
Q Consensus 229 ~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~ 308 (392)
+.+ ..+|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.|++ .+ + .++.+|+||||+++++|.+++++|++
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999999999999999 99999 33 3 56789999999999999999999999
Q ss_pred HhCCC----c-eEEEecCc-----cccccCceeeeeeecCcCccccccccCeeeeCCccccc-CCcchhHHHHHHHhhcc
Q 016295 309 AIGGE----G-VVSAECKL-----VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVR-LGIPITRVLFVLNVRLA 377 (392)
Q Consensus 309 ~i~~~----~-~~~v~C~~-----~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~-~~~~~~g~~fg~~~lr~ 377 (392)
++++. | .|.+||+. +.+.|||..++||++++.......+...|.+++..... .+.++ +|..|||+
T Consensus 357 ~i~~~~~~~g~~~~v~C~~~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~I----LGd~Flr~ 432 (453)
T 2bju_A 357 NLDVIKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFI----LGDPFMRK 432 (453)
T ss_dssp TSSCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECEEECCCSSCEEE----ECHHHHHH
T ss_pred HhCCcccCCCceEEEecCCCCCCcEEEEECCEEEEECHHHhEeecccCCCceEEEEEEeCCCCCCCEE----ECHHHhhc
Confidence 99874 6 79999985 56689999999999998654321234689656554322 23444 45555899
Q ss_pred eEEEEecCCccc
Q 016295 378 MQLVYSLGSCRQ 389 (392)
Q Consensus 378 ~y~VfD~e~~R~ 389 (392)
+|+|||+|++|.
T Consensus 433 ~yvVFD~~n~rI 444 (453)
T 2bju_A 433 YFTVFDYDNHSV 444 (453)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEECCCCEE
Confidence 999999999873
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=4.6e-60 Score=451.55 Aligned_cols=306 Identities=38% Similarity=0.709 Sum_probs=267.6
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceE
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSI 152 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~ 152 (392)
..+||+ +.+.+|+++|+||||||++.|+|||||+++||++..|. +..|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~ 80 (329)
T 1htr_B 3 TYEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSL 80 (329)
T ss_dssp CCCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred ceeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCe
Confidence 347898 88999999999999999999999999999999999996 4579989999999999999999999999999999
Q ss_pred EEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCC
Q 016295 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPD 232 (392)
Q Consensus 153 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~ 232 (392)
.|.+++|+|++|+.+++++.||++....+..|.....+||||||++..+.....|++++|++||+|++++||+||++...
T Consensus 81 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~ 160 (329)
T 1htr_B 81 TGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG 160 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS
T ss_pred EEEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCC
Confidence 99999999999999999999999988765556667789999999999887778899999999999999999999988642
Q ss_pred CCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCC
Q 016295 233 AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 312 (392)
Q Consensus 233 ~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~ 312 (392)
. ..|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+..+..+..+++||||+++++|.+++++|.+++++
T Consensus 161 ~-~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~ 239 (329)
T 1htr_B 161 S-SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGA 239 (329)
T ss_dssp S-EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTC
T ss_pred C-CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCC
Confidence 2 379999999999999999999999999999999999999998764345678999999999999999999999999987
Q ss_pred C----ceEEEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccc---cCC--cchhHHHHHHHhhcc
Q 016295 313 E----GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYV---RLG--IPITRVLFVLNVRLA 377 (392)
Q Consensus 313 ~----~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~---~~~--~~~~g~~fg~~~lr~ 377 (392)
. +.|.++|+. +.+.|||..++||++++.... . +.|.+++.... ..+ .+ ++|..|||+
T Consensus 240 ~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~---~-g~C~~~~~~~~~~~~~~~~~~----iLG~~fl~~ 311 (329)
T 1htr_B 240 QEDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSN---N-GYCTVGVEPTYLSSQNGQPLW----ILGDVFLRS 311 (329)
T ss_dssp EECTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEC---S-SCEEESEEEECCCCTTSSCEE----EECHHHHTT
T ss_pred eecCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC---C-CEEEEEEEECCCCCCCCCceE----EEChHHhcc
Confidence 4 679999985 456899999999999986543 1 58965655432 112 34 455566999
Q ss_pred eEEEEecCCccc
Q 016295 378 MQLVYSLGSCRQ 389 (392)
Q Consensus 378 ~y~VfD~e~~R~ 389 (392)
+|+|||+||+|.
T Consensus 312 ~yvvfD~~~~~i 323 (329)
T 1htr_B 312 YYSVYDLGNNRV 323 (329)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEECCCCEE
Confidence 999999999873
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.4e-58 Score=446.86 Aligned_cols=309 Identities=26% Similarity=0.396 Sum_probs=267.2
Q ss_pred CcceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcc
Q 016295 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (392)
Q Consensus 71 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 150 (392)
....+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 45678999999999999999999999999999999999999999995345799899999999999999999999999999
Q ss_pred eEEEEEEeeEEEEceEEecCeEEEEEEEeCC-----cccccccceeeecCCccccccCC------CCChHHHHHHcCCCC
Q 016295 151 SISGFFSQDNVEVGDVVVKDQVFIEATREGS-----LTFLLARFDGIIGLGFREIAVGD------AVPVWDNMVEQGLVS 219 (392)
Q Consensus 151 ~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~-----~~~~~~~~~GilGLg~~~~s~~~------~~~~~~~l~~~g~i~ 219 (392)
++.|.+++|+|++|+.++++|.||++....+ ..|.....+||||||++..+... .++++++|++||+|+
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998765 34556678999999998876533 788999999999999
Q ss_pred CceEEEEeCCCCCCCCCceEEeCccCCCCccCceEEEeccccC----ceEEEeceEEEcceeeeeecCCeeEE-EeCCCC
Q 016295 220 EEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKG----YWQFELGDILIGNQSTGVCEGGCAAI-VDSGTS 294 (392)
Q Consensus 220 ~~~fs~~l~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~----~w~v~~~~i~v~~~~~~~~~~~~~ai-iDTGt~ 294 (392)
+++||+||.+. ...|.|+|||+|+++|.|+++|+|+.+.. +|.|.+++|.|+++.+. +..+..+| |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999885 23899999999999999999999998766 99999999999998764 34567899 999999
Q ss_pred CcccCHHHHHHHHHHhCCC-----ceEEEecCc-------ccccc--C-----ceeeeeeecCcCccccccccCeeeeCC
Q 016295 295 LLAGPTPVVTEINHAIGGE-----GVVSAECKL-------VVSQY--G-----DLIWDLLVSGLLPEKVCQQIGLCAFNG 355 (392)
Q Consensus 295 ~i~lP~~~~~~i~~~i~~~-----~~~~v~C~~-------~~~~f--g-----~~~~~v~~~~~~~~~~~~~~~~C~~~~ 355 (392)
++++|.+++++|++++++. +.|.++|+. +.+.| | +..++||++++..... .+...|.+++
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~-~~~~~C~~~i 320 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVD-KSGETCMFIV 320 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTCEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECS-SSSCEEEESE
T ss_pred ceeCCHHHHHHHHHHhCCcccCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecC-CCCCeeEEEE
Confidence 9999999999999999984 779999975 34578 8 8999999999865421 1346896666
Q ss_pred cccccCCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 356 AEYVRLGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 356 ~~~~~~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
... ....++ +|..|||++|+|||+||+|.
T Consensus 321 ~~~-~~~~~i----LG~~fl~~~yvvfD~~~~~i 349 (361)
T 1mpp_A 321 LPD-GGNQFI----VGNLFLRFFVNVYDFGKNRI 349 (361)
T ss_dssp EEE-SSSCCE----EEHHHHTTEEEEEETTTTEE
T ss_pred EeC-CCCCEE----EChHHhccEEEEEECCCCEE
Confidence 653 223344 55566999999999999873
No 15
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=8.3e-59 Score=442.77 Aligned_cols=303 Identities=25% Similarity=0.346 Sum_probs=264.7
Q ss_pred CcceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCccc--CcCccccCCCCCceeecCCEEEEEcC
Q 016295 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISC--YFHSRYKSRKSNTYTEIGKSCEINYG 148 (392)
Q Consensus 71 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C--~~~~~y~~~~Sst~~~~~~~~~~~Y~ 148 (392)
....+||.|+.+..|+++|+|| ||++.|+|||||+++||++..|. +..| ..++.|+|++| ||+..++.|.+.|+
T Consensus 5 ~~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg 80 (330)
T 1yg9_A 5 VPLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFD 80 (330)
T ss_dssp CCSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETT
T ss_pred eeeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEEC
Confidence 3445899999999999999999 89999999999999999999996 4679 88899999999 99999999999999
Q ss_pred cceEEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccc-cCCCCChHHHHHHcCCCCCceEEEEe
Q 016295 149 SGSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIA-VGDAVPVWDNMVEQGLVSEEVFSFWL 227 (392)
Q Consensus 149 ~g~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s-~~~~~~~~~~l~~~g~i~~~~fs~~l 227 (392)
+|++.|.+++|+|++|+.++++|.||++... +..|....++||||||++..+ ....++++++|++||+| +++||+||
T Consensus 81 ~Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l 158 (330)
T 1yg9_A 81 TGSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHH 158 (330)
T ss_dssp TEEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEE
T ss_pred CceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEE
Confidence 9999999999999999999999999999987 434656678999999999887 66778899999999999 99999999
Q ss_pred CCCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHH
Q 016295 228 NRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEIN 307 (392)
Q Consensus 228 ~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~ 307 (392)
++..+....|+|+|||+|+++|+|+++|+|+.+.++|.|.+++|.|+++.+. ..+..+|+||||+++++|++++++|+
T Consensus 159 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~ 236 (330)
T 1yg9_A 159 ARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPIN 236 (330)
T ss_dssp EECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHH
T ss_pred cCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHH
Confidence 8864333489999999999999999999999999999999999999998763 56789999999999999999999999
Q ss_pred HHhCCC----c--eE-EEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHh
Q 016295 308 HAIGGE----G--VV-SAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNV 374 (392)
Q Consensus 308 ~~i~~~----~--~~-~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~ 374 (392)
+++++. | .| .+||+. +.+.|||..++||++++.... .+.|.+++........++ +|..|
T Consensus 237 ~~~~~~~~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~C~~~i~~~~~~~~~i----lG~~f 308 (330)
T 1yg9_A 237 EAIGCVVEKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNLCYSGFQPCGHSDHFF----IGDFF 308 (330)
T ss_dssp HHHTCEEEECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTEEEESEEEETTCSSEE----ECHHH
T ss_pred HHhCCcccCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCcEEEEEEeCCCCCeEE----ecHHH
Confidence 999885 6 78 999985 456899999999999986553 578965555432223344 45556
Q ss_pred hcceEEEEecCCccc
Q 016295 375 RLAMQLVYSLGSCRQ 389 (392)
Q Consensus 375 lr~~y~VfD~e~~R~ 389 (392)
||++|+|||+||+|.
T Consensus 309 l~~~y~vfD~~~~ri 323 (330)
T 1yg9_A 309 VDHYYSEFNWENKTM 323 (330)
T ss_dssp HTTEEEEEETTTTEE
T ss_pred hhheEEEEECCCCEE
Confidence 999999999999884
No 16
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.9e-57 Score=433.30 Aligned_cols=298 Identities=28% Similarity=0.371 Sum_probs=252.4
Q ss_pred ecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceee-cCCEEEEEcCcce-EEEEE
Q 016295 79 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTE-IGKSCEINYGSGS-ISGFF 156 (392)
Q Consensus 79 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~-~~~~~~~~Y~~g~-~~G~~ 156 (392)
.+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 346889999999999999999999999999999999996 34567789999999999999 6899999999998 89999
Q ss_pred EeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCcccccc---CCCCChHHHHHHcCCCCCceEEEEeCCCCCC
Q 016295 157 SQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (392)
Q Consensus 157 ~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 233 (392)
++|+|++|+.++++|.||++....+..+.....+||||||++..+. ...++++++|+++ |++++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999998764333335789999999998765 3467899999987 8999999999874
Q ss_pred CCCceEEeCccCCCCccCceEEEecc-ccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHh-C
Q 016295 234 EEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI-G 311 (392)
Q Consensus 234 ~~~G~l~fGgid~~~~~g~l~~~p~~-~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~ 311 (392)
..|+|+|||+|+++|.|+++|+|+. +.++|.|.+++|.|+++.+ +..+..+||||||+++++|.+++++|++++ +
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 3899999999999999999999997 5789999999999999865 456789999999999999999999999999 5
Q ss_pred CC-----ceEEEecCc----cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHhhcceEEEE
Q 016295 312 GE-----GVVSAECKL----VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNVRLAMQLVY 382 (392)
Q Consensus 312 ~~-----~~~~v~C~~----~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~lr~~y~Vf 382 (392)
+. +.|.+||+. +.+.|||..++||++++.......+...|..++........++ +|..|||++|+||
T Consensus 242 a~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~I----LG~~fl~~~y~vf 317 (329)
T 3c9x_A 242 AQYDNQQEGVVFDCDEDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSSSGIGINI----FGDVALKAALVVF 317 (329)
T ss_dssp CEEETTTTEEEEETTCCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEECTTTTSEE----ECHHHHTTEEEEE
T ss_pred cEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcCCCCCcEE----EChHHhccEEEEE
Confidence 42 789999984 5568899999999998864432223478965555432233444 4555599999999
Q ss_pred ecCCccc
Q 016295 383 SLGSCRQ 389 (392)
Q Consensus 383 D~e~~R~ 389 (392)
|+||+|.
