Query 016296
Match_columns 392
No_of_seqs 235 out of 495
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 11:12:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4t_W RPN10, 26S proteasome r 100.0 3.9E-78 1.4E-82 583.1 22.3 251 1-252 1-253 (268)
2 2x5n_A SPRPN10, 26S proteasome 100.0 8.9E-46 3E-50 339.7 22.5 189 2-192 1-189 (192)
3 1yx4_A 26S proteasome non-ATPa 99.9 8.9E-27 3E-31 201.5 9.9 103 208-341 23-125 (132)
4 1jey_B KU80; double-strand DNA 99.8 1.2E-20 4E-25 197.5 16.1 161 4-164 8-217 (565)
5 3ibs_A Conserved hypothetical 99.8 8.3E-19 2.8E-23 158.1 20.8 163 5-180 13-202 (218)
6 1atz_A VON willebrand factor; 99.7 3.5E-15 1.2E-19 132.5 17.3 157 5-175 7-169 (189)
7 1shu_X Anthrax toxin receptor 99.7 9E-16 3.1E-20 134.3 12.8 163 5-184 8-174 (182)
8 1ijb_A VON willebrand factor; 99.6 6.3E-15 2.2E-19 133.2 18.5 160 5-175 15-180 (202)
9 1q0p_A Complement factor B; VO 99.6 9.6E-15 3.3E-19 131.4 17.4 162 5-176 17-205 (223)
10 1jey_A KU70; double-strand DNA 99.6 4.8E-15 1.6E-19 156.7 16.6 145 4-148 36-209 (609)
11 2xgg_A Microneme protein 2; A/ 99.6 1E-14 3.5E-19 129.1 16.0 137 5-148 19-163 (178)
12 3n2n_F Anthrax toxin receptor 99.6 6.7E-15 2.3E-19 129.1 12.0 154 5-175 9-168 (185)
13 4hqo_A Sporozoite surface prot 99.6 3E-14 1E-18 134.6 17.1 147 5-160 20-176 (266)
14 4hqf_A Thrombospondin-related 99.6 2.9E-14 9.8E-19 135.2 16.2 163 5-176 23-195 (281)
15 1mf7_A Integrin alpha M; cell 99.6 5.5E-15 1.9E-19 131.6 10.4 159 5-175 7-174 (194)
16 2b2x_A Integrin alpha-1; compu 99.6 1.2E-13 4.2E-18 126.0 19.2 162 5-176 24-197 (223)
17 4fx5_A VON willebrand factor t 99.6 1.3E-13 4.4E-18 141.5 21.1 147 5-163 79-234 (464)
18 1v7p_C Integrin alpha-2; snake 99.6 2.4E-13 8.3E-18 121.9 19.8 133 5-146 8-147 (200)
19 1n3y_A Integrin alpha-X; alpha 99.6 1.5E-14 5.1E-19 128.4 11.1 160 5-175 11-178 (198)
20 2x31_A Magnesium-chelatase 60 99.5 7.5E-16 2.6E-20 136.4 0.8 149 4-162 6-164 (189)
21 1pt6_A Integrin alpha-1; cell 99.5 2E-13 6.9E-18 123.6 16.1 170 5-184 9-189 (213)
22 1rrk_A Complement factor B; BB 99.5 3.6E-13 1.2E-17 135.9 16.3 160 5-175 3-190 (497)
23 2odp_A Complement C2; C3/C5 co 99.4 6.5E-13 2.2E-17 134.9 14.1 163 5-176 11-199 (509)
24 3hrz_D Complement factor B; se 99.4 2.8E-12 9.6E-17 135.5 14.6 161 5-176 245-433 (741)
25 3zqk_A VON willebrand factor; 99.3 1.6E-11 5.5E-16 110.5 14.5 139 5-159 23-168 (199)
26 1mjn_A Integrin alpha-L; rossm 99.2 7.4E-11 2.5E-15 104.5 11.0 129 5-148 4-138 (179)
27 3k6s_A Integrin alpha-X; cell 99.2 3.7E-11 1.3E-15 134.7 9.7 160 5-175 132-299 (1095)
28 1yvr_A RO autoantigen, 60-kDa 98.8 1.2E-08 4.1E-13 106.0 10.2 129 5-148 370-505 (538)
29 2ww8_A RRGA, cell WALL surface 98.7 5.3E-08 1.8E-12 107.4 10.5 112 5-117 226-389 (893)
30 2nvo_A RO sixty-related protei 98.5 8.9E-07 3E-11 92.3 14.4 129 5-148 364-501 (535)
31 3rag_A Uncharacterized protein 98.5 2.8E-07 9.4E-12 87.8 8.8 88 5-99 136-226 (242)
32 2nut_A Protein transport prote 98.5 8.4E-07 2.9E-11 96.4 13.5 163 5-184 134-390 (769)
33 2iue_A Pactolus I-domain; memb 98.4 9.1E-06 3.1E-10 75.9 15.3 166 5-184 5-205 (212)
34 1pcx_A Protein transport prote 98.2 1E-05 3.4E-10 88.5 13.8 148 5-163 189-404 (810)
35 1m2o_A SEC23, protein transpor 98.1 2.2E-05 7.5E-10 85.3 13.2 146 5-163 123-366 (768)
36 1m2v_B SEC24, protein transpor 98.1 1.9E-05 6.6E-10 87.5 12.8 148 5-163 305-520 (926)
37 2klz_A Ataxin-3; UIM, ubiquiti 97.7 6.7E-06 2.3E-10 59.9 1.1 40 291-342 4-43 (52)
38 3fcs_B Integrin beta-3; beta p 97.7 0.00032 1.1E-08 75.5 13.7 160 5-177 113-337 (690)
39 3eh2_A Protein transport prote 97.7 0.0005 1.7E-08 74.8 14.8 151 5-164 175-390 (766)
40 3eh1_A Protein transport prote 97.6 0.00072 2.5E-08 73.4 15.6 147 5-163 162-368 (751)
41 3efo_B SEC24 related gene fami 97.6 0.00048 1.6E-08 75.0 13.0 151 5-164 179-394 (770)
42 3k6s_B Integrin beta-2; cell r 97.4 0.00021 7.1E-09 77.0 7.4 158 5-176 106-326 (687)
43 3vi3_B Integrin beta-1; beta p 97.3 0.0051 1.8E-07 63.3 15.7 159 5-177 124-344 (454)
44 3t3p_B Integrin beta-3; integr 97.1 0.0068 2.3E-07 62.6 14.8 160 5-177 113-337 (472)
45 3v4v_B Integrin beta-7; cell a 96.9 0.013 4.5E-07 61.0 14.8 159 5-177 134-356 (503)
46 1p9c_A 26S proteasome non-ATPa 96.9 0.00033 1.1E-08 50.4 1.6 21 321-341 17-37 (45)
47 3rag_A Uncharacterized protein 96.8 0.0036 1.2E-07 59.5 8.4 73 105-184 8-83 (242)
48 1q0v_A Hydrophilic protein; ha 95.8 0.0047 1.6E-07 49.6 2.7 51 291-341 9-70 (81)
49 2klz_A Ataxin-3; UIM, ubiquiti 94.4 0.021 7.2E-07 41.6 2.6 21 289-309 22-42 (52)
50 1q0v_A Hydrophilic protein; ha 93.5 0.014 4.9E-07 46.8 0.2 21 218-238 6-26 (81)
51 1yx4_A 26S proteasome non-ATPa 93.2 0.038 1.3E-06 48.0 2.3 93 209-308 28-124 (132)
52 3a1q_C Ubiquitin interaction m 91.9 0.16 5.5E-06 35.7 3.7 14 292-305 30-43 (45)
53 2rr9_C Putative uncharacterize 91.4 0.23 7.9E-06 35.1 4.0 16 292-307 27-42 (46)
54 3a1q_C Ubiquitin interaction m 82.7 0.35 1.2E-05 34.0 0.7 19 322-340 3-21 (45)
55 3qhp_A Type 1 capsular polysac 82.1 6.1 0.00021 32.4 8.5 25 218-242 121-145 (166)
56 2rr9_C Putative uncharacterize 81.8 0.35 1.2E-05 34.2 0.5 18 323-340 1-18 (46)
57 1p9c_A 26S proteasome non-ATPa 77.9 1.2 4E-05 31.9 2.2 18 291-308 19-36 (45)
58 2jjm_A Glycosyl transferase, g 66.7 20 0.0007 33.6 8.7 127 108-241 211-354 (394)
59 2f9f_A First mannosyl transfer 65.3 10 0.00035 31.9 5.7 48 107-160 22-70 (177)
60 2iw1_A Lipopolysaccharide core 61.5 31 0.0011 31.6 8.7 76 107-190 195-274 (374)
61 3c48_A Predicted glycosyltrans 60.6 59 0.002 30.7 10.7 79 107-190 242-329 (438)
62 4grd_A N5-CAIR mutase, phospho 58.7 45 0.0015 30.0 8.8 65 106-174 11-75 (173)
63 3kuu_A Phosphoribosylaminoimid 56.4 41 0.0014 30.3 8.2 62 109-174 14-75 (174)
64 3fni_A Putative diflavin flavo 56.0 18 0.00062 30.8 5.7 42 106-147 3-44 (159)
65 2d3g_P Ubiquitin interacting m 55.4 7.6 0.00026 24.6 2.2 17 225-241 5-21 (26)
66 3ors_A N5-carboxyaminoimidazol 54.8 47 0.0016 29.6 8.2 62 108-173 4-65 (163)
67 2x6q_A Trehalose-synthase TRET 54.4 58 0.002 30.6 9.5 83 107-189 230-318 (416)
68 3rg8_A Phosphoribosylaminoimid 53.5 63 0.0022 28.6 8.8 52 109-164 4-55 (159)
69 1rzu_A Glycogen synthase 1; gl 53.4 54 0.0019 31.6 9.3 78 108-190 291-369 (485)
70 3u7r_A NADPH-dependent FMN red 53.1 23 0.00078 31.6 6.0 66 108-175 3-76 (190)
71 1xmp_A PURE, phosphoribosylami 53.0 48 0.0016 29.7 8.0 65 106-174 10-74 (170)
72 2a5l_A Trp repressor binding p 52.1 14 0.00047 31.7 4.3 40 108-147 6-45 (200)
73 3oow_A Phosphoribosylaminoimid 51.6 97 0.0033 27.6 9.7 63 109-175 7-69 (166)
74 3f6r_A Flavodoxin; FMN binding 51.6 15 0.0005 30.3 4.2 40 108-147 2-41 (148)
75 1o4v_A Phosphoribosylaminoimid 51.1 66 0.0023 29.2 8.7 66 105-174 11-76 (183)
76 3okp_A GDP-mannose-dependent a 50.9 43 0.0015 30.8 7.8 48 108-159 198-248 (394)
77 3k1y_A Oxidoreductase; structu 50.8 20 0.00068 31.9 5.2 44 104-147 8-59 (191)
78 1f4p_A Flavodoxin; electron tr 50.5 13 0.00045 30.4 3.8 40 108-147 1-40 (147)
79 1ydg_A Trp repressor binding p 50.1 17 0.00059 31.7 4.6 40 108-147 7-46 (211)
80 3hly_A Flavodoxin-like domain; 49.9 17 0.00059 30.9 4.5 40 109-148 2-41 (161)
81 3d3k_A Enhancer of mRNA-decapp 49.4 27 0.00092 32.8 6.1 39 108-148 86-124 (259)
82 2qzs_A Glycogen synthase; glyc 49.0 65 0.0022 31.1 9.0 79 107-190 291-370 (485)
83 3lp6_A Phosphoribosylaminoimid 48.1 43 0.0015 30.2 6.9 51 109-163 9-59 (174)
84 1u11_A PURE (N5-carboxyaminoim 48.0 60 0.002 29.4 7.9 62 109-174 23-84 (182)
85 1jzt_A Hypothetical 27.5 kDa p 47.5 31 0.0011 32.1 6.2 56 90-147 36-96 (246)
86 8abp_A L-arabinose-binding pro 45.5 1.1E+02 0.0039 27.1 9.6 113 23-147 108-234 (306)
87 2ki0_A DS119; beta-alpha-beta, 45.4 8.3 0.00028 25.6 1.3 21 121-141 13-33 (36)
88 3d3j_A Enhancer of mRNA-decapp 45.2 28 0.00094 33.6 5.6 39 108-148 133-171 (306)
89 3b6i_A Flavoprotein WRBA; flav 45.1 22 0.00076 30.4 4.5 39 109-147 3-42 (198)
90 3trh_A Phosphoribosylaminoimid 44.3 90 0.0031 27.9 8.4 51 109-163 8-58 (169)
91 4b4k_A N5-carboxyaminoimidazol 43.4 1.4E+02 0.0047 27.1 9.4 61 110-174 25-85 (181)
92 3fro_A GLGA glycogen synthase; 42.3 46 0.0016 31.1 6.6 53 109-163 252-310 (439)
93 2o8n_A APOA-I binding protein; 41.5 43 0.0015 31.7 6.2 55 90-146 59-116 (265)
94 2db7_A Hairy/enhancer-OF-split 40.9 19 0.00066 27.2 3.0 26 360-385 31-56 (64)
95 2iuy_A Avigt4, glycosyltransfe 40.4 29 0.001 31.7 4.8 51 107-163 161-211 (342)
96 3tem_A Ribosyldihydronicotinam 40.2 31 0.0011 31.4 4.9 41 107-147 1-43 (228)
97 2gek_A Phosphatidylinositol ma 40.0 89 0.0031 28.8 8.2 49 109-162 209-261 (406)
98 2q62_A ARSH; alpha/beta, flavo 39.4 33 0.0011 31.7 5.0 69 105-175 32-107 (247)
99 2amj_A Modulator of drug activ 39.3 42 0.0014 29.7 5.5 45 104-148 9-59 (204)
100 2lta_A De novo designed protei 45.4 6.3 0.00022 31.8 0.0 48 108-163 3-50 (110)
101 2ark_A Flavodoxin; FMN, struct 37.4 37 0.0013 29.2 4.7 40 108-147 5-45 (188)
102 2vzf_A NADH-dependent FMN redu 36.3 31 0.0011 30.0 4.1 40 108-147 3-45 (197)
103 2fzv_A Putative arsenical resi 35.9 36 0.0012 32.4 4.7 68 106-175 57-132 (279)
104 2lnd_A De novo designed protei 35.7 76 0.0026 25.5 5.8 54 106-163 50-103 (112)
105 2zki_A 199AA long hypothetical 34.1 36 0.0012 29.2 4.1 39 108-147 5-43 (199)
106 3qbr_A SJA, sjchgc06286 protei 33.6 14 0.00047 33.6 1.3 30 355-385 36-66 (179)
107 2hna_A Protein MIOC, flavodoxi 33.0 48 0.0016 27.2 4.5 35 109-143 3-37 (147)
108 5nul_A Flavodoxin; electron tr 32.2 26 0.00088 28.3 2.7 39 110-148 1-39 (138)
109 1bvy_F Protein (cytochrome P45 32.0 29 0.00099 30.8 3.1 41 106-146 20-60 (191)
110 4fid_A G protein alpha subunit 31.7 3.6E+02 0.012 26.0 12.8 82 4-98 186-274 (340)
111 3hp4_A GDSL-esterase; psychrot 31.6 1.6E+02 0.0055 24.0 7.7 67 111-178 5-77 (185)
112 2kln_A Probable sulphate-trans 31.6 1.3E+02 0.0045 24.1 6.9 41 108-148 48-92 (130)
113 3c8f_A Pyruvate formate-lyase 31.3 64 0.0022 28.0 5.3 52 109-161 71-122 (245)
114 3igf_A ALL4481 protein; two-do 31.1 1.3E+02 0.0045 29.5 8.1 113 7-143 127-249 (374)
115 3sc4_A Short chain dehydrogena 31.1 92 0.0031 28.4 6.6 70 85-158 123-208 (285)
116 2fz5_A Flavodoxin; alpha/beta 31.0 47 0.0016 26.3 4.1 38 110-147 2-39 (137)
117 1cip_A Protein (guanine nucleo 30.5 3.3E+02 0.011 26.3 10.7 101 4-118 218-326 (353)
118 1t5b_A Acyl carrier protein ph 30.2 45 0.0015 28.4 4.0 40 108-147 2-46 (201)
119 3hr4_A Nitric oxide synthase, 30.1 44 0.0015 30.7 4.1 59 87-148 22-80 (219)
120 3rss_A Putative uncharacterize 29.4 66 0.0023 33.1 5.7 55 90-147 36-90 (502)
121 3ced_A Methionine import ATP-b 29.3 1.1E+02 0.0036 24.3 5.8 25 121-145 74-98 (98)
122 2llw_A Heat shock protein STI1 28.3 25 0.00086 27.0 1.8 52 323-386 7-63 (71)
123 2f6i_A ATP-dependent CLP prote 27.6 82 0.0028 28.6 5.5 38 108-146 69-106 (215)
124 4amg_A Snogd; transferase, pol 27.5 39 0.0013 31.6 3.4 50 89-144 9-58 (400)
125 2bfw_A GLGA glycogen synthase; 27.3 1.5E+02 0.0052 24.4 6.8 52 109-162 37-94 (200)
126 3r6w_A FMN-dependent NADH-azor 27.3 60 0.0021 28.4 4.4 40 108-147 2-46 (212)
127 2qip_A Protein of unknown func 26.5 1.2E+02 0.0042 25.8 6.1 24 123-146 119-143 (165)
128 3e03_A Short chain dehydrogena 26.5 1.2E+02 0.0043 27.3 6.6 60 85-146 120-196 (274)
129 2ywx_A Phosphoribosylaminoimid 26.1 2E+02 0.0068 25.4 7.4 49 110-162 2-50 (157)
130 3p2l_A ATP-dependent CLP prote 26.0 84 0.0029 28.3 5.2 65 79-147 33-99 (201)
131 2cby_A ATP-dependent CLP prote 25.6 1.2E+02 0.0042 27.0 6.2 39 106-145 56-94 (208)
132 3qwd_A ATP-dependent CLP prote 25.1 99 0.0034 27.9 5.5 66 79-146 30-95 (203)
133 1t0i_A YLR011WP; FMN binding p 24.6 85 0.0029 26.7 4.8 39 108-146 1-47 (191)
134 3mcu_A Dipicolinate synthase, 24.6 62 0.0021 29.5 4.0 36 107-143 5-40 (207)
135 2hpv_A FMN-dependent NADH-azor 24.4 61 0.0021 28.0 3.8 38 108-145 2-45 (208)
136 3vue_A GBSS-I, granule-bound s 24.1 1E+02 0.0035 31.4 6.0 55 106-162 325-380 (536)
137 3ju3_A Probable 2-oxoacid ferr 23.6 1.5E+02 0.0052 23.9 6.0 39 122-160 25-63 (118)
138 3qjg_A Epidermin biosynthesis 23.5 67 0.0023 28.5 3.9 34 108-143 6-39 (175)
139 1zcb_A G alpha I/13; GTP-bindi 23.5 3.7E+02 0.013 26.0 9.7 51 4-58 226-278 (362)
140 3sho_A Transcriptional regulat 22.9 1E+02 0.0034 26.1 4.9 37 121-162 25-61 (187)
141 1sqs_A Conserved hypothetical 22.8 62 0.0021 29.0 3.7 39 109-147 3-44 (242)
142 3p0r_A Azoreductase; structura 22.6 92 0.0031 27.6 4.7 40 108-147 5-50 (211)
143 3oy2_A Glycosyltransferase B73 22.6 1.5E+02 0.0052 27.6 6.5 58 107-164 183-245 (413)
144 3lwa_A Secreted thiol-disulfid 22.5 1.9E+02 0.0065 23.8 6.5 55 108-163 60-122 (183)
145 1ur4_A Galactanase; hydrolase, 22.5 4.3E+02 0.015 26.1 10.1 63 83-151 84-168 (399)
146 2wte_A CSA3; antiviral protein 22.4 4.5E+02 0.015 24.0 9.7 74 105-180 32-107 (244)
147 2x6q_A Trehalose-synthase TRET 22.3 88 0.003 29.4 4.8 42 106-147 39-81 (416)
148 2jgn_A DBX, DDX3, ATP-dependen 22.0 1.3E+02 0.0046 25.6 5.6 48 107-159 46-93 (185)
149 4f21_A Carboxylesterase/phosph 21.9 4.2E+02 0.014 23.5 9.2 104 24-144 108-221 (246)
150 4h0c_A Phospholipase/carboxyle 21.9 1.6E+02 0.0054 25.5 6.1 36 109-144 153-189 (210)
151 1o2d_A Alcohol dehydrogenase, 21.7 2.8E+02 0.0096 26.7 8.4 39 125-164 58-96 (371)
152 3can_A Pyruvate-formate lyase- 21.5 1E+02 0.0036 25.9 4.7 49 110-161 6-54 (182)
153 2q9u_A A-type flavoprotein; fl 21.4 2.3E+02 0.008 26.9 7.7 41 107-147 256-296 (414)
154 2d1z_A Endo-1,4-beta-D-xylanas 21.2 82 0.0028 31.2 4.5 53 83-144 147-204 (436)
155 2dt9_A Aspartokinase; protein- 21.1 79 0.0027 26.9 3.8 37 110-146 97-133 (167)
156 3zqu_A Probable aromatic acid 21.0 1.1E+02 0.0038 27.8 5.0 35 107-143 4-38 (209)
157 3svl_A Protein YIEF; E. coli C 21.0 31 0.001 30.5 1.2 67 107-175 4-81 (193)
158 1ykg_A SIR-FP, sulfite reducta 20.9 47 0.0016 28.1 2.3 39 108-146 10-48 (167)
159 4gi5_A Quinone reductase; prot 20.9 1.2E+02 0.0042 28.6 5.4 43 106-148 21-65 (280)
160 3fvw_A Putative NAD(P)H-depend 20.9 82 0.0028 27.4 4.0 65 108-175 3-76 (192)
161 1g63_A Epidermin modifying enz 20.7 63 0.0022 28.7 3.2 34 108-143 3-36 (181)
162 1umd_B E1-beta, 2-OXO acid deh 20.5 1.7E+02 0.0059 27.6 6.5 49 122-175 214-262 (324)
163 2pd2_A Hypothetical protein ST 20.5 1.5E+02 0.005 23.0 5.1 54 86-143 12-68 (108)
164 3jx9_A Putative phosphoheptose 20.4 1.1E+02 0.0038 27.0 4.7 37 105-144 76-112 (170)
165 1b0z_A Protein (phosphoglucose 20.4 3.2E+02 0.011 27.5 8.7 90 83-176 81-176 (445)
166 4f8x_A Endo-1,4-beta-xylanase; 20.4 1.8E+02 0.0062 28.2 6.6 62 83-148 151-216 (335)
167 2rb4_A ATP-dependent RNA helic 20.3 90 0.0031 26.2 4.0 33 106-143 33-65 (175)
168 1xzo_A BSSCO, hypothetical pro 20.2 2.6E+02 0.0088 22.5 6.8 53 109-162 36-94 (174)
169 3kij_A Probable glutathione pe 20.1 2.6E+02 0.0088 23.1 6.9 39 123-161 58-99 (180)
170 1y7p_A Hypothetical protein AF 20.0 1.7E+02 0.0058 27.3 6.0 38 105-145 143-180 (223)
No 1
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-78 Score=583.12 Aligned_cols=251 Identities=48% Similarity=0.751 Sum_probs=189.9
Q ss_pred CCcceEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHHHHHHhhcccc
Q 016296 1 MVLEATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLGKILACMHELD 80 (392)
Q Consensus 1 m~lEa~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~i~ 80 (392)
|||||||||||+|.||+++||.||||+++++|++.|++.|+++||+++||||+|+|+.+.|++|||+|+++|+.+||+++
T Consensus 1 m~lEAtViviD~S~SM~~~D~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~~vl~plT~D~~~il~aL~~l~ 80 (268)
T 4b4t_W 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDTQ 80 (268)
T ss_dssp CCCEEEEEEECCSSTTSSTTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCEEEEEEESCHHHHHHHHTTCC
T ss_pred CCceeEEEEEECCHHHhCCCCCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcceeccCCcchHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHH
Q 016296 81 IGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLA 160 (392)
Q Consensus 81 ~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~ 160 (392)
++|.++|.+||++|+++||||+++++++|||||++|+.+++++++++++|++||+||+|+|||||+.. .|.++|++|++
T Consensus 81 ~~G~T~l~~gL~~A~~aLk~~~~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgFG~~~-~n~~kLe~l~~ 159 (268)
T 4b4t_W 81 IEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIE-QNTELLDEFIA 159 (268)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEESSCC-SSCCHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHhcccCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEeCCCc-cchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 79999999999
Q ss_pred HHcC--CCCceEEEecCCChhhhhhhhcCCcccCCCCCCCchhHHHHhhhcCCCCCCccCCCCCCCHHHHHHHHhcHHHH
Q 016296 161 AVNN--NDSSHLVHVPTGPNALSDVLISSPVFTADGEGGSGFAAAAAAAAAGGVSDFDFGVDPNIDPELALALRVSMEEE 238 (392)
Q Consensus 161 ~vn~--~d~Sh~v~vp~g~~lLsD~l~sspi~~~~~~~~~~~~~~~~~~~~~~~~~~efgvDp~~DPELa~Alr~SlEEe 238 (392)
++|+ +++||||+||||+++|||.|++|||+.|++.++.+++++++|++++++++|||||||++|||||||||||||||
T Consensus 160 ~~Ng~~~~~s~~v~v~~g~~~lsd~l~~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~dpela~alr~s~eee 239 (268)
T 4b4t_W 160 AVNNPQEETSHLLTVTPGPRLLYENIASSPIILEEGSSGMGAFGGSGGDSDANGTFMDFGVDPSMDPELAMALRLSMEEE 239 (268)
T ss_dssp HHCSSTTTSCEEEEECCCSSCHHHHHHTSTTSCCCCC-------------------------------------------
T ss_pred HhcCCCCCceeEEEeCCCCccHHHHHhcCCccccCCccccccccccccccccCCcccccCCCCCCCHHHHHHHHHhHHHH
Confidence 9998 57999999999999999999999999998743333222333444556678999999999999999999999999
Q ss_pred HHHHHHHHHHhhhh
Q 016296 239 RARQEAAAKRAADE 252 (392)
Q Consensus 239 ~~rq~~~~~~~~~~ 252 (392)
|+|||++++++.+.
T Consensus 240 ~~rq~~~~~~~~~~ 253 (268)
T 4b4t_W 240 QQRQERLRQQQQQQ 253 (268)
T ss_dssp --------------
T ss_pred HHHHHHHhhccccc
Confidence 99999998776543
No 2
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.9e-46 Score=339.68 Aligned_cols=189 Identities=50% Similarity=0.798 Sum_probs=179.9
Q ss_pred CcceEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHHHHHHhhccccc
Q 016296 2 VLEATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLGKILACMHELDI 81 (392)
Q Consensus 2 ~lEa~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~i~~ 81 (392)
|+|++|||||+|.||+++||.||||+++++++..|+..|+++||+++||||+|+|+.+++++|||.|+.+++.+|+.+.+
T Consensus 1 ~~e~lvlvlD~S~SM~~~D~~psRl~~ak~~~~~~~~~~~~~~~~d~vGLV~fa~~~a~~~~plT~d~~~i~~~L~~l~~ 80 (192)
T 2x5n_A 1 VLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDLPV 80 (192)
T ss_dssp CCEEEEEEECCSGGGGCTTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCCEEEEEESCHHHHHHHHTTCCC
T ss_pred CceEEEEEEECCHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEEcCCCcEEecCCCCCHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999999999999999999999999997689999999999999999999999
Q ss_pred CCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHH
Q 016296 82 GGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAA 161 (392)
Q Consensus 82 ~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~ 161 (392)
+|+++|+.||++|...|||++++.+++|||||++++.+++++++.++++++|++||+|+||+||++. .|.+ |+.|+++
T Consensus 81 ~g~t~l~~aL~~A~~~l~~~~~~~~~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~-~~~~-l~~la~~ 158 (192)
T 2x5n_A 81 RGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQ-NESA-LQHFIDA 158 (192)
T ss_dssp CSCCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC----CH-HHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhccccCCCceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCC-ccHH-HHHHHHh
Confidence 9999999999999999999887888999999999988888999999999999999999999999998 6878 9999999
Q ss_pred HcCCCCceEEEecCCChhhhhhhhcCCcccC
Q 016296 162 VNNNDSSHLVHVPTGPNALSDVLISSPVFTA 192 (392)
Q Consensus 162 vn~~d~Sh~v~vp~g~~lLsD~l~sspi~~~ 192 (392)
+|++++|||++||+++++|+|.|++|||+.|
T Consensus 159 ~n~~~~s~~~~~~~~~~~l~d~~~~s~~~~~ 189 (192)
T 2x5n_A 159 ANSSDSCHLVSIPPSPQLLSDLVNQSPIGQG 189 (192)
T ss_dssp HCSTTCCEEEEECCCSSCHHHHHHTSTTSCC
T ss_pred ccCCCceEEEEecCcchhHHHHHhcCccccc
Confidence 9999999999999999999999999999985
No 3
>1yx4_A 26S proteasome non-ATPase regulatory subunit 4; polyubiquitin, UIM, hydrolase; NMR {Homo sapiens} PDB: 1yx5_A 1yx6_A 2kde_A 2kdf_A
Probab=99.94 E-value=8.9e-27 Score=201.47 Aligned_cols=103 Identities=45% Similarity=0.604 Sum_probs=74.7
Q ss_pred hcCCCCCCccCCCCCCCHHHHHHHHhcHHHHHHHHHHHHHHhhhhhcccCCCCCCccCccccccccCCCCCccccccCCC
Q 016296 208 AAGGVSDFDFGVDPNIDPELALALRVSMEEERARQEAAAKRAADEASRQGKEEEPLSNSQDATMTDNTNNTAAETTEKTA 287 (392)
Q Consensus 208 ~~~~~~~~efgvDp~~DPELa~Alr~SlEEe~~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (392)
.+.|+++|+|||||++||||||||||||||||+||+++++++...++. .. + .++ .
T Consensus 23 ~~~~~~~fefgvDp~~DPeLa~ALr~Smeee~~Rqe~~~~~~~e~saa----~~----~-~a~--------~-------- 77 (132)
T 1yx4_A 23 LGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAAASAA----EA----G-IAT--------T-------- 77 (132)
T ss_dssp SCCCSSSCCSCSCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----SS----S-SSC--------C--------
T ss_pred cccCccccccCCCCCcCHHHHHHHHHhHHHHHHHHHHHHHhhcccccc----cc----c-ccc--------c--------
Confidence 345667899999999999999999999999999999998876554321 00 0 000 0
Q ss_pred CCCCChHHHHHHHHhhccCCCCCCCCCcccCCCCCCChHHHHHHHHHcccCCCC
Q 016296 288 DPMDEEKSLLERAFAMSMGTSVSDTSMADADTSKATDEDKELALALQMSMQDDT 341 (392)
Q Consensus 288 ~~~~~e~~~L~~Al~~S~~~~~~~~~~~~~~~~~~~~ee~~ia~A~~ms~~~~~ 341 (392)
...++++++|++++.++-... +. ..++ +.|+||++|++|||||||+..
T Consensus 78 ~~~~~eeamL~~a~~~~~~~~---~~--~~d~-~~MtEEeqLa~ALqMSMQe~~ 125 (132)
T 1yx4_A 78 GTEDSDDALLKMTISQQEFGR---TG--LPDL-SSMTEEEQIAYAMQMSLQGAE 125 (132)
T ss_dssp CCCSCHHHHHHHHHHHHHHHH---SS--CCCS-TTSCHHHHHHHHHHHSSSSCS
T ss_pred CCcccHHHHHHHhhcccccCC---CC--CCch-hhCChHHHHHHHHHhcccccc
Confidence 022578899999987663222 11 2233 689999999999999999764
No 4
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=99.84 E-value=1.2e-20 Score=197.53 Aligned_cols=161 Identities=14% Similarity=0.284 Sum_probs=137.6
Q ss_pred ceEEEEEeCCccccCCCC-CCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCC-------------ceEEECCCCCH
Q 016296 4 EATMICIDNSEWMRNGDY-SPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKG-------------VRVLTTPTTDL 69 (392)
Q Consensus 4 Ea~~IvIDnSesMrngD~-~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~-------------~~vlvtlT~D~ 69 (392)
|++|||||+|.||.++|+ .||||+++++++..|++.|...+|.++||||+|++.. ..++.+|+...
T Consensus 8 e~iv~~iDvS~SM~~~d~~~~srl~~ak~~i~~~i~~ki~~~~~D~vGlv~f~~~~~~~plt~d~~y~~i~vl~~l~~~~ 87 (565)
T 1jey_B 8 AAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSGGDQYQNITVHRHLMLPD 87 (565)
T ss_dssp EEEEEEEECCGGGGCCBTTBCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCTTTCSTTEEEEEEEECCC
T ss_pred eEEEEEEECChHhcccCCCCCCcHHHHHHHHHHHHHHHhcCCCCCEEEEEEEccCCCCCccccccCCCceEEeecCCCCC
Confidence 999999999999999999 8999999999999999999989999999999999864 23667777667
Q ss_pred HHHHHhhcc-cccC-CcCcHHHHHHHHHHHhccc--CCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEE-EEEe
Q 016296 70 GKILACMHE-LDIG-GEMNIAAGIQVAQLALKHR--QNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAID-IVNF 144 (392)
Q Consensus 70 ~kil~~L~~-i~~~-G~~sL~~gL~vA~laLkhr--~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~Vd-iI~f 144 (392)
.+++..|+. +.++ ++++|..||.+|...|+++ ..|..++|||+|+++....+..++.++|+.|+++||.|+ ||||
T Consensus 88 ~~~l~~l~~~l~~~~~~t~i~~al~~A~~~l~~~~~~~k~~~krIiLlTDg~~~~~~~~~~~~a~~l~~~gI~i~~vig~ 167 (565)
T 1jey_B 88 FDLLEDIESKIQPGSQQADFLDALIVSMDVIQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPF 167 (565)
T ss_dssp HHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHSSSSCCSEEEEEEECCCCSCCCCTTHHHHHHHHHHTTEEEEEEESS
T ss_pred HHHHHHHHhhccCCCccccHHHHHHHHHHHHHHHhhcccccccEEEEEeCCCCCCCHHHHHHHHHHHHhcCcEEEEEecc
Confidence 788889998 7776 6899999999999999987 334467899999976655567789999999999999999 9999
Q ss_pred CCCCC------------------------------CcHHHHHHHHHHHcC
Q 016296 145 GEDDD------------------------------GKPEKLEALLAAVNN 164 (392)
Q Consensus 145 G~e~~------------------------------~n~~~l~~~~~~vn~ 164 (392)
|.... .|...|+.|++.++|
T Consensus 168 g~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~e~~L~~ia~~~~G 217 (565)
T 1jey_B 168 SLGKEDGSGDRGDGPFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEG 217 (565)
T ss_dssp CCC----------CCCCTTCSSCCCCTTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCcccccccccccccccccccchhccccchhhhHHHHHHHHHhcCC
Confidence 87520 245569999999876
No 5
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=8.3e-19 Score=158.15 Aligned_cols=163 Identities=16% Similarity=0.189 Sum_probs=135.5
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHHHHHHhhccccc---
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLGKILACMHELDI--- 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~i~~--- 81 (392)
.++||||.|.||...|+.|+||+.++.++..|+..+ |..+||||+|++. +.+++++|.|+..+...|..+.+
T Consensus 13 ~iv~vlD~SgSM~~~d~~~~r~~~ak~~~~~~~~~~----~~~~v~lv~F~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~ 87 (218)
T 3ibs_A 13 EVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDEL----DNDKVGMIVFAGD-AFTQLPITSDYISAKMFLESISPSLI 87 (218)
T ss_dssp EEEEEEECSGGGGCCSSSSCHHHHHHHHHHHHHHTC----SSCEEEEEEESSS-EEEEEEEESCHHHHHHHHHTCCGGGC
T ss_pred cEEEEEECCcCcccccCCcCHHHHHHHHHHHHHHhC----CCCeEEEEEECCC-ceEeCCCCCCHHHHHHHHHhcCcccC
Confidence 589999999999999999999999999999999864 5889999999987 69999999999999999999876
Q ss_pred -CCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCC------------
Q 016296 82 -GGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDD------------ 148 (392)
Q Consensus 82 -~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~------------ 148 (392)
.|++++..||..|...|+.+ +..++.||+|.++..+.+ ++..+++.+++.+|+|++||||...
