Query 016297
Match_columns 392
No_of_seqs 319 out of 2165
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 11:13:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016297.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016297hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ddh_A Acyl-COA oxidase; beta 100.0 9.1E-58 3.1E-62 473.5 39.2 384 5-392 3-389 (661)
2 1w07_A Acyl-COA oxidase; oxido 100.0 5.2E-57 1.8E-61 468.4 42.0 380 1-391 1-391 (659)
3 1ukw_A Acyl-COA dehydrogenase; 100.0 3.5E-50 1.2E-54 393.0 25.4 307 26-391 4-329 (379)
4 2d29_A Acyl-COA dehydrogenase; 100.0 1.7E-50 5.9E-55 396.2 22.9 308 26-391 6-336 (387)
5 3pfd_A Acyl-COA dehydrogenase; 100.0 1.1E-50 3.9E-55 398.3 21.2 308 26-391 18-344 (393)
6 1buc_A Butyryl-COA dehydrogena 100.0 6.4E-50 2.2E-54 391.7 26.4 309 26-391 4-334 (383)
7 2jif_A Short/branched chain sp 100.0 1.7E-50 5.9E-55 398.2 22.4 308 25-391 27-353 (404)
8 3p4t_A Putative acyl-COA dehyd 100.0 4.7E-50 1.6E-54 395.1 24.1 314 18-391 19-352 (403)
9 3r7k_A Probable acyl COA dehyd 100.0 3.6E-50 1.2E-54 396.0 22.9 307 26-391 28-354 (403)
10 2vig_A Short-chain specific ac 100.0 7.3E-50 2.5E-54 392.3 25.0 308 26-391 5-331 (391)
11 2pg0_A Acyl-COA dehydrogenase; 100.0 1.3E-49 4.5E-54 389.7 26.6 308 26-391 9-336 (385)
12 3owa_A Acyl-COA dehydrogenase; 100.0 9.9E-50 3.4E-54 408.9 26.6 319 26-391 32-375 (597)
13 2z1q_A Acyl-COA dehydrogenase; 100.0 3.5E-49 1.2E-53 404.7 29.5 315 26-391 27-365 (577)
14 1ivh_A Isovaleryl-COA dehydrog 100.0 6.9E-50 2.4E-54 392.8 23.0 308 26-391 12-342 (394)
15 2dvl_A Acyl-COA dehydrogenase; 100.0 1E-49 3.6E-54 388.7 23.2 302 27-391 3-323 (372)
16 1egd_A Medium chain acyl-COA d 100.0 1.3E-49 4.5E-54 391.1 23.4 308 26-391 15-343 (396)
17 3ii9_A Glutaryl-COA dehydrogen 100.0 6.7E-50 2.3E-54 393.2 20.7 307 25-391 17-342 (396)
18 1rx0_A Acyl-COA dehydrogenase 100.0 2E-49 6.8E-54 389.4 24.0 307 26-391 18-343 (393)
19 3nf4_A Acyl-COA dehydrogenase; 100.0 3.3E-49 1.1E-53 387.2 22.3 305 26-391 15-338 (387)
20 2ix5_A Acyl-coenzyme A oxidase 100.0 5.2E-49 1.8E-53 390.8 22.7 304 25-391 53-375 (436)
21 4hr3_A Putative acyl-COA dehyd 100.0 1.6E-48 5.5E-53 385.7 26.0 311 25-391 7-361 (415)
22 2eba_A Putative glutaryl-COA d 100.0 1.1E-48 3.9E-53 383.1 23.4 303 26-391 10-332 (385)
23 3swo_A Glutaryl-COA dehydrogen 100.0 9.2E-49 3.2E-53 385.5 22.4 317 11-391 9-344 (399)
24 3sf6_A Glutaryl-COA dehydrogen 100.0 2.1E-48 7.2E-53 383.3 24.8 303 25-391 28-349 (403)
25 3mpi_A Glutaryl-COA dehydrogen 100.0 1.1E-48 3.7E-53 384.8 19.2 307 26-391 4-334 (397)
26 2wbi_A Acyl-COA dehydrogenase 100.0 2.8E-47 9.7E-52 378.1 26.4 321 16-391 14-369 (428)
27 1r2j_A Protein FKBI; polyketid 100.0 9.6E-48 3.3E-52 374.0 21.3 271 67-391 24-314 (366)
28 2uxw_A VERY-long-chain specifi 100.0 2.1E-47 7.2E-52 392.6 23.2 307 28-391 47-381 (607)
29 1siq_A GCD, glutaryl-COA dehyd 100.0 3.4E-47 1.2E-51 373.5 22.5 306 25-391 12-335 (392)
30 3mkh_A Nitroalkane oxidase; ox 100.0 2.5E-46 8.5E-51 372.5 26.7 321 25-391 5-366 (438)
31 2c12_A Nitroalkane oxidase; ox 100.0 3.2E-45 1.1E-49 364.5 23.5 315 26-391 5-369 (439)
32 3mxl_A Nitrososynthase; flavin 100.0 8.4E-43 2.9E-47 342.5 16.8 311 26-391 8-343 (395)
33 3m9v_A FAD-dependent oxidoredu 100.0 4.1E-42 1.4E-46 342.2 18.1 318 17-391 12-354 (439)
34 2or0_A Hydroxylase; APC7385, r 100.0 1.3E-41 4.3E-46 336.2 19.7 306 25-391 16-351 (414)
35 2rfq_A 3-HSA hydroxylase, oxyg 100.0 7.7E-40 2.6E-44 321.4 22.6 298 33-391 11-336 (394)
36 2jbr_A P-hydroxyphenylacetate 100.0 3.2E-40 1.1E-44 326.9 19.4 299 32-391 38-364 (422)
37 3djl_A Protein AIDB; alpha hel 100.0 3.9E-38 1.3E-42 319.2 21.3 274 70-391 89-392 (541)
38 1u8v_A Gamma-aminobutyrate met 100.0 4.6E-31 1.6E-35 264.3 18.6 235 109-391 119-380 (490)
39 2yyk_A 4-hydroxyphenylacetate- 100.0 6.3E-31 2.2E-35 263.0 18.4 230 115-391 122-372 (481)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 1.4E-28 4.9E-33 246.0 19.1 231 113-391 127-376 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 99.8 3.1E-20 1.1E-24 186.0 19.7 231 117-391 134-377 (517)
42 3owa_A Acyl-COA dehydrogenase; 83.0 5.6 0.00019 40.2 10.1 74 298-390 469-542 (597)
43 2uxw_A VERY-long-chain specifi 52.1 60 0.002 32.6 9.7 34 323-356 509-542 (607)
No 1
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=9.1e-58 Score=473.52 Aligned_cols=384 Identities=46% Similarity=0.800 Sum_probs=313.4
Q ss_pred cchHHHhccCCCCHHHHHHHhcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 016297 5 DQLAPERKKAQFDVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLSEE 84 (392)
Q Consensus 5 ~~~~~~r~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~~e~ 84 (392)
+||++||.+++||+++|..+|+|++++.++|+++++++.++|.|.......+++++.++....+...+.+.+.++|+...
T Consensus 3 ~~l~~er~~~~f~~~~l~~~l~g~~~~~~~r~~~~~~l~~~p~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~ 82 (661)
T 2ddh_A 3 PDLRKERASATFNPELITHILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYEVAVKKSATMVKKMREYGISDP 82 (661)
T ss_dssp HHHHHHHHHCSSCHHHHHHHHHTSHHHHHHHHHHHHHHHTCGGGCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred hHHHHHHhhCCCCHHHHHHHHCCChhHHHHHHHHHHHHhcCcccccCCcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 48999999999999999999999999999999999999999887654444567877777766666666666667777532
Q ss_pred HHHH-HhhhcC--CchHHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCe
Q 016297 85 EASM-LRSSVD--EPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDE 161 (392)
Q Consensus 85 ~gg~-~~~~~~--~~~~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~ 161 (392)
.... ...++. .+.++.+|+++++.+|..+|+++|+++|||++++|++++|+++|||++|||+.+++|+|++++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~ 162 (661)
T 2ddh_A 83 EEIMWFKNSVHRGHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQE 162 (661)
T ss_dssp HHHHHHHHHHHTTCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTE
T ss_pred hHHHHHHHHhccchhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCe
Confidence 2111 111222 2466788888999999999999999999999999999999999999999999999999999876789
Q ss_pred EEEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCcee
Q 016297 162 FVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGV 241 (392)
Q Consensus 162 ~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~ 241 (392)
|+||||+++|+|+|++|++..||+++|+|++..++++.|+++|+||+++.+++.+.|||++.+.|+++| +++++++.