T Consensus 318 D~~~~ri 324 (329)
T 3c9x_A 318 DLGNERL 324 (329)
T ss_dssp ETTTTEE
T ss_pred ECCCCEE
Confidence 9999873
No 17
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=5.6e-57 Score=429.34 Aligned_cols=296 Identities=31% Similarity=0.573 Sum_probs=253.4
Q ss_pred ecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcce-EEEEEE
Q 016295 79 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFS 157 (392)
Q Consensus 79 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~-~~G~~~ 157 (392)
++.+.+|+++|+||||||++.|+|||||+++||+++.|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999744 778899999999999999999999999998 899999
Q ss_pred eeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCcccccc-CCCCChHHHHHHcCCCCCceEEEEeCCCCCCCCC
Q 016295 158 QDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV-GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (392)
Q Consensus 158 ~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~-~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~ 236 (392)
+|+|++++.++++|.||++..... .|.....+||||||++..+. ...++++++|++||+|++++||+||.+... ...
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAA-SFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKN-GGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECH-HHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGG-TCC
T ss_pred EEEEEECCEEECcEEEEEEeccCc-ccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCC-CCC
Confidence 999999999999999999998764 35555689999999998764 357789999999999999999999976421 248
Q ss_pred ceEEeCccCCCCccCceEEEecc-ccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCCC--
Q 016295 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE-- 313 (392)
Q Consensus 237 G~l~fGgid~~~~~g~l~~~p~~-~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~-- 313 (392)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+|++ .+ +.....++|||||+++++|.++++++.+++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~ 243 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGASDN 243 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcccC
Confidence 99999999999999999999996 4789999999999999 33 556789999999999999999999999998764
Q ss_pred --ceEEEecCc-----cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHhhcceEEEEecCC
Q 016295 314 --GVVSAECKL-----VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNVRLAMQLVYSLGS 386 (392)
Q Consensus 314 --~~~~v~C~~-----~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~lr~~y~VfD~e~ 386 (392)
+.|.+||+. +.+.|++..++||++++..... .+.|...+.... .+.++ +|..|||++|+|||+||
T Consensus 244 ~~g~~~~~C~~~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~-~~~~i----LG~~fl~~~y~vfD~~~ 315 (325)
T 2apr_A 244 GDGTYTISCDTSAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN-WGFAI----IGDTFLKNNYVVFNQGV 315 (325)
T ss_dssp SSSCEEECSCGGGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES-SSSEE----ECHHHHTTEEEEEETTT
T ss_pred CCCeEEEECCCCCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC-CCCEE----ECHHHhcceEEEEECCC
Confidence 679999985 3557888899999998854421 578955544322 33444 55556999999999999
Q ss_pred ccc
Q 016295 387 CRQ 389 (392)
Q Consensus 387 ~R~ 389 (392)
+|.
T Consensus 316 ~~i 318 (325)
T 2apr_A 316 PEV 318 (325)
T ss_dssp TEE
T ss_pred CEE
Confidence 883
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.5e-57 Score=431.45 Aligned_cols=295 Identities=26% Similarity=0.363 Sum_probs=249.3
Q ss_pred CCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceee-cCCEEEEEcCcce-EEEEEEe
Q 016295 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTE-IGKSCEINYGSGS-ISGFFSQ 158 (392)
Q Consensus 81 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~-~~~~~~~~Y~~g~-~~G~~~~ 158 (392)
.+.+|+++|+||||||++.|+|||||+++||+++.|. ...| .++.|+|++|+||+. .++.|.+.|++|+ +.|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5789999999999999999999999999999999997 3456 788999999999998 6889999999998 8999999
Q ss_pred eEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCcccccc---CCCCChHHHHHHcCCCCCceEEEEeCCCCCCCC
Q 016295 159 DNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEE 235 (392)
Q Consensus 159 D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~ 235 (392)
|+|++|+.++++|.||++....+..+.....+||||||++..+. ...++++++|++| |++++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999998765333335679999999998765 3467899999987 8999999999874 3
Q ss_pred CceEEeCccCCCCccCceEEEecc-ccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHh-CCC
Q 016295 236 GGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI-GGE 313 (392)
Q Consensus 236 ~G~l~fGgid~~~~~g~l~~~p~~-~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~~~ 313 (392)
.|+|+|||+|+++|.|+++|+|+. +.++|.|.+++|.|+++.+ +..+..+||||||+++++|.+++++|++++ ++.
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTF--KSTSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCC--EEEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeec--cCCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 899999999999999999999997 5789999999999999865 345678999999999999999999999999 542
Q ss_pred -----ceEEEecCc----cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHhhcceEEEEec
Q 016295 314 -----GVVSAECKL----VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNVRLAMQLVYSL 384 (392)
Q Consensus 314 -----~~~~v~C~~----~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~lr~~y~VfD~ 384 (392)
+.|.+||+. +.+.|||..++||++++.......+.+.|..++........+++ |..|||++|+|||+
T Consensus 243 ~~~~~g~~~~~C~~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~iL----G~~fl~~~y~vfD~ 318 (329)
T 1oew_A 243 SSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIF----GDVALKAAFVVFNG 318 (329)
T ss_dssp EETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEESTTTSSEEE----CHHHHTTEEEEEEC
T ss_pred EcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCCCCCceEE----ChHHhcCEEEEEEC
Confidence 789999985 45688999999999988544322334789655544322334445 55559999999999
Q ss_pred -CCccc
Q 016295 385 -GSCRQ 389 (392)
Q Consensus 385 -e~~R~ 389 (392)
||+|.
T Consensus 319 ~~~~ri 324 (329)
T 1oew_A 319 ATTPTL 324 (329)
T ss_dssp SSSCEE
T ss_pred CCCceE
Confidence 99873
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.8e-56 Score=428.53 Aligned_cols=294 Identities=25% Similarity=0.416 Sum_probs=256.3
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCC--CCCCcccCcCccccCCCCCceeecCCEEEEEcCcc
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK--CYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~--C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 150 (392)
..+||.+. +..|+++|+||||||++.|+|||||+++||+++. |..+..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 35788885 6789999999999999999999999999999775 76556899999999999999999999999999999
Q ss_pred -eEEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCcccccc----------CCCCChHHHHHHcCCCC
Q 016295 151 -SISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV----------GDAVPVWDNMVEQGLVS 219 (392)
Q Consensus 151 -~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~----------~~~~~~~~~l~~~g~i~ 219 (392)
.+.|.+++|+|++|+.+++++.||++..... .+||||||++..+. ...++++++|++||+|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999998754 49999999998753 23556999999999999
Q ss_pred CceEEEEeCCCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccC
Q 016295 220 EEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGP 299 (392)
Q Consensus 220 ~~~fs~~l~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP 299 (392)
+++||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.. ...++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998763 23899999999999999999999999999999999999999988753 3689999999999999
Q ss_pred HHHHHHHHHHhCCC--------ceEEEecCc-----cccccC-ceeeeeeecCcCccccccccCeeeeCCcccccCCcch
Q 016295 300 TPVVTEINHAIGGE--------GVVSAECKL-----VVSQYG-DLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPI 365 (392)
Q Consensus 300 ~~~~~~i~~~i~~~--------~~~~v~C~~-----~~~~fg-~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~ 365 (392)
.+++++|++++++. +.|.+||+. +.++|+ +..++||++++.... +.+.|.+++.. .+.
T Consensus 230 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~p~i~f~f~~g~~~~v~~~~~~~~~---~~~~C~~~i~~---~~~-- 301 (339)
T 3fv3_A 230 SDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEYVYQN---GDGTCLWGIQP---SDD-- 301 (339)
T ss_dssp HHHHHHHHHHHTCEEEEEETTEEEEEECTTCCCCSEEEEEETTSCEEEEEGGGGEEEC---SSSCEEESEEE---CSS--
T ss_pred HHHHHHHHHHcCCEEccccccCceEEEecCCCCCCcEEEEECCCCEEEECHHHheeeC---CCCeEEEEEEe---CCc--
Confidence 99999999999863 668999987 456884 899999999986542 45789776665 233
Q ss_pred hHHHHHHHhhcceEEEEecCCccc
Q 016295 366 TRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 366 ~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
++||..|||++|+|||+|++|.
T Consensus 302 --~ilG~~fl~~~y~vfD~~~~~i 323 (339)
T 3fv3_A 302 --TILGDNFLRHAYLLYNLDANTI 323 (339)
T ss_dssp --CEECHHHHTTEEEEEETTTTEE
T ss_pred --EEeChHHHhCEEEEEECCCCEE
Confidence 4556666999999999999873
No 20
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=4.1e-56 Score=426.51 Aligned_cols=297 Identities=28% Similarity=0.446 Sum_probs=254.2
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCC--CCCC------CcccCcCccccCCCCCceeecCCEEE
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS--KCYF------SISCYFHSRYKSRKSNTYTEIGKSCE 144 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~--~C~~------~~~C~~~~~y~~~~Sst~~~~~~~~~ 144 (392)
..+||.| .+.+|+++|+||||||++.|+|||||+++||+++ .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4678888 5789999999999999999999999999999976 6752 34798899999999999999999999
Q ss_pred EEcCcce-EEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccC--CCCChHHHHHHcCCCCCc
Q 016295 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEE 221 (392)
Q Consensus 145 ~~Y~~g~-~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~ 221 (392)
+.|++|+ +.|.+++|+|++|+.+++++.||++.... ..+||||||++..+.. ...+++.+|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998764 3599999999877542 356799999999999999
Q ss_pred eEEEEeCCCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHH
Q 016295 222 VFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (392)
Q Consensus 222 ~fs~~l~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~ 301 (392)
+||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.. +..++|||||+++++|.+
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA---NTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC---CcCEEEeCCCCCEEcCHH
Confidence 9999998752 34899999999999999999999999989999999999999987742 468999999999999999
Q ss_pred HHHHHHHHhCCC--------ceEEEecCc---ccccc-CceeeeeeecCcCcccc---ccccCeeeeCCcccccCCcchh
Q 016295 302 VVTEINHAIGGE--------GVVSAECKL---VVSQY-GDLIWDLLVSGLLPEKV---CQQIGLCAFNGAEYVRLGIPIT 366 (392)
Q Consensus 302 ~~~~i~~~i~~~--------~~~~v~C~~---~~~~f-g~~~~~v~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~ 366 (392)
++++|++++++. +.|.+||+. +.+.| ||..++||++++..... ......|.+++... +.
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~---~~--- 303 (342)
T 2qzx_A 230 IVRNILYAIGAQMKFDSAGNKVYVADCKTSGTIDFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES---ED--- 303 (342)
T ss_dssp HHHHHHHHHTCEEEECTTSCEEEEECTTCCCEEEEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC---SS---
T ss_pred HHHHHHHHhCCeeeeccCCCcEEEEECCCCCcEEEEECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC---CC---
Confidence 999999999873 379999985 56678 78999999999854421 12236896655432 22
Q ss_pred HHHHHHHhhcceEEEEecCCccc
Q 016295 367 RVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 367 g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
+++|..|||++|+|||+||+|.