T Consensus 88 ~~g~T~l~~al~~a~~~l~~~--~~~~~~ivllTDG~~~~~--~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~ 163 (218)
T 3ibs_A 88 SKQGTAIGEAINLATRSFTPQ--EGVGRAIIVITDGENHEG--GAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDY 163 (218)
T ss_dssp CSCSCCHHHHHHHHHTTSCSC--SSCCEEEEEEECCTTCCS--CHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCB
T ss_pred CCCCCcHHHHHHHHHHHHhhC--CCCCcEEEEEcCCCCCCC--cHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCce
Confidence 68999999999999888764 346666777777754433 6889999999999999999999852
Q ss_pred -----------CCcHHHHHHHHHHHcCCCCceEEEecCCChhh
Q 016296 149 -----------DGKPEKLEALLAAVNNNDSSHLVHVPTGPNAL 180 (392)
Q Consensus 149 -----------~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~lL 180 (392)
..|...|+.+++.++ .+|+.+......+
T Consensus 164 ~~~~~g~~~~~~~~~~~L~~iA~~~g----G~~~~~~~~~~~~ 202 (218)
T 3ibs_A 164 RRDREGNVIVTRLNEGMCQEIAKDGK----GIYVRVDNSNSAQ 202 (218)
T ss_dssp CBCTTSCBCEECCCHHHHHHHHHHTE----EEEEEECSSSHHH
T ss_pred eEcCCCCEeEecCCHHHHHHHHHhcC----CEEEECCCChHHH
Confidence 157889999998775 3455555533334
No 6
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=99.65 E-value=3.5e-15 Score=132.54 Aligned_cols=157 Identities=12% Similarity=0.182 Sum_probs=123.4
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECC--CCCHHHHHHhhccccc-
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTP--TTDLGKILACMHELDI- 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtl--T~D~~kil~~L~~i~~- 81 (392)
.++|+||.|.||. ++||+.++.++..|+..+.-.....+||||+|++. +.+..++ +.|+..+..+|..+..
T Consensus 7 div~vlD~SgSm~-----~~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f~~~-~~~~~~l~~~~~~~~~~~~i~~l~~~ 80 (189)
T 1atz_A 7 DVILLLDGSSSFP-----ASYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSI-TTIDVPWNVVPEKAHLLSLVDVMQRE 80 (189)
T ss_dssp EEEEEEECSSSSC-----HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSS-EEEEECTTCCCCHHHHHHHHHTCCCC
T ss_pred eEEEEEeCCCCCC-----hhhHHHHHHHHHHHHHhcCcCCCCeEEEEEEECCc-ceEEEecCCCCCHHHHHHHHHhCcCC
Confidence 5899999999996 48999999999999998643445689999999876 6889998 8999999999999975
Q ss_pred CCcCcHHHHHHHHHHHhcccC---CCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHH
Q 016296 82 GGEMNIAAGIQVAQLALKHRQ---NKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEAL 158 (392)
Q Consensus 82 ~G~~sL~~gL~vA~laLkhr~---~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~ 158 (392)
+|++++..||..|...|.... .+..++++|||+++..+. ++...++.+++.||.|++||+|... |.+.|+.+
T Consensus 81 ~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~vivltdg~~~~---~~~~~~~~~~~~gi~v~~igvG~~~--~~~~L~~i 155 (189)
T 1atz_A 81 GGPSQIGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSVD---SVDAAADAARSNRVTVFPIGIGDRY--DAAQLRIL 155 (189)
T ss_dssp CCCCCHHHHHHHHHHHHHSCCTTCCTTSEEEEEEEECSCCSS---CCHHHHHHHHHTTEEEEEEEESSSS--CHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHhccccCCCCCCCcEEEEEeCCCCCc---hHHHHHHHHHHCCCEEEEEEcCCcC--CHHHHHHH
Confidence 788999999999998876421 122344466666554332 3678899999999999999999865 56788888
Q ss_pred HHHHcCCCCceEEEecC
Q 016296 159 LAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 159 ~~~vn~~d~Sh~v~vp~ 175 (392)
.... .+.|+..+..
T Consensus 156 A~~~---~~~~~~~~~~ 169 (189)
T 1atz_A 156 AGPA---GDSNVVKLQR 169 (189)
T ss_dssp TGGG---GGGGCEEESS
T ss_pred HCCC---cccCEEEecC
Confidence 6433 3467777754
No 7
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=99.65 E-value=9e-16 Score=134.28 Aligned_cols=163 Identities=17% Similarity=0.186 Sum_probs=119.4
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHHHHHHhhcccc---c
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLGKILACMHELD---I 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~i~---~ 81 (392)
.++|+||.|.||...++ +|+...+.++..| .. |..+||||+|++. +.++.++|.++..+...|..+. +
T Consensus 8 dvv~vlD~SgSM~~~~~--~~~~~~~~~~~~~----~~--~~~~v~lv~f~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~ 78 (182)
T 1shu_X 8 DLYFVLDKSGSVANNWI--EIYNFVQQLAERF----VS--PEMRLSFIVFSSQ-ATIILPLTGDRGKISKGLEDLKRVSP 78 (182)
T ss_dssp EEEEEEECSGGGGGGHH--HHHHHHHHHHHHC----CC--TTEEEEEEEESSS-EEEEEEEECCHHHHHHHHHHHHTCCC
T ss_pred eEEEEEECCCCcccCHH--HHHHHHHHHHHHh----cC--CCceEEEEEeCCC-ceEEECCCCCHHHHHHHHHhcccCCC
Confidence 58999999999986432 3555555555444 32 7899999999887 6899999999999888877654 8
Q ss_pred CCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCC-hhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHH
Q 016296 82 GGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYD-RKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLA 160 (392)
Q Consensus 82 ~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d-~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~ 160 (392)
+|++++..||..|...|+....+..++.||+|.++..+.+ +..+...++.+++.+|.|++||||. .+...|+.+..
T Consensus 79 ~g~T~~~~al~~a~~~l~~~~~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~---~~~~~L~~ia~ 155 (182)
T 1shu_X 79 VGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLD---FEQAQLERIAD 155 (182)
T ss_dssp CSCCCHHHHHHHHHHHHHHHTGGGSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSS---CCHHHHHHHSS
T ss_pred CCCchHHHHHHHHHHHHHhccCCCCCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCc---CCHHHHHHHhC
Confidence 9999999999999999977543456677777777755443 3456788999999999999999994 35677877764
Q ss_pred HHcCCCCceEEEecCCChhhhhhh
Q 016296 161 AVNNNDSSHLVHVPTGPNALSDVL 184 (392)
Q Consensus 161 ~vn~~d~Sh~v~vp~g~~lLsD~l 184 (392)
.. .|...+..+..-|.+++
T Consensus 156 ~~-----~~~~~~~~~~~~L~~~~ 174 (182)
T 1shu_X 156 SK-----EQVFPVKGGFQALKGII 174 (182)
T ss_dssp SG-----GGEEESSSTTHHHHHHH
T ss_pred CC-----CceEEccCCHHHHHHHH
Confidence 32 23444443433455543
No 8
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=99.65 E-value=6.3e-15 Score=133.15 Aligned_cols=160 Identities=8% Similarity=0.070 Sum_probs=123.8
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCC--CCHHHHHHhhcccccC
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPT--TDLGKILACMHELDIG 82 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT--~D~~kil~~L~~i~~~ 82 (392)
.++|+||.|.||. +++|+.+++++..|++.+.-..+..+||||+|++. +.+..+++ .++..++..|.++...
T Consensus 15 divfvlD~SgSm~-----~~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs~~-~~~~~~l~~~~~~~~~~~~i~~l~~~ 88 (202)
T 1ijb_A 15 DLVFLLDGSSRLS-----EAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYHDG-SHAYIGLKDRKRPSELRRIASQVKYA 88 (202)
T ss_dssp EEEEEEECBTTSC-----HHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEESSS-EEEEECTTCCCCHHHHHHHHHTCCCC
T ss_pred cEEEEEECCCCCC-----HHHHHHHHHHHHHHHHhcccCCCceEEEEEEECCC-ceEEEecCCCCCHHHHHHHHHhCcCC
Confidence 4899999999996 46899999999999997654445789999999987 68999998 8899999999999764
Q ss_pred Cc--CcHHHHHHHHHHH-hcccCCCCCCcEEEEEEcCCCCC-ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHH
Q 016296 83 GE--MNIAAGIQVAQLA-LKHRQNKNQRQRIIVFAGSPVKY-DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEAL 158 (392)
Q Consensus 83 G~--~sL~~gL~vA~la-Lkhr~~k~~~~RIVvFvgSp~~~-d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~ 158 (392)
|+ +++..||+.|... |+....+..++.||||.++..+. ...++...++.||+.||.|++||||... |.+.|+.+
T Consensus 89 gg~~T~~~~aL~~a~~~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~~--~~~~L~~i 166 (202)
T 1ijb_A 89 GSQVASTSEVLKYTLFQIFSKIDRPEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHA--NLKQIRLI 166 (202)
T ss_dssp CBSCCCHHHHHHHHHHHTSSSCSCTTSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTS--CHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHHHhccCCCCCCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCcC--CHHHHHHH
Confidence 43 9999999999755 44221234556677777765433 2357889999999999999999999864 57789988
Q ss_pred HHHHcCCCCceEEEecC
Q 016296 159 LAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 159 ~~~vn~~d~Sh~v~vp~ 175 (392)
.... .+.|+..+..
T Consensus 167 A~~~---~~~~~~~~~~ 180 (202)
T 1ijb_A 167 EKQA---PENKAFVLSS 180 (202)
T ss_dssp HHHC---TTCCCEEESS
T ss_pred hCCC---CcccEEEeCC
Confidence 7532 2345555553
No 9
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.63 E-value=9.6e-15 Score=131.39 Aligned_cols=162 Identities=10% Similarity=0.161 Sum_probs=123.7
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEE----CCCCCHHHHHHhhcccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLT----TPTTDLGKILACMHELD 80 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlv----tlT~D~~kil~~L~~i~ 80 (392)
.++||||.|.||.. ++|+.+++++..|+..+...++..+||||+|++. +.+++ ++|.|...+..+|..+.
T Consensus 17 div~vlD~SgSM~~-----~~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~ 90 (223)
T 1q0p_A 17 NIYLVLDGSDSIGA-----SNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATY-PKIWVKVSEADSSNADWVTKQLNEIN 90 (223)
T ss_dssp EEEEEEECSTTTCH-----HHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESSS-EEEEECTTSGGGGCHHHHHHHHHTCC
T ss_pred eEEEEEeCCCCCch-----HHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCc-cceeeccccCCCCCHHHHHHHHHhcc
Confidence 57999999999975 4599999999999998887788899999999987 58888 56678889999999987
Q ss_pred c-----CCcCcHHHHHHHHHHHhcccCC------CCCCcEEEEEEcCCCCC--ChhhHHHHHHH----------HHhCCc
Q 016296 81 I-----GGEMNIAAGIQVAQLALKHRQN------KNQRQRIIVFAGSPVKY--DRKVMEMIGKK----------LKKNSV 137 (392)
Q Consensus 81 ~-----~G~~sL~~gL~vA~laLkhr~~------k~~~~RIVvFvgSp~~~--d~~~l~~~ak~----------LKknnI 137 (392)
+ +|++++..||+.|...|..... +..++.||+|.++..+. ++..+.+.++. +++.+|
T Consensus 91 ~~~~~~~g~T~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (223)
T 1q0p_A 91 YEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYL 170 (223)
T ss_dssp TTSCSCTTCCCHHHHHHHHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSCBTTBCCGGGE
T ss_pred cccccCCCCccHHHHHHHHHHHhhccccccccccccCCeEEEEECCCCCCCCCChHHHHHHHHHHHhhhhhhhhcccCCc
Confidence 5 6899999999999999875422 13445566666665553 56666665544 467899
Q ss_pred eEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCC
Q 016296 138 AIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTG 176 (392)
Q Consensus 138 ~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g 176 (392)
.|++||||... +...|+.+....+ +..|++.+...
T Consensus 171 ~i~~igvG~~~--~~~~L~~iA~~~~--G~~~~~~~~~~ 205 (223)
T 1q0p_A 171 DVYVFGVGPLV--NQVNINALASKKD--NEQHVFKVKDM 205 (223)
T ss_dssp EEEEEECSSCC--CHHHHHHHSCCCT--TCCCEEETTC-
T ss_pred EEEEEEecCcC--CHHHHHHHhcCCC--CCceEEEcCCH
Confidence 99999999865 4677888763221 12377777643
No 10
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=99.62 E-value=4.8e-15 Score=156.65 Aligned_cols=145 Identities=12% Similarity=0.162 Sum_probs=115.3
Q ss_pred ceEEEEEeCCccccCCC--CCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCc---------eEEECCC---CCH
Q 016296 4 EATMICIDNSEWMRNGD--YSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGV---------RVLTTPT---TDL 69 (392)
Q Consensus 4 Ea~~IvIDnSesMrngD--~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~---------~vlvtlT---~D~ 69 (392)
|++|||||+|.||.+.| ..||||+++++++..|++.+.-.+|...||||.|++... .++.+|+ .+.
T Consensus 36 e~ivf~IDvS~SM~~~d~~~~~srl~~a~~~v~~~i~~kii~~~~D~vGlVlfgt~~t~n~l~~d~i~v~~~L~~~~~~~ 115 (609)
T 1jey_A 36 DSLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKR 115 (609)
T ss_dssp EEEEEEEECSGGGGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCCTTEEEEEEEECCCHHH
T ss_pred eEEEEEEECCHHHcCCCCCCCCChHHHHHHHHHHHHHHhhCCCCCCeEEEEEEccCCCCCcCCCCCeEEEecCCCCCHHH
Confidence 78999999999999999 589999999999999999998899999999999999852 3555554 332
Q ss_pred HHHHHhhcc----------cccCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCCh-----hhHHHHHHHHHh
Q 016296 70 GKILACMHE----------LDIGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDR-----KVMEMIGKKLKK 134 (392)
Q Consensus 70 ~kil~~L~~----------i~~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~-----~~l~~~ak~LKk 134 (392)
-+.+..|.. +..+.+++|..||.+|...|+++..+..++|||||.++...... ..+..+|+.|++
T Consensus 116 ik~l~~l~~~~~~~~~~~~~g~~~~t~l~daL~~a~~~f~~~~~k~~~k~IiL~TDg~~p~~~~~~~~~~~~~~a~~l~~ 195 (609)
T 1jey_A 116 ILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRD 195 (609)
T ss_dssp HHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCSSCEEEEEEEEEESCSCTTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccchhhhhhcCCCCCCCHHHHHHHHHHHHHhhchhhcCCEEEEEcCCCCCCCCchHHHHHHHHHHHHHHh
Confidence 333333321 12235799999999999999986444457899999986554322 368899999999
Q ss_pred CCceEEEEEeCCCC
Q 016296 135 NSVAIDIVNFGEDD 148 (392)
Q Consensus 135 nnI~VdiI~fG~e~ 148 (392)
+||.|++|++|...
T Consensus 196 ~gI~i~~igig~~~ 209 (609)
T 1jey_A 196 TGIFLDLMHLKKPG 209 (609)
T ss_dssp HTEEEEEEEBCCTT
T ss_pred cCcEEEEEecCCCC
Confidence 99999999999864
No 11
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=99.62 E-value=1e-14 Score=129.06 Aligned_cols=137 Identities=11% Similarity=0.081 Sum_probs=109.7
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCC----CHHHHHHhhcccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTT----DLGKILACMHELD 80 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~----D~~kil~~L~~i~ 80 (392)
.++|+||.|.||. +++|+.+++++..|+..+-..++..+||||+|++. +.+.++++. +...++..|.++.
T Consensus 19 divfvlD~SgSm~-----~~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F~~~-~~~~~~l~~~~~~~~~~~~~~i~~l~ 92 (178)
T 2xgg_A 19 DICFLIDSSGSIG-----IQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTD-VHLQWDLQSPNAVDKQLAAHAVLDMP 92 (178)
T ss_dssp EEEEEEECCTTTC-----HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSS-EEEEECTTSGGGSCHHHHHHHHHHCC
T ss_pred eEEEEEECCCCCC-----HHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCc-eEEEEeCCCCCccCHHHHHHHHHhCC
Confidence 5899999999995 56899999999999998644456689999999987 689999997 7889999999987
Q ss_pred -cCCcCcHHHHHHHHHHHhccc---CCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 81 -IGGEMNIAAGIQVAQLALKHR---QNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 81 -~~G~~sL~~gL~vA~laLkhr---~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
.+|++++..||+.|...|... ..+..++.||+|.++..+ +..++..++++||+.+|.|++||||...
T Consensus 93 ~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~-~~~~~~~~~~~l~~~gi~v~~igvG~~~ 163 (178)
T 2xgg_A 93 YKKGSTNTSDGLKACKQILFTGSRPGREHVPKLVIGMTDGESD-SDFRTVRAAKEIRELGGIVTVLAVGHYV 163 (178)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHCCCTTCTTSCEEEEEEESSCCC-HHHHHSHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCCccHHHHHHHHHHHhcCcccCCCCCCCEEEEEEcCCCCC-CCccHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 788999999999999876321 113455667777666433 3456889999999999999999999986
No 12
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.59 E-value=6.7e-15 Score=129.06 Aligned_cols=154 Identities=16% Similarity=0.162 Sum_probs=115.7
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHHHHHHhhcccc---c
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLGKILACMHELD---I 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~i~---~ 81 (392)
.++|+||.|.||.. + |...++++..++..+ ..|..+||||+|++. ++++.++|.|...+..+|..+. +
T Consensus 9 div~vlD~SgSM~~-~-----~~~~~~~~~~~~~~~--~~~~~~v~lv~f~~~-~~~~~~l~~~~~~~~~~i~~l~~~~~ 79 (185)
T 3n2n_F 9 DLYFILDKSGSVLH-H-----WNEIYYFVEQLAHKF--ISPQLRMSFIVFSTR-GTTLMKLTEDREQIRQGLEELQKVLP 79 (185)
T ss_dssp EEEEEEECSGGGGG-G-----HHHHHHHHHHHHHHC--CCTTEEEEEEEESSS-EEEEEEEECCHHHHHHHHHHHHTCCC
T ss_pred eEEEEEeCCCChhh-h-----HHHHHHHHHHHHHHh--CCCCcEEEEEEEecC-ceEEeccCCCHHHHHHHHHHHhhhcC
Confidence 48999999999985 2 455566666666666 347899999999987 6999999999999988888874 6
Q ss_pred CCcCcHHHHHHHHHHHhcc--cCCCCCCcEEEEEEcCCCCCChh-hHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHH
Q 016296 82 GGEMNIAAGIQVAQLALKH--RQNKNQRQRIIVFAGSPVKYDRK-VMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEAL 158 (392)
Q Consensus 82 ~G~~sL~~gL~vA~laLkh--r~~k~~~~RIVvFvgSp~~~d~~-~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~ 158 (392)
+|++++..||+.|...|.. +..+..++.||+|.++..+.+.. .+...++.+++.+|.|++|||| . .|...|+.+
T Consensus 80 ~g~T~~~~al~~a~~~l~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg--~-~~~~~L~~i 156 (185)
T 3n2n_F 80 GGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK--D-FNETQLARI 156 (185)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTTCBCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS--S-CCHHHHTTT
T ss_pred CCCccHHHHHHHHHHHHhhccccCCCCCcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec--c-CCHHHHHHH
Confidence 8999999999999987732 22223445566666665433222 4578999999999999999999 3 466777776
Q ss_pred HHHHcCCCCceEEEecC
Q 016296 159 LAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 159 ~~~vn~~d~Sh~v~vp~ 175 (392)
.. ...|+..+..
T Consensus 157 A~-----~~~~~~~~~~ 168 (185)
T 3n2n_F 157 AD-----SKDHVFPVND 168 (185)
T ss_dssp SS-----SGGGEEEHHH
T ss_pred hC-----CCCCeEEecc
Confidence 52 2357777664
No 13
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=99.59 E-value=3e-14 Score=134.65 Aligned_cols=147 Identities=14% Similarity=0.146 Sum_probs=119.9
Q ss_pred eEEEEEeCCccccCCCCCCcHH-HHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCC----HHHHHHhhccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRL-RAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTD----LGKILACMHEL 79 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl-~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D----~~kil~~L~~i 79 (392)
.++|+||.|.||.. +.| ...++++..|+..+.-.++..+||||+|++. +.++++++.. ...++.+|..+
T Consensus 20 DivfvlD~SgSM~~-----~~~~~~~k~~~~~lv~~l~~~~~~~rvglv~Fs~~-~~~~~~l~~~~~~~~~~~~~~i~~l 93 (266)
T 4hqo_A 20 DLYLLVDGSGSIGY-----PNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSY-TTELIRLGSGQSIDKRQALSKVTEL 93 (266)
T ss_dssp EEEEEEECSTTTCH-----HHHHHTHHHHHHHHHHTCCBCTTSEEEEEEEESSS-EEEEECTTSHHHHCHHHHHHHHHHH
T ss_pred eEEEEEECCCCcCh-----hHHHHHHHHHHHHHHHHcccCCCCcEEEEEEecCC-cceEEecCCCCccCHHHHHHHHHHh
Confidence 47999999999964 445 4788999999998866678999999999987 6999999965 78889999988
Q ss_pred ----ccCCcCcHHHHHHHHHHHhccc-CCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHH
Q 016296 80 ----DIGGEMNIAAGIQVAQLALKHR-QNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEK 154 (392)
Q Consensus 80 ----~~~G~~sL~~gL~vA~laLkhr-~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~ 154 (392)
.++|.+++..||+.|...|+.+ ..+..++.||||.++..+ ++.++...++.|++.||.|++||||... +.+.
T Consensus 94 ~~~~~~~G~T~~~~AL~~a~~~l~~~~~r~~~~~~iIllTDG~~~-d~~~~~~~a~~l~~~gi~i~~iGiG~~~--~~~~ 170 (266)
T 4hqo_A 94 RKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPN-SKYRALEVANKLKQRNVRLAVIGIGQGI--NHQF 170 (266)
T ss_dssp HHHCCCCSCCCHHHHHHHHHHHHHTTCSCTTSEEEEEEEECSCCS-CHHHHHHHHHHHHHTTCEEEEEECSSSC--CHHH
T ss_pred hhccCCCCCCCHHHHHHHHHHHHhhccccCCCCeEEEEEccCCCC-CchHHHHHHHHHHHCCCEEEEEecCccc--CHHH
Confidence 6899999999999998888764 223445556666666433 6788999999999999999999999965 5677
Q ss_pred HHHHHH
Q 016296 155 LEALLA 160 (392)
Q Consensus 155 l~~~~~ 160 (392)
|+.+..
T Consensus 171 L~~iA~ 176 (266)
T 4hqo_A 171 NRLIAG 176 (266)
T ss_dssp HHHHHT
T ss_pred HHHhhC
Confidence 788764
No 14
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=99.58 E-value=2.9e-14 Score=135.23 Aligned_cols=163 Identities=13% Similarity=0.114 Sum_probs=123.0
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCC----HHHHHHhhcccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTD----LGKILACMHELD 80 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D----~~kil~~L~~i~ 80 (392)
.++|+||.|.||... +++..+++++..|+..+...+...+||||+|++. +.++++++.+ ...++.+|..+.
T Consensus 23 div~vlD~SgSM~~~----~~~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs~~-~~~~~~l~~~~~~~~~~l~~~i~~l~ 97 (281)
T 4hqf_A 23 DLYLLMDGSGSIRRH----NWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNN-AREIIRLHSDASKNKEKALIIIKSLL 97 (281)
T ss_dssp EEEEEEECCCCSSTH----HHHHHHHHHHHHHHTTCCCCTTSEEEEEEEEETT-EEEEEEECSSCSSCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCcCHH----HHHHHHHHHHHHHHHHhccCCCCcEEEEEEcCCC-ceEEEEccccCccCHHHHHHHHHHHh
Confidence 489999999999753 2348899999999998766666899999999987 5888888864 778888888875
Q ss_pred ----cCCcCcHHHHHHHHHHHhcccCC-CCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHH
Q 016296 81 ----IGGEMNIAAGIQVAQLALKHRQN-KNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKL 155 (392)
Q Consensus 81 ----~~G~~sL~~gL~vA~laLkhr~~-k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l 155 (392)
++|++++..||+.|...|..+.. ++.++.||||.++.. .++.++...++.|++.||.|++||||... +.+.|
T Consensus 98 ~~~~~~G~T~~~~aL~~a~~~l~~~~~r~~~~~~iillTDG~~-~d~~~~~~~~~~l~~~gv~i~~igiG~~~--~~~~L 174 (281)
T 4hqf_A 98 STNLPYGKTSLTDALLQVRKHLNDRINRENANQLVVILTDGIP-DSIQDSLKESRKLSDRGVKIAVFGIGQGI--NVAFN 174 (281)
T ss_dssp HTTGGGCSCCHHHHHHHHHHHHHTSCCCTTCEEEEEEEESSCC-SCHHHHHHHHHHHHHTTCEEEEEEESSSC--CHHHH
T ss_pred hccCCCCCccHHHHHHHHHHHHHhccCCCCCCEEEEEEecCCC-CCcHHHHHHHHHHHHCCCEEEEEeCCCcc--CHHHH
Confidence 68999999999999888765422 224455566655543 36778999999999999999999999975 56677
Q ss_pred HHHHHHHcCCCC-ceEEEecCC
Q 016296 156 EALLAAVNNNDS-SHLVHVPTG 176 (392)
Q Consensus 156 ~~~~~~vn~~d~-Sh~v~vp~g 176 (392)
+.+...-. .++ .|++.+..-
T Consensus 175 ~~iA~~~~-~~g~~~~~~~~~~ 195 (281)
T 4hqf_A 175 RFLVGCHP-SDGKCNLYADSAW 195 (281)
T ss_dssp HHHTTSCS-SSSCCTTEEEECG
T ss_pred HhhhCCCC-CCCCCceEEecch
Confidence 77753211 122 456666543
No 15
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=99.58 E-value=5.5e-15 Score=131.59 Aligned_cols=159 Identities=15% Similarity=0.164 Sum_probs=120.6
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCC--CHHHHHHhhccccc-
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTT--DLGKILACMHELDI- 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~--D~~kil~~L~~i~~- 81 (392)
.++|+||.|.||. +++|+.+++++..|+..+. ++..+||||+|++. +.++.++|. +...++.+|.++..
T Consensus 7 div~vlD~SgSm~-----~~~~~~~k~~~~~~~~~l~--~~~~~v~vv~f~~~-~~~~~~l~~~~~~~~~~~~i~~l~~~ 78 (194)
T 1mf7_A 7 DIAFLIDGSGSII-----PHDFRRMKEFVSTVMEQLK--KSKTLFSLMQYSEE-FRIHFTFKEFQNNPNPRSLVKPITQL 78 (194)
T ss_dssp EEEEEEECCTTSC-----HHHHHHHHHHHHHHHHHHC--CTTEEEEEEEESSS-EEEEECHHHHHHSCCHHHHHTTCCCC
T ss_pred eEEEEEeCCCCCC-----HHHHHHHHHHHHHHHHhcC--CCCeEEEEEEecCC-ceEEEecCCcCCHHHHHHHHHhCcCC
Confidence 5899999999996 4689999999999999865 56789999999876 688999886 45678888998874
Q ss_pred CCcCcHHHHHHHHHHHh-cccC--CCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCC---cHHHH
Q 016296 82 GGEMNIAAGIQVAQLAL-KHRQ--NKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDG---KPEKL 155 (392)
Q Consensus 82 ~G~~sL~~gL~vA~laL-khr~--~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~---n~~~l 155 (392)
+|++++..||+.|...| .... .+..++.||||.++..+.++..+.++++.+++.||+|++||||... + +.+.|
T Consensus 79 ~g~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~-~~~~~~~~L 157 (194)
T 1mf7_A 79 LGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAF-RSEKSRQEL 157 (194)
T ss_dssp CSCBCHHHHHHHHHHTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGG-CSHHHHHHH
T ss_pred CCCchHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccc-cccccHHHH
Confidence 89999999999998654 3211 1234556777777765545555677889999999999999999875 3 24566
Q ss_pred HHHHHHHcCCCCceEEEecC
Q 016296 156 EALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 156 ~~~~~~vn~~d~Sh~v~vp~ 175 (392)
+.+... +.+.|+..+..
T Consensus 158 ~~iA~~---~~~~~~~~~~~ 174 (194)
T 1mf7_A 158 NTIASK---PPRDHVFQVNN 174 (194)
T ss_dssp HHHSCS---SHHHHEEEESS
T ss_pred HHHhCC---CCcccEEEeCC
Confidence 665421 12357777764
No 16
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=99.57 E-value=1.2e-13 Score=126.04 Aligned_cols=162 Identities=12% Similarity=0.183 Sum_probs=117.6
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCC--CCHHHHHHhhcccccC
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPT--TDLGKILACMHELDIG 82 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT--~D~~kil~~L~~i~~~ 82 (392)
.++|+||.|.||.+ |+.+++++..|+..+.-.++..+||||+|++. +.++.+++ .+...++..|..+...
T Consensus 24 div~vlD~SgSM~~-------~~~~k~~~~~~~~~l~~~~~~~rv~lv~F~~~-~~~~~~l~~~~~~~~~~~~i~~l~~~ 95 (223)
T 2b2x_A 24 DIVIVLDGSNSIYP-------WESVIAFLNDLLKRMDIGPKQTQVGIVQYGEN-VTHEFNLNKYSSTEEVLVAANKIVQR 95 (223)
T ss_dssp EEEEEEECSTTCCC-------HHHHHHHHHHHHTTSCCSTTSCCEEEEEESSS-EEEEECTTTCCSHHHHHHHHTTCCCC
T ss_pred eEEEEEECCCChhh-------HHHHHHHHHHHHHhcccCCCCeEEEEEEeCCC-ccEEEecCCCCCHHHHHHHHHhhhcc
Confidence 47999999999983 88999999999987655678999999999877 68888886 4567888999988754
Q ss_pred -C-cCcHHHHHHHHHHH-hccc--CCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCc----HH
Q 016296 83 -G-EMNIAAGIQVAQLA-LKHR--QNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGK----PE 153 (392)
Q Consensus 83 -G-~~sL~~gL~vA~la-Lkhr--~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n----~~ 153 (392)
| .+++..||+.|... |+.. ..+..++.||+|.++..+ +..++..+++.+|+.||.|++||||... +. ..
T Consensus 96 gG~~T~~~~aL~~a~~~l~~~~~~~~~~~~~~iillTDG~~~-~~~~~~~~~~~~~~~gi~v~~igvG~~~-~~~~~~~~ 173 (223)
T 2b2x_A 96 GGRQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESH-DNYRLKQVIQDCEDENIQRFSIAILGHY-NRGNLSTE 173 (223)
T ss_dssp CCSSCCHHHHHHHHHHTTSSGGGTCCTTSEEEEEEEESSCCT-TGGGHHHHHHHHHTTTEEEEEEEECGGG-C---CCCH
T ss_pred CCCCccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCC-CCccHHHHHHHHHHCCCEEEEEEecCcc-ccccccch
Confidence 4 49999999999876 4411 113345556666666443 3447889999999999999999999864 21 11
Q ss_pred HHHHHHHHHcCC-CCceEEEecCC
Q 016296 154 KLEALLAAVNNN-DSSHLVHVPTG 176 (392)
Q Consensus 154 ~l~~~~~~vn~~-d~Sh~v~vp~g 176 (392)
.+....+.+-+. .+.|+..+...