T Consensus 163 ~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~G---l~g~~~~~ 239 (661)
T 2ddh_A 163 FILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFG---YEEMDNGY 239 (661)
T ss_dssp EEEECCSSTTSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSS---CTTCCCEE
T ss_pred EEEcCCCCCeEEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCccccc---CCCCcceE
Confidence 999999999999999985679999999999876555578999999988777777899999999999999 99999999
Q ss_pred EEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCC
Q 016297 242 LRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPE 321 (392)
Q Consensus 242 v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~ 321 (392)
|.|+||+||++++|+..+.+.+.|.+....... ..+..+..+|+.+++.++|+++++++++++|+++|+|||++.+.+|
T Consensus 240 v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~-~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e 318 (661)
T 2ddh_A 240 LKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNK-LTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPE 318 (661)
T ss_dssp EEESSEEEEGGGBCCSSCEECTTCCEECCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCC
T ss_pred EEeccEEECHHHhcCcccccCCCCceeccchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCcc
Confidence 999999999999999765554457664322222 4556777899999999999999999999999999999998767778
Q ss_pred ccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhhC
Q 016297 322 TQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVCY 392 (392)
Q Consensus 322 ~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~i 392 (392)
.||++||.+|++|+++.+.+++++++++++++.+++.......++....++.+..++++|+++++.+.+++
T Consensus 319 ~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~ 389 (661)
T 2ddh_A 319 PQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGI 389 (661)
T ss_dssp CBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999887432221112222223578889999999999998763
No 2
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=5.2e-57 Score=468.43 Aligned_cols=380 Identities=78% Similarity=1.205 Sum_probs=308.2
Q ss_pred CCCccchHHHhccCCCCHHHHHHHhcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcC
Q 016297 1 MDGVDQLAPERKKAQFDVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELR 80 (392)
Q Consensus 1 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG 80 (392)
|.+.+||++||.+++||+++|..|+++++||.++|+++++|+.+++.|.......... ++..|+.+.+.|
T Consensus 1 ~~~~~~l~~er~~~~f~~~~l~~~~~~~~e~~~lr~~vr~~l~~~~~~~~~~~~~~~~----------~~~~~~~l~~~g 70 (659)
T 1w07_A 1 MEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSR----------KELFKSTLRKCA 70 (659)
T ss_dssp -CCCCTTHHHHTTCSSCHHHHHHHHHSSHHHHHHHHHHHHHHHTCGGGCCTTTTSSCH----------HHHHHHHHHHHH
T ss_pred CCchHHHHHHHccCCCCHHHHHHHHCCChHHHHHHHHHHHHHhcCcccccCCccCCCh----------HHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999988764221111222 234555555544
Q ss_pred C----CHHHHHHH------hhhcCCchHHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCc
Q 016297 81 L----SEEEASML------RSSVDEPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLE 150 (392)
Q Consensus 81 ~----~e~~gg~~------~~~~~~~~~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~ 150 (392)
+ |+++|+.. ...++.+.++.+|+++++..|..+|+++||++|||++++|++++|+++|||++|||+.+++
T Consensus 71 ~l~~~p~e~G~~~~~~~~v~e~~~~~~~~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~ 150 (659)
T 1w07_A 71 HAFKRIIELRLNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLE 150 (659)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHCCCCHHHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCC
T ss_pred HHHHhHHHhCCCchHHHHHHHHhccchhhhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccce
Confidence 4 44444211 1122334447778778899999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCeEEEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCccc
Q 016297 151 TTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFG 230 (392)
Q Consensus 151 t~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G 230 (392)
|+|++++++|+|+||||+++|+|+||+|.+..||+++|+|+++.+++++|+++|+||+++.+++.+.|||++.+.|+++|
T Consensus 151 TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G 230 (659)
T 1w07_A 151 TTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMG 230 (659)
T ss_dssp CEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSS
T ss_pred eEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEEccccCCCCCCCCeEEecCccCcc
Confidence 99999866689999999999999999984589999999999876555568999999987666667789999999999998
Q ss_pred CCccCCCCceeEEecceecCcccccccccccCCCCeEEec-CchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016297 231 NGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQS-NVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAV 309 (392)
Q Consensus 231 ~~~~~~~~~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~-~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~ 309 (392)
...+++++++.|.|+||+||++++|+..+.+.++|.++.. .... ..+..+..+|+.+++.++|+++++++++++|+++
T Consensus 231 ~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~~-~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~ 309 (659)
T 1w07_A 231 NGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQ-LVYGTMVYVRQTIVADASNALSRAVCIATRYSAV 309 (659)
T ss_dssp SSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEECSSCGG-GCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCceEEEeccEEECHHHhcCCcCccCCCCceecCCccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4446789999999999999999999976666556777652 1111 3456677899999999999999999999999999
Q ss_pred hcccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHh
Q 016297 310 RRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATA 389 (392)
Q Consensus 310 R~qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~ 389 (392)
|+|||++.+.+|.||++||.+||+|++|.+.+++++++++++++.+++.......++.....+.+..++++|+++++.+.
T Consensus 310 R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~ 389 (659)
T 1w07_A 310 RRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATA 389 (659)
T ss_dssp CBCSCC---CCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999866667779999999999999999999999999999999988765443333322223678899999999999998
Q ss_pred hh
Q 016297 390 VC 391 (392)
Q Consensus 390 ~~ 391 (392)
++
T Consensus 390 ~~ 391 (659)
T 1w07_A 390 DG 391 (659)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 3
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.5e-50 Score=392.97 Aligned_cols=307 Identities=21% Similarity=0.278 Sum_probs=259.4
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..++||.++++++++|+.++.. + .....+....++..+|+.|.++|| |+++||.+.++...
T Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~--~-------~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~e 74 (379)
T 1ukw_A 4 SLTEEQRQLQALARRFAKEVIL--P-------VAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGE 74 (379)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTG--G-------GHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCc--h-------hHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHH
Confidence 4578999999999999976642 0 011122222345679999999998 89999987554221
Q ss_pred -------chH--HHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEec
Q 016297 96 -------PAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (392)
Q Consensus 96 -------~~~--~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~ 166 (392)
+.+ +.+| .++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 75 el~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 150 (379)
T 1ukw_A 75 ELAYACMGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQ--GDHYVLN- 150 (379)
T ss_dssp HHHHHCHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHHhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEe--CCEEEEE-
Confidence 222 3344 36778888999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecc
Q 016297 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (392)
Q Consensus 167 p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~ 246 (392)
|+|.|||| +..||+++|+|+++.++++.++++|+|| .+.|||++.+.|+++| ++++++++|.|+|
T Consensus 151 ----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~~Gv~v~~~~~~~G---~~~~~~~~v~fd~ 215 (379)
T 1ukw_A 151 ----GTKMWISN-GGEAEWVVVFATVNPELRHKGVVALVVE-------RGTPGFKAIKIHGKMG---QRASGTYELVFED 215 (379)
T ss_dssp ----EEEEEEET-TTTEEEEEEEEESCGGGGGGGEEEEEEE-------TTCTTEEEEECCCCSS---CTTSCEEEEEEEE
T ss_pred ----EEEecccC-CCcCCEEEEEEEcCCCCCCCceEEEEEe-------CCCCCeEecCcccccc---CCCCCeeEEEEee
Confidence 99999999 9999999999998644344689999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 016297 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (392)
Q Consensus 247 v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~ 326 (392)
|+||.+++||. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 216 v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~-------~i~~ 276 (379)
T 1ukw_A 216 VKVPVENRLGE------EGEGFK------IAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGE-------PIAN 276 (379)
T ss_dssp EEEEGGGEESC------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSS-------BGGG
T ss_pred EEecHHhcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------chhh
Confidence 99999999984 344443 4556777899999999999999999999999999999999 9999
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 327 ~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||.+||+|++|.+.++++|++++++++.++.. . +....++++|.++++.+.++
T Consensus 277 ~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g-------~-----~~~~~~~~aK~~a~~~a~~~ 329 (379)
T 1ukw_A 277 FQAIQFKLVDMLIGIETARMYTYYAAWLADQG-------L-----PHAHASAIAKAYASEIAFEA 329 (379)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------C-----CCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------C-----chHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988752 1 23457899999999998875
No 4
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=1.7e-50 Score=396.25 Aligned_cols=308 Identities=20% Similarity=0.158 Sum_probs=259.5
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..++||.++++++++|+.++.. + . ....+....++..+|+.|.++|| |+++||.+.++...
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~--~----~---~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 76 (387)
T 2d29_A 6 EEGAEERQVLGPFREFLKAEVA--P----G---AAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVE 76 (387)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTG--G----G---HHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcc--h----h---HHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHH
Confidence 4578999999999999976531 0 0 11122222345678999999997 89999987554221
Q ss_pred -------chH--HHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEec
Q 016297 96 -------PAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (392)
Q Consensus 96 -------~~~--~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~ 166 (392)
+.+ +.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 77 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 153 (387)
T 2d29_A 77 AIAYYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKV--EGGWRLN- 153 (387)
T ss_dssp HHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEe--CCEEEEE-
Confidence 222 3345446778889999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCcceeccCCCCCCCcEEEEEEEEccCC----CCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeE
Q 016297 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDG----QDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVL 242 (392)
Q Consensus 167 p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~----~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v 242 (392)
|+|.|||| +..||+++|+|+++.++ +..|+++|+|| .+.|||++.+.|+++| ++++++++|
T Consensus 154 ----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v 218 (387)
T 2d29_A 154 ----GTKQFITQ-GSVAGVYVVMARTDPPPSPERKHQGISAFAFF-------RPERGLKVGRKEEKLG---LTASDTAQL 218 (387)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECSCCSCGGGTTTTEEEEEEE-------CCSSSEEECCCCCCSS---CTTSCEEEE
T ss_pred ----eEEeccCC-CCcCCEEEEEEEeCCccccCCCCCCeEEEEEe-------CCCCCeeccCcccccC---CCCCCeeEE
Confidence 99999999 89999999999986432 34589999999 7889999999999999 999999999
Q ss_pred EecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCc
Q 016297 243 RFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPET 322 (392)
Q Consensus 243 ~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~ 322 (392)
.|+||+||.+++||. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 219 ~f~~v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~------- 279 (387)
T 2d29_A 219 ILEDLFVPEEALLGE------RGKGFY------DVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGR------- 279 (387)
T ss_dssp EEEEEEEEGGGEESS------TTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------
T ss_pred EEeeEEECHHHcCCC------CCccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCc-------
Confidence 999999999999984 454443 4556778899999999999999999999999999999999
Q ss_pred cccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 323 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 323 ~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||++||.+||+|++|.+.++++|++++++++.++.. . .....++++|.++++.+.++
T Consensus 280 ~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g-------~-----~~~~~~~~aK~~a~~~a~~~ 336 (387)
T 2d29_A 280 PIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAG-------R-----PFTLEAAQAKLFASEAAVKA 336 (387)
T ss_dssp EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C-----CCHHHHHHHHHHHHHHHHHH
T ss_pred chHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------C-----CchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988642 1 13467899999999998875
No 5
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.1e-50 Score=398.31 Aligned_cols=308 Identities=22% Similarity=0.220 Sum_probs=257.1
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..++||.++++++|+|++++... .....+....++.++|+.|.++|| |+++||.+.++...