T Consensus 304 -~iLG~~fl~~~y~vfD~~~~~i 325 (342)
T 2qzx_A 304 -NILGDNFLRSAYVVYNLDDKKI 325 (342)
T ss_dssp -CEECHHHHTTEEEEEETTTTEE
T ss_pred -cEeChHhhhcEEEEEECCCCEE
Confidence 4566677999999999999873
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=8.9e-56 Score=424.29 Aligned_cols=298 Identities=26% Similarity=0.441 Sum_probs=253.2
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCC--CC------CCcccCcCccccCCCCCceeecCCEEE
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK--CY------FSISCYFHSRYKSRKSNTYTEIGKSCE 144 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~--C~------~~~~C~~~~~y~~~~Sst~~~~~~~~~ 144 (392)
..+||.+. +.+|+++|+||||||++.|++||||+++||+++. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45788874 7889999999999999999999999999999765 73 245898899999999999999999999
Q ss_pred EEcCcce-EEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccC-CCCChHHHHHHcCCCCCce
Q 016295 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG-DAVPVWDNMVEQGLVSEEV 222 (392)
Q Consensus 145 ~~Y~~g~-~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~-~~~~~~~~l~~~g~i~~~~ 222 (392)
+.|++|+ +.|.+++|+|++|+.+++++.||++.... ..+||||||++..+.. ..++++++|++||+|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998764 3599999999886543 3567999999999999999
Q ss_pred EEEEeCCCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHH
Q 016295 223 FSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPV 302 (392)
Q Consensus 223 fs~~l~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 302 (392)
||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.. .+..++|||||+++++|.++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23899999999999999999999999999999999999999998743 34789999999999999999
Q ss_pred HHHHHHHhCCC--------ceEEEecCc---cccccC-ceeeeeeecCcCccccccc---cCeeeeCCcccccCCcchhH
Q 016295 303 VTEINHAIGGE--------GVVSAECKL---VVSQYG-DLIWDLLVSGLLPEKVCQQ---IGLCAFNGAEYVRLGIPITR 367 (392)
Q Consensus 303 ~~~i~~~i~~~--------~~~~v~C~~---~~~~fg-~~~~~v~~~~~~~~~~~~~---~~~C~~~~~~~~~~~~~~~g 367 (392)
+++|++++++. +.|.+||++ +.+.|+ +..++||++++........ .+.|.+++... +.+
T Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~---~~~--- 304 (342)
T 3pvk_A 231 ADQIIKAFNGKLTQDSNGNSFYEVDCNLSGDVVFNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDVN---DAN--- 304 (342)
T ss_dssp HHHHHHHTTCEEEECTTSCEEEEECSCCCSEEEEEESTTCEEEEEGGGGEEC----------CEEESEEEC---TTC---
T ss_pred HHHHHHHcCCeecccCCCceEEEEecCCCCceEEEECCCCEEEEcHHHheeeccccCCCcCCeeEEEEeeC---CCe---
Confidence 99999999874 249999996 456887 7899999999864422112 26896665542 333
Q ss_pred HHHHHHhhcceEEEEecCCccc
Q 016295 368 VLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 368 ~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
+||..|||++|+|||+|++|-
T Consensus 305 -ilG~~fl~~~y~vfD~~~~~i 325 (342)
T 3pvk_A 305 -ILGDNFLRSAYIVYDLDDNEI 325 (342)
T ss_dssp -EECHHHHTTEEEEEETTTTEE
T ss_pred -EeCHHHHhcEEEEEECCCCEE
Confidence 566667999999999999873
No 22
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-55 Score=421.17 Aligned_cols=295 Identities=25% Similarity=0.430 Sum_probs=254.0
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCC--CCCC------CcccCcCccccCCCCCceeecCCEEE
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS--KCYF------SISCYFHSRYKSRKSNTYTEIGKSCE 144 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~--~C~~------~~~C~~~~~y~~~~Sst~~~~~~~~~ 144 (392)
..+||.+. +.+|+++|+||||||++.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 46788886 789999999999999999999999999999976 6753 24798899999999999999999999
Q ss_pred EEcCcce-EEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccC--CCCChHHHHHHcCCCCCc
Q 016295 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEE 221 (392)
Q Consensus 145 ~~Y~~g~-~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~ 221 (392)
+.|++|+ +.|.+++|+|++|+.++++|.||++.... ..+||||||++..+.. ...+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998763 3699999999877542 456799999999999999
Q ss_pred eEEEEeCCCCCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHH
Q 016295 222 VFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 301 (392)
Q Consensus 222 ~fs~~l~~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~ 301 (392)
+||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+. .+..+++||||+++++|.+
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 3489999999999999999999999999999999999999998774 2468999999999999999
Q ss_pred HHHHHHHHhCCC-----ceEE-EecCc---ccccc-CceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHH
Q 016295 302 VVTEINHAIGGE-----GVVS-AECKL---VVSQY-GDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFV 371 (392)
Q Consensus 302 ~~~~i~~~i~~~-----~~~~-v~C~~---~~~~f-g~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg 371 (392)
++++|++++++. +.|. +||+. +.+.| ||..++||++++.... .+...|.+++... +. +++|
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~i~~~~y~~~~--~~~~~C~~~i~~~---~~----~iLG 300 (334)
T 1j71_A 230 TADKFARIVGATWDSRNEIYRLPSCDLSGDAVFNFDQGVKITVPLSELILKD--SDSSICYFGISRN---DA----NILG 300 (334)
T ss_dssp HHHHHHHHHTCEEETTTTEEECSSSCCCSEEEEEESTTCEEEEEGGGGEEEC--SSSSCEEESEEEC---TT----CEEC
T ss_pred HHHHHHHHcCCcccCCCceEEEEcCCCCCceEEEEcCCcEEEECHHHheeec--CCCCeeEEEEeEC---CC----cEEC
Confidence 999999999874 4788 99985 56688 7899999999986542 1223596655432 22 4566
Q ss_pred HHhhcceEEEEecCCccc
Q 016295 372 LNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 372 ~~~lr~~y~VfD~e~~R~ 389 (392)
..|||++|+|||+||+|.
T Consensus 301 ~~fl~~~y~vfD~~~~~i 318 (334)
T 1j71_A 301 DNFLRRAYIVYDLDDKTI 318 (334)
T ss_dssp HHHHTTEEEEEETTTTEE
T ss_pred hHhhccEEEEEECCCCEE
Confidence 777999999999999883
No 23
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-55 Score=418.37 Aligned_cols=293 Identities=26% Similarity=0.376 Sum_probs=248.7
Q ss_pred CCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcce-EEEEEEee
Q 016295 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFSQD 159 (392)
Q Consensus 81 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~-~~G~~~~D 159 (392)
.+.+|+++|+|| ||++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 578999999999 89999999999999999999996 3457788999999999 7778899999999998 89999999
Q ss_pred EEEEceEEecCeEEEEEEEeCCcccccccceeeecCCcccccc---CCCCChHHHHHHcCCCCCceEEEEeCCCCCCCCC
Q 016295 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (392)
Q Consensus 160 ~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~ 236 (392)
+|++|+.++++|.||++....+..+....++||||||++..+. ...++++++|++| |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998765333335789999999998775 3577899999987 8899999999874 28
Q ss_pred ceEEeCccCCCCccCceEEEecc-ccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHh-CCC-
Q 016295 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI-GGE- 313 (392)
Q Consensus 237 G~l~fGgid~~~~~g~l~~~p~~-~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~~~- 313 (392)
|+|+|||+|+++|.|+++|+|+. +.++|.|.+++|.|+++.+ +..+..+|+||||+++++|++++++|++++ ++.
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~ 239 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE 239 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999997 5789999999999999865 456789999999999999999999999999 553
Q ss_pred ----ceEEEecCc----cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHhhcceEEEEecC
Q 016295 314 ----GVVSAECKL----VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNVRLAMQLVYSLG 385 (392)
Q Consensus 314 ----~~~~v~C~~----~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~lr~~y~VfD~e 385 (392)
+.|.+||+. +.+.|||..++||++++.......+.+.|..++......+.++ +|..|||++|+|||+|
T Consensus 240 ~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~i----LG~~fl~~~y~vfD~~ 315 (325)
T 1ibq_A 240 SYEAGGYVFSCSTDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLGLSI----LGDVFLKSQYVVFNSE 315 (325)
T ss_dssp CSSSSSCEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECTTTCSEE----ECHHHHTTEEEEEETT
T ss_pred cCcCCeEEEEcCCCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCCCCCceE----EChHHhcCEEEEEECC
Confidence 678999975 4568899999999998854432223478966554432233444 5555699999999999
Q ss_pred Cccc
Q 016295 386 SCRQ 389 (392)
Q Consensus 386 ~~R~ 389 (392)
|+|.
T Consensus 316 ~~~i 319 (325)
T 1ibq_A 316 GPKL 319 (325)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 9883
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.6e-55 Score=417.43 Aligned_cols=296 Identities=26% Similarity=0.345 Sum_probs=250.0
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcce-
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS- 151 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~- 151 (392)
...|+. .+.+|+++|+|| ||++.|+|||||+++||+++.|. ...|..++.|+|++|+ ++..++.|.+.|++|+
T Consensus 7 ~~~~~~--~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~ 80 (323)
T 1izd_A 7 TTNPTS--NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSS 80 (323)
T ss_dssp EEEECG--GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCE
T ss_pred eeeEcC--CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCe
Confidence 344553 578999999999 79999999999999999999996 3467788999999999 7777899999999999
Q ss_pred EEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCcccccc---CCCCChHHHHHHcCCCCCceEEEEeC
Q 016295 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLN 228 (392)
Q Consensus 152 ~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~ 228 (392)
+.|.+++|+|++|+.++++|.||++....+..+.....+||||||++.++. ...++++++|++| |.+++||+||.
T Consensus 81 ~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~ 158 (323)
T 1izd_A 81 ASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALK 158 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECC
T ss_pred EEEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEcc
Confidence 899999999999999999999999998765333335679999999998775 3577899999988 89999999998
Q ss_pred CCCCCCCCceEEeCccCCCCccCceEEEecc-ccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHH
Q 016295 229 RDPDAEEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEIN 307 (392)
Q Consensus 229 ~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~-~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~ 307 (392)
+. ..|+|+|||+|+++|.|+++|+|+. +.++|.|.+++|.|++ .+ +..+..+|+||||+++++|++++++|+
T Consensus 159 ~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~ 231 (323)
T 1izd_A 159 HN----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYY 231 (323)
T ss_dssp TT----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHH
T ss_pred CC----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHH
Confidence 74 3899999999999999999999997 6789999999999999 44 567789999999999999999999999
Q ss_pred HHh-CCC-----ceEEEecCc----cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHhhcc
Q 016295 308 HAI-GGE-----GVVSAECKL----VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNVRLA 377 (392)
Q Consensus 308 ~~i-~~~-----~~~~v~C~~----~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~lr~ 377 (392)
+++ ++. +.|.+||++ +.+.|||..++||++++.... .+.+.|..++......+.++ +|..|||+
T Consensus 232 ~~i~ga~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~--~~~~~C~~~i~~~~~~~~~I----lG~~fl~~ 305 (323)
T 1izd_A 232 EQVNGASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFAD--VGNGQTFGGIQSNSGIGFSI----FGDVFLKS 305 (323)
T ss_dssp TTSTTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEE--CSTTEEEESEEECTTTSSEE----ECHHHHTT
T ss_pred HhCCCcEEcCcCCEEEEECCCCCceEEEEECCEEEecCHHHeEEec--CCCCeEEEEEEcCCCCCcEE----EChHHhcC
Confidence 999 442 789999985 456889999999999885442 23578965555432233444 55556999
Q ss_pred eEEEEecCCccc
Q 016295 378 MQLVYSLGSCRQ 389 (392)
Q Consensus 378 ~y~VfD~e~~R~ 389 (392)
+|+|||+||+|.
T Consensus 306 ~y~vfD~~~~ri 317 (323)
T 1izd_A 306 QYVVFDASGPRL 317 (323)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEECCCCEE
Confidence 999999999883
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.1e-55 Score=418.17 Aligned_cols=296 Identities=24% Similarity=0.345 Sum_probs=248.5
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcce-
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS- 151 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~- 151 (392)
...|+. .+.+|+++|+|| ||++.|+|||||+++||+++.|. ...|..++.|+|++|+ ++..++.|.+.|++|+
T Consensus 7 ~~~~~~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~ 80 (323)
T 1bxo_A 7 TNTPTA--NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSS 80 (323)
T ss_dssp EEEECG--GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCE
T ss_pred eeeecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCe
Confidence 344543 478999999999 89999999999999999999996 3467788999999999 7778899999999999
Q ss_pred EEEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCcccccc---CCCCChHHHHHHcCCCCCceEEEEeC
Q 016295 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLN 228 (392)
Q Consensus 152 ~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~ 228 (392)
+.|.+++|+|++|+.++++|.||++...++..+.....+||||||++..+. ...++++++|++| |++++||+||.