T Consensus 174 ~~~~~L~~iA~~p~~g~~~~~~~~ 197 (223)
T 2b2x_A 174 KFVEEIKSIASEPTEKHFFNVSDE 197 (223)
T ss_dssp HHHHHHHTTSCSSGGGTEEEESST
T ss_pred hHHHHHHHHhCCCchhcEEEeCCH
Confidence 222333334333 34577777643
No 17
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=99.57 E-value=1.3e-13 Score=141.53 Aligned_cols=147 Identities=14% Similarity=0.148 Sum_probs=121.1
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCC--------CCHHHHHHhh
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPT--------TDLGKILACM 76 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT--------~D~~kil~~L 76 (392)
.++||||.|.||. +.++||+.++.++..|++. ..|..+||||+|.+. +.+++++| .+...++.+|
T Consensus 79 dvv~VLD~SGSM~---~~~~rl~~ak~a~~~ll~~---L~~~drv~lV~Fs~~-a~~~~p~t~~l~~~~~~~~~~l~~~I 151 (464)
T 4fx5_A 79 VEVIIIDCSGSMD---YPRTKMMAAKEATKVAIDT---LTDGAFFAVVAGTEG-ARVVYPTGGQLLRADYQSRAAAKEAV 151 (464)
T ss_dssp EEEEEEECCGGGG---TTTHHHHHHHHHHHHHHHH---SCTTCEEEEEEESSS-EEEEESSSSSCEECSHHHHHHHHHHH
T ss_pred eEEEEEEcCcccC---CCCchHHHHHHHHHHHHHh---CCCCCEEEEEEEcCc-eEEEecCCcccccCCHHHHHHHHHHH
Confidence 5899999999997 4589999999999999987 458889999999987 68999987 6888899999
Q ss_pred cccccCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCC-ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHH
Q 016296 77 HELDIGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKY-DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKL 155 (392)
Q Consensus 77 ~~i~~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~-d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l 155 (392)
..+.++|++++..||..|...|+.+ +...+.||+|.++..+. ++..+.... +..+.+|+|++||||... |...|
T Consensus 152 ~~L~~~GgT~l~~aL~~A~~~l~~~--~~~~~~IILLTDG~~~~~~~~~l~~~~-~a~~~~i~i~tiGiG~~~--d~~~L 226 (464)
T 4fx5_A 152 GRLHANGGTAMGRWLAQAGRIFDTA--PSAIKHAILLTDGKDESETPADLARAI-QSSIGNFTADCRGIGEDW--EPKEL 226 (464)
T ss_dssp HTCCCCSCCCHHHHHHHHHHHHTTC--TTSEEEEEEEESSCCTTSCHHHHHHHH-HHHTTTCEEEEEEESSSS--CHHHH
T ss_pred HcCCCCCCCcHHHHHHHHHHHHhcC--CCCCCEEEEEcCCCCCCCChHHHHHHH-HHhcCCCeEEEEEeCCcc--CHHHH
Confidence 9999999999999999999999874 34556777777776553 344444443 345789999999999875 57899
Q ss_pred HHHHHHHc
Q 016296 156 EALLAAVN 163 (392)
Q Consensus 156 ~~~~~~vn 163 (392)
+.+++.++
T Consensus 227 ~~IA~~tg 234 (464)
T 4fx5_A 227 RKIADALL 234 (464)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhCC
Confidence 99987663
No 18
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=99.56 E-value=2.4e-13 Score=121.91 Aligned_cols=133 Identities=11% Similarity=0.119 Sum_probs=106.8
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCC--CCHHHHHHhhcccccC
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPT--TDLGKILACMHELDIG 82 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT--~D~~kil~~L~~i~~~ 82 (392)
.++|+||.|.||.+ |+.+++++..|++.+.-.++..+||||+|++. +.+.+++| .+...++..|..+.+.
T Consensus 8 div~vlD~SgSm~~-------~~~~k~~~~~~~~~l~~~~~~~rvglv~f~~~-~~~~~~l~~~~~~~~~~~~i~~l~~~ 79 (200)
T 1v7p_C 8 DVVVVCDESNSIYP-------WDAVKNFLEKFVQGLDIGPTKTQVGLIQYANN-PRVVFNLNTYKTKEEMIVATSQTSQY 79 (200)
T ss_dssp EEEEEEECCTTCCC-------HHHHHHHHHHHHHTSCBSTTSEEEEEEEESSS-EEEEECTTTCSSHHHHHHHHHHCCCC
T ss_pred cEEEEEECCCCccc-------HHHHHHHHHHHHHhcCCCCCceEEEEEEECCC-ceEEEeCCCcCCHHHHHHHHHhhhcc
Confidence 58999999999973 88999999999998655567899999999987 68999998 4778899999998764
Q ss_pred -C-cCcHHHHHHHHHHH-hccc--CCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCC
Q 016296 83 -G-EMNIAAGIQVAQLA-LKHR--QNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 83 -G-~~sL~~gL~vA~la-Lkhr--~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~ 146 (392)
| .+++..||+.|... |+.. ..+..++.||+|.++..+ +...+...++.+|+.+|.|++||+|.
T Consensus 80 ~G~~T~~~~al~~a~~~~~~~~~g~r~~~~~~ivllTDG~~~-~~~~~~~~~~~~~~~gi~i~~igvg~ 147 (200)
T 1v7p_C 80 GGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESH-DGSMLKAVIDQCNHDNILRFGIAVLG 147 (200)
T ss_dssp CCSCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCCS-CGGGHHHHHHHHHHTTEEEEEEEECH
T ss_pred CCCCCcHHHHHHHHHHhhcccccCCCCCCCeEEEEEccCCCC-CcccHHHHHHHHHHCCCEEEEEEecc
Confidence 4 59999999999886 4421 112345556777766544 55667889999999999999999953
No 19
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.56 E-value=1.5e-14 Score=128.41 Aligned_cols=160 Identities=12% Similarity=0.123 Sum_probs=120.1
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCC--CHHHHHHhhcccc-c
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTT--DLGKILACMHELD-I 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~--D~~kil~~L~~i~-~ 81 (392)
.++|+||.|.||... +|...++++..|+..+. ++..+||||+|++. +.+..+++. +...++..|..+. +
T Consensus 11 div~vlD~SgSM~~~-----~~~~~~~~~~~~~~~l~--~~~~~v~lv~f~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~ 82 (198)
T 1n3y_A 11 DIVFLIDGSGSISSR-----NFATMMNFVRAVISQFQ--RPSTQFSLMQFSNK-FQTHFTFEEFRRSSNPLSLLASVHQL 82 (198)
T ss_dssp EEEEEEECCTTSCHH-----HHHHHHHHHHHHHTTSC--TTTEEEEEEEESSS-EEEEECHHHHHHCSSGGGGGTTCCCC
T ss_pred eEEEEEECCCCCCHH-----HHHHHHHHHHHHHHhcC--CCCcEEEEEEeCCC-ccEEEecCccCCHHHHHHHHhcCcCC
Confidence 589999999999864 45677888888888765 78999999999987 688888864 2245677777765 6
Q ss_pred CCcCcHHHHHHHHHHH-hcccC--CCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCC--CcHHHHH
Q 016296 82 GGEMNIAAGIQVAQLA-LKHRQ--NKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDD--GKPEKLE 156 (392)
Q Consensus 82 ~G~~sL~~gL~vA~la-Lkhr~--~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~--~n~~~l~ 156 (392)
+|++++..||+.|... |+... .+..++.||+|.++..+.++.++..+++.+++.+|.|++||||.... .+...|+
T Consensus 83 ~g~T~~~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~ 162 (198)
T 1n3y_A 83 QGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELN 162 (198)
T ss_dssp CSCBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHH
T ss_pred CCCchHHHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccccccccHHHHH
Confidence 8999999999999844 44311 13345567777777666566677888999999999999999998751 1467788
Q ss_pred HHHHHHcCCCCceEEEecC
Q 016296 157 ALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 157 ~~~~~vn~~d~Sh~v~vp~ 175 (392)
.++.. +++.|+..+..
T Consensus 163 ~iA~~---~~g~~~~~~~~ 178 (198)
T 1n3y_A 163 DIASK---PSQEHIFKVED 178 (198)
T ss_dssp HHSCS---SSGGGEEEESS
T ss_pred HHHcC---CCcccEEEeCC
Confidence 77633 34567666654
No 20
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=99.53 E-value=7.5e-16 Score=136.39 Aligned_cols=149 Identities=17% Similarity=0.288 Sum_probs=118.2
Q ss_pred ceEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHHHHHHhhcccccCC
Q 016296 4 EATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLGKILACMHELDIGG 83 (392)
Q Consensus 4 Ea~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~i~~~G 83 (392)
-.++||||.|.||. ++||..++.++..|+... .+|..+||||+|.+..+++++++|.+...+...|..+.++|
T Consensus 6 ~~vv~vlD~SgSM~-----~~~~~~~k~~~~~~~~~~--~~~~~~v~lv~f~~~~~~~~~~~~~~~~~~~~~i~~l~~~g 78 (189)
T 2x31_A 6 RVLIFAVDASGSAA-----VARLSEAKGAVELLLGRA--YAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGG 78 (189)
T ss_dssp CEEEEEEECCTTSC-----C--CHHHHHHHHHHHHHS--CTTTSCCCEEEESBSCCCBCTTTCSCHHHHHHHHHHCCCCB
T ss_pred eEEEEEEECCCCCC-----chHHHHHHHHHHHHHHHh--cCCCcEEEEEEECCCCceEecCCCCCHHHHHHHHhcCCCCC
Confidence 46899999999995 589999999999999764 37899999999998667899999999999999999999999
Q ss_pred cCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCCh----------hhHHHHHHHHHhCCceEEEEEeCCCCCCcHH
Q 016296 84 EMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDR----------KVMEMIGKKLKKNSVAIDIVNFGEDDDGKPE 153 (392)
Q Consensus 84 ~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~----------~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~ 153 (392)
++++..||..|...|+....+..++.||+|.++..+... ..+..+++.+++.+|.|++|+||... ..
T Consensus 79 ~T~~~~al~~a~~~l~~~~~~~~~~~ivliTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~ig~g~~~---~~ 155 (189)
T 2x31_A 79 GTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRP---NP 155 (189)
T ss_dssp CCCCHHHHHHHHHHHHTCTTTCSSEEEEECCBSCCSSCCTHHHHHGGGTCCCEEEEECTGGGGSCCTHHHHHHSS---CS
T ss_pred CCCHHHHHHHHHHHHHhccCCCCceEEEEECCCCCCCCCCccccccchhHHHHHHHHHHHHcCCeEEEEecCCCC---HH
Confidence 999999999999999765444456667777666544321 23445678889999999999999763 23
Q ss_pred HHHHHHHHH
Q 016296 154 KLEALLAAV 162 (392)
Q Consensus 154 ~l~~~~~~v 162 (392)
.|+.+++.+
T Consensus 156 ~L~~iA~~~ 164 (189)
T 2x31_A 156 ALVDLARTM 164 (189)
T ss_dssp SSCSTTTEE
T ss_pred HHHHHHHhc
Confidence 666666444
No 21
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=99.53 E-value=2e-13 Score=123.57 Aligned_cols=170 Identities=11% Similarity=0.161 Sum_probs=120.1
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCC--CCHHHHHHhhcccccC
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPT--TDLGKILACMHELDIG 82 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT--~D~~kil~~L~~i~~~ 82 (392)
.++|+||.|.||.+ |+.+++++..|+..+.-.++..+||||+|++. +.++.+++ .+...++..|..+.+.
T Consensus 9 div~vlD~SgSm~~-------~~~~k~~~~~~~~~l~~~~~~~~v~lv~F~~~-~~~~~~l~~~~~~~~~~~~i~~l~~~ 80 (213)
T 1pt6_A 9 DIVIVLDGSNSIYP-------WDSVTAFLNDLLKRMDIGPKQTQVGIVQYGEN-VTHEFNLNKYSSTEEVLVAAKKIVQR 80 (213)
T ss_dssp EEEEEEECCTTCCC-------HHHHHHHHHHHHTTSCBSTTSBEEEEEEESSS-EEEEECTTTCSSHHHHHHHHHTCCCC
T ss_pred cEEEEEECCCChhh-------HHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCC-ccEEEeccccCCHHHHHHHHHhccCC
Confidence 57999999999983 88999999999987654578999999999987 68889986 4567888899988764
Q ss_pred -C-cCcHHHHHHHHHHH-hccc--CCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCC---CcHHH
Q 016296 83 -G-EMNIAAGIQVAQLA-LKHR--QNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDD---GKPEK 154 (392)
Q Consensus 83 -G-~~sL~~gL~vA~la-Lkhr--~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~---~n~~~ 154 (392)
| .+++..||+.|... |+.. ..+..++.||+|.++..+. ..++..+++++|+.+|.|++||||.... .+...
T Consensus 81 ~G~~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~-~~~~~~~~~~~~~~gi~i~~igig~~~~~~~~~~~~ 159 (213)
T 1pt6_A 81 GGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHD-NHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEK 159 (213)
T ss_dssp CCSSCCHHHHHHHHHHTTTSGGGTCCTTCEEEEEEEESSCCSC-SHHHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHH
T ss_pred CCCcccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCC-CccHHHHHHHHHHCCCEEEEEEeccccccccccchh
Confidence 4 48999999999876 4411 1133555567776765444 4468889999999999999999997530 01112
Q ss_pred HHHHHHHHcCC-CCceEEEecCCChhhhhhh
Q 016296 155 LEALLAAVNNN-DSSHLVHVPTGPNALSDVL 184 (392)
Q Consensus 155 l~~~~~~vn~~-d~Sh~v~vp~g~~lLsD~l 184 (392)
+....+.+-+. .+.|+..+.... -|.+++
T Consensus 160 ~~~~L~~iA~~~~~g~~~~~~~~~-~l~~i~ 189 (213)
T 1pt6_A 160 FVEEIKSIASEPTEKHFFNVSDEL-ALVTIV 189 (213)
T ss_dssp HHHHHHHHSCSSHHHHEEEESSGG-GGGGGH
T ss_pred hHHHHHHHhCCCchhcEEEeCCHH-HHHHHH
Confidence 22333334333 346777776432 344433
No 22
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.49 E-value=3.6e-13 Score=135.88 Aligned_cols=160 Identities=10% Similarity=0.165 Sum_probs=121.2
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEE----CCCCCHHHHHHhhcccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLT----TPTTDLGKILACMHELD 80 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlv----tlT~D~~kil~~L~~i~ 80 (392)
.++|+||.|.||.. +||+.+++++..|+..+...++..+||||+|++. +++++ ++|.|...++..|..+.
T Consensus 3 div~vlD~SgSM~~-----~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~ 76 (497)
T 1rrk_A 3 NIYLVLDGSDSIGA-----SNFTGAKKVLVNLIEKVASYGVKPRYGLVTYATY-PKIWVKVSEADSSNADWVTKQLNEIN 76 (497)
T ss_dssp EEEEEEECSTTTCH-----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSS-EEEEECTTSGGGGCHHHHHHHHHHCC
T ss_pred eEEEEEECCCCcch-----hhHHHHHHHHHHHHHHhhccCCCceEEEEEecCC-ceEeeccccccccCHHHHHHHHHhCc
Confidence 47999999999965 8999999999999999877788899999999987 58888 77889999999999987
Q ss_pred -----cCCcCcHHHHHHHHHHHhcccCC------CCCCcEEEEEEcCCCCCChhhHHHHHHHHHhC-------------C
Q 016296 81 -----IGGEMNIAAGIQVAQLALKHRQN------KNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKN-------------S 136 (392)
Q Consensus 81 -----~~G~~sL~~gL~vA~laLkhr~~------k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKkn-------------n 136 (392)
++|++++..||+.|...|..+.. +..++.||||.++..+. ..+...+++.+++. +
T Consensus 77 ~~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (497)
T 1rrk_A 77 YEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNM-GGDPITVIDEIRDLLYIGKDRKNPREDY 155 (497)
T ss_dssp GGGSCCTTCCCHHHHHHHHHHHHCCC------CGGGCEEEEEEEECSCCCS-SSCTHHHHHHHHHHTTCSSCC-CCCGGG
T ss_pred CccccccCccCHHHHHHHHHHHhhhhhccccccccccceEEEEEeCCCccc-CCChhHHHHHHHHHhhhhcccccchhcC
Confidence 45799999999999999854321 22445566666665443 11344444444444 9
Q ss_pred ceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecC
Q 016296 137 VAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 137 I~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~ 175 (392)
|+|++||+|... +...|+.|+...+ +..|+..+..
T Consensus 156 i~v~~igvG~~~--~~~~L~~iA~~~~--g~~~~~~~~~ 190 (497)
T 1rrk_A 156 LDVYVFGVGPLV--NQVNINALASKKD--NEQHVCKVKD 190 (497)
T ss_dssp EEEEEEECSSSC--CHHHHHHHSCCCT--TCCCEEETTC
T ss_pred eeEEEecCCCcc--CHHHHHHHhcCCC--CcceEEEeCC
Confidence 999999999875 4678888864321 1237777764
No 23
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.44 E-value=6.5e-13 Score=134.85 Aligned_cols=163 Identities=14% Similarity=0.202 Sum_probs=122.8
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCC----CHHHHHHhhcccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTT----DLGKILACMHELD 80 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~----D~~kil~~L~~i~ 80 (392)
.+||+||.|.||.. ++|+.+++++..|++.+...++..+||||+|++. +++++++|. |...++.+|..+.
T Consensus 11 divfvlD~SgSM~~-----~~~~~~k~~~~~l~~~l~~~~~~~rv~lv~f~~~-~~~~~~l~~~~~~~~~~~~~~l~~l~ 84 (509)
T 2odp_A 11 NLYLLLDASQSVSE-----NDFLIFKESASLMVDRIFSFEINVSVAIITFASE-PKVLMSVLNDNSRDMTEVISSLENAN 84 (509)
T ss_dssp EEEEEEECSTTSCH-----HHHHHHHHHHHHHHHHHHTTCCCEEEEEEEESSS-EEEEECTTSGGGGCHHHHHHHHHTCC
T ss_pred eEEEEEeCCCccch-----hhHHHHHHHHHHHHHHhhccCCCceEEEEEccCC-CceeEeccCCCCCCHHHHHHHHHhcc
Confidence 47999999999974 4679999999999998876788999999999987 699999986 8999999999997
Q ss_pred cC-----CcCcHHHHHHHHHHHhcccCC---------CCCCcEEEEEEcCCCCC--ChhhHHHHHHHH------HhCCce
Q 016296 81 IG-----GEMNIAAGIQVAQLALKHRQN---------KNQRQRIIVFAGSPVKY--DRKVMEMIGKKL------KKNSVA 138 (392)
Q Consensus 81 ~~-----G~~sL~~gL~vA~laLkhr~~---------k~~~~RIVvFvgSp~~~--d~~~l~~~ak~L------KknnI~ 138 (392)
.. |++++..||+.|...|+.... +..++.||||.++..+. ++..+.+.++.+ ++.+|.
T Consensus 85 ~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 164 (509)
T 2odp_A 85 YKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLD 164 (509)
T ss_dssp GGGGTTCCSCCHHHHHHHHHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCCCSSSCTHHHHHHHHHHTTCCSTTGGGEE
T ss_pred cccCCCCCCccHHHHHHHHHHHHhhcccccccccccccccceEEEEECCCCccCCCChhHHHHHHHHHhhccccccCceE
Confidence 75 889999999999988854211 11334566666664443 333334444332 188999
Q ss_pred EEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCC
Q 016296 139 IDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTG 176 (392)
Q Consensus 139 VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g 176 (392)
|++||||... .+...|+.++... ++..|+..+...
T Consensus 165 i~~iGvG~~~-~~~~~L~~iA~~~--~G~~~~~~~~~~ 199 (509)
T 2odp_A 165 IYAIGVGKLD-VDWRELNELGSKK--DGERHAFILQDT 199 (509)
T ss_dssp EEEEEESSSC-CCHHHHHHHSCCC--TTCCCEEEESSH
T ss_pred EEEEEcCCCc-ccHHHHHhhccCC--CCceeeEEecCH
Confidence 9999999974 4678888887433 233477777654
No 24
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.38 E-value=2.8e-12 Score=135.54 Aligned_cols=161 Identities=12% Similarity=0.154 Sum_probs=123.1
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCC----CHHHHHHhhcccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTT----DLGKILACMHELD 80 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~----D~~kil~~L~~i~ 80 (392)
.++|+||.|.||.. ++|+.+++++..|++.+.......+||||+|++. +.+++++|. |...++.+|.++.
T Consensus 245 div~vlD~SgSM~~-----~~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f~~~-~~~~~~l~~~~~~~~~~~~~~i~~l~ 318 (741)
T 3hrz_D 245 NIYLVLDGSGSIGA-----SDFTGAKKCLVNLIEKVASYGVKPRYGLVTYATY-PKIWVKVSEADSSNADWVTKQLNEIN 318 (741)
T ss_dssp EEEEEEECSTTTCH-----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSS-EEEEECTTSGGGGCHHHHHHHHTTCC
T ss_pred eEEEEeccCCcccc-----cchHHHHHHHHHHHHhhhccCCCceEEEEEeccC-CceeEeecccCCcCHHHHHHHHHhcc
Confidence 48999999999964 4588999999999999877667789999999987 699999998 8999999999997
Q ss_pred -----cCCcCcHHHHHHHHHHHhccc-----CC-CCCCcEEEEEEcCCCCC--ChhhHHHHH----------HHHHhCCc
Q 016296 81 -----IGGEMNIAAGIQVAQLALKHR-----QN-KNQRQRIIVFAGSPVKY--DRKVMEMIG----------KKLKKNSV 137 (392)
Q Consensus 81 -----~~G~~sL~~gL~vA~laLkhr-----~~-k~~~~RIVvFvgSp~~~--d~~~l~~~a----------k~LKknnI 137 (392)
.+|++++..||+.|...|... .. +..++.||||.++..+. ++......+ +.+++.+|
T Consensus 319 ~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g~~p~~~~~~i~~~~~~~~~a~~~~~~gi 398 (741)
T 3hrz_D 319 YEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYL 398 (741)
T ss_dssp GGGGSSSCCCCHHHHHHHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCTTCCCGGGE
T ss_pred cccccCCCChHHHHHHHHHHHHHhhhhhccccchhccCeEEEEECCCccccCCCchHHHHHHHHHhhcccccccccccCe
Confidence 789999999999999988311 11 12344566777664432 444444322 36788999
Q ss_pred eEEEEEeCCCCCCcHHHHHHHHHHHcCCCCc-eEEEecCC
Q 016296 138 AIDIVNFGEDDDGKPEKLEALLAAVNNNDSS-HLVHVPTG 176 (392)
Q Consensus 138 ~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~S-h~v~vp~g 176 (392)
.|++||||... |.+.|+.|.... ++. |+..+..-
T Consensus 399 ~i~~igvG~~~--~~~~L~~ia~~~---~g~~~~~~~~~~ 433 (741)
T 3hrz_D 399 DVYVFGVGPLV--NQVNINALASKK---DNEQHVFKVKDM 433 (741)
T ss_dssp EEEEEECSSSC--CHHHHHHHSCCC---TTCCCEECBSSH
T ss_pred eEEEEeCCCcC--CHHHHHHHhcCC---CCcceEEEeCCH
Confidence 99999999854 567788886433 333 78777653
No 25
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=99.34 E-value=1.6e-11 Score=110.49 Aligned_cols=139 Identities=14% Similarity=0.177 Sum_probs=108.4
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCC--CHHHHHHhhcccccC
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTT--DLGKILACMHELDIG 82 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~--D~~kil~~L~~i~~~ 82 (392)
-++++||.|.||. +.+|+..++++..|++.+.-..+..+||||+|++. +.+..+++. +...++.+|.++...
T Consensus 23 DivfvlD~S~Sm~-----~~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~fs~~-~~~~~~l~~~~~~~~~~~~i~~l~~~ 96 (199)
T 3zqk_A 23 DVAFVLEGSDKIG-----EADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYM-VTVEYPFSEAQSKGDILQRLREIRYQ 96 (199)
T ss_dssp EEEEEEECCTTTC-----HHHHHHHHHHHHHHHHHSCBSTTSBEEEEEEESSS-EEEEECTTSCCCHHHHHHHHHHCCCC
T ss_pred CEEEEEECCCCCC-----HHHHHHHHHHHHHHHHhcCCCCCceEEEEEEECCc-ccEEEecCCcCCHHHHHHHHHhCcCC
Confidence 4789999999996 57899999999999998766678999999999987 689999985 889999999998754
Q ss_pred C--cCcHHHHHHHHHHHh-cccC--CCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHH
Q 016296 83 G--EMNIAAGIQVAQLAL-KHRQ--NKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEA 157 (392)
Q Consensus 83 G--~~sL~~gL~vA~laL-khr~--~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~ 157 (392)
| .+++..||+.|...| +... .+..++.||+|.++....+-.. + +.+|.|++||+|... |.+.|+.
T Consensus 97 gg~~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~d~v~~-------~-~~~v~v~~iGiG~~~--~~~~L~~ 166 (199)
T 3zqk_A 97 GGNRTNTGLALRYLSDHSFLVSQGDREQAPNLVYMVTGNPASDEIKR-------L-PGDIQVVPIGVGPNA--NVQELER 166 (199)
T ss_dssp CCSCCCHHHHHHHCCCCCTCGGGTCCTTSCEEEEEEECSCCSSCCCC-------C-CTTEEEEEEEESTTC--CHHHHHH
T ss_pred CCCcChHHHHHHHHHHHhhCcccCCCCCCCeEEEEEeCCCCchHHHH-------H-hCCCEEEEEEcCCCC--CHHHHHH
Confidence 4 499999999987643 2111 1234566777777765443222 1 379999999999753 6788888
Q ss_pred HH
Q 016296 158 LL 159 (392)
Q Consensus 158 ~~ 159 (392)
+.
T Consensus 167 iA 168 (199)
T 3zqk_A 167 IG 168 (199)
T ss_dssp HH
T ss_pred Hh
Confidence 86
No 26
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=99.20 E-value=7.4e-11 Score=104.47 Aligned_cols=129 Identities=9% Similarity=0.085 Sum_probs=94.1
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCH--HHHHHhhcccc-c
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDL--GKILACMHELD-I 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~--~kil~~L~~i~-~ 81 (392)
.++|+||.|.||. +.+|+.+++++..|+..+ ..+..+||||+|++. +.+..++|... ..+...+..+. .
T Consensus 4 divfvlD~S~Sm~-----~~~~~~~k~~~~~~~~~l--~~~~~rv~vv~fs~~-~~~~~~l~~~~~~~~~~~~~~~i~~~ 75 (179)
T 1mjn_A 4 DLVFLFDGSMSLQ-----PDEFQKILDFMKDVMKKC--SNTSYQFAAVQFSTS-YKTEFDFSDYVKRKDPDALLKHVKHM 75 (179)
T ss_dssp EEEEEEECBTTCC-----HHHHHHHHHHHHHHHHHT--TTSSEEEEEEEESSS-EEEEECHHHHHHHCCHHHHHTTCCCC
T ss_pred cEEEEEeCCCCCC-----HHHHHHHHHHHHHHHHHh--CCCCeEEEEEEECCc-eeEEEcCcccCCHHHHHHHHHhcccC
Confidence 4799999999996 468999999999999986 234469999999987 68889988532 23445555553 3
Q ss_pred CCcCcHHHHHHHHHH-Hhccc--CCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 82 GGEMNIAAGIQVAQL-ALKHR--QNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 82 ~G~~sL~~gL~vA~l-aLkhr--~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
+|++++..||+.|.. .|+.. ..+..++.||+|.++..+.+.. + +++.+|.|++||+|...
T Consensus 76 ~g~T~~~~aL~~a~~~~~~~~~g~r~~~~~~iillTDG~~~~~~~-~------~~~~~i~i~~igvG~~~ 138 (179)
T 1mjn_A 76 LLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGN-I------DAAKDIIRYIIGIGKHF 138 (179)
T ss_dssp CBCCCHHHHHHHHHHHTSSGGGTCCTTSEEEEEEEESSCCSSCSC-C------GGGTTSEEEEEEESGGG
T ss_pred CCCChHHHHHHHHHHHhcccccCCCCCCCeEEEEEcCCCCCCCcc-h------HHHCCCEEEEEEccccc
Confidence 689999999999985 44421 1133556677777776554321 1 26789999999999875
No 27
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=99.17 E-value=3.7e-11 Score=134.71 Aligned_cols=160 Identities=13% Similarity=0.140 Sum_probs=123.6
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCC--CHHHHHHhhccc-cc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTT--DLGKILACMHEL-DI 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~--D~~kil~~L~~i-~~ 81 (392)
-++|+||.|.||. +.+|+.+++++..|++.+. .+..+||||+|++. +.+..++|. +...++.++..+ ..
T Consensus 132 DIvfvlD~SgSm~-----~~~f~~~k~fv~~lv~~~~--~~~~rVglV~Fs~~-~~~~~~lt~~~~~~~l~~ai~~i~~~ 203 (1095)
T 3k6s_A 132 DIVFLIDGSGSIS-----SRNFATMMNFVRAVISQFQ--RPSTQFSLMQFSNK-FQTHFTFEEFRRSSNPLSLLASVHQL 203 (1095)
T ss_dssp EEEEEEECCTTSC-----SHHHHHHHHHHHHHHHSSC--SSSEEEEEEEESSS-EEEEECSHHHHSCSCGGGGTTTCCCC
T ss_pred cEEEEEcCCCCCC-----hhHHHHHHHHHHHHHHhcc--ccccEEEEEEECCe-EEEEecCcccCCHHHHHHHHhhhhcc
Confidence 4799999999995 6899999999999999864 34589999999987 699999995 667778888887 56
Q ss_pred CCcCcHHHHHHHHHHHhccc---CCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCC--CcHHHHH
Q 016296 82 GGEMNIAAGIQVAQLALKHR---QNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDD--GKPEKLE 156 (392)
Q Consensus 82 ~G~~sL~~gL~vA~laLkhr---~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~--~n~~~l~ 156 (392)
+|.+++..||+.|...|... ..+..++.||||.++....|+..+...++.+|+.||.|++||+|.... .+.+.|+
T Consensus 204 gG~T~~g~AL~~a~~~lf~~~~g~R~~~~kviIllTDG~~~~d~~~~~~~a~~~r~~GI~i~aIGVG~~~~~~~d~~eL~ 283 (1095)
T 3k6s_A 204 QGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELN 283 (1095)
T ss_dssp CSCBCHHHHHHHHHTTTTSTTTTCCSSSEEEEEEEESSCCBSCSSCHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHH
T ss_pred cCCChHHHHHHHHHHhhccccccCCCCCCeEEEEEeCCCcCCCchhHHHHHHHHHHCCCEEEEEecccccccccCHHHHH
Confidence 88999999999997755321 113345567777777665677788999999999999999999998620 2456777
Q ss_pred HHHHHHcCCCCceEEEecC
Q 016296 157 ALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 157 ~~~~~vn~~d~Sh~v~vp~ 175 (392)
.+.. ..++.|+..+..
T Consensus 284 ~IAs---~p~g~~vf~v~d 299 (1095)
T 3k6s_A 284 DIAS---KPSQEHIFKVED 299 (1095)
T ss_dssp TTSC---SSTTTSCCCBSC
T ss_pred HHHc---CCCCceEEEcCC
Confidence 7653 224457776654
No 28
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=98.80 E-value=1.2e-08 Score=105.96 Aligned_cols=129 Identities=14% Similarity=0.148 Sum_probs=87.1
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHH--HHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHH--HHHHhhcccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADA--VSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLG--KILACMHELD 80 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~da--v~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~--kil~~L~~i~ 80 (392)
.++||||.|.||..+|.. +|+.+ +++ +-.|+. ..+..+||||+|++. .+.+++|.+.. .++..|..+
T Consensus 370 ~v~lvvD~SgSM~~~~~~-~~l~~-~~~Aa~l~~~~----~~~~d~vglv~Fs~~--~~~~~~t~~~~l~~~l~~l~~~- 440 (538)
T 1yvr_A 370 RFLLAIDVSASMNQRVLG-SILNA-SVVAAAMCMLV----ARTEKDSHMVAFSDE--MLPCPITVNMLLHEVVEKMSDI- 440 (538)
T ss_dssp CEEEEEECSGGGGSBSTT-SSCBH-HHHHHHHHHHH----HHHCSSEEEEEESSS--EECCSCCTTSCHHHHHHHHTTC-
T ss_pred eEEEEEECccccCCCCCC-CcHHH-HHHHHHHHHHH----hccCCceEEEEECCC--ceEcCCCCcccHHHHHHHHhcC-
Confidence 588999999999998876 66776 443 333333 235779999999973 55667776544 344444443
Q ss_pred cCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhC-C--ceEEEEEeCCCC
Q 016296 81 IGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKN-S--VAIDIVNFGEDD 148 (392)
Q Consensus 81 ~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKkn-n--I~VdiI~fG~e~ 148 (392)
++|+|++..+|..|... +....+||||+++.......++...++++++. | |++++||||...
T Consensus 441 ~~GgT~i~~aL~~a~~~------~~~~~~iIliTDg~~~~g~~~~~~~l~~~~~~~~~~v~l~~igig~~~ 505 (538)
T 1yvr_A 441 TMGSTDCALPMLWAQKT------NTAADIFIVFTDCETNVEDVHPATALKQYREKMGIPAKLIVCAMTSNG 505 (538)
T ss_dssp CCSCCCTTHHHHHHHHT------TCCCSEEEEEECCCCCSSSCCHHHHHHHHHHHHTCCCEEEEEECSSSS
T ss_pred CCCCCcHHHHHHHHHhc------cCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHhCCCcEEEEEEecCCC
Confidence 68999999999988543 22446788888775544333455666665543 5 555999999854
No 29
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=98.67 E-value=5.3e-08 Score=107.38 Aligned_cols=112 Identities=21% Similarity=0.185 Sum_probs=82.2
Q ss_pred eEEEEEeCCccccCCCCC-CcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCc-----eE-----------------
Q 016296 5 ATMICIDNSEWMRNGDYS-PSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGV-----RV----------------- 61 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~-PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~-----~v----------------- 61 (392)
.+|||||.|.||...++. ++||+..++++..|++.+. .+|..+||||+|++... .|
T Consensus 226 DIVfVLD~SGSM~~~~~~~~~Rl~~~K~a~~~~ld~L~-~~~~drVgLV~Fs~~a~~~~~~~v~~~~~~~~g~~~n~~~~ 304 (893)
T 2ww8_A 226 DVVILLDNSNSMSNIRNKNARRAERAGEATRSLIDKIT-SDSENRVALVTYASTIFDGTEFTVEKGVADKNGKRLNDSLF 304 (893)
T ss_dssp EEEEEEECCGGGCTTHHHHCCHHHHHHHHHHHHHHHHH-TSTTCEEEEEEESSSBCBSCEEEEECCEECTTCCEECCCTT
T ss_pred cEEEEEeCCCCCCCcCccchhHHHHHHHHHHHHHHHhh-cCCCcEEEEEEecCccccccccccccccccccccccccccc
Confidence 489999999999986543 3599999999999996554 58999999999998531 11
Q ss_pred ----------------EECCCCCHHHH---HHhhcc----------cccCCcCcHHHHHHHHHHHhcccCCCCCCcEEEE
Q 016296 62 ----------------LTTPTTDLGKI---LACMHE----------LDIGGEMNIAAGIQVAQLALKHRQNKNQRQRIIV 112 (392)
Q Consensus 62 ----------------lvtlT~D~~ki---l~~L~~----------i~~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVv 112 (392)
.++||.|+..+ ...|.. +.+.|++++..||..|...|+....+..++.|||
T Consensus 305 w~~~~t~~t~~~~~~~~lpLT~d~~~i~~lk~~I~~~~~~~~G~~~l~~~GGT~i~~AL~~A~~lL~~~~~~~~~kvIIL 384 (893)
T 2ww8_A 305 WNYDQTSFTTNTKDYSYLKLTNDKNDIVELKNKVPTEAEDHDGNRLMYQFGATFTQKALMKADEILTQQARQNSQKVIFH 384 (893)
T ss_dssp SCTTCCEEEEECCBCCEEEEECCHHHHHHHHHHSCSCCCCSCTTSGGGGGCSCCHHHHHHHHHHHHHHHSCSSSEEEEEE
T ss_pred cccccccccccccccccccccCCHHHHHHHHHHHhhhccccccccccccCCCChHHHHHHHHHHHHHhhcccCCCeEEEE
Confidence 23677888544 477764 3457899999999999999974322344555666
Q ss_pred EEcCC
Q 016296 113 FAGSP 117 (392)
Q Consensus 113 FvgSp 117 (392)
+.++.