T Consensus 18 ~~~~e~~~l~~~~r~~~~~~~~~---------~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~e 88 (393)
T 3pfd_A 18 QLPEEHIALREAIRALAEKEIAP---------YAAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIE 88 (393)
T ss_dssp ----CHHHHHHHHHHHHHHHTGG---------GHHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCch---------HHHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHH
Confidence 45689999999999999866421 011122223356788999999998 89999987654221
Q ss_pred -------chHH--HhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEec
Q 016297 96 -------PAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (392)
Q Consensus 96 -------~~~~--~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~ 166 (392)
+.++ ..| .++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 89 ela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln- 164 (393)
T 3pfd_A 89 EVARVDCSASLIPAVN-KLGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVAD--GDDWILN- 164 (393)
T ss_dssp HHHTTCHHHHHHHHHH-HHTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHhhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEc--CCEEEEe-
Confidence 2222 233 35566788899999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecc
Q 016297 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (392)
Q Consensus 167 p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~ 246 (392)
|+|.|+|| +..||+++|+|+++++++..++++|+|| .+.|||++.+.|+++| ++++++++|.|+|
T Consensus 165 ----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fdd 229 (393)
T 3pfd_A 165 ----GSKCWITN-GGKSTWYTVMAVTDPDKGANGISAFMVH-------KDDEGFTVGPKERKLG---IKGSPTTELYFEN 229 (393)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEESCGGGGGGGEEEEEEE-------TTSTTEEEEEECCBSS---CTTSCEEEEEEEE
T ss_pred ----eEEEEecC-CcccCEEEEEEEeCCCCCCCceEEEEEE-------CCCCCeEecCCCCccc---CCCCCceEEEEcc
Confidence 99999999 9999999999998765445789999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 016297 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (392)
Q Consensus 247 v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~ 326 (392)
|+||++++||. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 230 v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-------~i~~ 290 (393)
T 3pfd_A 230 CRIPGDRIIGE------PGTGFK------TALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGR-------PVSD 290 (393)
T ss_dssp EEEEGGGEESS------TTCHHH------HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred EEEcHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCc-------chhh
Confidence 99999999984 454443 4566778899999999999999999999999999999999 9999
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 327 ~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||.+||+|++|.+.++++|++++++++.++... ++....++++|+++++.+.++
T Consensus 291 ~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~-----------~~~~~~~~~aK~~a~~~a~~~ 344 (393)
T 3pfd_A 291 NQGVQFMLADMAMKIEAARLMVYSAAARAERGE-----------GDLGFISAASKCFASDVAMEV 344 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------cchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887632 223456789999999998875
No 6
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.4e-50 Score=391.70 Aligned_cols=309 Identities=19% Similarity=0.169 Sum_probs=260.6
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHH---hhhcCC--
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML---RSSVDE-- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~---~~~~~~-- 95 (392)
..++||.++++++++|+.++.... ....+....++..+|+.|.++|| |+++||.+ .++...
T Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~ 74 (383)
T 1buc_A 4 NLTDIQQDFLKLAHDFGEKKLAPT---------VTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYIL 74 (383)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTT---------HHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCchh---------HHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHH
Confidence 457899999999999998664210 11122222345678999999987 89999988 554221
Q ss_pred ----------chH--HHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEE
Q 016297 96 ----------PAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFV 163 (392)
Q Consensus 96 ----------~~~--~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~ 163 (392)
+.+ +.+|..+++..|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++ +|+|+
T Consensus 75 v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~-~~g~~ 153 (383)
T 1buc_A 75 AVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKND-DGTYT 153 (383)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECT-TSCEE
T ss_pred HHHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcC-CCEEE
Confidence 222 34454577788999999999999999999999999999999999999999999999763 57899
Q ss_pred EecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEE
Q 016297 164 IHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLR 243 (392)
Q Consensus 164 Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~ 243 (392)
|| |+|.|||| +..||+++|+|+++.++++.|+++|+|| .+.|||++.+.|+++| ++++++++|.
T Consensus 154 ln-----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~~Gv~v~~~~~~~g---~~~~~~~~v~ 217 (383)
T 1buc_A 154 LN-----GSKIFITN-GGAADIYIVFAMTDKSKGNHGITAFILE-------DGTPGFTYGKKEDKMG---IHTSQTMELV 217 (383)
T ss_dssp EE-----EEEEEEET-TTTCSEEEEEEESCSSSSTTSEEEEEEE-------TTCTTEEEEEECCCSS---CTTSCEEEEE
T ss_pred EE-----EEEeccCC-CCcCCEEEEEEEeCCCCCCCceEEEEEE-------CCCCCeEecCcccccc---ccCCceeEEE
Confidence 99 99999999 8999999999998654445689999999 7889999999999999 9999999999
Q ss_pred ecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcc
Q 016297 244 FEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQ 323 (392)
Q Consensus 244 f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~ 323 (392)
|+||+||.+++||. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ |
T Consensus 218 f~~v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~-------~ 278 (383)
T 1buc_A 218 FQDVKVPAENMLGE------EGKGFK------IAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGK-------P 278 (383)
T ss_dssp EEEEEECGGGEESC------TTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------E
T ss_pred EccEEeCHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------c
Confidence 99999999999984 355443 4556777899999999999999999999999999999999 9
Q ss_pred ccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 324 VIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 324 i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|++||.+||+|++|.+.++++|++++++++.++.. ......++++|.++++.+.++
T Consensus 279 i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g------------~~~~~~~~~aK~~a~~~a~~~ 334 (383)
T 1buc_A 279 LCKFQSISFKLADMKMQIEAARNLVYKAACKKQEG------------KPFTVDAAIAKRVASDVAMRV 334 (383)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988752 123467899999999998875
No 7
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=1.7e-50 Score=398.20 Aligned_cols=308 Identities=19% Similarity=0.243 Sum_probs=258.6
Q ss_pred hcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC----
Q 016297 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE---- 95 (392)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~---- 95 (392)
+..++||.++++++++|++++... . ....+....++.++|+.|.++|| |+++||.|.++...