T Consensus 81 ~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~ 158 (323)
T 1bxo_A 81 ASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALK 158 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECC
T ss_pred EEEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEe
Confidence 899999999999999999999999998765333335679999999998765 2567899999988 89999999998
Q ss_pred CCCCCCCCceEEeCccCCCCccCceEEEecc-ccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHH
Q 016295 229 RDPDAEEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEIN 307 (392)
Q Consensus 229 ~~~~~~~~G~l~fGgid~~~~~g~l~~~p~~-~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~ 307 (392)
+. ..|+|+|||+|+++|+|+++|+|+. +.++|.|.+++|+|++ + +..++.+|+||||+++++|++++++|+
T Consensus 159 ~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~ 230 (323)
T 1bxo_A 159 HQ----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYY 230 (323)
T ss_dssp SS----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHH
T ss_pred CC----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHH
Confidence 74 3899999999999999999999996 6789999999999999 2 445679999999999999999999999
Q ss_pred HHh-CCC-----ceEEEecCc----cccccCceeeeeeecCcCccccccccCeeeeCCcccccCCcchhHHHHHHHhhcc
Q 016295 308 HAI-GGE-----GVVSAECKL----VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRLGIPITRVLFVLNVRLA 377 (392)
Q Consensus 308 ~~i-~~~-----~~~~v~C~~----~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~g~~fg~~~lr~ 377 (392)
+++ ++. +.|.+||+. +.+.|||..++||++++..... .+.+.|.+++......+.+++ |..|||+
T Consensus 231 ~~i~~a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~l~~~~~~~~~~-~~~~~C~~~i~~~~~~~~~IL----G~~fl~~ 305 (323)
T 1bxo_A 231 SQVSGAQQDSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPS-GDGSTCLGGIQSNSGIGFSIF----GDIFLKS 305 (323)
T ss_dssp TTSTTCEEETTTTEEEECTTCCCCCEEEEETTEEEEECHHHHEEEEC-SSSSCEEESEEECTTCSSEEE----CHHHHTT
T ss_pred HhCCCceEcCcCCEEEEECCCCCceEEEEECCEEEEECHHHeEEecc-CCCCeEEEEEECCCCCCcEEE----ChHHHcC
Confidence 999 553 789999985 4568899999999998854321 234689665554332334544 5555999
Q ss_pred eEEEEecCCccc
Q 016295 378 MQLVYSLGSCRQ 389 (392)
Q Consensus 378 ~y~VfD~e~~R~ 389 (392)
+|+|||+||+|.
T Consensus 306 ~y~vfD~~~~ri 317 (323)
T 1bxo_A 306 QYVVFDSDGPQL 317 (323)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEECCCCEE
Confidence 999999999883
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2e-53 Score=407.47 Aligned_cols=292 Identities=25% Similarity=0.431 Sum_probs=240.9
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceE
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSI 152 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~ 152 (392)
..+||+|+ +..|+++|+||||||++.|+|||||+++||+|. +.|+|++|++ ..++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~--~~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS--ATSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE--EEEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc--ccCceEEEEECCcEE
Confidence 46899997 668999999999999999999999999999742 4688888775 457899999999999
Q ss_pred EEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCcccccc--------CCCCChHHHHHHcCCCCCceEE
Q 016295 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV--------GDAVPVWDNMVEQGLVSEEVFS 224 (392)
Q Consensus 153 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--------~~~~~~~~~l~~~g~i~~~~fs 224 (392)
.|.+++|+|++|+.++++|.||++....+ | ..++||||||++..+. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999998653 3 2579999999998765 3567899999999999999999
Q ss_pred EEeCCCC-CCCCCceEEeCccCCCCccCceEEEeccc----cCceEEEeceEEEcc-eeeeeecCCeeEEEeCCCCCccc
Q 016295 225 FWLNRDP-DAEEGGEIVFGGVDPKHFKGKHTYVPVTK----KGYWQFELGDILIGN-QSTGVCEGGCAAIVDSGTSLLAG 298 (392)
Q Consensus 225 ~~l~~~~-~~~~~G~l~fGgid~~~~~g~l~~~p~~~----~~~w~v~~~~i~v~~-~~~~~~~~~~~aiiDTGt~~i~l 298 (392)
+||.+.. +....|+|+|||+|+++|.|+++|+|+.+ ..||.|. ++|.|++ +.+. ....+||||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12348999999999999999999999987 7899999 9999998 7653 2368999999999999
Q ss_pred CHHHHHHHHHHhCCC-----ceEEEecCc------cccccCceeeeeeecCcCccccc-----cccCeeeeCCccccc--
Q 016295 299 PTPVVTEINHAIGGE-----GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVC-----QQIGLCAFNGAEYVR-- 360 (392)
Q Consensus 299 P~~~~~~i~~~i~~~-----~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~-----~~~~~C~~~~~~~~~-- 360 (392)
|.+++++|.+++++. +.|.+||+. +.+.||+..++++++++...... ...+.|++.......
T Consensus 221 P~~~~~~l~~~~~a~~~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~ 300 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDS 300 (340)
T ss_dssp CHHHHHHHHHHHTCEECTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCT
T ss_pred CHHHHHHHHHhhCCEEcCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCC
Confidence 999999999999874 679999973 56789999999999987533211 123578555443111
Q ss_pred -CCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 361 -LGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 361 -~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
.+. .+++|..|||++|+|||+||+|.
T Consensus 301 ~~~~---~~iLG~~fl~~~y~vfD~~~~~i 327 (340)
T 1wkr_A 301 GEGL---DFINGLTFLERFYSVYDTTNKRL 327 (340)
T ss_dssp TSSC---CEEECHHHHTSEEEEEETTTTEE
T ss_pred CCCc---ceEeChHhhhheEEEEeCCCCeE
Confidence 111 13456666999999999999873
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=4e-54 Score=427.57 Aligned_cols=304 Identities=23% Similarity=0.317 Sum_probs=245.2
Q ss_pred eeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceEE
Q 016295 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~ 153 (392)
..+|.+..+..|+++|+||||||+|.|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 65 ~~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 139 (455)
T 3lpj_A 65 VDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWE 139 (455)
T ss_dssp TTCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred cccccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEE
Confidence 3456666788999999999999999999999999999999887 66789999999999999999999999999999
Q ss_pred EEEEeeEEEEce-EEec-CeEEEEEEEeCCcccccccceeeecCCccccccC--CCCChHHHHHHcCCCCCceEEEEeCC
Q 016295 154 GFFSQDNVEVGD-VVVK-DQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEEVFSFWLNR 229 (392)
Q Consensus 154 G~~~~D~v~~g~-~~~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~~fs~~l~~ 229 (392)
|.+++|+|+|++ ..++ .+.|+++............++||||||++.++.. ..++++++|++|+.|+ ++||+||++
T Consensus 140 G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~ 218 (455)
T 3lpj_A 140 GELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCG 218 (455)
T ss_dssp EEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECC
T ss_pred EEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecc
Confidence 999999999984 2222 3567777665542223457899999999988754 3789999999999996 999999986
Q ss_pred CCC--------CCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeec---CCeeEEEeCCCCCccc
Q 016295 230 DPD--------AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGCAAIVDSGTSLLAG 298 (392)
Q Consensus 230 ~~~--------~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~---~~~~aiiDTGt~~i~l 298 (392)
... ....|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+.+.. ....+||||||+++++
T Consensus 219 ~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~l 298 (455)
T 3lpj_A 219 AGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRL 298 (455)
T ss_dssp CSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEE
T ss_pred ccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeC
Confidence 421 23489999999999999999999999999999999999999999875432 2568999999999999
Q ss_pred CHHHHHHHHHHhCCC-----------ceEEEecCc-----------cccccCcee------eeeeecCcCccccccc--c
Q 016295 299 PTPVVTEINHAIGGE-----------GVVSAECKL-----------VVSQYGDLI------WDLLVSGLLPEKVCQQ--I 348 (392)
Q Consensus 299 P~~~~~~i~~~i~~~-----------~~~~v~C~~-----------~~~~fg~~~------~~v~~~~~~~~~~~~~--~ 348 (392)
|.+++++|++++++. ..|.++|+. +.+.|++.. ++|+++++.......+ .
T Consensus 299 P~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~ 378 (455)
T 3lpj_A 299 PKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQ 378 (455)
T ss_dssp EHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCS
T ss_pred CHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCC
Confidence 999999999999653 224689975 345777763 8999998854422221 2
Q ss_pred Ceeee-CCcccccCCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 349 GLCAF-NGAEYVRLGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 349 ~~C~~-~~~~~~~~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
+.|.. ++.. ..+.+ +||..|||++|+|||+||+|.
T Consensus 379 ~~C~~f~~~~--~~~~~----ILG~~fl~~~yvvfD~~~~rI 414 (455)
T 3lpj_A 379 DDCYKFAISQ--SSTGT----VMGAVIMEGFYVVFDRARKRI 414 (455)
T ss_dssp CEEEEECEEE--ESSCE----EECHHHHTTEEEEEETTTTEE
T ss_pred ceEEEEeccC--CCCcE----EEChHHhCCeEEEEECCCCEE
Confidence 58963 3322 22334 556666999999999999883
No 28
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1e-52 Score=382.51 Aligned_cols=237 Identities=64% Similarity=1.107 Sum_probs=218.4
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceE
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSI 152 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~ 152 (392)
..+||.|+.+.+|+++|.||||||++.|+|||||+++||++..|..+..|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 82 (239)
T 1b5f_A 3 AVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGSI 82 (239)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE
T ss_pred ceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCcE
Confidence 46899999999999999999999999999999999999999999656689999999999999999999999999999999
Q ss_pred EEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCC
Q 016295 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPD 232 (392)
Q Consensus 153 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~ 232 (392)
.|.++.|+|++++..+++|.||++....+..|....++||||||++..+ .|++++|++||+|++++||+||.+..+
T Consensus 83 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~~ 158 (239)
T 1b5f_A 83 TGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNVD 158 (239)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSCS
T ss_pred EEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999998876545666678999999998776 678999999999999999999998643
Q ss_pred CCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCC
Q 016295 233 AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 312 (392)
Q Consensus 233 ~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~ 312 (392)
....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.++..++.++|||||+++++|.+++++|++++|+
T Consensus 159 ~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 159 EEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp SSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 34589999999999999999999999999999999999999999876666778999999999999999999999999997
Q ss_pred C
Q 016295 313 E 313 (392)
Q Consensus 313 ~ 313 (392)
+
T Consensus 239 ~ 239 (239)
T 1b5f_A 239 N 239 (239)
T ss_dssp C
T ss_pred C
Confidence 4
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.4e-52 Score=406.45 Aligned_cols=303 Identities=24% Similarity=0.368 Sum_probs=240.8
Q ss_pred eeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceEEE
Q 016295 75 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISG 154 (392)
Q Consensus 75 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G 154 (392)
.+|++..+..|+++|+||||||++.|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|++.|
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G 79 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTG 79 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eeccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEE
Confidence 4677888899999999999999999999999999999999885 34 578999999999999999999999999999
Q ss_pred EEEeeEEEEceEE-ec-CeEEEEEEEeCCcccccccceeeecCCcccccc--CCCCChHHHHHHcCCCCCceEEEEeCCC
Q 016295 155 FFSQDNVEVGDVV-VK-DQVFIEATREGSLTFLLARFDGIIGLGFREIAV--GDAVPVWDNMVEQGLVSEEVFSFWLNRD 230 (392)
Q Consensus 155 ~~~~D~v~~g~~~-~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--~~~~~~~~~l~~~g~i~~~~fs~~l~~~ 230 (392)
.+++|+|++++.. .. .+.|+++............++||||||++.++. ...++++++|++|+.| +++||+||++.
T Consensus 80 ~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~ 158 (383)
T 2ewy_A 80 FVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGA 158 (383)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC
T ss_pred EEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeecc
Confidence 9999999998532 22 355676654433211234679999999998765 4578899999999999 89999999852
Q ss_pred -----CCCCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecC---CeeEEEeCCCCCcccCHHH
Q 016295 231 -----PDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEG---GCAAIVDSGTSLLAGPTPV 302 (392)
Q Consensus 231 -----~~~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~---~~~aiiDTGt~~i~lP~~~ 302 (392)
......|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.+... ...+||||||+++++|.++
T Consensus 159 ~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 238 (383)
T 2ewy_A 159 GLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKV 238 (383)
T ss_dssp ---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHH
T ss_pred ccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHH
Confidence 12335899999999999999999999999999999999999999988754322 4689999999999999999
Q ss_pred HHHHHHHhCCC--------c---eEEEecCc-----------cccccCce------eeeeeecCcCccccc-cccCeee-
Q 016295 303 VTEINHAIGGE--------G---VVSAECKL-----------VVSQYGDL------IWDLLVSGLLPEKVC-QQIGLCA- 352 (392)
Q Consensus 303 ~~~i~~~i~~~--------~---~~~v~C~~-----------~~~~fg~~------~~~v~~~~~~~~~~~-~~~~~C~- 352 (392)
+++|++++++. + .|.++|.. +.+.|++. .++||++++...... .....|.
T Consensus 239 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~ 318 (383)
T 2ewy_A 239 FDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYR 318 (383)
T ss_dssp HHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEE
T ss_pred HHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEE
Confidence 99999999653 2 24789964 33467664 688898887543211 1246896
Q ss_pred eCCcccccCCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 353 FNGAEYVRLGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 353 ~~~~~~~~~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
+++.. ....+ ++|..|||++|+|||+||+|.