T Consensus 385 LTDG~ 389 (893)
T 2ww8_A 385 ITDGV 389 (893)
T ss_dssp EESSC
T ss_pred EcCCC
Confidence 66553
No 30
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=98.52 E-value=8.9e-07 Score=92.27 Aligned_cols=129 Identities=12% Similarity=0.098 Sum_probs=85.1
Q ss_pred eEEEEEeCCccccCCCC----CCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHHHHHHhhcccc
Q 016296 5 ATMICIDNSEWMRNGDY----SPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLGKILACMHELD 80 (392)
Q Consensus 5 a~~IvIDnSesMrngD~----~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~i~ 80 (392)
.++||||.|.||..++. ++++++++...+ |+... +..+|||++|++. -..+++|.+ ..++..|..+.
T Consensus 364 ~~lv~vDvSgSM~~~~~~~~~k~~~~e~Aa~la--~~~~r----~~d~v~lv~Fs~~--~~~~~~~~~-~~l~~~l~~l~ 434 (535)
T 2nvo_A 364 RHLLALDVSGSMTCGDVAGVPGLTPNMAAAAMS--LIALR----TEPDALTMGFAEQ--FRPLGITPR-DTLESAMQKAQ 434 (535)
T ss_dssp EEEEEECCSGGGGSCCGGGCTTCCHHHHHHHHH--HHHHH----HSSEEEEEEEBSS--EEECCCCTT-CCHHHHHHHTC
T ss_pred eEEEEEECCccccCCCCCCCCcccHHHHHHHHH--HHHcC----cCCceEEEEECCc--ceEcCCCcc-hhHHHHHHHHh
Confidence 47899999999987333 367777665433 33222 2448999999984 334566655 34444444442
Q ss_pred --cCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhC---CceEEEEEeCCCC
Q 016296 81 --IGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKN---SVAIDIVNFGEDD 148 (392)
Q Consensus 81 --~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKkn---nI~VdiI~fG~e~ 148 (392)
++|+|++..+|..|. ++ +....+||||++........++.+++++.|+. +++|.+|++|...
T Consensus 435 ~~~~ggTdi~~~l~~a~---~~---~~~~~~vIliTD~~~~~g~~~~~~al~~~r~~~~~~~klv~i~l~~~~ 501 (535)
T 2nvo_A 435 SVSFGGTDCAQPILWAA---QE---RLDVDTFVVYTDNETWAGQVHPTVALDQYAQKMGRAPKLIVVGLTATE 501 (535)
T ss_dssp CSSBCCCCTTHHHHHHH---HT---TCCCSEEEEEESSCCCCCSSCHHHHHHHHHHHHSCCCEEEEEETTCSC
T ss_pred hCCCCCccHHHHHHHHH---Hh---cCCCCEEEEEeCCCccCCCCCHHHHHHHHHHhhCCCCeEEEEeccCCC
Confidence 378999999987663 22 23457788888776554444556666777765 8999999999754
No 31
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=98.49 E-value=2.8e-07 Score=87.84 Aligned_cols=88 Identities=22% Similarity=0.280 Sum_probs=76.7
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCC--ceEEE-CCCCCHHHHHHhhccccc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKG--VRVLT-TPTTDLGKILACMHELDI 81 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~--~~vlv-tlT~D~~kil~~L~~i~~ 81 (392)
.|+|+||.|.||. .||.+.+.++..++..+......++||||+|+++. +.+++ ++|.+. .+...|..+..
T Consensus 136 ~vvfLVDtSgSM~------~kl~~vk~al~~Ll~sl~~~~~~~~VavV~F~~~~~~~~~ll~pfT~~~-~~~~~l~~L~a 208 (242)
T 3rag_A 136 HLVVCLDTSASMR------DKIPTVREAVRDLALSLKVRSGPLAVSVIAFPGKGEEATRLVQPFSSEV-NVAALEAELVA 208 (242)
T ss_dssp EEEEEEECSGGGT------TTHHHHHHHHHHHHHHHTTSSSCEEEEEEEESCSTTCSCEEEEEEESSC-CHHHHHHHCCC
T ss_pred CEEEEEECcccHH------HHHHHHHHHHHHHHHHHhccCCCcEEEEEEECCCCccceeecCCCCChH-HHHHHHhhCCC
Confidence 5899999999996 27999999999999987655679999999999974 45565 999998 77788999999
Q ss_pred CCcCcHHHHHHHHHHHhc
Q 016296 82 GGEMNIAAGIQVAQLALK 99 (392)
Q Consensus 82 ~G~~sL~~gL~vA~laLk 99 (392)
+|.|.+..||..|...|+
T Consensus 209 gG~Tplg~AL~~A~~~~~ 226 (242)
T 3rag_A 209 RGGTPTGPAIDHAADLLL 226 (242)
T ss_dssp CSCCCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHH
Confidence 999999999999988773
No 32
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=98.48 E-value=8.4e-07 Score=96.39 Aligned_cols=163 Identities=16% Similarity=0.170 Sum_probs=113.0
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEEC--------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTT-------------------- 64 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvt-------------------- 64 (392)
+.++|||+|.+.. ++++.++++..++.. .+|..+||||||.+. +.+.--
T Consensus 134 ~~vFvIDvS~~a~-------~l~~l~~si~~~L~~---Lp~~~~VGlITf~~~-v~~y~l~~~~~~~~~vf~G~k~~~~~ 202 (769)
T 2nut_A 134 IFLYVVDTCMEDE-------DLQALKESMQMSLSL---LPPTALVGLITFGRM-VQVHELGCEGISKSYVFRGTKDLSAK 202 (769)
T ss_dssp EEEEEEECCSCHH-------HHHHHHHHHHHHHTT---SCTTCEEEEEEESSE-EEEEESSCCSSCEEEEEETTSCCCSH
T ss_pred EEEEEEECCccHH-------HHHHHHHHHHHHHHh---CCCCceEEEEEeCCE-EEEEeCCCCCCccceeecCCccccHH
Confidence 5789999998743 689999999998875 667889999999864 344110
Q ss_pred -------CC-----------CC----------------HHHHHHhhccccc---------CCcCcHHHHHHHHHHHhccc
Q 016296 65 -------PT-----------TD----------------LGKILACMHELDI---------GGEMNIAAGIQVAQLALKHR 101 (392)
Q Consensus 65 -------lT-----------~D----------------~~kil~~L~~i~~---------~G~~sL~~gL~vA~laLkhr 101 (392)
++ .| ...|...|+.+.. .....++.||++|..+|+..
T Consensus 203 q~~~ml~v~d~~~~~~~~~~~~~f~~p~~~~lv~~~e~~~~i~~lLe~L~~~~~~~~~~~~~~~a~G~Al~~A~~lL~~~ 282 (769)
T 2nut_A 203 QLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECT 282 (769)
T ss_dssp HHHHHHC-------------------CCCSSSEEHHHHHHHHHHHHHHCCCCSSCCCTTBCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcccccccccccccCCCcccceeeeHHHHHHHHHHHHHhcccccccccCCCCCccchHHHHHHHHHHHhhc
Confidence 10 11 1123344555543 45789999999999999864
Q ss_pred CCCCCCcEEEEEEcCCCCCChhh------------------------------HHHHHHHHHhCCceEEEEEeCCCCCCc
Q 016296 102 QNKNQRQRIIVFAGSPVKYDRKV------------------------------MEMIGKKLKKNSVAIDIVNFGEDDDGK 151 (392)
Q Consensus 102 ~~k~~~~RIVvFvgSp~~~d~~~------------------------------l~~~ak~LKknnI~VdiI~fG~e~~~n 151 (392)
.++..-||++|++++-+..++. -.++|+++.+++|.||+..|+... -.
T Consensus 283 -~~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~ke~~~~~~~a~~fY~~la~~~~~~gi~VDlF~~~~~~-vd 360 (769)
T 2nut_A 283 -FPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQ-TG 360 (769)
T ss_dssp -SCSSCCEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHTTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEEECSSC-CC
T ss_pred -ccCCCcEEEEEeCCCCCCCCCCCcCcccccccccccccccchhhhccchHHHHHHHHHHHHHCCeEEEEEeccCCc-cC
Confidence 2356788999999876422111 245899999999999999999877 67
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCC-Chhhhhhh
Q 016296 152 PEKLEALLAAVNNNDSSHLVHVPTG-PNALSDVL 184 (392)
Q Consensus 152 ~~~l~~~~~~vn~~d~Sh~v~vp~g-~~lLsD~l 184 (392)
..-|+.+++.++| +++..+.- ...+.+.+
T Consensus 361 la~l~~l~~~TGG----~~~~~~~F~~~~~~~~l 390 (769)
T 2nut_A 361 LLEMKCCPNLTGG----YMVMGDSFNTSLFKQTF 390 (769)
T ss_dssp HHHHTHHHHHSSC----CEEEESCSSSHHHHHHH
T ss_pred hHHHHHHhhcCCc----eEEEcCCCchhhHHHHH
Confidence 7889999987743 34444442 22344444
No 33
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=98.36 E-value=9.1e-06 Score=75.93 Aligned_cols=166 Identities=11% Similarity=0.110 Sum_probs=114.1
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHHHHHHhhcccccCCc
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLGKILACMHELDIGGE 84 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~i~~~G~ 84 (392)
-+++|+|.|.||..- ++..+..++.++++.-..+...++|+++|.+++.....++|.|..++...+.+++++|+
T Consensus 5 Dl~fl~D~S~SM~~d------i~~lk~~~~~l~~~l~~~~~~~r~Gfg~f~Dk~~~~~l~lT~d~~~F~~~v~~~~vsg~ 78 (212)
T 2iue_A 5 DLYFLMGLSGSAQGH------LSNVQTLGSDLLKALNEISRSGRIGFGSIVNMTFQHILKLTADSSQFQRELRKQLVSGK 78 (212)
T ss_dssp EEEEEEECCGGGTTT------HHHHHHHHHHHHHHHHHHCSCEEEEEEEESSSCEEEEEEEESCHHHHHHHHHTCCCCCC
T ss_pred EEEEEEeCCCcchhH------HHHHHHHHHHHHHHHHhhCcCceEEEEEEEcCcceecCCcCCCHHHHHHHHhhccccCC
Confidence 379999999999865 88888888988888766667899999999999888888999999999999999988774
Q ss_pred Cc----HHHHHHHHHHHhcccCCCCCCcEEEEEEcC-CC-CC-Ch----------------------------hhHHHHH
Q 016296 85 MN----IAAGIQVAQLALKHRQNKNQRQRIIVFAGS-PV-KY-DR----------------------------KVMEMIG 129 (392)
Q Consensus 85 ~s----L~~gL~vA~laLkhr~~k~~~~RIVvFvgS-p~-~~-d~----------------------------~~l~~~a 129 (392)
-+ -..||..|........-++ ..|+|||+.. +- .. |. ..+.++.
T Consensus 79 ~D~PE~g~dal~qa~~c~~~i~Wr~-a~rllvl~TDa~~H~~gDg~l~gi~~pnd~~chl~~g~y~~s~~~Dyps~~q~~ 157 (212)
T 2iue_A 79 LATPKGQLDAVVQVAICLGEIGWRN-GTRFLVLVTDNDFHLAKDKTLGTRQNTSDGRCHLDDGMYRSRGEPDYQSVVQLA 157 (212)
T ss_dssp SSSSBCHHHHHHHHHHCHHHHTCCS-SEEEEEEECSSCBCCTTGGGGGTCCSCCCSSCCBSSSBBGGGGSSCCCCHHHHH
T ss_pred CCCCchHHHHHHHHHHhhhhcccCC-ccEEEEEECcCCccccCCccccccccCCccccccCCCeeccCcccCCCCHHHHH
Confidence 22 2234444442212111223 6788888732 22 11 11 3577899
Q ss_pred HHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCChhhhhhh
Q 016296 130 KKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGPNALSDVL 184 (392)
Q Consensus 130 k~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~lLsD~l 184 (392)
++|+++||.+...-= . .....++.|.+.+ .++....+..+...+-+.|
T Consensus 158 ~~l~~~~i~~ifavt---~-~~~~~Y~~l~~~i---~~s~v~~L~~dSsni~~li 205 (212)
T 2iue_A 158 SKLAENNIQPIFVVP---S-RMVKTYEKLTTFI---PKLTIGELSDDSSNVAQLI 205 (212)
T ss_dssp HHHHHHTCEEEEEEE---H-HHHHHHHHHHHHS---TTCEEEEESSCCHHHHHHH
T ss_pred HHHHhcCCcEEEEEc---c-chhHHHHHHHHHc---ccceeeeecCCcHHHHHHH
Confidence 999999987644332 1 2234678887776 3566767766543344444
No 34
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=98.20 E-value=1e-05 Score=88.47 Aligned_cols=148 Identities=12% Similarity=0.108 Sum_probs=103.9
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEE----------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVL---------------------- 62 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vl---------------------- 62 (392)
+.++|||+|.++.+.. .|++.++++...+...-..+|...||||||... +.+.
T Consensus 189 ~yvFvIDvs~~av~~g----~l~~~~~si~~~L~~Lp~~~~~~~VGlITfd~~-V~~~~l~~~~~g~k~~~~q~~mlvv~ 263 (810)
T 1pcx_A 189 TYCFLIDVSQSSIKSG----LLATTINTLLQNLDSIPNHDERTRISILCVDNA-IHYFKIPLDSENNEESADQINMMDIA 263 (810)
T ss_dssp EEEEEEECSHHHHHHT----HHHHHHHHHHHHTTTSCCTTSCCEEEEEEESSS-EEEEECCCGGGC-------CEEECCC
T ss_pred EEEEEEECChHHHhhh----HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE-EEEEecCccccCccccccchhhcccc
Confidence 5799999998864211 477788888777765433445789999999754 3433
Q ss_pred --------------ECCCCCHHHHHHhhcccc------cCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCCh
Q 016296 63 --------------TTPTTDLGKILACMHELD------IGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDR 122 (392)
Q Consensus 63 --------------vtlT~D~~kil~~L~~i~------~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~ 122 (392)
+++......|...|+.+. -.++..++.||++|...|++ ..-||++|++++-+..+
T Consensus 264 dl~d~f~P~~~~~Lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~a~G~AL~~A~~lL~~-----~GGrI~~F~sg~pt~Gp 338 (810)
T 1pcx_A 264 DLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGG-----VGGKIIVVSGTLPNLGI 338 (810)
T ss_dssp CTTCC-----TTTSEETTTTHHHHHHHHHHHHHHTTTCCCCCCCHHHHHHHHHHHHTT-----TCEEEEEEESSCCCSST
T ss_pred ccccccCCCcccccccHHHHHHHHHHHHHhhhhhccCCCCCCccHHHHHHHHHHHHHh-----cCCEEEEEecCCCCCCC
Confidence 112222333344444432 25689999999999999985 45789999998754211
Q ss_pred h--------------------------hHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 123 K--------------------------VMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 123 ~--------------------------~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
+ --.++|+++.+++|.||+..++... -...-|..+++.++
T Consensus 339 G~l~~r~~~~~~~~~ke~~~l~~~a~~fY~~la~~~~~~gi~VDlF~~s~~~-~dla~l~~l~~~TG 404 (810)
T 1pcx_A 339 GKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDY-MDVASLSNLSRFTA 404 (810)
T ss_dssp TCCCC--------------------CCHHHHHHHHHHHTTEEEEEEEEESSC-CCHHHHHHHHHTTT
T ss_pred CcccccccccccCcccchhhhcccchHHHHHHHHHHHHCCeEEEEEEccCCc-cChHHHHHHHhcCC
Confidence 1 1257899999999999999999876 57788899987774
No 35
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=98.08 E-value=2.2e-05 Score=85.31 Aligned_cols=146 Identities=18% Similarity=0.203 Sum_probs=104.1
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEE---------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLT--------------------- 63 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlv--------------------- 63 (392)
..++|||+|.... .|++.++++...++. .+|...||||||... +.+.-
T Consensus 123 ~~vFvIDvs~~~~-------~l~~l~~sl~~~L~~---Lp~~~~VGlITf~~~-V~~y~l~~~~~~~~~V~~g~k~~~~~ 191 (768)
T 1m2o_A 123 IFFFVVDLTSETE-------NLDSLKESIITSLSL---LPPNALIGLITYGNV-VQLHDLSSETIDRCNVFRGDREYQLE 191 (768)
T ss_dssp EEEEEEECCSCHH-------HHHHHHHHHHHHHHT---SCTTCEEEEEEESSE-EEECCCSSSSSEEEEEEETTSCCCHH
T ss_pred EEEEEEECCcCHH-------HHHHHHHHHHHHHHh---CCCCCEEEEEEECCE-EEEEECCCCCCcceeeecCCccccHH
Confidence 5689999998864 488888888888874 667889999999743 23211
Q ss_pred -------CCCC----C---------------------------HHHHHHhhccccc---------CCcCcHHHHHHHHHH
Q 016296 64 -------TPTT----D---------------------------LGKILACMHELDI---------GGEMNIAAGIQVAQL 96 (392)
Q Consensus 64 -------tlT~----D---------------------------~~kil~~L~~i~~---------~G~~sL~~gL~vA~l 96 (392)
.++. | ...|...|+++.. .....++.||++|..
T Consensus 192 q~~~~l~~l~~~~~~~~~~~~~~~~f~p~~~~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~~~~G~Al~~A~~ 271 (768)
T 1m2o_A 192 ALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASL 271 (768)
T ss_dssp HHHHHHHSCCCC---------------CCSSSGGGGSEEHHHHHHHHHHHHHTCCCSCSCCCTTBCCCCCHHHHHHHHHH
T ss_pred HHHHHHhhccccccCCccccccccccccccCCccceeeeHHHHHHHHHHHHHhccccccccCCCCCCcccHHHHHHHHHH
Confidence 0000 1 0113334444432 345789999999999
Q ss_pred HhcccCCCCCCcEEEEEEcCCCCCChh---------------h---------------HHHHHHHHHhCCceEEEEEeCC
Q 016296 97 ALKHRQNKNQRQRIIVFAGSPVKYDRK---------------V---------------MEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 97 aLkhr~~k~~~~RIVvFvgSp~~~d~~---------------~---------------l~~~ak~LKknnI~VdiI~fG~ 146 (392)
.|+.. .++..-||++|++++-+..++ + -.++|+++.+++|.||+..++.
T Consensus 272 ll~~~-~~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~k~~~~~~~~a~~fY~~la~~~~~~gi~VDlF~~~~ 350 (768)
T 1m2o_A 272 LLQGC-YKNIPARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCY 350 (768)
T ss_dssp HHHHH-CTTSCCEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHHTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEEECS
T ss_pred HHhhc-cCCCCcEEEEEeCCCCCCCCccccccccccccccccccccchhhhcCchHHHHHHHHHHHHHCCeEEEEEEccC
Confidence 99864 245778899999987652111 0 1467899999999999999998
Q ss_pred CCCCcHHHHHHHHHHHc
Q 016296 147 DDDGKPEKLEALLAAVN 163 (392)
Q Consensus 147 e~~~n~~~l~~~~~~vn 163 (392)
.. -...-+..+++.++
T Consensus 351 ~~-~dla~l~~l~~~TG 366 (768)
T 1m2o_A 351 DQ-IGMSEMKQLTDSTG 366 (768)
T ss_dssp SC-CSHHHHHHHHHHHT
T ss_pred Cc-cChHHHhhHhhcCC
Confidence 76 67888999998885
No 36
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=98.08 E-value=1.9e-05 Score=87.47 Aligned_cols=148 Identities=12% Similarity=0.108 Sum_probs=103.7
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEE----------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVL---------------------- 62 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vl---------------------- 62 (392)
+.++|||+|....+.. .|++.++++...+...-..+|...||||||... +.+.
T Consensus 305 vyvFvIDvS~~av~~g----~l~~l~~sI~~~L~~LP~~~~~~~VGlITFds~-Vh~y~l~~~~~g~k~~~~q~qmlvvs 379 (926)
T 1m2v_B 305 TYCFLIDVSQSSIKSG----LLATTINTLLQNLDSIPNHDERTRISILCVDNA-IHYFKIPLDSENNEESADQINMMDIA 379 (926)
T ss_dssp BEEEEEECSHHHHHSC----HHHHHHHHHHHTTTTSCCTTSCCEECEEEESSS-EEEEECCCC---------CCEEEEEC
T ss_pred EEEEEEECCHHHHhhh----HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE-EEEEecCCcccCCcccccchhhcccc
Confidence 5799999998764211 467777777776665433345689999999753 2322
Q ss_pred --------------ECCCCCHHHHHHhhcccc------cCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCCh
Q 016296 63 --------------TTPTTDLGKILACMHELD------IGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDR 122 (392)
Q Consensus 63 --------------vtlT~D~~kil~~L~~i~------~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~ 122 (392)
+++......|...|+.|. -..+..++.||++|..+|++ ..-||++|++++-+..+
T Consensus 380 dl~d~f~P~~~~~Lv~l~e~~~~I~~lLe~L~~~~~~~~~~~~~~G~AL~aA~~lL~~-----~GGrI~~F~sg~Pt~Gp 454 (926)
T 1m2v_B 380 DLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGG-----VGGKIIVVSGTLPNLGI 454 (926)
T ss_dssp CCSSCCCSCSSSSSEETTTTHHHHHHHHHHHHHHTSSCCCCCCCHHHHHHHHHHHHTT-----TCEEEEEEESSCCCSST
T ss_pred ccccccCCCcccccccHHHHHHHHHHHHHhhhhhhcCCCCCCccHHHHHHHHHHHHHh-----hCCEEEEEecCCCCCCC
Confidence 222333444444555442 24578999999999999986 45689999998754211
Q ss_pred h-----------------h---------HHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 123 K-----------------V---------MEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 123 ~-----------------~---------l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
+ . -.++|+++.+++|.||+..++... -...-|..+++.++
T Consensus 455 G~l~~re~~~~~~~~ke~~~ll~~a~~FYk~LA~~~~~~gisVDlF~~s~~~-vdla~l~~l~~~TG 520 (926)
T 1m2v_B 455 GKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDY-MDVASLSNLSRFTA 520 (926)
T ss_dssp TCCCCCCC----CCTTHHHHHTSCSSTHHHHHHHHHHHHTEEEEEEEEESSC-CCHHHHHHHHHTTT
T ss_pred CcccccccccccCcccchhhhccchHHHHHHHHHHHHHcCeEEEEEEccCCC-cChHHHHHHHhcCC
Confidence 1 1 257899999999999999999876 57788899987774
No 37
>2klz_A Ataxin-3; UIM, ubiquitin-binding, hydrolase, neurodegenerati nucleus, phosphoprotein, spinocerebellar ataxia, transcript transcription regulation; NMR {Homo sapiens}
Probab=97.74 E-value=6.7e-06 Score=59.91 Aligned_cols=40 Identities=38% Similarity=0.542 Sum_probs=33.7
Q ss_pred CChHHHHHHHHhhccCCCCCCCCCcccCCCCCCChHHHHHHHHHcccCCCCC
Q 016296 291 DEEKSLLERAFAMSMGTSVSDTSMADADTSKATDEDKELALALQMSMQDDTK 342 (392)
Q Consensus 291 ~~e~~~L~~Al~~S~~~~~~~~~~~~~~~~~~~~ee~~ia~A~~ms~~~~~~ 342 (392)
+++|+.||+||++|+|+. +..+||..+.+|||+|||....
T Consensus 4 dEDEedlqrALalSRQE~------------dmEDeeadLrrAiqLSmQGss~ 43 (52)
T 2klz_A 4 DEDEEDLQRALALSRQEI------------DMEDEEADLRRAIQLSMQGSSR 43 (52)
T ss_dssp HHHHHHHHHHHHHHHHHH------------CCSSSHHHHHHHHHHHHTTCCS
T ss_pred ccchHHHHHHHHHHHHHh------------ccchhHHHHHHHHHHHhhcccc
Confidence 356779999999999987 4567899999999999997644
No 38
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=97.69 E-value=0.00032 Score=75.54 Aligned_cols=160 Identities=10% Similarity=0.105 Sum_probs=102.8
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCC--------------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKG-------------------------- 58 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~-------------------------- 58 (392)
-+|+++|.|.||.. =|+..+..+..|+++.-..-...++|+.+|.++.
T Consensus 113 Dly~LmD~S~SM~d------di~~lk~l~~~l~~~l~~~t~~~r~Gfgsf~Dk~~~P~~~~~p~~~~~~pc~~~~~~c~~ 186 (690)
T 3fcs_B 113 DIYYLMDLSYSMKD------DLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLP 186 (690)
T ss_dssp EEEEEEECSGGGHH------HHHHTTTTTHHHHHHHHHHCSCEEEEEEEECCCSSTTTSCCCSTTTTTCTTSSSSSCCCC
T ss_pred cEEEEecCCcchHH------HHHHHHHHHHHHHHHHHhhCcCceEEeEEeeccccCCccccChhhhccCCCcCCCCCCCC
Confidence 47899999999974 2344455555555554444456899999999842
Q ss_pred ---ceEEECCCCCHHHHHHhhcccccCCcCcH----HHHHHHHHHHhcccCCCCCCcEEEEEEcC-CCCC--Ch------
Q 016296 59 ---VRVLTTPTTDLGKILACMHELDIGGEMNI----AAGIQVAQLALKHRQNKNQRQRIIVFAGS-PVKY--DR------ 122 (392)
Q Consensus 59 ---~~vlvtlT~D~~kil~~L~~i~~~G~~sL----~~gL~vA~laLkhr~~k~~~~RIVvFvgS-p~~~--d~------ 122 (392)
.+-..+||.|..++...++++.+.|+.+. ..||..|..-.+...-+....|||||+.. +... |.
T Consensus 187 ~f~f~~~l~lt~~~~~f~~~v~~~~isgn~D~PE~g~dAl~qa~~c~~~igWr~~a~rllv~~TDa~~H~agDg~l~gi~ 266 (690)
T 3fcs_B 187 MFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIV 266 (690)
T ss_dssp CCSEEEEEEEESCHHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCSSSEEEEEEEESSCBCCTTGGGGGTCC
T ss_pred CccceeecccCCCHHHHHHHhhceeccCCCCCCchHHHHHHHHhhcccccCCCCCceEEEEEECCCccccCCCcccccee
Confidence 12346899999999999999988875332 34444443211222122356778877743 3210 11
Q ss_pred -----------------------hhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCC
Q 016296 123 -----------------------KVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGP 177 (392)
Q Consensus 123 -----------------------~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~ 177 (392)
..+.++.++|+++||.+.+..... ....++.|.+.+. ++.+.++-.+.
T Consensus 267 ~pnd~~chl~~~~~y~~s~~~DypSi~ql~~~l~~~~i~~ifavt~~----~~~~y~~l~~~i~---~s~v~~l~~dS 337 (690)
T 3fcs_B 267 QPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTEN----VVNLYQNYSELIP---GTTVGVLSMDS 337 (690)
T ss_dssp SCCCCCCCBCTTCBBGGGGTSCCCCHHHHHHHHHHTTCEEEEEEEGG----GHHHHHHHHHHST---TCEEEEECTTC
T ss_pred cCCCcceeecCCCccccccccCCCCHHHHHHHHHHcCCeEEEEEeCC----chhhHHHHHhhcC---Cceeeeecccc
Confidence 137889999999999876666553 3457888887773 46666665553
No 39
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=97.66 E-value=0.0005 Score=74.79 Aligned_cols=151 Identities=17% Similarity=0.177 Sum_probs=103.7
Q ss_pred eEEEEEeCCccc-cCCCCCCcHHHHHHHHHHHHHHhhhc----CCCCCcEEEEEecCC-----------Cce--------
Q 016296 5 ATMICIDNSEWM-RNGDYSPSRLRAQADAVSLICGAKTQ----SNPENTVGILTMGGK-----------GVR-------- 60 (392)
Q Consensus 5 a~~IvIDnSesM-rngD~~PtRl~aq~dav~~fv~~k~~----~NPes~VGLvtmag~-----------~~~-------- 60 (392)
+.+++||+|..- ++|. +++.++++...+...-. ..|...||||||... .+.
T Consensus 175 ~y~FvIDvs~~av~sg~-----l~~~~~si~~~L~~lp~~~~~~~~~~~VG~ITfd~~vh~y~l~~~~~~~q~~vv~dl~ 249 (766)
T 3eh2_A 175 AFIFMIDVSYNAIRTGL-----VRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVA 249 (766)
T ss_dssp EEEEEEECSHHHHHTTH-----HHHHHHHHHHHGGGCCCCSSCSSCCCEEEEEEESSSEEEEECCTTCSSCEEEEECCTT
T ss_pred EEEEEEECchhhccchH-----HHHHHHHHHHHHHhCCcccccCCccceEEEEEeCCEEEEEECCCCCCCceEEEecChh
Confidence 457899999653 3333 67777887777765311 012378999999742 111
Q ss_pred ---------EEECCCCCHHHHHHhhccc------ccCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcC-CCCCCh--
Q 016296 61 ---------VLTTPTTDLGKILACMHEL------DIGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGS-PVKYDR-- 122 (392)
Q Consensus 61 ---------vlvtlT~D~~kil~~L~~i------~~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgS-p~~~d~-- 122 (392)
.|+++......|.+.|+++ ....++.++.+|+.|.++|+.. +..-||++|+++ |.+..+
T Consensus 250 d~f~P~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~t~~g~al~aa~~~l~~~---~~GGkI~~F~s~lP~t~GpG~ 326 (766)
T 3eh2_A 250 DMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEALKAA---ECAGKLFLFHTSLPIAEAPGK 326 (766)
T ss_dssp TCCCCCCTTSSBCTTTTHHHHHHHHHHHHHHHTTCCCCCCCSHHHHHHHHHHHHHT---TCCEEEEEEECSCCCSSSTTC
T ss_pred hhccccccceeEeHHHHHHHHHHHHHhhhhhccCCCCCcchHHHHHHHHHHHhccC---CCCcEEEEEecCCCCcCCCcc
Confidence 1333344444554555544 2345788999999999999873 468899999988 663111
Q ss_pred -----------------------hhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcC
Q 016296 123 -----------------------KVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNN 164 (392)
Q Consensus 123 -----------------------~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~ 164 (392)
+--.++|+++.+++|.||+..++... -...-+..+++.++|
T Consensus 327 l~~r~~~~~~~sdke~~~~~~a~~fY~~la~~~~~~~i~VDlF~~s~~~-vdlatl~~l~~~TGG 390 (766)
T 3eh2_A 327 LKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQY-VDVATLSVVPQLTGG 390 (766)
T ss_dssp CCCCCCGGGTTSTTGGGGTSCSSTHHHHHHHHHHHHTEEEEEEECCSSC-CCHHHHTHHHHHTTC
T ss_pred cccccccccCCCcchhhhccchHHHHHHHHHHHHhCCeEEEEEEecCCC-cChHHHHHHHhhcCc
Confidence 12268999999999999999999876 678888899887753
No 40
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=97.63 E-value=0.00072 Score=73.39 Aligned_cols=147 Identities=12% Similarity=0.107 Sum_probs=98.0
Q ss_pred eEEEEEeCCcccc-CCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCC-----------ceE-----------
Q 016296 5 ATMICIDNSEWMR-NGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKG-----------VRV----------- 61 (392)
Q Consensus 5 a~~IvIDnSesMr-ngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~-----------~~v----------- 61 (392)
+.+++||+|..-. +| =|++.++++...+... -.|+...||||||.... +..
T Consensus 162 ~yvFvIDvs~~a~~~g-----~l~~~~~sl~~~L~~l-p~~~~~~VG~ITfd~~vh~y~l~~~~~~~qmlvv~dl~d~f~ 235 (751)
T 3eh1_A 162 VYLFVLDVSHNAVEAG-----YLTILCQSLLENLDKL-PGDSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFL 235 (751)
T ss_dssp EEEEEEECSHHHHHHT-----HHHHHHHHHHHHTTTS-SCCTTCEEEEEEESSSEEEEECCTTCSSCEEEEESCTTCTTS
T ss_pred EEEEEEEccHhhhhhh-----HHHHHHHHHHHHHHhc-CCCcCcEEEEEEeCCEEEEEECCCCcccceeeccccccccCC
Confidence 4688999995432 22 2555666666655432 22344489999997521 111
Q ss_pred ------EECCCCCHHHHHHhhcccc---c---CCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChh------
Q 016296 62 ------LTTPTTDLGKILACMHELD---I---GGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRK------ 123 (392)
Q Consensus 62 ------lvtlT~D~~kil~~L~~i~---~---~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~------ 123 (392)
++++......|...|..+. . .....++.||++|..+|++ ..-||++|++++-+..++
T Consensus 236 P~~~~~lv~l~e~~~~i~~lL~~Lp~~~~~~~~~~~~~G~AL~aA~~ll~~-----~GGrI~~F~sg~pt~GpG~l~~r~ 310 (751)
T 3eh1_A 236 PTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSP-----TGGRVSVFQTQLPSLGAGLLQSRE 310 (751)
T ss_dssp CCGGGTSEETTTTHHHHHHHHHHGGGTSTTCSCCCCCHHHHHHHHHHHHTT-----TCEEEEEEECSCCCSSTTCCCCCC
T ss_pred CChhhhcccHHHHHHHHHHHHHhhhHhhcCCCCCccchHHHHHHHHHHhhc-----CCCEEEEEecCCCCCCCCcccccc
Confidence 2233344444444455542 1 2358899999999999975 567899999886653222
Q ss_pred -------------------hHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 124 -------------------VMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 124 -------------------~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
--.++|+++.+++|.||+..|+..- -...-+..+++.++
T Consensus 311 ~~~~~~~~ke~~~~~~a~~fY~~la~~~~~~~i~VDlF~~s~~~-~dlatl~~l~~~TG 368 (751)
T 3eh1_A 311 DPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQY-SDLASLACMSKYSA 368 (751)
T ss_dssp CSCGGGGSSSCTTCSCSCSHHHHHHHHHHHTTEEEEEEECCSSC-CCHHHHTHHHHTTT
T ss_pred ccccCCCchhhhhhcchHHHHHHHHHHHHhcCceEEEEEccCcc-cChHhHHHHHhhcC
Confidence 1368899999999999999999876 56777888887664
No 41
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=97.57 E-value=0.00048 Score=74.97 Aligned_cols=151 Identities=17% Similarity=0.171 Sum_probs=102.3
Q ss_pred eEEEEEeCCccc-cCCCCCCcHHHHHHHHHHHHHHhhhc----CCCCCcEEEEEecCC-----------Cce--------
Q 016296 5 ATMICIDNSEWM-RNGDYSPSRLRAQADAVSLICGAKTQ----SNPENTVGILTMGGK-----------GVR-------- 60 (392)
Q Consensus 5 a~~IvIDnSesM-rngD~~PtRl~aq~dav~~fv~~k~~----~NPes~VGLvtmag~-----------~~~-------- 60 (392)
+.+++||+|... .+|. +++.++++...+...-. ..+...||||||... .+.