T Consensus 27 ~~~~~e~~~l~~~~r~~~~~~~~p------~---~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~ 97 (404)
T 2jif_A 27 QTFTDEEMMIKSSVKKFAQEQIAP------L---VSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVI 97 (404)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHTGG------G---HHHHHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCcc------c---HHHHhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHH
Confidence 556899999999999999976421 0 11122222345679999999998 89999987654221
Q ss_pred --------chH--HHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEe
Q 016297 96 --------PAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (392)
Q Consensus 96 --------~~~--~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln 165 (392)
+.+ +.+|..++..+|..+|+++||++|||++++|+ ++++++|||++|||+..++|+|+++ +|+|+||
T Consensus 98 eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~--g~g~vln 174 (404)
T 2jif_A 98 EELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKE--GDYYVLN 174 (404)
T ss_dssp HHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEe--CCEEEEE
Confidence 222 33455566778889999999999999999986 7899999999999999999999998 8999999
Q ss_pred cCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEec
Q 016297 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (392)
Q Consensus 166 ~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~ 245 (392)
|+|.|||| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| ++++++++|.|+
T Consensus 175 -----G~K~~is~-a~~Ad~~~v~ar~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd 238 (404)
T 2jif_A 175 -----GSKMWISS-AEHAGLFLVMANVDPTIGYKGITSFLVD-------RDTPGLHIGKPENKLG---LRASSTCPLTFE 238 (404)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEESCGGGGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEE
T ss_pred -----eEEEeecC-CcccCEEEEEEEeCCCCCCCceEEEEEe-------cCCCCeEeccCccccc---CCCCceEEEEEc
Confidence 99999999 9999999999998644344689999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 016297 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (392)
Q Consensus 246 ~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~ 325 (392)
||+||++++||. .|.++. ..+..+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 239 ~v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~ 299 (404)
T 2jif_A 239 NVKVPEANILGQ------IGHGYK------YAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGK-------RLF 299 (404)
T ss_dssp EEEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGG
T ss_pred cEEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCC-------ccc
Confidence 999999999985 344443 4556777899999999999999999999999999999999 999
Q ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 326 ~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+||.+||+|++|.+.++++|++++++++.++.. . .....++++|+++++.+.++
T Consensus 300 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g-------~-----~~~~~~~~aK~~a~e~a~~v 353 (404)
T 2jif_A 300 DFQGLQHQVAHVATQLEAARLLTYNAARLLEAG-------K-----PFIKEASMAKYYASEIAGQT 353 (404)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C-----CCHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------C-----ccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887632 1 12345789999999998875
No 8
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=4.7e-50 Score=395.11 Aligned_cols=314 Identities=20% Similarity=0.220 Sum_probs=263.5
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhh
Q 016297 18 VDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSS 92 (392)
Q Consensus 18 ~~~~~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~ 92 (392)
..-|.+ ..++||.++++++++|+.++.... ....+....++.++|+.|.++|| |+++||.|.++
T Consensus 19 ~~~M~~--~~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~ 87 (403)
T 3p4t_A 19 PGSMSI--WTTAEREALRKTVRAFAEREVLPH---------AHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGDG 87 (403)
T ss_dssp ----CT--TSSHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCCT
T ss_pred CCCCCC--CCCHHHHHHHHHHHHHHHHhCchh---------HHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCCH
Confidence 334443 567999999999999999764211 11123333456789999999998 89999987653
Q ss_pred cC------------Cch---HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeC
Q 016297 93 VD------------EPA---FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDP 157 (392)
Q Consensus 93 ~~------------~~~---~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~ 157 (392)
.+ .+. ++..|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++
T Consensus 88 ~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~- 166 (403)
T 3p4t_A 88 ADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLD- 166 (403)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE-
T ss_pred HHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEe-
Confidence 22 133 34455556777888999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCC
Q 016297 158 QTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTM 237 (392)
Q Consensus 158 ~~~~~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~ 237 (392)
+|+|+|| |+|.|||+ +..||+++|+|+++++ +..++++|+|| .+.|||++.+.|+++| ++++
T Consensus 167 -~~g~~ln-----G~K~~vs~-a~~Ad~~~v~a~~~~~-~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~ 228 (403)
T 3p4t_A 167 -GDHYVIN-----GAKTYITS-GVRADYVVTAARTGGP-GAGGVSLIVVD-------KGTPGFEVTRKLDKMG---WRSS 228 (403)
T ss_dssp -TTEEEEE-----EEEEEEET-TTTCSEEEEEEECSSS-SGGGEEEEEEE-------TTCTTEEEEEECCBSS---CTTS
T ss_pred -CCEEEEE-----EEEEEecC-CcccCEEEEEEEeCCC-CCCceEEEEEe-------CCCCCeEecCCCCccc---CCCC
Confidence 8999999 99999999 9999999999998654 45689999999 7889999999999999 9999
Q ss_pred CceeEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 016297 238 DNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKN 317 (392)
Q Consensus 238 ~~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~ 317 (392)
++++|.|+||+||.+++||. .+.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 229 ~~~~v~fddv~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-- 294 (403)
T 3p4t_A 229 DTAELSYTDVRVPVANLVGS------ENTGFA------QIAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGR-- 294 (403)
T ss_dssp CEEEEEEEEEEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred CeeEEEEcceEecHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC--
Confidence 99999999999999999984 344443 4566788899999999999999999999999999999999
Q ss_pred CCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 318 GGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 318 ~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||++||.+||+|++|.+.++++|++++++++.++.. . +.....++++|+++++.+.++
T Consensus 295 -----pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~-------~----~~~~~~~~~aK~~a~~~a~~v 352 (403)
T 3p4t_A 295 -----PLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAG-------E----TNLIAEVCFAKNTAVEAGEWV 352 (403)
T ss_dssp -----EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C----CCCHHHHHHHHHHHHHHHHHH
T ss_pred -----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------C----CCchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988752 1 111567899999999998875
No 9
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=3.6e-50 Score=395.96 Aligned_cols=307 Identities=18% Similarity=0.197 Sum_probs=261.6
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcC------
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~------ 94 (392)
..++||.++++++|+|+.++.... ....+....++.++|+.|.++|| |+++||.|.++.+
T Consensus 28 ~~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 98 (403)
T 3r7k_A 28 WTTPERRALSQMARSFVEREIAPK---------LAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTE 98 (403)
T ss_dssp GGCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCChh---------HHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 457899999999999999764210 11223333456789999999998 8999998765322
Q ss_pred ------Cch---HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEe
Q 016297 95 ------EPA---FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (392)
Q Consensus 95 ------~~~---~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln 165 (392)
.+. ++.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 99 ela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln 176 (403)
T 3r7k_A 99 AILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVRE--GDTYVVN 176 (403)
T ss_dssp HHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEC--SSEEEEE
T ss_pred HHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEE--CCEEEEE
Confidence 121 33335556778889999999999999999999999999999999999999999999988 8999999
Q ss_pred cCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEec
Q 016297 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (392)
Q Consensus 166 ~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~ 245 (392)
|+|.|||+ +..||+++|+|+++++ +..++++|+|| .+.|||++.+.|+++| ++++++++|.|+
T Consensus 177 -----G~K~~vs~-a~~Ad~~~v~a~~~~~-~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd 239 (403)
T 3r7k_A 177 -----GAKTFITS-GVRADFVTTAVRTGGP-GYGGVSLLVID-------KNSPGFEVSRRLDKMG---WRCSDTAELSFV 239 (403)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEECSSS-SGGGEEEEEEE-------TTCTTEEEEEECCBSS---CTTSCEEEEEEE
T ss_pred -----EEEEcccC-CccCCEEEEEEEcCCC-CCCceEEEEEe-------CCCCCeEecCcccccC---CCCCCceEEEEe
Confidence 99999999 9999999999998654 45689999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 016297 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (392)
Q Consensus 246 ~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~ 325 (392)
||+||.+++||. .+.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 240 ~v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~ 300 (403)
T 3r7k_A 240 DVRVPADNLVGA------ENSGFL------QIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGR-------PLT 300 (403)
T ss_dssp EEEEEGGGEESS------TTCHHH------HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGG
T ss_pred eEEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCC-------chh
Confidence 999999999984 444443 4567788899999999999999999999999999999999 999
Q ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 326 ~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+||.+||+|++|.+.++++|++++++++.++.. ......++++|.++++.+.++
T Consensus 301 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~------------~~~~~~~~~aK~~a~~~a~~v 354 (403)
T 3r7k_A 301 GRQIIRHKLAEMARQVDVACTYTRAVMQRWLAG------------EDVVAEVSMAKNTAVYACDYV 354 (403)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------CCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988752 122456899999999998875
No 10
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=7.3e-50 Score=392.30 Aligned_cols=308 Identities=21% Similarity=0.248 Sum_probs=259.2
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..++||.++++++++|+.++.. +. ....+....++..+|+.|.++|| |+++||.|.++...
T Consensus 5 ~~~~~~~~l~~~~r~~~~~~~~--~~-------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 75 (391)
T 2vig_A 5 ELPETHQMLLQTCRDFAEKELF--PI-------AAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAME 75 (391)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTT--TT-------HHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCc--cc-------HHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHH
Confidence 4578999999999999986531 10 11122223345678999999997 89999987554221
Q ss_pred -------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEec
Q 016297 96 -------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (392)
Q Consensus 96 -------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~ 166 (392)
+. .+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 76 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 152 (391)
T 2vig_A 76 EISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAE--GDSWVLN- 152 (391)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEe--CCEEEEe-
Confidence 11 23445446778889999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecc
Q 016297 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (392)
Q Consensus 167 p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~ 246 (392)
|+|.|||| +..||+++|+|+++.++++.|+++|+|| .+.|||++.+.|+++| ++++++++|.|+|
T Consensus 153 ----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~r~~~~~~v~fd~ 217 (391)
T 2vig_A 153 ----GTKAWITN-AWEASAAVVFASTDRALQNKSISAFLVP-------MPTPGLTLGKKEDKLG---IRGSSTANLIFED 217 (391)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECCSSSTTSCEEEEEEE-------SSCTTEEECCCCCBSS---CTTSCEEEEEEEE
T ss_pred ----eEEEeecC-CCcCCEEEEEEEeCCCCCCCceEEEEEe-------CCCCCeEecCcccccc---CCCCCeeEEEECc
Confidence 99999999 8999999999998644344589999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 016297 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (392)
Q Consensus 247 v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~ 326 (392)
|+||.+++||. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 218 v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~ 278 (391)
T 2vig_A 218 CRIPKDSILGE------PGMGFK------IAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGA-------PLTK 278 (391)
T ss_dssp EEEEGGGEESS------TTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred EEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------cchh
Confidence 99999999985 455443 4556778899999999999999999999999999999999 9999
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 327 ~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||.+||+|++|.+.++++|++++++++.++.. . .....++++|.++++.+.++
T Consensus 279 ~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g-------~-----~~~~~~~~aK~~a~~~a~~~ 331 (391)
T 2vig_A 279 LQVIQFKLADMALALESARLLTWRAAMLKDNK-------K-----PFIKEAAMAKLAASEAATAI 331 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C-----CCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------C-----CchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988642 1 13456899999999998875
No 11
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.3e-49 Score=389.71 Aligned_cols=308 Identities=21% Similarity=0.234 Sum_probs=260.1
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhc-------
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSV------- 93 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~------- 93 (392)
..++||.++++++++|+.++.... ....+....++.++|+.|.++|| |+++||.+.++.
T Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 79 (385)
T 2pg0_A 9 YLREEHHMFRAAFRKFLEKEAYPH---------YNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINE 79 (385)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCchh---------HHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHH
Confidence 457899999999999998664210 11122223345678999999997 899999775432
Q ss_pred -----C-CchHHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecC
Q 016297 94 -----D-EPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (392)
Q Consensus 94 -----~-~~~~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p 167 (392)
. .+.++.+|..+++..|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 80 ela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 155 (385)
T 2pg0_A 80 ELEKVGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKD--GDYYIVN-- 155 (385)
T ss_dssp HHHHHCGGGHHHHHHHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHHhhCCchHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEc--CCEEEEE--
Confidence 1 12233336557788889999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCcceeccCCCCCCCcEEEEEEEEccC--CCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEec
Q 016297 168 TLTSSKWWPGGLGKVSTHAVVYARLITD--GQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (392)
Q Consensus 168 ~~~G~K~~v~~~a~~Ad~~~V~A~~~~~--~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~ 245 (392)
|+|.|||+ +..||+++|+|+++++ +++.++++|+|| .+.|||++.+.|+++| ++++++++|.|+
T Consensus 156 ---G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v~fd 221 (385)
T 2pg0_A 156 ---GQKTFITN-GIHADLIVVACKTDPQAKPPHRGISLLVVE-------RDTPGFTRGRKLEKVG---LHAQDTAELFFQ 221 (385)
T ss_dssp ---EEEEEETT-TTTCSEEEEEEESCTTCSSGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCCEEEEEE
T ss_pred ---eEEecccC-CcccCEEEEEEEeCCccCCCCCceEEEEEe-------CCCCCeEecCCccccc---cCCCceEEEEEc
Confidence 99999999 9999999999998643 244589999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 016297 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (392)
Q Consensus 246 ~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~ 325 (392)
||+||.+++||. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 222 ~v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~ 282 (385)
T 2pg0_A 222 DAKVPAYNLLGE------EGKGFY------YLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGK-------RVS 282 (385)
T ss_dssp EEEEEGGGEESC------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGG
T ss_pred ceEEcHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC-------ccc
Confidence 999999999985 354443 4556778899999999999999999999999999999999 999
Q ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 326 ~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+||.+||+|++|.+.++++|++++++++.++.. .+....++++|.++++.+.++
T Consensus 283 ~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g------------~~~~~~~~~aK~~a~e~a~~~ 336 (385)
T 2pg0_A 283 EFQTVQFRLAEMATEIALGRTFVDRVIEEHMAG------------KQIVTEVSMAKWWITEMAKRV 336 (385)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988642 123567899999999998875
No 12
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=9.9e-50 Score=408.89 Aligned_cols=319 Identities=21% Similarity=0.265 Sum_probs=263.0
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..++||.+|++++++|+.++.. +. .++.......++..+|+.+.++|| |+++||.|.+....
T Consensus 32 ~lt~eq~~l~~~vr~f~~~~~~--p~------~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~E 103 (597)
T 3owa_A 32 DFSSEHKMIAKTTEDFIVNEVL--PE------LEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAE 103 (597)
T ss_dssp GCCHHHHHHHHHHHHHHHHHTG--GG------HHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCc--hh------HHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 4578999999999999997642 10 011111112456789999999998 89999988654221
Q ss_pred --------chHHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecC
Q 016297 96 --------PAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (392)
Q Consensus 96 --------~~~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p 167 (392)
..++..|..++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++++|++|+||
T Consensus 104 el~~~~~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLn-- 181 (597)
T 3owa_A 104 KFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLN-- 181 (597)
T ss_dssp HHGGGTHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEE--
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEe--
Confidence 1224455556666788899999999999999999999999999999999999999999997667789999
Q ss_pred CCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecce
Q 016297 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (392)
Q Consensus 168 ~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~v 247 (392)
|+|.|||| +..||+++|+|++++ .|+++|+|| .+.|||++.+.|+++| ++++++++|.|+||
T Consensus 182 ---G~K~~is~-a~~Ad~~lV~Art~~----~g~s~flV~-------~~~pGv~v~~~~~~~G---lrgs~t~~v~fddV 243 (597)
T 3owa_A 182 ---GEKQWITN-SAFADVFIVYAKIDG----EHFSAFIVE-------KDYAGVSTSPEEKKMG---IKCSSTRTLILEDA 243 (597)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETT----TEEEEEEEE-------TTSTTEEECCCCCBSS---CTTSCEEEEEEEEE
T ss_pred ---eEEEEeCC-CccCCEEEEEEEeCC----CceEEEEEe-------CCCCCeEEeccccccc---CCCCCceEEEEece
Confidence 99999999 899999999999852 379999999 7889999999999999 99999999999999
Q ss_pred ecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccch
Q 016297 248 RIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 327 (392)
Q Consensus 248 ~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~~ 327 (392)
+||.+++||. .|.++. ..+..+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 244 ~VP~~~lLG~------~g~G~~------~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~-------pi~~~ 304 (597)
T 3owa_A 244 LVPKENLLGE------IGKGHI------IAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQ-------PIARF 304 (597)
T ss_dssp EEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred eecHHHhcCc------ccchHH------HHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------ccccc
Confidence 9999999985 455443 5667788999999999999999999999999999999999 99999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-------CchhHHHHHhhHHHHhHHHHhhh
Q 016297 328 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFS-------TLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 328 q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~-------~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|.+||+|++|.+.++++|++++++++.+|+........... ...+....++++|.++++.+.++
T Consensus 305 q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~aK~~ase~a~~v 375 (597)
T 3owa_A 305 PLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYT 375 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998754210000000 00134567899999999998865
No 13
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=3.5e-49 Score=404.73 Aligned_cols=315 Identities=20% Similarity=0.238 Sum_probs=261.6
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
+.++||.++++++++|+.++.. +. .++.......++..+|+.+.++|| |+++||.|.+....
T Consensus 27 ~~~~e~~~l~~~~~~~~~~~~~------p~--~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~e 98 (577)
T 2z1q_A 27 DFDESVKEIARTTRTFVEREVL------PL--LERMEHGELELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAE 98 (577)
T ss_dssp GCCHHHHHHHHHHHHHHHTTTH------HH--HHHHHTTCGGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhccCc------hh--HHhhhcccCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHH
Confidence 3478999999999999997541 00 111110111345689999999998 89999987553211
Q ss_pred --------chHHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecC
Q 016297 96 --------PAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (392)
Q Consensus 96 --------~~~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p 167 (392)
+..+..|.+++..+|..+|+++||++|||++++|++++|+++|||++|||+..++|+|+++++|++|+||
T Consensus 99 el~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLn-- 176 (577)
T 2z1q_A 99 ELSGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILN-- 176 (577)
T ss_dssp HHTTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEE--
T ss_pred HHhhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEE--
Confidence 1224456556667788999999999999999999999999999999999999999999996657799999
Q ss_pred CCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecce
Q 016297 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (392)
Q Consensus 168 ~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~v 247 (392)
|+|+|||| +..||+++|+|++++ .|+++|+|| .+.|||++.+.|+++| +++++++.|.|+||
T Consensus 177 ---G~K~~it~-a~~Ad~~~V~Ar~~g----~gis~flVp-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fddv 238 (577)
T 2z1q_A 177 ---GVKQWISN-AGFAHLFTVFAKVDG----EHFTAFLVE-------RDTPGLSFGPEEKKMG---IKASSTRQVILEDV 238 (577)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETT----TEEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEEEE
T ss_pred ---EEeeCCCC-CCccCEEEEEEEeCC----CeeEEEEEe-------CCCCCeEecCCCCCCC---CCCCceeEEEecce
Confidence 99999999 899999999999852 579999999 7899999999999999 99999999999999
Q ss_pred ecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccch
Q 016297 248 RIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 327 (392)
Q Consensus 248 ~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~~ 327 (392)
+||.+++||. .|.++. ..+..+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 239 ~VP~~~llg~------~g~g~~------~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~-------pi~~~ 299 (577)
T 2z1q_A 239 KVPVENVLGE------IGKGHK------IAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGR-------PIGRF 299 (577)
T ss_dssp EEEGGGEESC------TTCTHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSS-------BGGGS
T ss_pred eccHHHccCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------chhhh
Confidence 9999999984 455543 5567788899999999999999999999999999999999 99999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC------chhHHHHHhhHHHHhHHHHhhh
Q 016297 328 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFST------LPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 328 q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~------~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|.+||+|++|.+.++++|++++++++.+|.... +.... ..+.+..++++|+++++.+.++
T Consensus 300 q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~----~~~~~~~~~~~~~~~~~~~a~aK~~ase~a~~v 365 (577)
T 2z1q_A 300 GLIQQKLGEMASRIYAAESAVYRTVGLIDEALL----GKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYV 365 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCSHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc----ccccchhhhhcchhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999886531 00000 0234577899999999998875
No 14
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.9e-50 Score=392.83 Aligned_cols=308 Identities=19% Similarity=0.259 Sum_probs=258.4
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHH--HHHHHHHHcCC-----CHHHHHHHhhhcCC---
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAA--YAWKRIIELRL-----SEEEASMLRSSVDE--- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~l~~lG~-----~e~~gg~~~~~~~~--- 95 (392)
..++||.++++++++|+.++.... ....+....++. ++|+.|.++|| |+++||.|.+....