T Consensus 319 ~~i~~--~~~~~----ILG~~fl~~~yvvfD~~~~rI 349 (383)
T 2ewy_A 319 FGISP--STNAL----VIGATVMEGFYVIFDRAQKRV 349 (383)
T ss_dssp ESEEE--ESSCE----EECHHHHTTEEEEEETTTTEE
T ss_pred EEecC--CCCcE----EEChHHhCCeeEEEECCCCeE
Confidence 34332 22334 556666999999999999873
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.8e-52 Score=409.76 Aligned_cols=301 Identities=24% Similarity=0.330 Sum_probs=239.5
Q ss_pred ceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceEEEEE
Q 016295 77 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFF 156 (392)
Q Consensus 77 l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~ 156 (392)
|....+..|+++|+||||||++.|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 4444577999999999999999999999999999999987 66688999999999999999999999999999999
Q ss_pred EeeEEEEc-eEEecC-eEEEEEEEeCCcccccccceeeecCCccccccC--CCCChHHHHHHcCCCCCceEEEEeCCCC-
Q 016295 157 SQDNVEVG-DVVVKD-QVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEEVFSFWLNRDP- 231 (392)
Q Consensus 157 ~~D~v~~g-~~~~~~-~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~~fs~~l~~~~- 231 (392)
++|+|+++ +..++. +.|+++............++||||||++..+.. ..++++++|++|+.|+ ++||+||++..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 444443 346666655432223457899999999988764 3789999999999996 99999997531
Q ss_pred ----C---CCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeec---CCeeEEEeCCCCCcccCHH
Q 016295 232 ----D---AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGCAAIVDSGTSLLAGPTP 301 (392)
Q Consensus 232 ----~---~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~---~~~~aiiDTGt~~i~lP~~ 301 (392)
. ....|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.+.. ....++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23489999999999999999999999999999999999999999875432 2568999999999999999
Q ss_pred HHHHHHHHhCCC-----------ceEEEecCc-----------cccccCce------eeeeeecCcCccccccc--cCee
Q 016295 302 VVTEINHAIGGE-----------GVVSAECKL-----------VVSQYGDL------IWDLLVSGLLPEKVCQQ--IGLC 351 (392)
Q Consensus 302 ~~~~i~~~i~~~-----------~~~~v~C~~-----------~~~~fg~~------~~~v~~~~~~~~~~~~~--~~~C 351 (392)
++++|++++++. ..|.++|+. +.+.|++. .++|+++++.......+ .+.|
T Consensus 256 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C 335 (402)
T 3vf3_A 256 VFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDC 335 (402)
T ss_dssp HHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEE
T ss_pred HHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceE
Confidence 999999999653 124689975 34577776 48999988854422211 1489
Q ss_pred e-eCCcccccCCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 352 A-FNGAEYVRLGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 352 ~-~~~~~~~~~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
. +++.. ..+.+ +||..|||++|+|||+||+|.
T Consensus 336 ~~~~~~~--~~~~~----ILG~~fl~~~yvvfD~~~~rI 368 (402)
T 3vf3_A 336 YKFAISQ--SSTGT----VMGAVIMEGFYVVFDRARKRI 368 (402)
T ss_dssp EEECEEE--ESSCE----EECHHHHTTEEEEEEGGGTEE
T ss_pred EEEeccC--CCCcE----EEChHHhCCeEEEEECCCCEE
Confidence 6 34332 22334 556666999999999999883
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.3e-51 Score=402.62 Aligned_cols=302 Identities=25% Similarity=0.333 Sum_probs=240.8
Q ss_pred eeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcceEEE
Q 016295 75 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISG 154 (392)
Q Consensus 75 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G 154 (392)
-+|++..+..|+++|+||||||++.|+|||||+++||++..|. .| ++.|++++|+||+..++.|.+.|++|++.|
T Consensus 13 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 87 (395)
T 2qp8_A 13 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 87 (395)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEE
Confidence 3566667889999999999999999999999999999999884 33 688999999999999999999999999999
Q ss_pred EEEeeEEEEc-eEEec-CeEEEEEEEeCCcccc-cccceeeecCCccccccC--CCCChHHHHHHcCCCCCceEEEEeCC
Q 016295 155 FFSQDNVEVG-DVVVK-DQVFIEATREGSLTFL-LARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEEVFSFWLNR 229 (392)
Q Consensus 155 ~~~~D~v~~g-~~~~~-~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~~fs~~l~~ 229 (392)
.+++|+|+++ +..++ .+.|++...... .|. ...++||||||++.++.. ...+++++|++|+.|+ ++||+||++
T Consensus 88 ~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~ 165 (395)
T 2qp8_A 88 ELGTDLVSIPHGPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCG 165 (395)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECC
T ss_pred EEEeEEEEECCCCCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEecc
Confidence 9999999998 55444 255676654433 232 356799999999987643 5788999999999996 899999986
Q ss_pred CCC--------CCCCceEEeCccCCCCccCceEEEeccccCceEEEeceEEEcceeeeeec---CCeeEEEeCCCCCccc
Q 016295 230 DPD--------AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGCAAIVDSGTSLLAG 298 (392)
Q Consensus 230 ~~~--------~~~~G~l~fGgid~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~---~~~~aiiDTGt~~i~l 298 (392)
... ....|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.+.. ....+||||||+++++
T Consensus 166 ~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~l 245 (395)
T 2qp8_A 166 AGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRL 245 (395)
T ss_dssp CSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEE
T ss_pred ccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEec
Confidence 410 12489999999999999999999999999999999999999998875432 2468999999999999
Q ss_pred CHHHHHHHHHHhCCC--------ce---EEEecCcc-----------ccccCce------eeeeeecCcCccccc--ccc
Q 016295 299 PTPVVTEINHAIGGE--------GV---VSAECKLV-----------VSQYGDL------IWDLLVSGLLPEKVC--QQI 348 (392)
Q Consensus 299 P~~~~~~i~~~i~~~--------~~---~~v~C~~~-----------~~~fg~~------~~~v~~~~~~~~~~~--~~~ 348 (392)
|.+++++|++++++. +. |.++|... .+.|++. .++++++++...... .+.
T Consensus 246 P~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~ 325 (395)
T 2qp8_A 246 PKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQ 325 (395)
T ss_dssp EHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCS
T ss_pred CHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCC
Confidence 999999999999652 11 36899752 3467665 588888887543211 123
Q ss_pred Ceee-eCCcccccCCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 349 GLCA-FNGAEYVRLGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 349 ~~C~-~~~~~~~~~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
..|. +++.. ....+ ++|..|||++|+|||+||+|.
T Consensus 326 ~~C~~~~i~~--~~~~~----ILG~~fl~~~yvvfD~~~~rI 361 (395)
T 2qp8_A 326 DDCYKFAISQ--SSTGT----VMGAVIMEGFYVVFDRARKRI 361 (395)
T ss_dssp CEEEEECEEE--ESSCE----EECHHHHTTEEEEEETTTTEE
T ss_pred ceEEEEEecC--CCCcE----EEChHHhCCeeEEEECCCCEE
Confidence 5895 45543 22334 456666999999999999873
No 32
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=8.9e-50 Score=390.51 Aligned_cols=299 Identities=16% Similarity=0.193 Sum_probs=234.4
Q ss_pred cceeece-ecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCC-----------CCCCCcccCcCccc------cCCCC
Q 016295 72 EDILPLK-NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS-----------KCYFSISCYFHSRY------KSRKS 133 (392)
Q Consensus 72 ~~~~~l~-~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~-----------~C~~~~~C~~~~~y------~~~~S 133 (392)
...+||+ |+.+.+|+++|.||||||++.|+|||||+++||+|. .|. +..|..++.| ++.+|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 3468999 888999999999999999999999999999999999 564 4568777777 55544
Q ss_pred CceeecCCEEEEEcC-cce-EEEEEEeeEEEEce-----------EEecCeEEEEEEEeCCcccccccceeeecCCcccc
Q 016295 134 NTYTEIGKSCEINYG-SGS-ISGFFSQDNVEVGD-----------VVVKDQVFIEATREGSLTFLLARFDGIIGLGFREI 200 (392)
Q Consensus 134 st~~~~~~~~~~~Y~-~g~-~~G~~~~D~v~~g~-----------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~ 200 (392)
++....+.|.+.|+ +++ +.|.+++|+|++++ +.+++|.||++.......+.....+||||||++.+
T Consensus 88 -~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 -GCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp -TBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred -CCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 35556789999998 554 89999999999998 89999999999876432244557899999999876
Q ss_pred ccCCCCChHHHHHHcCCCCCceEEEEeCCCCCCCCCceEEeCccCCCCc--c-C-----ceEEEecccc--CceEEEece
Q 016295 201 AVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHF--K-G-----KHTYVPVTKK--GYWQFELGD 270 (392)
Q Consensus 201 s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~fGgid~~~~--~-g-----~l~~~p~~~~--~~w~v~~~~ 270 (392)
+ +..+|. ++.+.+++||+||.+.. ...|.|+||| |+++| . | ++.|+|+... ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 5 666774 55577899999998852 2489999999 99998 6 6 9999999876 899999999
Q ss_pred EEEcceee-eeecC--------CeeEEEeCCCCCcccCHHHHHHHHHHh----CC--------CceEEEecCc------c
Q 016295 271 ILIGNQST-GVCEG--------GCAAIVDSGTSLLAGPTPVVTEINHAI----GG--------EGVVSAECKL------V 323 (392)
Q Consensus 271 i~v~~~~~-~~~~~--------~~~aiiDTGt~~i~lP~~~~~~i~~~i----~~--------~~~~~v~C~~------~ 323 (392)
|.|+++.+ .+... ...+||||||+++++|++++++|.++| ++ ...|-++|+. +
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i 316 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSV 316 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCE
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcE
Confidence 99999877 43221 234999999999999999999999999 43 1236789985 4
Q ss_pred ccccCce---eeeeeecCcCccccccccCeeeeCCccccc--CCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 324 VSQYGDL---IWDLLVSGLLPEKVCQQIGLCAFNGAEYVR--LGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 324 ~~~fg~~---~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~--~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
.+.|++. .++|+++++.... .+...|. ++..... ...+ ++|..|||++|+|||+||+|.
T Consensus 317 ~f~f~g~~~~~~~l~~~~y~~~~--~~~~~C~-~~~~~~~~~~~~~----ILG~~fl~~~yvvfD~~~~rI 380 (403)
T 3aup_A 317 DLVMDKPNGPVWRISGEDLMVQA--QPGVTCL-GVMNGGMQPRAEI----TLGARQLEENLVVFDLARSRV 380 (403)
T ss_dssp EEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCSCCSSSE----EECHHHHTTSCEEEETTTTEE
T ss_pred EEEEcCCCceEEEEcccceEEEc--CCCeEEE-EEEcCCCCCCCcE----EEChHHhcCeEEEEECCCCEE
Confidence 5678875 9999999986442 2346894 5554322 1234 455566999999999999873
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=4.5e-48 Score=378.36 Aligned_cols=302 Identities=16% Similarity=0.175 Sum_probs=234.4
Q ss_pred Ccceeecee-cCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCC----------CCcccCcCccccCCC-----CC
Q 016295 71 DEDILPLKN-FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY----------FSISCYFHSRYKSRK-----SN 134 (392)
Q Consensus 71 ~~~~~~l~~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~----------~~~~C~~~~~y~~~~-----Ss 134 (392)
....+|++. ..+.+|+++|+||||||+|.|+|||||+++||+|..|. .+..|..++.|++.. ++
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBT
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCC
Confidence 345677775 45689999999999999999999999999999996542 144677777787642 34
Q ss_pred ceeecCCEEEEEcC-cce-EEEEEEeeEEEEc---------eEEecCeEEEEEEEeCCcccccccceeeecCCccccccC
Q 016295 135 TYTEIGKSCEINYG-SGS-ISGFFSQDNVEVG---------DVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG 203 (392)
Q Consensus 135 t~~~~~~~~~~~Y~-~g~-~~G~~~~D~v~~g---------~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 203 (392)
++....+.|.+.|+ +++ +.|.+++|+|+|+ ++.++++.|||+....... ....++||||||++.++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc--
Confidence 56666789999995 655 7999999999997 3688999999998753211 23568999999999876
Q ss_pred CCCChHHHHHHcCCCCCceEEEEeCCCCCCCCCceEEeCccCCCC-----ccCc-eEEEecccc--------------Cc
Q 016295 204 DAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKH-----FKGK-HTYVPVTKK--------------GY 263 (392)
Q Consensus 204 ~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~fGgid~~~-----~~g~-l~~~p~~~~--------------~~ 263 (392)
+..+|.+|+.| +++||+||.+.. ..+|+|+|||+|..+ |.|+ ++|+|+... .|
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 88899999999 999999999842 348999999998753 7889 999999765 69
Q ss_pred eEEEeceEEEcceeeeeec--------CCeeEEEeCCCCCcccCHHHHHHHHHHhCCC----------c-eEEEecCc--
Q 016295 264 WQFELGDILIGNQSTGVCE--------GGCAAIVDSGTSLLAGPTPVVTEINHAIGGE----------G-VVSAECKL-- 322 (392)
Q Consensus 264 w~v~~~~i~v~~~~~~~~~--------~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~----------~-~~~v~C~~-- 322 (392)
|.|+|++|+||++.+.+.. .++.+||||||+++++|.+++++|.++|++. + .+..+|..