T Consensus 179 ~y~FvIDvs~~av~sg~-----l~~~~~sl~~~L~~lP~~~~~~~~~~~VG~ITfd~~vh~y~l~~~~~q~q~~vv~d~~ 253 (770)
T 3efo_B 179 AFIFMIDVSYSNIKNGL-----VKLICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVG 253 (770)
T ss_dssp EEEEEEECSHHHHHTTH-----HHHHHHHHHHHGGGCCCCTTSSSCSCEEEEEEESSSEEEEECCTTCSSCEEEEECCTT
T ss_pred EEEEEEEcchhhccchH-----HHHHHHHHHHHHHhCCccccccCccceEEEEEeCCEEEEEeCCCcccCceEEEecccc
Confidence 567899999663 4443 77888888877765311 112369999999742 111
Q ss_pred ---------EEECCCCCHHHHHHhhccc------ccCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcC-CCCCChh-
Q 016296 61 ---------VLTTPTTDLGKILACMHEL------DIGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGS-PVKYDRK- 123 (392)
Q Consensus 61 ---------vlvtlT~D~~kil~~L~~i------~~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgS-p~~~d~~- 123 (392)
.|+++......|...|.+| ....++.++.+|+.|.++|++. +..-||++|.++ |.+..++
T Consensus 254 d~f~P~~~~~Lv~l~e~~~~i~~lL~~L~~~~~~~~~~~t~~g~al~aa~~~l~~~---~~GGkI~~F~s~lP~t~GpG~ 330 (770)
T 3efo_B 254 EVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGMEALKAA---DCPGKLFIFHSSLPTAEAPGK 330 (770)
T ss_dssp SCCCCCSSSSSBCTTTTHHHHHHHHHHHHHHHHTCCCCCCCCHHHHHHHHHHHHHH---TCCEEEEEEECSCCCSSSTTC
T ss_pred cccCCCccceeeeHHHHHHHHHHHHHhhHhhccCCCCCcchHHHHHHHHHHHhccC---CCCcEEEEEecCCCCcCCCcc
Confidence 1223333344444444443 2245778999999999999863 367799999988 6632121
Q ss_pred ------------------------hHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcC
Q 016296 124 ------------------------VMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNN 164 (392)
Q Consensus 124 ------------------------~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~ 164 (392)
--.++|+++.+++|.||+..|+..- -...-|..+++.++|
T Consensus 331 l~~r~~~~~~~t~ke~~~~~~a~~fY~~lA~~~~~~~i~VDlF~~s~~~-vdlatl~~l~~~TGG 394 (770)
T 3efo_B 331 LKNRDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAHGCSVTLFLFPSQY-VDVASLGLVPQLTGG 394 (770)
T ss_dssp CCCCCCCCCSSCSCGGGGGSCSSSHHHHHHHHHHHTTEEEEEEECCSSC-CCHHHHTHHHHHTTC
T ss_pred ccccccccccCCcchhhhhcchHHHHHHHHHHHHHcCeEEEEEEecCCc-cChHHHHHHHhhcCc
Confidence 1257899999999999999999876 577888889887753
No 42
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.40 E-value=0.00021 Score=76.97 Aligned_cols=158 Identities=15% Similarity=0.142 Sum_probs=100.7
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCC--------------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKG-------------------------- 58 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~-------------------------- 58 (392)
-+|+++|.|.||.. =|+..+..+..|+++.-..-...++|+.+|.++-
T Consensus 106 Dly~LmD~S~SM~d------di~~lk~l~~~l~~~l~~~t~~~r~GfgsFvDk~~~P~~~~~p~~~~~Pc~~~~~~c~~~ 179 (687)
T 3k6s_B 106 DLYYLMDLSYSMLD------DLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPP 179 (687)
T ss_dssp EEEEEEECSSTTHH------HHHTTTTCCTTHHHHHHSSCCSCEEEEEEECCCSSTTSSCCSSTTTTCCCCSCCCCCCCC
T ss_pred eEEEEEcCCcchHH------HHHHHHHHHHHHHHHHHhhCcCcEEeeEEeeccccCCccccCchhccCCCCCCCCCcCCc
Confidence 47899999999963 2344444455555555555667899999999842
Q ss_pred --ceEEECCCCCHHHHHHhhcccccCCcCcH----HHHHHHHHHHhcccCCCCCCcEEEEEEc-CCCCC--Ch-------
Q 016296 59 --VRVLTTPTTDLGKILACMHELDIGGEMNI----AAGIQVAQLALKHRQNKNQRQRIIVFAG-SPVKY--DR------- 122 (392)
Q Consensus 59 --~~vlvtlT~D~~kil~~L~~i~~~G~~sL----~~gL~vA~laLkhr~~k~~~~RIVvFvg-Sp~~~--d~------- 122 (392)
.+-..+||.|..++...++++.+.|+.+. ..||..|..--+...-+. ..|||||+. .+... |.
T Consensus 180 f~f~~~l~lt~~~~~F~~~v~~~~isgn~D~PE~g~dAl~qa~vc~~~igWr~-a~rllV~~TDa~~H~agDg~l~gi~~ 258 (687)
T 3k6s_B 180 FAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRN-VTRLLVFATDDGFHFAGDGKLGAILT 258 (687)
T ss_dssp CSCEEEEEEESCSHHHHHHHHTSCCCCCSSSSCCHHHHHHHHTTCHHHHCCCS-SCCEEEEECSSCCCCTTGGGGGTCCC
T ss_pred ccceeecccCCCHHHHHHHHhhccccCCCCCCchHHHHHHHHhhcccccCCcc-ceEEEEEECCCccccCCCccccceec
Confidence 22356899999999999999988876332 233333321012221223 667888774 32210 11
Q ss_pred ---------------------hhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCC
Q 016296 123 ---------------------KVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTG 176 (392)
Q Consensus 123 ---------------------~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g 176 (392)
..+..+.++|+++||.+.+..... ....++.|.+.+. ++.+.++-.+
T Consensus 259 pndg~Chl~~~~y~~s~~~DyPS~~ql~~~l~~~~I~~ifavt~~----~~~~y~~l~~~i~---~s~v~~L~~d 326 (687)
T 3k6s_B 259 PNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSR----MVKTYEKLTEIIP---KSAVGELSED 326 (687)
T ss_dssp CCCSCCCCSSSBCSSGGGSCCCCGGGHHHHHHHTTCBCCEEECGG----GHHHHHHHHHHSS---SCCEEECCTT
T ss_pred CCCCccccCCCccccccccCCCCHHHHHHHHHHcCCeEEEEEecc----chhhHHHHHhhcC---Cceeeeeccc
Confidence 126789999999999776666543 3468888887774 3445555443
No 43
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=97.28 E-value=0.0051 Score=63.26 Aligned_cols=159 Identities=13% Similarity=0.072 Sum_probs=106.6
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCC--------------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKG-------------------------- 58 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~-------------------------- 58 (392)
-+++++|.|.||.+ =++-.+.....|+++.-+.-...++|+.+|.++-
T Consensus 124 DLyyLmDlS~SM~d------dl~~lk~lg~~L~~~l~~~t~~~riGfGsFvDK~v~P~~~t~p~~~~nPC~~~~~c~~~f 197 (454)
T 3vi3_B 124 DLYYLMDLSYSMKD------DLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTTPF 197 (454)
T ss_dssp EEEEEEECSGGGHH------HHHHHTTHHHHHHHHHTTTCSSEEEEEEEECCCSSTTTSCCSTTTTTCCSCSSSCCCCCC
T ss_pred eEEEEecCCcchhh------HHHHHHHHHHHHHHHHHhcCCCeEEEEEEEeccccCCcccCChHHhcCCCcCccCCCCCc
Confidence 37899999999974 3556666777788777777778999999999862
Q ss_pred -ceEEECCCCCHHHHHHhhcccccCCcCcH----HHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCC-------------
Q 016296 59 -VRVLTTPTTDLGKILACMHELDIGGEMNI----AAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKY------------- 120 (392)
Q Consensus 59 -~~vlvtlT~D~~kil~~L~~i~~~G~~sL----~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~------------- 120 (392)
.+-..+||.|..++...+.++.+.|+-+. ..||..|..--+...-++ ..|+|||+....-.
T Consensus 198 ~fr~~l~LT~d~~~F~~~V~~~~isGn~D~PEgg~DAl~Qaavc~~~igWR~-a~rllV~~TDa~fH~agDgkL~GIv~P 276 (454)
T 3vi3_B 198 SYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLP 276 (454)
T ss_dssp SEEEEEEEESCHHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCS-SEEEEEEEESSCBCCTTTTGGGTCCSC
T ss_pred ceeeeeecCCCHHHHHHHHhhccccCCCcCCchhHHHHHHHhccccccCCcc-ceEEEEEECCCCcCcCCCccccceecC
Confidence 12367999999999999999999886333 234433332212222233 77888887432211
Q ss_pred ------------------ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCC
Q 016296 121 ------------------DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGP 177 (392)
Q Consensus 121 ------------------d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~ 177 (392)
|=-.+-.+.++|.++||.+-.---. .....++.|.+.+. +|.+.++..+.
T Consensus 277 NDg~CHL~~~~Yt~s~~~DYPSv~ql~~~l~e~nI~~IFAVt~----~~~~~Y~~L~~~ip---~s~vg~Ls~dS 344 (454)
T 3vi3_B 277 NDGQCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTE----EFQPVYKELKNLIP---KSAVGTLSANS 344 (454)
T ss_dssp CCCCCCEETTEECCTTTSCCCCHHHHHHHHHHTTEEEEEEEEG----GGHHHHHHHHHHST---TEEEEEECTTC
T ss_pred CCCccEeCCCcccccccCCCCCHHHHHHHHHhcCCcEEEEEcC----ccchHHHHHHHhCC---CceeeEccccc
Confidence 1124789999999999965332222 23467888887764 46676766654
No 44
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=97.13 E-value=0.0068 Score=62.65 Aligned_cols=160 Identities=11% Similarity=0.123 Sum_probs=105.2
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCc-------------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGV------------------------- 59 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~------------------------- 59 (392)
-+|+++|.|.||.+ =++..+.....|.++.-..-...++|+.+|.++-+
T Consensus 113 DLy~LmDlS~SM~d------dl~~lk~lg~~L~~~l~~~t~~~riGfgsFvDk~v~P~~~~~p~~~l~nPc~~~~~~c~p 186 (472)
T 3t3p_B 113 DIYYLMDLSYSMKD------DLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLP 186 (472)
T ss_dssp EEEEEEECSGGGHH------HHHHTTTHHHHHHHHHTTTCSCEEEEEEEECCCSSTTTSCCCSHHHHHCTTTTTTSCCCC
T ss_pred eEEEEEccCcchHH------HHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeccccCccccCChhhhhcCCCcccccCCCC
Confidence 37899999999974 35566666777777776677789999999998621
Q ss_pred ----eEEECCCCCHHHHHHhhcccccCCcCcH----HHHHHHHHHHhcccCCCCCCcEEEEEEcCCC-C-----------
Q 016296 60 ----RVLTTPTTDLGKILACMHELDIGGEMNI----AAGIQVAQLALKHRQNKNQRQRIIVFAGSPV-K----------- 119 (392)
Q Consensus 60 ----~vlvtlT~D~~kil~~L~~i~~~G~~sL----~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~-~----------- 119 (392)
+-..+||.|..++...++++.+.|+-+. ..||..|..--+...-+....|+|||++... .
T Consensus 187 ~f~fr~~l~LT~d~~~F~~~V~~~~iSGn~D~PEgg~dAl~qaavC~~~igWR~~a~rllV~~TDa~~H~agDgkL~GIv 266 (472)
T 3t3p_B 187 MFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIV 266 (472)
T ss_dssp CCSEEEEEEEESCHHHHHHHHHHCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCSSSEEEEEEEESSCBCCTTGGGGGTCC
T ss_pred CcceeEeeccCCCHHHHHHHHhhccccCCCCCCchHHHHHHHHhcchhhcCCCCCceEEEEEECCCCcCcCCCcccccee
Confidence 1257899999999999999988886333 3344444321122222235677888874321 1
Q ss_pred ------C--------------ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCC
Q 016296 120 ------Y--------------DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGP 177 (392)
Q Consensus 120 ------~--------------d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~ 177 (392)
+ |--.+-.+.++|.++||.+-.-- .. .....++.|.+.+. ++.+.++..+.
T Consensus 267 ~pnDg~CHL~~~~~Y~~s~~~DYPSv~ql~~~l~e~nI~~IFAV---t~-~~~~~Y~~L~~~ip---~s~vg~L~~dS 337 (472)
T 3t3p_B 267 QPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAV---TE-NVVNLYQNYSELIP---GTTVGVLSMDS 337 (472)
T ss_dssp CCCCCCCCBCTTCBBTTTTTSCCCCHHHHHHHHHHTTCEEEEEE---CG-GGHHHHHHHHHTST---TCEEEECCTTS
T ss_pred cCCCCceEECCCCcccccccCCCCCHHHHHHHHHhcCccEEEEE---ec-cchhHHHHHHHhCC---Cceeeeccccc
Confidence 0 11147889999999998643322 22 34567888877663 46666665554
No 45
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=96.93 E-value=0.013 Score=60.98 Aligned_cols=159 Identities=13% Similarity=0.117 Sum_probs=105.7
Q ss_pred eEEEEEeCCccccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCC--------------------------
Q 016296 5 ATMICIDNSEWMRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKG-------------------------- 58 (392)
Q Consensus 5 a~~IvIDnSesMrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~-------------------------- 58 (392)
-+|+++|.|.||.+ =++..+.....+.++.-..-...++|+.+|.++-
T Consensus 134 DLyyLmDlS~SM~d------dl~~lk~lg~~L~~~l~~~t~~~RiGfGsFvDK~v~P~~~~~p~~l~~PC~~~~~~c~p~ 207 (503)
T 3v4v_B 134 DLYYLMDLSYSMKD------DLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSP 207 (503)
T ss_dssp EEEEEEECSGGGHH------HHHHHHHSSHHHHHHHTTTCSCEEEEEEEECCCSSTTTSCCCHHHHHCCSSCSSSCCCCC
T ss_pred eEEEEEecCcchhh------HHHHHHHHHHHHHHHHHhhCcCcEEeeeeecccccCCcccCCHHHhcCCCcCCCCCCCCC
Confidence 37999999999974 3556777778888887777788999999998851
Q ss_pred --ceEEECCCCCHHHHHHhhcccccCCcCcH----HHHHHHHHHHhcccCCCCCCcEEEEEEcCCC-C------------
Q 016296 59 --VRVLTTPTTDLGKILACMHELDIGGEMNI----AAGIQVAQLALKHRQNKNQRQRIIVFAGSPV-K------------ 119 (392)
Q Consensus 59 --~~vlvtlT~D~~kil~~L~~i~~~G~~sL----~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~-~------------ 119 (392)
.+-+.+||.|..++...++++.+.|+-+. ..||..|..--+...=+. ..|+|||+.... .
T Consensus 208 f~fr~~l~LT~d~~~F~~~V~~~~iSGnlD~PEggfDAlmQaavC~~~IgWR~-a~rllV~~TDA~fH~agDgkLaGIv~ 286 (503)
T 3v4v_B 208 FSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRN-VSRLLVFTSDDTFHTAGDGKLGGIFM 286 (503)
T ss_dssp CSEEEEEEEESCSHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCS-SEEEEEEEESSCBCCTTGGGTTTCCS
T ss_pred cceEEEEEecCCHHHHHHHHhhcCccCCCCCCchHHHHHHHHhhcccccCCCc-ceEEEEEECCCCcCcCCCccccceec
Confidence 12257899999999999999998886433 234443332112211122 568888874321 1
Q ss_pred -----C--------------ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCC
Q 016296 120 -----Y--------------DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGP 177 (392)
Q Consensus 120 -----~--------------d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~ 177 (392)
+ |--.+-.+.++|.++||.+- |.-.. .....++.|.+.+. ++.+.++..+.
T Consensus 287 pNDg~CHL~~~~~Yt~s~~~DYPSv~ql~~kL~ennI~~I---FAVt~-~~~~~Y~~L~~~ip---~s~vg~Ls~dS 356 (503)
T 3v4v_B 287 PSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPI---FAVTS-AALPVYQELSKLIP---KSAVGELSEDS 356 (503)
T ss_dssp CCCSSCCBCTTSBBGGGGGSCCCCHHHHHHHHHHHTEEEE---EEECS-SSHHHHHHHHTTST---TCEEEECCTTS
T ss_pred CCCCCeEECCCCccccccccCCCCHHHHHHHHHhcCCeEE---EEEcc-cchhHHHHHHHhCC---CceeeEccccc
Confidence 0 11136789999999999443 44333 34578888876663 46666666554
No 46
>1p9c_A 26S proteasome non-ATPase regulatory subunit 4; alpha helix, hairpin loop, ligand binding protein; NMR {Homo sapiens} SCOP: j.105.1.1 PDB: 1p9d_S 1uel_B
Probab=96.86 E-value=0.00033 Score=50.40 Aligned_cols=21 Identities=33% Similarity=0.550 Sum_probs=18.4
Q ss_pred CCCChHHHHHHHHHcccCCCC
Q 016296 321 KATDEDKELALALQMSMQDDT 341 (392)
Q Consensus 321 ~~~~ee~~ia~A~~ms~~~~~ 341 (392)
..|+||++|++|||||||+.+
T Consensus 17 ~~mteeeqla~ALqMSmq~~~ 37 (45)
T 1p9c_A 17 SSMTEEEQIAYAMQMSLQGAE 37 (45)
T ss_dssp HHHHHHHHHHHHHHHHTSSSS
T ss_pred hccCchHHHHHHHHhcccccc
Confidence 478999999999999999764
No 47
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=96.77 E-value=0.0036 Score=59.53 Aligned_cols=73 Identities=7% Similarity=0.102 Sum_probs=51.6
Q ss_pred CCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCC---CcHHHHHHHHHHHcCCCCceEEEecCCChhhh
Q 016296 105 NQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDD---GKPEKLEALLAAVNNNDSSHLVHVPTGPNALS 181 (392)
Q Consensus 105 ~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~---~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~lLs 181 (392)
...+.||++.++..++.. +...+|+.+++.||+|++||||.... ...+.|+.+.+.+ +|.||.. .. .-|+
T Consensus 8 ~~~k~iillTDG~~~~g~-~p~~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~IA~~t---GG~yf~a-~~--~~l~ 80 (242)
T 3rag_A 8 ATIRQILVITDGCSNIGP-DPVEAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSIADAG---GGMCRIV-QP--ADIS 80 (242)
T ss_dssp CCEEEEEEEESSCCCSSS-CHHHHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHHHHHT---TSCEEEE-CG--GGHH
T ss_pred CCccEEEEEccCCCCCCC-CHHHHHHHHHHCCCEEEEEEecCCccccchhHHHHHHHHHhc---CCeEEEe-eH--HHHH
Confidence 355667888888766543 78899999999999999999976421 2246899998766 4566664 33 2466
Q ss_pred hhh
Q 016296 182 DVL 184 (392)
Q Consensus 182 D~l 184 (392)
+.|
T Consensus 81 ~~~ 83 (242)
T 3rag_A 81 ATA 83 (242)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 48
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=95.78 E-value=0.0047 Score=49.58 Aligned_cols=51 Identities=22% Similarity=0.429 Sum_probs=35.6
Q ss_pred CChHHHHHHHHhhccCCCCCCC---C-Cc--c----c-CCCCCCChHHHHHHHHHcccCCCC
Q 016296 291 DEEKSLLERAFAMSMGTSVSDT---S-MA--D----A-DTSKATDEDKELALALQMSMQDDT 341 (392)
Q Consensus 291 ~~e~~~L~~Al~~S~~~~~~~~---~-~~--~----~-~~~~~~~ee~~ia~A~~ms~~~~~ 341 (392)
+++|+.|++||.||+++..... + .+ . . ....+.+||++|+.||+.||.+.+
T Consensus 9 ~~eDeDLkrAieLSL~Es~~~~~~~~yvp~~~~~~~~~~~~~~edeD~DLKAAIaASLrd~E 70 (81)
T 1q0v_A 9 EDEEELIRKAIELSLKESRNSASSEPIVPVVESKNEVKRQEIEEEEDPDLKAAIQESLREAE 70 (81)
T ss_dssp SSHHHHHHHHHHHHHHCCCCCSCCCCCCCCCCCCCCCCCCCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHhHHHHcCCCCCCCCCCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHH
Confidence 5799999999999998764331 1 00 0 0 111245778999999999997643
No 49
>2klz_A Ataxin-3; UIM, ubiquitin-binding, hydrolase, neurodegenerati nucleus, phosphoprotein, spinocerebellar ataxia, transcript transcription regulation; NMR {Homo sapiens}
Probab=94.45 E-value=0.021 Score=41.63 Aligned_cols=21 Identities=38% Similarity=0.502 Sum_probs=18.1
Q ss_pred CCCChHHHHHHHHhhccCCCC
Q 016296 289 PMDEEKSLLERAFAMSMGTSV 309 (392)
Q Consensus 289 ~~~~e~~~L~~Al~~S~~~~~ 309 (392)
+++||++-|++|+.|||+...
T Consensus 22 dmEDeeadLrrAiqLSmQGss 42 (52)
T 2klz_A 22 DMEDEEADLRRAIQLSMQGSS 42 (52)
T ss_dssp CCSSSHHHHHHHHHHHHTTCC
T ss_pred ccchhHHHHHHHHHHHhhccc
Confidence 456899999999999999774
No 50
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=93.54 E-value=0.014 Score=46.78 Aligned_cols=21 Identities=14% Similarity=0.249 Sum_probs=17.9
Q ss_pred CCCCCCCHHHHHHHHhcHHHH
Q 016296 218 GVDPNIDPELALALRVSMEEE 238 (392)
Q Consensus 218 gvDp~~DPELa~Alr~SlEEe 238 (392)
.++-..|.+|..||.|||+|-
T Consensus 6 ~~~~~eDeDLkrAieLSL~Es 26 (81)
T 1q0v_A 6 STPEDEEELIRKAIELSLKES 26 (81)
T ss_dssp CCCSSHHHHHHHHHHHHHHCC
T ss_pred ccccCchHHHHHHHHHhHHHH
Confidence 456677999999999999985
No 51
>1yx4_A 26S proteasome non-ATPase regulatory subunit 4; polyubiquitin, UIM, hydrolase; NMR {Homo sapiens} PDB: 1yx5_A 1yx6_A 2kde_A 2kdf_A
Probab=93.21 E-value=0.038 Score=47.98 Aligned_cols=93 Identities=20% Similarity=0.186 Sum_probs=46.6
Q ss_pred cCCCCCCccCCCCCCCHHHHHHHHhc--HHHHHHHHHHHHHHhhhhhcccCCCCCCccCcc--ccccccCCCCCcccccc
Q 016296 209 AGGVSDFDFGVDPNIDPELALALRVS--MEEERARQEAAAKRAADEASRQGKEEEPLSNSQ--DATMTDNTNNTAAETTE 284 (392)
Q Consensus 209 ~~~~~~~efgvDp~~DPELa~Alr~S--lEEe~~rq~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 284 (392)
++-..+++-.+||++==-|+|-|.-- -+|..+|+..+...+....+. ........+ ...+.... .. ...
T Consensus 28 ~~fefgvDp~~DPeLa~ALr~Smeee~~Rqe~~~~~~~e~saa~~~~a~---~~~~~~eeamL~~a~~~~~---~~-~~~ 100 (132)
T 1yx4_A 28 SDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAAASAAEAGIAT---TGTEDSDDALLKMTISQQE---FG-RTG 100 (132)
T ss_dssp SSCCSCSCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSC---CCCCSCHHHHHHHHHHHHH---HH-HSS
T ss_pred cccccCCCCCcCHHHHHHHHHhHHHHHHHHHHHHHhhcccccccccccc---cCCcccHHHHHHHhhcccc---cC-CCC
Confidence 34456788889999999999997433 333333433333322221111 111000000 00000000 00 000
Q ss_pred CCCCCCCChHHHHHHHHhhccCCC
Q 016296 285 KTADPMDEEKSLLERAFAMSMGTS 308 (392)
Q Consensus 285 ~~~~~~~~e~~~L~~Al~~S~~~~ 308 (392)
..+..+++||++|++||+|||++.
T Consensus 101 ~~d~~~MtEEeqLa~ALqMSMQe~ 124 (132)
T 1yx4_A 101 LPDLSSMTEEEQIAYAMQMSLQGA 124 (132)
T ss_dssp CCCSTTSCHHHHHHHHHHHSSSSC
T ss_pred CCchhhCChHHHHHHHHHhccccc
Confidence 112345789999999999999976
No 52
>3a1q_C Ubiquitin interaction motif-containing protein 1; protein complex, cytoplasm, nucleus, phosphoprotein, UBL conjugation, transcription regulation; 2.20A {Mus musculus}
Probab=91.91 E-value=0.16 Score=35.74 Aligned_cols=14 Identities=43% Similarity=0.622 Sum_probs=11.3
Q ss_pred ChHHHHHHHHhhcc
Q 016296 292 EEKSLLERAFAMSM 305 (392)
Q Consensus 292 ~e~~~L~~Al~~S~ 305 (392)
.||.+|++|++-|+
T Consensus 30 ~EdellrKAIaESL 43 (45)
T 3a1q_C 30 KEEELLRKAIAESL 43 (45)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 46789999998875
No 53
>2rr9_C Putative uncharacterized protein UIMC1; Lys63-linked diubiquitin, ubiquitin-interacting motif, ubiqu RAP80, DNA repair, nuclear protein; NMR {Homo sapiens}
Probab=91.37 E-value=0.23 Score=35.11 Aligned_cols=16 Identities=44% Similarity=0.634 Sum_probs=13.2
Q ss_pred ChHHHHHHHHhhccCC
Q 016296 292 EEKSLLERAFAMSMGT 307 (392)
Q Consensus 292 ~e~~~L~~Al~~S~~~ 307 (392)
.||.+|++|++-|+..
T Consensus 27 ~E~~llrKAIaESLn~ 42 (46)
T 2rr9_C 27 EEEELLRKAIAESLNS 42 (46)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4788999999998754
No 54
>3a1q_C Ubiquitin interaction motif-containing protein 1; protein complex, cytoplasm, nucleus, phosphoprotein, UBL conjugation, transcription regulation; 2.20A {Mus musculus}
Probab=82.67 E-value=0.35 Score=34.05 Aligned_cols=19 Identities=42% Similarity=0.585 Sum_probs=16.9
Q ss_pred CCChHHHHHHHHHcccCCC
Q 016296 322 ATDEDKELALALQMSMQDD 340 (392)
Q Consensus 322 ~~~ee~~ia~A~~ms~~~~ 340 (392)
.|+||+++|.|+.||-|+.
T Consensus 3 ~mtEEEq~ALA~rmSeQEA 21 (45)
T 3a1q_C 3 LGSEEEQFALALKMSEQEA 21 (45)
T ss_dssp CSCHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHhHHHH
Confidence 6899999999999998864
No 55
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=82.07 E-value=6.1 Score=32.38 Aligned_cols=25 Identities=20% Similarity=0.290 Sum_probs=18.0
Q ss_pred CCCCCCCHHHHHHHHhcHHHHHHHH
Q 016296 218 GVDPNIDPELALALRVSMEEERARQ 242 (392)
Q Consensus 218 gvDp~~DPELa~Alr~SlEEe~~rq 242 (392)
.++|..-.+|+-+|+.-++....|+
T Consensus 121 ~~~~~~~~~l~~~i~~l~~~~~~~~ 145 (166)
T 3qhp_A 121 LFEPNNAKDLSAKIDWWLENKLERE 145 (166)
T ss_dssp EECTTCHHHHHHHHHHHHHCHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHhCHHHHH
Confidence 4677777789999988877554443
No 56
>2rr9_C Putative uncharacterized protein UIMC1; Lys63-linked diubiquitin, ubiquitin-interacting motif, ubiqu RAP80, DNA repair, nuclear protein; NMR {Homo sapiens}
Probab=81.82 E-value=0.35 Score=34.17 Aligned_cols=18 Identities=44% Similarity=0.639 Sum_probs=16.3
Q ss_pred CChHHHHHHHHHcccCCC
Q 016296 323 TDEDKELALALQMSMQDD 340 (392)
Q Consensus 323 ~~ee~~ia~A~~ms~~~~ 340 (392)
|+||+++|.|+.||-|+.
T Consensus 1 MtEEEq~ALA~kmSeQEA 18 (46)
T 2rr9_C 1 MTEEEQFALALKMSEQEA 18 (46)
T ss_dssp CCSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhHHHH
Confidence 789999999999998864
No 57
>1p9c_A 26S proteasome non-ATPase regulatory subunit 4; alpha helix, hairpin loop, ligand binding protein; NMR {Homo sapiens} SCOP: j.105.1.1 PDB: 1p9d_S 1uel_B
Probab=77.87 E-value=1.2 Score=31.89 Aligned_cols=18 Identities=22% Similarity=0.250 Sum_probs=15.8
Q ss_pred CChHHHHHHHHhhccCCC
Q 016296 291 DEEKSLLERAFAMSMGTS 308 (392)
Q Consensus 291 ~~e~~~L~~Al~~S~~~~ 308 (392)
++||+.|+.||+|||++.
T Consensus 19 mteeeqla~ALqMSmq~~ 36 (45)
T 1p9c_A 19 MTEEEQIAYAMQMSLQGA 36 (45)
T ss_dssp HHHHHHHHHHHHHHTSSS
T ss_pred cCchHHHHHHHHhccccc
Confidence 578888999999999966
No 58
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=66.74 E-value=20 Score=33.55 Aligned_cols=127 Identities=13% Similarity=0.144 Sum_probs=64.2
Q ss_pred cEEEEEEcCCCCC-ChhhHHHHHHHHHhC-CceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCChhhhhhhh
Q 016296 108 QRIIVFAGSPVKY-DRKVMEMIGKKLKKN-SVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGPNALSDVLI 185 (392)
Q Consensus 108 ~RIVvFvgSp~~~-d~~~l~~~ak~LKkn-nI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~lLsD~l~ 185 (392)
..+|+|+|..... ....+.++++++++. ++++.+||-|.. .+.|+.+++..+-.+ ++..+.+.. -+.+.+.
T Consensus 211 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~----~~~l~~~~~~~~l~~--~v~~~g~~~-~~~~~~~ 283 (394)
T 2jjm_A 211 EKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPE----FCTILQLVKNLHIED--RVLFLGKQD-NVAELLA 283 (394)
T ss_dssp -CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTT----HHHHHHHHHTTTCGG--GBCCCBSCS-CTHHHHH
T ss_pred CeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchH----HHHHHHHHHHcCCCC--eEEEeCchh-hHHHHHH
Confidence 4578888886543 455677788888765 677777765543 357888887653222 222232322 2455555
Q ss_pred cCCccc----CCCCCCCchhHHHHhh-----hcCCCCC------CccCCCCCCCHHHHHHHHhcHHHHHHH
Q 016296 186 SSPVFT----ADGEGGSGFAAAAAAA-----AAGGVSD------FDFGVDPNIDPELALALRVSMEEERAR 241 (392)
Q Consensus 186 sspi~~----~~~~~~~~~~~~~~~~-----~~~~~~~------~efgvDp~~DPELa~Alr~SlEEe~~r 241 (392)
.+.|+- .|+.+..-..+...|. ..+|... ..|=++|..-.+|+-+|+.-++....|
T Consensus 284 ~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~ 354 (394)
T 2jjm_A 284 MSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELH 354 (394)
T ss_dssp TCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHH
T ss_pred hCCEEEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHHH
Confidence 554432 2221100011111111 0111111 112256666678999998877654443
No 59
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=65.26 E-value=10 Score=31.90 Aligned_cols=48 Identities=17% Similarity=0.102 Sum_probs=29.3
Q ss_pred CcEEEEEEcCCCCCChhhHHHHHHHHHh-CCceEEEEEeCCCCCCcHHHHHHHHH
Q 016296 107 RQRIIVFAGSPVKYDRKVMEMIGKKLKK-NSVAIDIVNFGEDDDGKPEKLEALLA 160 (392)
Q Consensus 107 ~~RIVvFvgSp~~~d~~~l~~~ak~LKk-nnI~VdiI~fG~e~~~n~~~l~~~~~ 160 (392)
.+++|+|+|.... .+.+..+++.+++ .++++.+||-|.... .++.+++
T Consensus 22 ~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~----~l~~~~~ 70 (177)
T 2f9f_A 22 YGDFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGD----HAERYAR 70 (177)
T ss_dssp CCSCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTS----THHHHHH
T ss_pred CCCEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHH----HHHHHHH
Confidence 3446888887543 3444444444443 378888888777652 5666666
No 60
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=61.49 E-value=31 Score=31.64 Aligned_cols=76 Identities=13% Similarity=0.163 Sum_probs=45.1
Q ss_pred CcEEEEEEcCCCCC-ChhhHHHHHHHHHhC---CceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCChhhhh
Q 016296 107 RQRIIVFAGSPVKY-DRKVMEMIGKKLKKN---SVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGPNALSD 182 (392)
Q Consensus 107 ~~RIVvFvgSp~~~-d~~~l~~~ak~LKkn---nI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~lLsD 182 (392)
.+.+|+|+|..... ....+.++++++++. ++.+.+||-|.. +.++.+++..+-.+ ++..+.... -+.+
T Consensus 195 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~-----~~~~~~~~~~~~~~--~v~~~g~~~-~~~~ 266 (374)
T 2iw1_A 195 QQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP-----RKFEALAEKLGVRS--NVHFFSGRN-DVSE 266 (374)
T ss_dssp TCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC-----HHHHHHHHHHTCGG--GEEEESCCS-CHHH
T ss_pred CCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH-----HHHHHHHHHcCCCC--cEEECCCcc-cHHH
Confidence 45688899875443 444566666666554 788888777642 47888887764222 333333322 3556
Q ss_pred hhhcCCcc
Q 016296 183 VLISSPVF 190 (392)
Q Consensus 183 ~l~sspi~ 190 (392)
.+..+.++
T Consensus 267 ~~~~ad~~ 274 (374)
T 2iw1_A 267 LMAAADLL 274 (374)
T ss_dssp HHHHCSEE
T ss_pred HHHhcCEE
Confidence 66555553
No 61
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=60.55 E-value=59 Score=30.69 Aligned_cols=79 Identities=9% Similarity=0.157 Sum_probs=44.1
Q ss_pred CcEEEEEEcCCCCC-ChhhHHHHHHHHHhC----CceEEEEEe----CCCCCCcHHHHHHHHHHHcCCCCceEEEecCCC
Q 016296 107 RQRIIVFAGSPVKY-DRKVMEMIGKKLKKN----SVAIDIVNF----GEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGP 177 (392)
Q Consensus 107 ~~RIVvFvgSp~~~-d~~~l~~~ak~LKkn----nI~VdiI~f----G~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~ 177 (392)
.+.+|+|+|..... ....+.++++++++. ++++.|||- |... +.|+.+++..+-.++=+++---+.