T Consensus 12 ~~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v 82 (394)
T 1ivh_A 12 GLSEEQRQLRQTMAKFLQEHLAPK---------AQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLV 82 (394)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCChh---------HHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHH
Confidence 457899999999999998654210 111222222334 78999999997 89999987553221
Q ss_pred ---------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEE
Q 016297 96 ---------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVI 164 (392)
Q Consensus 96 ---------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~L 164 (392)
+. .+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+|
T Consensus 83 ~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~l 160 (394)
T 1ivh_A 83 MEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKK--GNHYIL 160 (394)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEEC--SSEEEE
T ss_pred HHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEc--CCEEEE
Confidence 22 23444446788899999999999999999999999999999999999999999999987 889999
Q ss_pred ecCCCCcceeccCCCCCCCcEEEEEEEEccC--CCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeE
Q 016297 165 HSPTLTSSKWWPGGLGKVSTHAVVYARLITD--GQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVL 242 (392)
Q Consensus 165 n~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~--~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v 242 (392)
| |+|.|||| +..||+++|+|+++.+ ++..|+++|+|| .+.|||++.+.|+++| ++++++++|
T Consensus 161 n-----G~K~~vs~-~~~Ad~~~v~ar~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v 224 (394)
T 1ivh_A 161 N-----GNKFWITN-GPDADVLIVYAKTDLAAVPASRGITAFIVE-------KGMPGFSTSKKLDKLG---MRGSNTCEL 224 (394)
T ss_dssp E-----EEEEEEET-GGGCSEEEEEEESCTTCSSGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEE
T ss_pred E-----eEEEeeCC-CCcCCEEEEEEEeCCcccCCCCCeEEEEEe-------CCCCCeEecccccccc---CCCCCeeEE
Confidence 9 99999999 9999999999998644 234689999999 7889999999999999 999999999
Q ss_pred EecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCc
Q 016297 243 RFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPET 322 (392)
Q Consensus 243 ~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~ 322 (392)
.|+||+||.+++||. .+.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 225 ~fd~v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~------- 285 (394)
T 1ivh_A 225 IFEDCKIPAANILGH------ENKGVY------VLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQ------- 285 (394)
T ss_dssp EEEEEEEEGGGEESC------TTCHHH------HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTE-------
T ss_pred EECcEEEcHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------
Confidence 999999999999985 344443 4566777899999999999999999999999999999999
Q ss_pred cccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 323 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 323 ~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||++||.+||+|++|.+.++++|++++++++.++.. . .....++++|.++++.+.++
T Consensus 286 ~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g-------~-----~~~~~~~~aK~~a~~~a~~~ 342 (394)
T 1ivh_A 286 KIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEG-------H-----CTAKDCAGVILYSAECATQV 342 (394)
T ss_dssp EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C-----CCHHHHHHHHHHHHHHHHHH
T ss_pred chhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------C-----cchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988642 1 12356889999999998875
No 15
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1e-49 Score=388.71 Aligned_cols=302 Identities=21% Similarity=0.216 Sum_probs=255.6
Q ss_pred CChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC------
Q 016297 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE------ 95 (392)
Q Consensus 27 ~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~------ 95 (392)
.++||.++++++++|+.++.. + .....+....++.++|+.|.++|| |+++||.+.++...
T Consensus 3 ~~~e~~~l~~~~r~~~~~~~~------~---~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 73 (372)
T 2dvl_A 3 LTQEQRLVLDAVRRVAREVLY------P---LAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEE 73 (372)
T ss_dssp CCHHHHHHHHHHHHHHHHTHH------H---HHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCc------h---hHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHH
Confidence 468999999999999986531 0 011122222345678999999987 89999987554221
Q ss_pred ------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecC
Q 016297 96 ------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (392)
Q Consensus 96 ------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p 167 (392)
+. .+.+|..+++..|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 149 (372)
T 2dvl_A 74 LAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRV--KGGFVLN-- 149 (372)
T ss_dssp HHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEE--CCEEEEE--
Confidence 22 23344346677888999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecce
Q 016297 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (392)
Q Consensus 168 ~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~v 247 (392)
|+|.|||| +..||+++|+|++++ |+++|+|| .+.|||++.+.|+++| ++++++++|.|+||
T Consensus 150 ---G~K~~~s~-~~~Ad~~~v~a~~~~-----g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd~v 210 (372)
T 2dvl_A 150 ---GVKSWITS-AGHAHLYVVMARTEK-----GISAFLVE-------KGTPGLSFGRPEEKMG---LHAAHTAEVRLEEV 210 (372)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETT-----EEEEEEEE-------TTCTTEEECCCCCCSS---CTTSCEEEEEEEEE
T ss_pred ---eEEEeecC-CCcCCEEEEEEEeCC-----CcEEEEEe-------CCCCCeEecCcccccc---cCcCCeeEEEECcE
Confidence 99999999 999999999999742 68999999 7899999999999999 99999999999999
Q ss_pred ecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccch
Q 016297 248 RIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 327 (392)
Q Consensus 248 ~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~~ 327 (392)
+||.+++||. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 211 ~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~~ 271 (372)
T 2dvl_A 211 FVPEENLLGE------EGRGLA------YALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGK-------KLKEH 271 (372)
T ss_dssp EEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred EeCHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC-------chhhh
Confidence 9999999984 344443 4566778899999999999999999999999999999999 99999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 328 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 328 q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|.+||+|++|.+.++++|++++++++.++.. ......++++|.++++.+.++
T Consensus 272 q~vq~~la~~~~~~~aar~~~~~aa~~~~~g------------~~~~~~~~~aK~~a~~~a~~~ 323 (372)
T 2dvl_A 272 QAIAFKIADMHVKIAAARALVLEAARKKDRG------------ERFTLEASAAKLFASAAAVEV 323 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987632 123457899999999998875
No 16
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1.3e-49 Score=391.09 Aligned_cols=308 Identities=21% Similarity=0.279 Sum_probs=257.9
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..++||.++++++++|+.++.. + .....+....++..+|+.|.++|| |+++||.+.++...
T Consensus 15 ~~~~~~~~l~~~~r~~~~~~~~------~---~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 85 (396)
T 1egd_A 15 EFTEQQKEFQATARKFAREEII------P---VAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISE 85 (396)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTH------H---HHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCc------h---hHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHH
Confidence 5579999999999999986531 0 011122222345678999999997 89999987553221
Q ss_pred -------chHHH-hhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecC
Q 016297 96 -------PAFTD-LHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (392)
Q Consensus 96 -------~~~~~-~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p 167 (392)
+.++. .|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 86 el~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 161 (396)
T 1egd_A 86 ELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKK--GDEYIIN-- 161 (396)
T ss_dssp HHHHHCHHHHHHHHHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEEC--SSEEEEE--
T ss_pred HHHhhCccHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEe--CCEEEEE--
Confidence 22222 45555666788899999999999999999999999999999999999999999987 8899999
Q ss_pred CCCcceeccCCCCCCCcEEEEEEEEccCCCC---CceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEe
Q 016297 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQD---HGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRF 244 (392)
Q Consensus 168 ~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~---~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f 244 (392)
|+|.|||| +..||+++|+|+++.+++. .++++|+|| .+.|||++.+.|+++| ++++++++|.|
T Consensus 162 ---G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~f 227 (396)
T 1egd_A 162 ---GQKMWITN-GGKANWYFLLARSDPDPKAPANKAFTGFIVE-------ADTPGIQIGRKELNMG---QRCSDTRGIVF 227 (396)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEECCCCTTSCGGGTEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEE
T ss_pred ---EEEEcccC-CcccCEEEEEEEeCCCCCCCCCCCeEEEEEe-------CCCCCeeeCCcccccc---ccCCCeeEEEE
Confidence 99999999 8999999999998654333 689999999 7889999999999999 99999999999
Q ss_pred cceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccc
Q 016297 245 EHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQV 324 (392)
Q Consensus 245 ~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i 324 (392)
+||+||.+++||. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||
T Consensus 228 d~v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i 288 (396)
T 1egd_A 228 EDVKVPKENVLIG------DGAGFK------VAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGK-------LL 288 (396)
T ss_dssp EEEEEEGGGBSSS------TTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTE-------EG
T ss_pred CcEEECHHHcCCC------CCccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCc-------ch
Confidence 9999999999984 455443 4556777899999999999999999999999999999999 99
Q ss_pred cchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 325 IDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 325 ~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
++||.+||+|++|.+.++++|++++++++.++.. ......++++|.++++.+.++
T Consensus 289 ~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g------------~~~~~~~~~aK~~a~~~a~~~ 343 (396)
T 1egd_A 289 VEHQAISFMLAEMAMKVELARMSYQRAAWEVDSG------------RRNTYYASIAKAFAGDIANQL 343 (396)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------SCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988642 122356889999999998875
No 17
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=6.7e-50 Score=393.18 Aligned_cols=307 Identities=21% Similarity=0.190 Sum_probs=253.0
Q ss_pred hcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC----
Q 016297 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE---- 95 (392)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~---- 95 (392)
+..++||.+|++++++|+.++.. + .....+....++.++|+.|.++|| |+++||.+.++...