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~ 316 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTD 316 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECT
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccC
Confidence 9999999999999876432 3578999999999999999999999888542 1 12356753
Q ss_pred -------------cccccCc--eeeeeeecCcCccccccccCeeeeCCcccccC--CcchhHHHHHHHhhcceEEEEecC
Q 016295 323 -------------VVSQYGD--LIWDLLVSGLLPEKVCQQIGLCAFNGAEYVRL--GIPITRVLFVLNVRLAMQLVYSLG 385 (392)
Q Consensus 323 -------------~~~~fg~--~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~~--~~~~~g~~fg~~~lr~~y~VfD~e 385 (392)
+.+.|+| ..++|+++++.... .+...| +++...... ..+ ++|+.|||++|+|||+|
T Consensus 317 ~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~--~~~~~C-l~~~~~~~~~~~~~----IlGd~fl~~~~vvfD~~ 389 (413)
T 3vla_A 317 NILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYI--NDNVVC-LGVVDGGSNLRTSI----VIGGHQLEDNLVQFDLA 389 (413)
T ss_dssp TCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEE--ETTEEE-ECEEEEESSCSSSE----EECHHHHTTEEEEEETT
T ss_pred CccccccccCCCcEEEEEcCCcEEEEeCccceEEEe--CCCcEE-EEEEecCCCcccce----eEehhhhcCeEEEEECC
Confidence 3357877 88999999886542 223478 666543221 234 45556699999999999
Q ss_pred Cccc
Q 016295 386 SCRQ 389 (392)
Q Consensus 386 ~~R~ 389 (392)
|+|-
T Consensus 390 ~~ri 393 (413)
T 3vla_A 390 TSRV 393 (413)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 9883
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.5e-45 Score=357.97 Aligned_cols=291 Identities=15% Similarity=0.164 Sum_probs=218.8
Q ss_pred eeece-ecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCC-------CCcccCcCccccCCCCCcee-------e
Q 016295 74 ILPLK-NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY-------FSISCYFHSRYKSRKSNTYT-------E 138 (392)
Q Consensus 74 ~~~l~-~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~-------~~~~C~~~~~y~~~~Sst~~-------~ 138 (392)
.+|++ ++.+.+|+++|.|||| |+|||||+++||+|..|. .+..|..++.|++. |+++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~-sc~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAP-GCPAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCT-TCCCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCC-CCCCccCCcCcCC
Confidence 57887 7789999999999997 999999999999985442 13467666778775 33332 1
Q ss_pred cCC-EEEEEcCcce-EEEEEEeeEEEEce----EEecCe----EEEEEEEeCCcccccccceeeecCCccccccCCCCCh
Q 016295 139 IGK-SCEINYGSGS-ISGFFSQDNVEVGD----VVVKDQ----VFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPV 208 (392)
Q Consensus 139 ~~~-~~~~~Y~~g~-~~G~~~~D~v~~g~----~~~~~~----~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 208 (392)
..+ .|.+.|++|+ +.|.+++|+|++++ ..++++ .||++.......+ ...++||||||++.++ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 223 5999999999 48999999999985 567776 4588876522222 3568999999998775 7
Q ss_pred HHHHHHcCCCCCceEEEEeCCCCCCCCCceEEeCccCCC--CccCceEEEecccc---CceEEEeceEEEcceeeeeecC
Q 016295 209 WDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPK--HFKGKHTYVPVTKK---GYWQFELGDILIGNQSTGVCEG 283 (392)
Q Consensus 209 ~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~fGgid~~--~~~g~l~~~p~~~~---~~w~v~~~~i~v~~~~~~~~~~ 283 (392)
..+|.+|+++ +++||+||.+. .+|+|+|||+|.. +|.|+++|+|+.+. .+|.|.+++|+|+++.+..+..
T Consensus 151 ~~ql~~~~~~-~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQKV-ANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHTC-CSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhccc-CceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 7899999854 89999999875 3899999998775 58999999999763 4667999999999988764433
Q ss_pred ---CeeEEEeCCCCCcccCHHHHHHHHHHhCCC-----------------ceEEEecCc---------------cccccC
Q 016295 284 ---GCAAIVDSGTSLLAGPTPVVTEINHAIGGE-----------------GVVSAECKL---------------VVSQYG 328 (392)
Q Consensus 284 ---~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~-----------------~~~~v~C~~---------------~~~~fg 328 (392)
.+.+||||||+++++|++++++|.+++++. ..+.++|.. +.+.|+
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~ 305 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLD 305 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEET
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEEEEEC
Confidence 357999999999999999999888776431 112357752 345786
Q ss_pred -ceeeeeeecCcCccccccccCeeeeCCccccc-------CCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 329 -DLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVR-------LGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 329 -~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~~-------~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
+..++||++++.... .....| ++...... ...+ ++|+.|||++|+|||+||+|-
T Consensus 306 gg~~~~l~~~~y~~~~--~~~~~C-l~~~~~~~~~~~~~~~~~~----ILGd~fl~~~yvvfD~~~~ri 367 (381)
T 1t6e_X 306 GGSDWTMTGKNSMVDV--KQGTAC-VAFVEMKGVAAGDGRAPAV----ILGGAQMEDFVLDFDMEKKRL 367 (381)
T ss_dssp TSCEEEECHHHHEEEE--ETTEEE-ESEEECCCCC------CSE----EECHHHHTTEEEEEETTTTEE
T ss_pred CCcEEEeCCCeEEEEc--CCCeEE-EEEEcCCCcccccCCCceE----EEChHHhCCcEEEEECCCCEE
Confidence 589999999885442 123578 56543322 1234 455566999999999999883
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.6e-39 Score=296.13 Aligned_cols=221 Identities=36% Similarity=0.614 Sum_probs=185.9
Q ss_pred ceEEecCeEEEEEEEeCCcccccccceeeecCCccccccCCCCChHHHHHHcCCCCCceEEEEeCCCCCCCCCceEEeCc
Q 016295 164 GDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 243 (392)
Q Consensus 164 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~fGg 243 (392)
|++++++|.||++....+..|....++||||||++..+....++++++|++||+|++++||+||++.......|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999886655666788999999999888777789999999999999999999999875333489999999
Q ss_pred cCCCCccCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHHHHHhCCC----ceEEEe
Q 016295 244 VDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE----GVVSAE 319 (392)
Q Consensus 244 id~~~~~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~----~~~~v~ 319 (392)
+|+++|+|+++|+|+.+.++|.|.+++|+|+++.+ .+..++.+++||||+++++|.+++++|++++++. +.|.+|
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~-~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~ 159 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLT-LCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIP 159 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCE-ESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEETTEEEEE
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeE-eccCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccCCcEEEE
Confidence 99999999999999999999999999999999864 2567789999999999999999999999999885 789999
Q ss_pred cCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccc----cCCcchhHHHHHHHhhcceEEEEecCCccc
Q 016295 320 CKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYV----RLGIPITRVLFVLNVRLAMQLVYSLGSCRQ 389 (392)
Q Consensus 320 C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~g~~fg~~~lr~~y~VfD~e~~R~ 389 (392)
|+. +.+.||+..++||++++.......+.+.|.+++.... ....+ ++|..|||++|+|||+||+|.
T Consensus 160 C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~----ilG~~fl~~~y~vfD~~~~~i 235 (241)
T 1lya_B 160 CEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLW----ILGDVFIGRYYTVFDRDNNRV 235 (241)
T ss_dssp GGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCE----EECHHHHTTEEEEEETTTTEE
T ss_pred CCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeE----EechHHhcceEEEEECCCCEE
Confidence 984 4668999999999999965432233568965555432 12334 455566999999999999884
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.93 E-value=1.3e-25 Score=173.54 Aligned_cols=93 Identities=60% Similarity=1.057 Sum_probs=87.1
Q ss_pred ceeeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCC-CcccCcCccccCCCCCceeecCCEEEEEcCcce
Q 016295 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (392)
Q Consensus 73 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~ 151 (392)
..+||.|+.+.+|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|+|.+|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999952 257988999999999999999999999999999
Q ss_pred EEEEEEeeEEEEce
Q 016295 152 ISGFFSQDNVEVGD 165 (392)
Q Consensus 152 ~~G~~~~D~v~~g~ 165 (392)
+.|.++.|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.03 E-value=6.7e-11 Score=89.10 Aligned_cols=72 Identities=10% Similarity=0.014 Sum_probs=50.3
Q ss_pred ceEEEecCc------cccccCceeeeeeecCcCccccccccCeeeeCCcccc---cCCcchhHHHHHHHhhcceEEEEec
Q 016295 314 GVVSAECKL------VVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYV---RLGIPITRVLFVLNVRLAMQLVYSL 384 (392)
Q Consensus 314 ~~~~v~C~~------~~~~fg~~~~~v~~~~~~~~~~~~~~~~C~~~~~~~~---~~~~~~~g~~fg~~~lr~~y~VfD~ 384 (392)
|.|.+||++ +.+.|||+.++++++++.......+.+.|..+..... ....+ +||+.|||++|+|||+
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~----ILGd~Fl~~~y~vfD~ 76 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLW----ILGDVFMRPYHTVFDY 76 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEE----EECHHHHTTEEEEEET
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeE----EechHHhccEEEEEEC
Confidence 568999985 4568899999999999865432222468965555321 12234 4555669999999999
Q ss_pred CCccc
Q 016295 385 GSCRQ 389 (392)
Q Consensus 385 e~~R~ 389 (392)
||+|-
T Consensus 77 ~~~ri 81 (87)
T 1b5f_B 77 GNLLV 81 (87)
T ss_dssp TTTEE
T ss_pred CCCEE
Confidence 99883
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.019 Score=46.86 Aligned_cols=97 Identities=18% Similarity=0.193 Sum_probs=53.1
Q ss_pred eeceecCCceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcce--E
Q 016295 75 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS--I 152 (392)
Q Consensus 75 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~--~ 152 (392)
.|..-.....+++++.|+. +++++++|||++.+.+...... .+.-....+. .+. ....+.|. .
T Consensus 17 ~p~~~~~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~~----~~~------~~a~g~g~~~~ 81 (148)
T 2i1a_A 17 TPEMFTQVPMLYINIEINN--YPVKAFVDTGAQTTIMSTRLAK---KTGLSRMIDK----RFI------GEARGVGTGKI 81 (148)
T ss_dssp ------CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HHTGGGGCBC----CCC-----------------
T ss_pred CchhhcccceEEEEEEECC--EEEEEEEECCCCccccCHHHHH---HcCCCccCCc----ceE------EEEecCCCccc
Confidence 3444445678999999997 8999999999999888532111 1111111111 111 01122222 3
Q ss_pred EEEEEeeEEEEceEEecCeEEEEEEEeCCcccccccceeeecCC
Q 016295 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLG 196 (392)
Q Consensus 153 ~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 196 (392)
.|....+.+.+|+...+ ..|.+.. . +.+||||+-
T Consensus 82 ~~~~~~~~i~ig~~~~~-~~~~vl~--~-------~~d~iLG~d 115 (148)
T 2i1a_A 82 IGRIHQAQVKIETQYIP-CSFTVLD--T-------DIDVLIGLD 115 (148)
T ss_dssp CEEEEEEEEEETTEEEE-EEEEEEC--S-------SCSEEECHH
T ss_pred ccEEEEEEEEECCEEec-eeEEEec--C-------CCCeEecHH
Confidence 46666788999998764 5555433 1 258999985
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.04 E-value=0.19 Score=40.90 Aligned_cols=91 Identities=12% Similarity=0.207 Sum_probs=53.5
Q ss_pred CceEEEEEEEcCCCceEEEEeccCCCceEEeCCCCCCCcccCcCccccCCCCCceeecCCEEEEEcCcc--eEEEEEEee
Q 016295 82 DAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG--SISGFFSQD 159 (392)
Q Consensus 82 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g--~~~G~~~~D 159 (392)
-..|++++.|+. +++++++|||++.+.+...-.. .|.-...-+. .+. . ...+-| .+.|..-..