T Consensus 242 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~----~~l~~~~~~~~l~~~v~~~g~~~~- 316 (438)
T 3c48_A 242 HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATP----DTYRHMAEELGVEKRIRFLDPRPP- 316 (438)
T ss_dssp SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC----------CHHHHHHHHTTCTTTEEEECCCCH-
T ss_pred CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHH----HHHHHHHHHcCCCCcEEEcCCCCh-
Confidence 45678888885443 455677888888765 677777775 4333 478888877653333233211111
Q ss_pred hhhhhhhhcCCcc
Q 016296 178 NALSDVLISSPVF 190 (392)
Q Consensus 178 ~lLsD~l~sspi~ 190 (392)
.-+.+.+..+.|+
T Consensus 317 ~~~~~~~~~adv~ 329 (438)
T 3c48_A 317 SELVAVYRAADIV 329 (438)
T ss_dssp HHHHHHHHHCSEE
T ss_pred HHHHHHHHhCCEE
Confidence 2345555555443
No 62
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=58.66 E-value=45 Score=30.00 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=46.7
Q ss_pred CCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEec
Q 016296 106 QRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVP 174 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp 174 (392)
..-++.|+.|| +.|-..+.++++.|++.+|..++--.|.. ...+++..|++.....+-.-+|.+-
T Consensus 11 ~~P~V~IimGS--~SD~~v~~~a~~~l~~~gi~~ev~V~saH--R~p~~l~~~~~~a~~~g~~ViIa~A 75 (173)
T 4grd_A 11 SAPLVGVLMGS--SSDWDVMKHAVAILQEFGVPYEAKVVSAH--RMPDEMFDYAEKARERGLRAIIAGA 75 (173)
T ss_dssp SSCSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred CCCeEEEEeCc--HhHHHHHHHHHHHHHHcCCCEEEEEEccc--cCHHHHHHHHHHHHhcCCeEEEEec
Confidence 33457777788 44677889999999999999886666654 4788999999887654434454443
No 63
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=56.42 E-value=41 Score=30.30 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=44.0
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEec
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVP 174 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp 174 (392)
++.|+.|| +.|-....++++.|++.||.+++--.|.. ...+.+..|++.....+-.-+|.+-
T Consensus 14 ~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~ev~V~SaH--R~p~~~~~~~~~a~~~g~~ViIa~A 75 (174)
T 3kuu_A 14 KIAIVMGS--KSDWATMQFAADVLTTLNVPFHVEVVSAH--RTPDRLFSFAEQAEANGLHVIIAGN 75 (174)
T ss_dssp CEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTT--TCHHHHHHHHHHTTTTTCSEEEEEE
T ss_pred cEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEccc--CCHHHHHHHHHHHHhCCCcEEEEEC
Confidence 47777787 34677788999999999999886666644 5788999998766543333444443
No 64
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=55.99 E-value=18 Score=30.82 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=35.0
Q ss_pred CCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 106 QRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
..++|+|+.+|+...+++-...+++.|++.++.|.++.+...
T Consensus 3 ~~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~ 44 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAA 44 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCc
Confidence 345788888998766777778889999999999999999876
No 65
>2d3g_P Ubiquitin interacting motif from hepatocyte growth factor-regulated tyrosine kinase...; protein-protein complex, UIM and ubiquitin; 1.70A {Bos taurus}
Probab=55.45 E-value=7.6 Score=24.58 Aligned_cols=17 Identities=41% Similarity=0.522 Sum_probs=12.5
Q ss_pred HHHHHHHHhcHHHHHHH
Q 016296 225 PELALALRVSMEEERAR 241 (392)
Q Consensus 225 PELa~Alr~SlEEe~~r 241 (392)
-||++||-+|+-|..+|
T Consensus 5 EEl~LAlAlS~sEae~~ 21 (26)
T 2d3g_P 5 EELQLALALSQSEAEEK 21 (26)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 47888888888776654
No 66
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=54.82 E-value=47 Score=29.60 Aligned_cols=62 Identities=13% Similarity=0.180 Sum_probs=42.1
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEe
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHV 173 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~v 173 (392)
.++.|+.|| +.|-....++++.|++.||..++--.|.. ...+.+..|.+.....+-.-+|.+
T Consensus 4 ~~V~Iimgs--~SD~~v~~~a~~~l~~~gi~~ev~V~SaH--R~p~~~~~~~~~a~~~g~~ViIa~ 65 (163)
T 3ors_A 4 MKVAVIMGS--SSDWKIMQESCNMLDYFEIPYEKQVVSAH--RTPKMMVQFASEARERGINIIIAG 65 (163)
T ss_dssp CCEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHHHHHHHTTTTTCCEEEEE
T ss_pred CeEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEECCc--CCHHHHHHHHHHHHhCCCcEEEEE
Confidence 347777777 34677788888899999999776555533 578888888876654333344443
No 67
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=54.36 E-value=58 Score=30.62 Aligned_cols=83 Identities=16% Similarity=0.087 Sum_probs=50.3
Q ss_pred CcEEEEEEcCCCCC-ChhhHHHHHHHHHhC--CceEEEEEeCCCCC-CcHHHHHHHHHHHcCCCCceEEE-ecCCC-hhh
Q 016296 107 RQRIIVFAGSPVKY-DRKVMEMIGKKLKKN--SVAIDIVNFGEDDD-GKPEKLEALLAAVNNNDSSHLVH-VPTGP-NAL 180 (392)
Q Consensus 107 ~~RIVvFvgSp~~~-d~~~l~~~ak~LKkn--nI~VdiI~fG~e~~-~n~~~l~~~~~~vn~~d~Sh~v~-vp~g~-~lL 180 (392)
.+.+|+|+|..... ....+.++++.+++. ++++.|||-|.... ...+.|+.+++..+..++=+++- ++.-+ ..+
T Consensus 230 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 230 EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREV 309 (416)
T ss_dssp TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHH
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHH
Confidence 44578898875543 456778888888765 78888888886531 12457888888776544444443 33211 224
Q ss_pred hhhhhcCCc
Q 016296 181 SDVLISSPV 189 (392)
Q Consensus 181 sD~l~sspi 189 (392)
.+.+..+.+
T Consensus 310 ~~~~~~ad~ 318 (416)
T 2x6q_A 310 NAFQRASDV 318 (416)
T ss_dssp HHHHHHCSE
T ss_pred HHHHHhCCE
Confidence 555544444
No 68
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=53.49 E-value=63 Score=28.63 Aligned_cols=52 Identities=21% Similarity=0.229 Sum_probs=37.4
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcC
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNN 164 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~ 164 (392)
++.|+.|| +.|-....++++.|++.||..++--.|.. ...+.+..|.+....
T Consensus 4 ~V~Iimgs--~SD~~v~~~a~~~l~~~gi~~ev~V~saH--R~p~~~~~~~~~a~~ 55 (159)
T 3rg8_A 4 LVIILMGS--SSDMGHAEKIASELKTFGIEYAIRIGSAH--KTAEHVVSMLKEYEA 55 (159)
T ss_dssp EEEEEESS--GGGHHHHHHHHHHHHHTTCEEEEEECCTT--TCHHHHHHHHHHHHT
T ss_pred eEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEccc--CCHHHHHHHHHHhhh
Confidence 46677777 34667788888888888988775555533 578888888876654
No 69
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=53.37 E-value=54 Score=31.64 Aligned_cols=78 Identities=5% Similarity=-0.059 Sum_probs=48.5
Q ss_pred cEEEEEEcCCCCC-ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCChhhhhhhhc
Q 016296 108 QRIIVFAGSPVKY-DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGPNALSDVLIS 186 (392)
Q Consensus 108 ~RIVvFvgSp~~~-d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~lLsD~l~s 186 (392)
..+|+|+|..... ....+.++++++++.++++.|||-|... -.+.|+.+++..+ ++-++ ......+.+.+.+..
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~--~~~~l~~~~~~~~--~~v~~-~~g~~~~~~~~~~~~ 365 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVA--LEGALLAAASRHH--GRVGV-AIGYNEPLSHLMQAG 365 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHH--HHHHHHHHHHHTT--TTEEE-EESCCHHHHHHHHHH
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchH--HHHHHHHHHHhCC--CcEEE-ecCCCHHHHHHHHhc
Confidence 3488899986543 4556778888888889999999987531 1357888887652 33221 222223344555555
Q ss_pred CCcc
Q 016296 187 SPVF 190 (392)
Q Consensus 187 spi~ 190 (392)
+.++
T Consensus 366 adv~ 369 (485)
T 1rzu_A 366 CDAI 369 (485)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 5543
No 70
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=53.15 E-value=23 Score=31.58 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=43.6
Q ss_pred cEEEEEEcCCCCCC-hhhHHHHHHHHHhCCceEEEEEeCCCCC-------CcHHHHHHHHHHHcCCCCceEEEecC
Q 016296 108 QRIIVFAGSPVKYD-RKVMEMIGKKLKKNSVAIDIVNFGEDDD-------GKPEKLEALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 108 ~RIVvFvgSp~~~d-~~~l~~~ak~LKknnI~VdiI~fG~e~~-------~n~~~l~~~~~~vn~~d~Sh~v~vp~ 175 (392)
++|+|++||+.... ...+.+.+.++.+.++.|.+|.+.+--. +..+..++|.+.+..-| .+|.+-|
T Consensus 3 k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD--~~ii~tP 76 (190)
T 3u7r_A 3 KTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSD--AVLAITP 76 (190)
T ss_dssp EEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSS--EEEEECC
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCC--cEEEech
Confidence 57899999987652 3446666667777899999999875110 12356777888887544 3444444
No 71
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=53.02 E-value=48 Score=29.75 Aligned_cols=65 Identities=11% Similarity=0.123 Sum_probs=45.5
Q ss_pred CCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEec
Q 016296 106 QRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVP 174 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp 174 (392)
-+.++.|+.|| +.|-....++++.|++.||..++--.|.. ...+.+.+|.+.....+-.-||.+-
T Consensus 10 ~~~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH--R~p~~l~~~~~~a~~~g~~ViIa~A 74 (170)
T 1xmp_A 10 MKSLVGVIMGS--TSDWETMKYACDILDELNIPYEKKVVSAH--RTPDYMFEYAETARERGLKVIIAGA 74 (170)
T ss_dssp -CCSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHHHHHHHTTTTTCCEEEEEE
T ss_pred CCCcEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEecc--CCHHHHHHHHHHHHhCCCcEEEEEC
Confidence 34457777787 44677888999999999999886666644 5788999998766543334444443
No 72
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=52.15 E-value=14 Score=31.75 Aligned_cols=40 Identities=10% Similarity=0.073 Sum_probs=31.4
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
++|+|+.+|+...+..-...+++.+++.++.|.++.+.+.
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~ 45 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAV 45 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCCE
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhhc
Confidence 3688999998444555566778888889999999998764
No 73
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=51.57 E-value=97 Score=27.64 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=44.6
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecC
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~ 175 (392)
++.|+.|| +.|-....++++.|++.||..++--.|.. .+.+.+..|++.....+-.-+|.+--
T Consensus 7 ~V~IimgS--~SD~~v~~~a~~~l~~~gi~~ev~V~SaH--Rtp~~l~~~~~~~~~~g~~ViIa~AG 69 (166)
T 3oow_A 7 QVGVIMGS--KSDWSTMKECCDILDNLGIGYECEVVSAH--RTPDKMFDYAETAKERGLKVIIAGAG 69 (166)
T ss_dssp EEEEEESS--GGGHHHHHHHHHHHHHTTCEEEEEECCTT--TCHHHHHHHHHHTTTTTCCEEEEEEC
T ss_pred eEEEEECc--HHhHHHHHHHHHHHHHcCCCEEEEEEcCc--CCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 57777787 34677788999999999998886666643 57888999988775433344444443
No 74
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=51.55 E-value=15 Score=30.27 Aligned_cols=40 Identities=8% Similarity=0.282 Sum_probs=31.8
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
++|+|+.+|....++.-...+++.|++.++.|+++.+.+.
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~ 41 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA 41 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC
Confidence 3678888887555666677888999999999999998764
No 75
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=51.15 E-value=66 Score=29.17 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=45.5
Q ss_pred CCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEec
Q 016296 105 NQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVP 174 (392)
Q Consensus 105 ~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp 174 (392)
+|-..+.|+.|| +.|-.-..++++.|++.||..++--.|.. ...+.+..|.+.....+-.-+|.+-
T Consensus 11 ~~~~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH--R~p~~l~~~~~~a~~~g~~ViIa~A 76 (183)
T 1o4v_A 11 HHVPRVGIIMGS--DSDLPVMKQAAEILEEFGIDYEITIVSAH--RTPDRMFEYAKNAEERGIEVIIAGA 76 (183)
T ss_dssp ---CEEEEEESC--GGGHHHHHHHHHHHHHTTCEEEEEECCTT--TCHHHHHHHHHHTTTTTCCEEEEEE
T ss_pred cCCCeEEEEecc--HHHHHHHHHHHHHHHHcCCCeEEEEEccc--CCHHHHHHHHHHHHhCCCcEEEEec
Confidence 455567777787 44677888999999999999877666654 4788999998866543333444443
No 76
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=50.90 E-value=43 Score=30.78 Aligned_cols=48 Identities=15% Similarity=0.101 Sum_probs=32.7
Q ss_pred cEEEEEEcCCCCC-ChhhHHHHHHHHHhC--CceEEEEEeCCCCCCcHHHHHHHH
Q 016296 108 QRIIVFAGSPVKY-DRKVMEMIGKKLKKN--SVAIDIVNFGEDDDGKPEKLEALL 159 (392)
Q Consensus 108 ~RIVvFvgSp~~~-d~~~l~~~ak~LKkn--nI~VdiI~fG~e~~~n~~~l~~~~ 159 (392)
..+|+|+|..... ....+.+++++|++. ++++.|||-|.. .+.++.++
T Consensus 198 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~----~~~l~~~~ 248 (394)
T 3okp_A 198 TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRY----ESTLRRLA 248 (394)
T ss_dssp CCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTT----HHHHHHHT
T ss_pred ceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchH----HHHHHHHH
Confidence 3678899986443 556677888888775 677777765533 35777776
No 77
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=50.80 E-value=20 Score=31.91 Aligned_cols=44 Identities=7% Similarity=0.227 Sum_probs=29.9
Q ss_pred CCCCcEEEEEEcCCCCCC-hhhH-HHHHH----HHHhC--CceEEEEEeCCC
Q 016296 104 KNQRQRIIVFAGSPVKYD-RKVM-EMIGK----KLKKN--SVAIDIVNFGED 147 (392)
Q Consensus 104 k~~~~RIVvFvgSp~~~d-~~~l-~~~ak----~LKkn--nI~VdiI~fG~e 147 (392)
..|-+||++|+|||.... ...+ ..+++ .|++. ++.|.+|.+++.
T Consensus 8 ~~~~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~ 59 (191)
T 3k1y_A 8 HSHMRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSEL 59 (191)
T ss_dssp -CCSEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGC
T ss_pred hhhhceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhC
Confidence 456678999999998752 2223 34455 55555 899999998754
No 78
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=50.54 E-value=13 Score=30.43 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=31.2
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
++|+|+.+|+...+..-...+++.|+..++.|.++.+...
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~ 40 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASV 40 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGGGC
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehhhC
Confidence 3678888998655566667778888888999999988654
No 79
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=50.06 E-value=17 Score=31.71 Aligned_cols=40 Identities=5% Similarity=0.067 Sum_probs=32.2
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
++|+|+.+|+...+..-...+++.+++.++.|.+|.+.+.
T Consensus 7 mkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~ 46 (211)
T 1ydg_A 7 VKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRET 46 (211)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred CeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecccc
Confidence 5789999999444555566778888889999999999875
No 80
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=49.92 E-value=17 Score=30.85 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=33.0
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
+|+|+.+|+...++.-...+++.|++.++.|.++.+....
T Consensus 2 kv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~ 41 (161)
T 3hly_A 2 SVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAVD 41 (161)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTTCC
T ss_pred EEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 5778889987667777788899999999999999987654
No 81
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=49.45 E-value=27 Score=32.78 Aligned_cols=39 Identities=10% Similarity=0.063 Sum_probs=30.6
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
+||+||.|+ .+ +.++-+.+|+.|+..|..|.|+-++...
T Consensus 86 ~~vlVlcG~-GN-NGGDGlv~AR~L~~~G~~V~v~~~~~~~ 124 (259)
T 3d3k_A 86 PTVALLCGP-HV-KGAQGISCGRHLANHDVQVILFLPNFVK 124 (259)
T ss_dssp CEEEEEECS-SH-HHHHHHHHHHHHHHTTCEEEEECCBCSS
T ss_pred CeEEEEECC-CC-CHHHHHHHHHHHHHCCCeEEEEEecCCC
Confidence 577776654 33 4778899999999999999999888543
No 82
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=48.96 E-value=65 Score=31.08 Aligned_cols=79 Identities=8% Similarity=0.012 Sum_probs=48.8
Q ss_pred CcEEEEEEcCCCCC-ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCChhhhhhhh
Q 016296 107 RQRIIVFAGSPVKY-DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGPNALSDVLI 185 (392)
Q Consensus 107 ~~RIVvFvgSp~~~-d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~lLsD~l~ 185 (392)
...+|+|+|..... ....+.++++++++.++++.|||-|... -.+.|+.+++..+ ++-++ ......+.+.+.+.
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~--~~~~l~~~~~~~~--~~v~~-~~g~~~~~~~~~~~ 365 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPV--LQEGFLAAAAEYP--GQVGV-QIGYHEAFSHRIMG 365 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHH--HHHHHHHHHHHST--TTEEE-EESCCHHHHHHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchH--HHHHHHHHHHhCC--CcEEE-eCCCCHHHHHHHHH
Confidence 44688899875433 4556788888888889999999988531 1357888877652 22221 22222334556665
Q ss_pred cCCcc
Q 016296 186 SSPVF 190 (392)
Q Consensus 186 sspi~ 190 (392)
.+.|+
T Consensus 366 ~adv~ 370 (485)
T 2qzs_A 366 GADVI 370 (485)
T ss_dssp HCSEE
T ss_pred hCCEE
Confidence 55553
No 83
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=48.07 E-value=43 Score=30.15 Aligned_cols=51 Identities=20% Similarity=0.238 Sum_probs=33.4
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
++.|+.|| +.|-....++++.|++.||..++--.|.. ...+.+..|++...
T Consensus 9 ~V~IimgS--~SD~~v~~~a~~~L~~~gi~~ev~V~SaH--R~p~~~~~~~~~a~ 59 (174)
T 3lp6_A 9 RVGVIMGS--DSDWPVMADAAAALAEFDIPAEVRVVSAH--RTPEAMFSYARGAA 59 (174)
T ss_dssp SEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCTT--TCHHHHHHHHHHHH
T ss_pred eEEEEECc--HHhHHHHHHHHHHHHHcCCCEEEEEECCC--CCHHHHHHHHHHHH
Confidence 46666676 33566677777788888887765555533 46777777776554
No 84
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=47.95 E-value=60 Score=29.42 Aligned_cols=62 Identities=11% Similarity=0.180 Sum_probs=44.3
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEec
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVP 174 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp 174 (392)
++.|+.|| +.|-....++++.|++.||..++--.|.. ...+.+..|.+.....+-.-||.+-
T Consensus 23 ~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH--R~p~~l~~~~~~a~~~g~~ViIa~A 84 (182)
T 1u11_A 23 VVGIIMGS--QSDWETMRHADALLTELEIPHETLIVSAH--RTPDRLADYARTAAERGLNVIIAGA 84 (182)
T ss_dssp SEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTT--TCHHHHHHHHHHTTTTTCCEEEEEE
T ss_pred EEEEEECc--HHHHHHHHHHHHHHHHcCCCeEEEEEccc--CCHHHHHHHHHHHHhCCCcEEEEec
Confidence 57778788 44677888999999999999886666644 5788999998765543333444443
No 85
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=47.50 E-value=31 Score=32.12 Aligned_cols=56 Identities=16% Similarity=0.126 Sum_probs=37.8
Q ss_pred HHHHHHHHhcccCCCCC-----CcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 90 GIQVAQLALKHRQNKNQ-----RQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 90 gL~vA~laLkhr~~k~~-----~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
|..+|...+++.+.... .+||+||.|. .+ +.++-+.+|+.|+..|..|.|+-++..
T Consensus 36 g~ava~~i~~~~~~~~~~~~~~~~~v~VlcG~-GN-NGGDGlv~AR~L~~~G~~V~v~~~~~~ 96 (246)
T 1jzt_A 36 GFSVAQAVCRQFPLRGKTETEKGKHVFVIAGP-GN-NGGDGLVCARHLKLFGYNPVVFYPKRS 96 (246)
T ss_dssp HHHHHHHHHHHSCCSSCCHHHHTCEEEEEECS-SH-HHHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred HHHHHHHHHHHccccccccccCCCeEEEEECC-CC-CHHHHHHHHHHHHHCCCeEEEEEcCCC
Confidence 45556555555332101 1577776654 33 477889999999999999999877763
No 86
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=45.53 E-value=1.1e+02 Score=27.13 Aligned_cols=113 Identities=4% Similarity=-0.003 Sum_probs=66.5
Q ss_pred CcHHHHHHHHHHHHHHhhh-cCCCCCcEEEEEecCCCceEEECCCCC-HHHHHHhhcc--c---c----cCCcCcHHHHH
Q 016296 23 PSRLRAQADAVSLICGAKT-QSNPENTVGILTMGGKGVRVLTTPTTD-LGKILACMHE--L---D----IGGEMNIAAGI 91 (392)
Q Consensus 23 PtRl~aq~dav~~fv~~k~-~~NPes~VGLvtmag~~~~vlvtlT~D-~~kil~~L~~--i---~----~~G~~sL~~gL 91 (392)
++-..+...+++.+++..- +.+-..+||++..+..... .+.+ ..-++.+|.. + + ..+..+...+.
T Consensus 108 ~D~~~~g~~a~~~l~~~~g~~~~~~~~i~~~~~~~~~~~----~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 183 (306)
T 8abp_A 108 LAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELD----TARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAF 183 (306)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEECTTSH----HHHHHHHHHHHHHHHHTCCGGGEEEEECSSSSHHHHH
T ss_pred cChhHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCh----HHHHHHHHHHHHHHhcCCCCcEEEeeccCCCChHHHH
Confidence 5788888999999986522 2222348888875543210 0000 1112333332 1 1 14667788898
Q ss_pred HHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCc---eEEEEEeCCC
Q 016296 92 QVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSV---AIDIVNFGED 147 (392)
Q Consensus 92 ~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI---~VdiI~fG~e 147 (392)
+.+...|...+ ...-++||..+ ..-..-+.+.|++.|+ .|.||||...
T Consensus 184 ~~~~~~l~~~~---~~~a~~i~~~n-----D~~A~g~~~al~~~g~~v~di~vvG~D~~ 234 (306)
T 8abp_A 184 DAANSMLVQHP---EVKHWLIVGMN-----DSTVLGGVRATEGQGFKAADIIGIGINGV 234 (306)
T ss_dssp HHHHHHHTTCT---TCSEEEEECSS-----HHHHHHHHHHHHHTTCCGGGEEEEEESSG
T ss_pred HHHHHHHHhCC---CCceEEEEeCC-----cHHHHHHHHHHHHcCCCCCceEEEEeCcH
Confidence 88888886532 22223444322 4456678888999999 5899999754
No 87
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=45.44 E-value=8.3 Score=25.58 Aligned_cols=21 Identities=10% Similarity=0.279 Sum_probs=18.7
Q ss_pred ChhhHHHHHHHHHhCCceEEE
Q 016296 121 DRKVMEMIGKKLKKNSVAIDI 141 (392)
Q Consensus 121 d~~~l~~~ak~LKknnI~Vdi 141 (392)
+|.++.++-+.+||.||+|..
T Consensus 13 tpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCCCB
T ss_pred CHHHHHHHHHHHHhccEEEEe
Confidence 688999999999999999853
No 88
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=45.21 E-value=28 Score=33.59 Aligned_cols=39 Identities=10% Similarity=0.063 Sum_probs=30.5
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
.||+||.|+ .+ +.++-+.+|+.|+..|+.|.|+-++...
T Consensus 133 ~~vlVlcG~-GN-NGGDGlv~AR~L~~~G~~V~V~~~~~~~ 171 (306)
T 3d3j_A 133 PTVALLCGP-HV-KGAQGISCGRHLANHDVQVILFLPNFVK 171 (306)
T ss_dssp CEEEEEECS-SH-HHHHHHHHHHHHHHTTCEEEEECCCCSS
T ss_pred CeEEEEECC-CC-CHHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 577766554 43 4778899999999999999999888543
No 89
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=45.12 E-value=22 Score=30.37 Aligned_cols=39 Identities=10% Similarity=0.113 Sum_probs=30.7
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHh-CCceEEEEEeCCC
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKK-NSVAIDIVNFGED 147 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKk-nnI~VdiI~fG~e 147 (392)
+|+|+.+|+...+..-...+++.+++ .++.|+++.+...
T Consensus 3 kilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~ 42 (198)
T 3b6i_A 3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPET 42 (198)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCC
T ss_pred eEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcccc
Confidence 68888899744455556677888888 8999999999876
No 90
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=44.35 E-value=90 Score=27.93 Aligned_cols=51 Identities=16% Similarity=0.242 Sum_probs=31.3
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
++.|+.|| +.|-....++++.|++.||.+++--.|.. ...+.+..|++...
T Consensus 8 ~V~IimgS--~SD~~v~~~a~~~l~~~gi~~ev~V~SaH--R~p~~~~~~~~~a~ 58 (169)
T 3trh_A 8 FVAILMGS--DSDLSTMETAFTELKSLGIPFEAHILSAH--RTPKETVEFVENAD 58 (169)
T ss_dssp EEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHHHHHHHHH
T ss_pred cEEEEECc--HHhHHHHHHHHHHHHHcCCCEEEEEEccc--CCHHHHHHHHHHHH
Confidence 45666666 33555666777777777777665444433 45667777766544
No 91
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=43.36 E-value=1.4e+02 Score=27.07 Aligned_cols=61 Identities=11% Similarity=0.132 Sum_probs=41.5
Q ss_pred EEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEec
Q 016296 110 IIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVP 174 (392)
Q Consensus 110 IVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp 174 (392)
+-|+.||. .|-..+.++++.|++.+|..++--.+.. .+.+++..|++.....+-.-+|.+-
T Consensus 25 V~IimGS~--SD~~v~~~a~~~L~~~gI~~e~~V~SAH--Rtp~~l~~~~~~a~~~g~~ViIa~A 85 (181)
T 4b4k_A 25 VGVIMGST--SDWETMKYACDILDELNIPYEKKVVSAH--RTPDYMFEYAETARERGLKVIIAGA 85 (181)
T ss_dssp EEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHHHHHHHTTTTTCCEEEEEE
T ss_pred EEEEECCH--hHHHHHHHHHHHHHHcCCCeeEEEEccc--cChHHHHHHHHHHHhcCceEEEEec
Confidence 55666773 3667788888888899988776666654 4788888888776544434444443
No 92
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=42.30 E-value=46 Score=31.06 Aligned_cols=53 Identities=13% Similarity=0.058 Sum_probs=37.0
Q ss_pred EEEEEEcCCC-CC-ChhhHHHHHHHHHh----CCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 109 RIIVFAGSPV-KY-DRKVMEMIGKKLKK----NSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 109 RIVvFvgSp~-~~-d~~~l~~~ak~LKk----nnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
.+|+|+|... .. ....+.++++++++ .++++.|||=|... -.+.|+.+++..+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~--~~~~l~~~~~~~~ 310 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE--LEGWARSLEEKHG 310 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHH--HHHHHHHHHHHCT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChh--HHHHHHHHHhhcC
Confidence 7889999876 43 56778889999988 56777777755432 1257777776553
No 93
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=41.50 E-value=43 Score=31.69 Aligned_cols=55 Identities=15% Similarity=0.088 Sum_probs=37.3
Q ss_pred HHHHHHHHhcccCC---CCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCC
Q 016296 90 GIQVAQLALKHRQN---KNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 90 gL~vA~laLkhr~~---k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~ 146 (392)
|..+|...+++.+. .++.+||+||.|. .+ +.+|-+.+|+.|+..|..|.|+-++.
T Consensus 59 G~ava~~i~~~~~~~~~~~~~~~VlVlcG~-GN-NGGDGlv~AR~L~~~G~~V~V~~~~~ 116 (265)
T 2o8n_A 59 GLSCATAIAKAYPPTSMSKSPPTVLVICGP-GN-NGGDGLVCARHLKLFGYQPTIYYPKR 116 (265)
T ss_dssp HHHHHHHHHHHSCGGGSSSSSCEEEEEECS-SH-HHHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred HHHHHHHHHHHcccccccCCCCeEEEEECC-CC-CHHHHHHHHHHHHHCCCcEEEEEeCC
Confidence 45555555554321 1123577777654 33 47788999999999999999987775
No 94
>2db7_A Hairy/enhancer-OF-split related with YRPW motif 1; structural genomics, unknown function, DNA binding protein, NPPSFA; 1.90A {Homo sapiens} SCOP: a.273.1.1
Probab=40.90 E-value=19 Score=27.23 Aligned_cols=26 Identities=31% Similarity=0.549 Sum_probs=21.6
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHhhh
Q 016296 360 VSSILTSLPGVDPNDPSVKDLIASLQ 385 (392)
Q Consensus 360 l~s~l~~lpgvdpn~~~i~~~~~~~~ 385 (392)
+...|..+|||||.||.=+.+|.-|.
T Consensus 31 V~rfLs~~eg~d~~d~~r~rLl~HL~ 56 (64)
T 2db7_A 31 VARYLSIIEGLDASDPLRVRLVSHLN 56 (64)
T ss_dssp HHHHHHHTSCCCTTCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcchHHHHHHHHHHH
Confidence 45678899999999998888887775
No 95
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=40.40 E-value=29 Score=31.72 Aligned_cols=51 Identities=10% Similarity=0.111 Sum_probs=35.0
Q ss_pred CcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 107 RQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 107 ~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
..++|+|+|... ..+.+..+++.+++-++++.+||-|.. .+.++++++..+
T Consensus 161 ~~~~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~----~~~l~~~~~~~~ 211 (342)
T 2iuy_A 161 KEDFLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWE----PEYFDEITRRYG 211 (342)
T ss_dssp CCSCEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCC----HHHHHHHHHHHT
T ss_pred CCCEEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCccc----HHHHHHHHHHhC
Confidence 345788999854 345555555555555899999887753 358888888765
No 96
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=40.23 E-value=31 Score=31.38 Aligned_cols=41 Identities=2% Similarity=0.151 Sum_probs=31.5
Q ss_pred CcEEEEEEcCCCCC--ChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 107 RQRIIVFAGSPVKY--DRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 107 ~~RIVvFvgSp~~~--d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
.++|+++.|||... +..-+..+++.|++.+..|.+|.+.+.
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL~~~ 43 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAM 43 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEETTTT
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEhhhc
Confidence 36899999999865 233345667888888999999999864
No 97
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=39.99 E-value=89 Score=28.83 Aligned_cols=49 Identities=24% Similarity=0.288 Sum_probs=31.8
Q ss_pred EEEEEEcCC-CCC-ChhhHHHHHHHHHhC--CceEEEEEeCCCCCCcHHHHHHHHHHH
Q 016296 109 RIIVFAGSP-VKY-DRKVMEMIGKKLKKN--SVAIDIVNFGEDDDGKPEKLEALLAAV 162 (392)
Q Consensus 109 RIVvFvgSp-~~~-d~~~l~~~ak~LKkn--nI~VdiI~fG~e~~~n~~~l~~~~~~v 162 (392)
.+|+|+|.. ... ....+.++++++++. ++.+.+||-|.. +.++.+++..
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-----~~l~~~~~~~ 261 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-----DELREQAGDL 261 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-----HHHHHHTGGG
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-----HHHHHHHHhc
Confidence 578899986 432 456677888888775 566666655432 4666666544
No 98
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=39.36 E-value=33 Score=31.75 Aligned_cols=69 Identities=17% Similarity=0.137 Sum_probs=44.0
Q ss_pred CCCcEEEEEEcCCCCC--ChhhHHHHHHHHHhCCceEEEEEeCCCCCC-----cHHHHHHHHHHHcCCCCceEEEecC
Q 016296 105 NQRQRIIVFAGSPVKY--DRKVMEMIGKKLKKNSVAIDIVNFGEDDDG-----KPEKLEALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 105 ~~~~RIVvFvgSp~~~--d~~~l~~~ak~LKknnI~VdiI~fG~e~~~-----n~~~l~~~~~~vn~~d~Sh~v~vp~ 175 (392)
...++|++|.||+... +..-+..+++.+++.++.|.+|.+.+-... ..+-++.+++.+..-| .+|.+-|
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~AD--~iI~~sP 107 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIWSE--GQVWVSP 107 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHCS--EEEEEEE
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHHCC--EEEEEeC
Confidence 3567899999999753 233344567788888999999998864211 1233566666665333 4554443
No 99
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=39.32 E-value=42 Score=29.75 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=28.5
Q ss_pred CCCCcEEEEEEcCCCCCC------hhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 104 KNQRQRIIVFAGSPVKYD------RKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 104 k~~~~RIVvFvgSp~~~d------~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
.+...+|+++.|||.-.. ..-+..+++.+++.+..|.+|-+....
T Consensus 9 ~~~~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~~v~~~dL~~~~ 59 (204)
T 2amj_A 9 HHGSSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDY 59 (204)
T ss_dssp ---CCEEEEEECCC------CHHHHHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred ccCCcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCCEEEEEeCCccc
Confidence 345678999999998321 122334566677779999999998754
No 100
>2lta_A De novo designed protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=45.38 E-value=6.3 Score=31.76 Aligned_cols=48 Identities=23% Similarity=0.432 Sum_probs=32.8
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
.+|||+++|. .-.+..+|++.|.+|..|+|.---... ..|+.-+..+.
T Consensus 3 skiiviissd----dttleelarkikdeglevyillkdkde----krleekiqklk 50 (110)
T 2lta_A 3 SKIIVIISSD----DTTLEELARKIKDEGLEVYILLKDKDE----KRLEEKIQKLK 50 (110)
Confidence 3577777774 445889999999999999987544332 25555444443
No 101
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=37.36 E-value=37 Score=29.19 Aligned_cols=40 Identities=10% Similarity=0.305 Sum_probs=30.4
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHh-CCceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKK-NSVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKk-nnI~VdiI~fG~e 147 (392)
++|+|+.+|+...+..-...+++.+++ .++.|+++.+...