T Consensus 17 ~~~~~e~~~l~~~~r~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~ 87 (396)
T 3ii9_A 17 QQLADDERMVRDAAHAYAQGKLA--P-------RVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIA 87 (396)
T ss_dssp GGSCHHHHHHHHHHHHHCCCCCH--H-------HHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCC--h-------hHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHH
Confidence 46679999999999999876641 0 111122233456689999999998 89999988654221
Q ss_pred --------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEe
Q 016297 96 --------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (392)
Q Consensus 96 --------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln 165 (392)
+. .+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 88 eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln 165 (396)
T 3ii9_A 88 REVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKV--PGGYSLS 165 (396)
T ss_dssp HHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEE--TTEEEEE
T ss_pred HHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEe--CCEEEEE
Confidence 21 23344445567788999999999999999999999999999999999999999999998 8999999
Q ss_pred cCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEec
Q 016297 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (392)
Q Consensus 166 ~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~ 245 (392)
|+|.|||+ +..||+++|+|+++.+ +..|+++|+|| .+.|||++.+.|+++| ++++++++|.|+
T Consensus 166 -----G~K~~vs~-a~~Ad~~~v~a~~~~~-g~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd 228 (396)
T 3ii9_A 166 -----GSKMWITN-SPIADVFVVWAKLDED-GRDEIRGFILE-------KGCKGLSAPAIHGKVG---LRASITGEIVLD 228 (396)
T ss_dssp -----EEEEEEET-GGGCSEEEEEEEEEET-TEEEEEEEEEE-------TTCTTEECCBCCCCSS---CTTSCEEEEEEE
T ss_pred -----EEEEeECC-CccCCEEEEEEEecCC-CCCceEEEEEe-------cCCCCeEecccccccc---CCcCCeeEEEEc
Confidence 99999999 9999999999998632 33579999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 016297 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (392)
Q Consensus 246 ~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~ 325 (392)
||+||.+++|+. +.++. ..+..+...|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 229 dv~Vp~~~~l~~-------~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~ 288 (396)
T 3ii9_A 229 EAFVPEENILPH-------VKGLR------GPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGR-------PLA 288 (396)
T ss_dssp EEEEEGGGBCTT-------CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGG
T ss_pred cEEECHHHccCC-------ChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCC-------chh
Confidence 999999999973 33332 4566778899999999999999999999999999999999 999
Q ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 326 ~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+||.+||+|++|.+.++++|++++++++.++.. ......++++|.++++.+.++
T Consensus 289 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~------------~~~~~~~~~aK~~a~~~a~~~ 342 (396)
T 3ii9_A 289 ANQLIQKKLADMQTEITLGLQGVLRLGRMKDEG------------TAAVEITSIMKRNSCGKALDI 342 (396)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988753 123456889999999988765
No 18
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2e-49 Score=389.40 Aligned_cols=307 Identities=20% Similarity=0.224 Sum_probs=258.3
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..++||.++++++++|+.++.. + .....+....++.++|+.|.++|| |+++||.|.+....
T Consensus 18 ~~~~e~~~~~~~~r~~~~~~~~------~---~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 88 (393)
T 1rx0_A 18 GLNEEQKEFQKVAFDFAAREMA------P---NMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFE 88 (393)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTH------H---HHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCC------c---cHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 4579999999999999987641 0 011222222345678999999998 89999987653221
Q ss_pred -------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEec
Q 016297 96 -------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (392)
Q Consensus 96 -------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~ 166 (392)
+. .+..| .++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 89 ela~~~~~~~~~~~~~-~~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln- 164 (393)
T 1rx0_A 89 ALATGCTSTTAYISIH-NMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQ--GDHYILN- 164 (393)
T ss_dssp HHHTTCHHHHHHHHHH-HHHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHHhCcchhHHHHHh-HHHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEc--CCEEEEE-
Confidence 11 22334 36677888999999999999999999999999999999999999999999988 8999999
Q ss_pred CCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecc
Q 016297 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (392)
Q Consensus 167 p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~ 246 (392)
|+|.|||| +..||+++|+|+++. ++.+|+++|+|| .+.|||++.+.++++| +++.++++|.|+|
T Consensus 165 ----G~K~~is~-a~~Ad~~~v~a~~~~-~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v~fd~ 228 (393)
T 1rx0_A 165 ----GSKAFISG-AGESDIYVVMCRTGG-PGPKGISCIVVE-------KGTPGLSFGKKEKKVG---WNSQPTRAVIFED 228 (393)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEESSS-SSGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEEE
T ss_pred ----eEEEeecC-CccCCEEEEEEEcCC-CCCCceEEEEEe-------CCCCCeEecCcccccc---cCCCCceEEEEcC
Confidence 99999999 999999999999753 234689999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 016297 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (392)
Q Consensus 247 v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~ 326 (392)
|+||.+++||. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 229 v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~ 289 (393)
T 1rx0_A 229 CAVPVANRIGS------EGQGFL------IAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGE-------PLAS 289 (393)
T ss_dssp EEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred eEeCHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------chhh
Confidence 99999999984 344443 4556677899999999999999999999999999999999 9999
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 327 ~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||.+||+|++|.++++++|++++++++.++.. . ++....++++|.++++.+.++
T Consensus 290 ~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~-------~----~~~~~~~~~aK~~a~~~a~~v 343 (393)
T 1rx0_A 290 NQYLQFTLADMATRLVAARLMVRNAAVALQEE-------R----KDAVALCSMAKLFATDECFAI 343 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C----TTHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------C----cchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988642 1 235667899999999998875
No 19
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=3.3e-49 Score=387.17 Aligned_cols=305 Identities=21% Similarity=0.201 Sum_probs=251.2
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..+++|.++++++++|+.++.... ....+....++.++|+.|.++|| |+++||.+.+....
T Consensus 15 ~~~~~~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~e 85 (387)
T 3nf4_A 15 LPSQEAAELIELTREIADKVLDPI---------VDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLE 85 (387)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhCCcc---------HHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHH
Confidence 457899999999999998664211 11122333456678999999998 89999987654221
Q ss_pred -------chH--HHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEec
Q 016297 96 -------PAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (392)
Q Consensus 96 -------~~~--~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~ 166 (392)
+.+ +..|. ++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 86 el~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln- 161 (387)
T 3nf4_A 86 EIAARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPT--DGGYVIN- 161 (387)
T ss_dssp HHHTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEe--CCEEEEE-
Confidence 222 33443 6677888999999999999999999999999999999999999999999988 8999999
Q ss_pred CCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecc
Q 016297 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (392)
Q Consensus 167 p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~ 246 (392)
|+|.|+|| +..||+++|+|+++ ++..++++|+|| .+.|||++.+.|+++| ++++++++|.|+|
T Consensus 162 ----G~K~~~s~-~~~Ad~~~v~a~~~--~~~~g~~~flV~-------~~~pGv~~~~~~~~~G---~~~~~~~~v~fd~ 224 (387)
T 3nf4_A 162 ----GSKSWITH-GGKADFYTLFARTG--EGSRGVSCFLVP-------ADQPGLSFGKPEEKMG---LHAVPTTSAFYDN 224 (387)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECC----CCCEEEEEEE-------TTCTTEEECCCCCBSS---CCSSCEEEEEEEE
T ss_pred ----eEEecccC-CcccCEEEEEEEeC--CCCCceEEEEEE-------CCCCCeEecCcccccc---cCCCCeeEEEEee
Confidence 99999999 89999999999986 234679999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 016297 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (392)
Q Consensus 247 v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~ 326 (392)
|+||++++||. .+.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 225 v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-------~i~~ 285 (387)
T 3nf4_A 225 ARIDADRRIGE------EGQGLQ------IAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGR-------KIID 285 (387)
T ss_dssp EEEEGGGEESS------TTCHHH------HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CTTT
T ss_pred EEecHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCC-------chhh
Confidence 99999999984 454443 4566778899999999999999999999999999999999 9999
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 327 ~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||.+||+|++|.+.++++|++++++++.++.. ......++++|.++++.+.++
T Consensus 286 ~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~------------~~~~~~~~~aK~~a~~~a~~~ 338 (387)
T 3nf4_A 286 HQGLGFLLADMAAAVATARATYLDAARRRDQG------------RPYSQQASIAKLTATDAAMKV 338 (387)
T ss_dssp C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------CCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888642 123456889999999998875
No 20
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=5.2e-49 Score=390.80 Aligned_cols=304 Identities=20% Similarity=0.250 Sum_probs=254.5
Q ss_pred hcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC----
Q 016297 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE---- 95 (392)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~---- 95 (392)
+..++||.++++++|+|++++.. +. ....+....++.++|+.|.++|| | ++||.|.++...