T Consensus 22 ~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~----~~~-----~-~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVNG--HPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR----RWA-----G-VAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG----GGC-----E-ECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEECC--EEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc----cee-----E-EEEcCCccEEEEEEEEE
Confidence 467899999987 9999999999999998543211 2211110000 000 0 001112 246777778
Q ss_pred EEEEceEEecCeEEEEEEEeCCcccccccceeeecCC
Q 016295 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLG 196 (392)
Q Consensus 160 ~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 196 (392)
.+.+|+..++ ..|.+.. ....++|||+-
T Consensus 87 ~I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 87 QIQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 8999987653 4444332 12358999985
No 40
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=86.65 E-value=0.55 Score=29.25 Aligned_cols=25 Identities=24% Similarity=0.177 Sum_probs=20.4
Q ss_pred ceEEEeeeeecCchhhhHHhhhhhh
Q 016295 27 GLRRIGLKKRRLDLHSLNAARITRK 51 (392)
Q Consensus 27 ~~~~ipl~~~~~~~~~~~~~~~~~~ 51 (392)
+++||||+|.++.+..+.+.+....
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~~~ 31 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVDMA 31 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCCGG
T ss_pred ceeEEeeeecccHHHHHHHcCchHH
Confidence 5789999999999999888765433
No 41
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=85.60 E-value=1 Score=27.57 Aligned_cols=26 Identities=12% Similarity=0.073 Sum_probs=21.2
Q ss_pred eEEEeeeeecCchhhhHHhhhhhhhh
Q 016295 28 LRRIGLKKRRLDLHSLNAARITRKER 53 (392)
Q Consensus 28 ~~~ipl~~~~~~~~~~~~~~~~~~~~ 53 (392)
++||||+|.++.+..+.+.+...+.+
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~~~~l 27 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLLGEFL 27 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHH
T ss_pred eEEEeeeEcchHHHHHHHcCcHHHHH
Confidence 68999999999999888777665554
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=84.62 E-value=1.4 Score=32.94 Aligned_cols=31 Identities=23% Similarity=0.242 Sum_probs=26.3
Q ss_pred EEEEEEEcCCCceEEEEeccCCCceEEeCCCCC
Q 016295 85 YFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY 117 (392)
Q Consensus 85 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~ 117 (392)
=++.|.||. |.+++++|||..++-+...+++
T Consensus 9 P~vtvkI~G--q~~eaLLDTGAD~TVl~~~~~p 39 (99)
T 2hs1_A 9 PLVTIKIGG--QLKEALLDTGADDTIIEEMSLP 39 (99)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSEEESCCSSC
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEecccCC
Confidence 467799998 9999999999999999766553
No 43
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=81.37 E-value=1.7 Score=32.90 Aligned_cols=28 Identities=18% Similarity=0.249 Sum_probs=24.5
Q ss_pred eEEEEEEEcCCCceEEEEeccCCCceEEeC
Q 016295 84 QYFGEIGIGSPPQNFSVIFDTGSSNLWVPS 113 (392)
Q Consensus 84 ~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~ 113 (392)
.-++.|.||. |.+++++|||..++-+..
T Consensus 8 RP~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 8 RPTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 4567899997 999999999999999973
No 44
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=80.42 E-value=1.2 Score=25.82 Aligned_cols=27 Identities=19% Similarity=0.138 Sum_probs=20.1
Q ss_pred ceEEEeeeeecCchhhhHHhhhhhhhh
Q 016295 27 GLRRIGLKKRRLDLHSLNAARITRKER 53 (392)
Q Consensus 27 ~~~~ipl~~~~~~~~~~~~~~~~~~~~ 53 (392)
+++||||+|.++.+..+.+.+.....+
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~~~~l 28 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQLSEFW 28 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccHHHHH
Confidence 468999999999888877665544443
No 45
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=80.37 E-value=2.4 Score=31.62 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=26.3
Q ss_pred eEEEEEEEcCCCceEEEEeccCCCceEEeCCCC
Q 016295 84 QYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (392)
Q Consensus 84 ~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C 116 (392)
.=++.|.||. |.+++++|||..++-+...++
T Consensus 8 RP~vti~I~G--q~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 8 RPVVTAYIEG--QPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEESSCCC
T ss_pred CCeEEEEECC--EEEEEEEecCCCceEEcCccc
Confidence 3467899998 999999999999999976554
No 46
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=77.02 E-value=2.4 Score=32.42 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=27.2
Q ss_pred EEEEEEEc---CCCceEEEEeccCCCceEEeCCCCC
Q 016295 85 YFGEIGIG---SPPQNFSVIFDTGSSNLWVPSSKCY 117 (392)
Q Consensus 85 Y~~~i~iG---tP~q~~~v~~DTGSs~~wv~~~~C~ 117 (392)
=.+.|.|| +|+|.+..++|||..++-++..+++
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 45666666 7789999999999999999876664
No 47
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=68.75 E-value=5 Score=30.85 Aligned_cols=29 Identities=14% Similarity=0.111 Sum_probs=24.2
Q ss_pred eEEEEEEEcCCCceEEEEeccCCCceEEeCCC
Q 016295 84 QYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK 115 (392)
Q Consensus 84 ~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~ 115 (392)
.=++ |.||. |.+++++|||..++-+...+
T Consensus 14 rP~v-ikI~G--q~~eaLLDTGAD~TVi~~~~ 42 (116)
T 2hah_A 14 PEIL-IFVNG--YPIKFLLDTGADITVLNRRD 42 (116)
T ss_dssp CEEE-EEETT--EEEEEEECTTCSSCEEEGGG
T ss_pred CCEE-EEECC--EEEEEEecCCCCcEEEcccc
Confidence 4455 99997 99999999999999997543
No 48
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=67.84 E-value=4.7 Score=32.17 Aligned_cols=29 Identities=28% Similarity=0.298 Sum_probs=24.0
Q ss_pred EEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHH
Q 016295 271 ILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEI 306 (392)
Q Consensus 271 i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 306 (392)
+.|||+.+ .+++|||++.+.++.+.++.+
T Consensus 31 v~InG~~~-------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV-------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE-------EEEEECCCCccccCHHHHHHc
Confidence 56788744 699999999999998887765
No 49
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=67.38 E-value=4.3 Score=32.71 Aligned_cols=29 Identities=17% Similarity=0.219 Sum_probs=23.8
Q ss_pred EEEcceeeeeecCCeeEEEeCCCCCcccCHHHHHHH
Q 016295 271 ILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEI 306 (392)
Q Consensus 271 i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 306 (392)
+.|||..+ .+++|||++.+.++.+.++.+
T Consensus 29 ~~Ing~~v-------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL-------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE-------EEEEeCCCCcEeeCHHHHHHc
Confidence 34777654 699999999999999888776
No 50
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=66.51 E-value=5.9 Score=30.31 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=26.0
Q ss_pred EEEEEEEcCCCceEEEEeccCCCceEEeCCCCC
Q 016295 85 YFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY 117 (392)
Q Consensus 85 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C~ 117 (392)
=.+.|.||. |.+.+++|||..++-+...+++
T Consensus 10 P~vti~I~G--q~~eaLLDTGADdTVi~~~~lp 40 (114)
T 3sqf_A 10 PSLTLWLDD--KMFTGLINTGADVTIIKLEDWP 40 (114)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEEGGGSC
T ss_pred CeEEEEECC--EEEEEEEccCCCceEEecccCC
Confidence 456788998 9999999999999999766553
No 51
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=62.67 E-value=10 Score=29.88 Aligned_cols=31 Identities=16% Similarity=0.252 Sum_probs=26.1
Q ss_pred ceEEEEEEEcCCCceEEEEeccCCCceEEeCCC
Q 016295 83 AQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK 115 (392)
Q Consensus 83 ~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~ 115 (392)
..-++.+.|+. |.+++++|||.+++-+....
T Consensus 21 ~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 21 PEPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CSSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 45677799998 99999999999999997544
No 52
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=53.31 E-value=15 Score=28.58 Aligned_cols=25 Identities=12% Similarity=0.170 Sum_probs=20.9
Q ss_pred EcCCCceEEEEeccCCCceEEeCCCCC
Q 016295 91 IGSPPQNFSVIFDTGSSNLWVPSSKCY 117 (392)
Q Consensus 91 iGtP~q~~~v~~DTGSs~~wv~~~~C~ 117 (392)
||. |.++.++|||-.++-+...+.+
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~~lP 51 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEEDWP 51 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETTTSC
T ss_pred CCC--EEEEEEecCCCCcEEEecccCC
Confidence 555 8889999999999999876653
No 53
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=52.91 E-value=17 Score=33.02 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=32.4
Q ss_pred cCceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHH
Q 016295 250 KGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVV 303 (392)
Q Consensus 250 ~g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 303 (392)
.|.+...|+.....|.++ |.||.+. ..+++|||++.+++|...+
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGTT-------LNLNFDTGSADLWVFSTEL 46 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTEE-------EEEEEETTCCCEEECBTTS
T ss_pred CCceeeeecCCCCEEEEE---EEECCEE-------EEEEEeCCCcceEEecCCC
Confidence 456677777767777665 5788333 4799999999999997544
No 54
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=49.43 E-value=21 Score=32.45 Aligned_cols=44 Identities=16% Similarity=0.188 Sum_probs=31.7
Q ss_pred CceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHH
Q 016295 251 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVT 304 (392)
Q Consensus 251 g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~ 304 (392)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|...+.
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q-------~~~v~~DTGSs~lWv~~~~C~ 47 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDD-------TLGLDFDTGSADLWVFSSQTP 47 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTE-------EEEEEEETTCCCEEECBTTSC
T ss_pred CceeeeEcCCCCEEEEE---EEECCE-------EEEEEEcCCCcceEEecCCCC
Confidence 55666677666677665 578733 347999999999999975443
No 55
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=49.14 E-value=18 Score=32.80 Aligned_cols=43 Identities=14% Similarity=0.140 Sum_probs=31.4
Q ss_pred CceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHH
Q 016295 251 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVV 303 (392)
Q Consensus 251 g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 303 (392)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|...+
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKS-------TLHLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTE-------EEEEEEETTCCCEEEECTTS
T ss_pred ceEEeEEcCCCCEEEEE---EEECCE-------EEEEEEeCCCccceEeeCCC
Confidence 55666777667777665 567733 34799999999999987544
No 56
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=48.77 E-value=16 Score=30.91 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=25.9
Q ss_pred ceEEEEEEEcCCCceEEEEeccCCCceEEeCCC
Q 016295 83 AQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK 115 (392)
Q Consensus 83 ~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~ 115 (392)
..-.+.|.||. |.+++++|||..++-+...+
T Consensus 7 ~RP~vtv~I~G--q~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 7 KRPLVTIRIGG--QLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp SCCEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCCeEEEEECC--EEEEEEEecCCCceEEeccc
Confidence 34577899998 99999999999999996444
No 57
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=39.08 E-value=35 Score=29.37 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=27.7
Q ss_pred eeeceecCCceEEEE---EEEcCC-----CceEEEEeccCCCceEEeCC
Q 016295 74 ILPLKNFMDAQYFGE---IGIGSP-----PQNFSVIFDTGSSNLWVPSS 114 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~wv~~~ 114 (392)
.+|+.. ...|.++ |.||.. .....+++|||++.+++|..
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 466654 2456554 788862 34578999999999999853
No 58
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=36.91 E-value=35 Score=32.00 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=29.0
Q ss_pred cceeeceecCCceEEEE---EEEcCCCceE----------------EEEeccCCCceEEeCC
Q 016295 72 EDILPLKNFMDAQYFGE---IGIGSPPQNF----------------SVIFDTGSSNLWVPSS 114 (392)
Q Consensus 72 ~~~~~l~~~~~~~Y~~~---i~iGtP~q~~----------------~v~~DTGSs~~wv~~~ 114 (392)
...+|+.......|.++ |+||. +.+ .+++|||++.+.+|..
T Consensus 217 l~~~Pl~~~~~~~y~v~l~~i~v~g--~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 217 LAFTPLTITLQGEYNVRVNSIRINQ--HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp EEEEECEECTTSCEEECEEEEEETT--EEEECC------------CCEEECSSCSSEEECHH
T ss_pred eeecccccCCCCcceEEEEEEEECC--EEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 34678876433567764 77886 333 1899999999999864
No 59
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=36.58 E-value=36 Score=31.29 Aligned_cols=45 Identities=16% Similarity=0.118 Sum_probs=30.8
Q ss_pred cCceEEEeccc--cCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHH
Q 016295 250 KGKHTYVPVTK--KGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPV 302 (392)
Q Consensus 250 ~g~l~~~p~~~--~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 302 (392)
+|.....|+.. ...|.+. |.||.- .+...+++|||++.+++|...