T Consensus 5 ~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~ 45 (188)
T 2ark_A 5 GKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEA 45 (188)
T ss_dssp EEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTC
T ss_pred CEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC
Confidence 578888899654455556677888888 8999999988654
No 102
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=36.34 E-value=31 Score=29.99 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=29.2
Q ss_pred cEEEEEEcCCCCC--ChhhHHHHHHH-HHhCCceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVKY--DRKVMEMIGKK-LKKNSVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~~--d~~~l~~~ak~-LKknnI~VdiI~fG~e 147 (392)
++|++|.||+... +..-+..+++. ++..++.|.+|.+...
T Consensus 3 mkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~~~ 45 (197)
T 2vzf_A 3 YSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHVIDL 45 (197)
T ss_dssp EEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEGGGS
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 3689999998632 33444556677 7888999999998764
No 103
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=35.89 E-value=36 Score=32.39 Aligned_cols=68 Identities=16% Similarity=0.091 Sum_probs=45.0
Q ss_pred CCcEEEEEEcCCCCC--ChhhHHHHHHHHHhCCceEEEEEeCCCCCC------cHHHHHHHHHHHcCCCCceEEEecC
Q 016296 106 QRQRIIVFAGSPVKY--DRKVMEMIGKKLKKNSVAIDIVNFGEDDDG------KPEKLEALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~--d~~~l~~~ak~LKknnI~VdiI~fG~e~~~------n~~~l~~~~~~vn~~d~Sh~v~vp~ 175 (392)
+.++|++|.||+... +..-+..+++.+++.++.|.+|.+.+.... ..+..+.+.+.+..-| .+|.+-|
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~AD--giV~aSP 132 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSE--GQVWCSP 132 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCS--EEEEEEE
T ss_pred CCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCC--eEEEEcC
Confidence 567899999999753 233345577888888999999999874311 1244666777776433 4555443
No 104
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=35.74 E-value=76 Score=25.53 Aligned_cols=54 Identities=13% Similarity=0.324 Sum_probs=38.0
Q ss_pred CCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 106 QRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
..+.+|+|+.+. ...+....-..+||++|.-|+.---+.. +=+...+.|.+...
T Consensus 50 ngkplvvfvnga---sqndvnefqneakkegvsydvlkstdpe-eltqrvreflktag 103 (112)
T 2lnd_A 50 NGKPLVVFVNGA---SQNDVNEFQNEAKKEGVSYDVLKSTDPE-ELTQRVREFLKTAG 103 (112)
T ss_dssp CCSCEEEEECSC---CHHHHHHHHHHHHHHTCEEEEEECCCHH-HHHHHHHHHHHHTT
T ss_pred cCCeEEEEecCc---ccccHHHHHHHHHhcCcchhhhccCCHH-HHHHHHHHHHHhcc
Confidence 556689998664 3556777777889999999988655544 44566777776553
No 105
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=34.13 E-value=36 Score=29.18 Aligned_cols=39 Identities=18% Similarity=0.179 Sum_probs=30.0
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
++|+++.+| ...+..-+..+++.+++.++.|.+|.+.+.
T Consensus 5 mkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~~ 43 (199)
T 2zki_A 5 PNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRET 43 (199)
T ss_dssp CEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred cEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhHh
Confidence 578888899 333455556778888889999999998765
No 106
>3qbr_A SJA, sjchgc06286 protein; helical bundle, BCL-2-like fold, apoptosis; HET: NHE; 2.60A {Schistosoma japonicum}
Probab=33.63 E-value=14 Score=33.55 Aligned_cols=30 Identities=23% Similarity=0.495 Sum_probs=25.8
Q ss_pred CChHHHHHHHhcCCCCC-CCCHHHHHHHHhhh
Q 016296 355 GDQSFVSSILTSLPGVD-PNDPSVKDLIASLQ 385 (392)
Q Consensus 355 ~d~~fl~s~l~~lpgvd-pn~~~i~~~~~~~~ 385 (392)
+|.++|..||.+ |||| |+||..|+++..|.
T Consensus 36 ~~~~~~~~~~~~-~~~~l~~dp~~~~v~~~L~ 66 (179)
T 3qbr_A 36 QDTDYLTDLLDN-TNIDLTCVPNGQEIIHSLL 66 (179)
T ss_dssp HHHHHHHHHHHH-HTCCCCCCTTHHHHHHHHH
T ss_pred ccchHHHHHHcC-CCCCCCCCCChHHHHHHHH
Confidence 478899999876 8999 89999999988875
No 107
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=33.00 E-value=48 Score=27.19 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=28.2
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEE
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVN 143 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~ 143 (392)
+|+|+.+|....++.-...+++.|...++.|.++.
T Consensus 3 ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 3 DITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp SEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 46777788777778888899999999898888764
No 108
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=32.16 E-value=26 Score=28.35 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=30.2
Q ss_pred EEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 110 IIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 110 IVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
|+|+.+|....++.-...+++.|++.++.|+++.+.+..
T Consensus 1 i~I~Y~S~tGnT~~iA~~ia~~l~~~g~~v~~~~~~~~~ 39 (138)
T 5nul_A 1 MKIVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVN 39 (138)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHHTTCCCEEEEGGGCC
T ss_pred CEEEEECCCchHHHHHHHHHHHHHHCCCeEEEEEhhhCC
Confidence 456667865556666778899999999999999987654
No 109
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=32.00 E-value=29 Score=30.79 Aligned_cols=41 Identities=10% Similarity=0.155 Sum_probs=32.8
Q ss_pred CCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCC
Q 016296 106 QRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~ 146 (392)
..++|+|+.+|....+++-...+++.|+..++.|+++.+..
T Consensus 20 ~~~kv~IvY~S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~~ 60 (191)
T 1bvy_F 20 HNTPLLVLYGSNMGTAEGTARDLADIAMSKGFAPQVATLDS 60 (191)
T ss_dssp -CCCEEEEEECSSSHHHHHHHHHHHHHHTTTCCCEEEEGGG
T ss_pred CCCeEEEEEECCChHHHHHHHHHHHHHHhCCCceEEeeHHH
Confidence 45678888899766677777888999998999999988765
No 110
>4fid_A G protein alpha subunit; RAS-like domain, all-helical domain, GTP binding, nucleotide signaling protein, transducer, lipoprotein; HET: MLY MSE GDP; 2.62A {Entamoeba histolytica}
Probab=31.71 E-value=3.6e+02 Score=26.05 Aligned_cols=82 Identities=20% Similarity=0.142 Sum_probs=51.4
Q ss_pred ceEEEEEeCCcc--ccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHH--HHH-Hhhcc
Q 016296 4 EATMICIDNSEW--MRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLG--KIL-ACMHE 78 (392)
Q Consensus 4 Ea~~IvIDnSes--MrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~--kil-~~L~~ 78 (392)
-++++|+|.|+| +.-.|-..+||...+.....+++... ...+-+|.+++|. |.- ++. .-|..
T Consensus 186 ~~iIfV~diS~ydq~l~e~~~~nr~~es~~~~~~i~~~~~----~~~~piiLv~NK~---------DL~~eki~~~~l~~ 252 (340)
T 4fid_A 186 DCAIFVTSLAEYDMKLYEDGNTSRLTESIAVFKDIMTNEF----LKGAVKLIFLNKM---------DLFEEKLTKVPLNT 252 (340)
T ss_dssp SEEEEEEEGGGTTCBCC--CCSBHHHHHHHHHHHHHHCGG----GTTSEEEEEEECH---------HHHHHHHHHSCGGG
T ss_pred CEEEEEEECCccccccccccccchHHHHHHHHHHHhhhhc----cCCCeEEEEEECc---------hhhhhhcCcchHHH
Confidence 478999999976 33455578999999988888887532 1346678888774 322 111 11222
Q ss_pred c--ccCCcCcHHHHHHHHHHHh
Q 016296 79 L--DIGGEMNIAAGIQVAQLAL 98 (392)
Q Consensus 79 i--~~~G~~sL~~gL~vA~laL 98 (392)
. .-.|..+...|.+-...-+
T Consensus 253 ~fp~y~g~~~~e~a~~~i~~~f 274 (340)
T 4fid_A 253 IFPEYTGGDNAVMGAQYIQQLF 274 (340)
T ss_dssp TCTTCCCTTCHHHHHHHHHHHH
T ss_pred hhhhhcCCCCHHHHHHHHHHhc
Confidence 1 2245567888887776666
No 111
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=31.57 E-value=1.6e+02 Score=24.02 Aligned_cols=67 Identities=16% Similarity=0.228 Sum_probs=39.8
Q ss_pred EEEEcCCCCCC------hhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCCh
Q 016296 111 IVFAGSPVKYD------RKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGPN 178 (392)
Q Consensus 111 VvFvgSp~~~d------~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~ 178 (392)
|+|+|..++.. ..-...+.+.|++.+..+.++++|-....-...+..|-..+... .-.+|+|--|.+
T Consensus 5 i~~~GDSit~G~g~~~~~~~~~~l~~~l~~~~~~~~v~n~g~~G~~~~~~~~~~~~~~~~~-~pd~vvi~~G~N 77 (185)
T 3hp4_A 5 ILILGDXLSAAYGLQQEEGWVKLLQDKYDAEQSDIVLINASISGETSGGALRRLDALLEQY-EPTHVLIELGAN 77 (185)
T ss_dssp EEEEECTTTTTTTSCGGGSHHHHHHHHHHHTTCCEEEEECCCTTCCHHHHHHHHHHHHHHH-CCSEEEEECCHH
T ss_pred EEEECCcccccCCCCCcccHHHHHHHHHHhcCCcEEEEECCcCCccHHHHHHHHHHHHhhc-CCCEEEEEeecc
Confidence 55566656542 23356778889988999999999887632334555554433211 224555555543
No 112
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=31.57 E-value=1.3e+02 Score=24.08 Aligned_cols=41 Identities=7% Similarity=0.140 Sum_probs=29.3
Q ss_pred cEEEEEEcCCCCC----ChhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 108 QRIIVFAGSPVKY----DRKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 108 ~RIVvFvgSp~~~----d~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
.+.||+=.+.++. .-+-+..+.+++++.|+.+.+++.....
T Consensus 48 ~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v 92 (130)
T 2kln_A 48 VEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDL 92 (130)
T ss_dssp CEEEEEECSCCSSSBCSTTTHHHHHHHHHHTTTEEEEEECCSSHH
T ss_pred ceEEEEECCCCChhhHHHHHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 3445555555542 3457889999999999999999886543
No 113
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=31.29 E-value=64 Score=27.95 Aligned_cols=52 Identities=12% Similarity=0.040 Sum_probs=36.4
Q ss_pred EEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHH
Q 016296 109 RIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAA 161 (392)
Q Consensus 109 RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~ 161 (392)
+-|.|.|+.-...++.+.++++.+++.++.|.+..=|... ...+.++.|.+.
T Consensus 71 ~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~-~~~~~~~~l~~~ 122 (245)
T 3c8f_A 71 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVR-RYDPVIDELLEV 122 (245)
T ss_dssp CEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCC-CCCHHHHHHHHT
T ss_pred CeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcC-cCHHHHHHHHHh
Confidence 3466777654455655789999999999988887767542 144678887764
No 114
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=31.15 E-value=1.3e+02 Score=29.52 Aligned_cols=113 Identities=11% Similarity=0.060 Sum_probs=57.5
Q ss_pred EEEEeCCccccCCCCCCc----HHHHHHHHHHHHHHhhhcCCCCCcEE--E--EEecCCCceEE--ECCCCCHHHHHHhh
Q 016296 7 MICIDNSEWMRNGDYSPS----RLRAQADAVSLICGAKTQSNPENTVG--I--LTMGGKGVRVL--TTPTTDLGKILACM 76 (392)
Q Consensus 7 ~IvIDnSesMrngD~~Pt----Rl~aq~dav~~fv~~k~~~NPes~VG--L--vtmag~~~~vl--vtlT~D~~kil~~L 76 (392)
+|+||.. |+ ||-..-+.+..+++.++...-....| + -.+-+.....+ +++.. ..+...|
T Consensus 127 ~VIvDtp---------Ptg~tLrlL~lP~~l~~~l~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~--d~~~~~l 195 (374)
T 3igf_A 127 TIVYDGT---------GDAFTLRMLGLPESLSWYVRRFRQLFVNSDLGKTIAESPLIQPLISSFFNVNWTA--DNFAQPT 195 (374)
T ss_dssp EEEEECC---------CSHHHHHHHTHHHHHHHHHHHTTSCC-------------------------------------C
T ss_pred EEEEeCC---------CChHHhhhhhhhHHHHHHHHHHHHHHhhhccccccccchhhhhhhhhhccCCCch--HHHHHHH
Confidence 6777776 76 88888888999999876554443222 1 01101000000 00000 1111111
Q ss_pred cccccCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEE
Q 016296 77 HELDIGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVN 143 (392)
Q Consensus 77 ~~i~~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~ 143 (392)
. .+..-+.-+...|+. ..+.-+++|..|-...-.+...+.+.|++.||+|.-|-
T Consensus 196 ~--------~~~~~~~~~~~~L~d-----p~~t~~vlVt~pe~~sl~ea~r~~~~L~~~gi~v~gvV 249 (374)
T 3igf_A 196 N--------QVNNFLDKGKEALAD-----PKRVAAFLVTTADPLEVVSVRYLWGSAQQIGLTIGGVI 249 (374)
T ss_dssp H--------HHHHHHHHHHHHHHC-----TTTEEEEEEECSCHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred H--------HHHHHHHHHHHHHhc-----cCCeEEEEEECCCccHHHHHHHHHHHHHHcCCCccEEE
Confidence 1 233445555566654 22234556677655566788899999999999998543
No 115
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=31.05 E-value=92 Score=28.41 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=41.2
Q ss_pred CcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChh----hH------------HHHHHHHHhCCceEEEEEeCCCC
Q 016296 85 MNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRK----VM------------EMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 85 ~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~----~l------------~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
+++...+.+.+.++++.. +....| ||+++|.....+. .. ..+++.+++.||+|..|.-|.-.
T Consensus 123 vN~~g~~~l~~~~~~~m~-~~~~g~-iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v 200 (285)
T 3sc4_A 123 IQVRGTYAVSQSCIPHMK-GRDNPH-ILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTV 200 (285)
T ss_dssp HHHHHHHHHHHHHGGGTT-TSSSCE-EEECCCCCCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCB
T ss_pred HHhHHHHHHHHHHHHHHH-HcCCcE-EEEECChhhccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcc
Confidence 456667777888887752 223344 5566664432221 11 23456667789999999999533
Q ss_pred CCcHHHHHHH
Q 016296 149 DGKPEKLEAL 158 (392)
Q Consensus 149 ~~n~~~l~~~ 158 (392)
.++..+.+
T Consensus 201 --~t~~~~~~ 208 (285)
T 3sc4_A 201 --ATAAVQNL 208 (285)
T ss_dssp --CCHHHHHH
T ss_pred --ccHHHHhh
Confidence 13455444
No 116
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=30.97 E-value=47 Score=26.32 Aligned_cols=38 Identities=13% Similarity=0.167 Sum_probs=28.0
Q ss_pred EEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 110 IIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 110 IVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
|+|+.+|....+..-...+++.++..++.|.++.+.+.
T Consensus 2 i~iiy~S~tGnT~~~a~~i~~~l~~~g~~v~~~~~~~~ 39 (137)
T 2fz5_A 2 VEIVYWSGTGNTEAMANEIEAAVKAAGADVESVRFEDT 39 (137)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTTCCEEEEETTSC
T ss_pred EEEEEECCCChHHHHHHHHHHHHHhCCCeEEEEEcccC
Confidence 45666886544555666778888888999999987653
No 117
>1cip_A Protein (guanine nucleotide-binding protein alpha-1 subunit); GTPase, hydrolase; HET: GNP; 1.50A {Rattus norvegicus} SCOP: a.66.1.1 c.37.1.8 PDB: 1agr_A* 1bof_A* 1gdd_A* 1gfi_A* 1gia_A* 1gp2_A* 3ffa_A* 3ffb_A* 1gg2_A* 1git_A* 1svs_A* 1svk_A* 2zjz_A* 2zjy_A* 3ums_A* 2pz2_A* 2pz3_A* 1as0_A* 1as2_A* 1as3_A* ...
Probab=30.53 E-value=3.3e+02 Score=26.25 Aligned_cols=101 Identities=19% Similarity=0.230 Sum_probs=58.6
Q ss_pred ceEEEEEeCCcc--ccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCCceEEECCCCCHH--HHH-Hhhcc
Q 016296 4 EATMICIDNSEW--MRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKGVRVLTTPTTDLG--KIL-ACMHE 78 (392)
Q Consensus 4 Ea~~IvIDnSes--MrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~~~vlvtlT~D~~--kil-~~L~~ 78 (392)
-++++|+|.|++ +...|=.++||.........+++... ...+-||.+++|. |.- ++. .-|..
T Consensus 218 ~~iIfV~dls~~d~~l~ed~~~nr~~e~~~~~~~i~~~~~----~~~~piiLv~NK~---------DL~~~ki~~~~l~~ 284 (353)
T 1cip_A 218 TAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKW----FTDTSIILFLNKK---------DLFEEKIKKSPLTI 284 (353)
T ss_dssp SEEEEEEEGGGGGCEETTEEEEEHHHHHHHHHHHHHTCGG----GTTSEEEEEEECH---------HHHHHHHTTSCGGG
T ss_pred CEEEEEEECccccccccccchhhhHHHHHHHHHHHHcCcc----ccCCcEEEEEECc---------Cchhhhccccchhh
Confidence 479999999985 44556568999999988888887422 1236678888874 321 110 01111
Q ss_pred c--ccCCcCcHHHHHHHHHHHhcccCCCC-CCcEEEEEEcCCC
Q 016296 79 L--DIGGEMNIAAGIQVAQLALKHRQNKN-QRQRIIVFAGSPV 118 (392)
Q Consensus 79 i--~~~G~~sL~~gL~vA~laLkhr~~k~-~~~RIVvFvgSp~ 118 (392)
. .-.|..+...+...+..-++.. ++. ..+.+-+|..|-.
T Consensus 285 ~fp~~~g~~~~~e~~~~~~~~f~~l-~~~~~~~~~~~~etSA~ 326 (353)
T 1cip_A 285 CYPEYAGSNTYEEAAAYIQCQFEDL-NKRKDTKEIYTHFTCAT 326 (353)
T ss_dssp TCTTCCSCSCHHHHHHHHHHHHHTT-CSCTTTCCEEEEECCTT
T ss_pred cccccCCCCCHHHHHHHHHHHHHHh-hcccCCCceEEEEEECc
Confidence 1 1135567777777776554432 221 1233445555543
No 118
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=30.17 E-value=45 Score=28.38 Aligned_cols=40 Identities=8% Similarity=0.252 Sum_probs=28.8
Q ss_pred cEEEEEEcCCCC--C-ChhhHHHHHHHHHhCC--ceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVK--Y-DRKVMEMIGKKLKKNS--VAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~--~-d~~~l~~~ak~LKknn--I~VdiI~fG~e 147 (392)
++|+++.|||.. . +..-+..+++.+++.+ +.|.+|.+...
T Consensus 2 mkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~ 46 (201)
T 1t5b_A 2 SKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAAN 46 (201)
T ss_dssp CEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTS
T ss_pred CeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCC
Confidence 368999999973 3 3333445677788765 89999998764
No 119
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=30.05 E-value=44 Score=30.72 Aligned_cols=59 Identities=8% Similarity=0.154 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 87 IAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 87 L~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
+..|+..+...++.. ...+++|+||.||-....+.-...+++.+ ..++.+.++.+.+-.
T Consensus 22 ~~~av~~~~~l~~~~--~~~~~kv~IlYgS~tGnte~~A~~La~~l-~~g~~v~v~~l~~~~ 80 (219)
T 3hr4_A 22 LVKAVLFACMLMRKT--MASRVRVTILFATETGKSEALAWDLGALF-SCAFNPKVVCMDKYR 80 (219)
T ss_dssp HHHHHHHHHHHHHHH--HHTSCEEEEEEECSSSHHHHHHHHHHHHH-TTTSEEEEEEGGGCC
T ss_pred HHHHHHHHHHHHHHH--HhcCCcEEEEEECCchHHHHHHHHHHHHH-HcCCCeEEEEcccCC
Confidence 344555555444332 33667799999996655666667777777 578999999887643
No 120
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=29.36 E-value=66 Score=33.06 Aligned_cols=55 Identities=16% Similarity=0.173 Sum_probs=39.1
Q ss_pred HHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 90 GIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 90 gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
|..+|...+++.+ ....+||+||.|+ .+ +.++-+.+|+.|+..|..|.|+-++..
T Consensus 36 g~a~a~~i~~~~~-~~~~~~v~VlcG~-GN-NGGDGlv~AR~L~~~G~~V~v~~~~~~ 90 (502)
T 3rss_A 36 GISVVLAMEEELG-NLSDYRFLVLCGG-GN-NGGDGFVVARNLLGVVKDVLVVFLGKK 90 (502)
T ss_dssp HHHHHHHHHHHHS-CCTTCEEEEEECS-SH-HHHHHHHHHHHHTTTSSEEEEEECCSS
T ss_pred HHHHHHHHHHhcC-ccCCCEEEEEECC-CC-CHHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 4555555555432 1245677777555 33 478889999999999999999999876
No 121
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=29.30 E-value=1.1e+02 Score=24.29 Aligned_cols=25 Identities=16% Similarity=0.311 Sum_probs=21.9
Q ss_pred ChhhHHHHHHHHHhCCceEEEEEeC
Q 016296 121 DRKVMEMIGKKLKKNSVAIDIVNFG 145 (392)
Q Consensus 121 d~~~l~~~ak~LKknnI~VdiI~fG 145 (392)
++..+.++.+.|++.+|.|.+|++|
T Consensus 74 ~~~~~~~ai~~L~~~~v~vEvlg~~ 98 (98)
T 3ced_A 74 SSVDFGKFEKELIERQVKMEVLRHG 98 (98)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEecCC
Confidence 3567889999999999999999876
No 122
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=28.28 E-value=25 Score=27.00 Aligned_cols=52 Identities=17% Similarity=0.233 Sum_probs=29.4
Q ss_pred CChHHHHHHHHH-----cccCCCCCCCCCcchhhhccCChHHHHHHHhcCCCCCCCCHHHHHHHHhhhc
Q 016296 323 TDEDKELALALQ-----MSMQDDTKDPSNQSDMSKVLGDQSFVSSILTSLPGVDPNDPSVKDLIASLQG 386 (392)
Q Consensus 323 ~~ee~~ia~A~~-----ms~~~~~~~~~~~~~~~~~~~d~~fl~s~l~~lpgvdpn~~~i~~~~~~~~~ 386 (392)
.+++|.++++++ ..|+++.-. .-..++++||..++..+. ||.|++.+..|..
T Consensus 7 e~~ee~~~~~m~dPEi~~im~DP~~~----~~lq~~~~NP~~~~k~~~--------nP~v~~~i~kl~~ 63 (71)
T 2llw_A 7 ETPEETYQRAMKDPEVAAIMQDPVMQ----SILQQAQQNPAALQEHMK--------NPEVFKKIQTLIA 63 (71)
T ss_dssp SCHHHHHHHHHHSHHHHHHHTCTHHH----HHHHHHHHCHHHHHHHHH--------SHHHHHHHHHHHH
T ss_pred CCcHHHHHHHhcCHHHHHHhCCHHHH----HHHHHHHHCHHHHHHHHh--------CHHHHHHHHHHHH
Confidence 355666666664 223332111 234456667777777665 5888888777643
No 123
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=27.55 E-value=82 Score=28.58 Aligned_cols=38 Identities=18% Similarity=0.150 Sum_probs=23.1
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~ 146 (392)
+.|+|++.||... -..-..+.+.++.-+..|.++..|-
T Consensus 69 k~I~l~INSPGGs-v~a~~~I~~~i~~~~~pV~t~v~g~ 106 (215)
T 2f6i_A 69 NDIKIYINSPGGS-INEGLAILDIFNYIKSDIQTISFGL 106 (215)
T ss_dssp SCEEEEEEECCBC-HHHHHHHHHHHHHSSSCEEEEEEEE
T ss_pred CcEEEEEECCCCC-HHHHHHHHHHHHhcCCCEEEEEeeE
Confidence 7799999999875 2233344444444445555555554
No 124
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=27.49 E-value=39 Score=31.57 Aligned_cols=50 Identities=16% Similarity=0.144 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEe
Q 016296 89 AGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNF 144 (392)
Q Consensus 89 ~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~f 144 (392)
+|..++-..+.. ..+||+ |+..|...+---+..+|+.|++.|-.|.+++-
T Consensus 9 ~~~~~g~~~~~~-----~~MRIL-~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~ 58 (400)
T 4amg_A 9 SGVDLGTENLYF-----QSMRAL-FITSPGLSHILPTVPLAQALRALGHEVRYATG 58 (400)
T ss_dssp -----------------CCCEEE-EECCSSHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CCccCCcccCCC-----CCCeEE-EECCCchhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 445555444433 457866 56666544444467999999999999988873
No 125
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=27.35 E-value=1.5e+02 Score=24.44 Aligned_cols=52 Identities=15% Similarity=0.078 Sum_probs=31.1
Q ss_pred EEEEEEcCCC-CC-ChhhHHHHHHHHH--hC--CceEEEEEeCCCCCCcHHHHHHHHHHH
Q 016296 109 RIIVFAGSPV-KY-DRKVMEMIGKKLK--KN--SVAIDIVNFGEDDDGKPEKLEALLAAV 162 (392)
Q Consensus 109 RIVvFvgSp~-~~-d~~~l~~~ak~LK--kn--nI~VdiI~fG~e~~~n~~~l~~~~~~v 162 (392)
.+|+|+|... .. ....+.+++++++ +. ++++.+||-|... ..+.++.+++..
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~--~~~~l~~~~~~~ 94 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE--LEGWARSLEEKH 94 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHH--HHHHHHHHHHHC
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChH--HHHHHHHHHHhc
Confidence 4777888865 32 4556777788875 43 4556665544310 235677776654
No 126
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=27.29 E-value=60 Score=28.38 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=29.7
Q ss_pred cEEEEEEcCCCCC---ChhhHHHHHHHHHhC--CceEEEEEeCCC
Q 016296 108 QRIIVFAGSPVKY---DRKVMEMIGKKLKKN--SVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~~~---d~~~l~~~ak~LKkn--nI~VdiI~fG~e 147 (392)
++|+++.|||... +..-+..+++.+++. +..|.+|-+.+.
T Consensus 2 mkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~~~ 46 (212)
T 3r6w_A 2 SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRV 46 (212)
T ss_dssp CCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESSSS
T ss_pred CEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 3688999999863 233345667888877 899999998765
No 127
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=26.51 E-value=1.2e+02 Score=25.78 Aligned_cols=24 Identities=0% Similarity=0.187 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHhC-CceEEEEEeCC
Q 016296 123 KVMEMIGKKLKKN-SVAIDIVNFGE 146 (392)
Q Consensus 123 ~~l~~~ak~LKkn-nI~VdiI~fG~ 146 (392)
++..-++++|+.. |++|.++|+-.
T Consensus 119 ~DF~plv~~lr~~~G~~V~v~g~~~ 143 (165)
T 2qip_A 119 GDFSLLVERIQQRYNKKVTVYGVPR 143 (165)
T ss_dssp GGGHHHHHHHHHHHCCEEEEEECGG
T ss_pred hhHHHHHHHHHHHcCcEEEEEeCCC
Confidence 4788899999995 99998888753
No 128
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=26.49 E-value=1.2e+02 Score=27.26 Aligned_cols=60 Identities=18% Similarity=0.184 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChh-----------------hHHHHHHHHHhCCceEEEEEeCC
Q 016296 85 MNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRK-----------------VMEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 85 ~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~-----------------~l~~~ak~LKknnI~VdiI~fG~ 146 (392)
+++...+.+.+.++++.. +....| ||+++|.....+. -...+++.+++.||+|..|.-|.
T Consensus 120 vN~~g~~~l~~~~~~~m~-~~~~g~-iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~ 196 (274)
T 3e03_A 120 VNARGSFVCAQACLPHLL-QAPNPH-ILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRT 196 (274)
T ss_dssp HTHHHHHHHHHHHHHHHT-TSSSCE-EEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSB
T ss_pred HhhHhHHHHHHHHHHHHH-hcCCce-EEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCc
Confidence 466667777777776642 223344 5566775544331 11345677788899999999994
No 129
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=26.11 E-value=2e+02 Score=25.35 Aligned_cols=49 Identities=24% Similarity=0.314 Sum_probs=36.9
Q ss_pred EEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHH
Q 016296 110 IIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAV 162 (392)
Q Consensus 110 IVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~v 162 (392)
|.|+.|| +.|-....++++.|++.||..++--.|.. ...+.+..|.+..
T Consensus 2 V~Iimgs--~SD~~v~~~a~~~l~~~gi~~dv~V~saH--R~p~~~~~~~~~a 50 (157)
T 2ywx_A 2 ICIIMGS--ESDLKIAEKAVNILKEFGVEFEVRVASAH--RTPELVEEIVKNS 50 (157)
T ss_dssp EEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTT--TCHHHHHHHHHHC
T ss_pred EEEEEcc--HHHHHHHHHHHHHHHHcCCCeEEEEEccc--CCHHHHHHHHHhc
Confidence 5566677 44677788999999999999777666654 4788888888744
No 130
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=25.99 E-value=84 Score=28.31 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=36.0
Q ss_pred cccCCcCcHHHHHHHHH--HHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 79 LDIGGEMNIAAGIQVAQ--LALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 79 i~~~G~~sL~~gL~vA~--laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
+.++|.++-..+=.+.. +.|.. ....+.|++++.||... ...-..+...++..+..|.++..|-.
T Consensus 33 I~l~g~I~~~~a~~i~~~L~~l~~---~~~~~~I~l~INSpGG~-v~~~~~I~~~i~~~~~~v~t~~~G~A 99 (201)
T 3p2l_A 33 VFLNGEVNDHSANLVIAQLLFLES---EDPDKDIYFYINSPGGM-VTAGMGVYDTMQFIKPDVSTICIGLA 99 (201)
T ss_dssp EEEESCBCHHHHHHHHHHHHHHHH---HCSSSCEEEEEEECCBC-HHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred EEEcCEECHHHHHHHHHHHHHHHh---cCCCCCEEEEEECCCCC-HHHHHHHHHHHHHhCCCeEEEEcCEe
Confidence 46677666544444333 33333 22456799999999865 33334444444554555566555543
No 131
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=25.58 E-value=1.2e+02 Score=27.00 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=22.7
Q ss_pred CCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeC
Q 016296 106 QRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFG 145 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG 145 (392)
..+-|++++.||... ...-..+.+.++..+++|.++..|
T Consensus 56 ~~k~I~l~InSPGG~-v~a~~~I~~~i~~~~~pV~~~v~g 94 (208)
T 2cby_A 56 ASKDISLYINSPGGS-ISAGMAIYDTMVLAPCDIATYAMG 94 (208)
T ss_dssp SSSCEEEEEEECCBC-HHHHHHHHHHHHHCSSCEEEEEEE
T ss_pred CCCCEEEEEECCCCC-HHHHHHHHHHHHhcCCCEEEEECc
Confidence 456699999999875 333344444444444455544444
No 132
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=25.09 E-value=99 Score=27.90 Aligned_cols=66 Identities=11% Similarity=0.156 Sum_probs=35.8
Q ss_pred cccCCcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCC
Q 016296 79 LDIGGEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 79 i~~~G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~ 146 (392)
|.++|.++-..+=.+....+... .....+.|++++.||... ...-..+...++..+..|.++..|-
T Consensus 30 I~l~g~I~~~~a~~i~~~L~~l~-~~~~~~~I~l~InSPGG~-v~~~~~I~~~i~~~~~~V~t~~~G~ 95 (203)
T 3qwd_A 30 IMLGSQIDDNVANSIVSQLLFLQ-AQDSEKDIYLYINSPGGS-VTAGFAIYDTIQHIKPDVQTICIGM 95 (203)
T ss_dssp EEECSCBCHHHHHHHHHHHHHHH-HHCSSSCEEEEEEECCBC-HHHHHHHHHHHHHSSSCEEEEEEEE
T ss_pred EEEcCEECHHHHHHHHHHHHHHH-hcCCCCCEEEEEeCCCCC-HHHHHHHHHHHHHhcCCcEEEEeee
Confidence 46677766555444443332221 122456799999999875 3333444444455455555555554
No 133
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=24.64 E-value=85 Score=26.65 Aligned_cols=39 Identities=10% Similarity=0.290 Sum_probs=27.4
Q ss_pred cEEEEEEcCCCCC--ChhhHHHHHHHHHhC------CceEEEEEeCC
Q 016296 108 QRIIVFAGSPVKY--DRKVMEMIGKKLKKN------SVAIDIVNFGE 146 (392)
Q Consensus 108 ~RIVvFvgSp~~~--d~~~l~~~ak~LKkn------nI~VdiI~fG~ 146 (392)
++|+++.||+... +..-+..+++.+++. ++.|.+|.+.+
T Consensus 1 Mkilii~gS~r~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~ 47 (191)
T 1t0i_A 1 MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQ 47 (191)
T ss_dssp CEEEEEECCCCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHH
T ss_pred CeEEEEeCCCCCCCchHHHHHHHHHHHHHhhccCCCCceEEEEehhh
Confidence 3689999999743 333344556677765 68999998765
No 134
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=24.60 E-value=62 Score=29.53 Aligned_cols=36 Identities=14% Similarity=-0.078 Sum_probs=26.3
Q ss_pred CcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEE
Q 016296 107 RQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVN 143 (392)
Q Consensus 107 ~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~ 143 (392)
.+||++-|++.+ .--+....+++.|++.|+.|.+|-
T Consensus 5 ~k~IllgiTGsi-aayk~~~~ll~~L~~~g~eV~vv~ 40 (207)
T 3mcu_A 5 GKRIGFGFTGSH-CTYEEVMPHLEKLIAEGAEVRPVV 40 (207)
T ss_dssp TCEEEEEECSCG-GGGTTSHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEEEChH-HHHHHHHHHHHHHHhCCCEEEEEE
Confidence 467888776644 223346788999999999999875
No 135
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=24.39 E-value=61 Score=28.03 Aligned_cols=38 Identities=13% Similarity=0.270 Sum_probs=27.8
Q ss_pred cEEEEEEcCCCC---CChhh-HHHHHHHHHhCC--ceEEEEEeC
Q 016296 108 QRIIVFAGSPVK---YDRKV-MEMIGKKLKKNS--VAIDIVNFG 145 (392)
Q Consensus 108 ~RIVvFvgSp~~---~d~~~-l~~~ak~LKknn--I~VdiI~fG 145 (392)
++|+++.|||.. ..... +..+++.+++.+ +.|.+|.+.