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~~ 50 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTP-----GQDFYLLFDTGSSDTWVPHKG 50 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTT-----TEEEEEEEETTCCCCEEEBTT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCC-----CcEEEEEEcCCCCCeEECCCC
Confidence 46677778764 4566554 567731 233579999999999998653
No 60
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=36.26 E-value=42 Score=30.42 Aligned_cols=45 Identities=18% Similarity=0.038 Sum_probs=29.8
Q ss_pred CceEEE-eccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHH
Q 016295 251 GKHTYV-PVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVV 303 (392)
Q Consensus 251 g~l~~~-p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 303 (392)
|.+... |...+..|.+. |.||. +.+...+++|||++.+++|...+
T Consensus 3 ~~v~~~~~~~~~~~Y~~~---i~iGT-----P~Q~~~v~~DTGSs~lWv~~~~C 48 (329)
T 1oew_A 3 GSATTTPIDSLDDAYITP---VQIGT-----PAQTLNLDFDTGSSDLWVFSSET 48 (329)
T ss_dssp EEEEEEESSTTCCCEEEE---EEETT-----TTEEEEEEEETTCCCEEECBTTS
T ss_pred ceeEeeecCCCCCEEEEE---EEECC-----CCeEEEEEECCCCCCeEEecCCC
Confidence 344555 55556667654 67773 12345799999999999996543
No 61
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=35.01 E-value=45 Score=30.20 Aligned_cols=46 Identities=15% Similarity=0.053 Sum_probs=30.2
Q ss_pred CceEEE-eccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHHHH
Q 016295 251 GKHTYV-PVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVT 304 (392)
Q Consensus 251 g~l~~~-p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~ 304 (392)
|.+... |...+..|.+. |.||.- .+...+++|||++.+++|...+.
T Consensus 3 ~~v~~~~~~~~~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~~C~ 49 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYITS---VSIGTP-----AQVLPLDFDTGSSDLWVFSSETP 49 (329)
T ss_dssp EEEEEEESSTTCCCEEEE---EEETTT-----TEEEEEEEETTCCCEEECBTTSC
T ss_pred cceeeecCCCCCCEEEEE---EEECCC-----CeEEEEEEcCCCCCeEEecCCCC
Confidence 445555 55555666654 677731 23457999999999999975443
No 62
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=32.84 E-value=51 Score=29.76 Aligned_cols=44 Identities=16% Similarity=0.060 Sum_probs=28.4
Q ss_pred CceEEEeccccCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHH
Q 016295 251 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPV 302 (392)
Q Consensus 251 g~l~~~p~~~~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 302 (392)
|.+.-.+......|.+. |.||. +.+...+++|||++.+++|...
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iGT-----P~q~~~v~~DTGSs~lWv~~~~ 47 (325)
T 2apr_A 4 GTVPMTDYGNDIEYYGQ---VTIGT-----PGKKFNLDFDTGSSDLWIASTL 47 (325)
T ss_dssp TEEEEEEETTTTEEEEE---EEETT-----TTEEEEEEEETTCCCCEEEBTT
T ss_pred CceeeeecCCCCEEEEE---EEECC-----CCeEEEEEEcCCCCCEEEccCC
Confidence 34444444455566554 56773 1233579999999999998643
No 63
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=32.38 E-value=67 Score=27.39 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=27.3
Q ss_pred eeeceecCCceEEE---EEEEcCC----CceEEEEeccCCCceEEeCC
Q 016295 74 ILPLKNFMDAQYFG---EIGIGSP----PQNFSVIFDTGSSNLWVPSS 114 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~---~i~iGtP----~q~~~v~~DTGSs~~wv~~~ 114 (392)
.+|+.. ...|.+ .|+||.- .....+++|||++.+++|..
T Consensus 92 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 92 YLNVTR--KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEECSS--BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEECcc--ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 456654 234544 5778862 24578999999999999864
No 64
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=29.43 E-value=66 Score=27.15 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=26.0
Q ss_pred eEEEEEEEcCCCceEEEEeccCCCceEEeCCCC
Q 016295 84 QYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (392)
Q Consensus 84 ~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~C 116 (392)
.-.+++.||. |.+.+++|||..++-+...+.
T Consensus 112 rP~~~iki~G--q~~e~LlDTGAD~TVl~~~~l 142 (203)
T 3ka2_A 112 RPLVTIRIGG--QLKEALLDTGADDTVIEELNL 142 (203)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEECSCCC
T ss_pred CCcEEEEECC--EEEeeeecccCCceeeecccC
Confidence 4567899998 999999999999999965544
No 65
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=28.79 E-value=36 Score=30.72 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=27.9
Q ss_pred ceEEEeccc--cCceEEEeceEEEcceeeeeecCCeeEEEeCCCCCcccCHHH
Q 016295 252 KHTYVPVTK--KGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPV 302 (392)
Q Consensus 252 ~l~~~p~~~--~~~w~v~~~~i~v~~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 302 (392)
+....|+.. +..|.+. |.||.- .+...+++|||++.+++|...
T Consensus 2 ~~~~~~l~n~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~~ 46 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFGK---IYLGTP-----PQEFTVLFDTGSSDFWVPSIY 46 (323)
T ss_dssp CCEEEEEEEETTTEEEEE---EEETTT-----TEEEEEEEETTCCCEEEEBTT
T ss_pred CcceeeeEeccCCEEEEE---EEECCC-----CeEEEEEEeCCccceEEcCCC
Confidence 444556643 3455554 567742 234579999999999998643
No 66
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=25.44 E-value=97 Score=28.80 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=28.2
Q ss_pred eeeceecCCceEEE---EEEEcCC----CceEEEEeccCCCceEEeCC
Q 016295 74 ILPLKNFMDAQYFG---EIGIGSP----PQNFSVIFDTGSSNLWVPSS 114 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~---~i~iGtP----~q~~~v~~DTGSs~~wv~~~ 114 (392)
.+|+.. ...|.+ .|+||.- .....+++|||++.+++|..
T Consensus 235 ~~pv~~--~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~ 280 (383)
T 2x0b_A 235 YINLIK--TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 280 (383)
T ss_dssp EEEBSS--TTSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHH
T ss_pred EEEcCC--CceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHH
Confidence 466654 344555 5788873 25678999999999999864
No 67
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=24.91 E-value=43 Score=30.38 Aligned_cols=40 Identities=25% Similarity=0.372 Sum_probs=27.5
Q ss_pred eeeceecCCceEEE---EEEEcCC---CceEEEEeccCCCceEEeCCC
Q 016295 74 ILPLKNFMDAQYFG---EIGIGSP---PQNFSVIFDTGSSNLWVPSSK 115 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~---~i~iGtP---~q~~~v~~DTGSs~~wv~~~~ 115 (392)
.+|+.. ...|.+ .|+||.- .....+++|||++.+++|...
T Consensus 186 ~~p~~~--~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~ 231 (330)
T 1yg9_A 186 YVPLVG--DDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKAY 231 (330)
T ss_dssp EEEBSC--TTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHHH
T ss_pred EEECCC--CCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHHH
Confidence 466653 344545 4788862 234679999999999998653
No 68
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=24.60 E-value=76 Score=30.58 Aligned_cols=39 Identities=21% Similarity=0.325 Sum_probs=27.8
Q ss_pred eeeceecCCceEEEE---EEEcC-----CCceEEEEeccCCCceEEeCC
Q 016295 74 ILPLKNFMDAQYFGE---IGIGS-----PPQNFSVIFDTGSSNLWVPSS 114 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~wv~~~ 114 (392)
.+|+.. ...|.++ |.||. +.....+++|||++.+++|..
T Consensus 224 ~~pv~~--~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 224 YVPVTQ--KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred EEeccC--CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 466654 2456554 78875 234678999999999999854
No 69
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=23.68 E-value=99 Score=28.56 Aligned_cols=39 Identities=23% Similarity=0.403 Sum_probs=26.2
Q ss_pred eeeceecCCceEEEE--EEEcCCC-ceEEEEeccCCCceEEeCC
Q 016295 74 ILPLKNFMDAQYFGE--IGIGSPP-QNFSVIFDTGSSNLWVPSS 114 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~~--i~iGtP~-q~~~v~~DTGSs~~wv~~~ 114 (392)
.+|+.+ ...|.++ |+||.-. ....+++|||++.+++|..
T Consensus 232 ~~p~~~--~~~w~v~l~i~v~g~~~~~~~aiiDSGTs~~~lP~~ 273 (375)
T 1miq_A 232 YEKLNH--DLYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSE 273 (375)
T ss_dssp EEEBSS--SSSSEEEEEEEETTEEEEEEEEEECTTBSSEEECHH
T ss_pred EEecCC--CceEEEEEEEEECCEEcccceEEecCCCccEEcCHH
Confidence 466654 2344444 7787611 2467999999999999864
No 70
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=23.46 E-value=79 Score=30.23 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=26.7
Q ss_pred eeeceecCCceEEE--EEEEcCC-CceEEEEeccCCCceEEeCCC
Q 016295 74 ILPLKNFMDAQYFG--EIGIGSP-PQNFSVIFDTGSSNLWVPSSK 115 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~--~i~iGtP-~q~~~v~~DTGSs~~wv~~~~ 115 (392)
.+|+.+. ..|.+ +|+||.- .....+++|||++.+++|...
T Consensus 307 ~~pv~~~--~~w~v~l~I~Vgg~~~~~~~aiiDSGTt~i~lP~~~ 349 (451)
T 3qvc_A 307 YEKLNHD--LMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEF 349 (451)
T ss_dssp EEECSST--TSSEEEEEEEETTEEEEEEEEEECTTBSSEEECHHH
T ss_pred EEEcccC--CeeEEEEEEEECCccCCCceEEEeCCCccccCCHHH
Confidence 4666542 33333 3667752 246779999999999998654
No 71
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=21.71 E-value=1.4e+02 Score=26.66 Aligned_cols=43 Identities=21% Similarity=0.341 Sum_probs=29.5
Q ss_pred cceeeceecCCceEEE---EEEEcCCC---ceEEEEeccCCCceEEeCCCC
Q 016295 72 EDILPLKNFMDAQYFG---EIGIGSPP---QNFSVIFDTGSSNLWVPSSKC 116 (392)
Q Consensus 72 ~~~~~l~~~~~~~Y~~---~i~iGtP~---q~~~v~~DTGSs~~wv~~~~C 116 (392)
...+|+.. ...|.+ .|+||.-. ....+++|||++.+++|....
T Consensus 179 l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~~ 227 (324)
T 1am5_A 179 IHWIPVTA--EKYWQVALDGITVNGQTAACEGCQAIVDTGTSKIVAPVSAL 227 (324)
T ss_dssp CEEEEEEE--ETTEEEEECEEEETTEECCCCCEEEEECTTCSSEEECTTTH
T ss_pred eEEEecCC--CcEEEEEEeEEEECCceeeccCceEEEecCCccEECCHHHH
Confidence 34567765 245655 57888621 117899999999999997643
No 72
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=21.57 E-value=1.3e+02 Score=27.68 Aligned_cols=42 Identities=24% Similarity=0.241 Sum_probs=29.5
Q ss_pred cceeeceecCCceEEE---EEEEcCC----CceEEEEeccCCCceEEeCCC
Q 016295 72 EDILPLKNFMDAQYFG---EIGIGSP----PQNFSVIFDTGSSNLWVPSSK 115 (392)
Q Consensus 72 ~~~~~l~~~~~~~Y~~---~i~iGtP----~q~~~v~~DTGSs~~wv~~~~ 115 (392)
...+|+... ..|.+ .|+||.- .+...+++|||++.+++|...
T Consensus 223 l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~~~~~aiiDTGTs~~~lP~~~ 271 (370)
T 3psg_A 223 LNWVPVSVE--GYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTSA 271 (370)
T ss_dssp CEEEECSEE--TTEEEEECEEESSSSEEECTTCEEEEECTTCCSEEEEHHH
T ss_pred ceeeccccc--ceeEEEEeEEEECCEEEecCCCceEEEcCCCCcEECCHHH
Confidence 446777653 44555 4778762 245789999999999998653
No 73
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=20.64 E-value=1.5e+02 Score=26.52 Aligned_cols=40 Identities=30% Similarity=0.380 Sum_probs=28.2
Q ss_pred eeeceecCCceEEE---EEEEcCC-----CceEEEEeccCCCceEEeCCC
Q 016295 74 ILPLKNFMDAQYFG---EIGIGSP-----PQNFSVIFDTGSSNLWVPSSK 115 (392)
Q Consensus 74 ~~~l~~~~~~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~wv~~~~ 115 (392)
.+|+.. ...|.+ .|+||.- .....+++|||++.+++|...
T Consensus 182 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~ 229 (329)
T 1htr_B 182 WAPVTQ--ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQY 229 (329)
T ss_dssp EEEBCS--SSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGG
T ss_pred EEECCC--CceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHH
Confidence 456654 344555 5788862 345789999999999999754
Done!