T Consensus 2 ~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~ 45 (208)
T 2hpv_A 2 SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVY 45 (208)
T ss_dssp CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT
T ss_pred CeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCC
Confidence 368999999984 22222 345677888876 999999998
No 136
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=24.06 E-value=1e+02 Score=31.35 Aligned_cols=55 Identities=18% Similarity=0.242 Sum_probs=38.4
Q ss_pred CCcEEEEEEcCCCCC-ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHH
Q 016296 106 QRQRIIVFAGSPVKY-DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAV 162 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~-d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~v 162 (392)
....+|+|||..... .-..+.++.++|++.++.+-++|-|... ....++.+....
T Consensus 325 ~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~--~~~~~~~~~~~~ 380 (536)
T 3vue_A 325 RKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKK--FEKLLKSMEEKY 380 (536)
T ss_dssp TTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHH--HHHHHHHHHHHS
T ss_pred CCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCch--HHHHHHHHHhhc
Confidence 344589999986543 4556788888999999999999888754 234555555433
No 137
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=23.65 E-value=1.5e+02 Score=23.95 Aligned_cols=39 Identities=10% Similarity=0.119 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHH
Q 016296 122 RKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLA 160 (392)
Q Consensus 122 ~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~ 160 (392)
-....++++.|+++||.|.+|.+..-.--..+.+..+++
T Consensus 25 ~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~ 63 (118)
T 3ju3_A 25 KGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLS 63 (118)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHc
Confidence 567888999999999999999999864333455666654
No 138
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=23.55 E-value=67 Score=28.46 Aligned_cols=34 Identities=9% Similarity=0.143 Sum_probs=25.7
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEE
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVN 143 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~ 143 (392)
+||++.+++-+.. - ....+++.|++.|+.|++|-
T Consensus 6 k~IllgvTGs~aa-~-k~~~ll~~L~~~g~~V~vv~ 39 (175)
T 3qjg_A 6 ENVLICLCGSVNS-I-NISHYIIELKSKFDEVNVIA 39 (175)
T ss_dssp CEEEEEECSSGGG-G-GHHHHHHHHTTTCSEEEEEE
T ss_pred CEEEEEEeCHHHH-H-HHHHHHHHHHHCCCEEEEEE
Confidence 6788887664443 2 37788999999999999875
No 139
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=23.53 E-value=3.7e+02 Score=25.99 Aligned_cols=51 Identities=18% Similarity=0.252 Sum_probs=36.5
Q ss_pred ceEEEEEeCCcc--ccCCCCCCcHHHHHHHHHHHHHHhhhcCCCCCcEEEEEecCCC
Q 016296 4 EATMICIDNSEW--MRNGDYSPSRLRAQADAVSLICGAKTQSNPENTVGILTMGGKG 58 (392)
Q Consensus 4 Ea~~IvIDnSes--MrngD~~PtRl~aq~dav~~fv~~k~~~NPes~VGLvtmag~~ 58 (392)
-++++|+|.|++ +.-.|-.++||.........+++... ...+-+|.+++|.
T Consensus 226 ~~iIfv~dls~~dq~l~ed~~~n~~~es~~~~~~i~~~~~----~~~~piILv~NK~ 278 (362)
T 1zcb_A 226 TSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRV----FSNVSIILFLNKT 278 (362)
T ss_dssp CEEEEEEETTCTTCEETTEEEEEHHHHHHHHHHHHHTCGG----GTTSEEEEEEECH
T ss_pred CEEEEEEECccccccccccccccHHHHHHHHHHHHhcchh----hCCCCEEEEEECh
Confidence 479999999986 33444458999999888888887532 1235678888774
No 140
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=22.94 E-value=1e+02 Score=26.05 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=22.9
Q ss_pred ChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHH
Q 016296 121 DRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAV 162 (392)
Q Consensus 121 d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~v 162 (392)
+...+.++++.+++.+ +|.++|+|.... ....|...+
T Consensus 25 ~~~~l~~~~~~i~~a~-~I~i~G~G~S~~----~a~~~~~~l 61 (187)
T 3sho_A 25 QPEAIEAAVEAICRAD-HVIVVGMGFSAA----VAVFLGHGL 61 (187)
T ss_dssp CHHHHHHHHHHHHHCS-EEEEECCGGGHH----HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC-EEEEEecCchHH----HHHHHHHHH
Confidence 4666777777777766 677777776542 444444444
No 141
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=22.80 E-value=62 Score=28.99 Aligned_cols=39 Identities=13% Similarity=0.183 Sum_probs=28.4
Q ss_pred EEEEEEcCCCC-C-ChhhHHHHHHHHHhC-CceEEEEEeCCC
Q 016296 109 RIIVFAGSPVK-Y-DRKVMEMIGKKLKKN-SVAIDIVNFGED 147 (392)
Q Consensus 109 RIVvFvgSp~~-~-d~~~l~~~ak~LKkn-nI~VdiI~fG~e 147 (392)
+|+++.|||.. . +..-+..+++.+++. ++.|.+|.+.+.
T Consensus 3 kIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~~ 44 (242)
T 1sqs_A 3 KIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNS 44 (242)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTTTC
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcccC
Confidence 68899999974 2 233344567778777 999999987754
No 142
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=22.57 E-value=92 Score=27.55 Aligned_cols=40 Identities=8% Similarity=0.127 Sum_probs=29.0
Q ss_pred cEEEEEEcCCC--CC--ChhhHHHHHHHHHhC--CceEEEEEeCCC
Q 016296 108 QRIIVFAGSPV--KY--DRKVMEMIGKKLKKN--SVAIDIVNFGED 147 (392)
Q Consensus 108 ~RIVvFvgSp~--~~--d~~~l~~~ak~LKkn--nI~VdiI~fG~e 147 (392)
++|+++.|||. .. +..-+..+++.+++. +..|.+|.+.+.
T Consensus 5 ~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~~ 50 (211)
T 3p0r_A 5 TKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLYKE 50 (211)
T ss_dssp CEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGGGS
T ss_pred CEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 47999999998 33 222234567777776 899999998864
No 143
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=22.56 E-value=1.5e+02 Score=27.59 Aligned_cols=58 Identities=3% Similarity=-0.028 Sum_probs=37.6
Q ss_pred CcEEEEEEcCCCCC-ChhhHHHHHHHHHh--CCceEEEEEeCCCCCCc--HHHHHHHHHHHcC
Q 016296 107 RQRIIVFAGSPVKY-DRKVMEMIGKKLKK--NSVAIDIVNFGEDDDGK--PEKLEALLAAVNN 164 (392)
Q Consensus 107 ~~RIVvFvgSp~~~-d~~~l~~~ak~LKk--nnI~VdiI~fG~e~~~n--~~~l~~~~~~vn~ 164 (392)
...+|+|+|..... ....+.++.+++++ .++++.|||-|...... .+.++.+++..+-
T Consensus 183 ~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l 245 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGV 245 (413)
T ss_dssp TSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTC
T ss_pred CceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCc
Confidence 45678888884432 44556677777654 36899999988754111 2678888877653
No 144
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=22.49 E-value=1.9e+02 Score=23.81 Aligned_cols=55 Identities=11% Similarity=0.110 Sum_probs=33.4
Q ss_pred cEEEEEEcCCCC--C--ChhhHHHHHHHHHhCCc----eEEEEEeCCCCCCcHHHHHHHHHHHc
Q 016296 108 QRIIVFAGSPVK--Y--DRKVMEMIGKKLKKNSV----AIDIVNFGEDDDGKPEKLEALLAAVN 163 (392)
Q Consensus 108 ~RIVvFvgSp~~--~--d~~~l~~~ak~LKknnI----~VdiI~fG~e~~~n~~~l~~~~~~vn 163 (392)
+.+||++.++-. | .-..+.++.+++++.++ +|.+|++.... .+.+.++.|++..+
T Consensus 60 k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~-~~~~~~~~~~~~~~ 122 (183)
T 3lwa_A 60 QVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD-YSRDIAQDFVTDNG 122 (183)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC-CCHHHHHHHHHHTT
T ss_pred CEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC-CCHHHHHHHHHHcC
Confidence 345555544321 2 23457788888888888 44555555444 36789999998654
No 145
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=22.48 E-value=4.3e+02 Score=26.14 Aligned_cols=63 Identities=19% Similarity=0.238 Sum_probs=41.6
Q ss_pred CcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCCh--------------h--------hHHHHHHHHHhCCceEE
Q 016296 83 GEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYDR--------------K--------VMEMIGKKLKKNSVAID 140 (392)
Q Consensus 83 G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d~--------------~--------~l~~~ak~LKknnI~Vd 140 (392)
|..++...+.++..|-++ .-+-+|-|-.|+.=.|| . ....++++||++++.|+
T Consensus 84 g~~d~~~~~~~a~~Ak~~-----GLkVlldfHysD~WadPg~Q~~P~aW~~~~~~~l~~~~~~yt~~~l~~l~~~g~~~~ 158 (399)
T 1ur4_A 84 GNNDLEKAIQIGKRATAN-----GMKLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIG 158 (399)
T ss_dssp TCCCHHHHHHHHHHHHHT-----TCEEEEEECSSSSCCSSSCCCCCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCHHHHHHHHHHHHHC-----CCEEEEEeccCCccCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 557888888888877443 22334445555332222 1 22356788999999999
Q ss_pred EEEeCCCCCCc
Q 016296 141 IVNFGEDDDGK 151 (392)
Q Consensus 141 iI~fG~e~~~n 151 (392)
.|.+|.|. .+
T Consensus 159 ~vqvGNEi-~~ 168 (399)
T 1ur4_A 159 MVQVGNET-NG 168 (399)
T ss_dssp EEEESSSC-SS
T ss_pred EEEEcccc-cc
Confidence 99999988 44
No 146
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=22.45 E-value=4.5e+02 Score=24.02 Aligned_cols=74 Identities=12% Similarity=0.198 Sum_probs=44.8
Q ss_pred CCCcEEEEEEcCCCCC-ChhhHHHHHHHHHhCC-ceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecCCChhh
Q 016296 105 NQRQRIIVFAGSPVKY-DRKVMEMIGKKLKKNS-VAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPTGPNAL 180 (392)
Q Consensus 105 ~~~~RIVvFvgSp~~~-d~~~l~~~ak~LKknn-I~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~g~~lL 180 (392)
....|+|+++.++... ..+-+..+-+.+++.| |.+.++-.--..+ .+.+..+.+.+....+.-++.+--|+.+|
T Consensus 32 ~~~d~ViLv~~~~~~~~~~~A~~~i~~~l~~~~~i~~e~~~vd~~df--~~~v~~i~~~i~~~~~~iivnlsGG~Ril 107 (244)
T 2wte_A 32 QKEDSLVIVVPSPIVSGTRAAIESLRAQISRLNYPPPRIYEIEITDF--NLALSKILDIILTLPEPIISDLTMGMRMI 107 (244)
T ss_dssp CTTSEEEEEEESSCCHHHHHHHHHHHHHHHHHTCCCEEEEEECCCSH--HHHHHHHHHHHTTSCSSEEEECSSSCHHH
T ss_pred CCCCEEEEEeCCCcchhHHHHHHHHHHHHHHcCCCceEEEEECCccH--HHHHHHHHHHHhhcCCcEEEEecCCchHH
Confidence 4566788888877543 3333444455555454 5777777654322 45556666666654456777788888754
No 147
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=22.28 E-value=88 Score=29.37 Aligned_cols=42 Identities=2% Similarity=0.015 Sum_probs=31.8
Q ss_pred CCcEEEEEEcCCCCC-ChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 106 QRQRIIVFAGSPVKY-DRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~-d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
.++||++++.++... .+.-+..+++.|++.|..|.++.+...
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 457888887775332 345677899999999999999988654
No 148
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=21.96 E-value=1.3e+02 Score=25.64 Aligned_cols=48 Identities=15% Similarity=0.182 Sum_probs=31.7
Q ss_pred CcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHH
Q 016296 107 RQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALL 159 (392)
Q Consensus 107 ~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~ 159 (392)
..++|||+.+ ......+++.|++.++.|..+.=+-...+...+++.|-
T Consensus 46 ~~k~lVF~~~-----~~~~~~l~~~L~~~g~~~~~lhg~~~~~~r~~~~~~f~ 93 (185)
T 2jgn_A 46 DSLTLVFVET-----KKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 93 (185)
T ss_dssp CSCEEEEESC-----HHHHHHHHHHHHHTTCCEEEEC--------CHHHHHHH
T ss_pred CCeEEEEECC-----HHHHHHHHHHHHHcCCceEEEeCCCCHHHHHHHHHHHH
Confidence 4568999766 67788999999999998877753332223456777775
No 149
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=21.88 E-value=4.2e+02 Score=23.52 Aligned_cols=104 Identities=11% Similarity=0.157 Sum_probs=53.7
Q ss_pred cHHHHHHHHHHHHHHhhhcC-CCCCcEEEEEecCCCceEEECCCCCHHHHHHhhcc-------cccCCcCcHHHHHHHHH
Q 016296 24 SRLRAQADAVSLICGAKTQS-NPENTVGILTMGGKGVRVLTTPTTDLGKILACMHE-------LDIGGEMNIAAGIQVAQ 95 (392)
Q Consensus 24 tRl~aq~dav~~fv~~k~~~-NPes~VGLvtmag~~~~vlvtlT~D~~kil~~L~~-------i~~~G~~sL~~gL~vA~ 95 (392)
.-+....+.+..+++...+. =+.++|.|+-|+..+. -.+..++.. +.+.|-.....
T Consensus 108 ~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~----------~a~~~~~~~~~~~a~~i~~sG~lp~~~------ 171 (246)
T 4f21_A 108 EGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGI----------IATYTAITSQRKLGGIMALSTYLPAWD------ 171 (246)
T ss_dssp C-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTH----------HHHHHHTTCSSCCCEEEEESCCCTTHH------
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHH----------HHHHHHHhCccccccceehhhccCccc------
Confidence 34556666777777665433 3667899999987753 111112211 12233222111
Q ss_pred HHhccc-CCCCCCcEEEEEEcCCCCC-ChhhHHHHHHHHHhCCceEEEEEe
Q 016296 96 LALKHR-QNKNQRQRIIVFAGSPVKY-DRKVMEMIGKKLKKNSVAIDIVNF 144 (392)
Q Consensus 96 laLkhr-~~k~~~~RIVvFvgSp~~~-d~~~l~~~ak~LKknnI~VdiI~f 144 (392)
.+... ...+....|.++=|..-.. ......++.+.|++.|+.|...-|
T Consensus 172 -~~~~~~~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y 221 (246)
T 4f21_A 172 -NFKGKITSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHY 221 (246)
T ss_dssp -HHSTTCCGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred -cccccccccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 11111 1111222354444443222 455667888999999998887776
No 150
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=21.87 E-value=1.6e+02 Score=25.50 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=23.2
Q ss_pred EEEEEEcCCCCC-ChhhHHHHHHHHHhCCceEEEEEe
Q 016296 109 RIIVFAGSPVKY-DRKVMEMIGKKLKKNSVAIDIVNF 144 (392)
Q Consensus 109 RIVvFvgSp~~~-d~~~l~~~ak~LKknnI~VdiI~f 144 (392)
.|.++-|..-.. ......++.+.|++.|+.|..+-|
T Consensus 153 Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~y 189 (210)
T 4h0c_A 153 PVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVY 189 (210)
T ss_dssp EEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 344444443221 345667788888888888888877
No 151
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=21.71 E-value=2.8e+02 Score=26.68 Aligned_cols=39 Identities=13% Similarity=0.225 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcC
Q 016296 125 MEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNN 164 (392)
Q Consensus 125 l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~ 164 (392)
+.++.+.|++.++.+.++.=++.. .+.+.+++.++....
T Consensus 58 ~~~v~~~L~~~g~~~~~~~~~~~~-p~~~~v~~~~~~~~~ 96 (371)
T 1o2d_A 58 LDDLKKLLDETEISYEIFDEVEEN-PSFDNVMKAVERYRN 96 (371)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSS-CBHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCeEEEeCCccCC-CCHHHHHHHHHHHHh
Confidence 344444555555544433322322 344555555555443
No 152
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=21.49 E-value=1e+02 Score=25.94 Aligned_cols=49 Identities=10% Similarity=0.116 Sum_probs=32.5
Q ss_pred EEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHH
Q 016296 110 IIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAA 161 (392)
Q Consensus 110 IVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~ 161 (392)
-|.|.|+.-...+.-+.++++.+|+.++.+.+..=|.- +.+.++.|.+.
T Consensus 6 ~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l---~~~~~~~l~~~ 54 (182)
T 3can_A 6 GVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLA---RKETVDEVMRN 54 (182)
T ss_dssp CEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCC---CHHHHHHHHHT
T ss_pred EEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCC---CHHHHHHHHhh
Confidence 46677765555554456888888888888877766652 24566666643
No 153
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=21.38 E-value=2.3e+02 Score=26.94 Aligned_cols=41 Identities=5% Similarity=0.088 Sum_probs=31.4
Q ss_pred CcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCC
Q 016296 107 RQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGED 147 (392)
Q Consensus 107 ~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e 147 (392)
.++|+|+.+|+...+..-...+++.+++.++.|.++.+...
T Consensus 256 ~~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~ 296 (414)
T 2q9u_A 256 QKKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSS 296 (414)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGC
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcC
Confidence 35788888997555566667778888888999999988654
No 154
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=21.18 E-value=82 Score=31.17 Aligned_cols=53 Identities=19% Similarity=0.153 Sum_probs=33.7
Q ss_pred CcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCCCC-----hhhHHHHHHHHHhCCceEEEEEe
Q 016296 83 GEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVKYD-----RKVMEMIGKKLKKNSVAIDIVNF 144 (392)
Q Consensus 83 G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~~d-----~~~l~~~ak~LKknnI~VdiI~f 144 (392)
|.--+..+.+.|+.+- + .. .||+..-.... ...++.+++.|+++||+||.|||
T Consensus 147 g~~~i~~af~~Ar~~d-----P--~a--~l~~Ndyn~~~~~~~k~~~~~~~v~~l~~~g~~iDgiG~ 204 (436)
T 2d1z_A 147 GNDWIEVAFRTARAAD-----P--AA--KLCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGF 204 (436)
T ss_dssp CTTHHHHHHHHHHHHC-----T--TS--EEEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred chHHHHHHHHHHHhhC-----C--CC--EEEEeccccccCChhHHHHHHHHHHHHHhCCCcccEEEE
Confidence 4445666777776652 1 22 34553222221 12567889999999999999999
No 155
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=21.10 E-value=79 Score=26.95 Aligned_cols=37 Identities=11% Similarity=0.172 Sum_probs=31.9
Q ss_pred EEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCC
Q 016296 110 IIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 110 IVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~ 146 (392)
+|-+||......++-+.++.+.|.++||.|..|++.+
T Consensus 97 ~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~Se 133 (167)
T 2dt9_A 97 KVSIVGVGLASTPEVPAKMFQAVASTGANIEMIATSE 133 (167)
T ss_dssp EEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEEECS
T ss_pred EEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEEccC
Confidence 4778898778789999999999999999999888553
No 156
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=21.05 E-value=1.1e+02 Score=27.83 Aligned_cols=35 Identities=9% Similarity=-0.017 Sum_probs=26.1
Q ss_pred CcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEE
Q 016296 107 RQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVN 143 (392)
Q Consensus 107 ~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~ 143 (392)
.+||||-|++-+.. --...+++.|++.|+.|++|-
T Consensus 4 ~k~IllgvTGaiaa--~k~~~ll~~L~~~g~eV~vv~ 38 (209)
T 3zqu_A 4 PERITLAMTGASGA--QYGLRLLDCLVQEEREVHFLI 38 (209)
T ss_dssp CSEEEEEECSSSCH--HHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEEECHHHH--HHHHHHHHHHHHCCCEEEEEE
Confidence 36788887664433 236788999999999999874
No 157
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=20.96 E-value=31 Score=30.47 Aligned_cols=67 Identities=18% Similarity=0.244 Sum_probs=38.5
Q ss_pred CcEEEEEEcCCCCCC-hhhHHHHHHHHHhCCceEE-EEEeCCCCCCc---------HHHHHHHHHHHcCCCCceEEEecC
Q 016296 107 RQRIIVFAGSPVKYD-RKVMEMIGKKLKKNSVAID-IVNFGEDDDGK---------PEKLEALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 107 ~~RIVvFvgSp~~~d-~~~l~~~ak~LKknnI~Vd-iI~fG~e~~~n---------~~~l~~~~~~vn~~d~Sh~v~vp~ 175 (392)
.+||++|+|||.... ...+.+.+.++.+.++.|. +|.+.+--.-+ .+-.+.|.+.+..-| .+|.+-|
T Consensus 4 ~mkil~I~GS~r~~s~t~~l~~~~~~~~~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~AD--~iv~~sP 81 (193)
T 3svl_A 4 KLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQAD--GVVIVTP 81 (193)
T ss_dssp CEEEEEEECCCSTTCHHHHHHHHGGGTSCTTEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHHSS--EEEEEEC
T ss_pred CCEEEEEEccCCCCCHHHHHHHHHHHHccCCCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHHCC--EEEEEec
Confidence 468999999988642 2233333333445688888 88887522111 234556666665433 4555544
No 158
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=20.94 E-value=47 Score=28.11 Aligned_cols=39 Identities=23% Similarity=0.397 Sum_probs=28.9
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCC
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGE 146 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~ 146 (392)
++++|+.+|....++.-...+++.|...++.|.++.+..
T Consensus 10 ~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 48 (167)
T 1ykg_A 10 PGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGD 48 (167)
T ss_dssp --CEEEEECSSSHHHHHHHHHHHHHHHHTCCCEEEEGGG
T ss_pred CeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEeehhh
Confidence 457777788765566667788888888899888887754
No 159
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=20.93 E-value=1.2e+02 Score=28.62 Aligned_cols=43 Identities=7% Similarity=0.176 Sum_probs=31.8
Q ss_pred CCcEEEEEEcCCCCCC--hhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 106 QRQRIIVFAGSPVKYD--RKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~d--~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
..++|+|+.++|.... ..-....++.|++.|..|.++-+.+..
T Consensus 21 ~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~~~ 65 (280)
T 4gi5_A 21 QSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDLYAMR 65 (280)
T ss_dssp -CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETTTTT
T ss_pred hCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEccccC
Confidence 5678999999997542 222345688899999999999987654
No 160
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=20.89 E-value=82 Score=27.39 Aligned_cols=65 Identities=9% Similarity=0.108 Sum_probs=35.2
Q ss_pred cEEEEEEcCCCCCC-hhhH-HHHHHHHHhCCceEEEEEeCCCCCC-------cHHHHHHHHHHHcCCCCceEEEecC
Q 016296 108 QRIIVFAGSPVKYD-RKVM-EMIGKKLKKNSVAIDIVNFGEDDDG-------KPEKLEALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 108 ~RIVvFvgSp~~~d-~~~l-~~~ak~LKknnI~VdiI~fG~e~~~-------n~~~l~~~~~~vn~~d~Sh~v~vp~ 175 (392)
++|++|.|||.... ...+ ..+++.++ .++.|.+|.+.+--.- ..+..+.+.+.+..-| .+|.+-|
T Consensus 3 ~kilii~gS~r~~s~t~~la~~~~~~~~-~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD--~iV~~sP 76 (192)
T 3fvw_A 3 KRILFIVGSFSEGSFNRQLAKKAETIIG-DRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEAD--AIWIFSP 76 (192)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHHHHT-TSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCS--EEEEECC
T ss_pred CEEEEEEcCCCCCCHHHHHHHHHHHhcC-CCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCC--EEEEECc
Confidence 36888888886431 1223 33455554 6788888888642110 1233456666665323 4555544
No 161
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=20.73 E-value=63 Score=28.70 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=25.0
Q ss_pred cEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEE
Q 016296 108 QRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVN 143 (392)
Q Consensus 108 ~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~ 143 (392)
+||++.+++.+.. -....+++.|++.++.|++|-
T Consensus 3 k~IllgvTGs~aa--~k~~~l~~~L~~~g~~V~vv~ 36 (181)
T 1g63_A 3 GKLLICATASINV--ININHYIVELKQHFDEVNILF 36 (181)
T ss_dssp CCEEEEECSCGGG--GGHHHHHHHHTTTSSCEEEEE
T ss_pred CEEEEEEECHHHH--HHHHHHHHHHHHCCCEEEEEE
Confidence 4677777554433 256788999999999999884
No 162
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=20.53 E-value=1.7e+02 Score=27.58 Aligned_cols=49 Identities=14% Similarity=0.095 Sum_probs=33.7
Q ss_pred hhhHHHHHHHHHhCCceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCceEEEecC
Q 016296 122 RKVMEMIGKKLKKNSVAIDIVNFGEDDDGKPEKLEALLAAVNNNDSSHLVHVPT 175 (392)
Q Consensus 122 ~~~l~~~ak~LKknnI~VdiI~fG~e~~~n~~~l~~~~~~vn~~d~Sh~v~vp~ 175 (392)
-....+++++|+++||.|.||.+-.-.--..+.+.++++.++ ++|+|-.
T Consensus 214 ~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~-----~vv~vEe 262 (324)
T 1umd_B 214 MPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTG-----RVVLVSD 262 (324)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCEEETCCHHHHHHHHHHHS-----CEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeceecCCCHHHHHHHHhcCC-----eEEEEec
Confidence 345778899999999999999988732122345666666553 5777643
No 163
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=20.50 E-value=1.5e+02 Score=23.04 Aligned_cols=54 Identities=13% Similarity=0.036 Sum_probs=33.9
Q ss_pred cHHHHHHHHHHHhcccCCCCCCcEEEEEEcCCCC-C--ChhhHHHHHHHHHhCCceEEEEE
Q 016296 86 NIAAGIQVAQLALKHRQNKNQRQRIIVFAGSPVK-Y--DRKVMEMIGKKLKKNSVAIDIVN 143 (392)
Q Consensus 86 sL~~gL~vA~laLkhr~~k~~~~RIVvFvgSp~~-~--d~~~l~~~ak~LKknnI~VdiI~ 143 (392)
.+.++|..|...++.. + ...|.||+.++.- . ....+.+..+.|++.||++.+-+
T Consensus 12 ~~~~al~~~~n~~~~~--~--~~~v~vv~~g~gv~~~~~~~~~~~~i~~l~~~gV~~~~C~ 68 (108)
T 2pd2_A 12 KVPQALRSVINLYNDI--K--DAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNILIVGCE 68 (108)
T ss_dssp GHHHHHHHHHHHHHHS--T--TCEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEH
T ss_pred HHHHHHHHHHHHHhhC--C--CCeEEEEEcChHHHHHHcCchHHHHHHHHHHCcCEEEecH
Confidence 4556777777777752 2 3445555555442 1 23357788888888888777644
No 164
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=20.44 E-value=1.1e+02 Score=26.96 Aligned_cols=37 Identities=11% Similarity=0.238 Sum_probs=26.0
Q ss_pred CCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEe
Q 016296 105 NQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNF 144 (392)
Q Consensus 105 ~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~f 144 (392)
...-|+|||+-|. ....+.+.|+++|+.|+.|-.|.=
T Consensus 76 ~~~D~vii~S~Sg---~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 76 HAVDRVLIFTPDT---ERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CTTCEEEEEESCS---CCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCEEEEEeCCC---CCHHHHHHHHHHHHCCCcEEEEeC
Confidence 3556677776553 345789999999999996555443
No 165
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=20.38 E-value=3.2e+02 Score=27.55 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=52.5
Q ss_pred CcCcHHHHHHHHHHHhcccCCC-CCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeCCCCC---CcHHHHHHH
Q 016296 83 GEMNIAAGIQVAQLALKHRQNK-NQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFGEDDD---GKPEKLEAL 158 (392)
Q Consensus 83 G~~sL~~gL~vA~laLkhr~~k-~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG~e~~---~n~~~l~~~ 158 (392)
|++.| |-+++..+|++.... ......++|+++ +.|+..+..+.+.+.-++--|-||+-.-..- .|...++..
T Consensus 81 GGS~L--G~~~v~~aL~~~~~~~~~~~~~~~fv~~--NvDp~~i~~~l~~l~~~~TlviviSKSGtT~ET~~~~~~ar~~ 156 (445)
T 1b0z_A 81 GGSYL--GARAAIEALSHTFHNQMNDTTQIYFAGQ--NISSTYISHLLDVLEGKDLSINVISKSGTTTEPAIAFRIFRDY 156 (445)
T ss_dssp GGGTH--HHHHHHHHHSCTTGGGSTTSCEEEEESS--SCCHHHHHHHHHHHTTCCEEEEEECSSSCCHHHHHHHHHHHHH
T ss_pred ChhHH--HHHHHHHHHhhhcccccccCCceEEEeC--CCCHHHHHHHHhhCCcCcEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 44554 667788889874210 001135677765 3489999999999988888888887553321 223333332
Q ss_pred HHHHcCC--CCceEEEecCC
Q 016296 159 LAAVNNN--DSSHLVHVPTG 176 (392)
Q Consensus 159 ~~~vn~~--d~Sh~v~vp~g 176 (392)
+..-.+. -..|+|.|-..
T Consensus 157 l~~~~G~~~~~~~~vavT~~ 176 (445)
T 1b0z_A 157 MEKKYGKEEARKRIYVTTDR 176 (445)
T ss_dssp HHHHHCHHHHGGGEEEEECS
T ss_pred HHHhcCchhhcCEEEEEecC
Confidence 2211111 12799888654
No 166
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=20.37 E-value=1.8e+02 Score=28.21 Aligned_cols=62 Identities=18% Similarity=0.172 Sum_probs=40.9
Q ss_pred CcCcHHHHHHHHHHHhcccCCCCCCcEEEEEEcC-CCCCC---hhhHHHHHHHHHhCCceEEEEEeCCCC
Q 016296 83 GEMNIAAGIQVAQLALKHRQNKNQRQRIIVFAGS-PVKYD---RKVMEMIGKKLKKNSVAIDIVNFGEDD 148 (392)
Q Consensus 83 G~~sL~~gL~vA~laLkhr~~k~~~~RIVvFvgS-p~~~d---~~~l~~~ak~LKknnI~VdiI~fG~e~ 148 (392)
|.--+..+.+.|+.+|... ..+.. .+|+-. -++.. ...+.+++|.|+..||+||-|||=...
T Consensus 151 G~~~i~~aF~~Ar~a~~~~--~dP~a--~L~~NDYn~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~ 216 (335)
T 4f8x_A 151 GEEYFYLAFKYAQEALAQI--GANDV--KLYYNDYGIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHF 216 (335)
T ss_dssp CTHHHHHHHHHHHHHHHHT--TCTTS--EEEEEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEE
T ss_pred CHHHHHHHHHHHHHhcccc--CCCCc--EEEEecccccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeee
Confidence 5556678899999997532 12333 345422 12221 246889999999999999999986543
No 167
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=20.26 E-value=90 Score=26.16 Aligned_cols=33 Identities=9% Similarity=0.304 Sum_probs=26.2
Q ss_pred CCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEE
Q 016296 106 QRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVN 143 (392)
Q Consensus 106 ~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~ 143 (392)
...++|||+.+ ......+++.|++.++.+..+.
T Consensus 33 ~~~~~lVF~~~-----~~~~~~l~~~L~~~~~~~~~~~ 65 (175)
T 2rb4_A 33 TIGQAIIFCQT-----RRNAKWLTVEMIQDGHQVSLLS 65 (175)
T ss_dssp CCSEEEEECSC-----HHHHHHHHHHHHTTTCCEEEEC
T ss_pred CCCCEEEEECC-----HHHHHHHHHHHHHcCCcEEEEe
Confidence 34578999665 6778899999999999877664
No 168
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=20.18 E-value=2.6e+02 Score=22.50 Aligned_cols=53 Identities=23% Similarity=0.248 Sum_probs=33.2
Q ss_pred EEEEEEcCCCC--C--ChhhHHHHHHHHHhCC--ceEEEEEeCCCCCCcHHHHHHHHHHH
Q 016296 109 RIIVFAGSPVK--Y--DRKVMEMIGKKLKKNS--VAIDIVNFGEDDDGKPEKLEALLAAV 162 (392)
Q Consensus 109 RIVvFvgSp~~--~--d~~~l~~~ak~LKknn--I~VdiI~fG~e~~~n~~~l~~~~~~v 162 (392)
.+|.|..+-.. | .-..+.++.+++++.+ |.|-.|++..+. ++.+.+++|++..
T Consensus 36 vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~-d~~~~~~~~~~~~ 94 (174)
T 1xzo_A 36 WLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPEN-DKPKQLKKFAANY 94 (174)
T ss_dssp EEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTT-CCHHHHHHHHTTS
T ss_pred EEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCC-CCHHHHHHHHHHc
Confidence 45666654322 3 2346778888888886 665555554433 4678899998644
No 169
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=20.11 E-value=2.6e+02 Score=23.14 Aligned_cols=39 Identities=13% Similarity=0.252 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHhCCceEEEEE---eCCCCCCcHHHHHHHHHH
Q 016296 123 KVMEMIGKKLKKNSVAIDIVN---FGEDDDGKPEKLEALLAA 161 (392)
Q Consensus 123 ~~l~~~ak~LKknnI~VdiI~---fG~e~~~n~~~l~~~~~~ 161 (392)
..+.++.++++..++.|-.|+ |+.....+.+.+++|++.
T Consensus 58 p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~ 99 (180)
T 3kij_A 58 LGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARK 99 (180)
T ss_dssp HHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHH
Confidence 356677888877777666665 333222577899999987
No 170
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=20.03 E-value=1.7e+02 Score=27.27 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=29.0
Q ss_pred CCCcEEEEEEcCCCCCChhhHHHHHHHHHhCCceEEEEEeC
Q 016296 105 NQRQRIIVFAGSPVKYDRKVMEMIGKKLKKNSVAIDIVNFG 145 (392)
Q Consensus 105 ~~~~RIVvFvgSp~~~d~~~l~~~ak~LKknnI~VdiI~fG 145 (392)
-++-.++++-||.. .+.+.+..+++|+++|.|-..++-
T Consensus 143 lpr~~~lvlags~m---gg~i~~~v~~~~~~~i~vi~l~m~ 180 (223)
T 1y7p_A 143 LHRAEVLVLAGGIM---GGKITEEVKKLRKSGIRVISLSMF 180 (223)
T ss_dssp STTEEEEEEESSBC---CTHHHHHHHHHGGGTCEEEEESCB
T ss_pred ccccceeeEecccc---cchHHHHHHHHHHCCCeEEEecCC
Confidence 46777888888864 568999999999998876655443
Done!