T Consensus 53 ~~l~~e~~~l~~~~r~f~~~~~~------p~---~~~~~~~~~~p~~~~~~l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~ 122 (436)
T 2ix5_A 53 DLLTPEEQAIRKKVRECMEKEVA------PI---MTEYWEKAEFPFHITPKLGAMGVAGGSIK-GYGCPGLSITANAIAT 122 (436)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTH------HH---HHHHHHHTCCCGGGHHHHHTTTCTTTTCC-STTCCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhhCC------hh---hHHHHhcCCCCHHHHHHHHHcCCCcCcCC-CCCCCCCCHHHHHHHH
Confidence 35679999999999999986641 00 01111122345678999999998 6 899887553221
Q ss_pred --------chH--HHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEe
Q 016297 96 --------PAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (392)
Q Consensus 96 --------~~~--~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln 165 (392)
+.+ +.+|..+++..|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 123 eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~--gdg~vLn 200 (436)
T 2ix5_A 123 AEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKV--EGGWKIN 200 (436)
T ss_dssp HHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE
T ss_pred HHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEe--CCEEEEe
Confidence 222 3446556778888999999999999999999999999999999999999999999998 8999999
Q ss_pred cCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEec
Q 016297 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (392)
Q Consensus 166 ~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~ 245 (392)
|+|.|||| +..||+++|+|+++.+ .++++|+|| .+.|||++.+.|+++| ++++++++|.|+
T Consensus 201 -----G~K~~is~-a~~Ad~~lv~Ar~~~~---~~~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~~v~fd 261 (436)
T 2ix5_A 201 -----GQKRWIGN-STFADLLIIFARNTTT---NQINGFIVK-------KDAPGLKATKIPNKIG---LRMVQNGDILLQ 261 (436)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEEETTT---SSEEEEEEE-------TTCTTEEEEECCCBSS---STTSCEEEEEEE
T ss_pred -----eeccCCCC-CcccCEEEEEEEECCC---CcEEEEEEE-------CCCCCeEeeccccccC---CCcCCceeEEec
Confidence 99999999 9999999999998532 368999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 016297 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (392)
Q Consensus 246 ~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~ 325 (392)
||+||++++|+. . .++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 262 dv~VP~~~~lg~------~-~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~-------pi~ 321 (436)
T 2ix5_A 262 NVFVPDEDRLPG------V-NSFQ------DTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGA-------PLA 321 (436)
T ss_dssp EEEEEGGGBCTT------C-SSHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGG
T ss_pred cEEECHHHcCCc------c-ccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------chh
Confidence 999999999974 1 1222 4556778899999999999999999999999999999999 999
Q ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 326 ~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+||.+||+|++|.+.++++|++++++++.++.. . .....++++|+++++.+.++
T Consensus 322 ~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g-------~-----~~~~~as~aK~~a~e~a~~v 375 (436)
T 2ix5_A 322 AFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETG-------Q-----MTPGQASLGKAWISSKARET 375 (436)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C-----CCHHHHHHHHHHHHHHHHHH
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------C-----CchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988642 1 12345789999999998875
No 21
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.6e-48 Score=385.68 Aligned_cols=311 Identities=18% Similarity=0.236 Sum_probs=256.9
Q ss_pred hcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH------------------HHHHHHHHHHHHcCC-----
Q 016297 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTL------------------RKAAYAWKRIIELRL----- 81 (392)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~w~~l~~lG~----- 81 (392)
+..++||.++++++|+|+.++.. +. ....+... .+..++|+.+.++||
T Consensus 7 ~~~~~~~~~l~~~~r~~~~~~~~------p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~ 77 (415)
T 4hr3_A 7 FAPSARAAELIAAVREFIDAEVM------PV---ERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFL 77 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTHH------HH---HHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHhCC------cc---HHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCC
Confidence 35679999999999999997731 00 11111111 145788999999997
Q ss_pred CHHHHHHHhhhcCC-------------chHHHhh--HhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCC-CCCC
Q 016297 82 SEEEASMLRSSVDE-------------PAFTDLH--WGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELG-HGSN 145 (392)
Q Consensus 82 ~e~~gg~~~~~~~~-------------~~~~~~~--~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~-~gsd 145 (392)
|+++||.|.++... +.++..+ ...+...|..+|+++||++|||++++|+.++|+++|||+ +|||
T Consensus 78 P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd 157 (415)
T 4hr3_A 78 PDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSD 157 (415)
T ss_dssp CCTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTS
T ss_pred CHHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCc
Confidence 89999988654221 1111111 112236788999999999999999999999999999999 9999
Q ss_pred cCCCceEEEEeCCCCeEEEecCCCCcceeccCCCCCC--CcEEEEEEEEccCC-CCCceEEEEEeeccCCCCCCCCCeEE
Q 016297 146 VQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV--STHAVVYARLITDG-QDHGVNGFIVQLRSLEDHSPLPGITI 222 (392)
Q Consensus 146 ~~~~~t~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~--Ad~~~V~A~~~~~~-~~~g~~~flV~~~~~~~~~~~~Gv~i 222 (392)
+..++|+|+++ +|+|+|| |+|.|||| +.+ ||+++|+|+++++. +..++++|+|| .+.|||++
T Consensus 158 ~~~~~t~A~~~--g~g~~ln-----G~K~~is~-a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~-------~~~pGv~v 222 (415)
T 4hr3_A 158 ATNMAATAVVE--GDEVVIN-----GRKWWSTG-VGHPDCKVIIFMGLTDPNAHRYARHSMVLVP-------MDTPGITV 222 (415)
T ss_dssp GGGCCCEEEEE--TTEEEEE-----EEEEEEET-TTSTTEEEEEEEEECCTTSCTTSSEEEEEEE-------TTSTTEEE
T ss_pred hhhCeeEEEEE--CCEEEEe-----eEEeeECC-CCCCCCCEEEEEEEeCCCCCCCCceEEEEEE-------cCCCceEe
Confidence 99999999998 8999999 99999999 866 99999999986542 34689999999 78899999
Q ss_pred eccCCcccCCccCCCC--ceeEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHH
Q 016297 223 GDIGMKFGNGAYNTMD--NGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAV 300 (392)
Q Consensus 223 ~~~~~~~G~~~~~~~~--~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al 300 (392)
.+.|+++| +++++ +++|.|+||+||++++||. .+.++. .....+..+|+.+++.++|++++++
T Consensus 223 ~~~~~~~g---~r~~~~~~~~v~fddv~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al 287 (415)
T 4hr3_A 223 ERMLPTMG---FYDEPGGHGVVSFDNVRLPADAFIAG------PGKGFE------IAQGRLGPGRVHHAMRLIGLAEVAL 287 (415)
T ss_dssp EEECCBTT---BCCTTTCEEEEEEEEEEEEGGGBSSC------TTCHHH------HHHHHCSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccc---cCCCCCCeeEEEEccEEECHHHcCCC------CCchHH------HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999999 99887 9999999999999999985 454443 4566777899999999999999999
Q ss_pred HHHHHHhhhhcccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhH
Q 016297 301 CIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGL 380 (392)
Q Consensus 301 ~~a~~y~~~R~qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~a 380 (392)
+.+++|+++|+|||+ ||++||.+||+|++|.+.++++|++++++++.+++.. .......++++
T Consensus 288 ~~a~~~a~~R~~fg~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~----------~~~~~~~~~~a 350 (415)
T 4hr3_A 288 EHACRRGLDRTAFGK-------PLVNLGGNRERIADARIAINQTRLLVLHAAWLLDTVG----------IMGALSAVSEI 350 (415)
T ss_dssp HHHHHHHHHCEETTE-------EGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----------GGGCHHHHHHH
T ss_pred HHHHHHHhcCccCCC-------cHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCchHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999887521 02345678899
Q ss_pred HHHhHHHHhhh
Q 016297 381 KSLTTTATAVC 391 (392)
Q Consensus 381 K~~~~~~a~~~ 391 (392)
|.++++++.++
T Consensus 351 K~~a~e~a~~v 361 (415)
T 4hr3_A 351 KVAAPNMAQQV 361 (415)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 22
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-48 Score=383.10 Aligned_cols=303 Identities=21% Similarity=0.240 Sum_probs=250.6
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----- 95 (392)
..++||.++++++++|+.++.. + .....+....++..+|+.|.++|| |+++||.|.++...
T Consensus 10 ~~~~~~~~l~~~~r~~~~~~~~--~-------~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 80 (385)
T 2eba_A 10 LLTPEEKEVQKAARRFLEKEAL--P-------HIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICY 80 (385)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTH--H-------HHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCC--c-------cHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHH
Confidence 4578999999999999986531 0 011111112234578999999997 89999987654221
Q ss_pred -------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCc-CCCceEEEEeCCCCeEEEe
Q 016297 96 -------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNV-QGLETTATFDPQTDEFVIH 165 (392)
Q Consensus 96 -------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~-~~~~t~a~~~~~~~~~~Ln 165 (392)
+. .+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+ ..++|+|+++ +|+|+||
T Consensus 81 ela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~--~~g~~ln 158 (385)
T 2eba_A 81 ELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARRE--GDTWVLN 158 (385)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC----CEEEEE
T ss_pred HHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEe--CCEEEEE
Confidence 22 2345555667788899999999999999999999999999999999999 9999999987 8899999
Q ss_pred cCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEec
Q 016297 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (392)
Q Consensus 166 ~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~ 245 (392)
|+|.|||| +..||+++|+|+++ ++ + +++|+|| .+.|||++.+.|+++| ++++++++|.|+
T Consensus 159 -----G~K~~~s~-~~~Ad~~~v~a~~~-~g--~-~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~f~ 218 (385)
T 2eba_A 159 -----GTKMWITN-GNLAHLAVIWAKDE-GG--E-VLGFLVP-------TDTPGFQAREVKRKMS---LRASVTSELVLE 218 (385)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEECC-------EEEEEEE-------TTSTTEEEEECCSBSS---SCSSCEEEEEEE
T ss_pred -----eeeeccCC-CcccCEEEEEEEeC-CC--c-EEEEEEe-------CCCCCeEecccccccc---cccCceeEEEEc
Confidence 99999999 99999999999975 22 2 8999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 016297 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (392)
Q Consensus 246 ~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~ 325 (392)
||+||++++| . .+.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 219 ~v~Vp~~~~l-~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~ 278 (385)
T 2eba_A 219 EVRVPESLRL-P------KALGLK------APLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGE-------PLA 278 (385)
T ss_dssp EEEEEGGGBC-T------TCCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSS-------BGG
T ss_pred cEEEcHHHcc-C------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCe-------eHH
Confidence 9999999999 3 233332 4456677899999999999999999999999999999999 999
Q ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 326 ~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+||.+||+|++|.+.++++|++++++++.++.. . .....++++|.++++.+.++
T Consensus 279 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g-------~-----~~~~~~~~aK~~a~~~a~~v 332 (385)
T 2eba_A 279 KKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEG-------K-----LTPAQVSLAKRQNVWKALQA 332 (385)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C-----CCHHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------C-----CchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988642 1 12356789999999998865
No 23
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=9.2e-49 Score=385.45 Aligned_cols=317 Identities=19% Similarity=0.241 Sum_probs=263.2
Q ss_pred hccCCCCHHHH-HHHhcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC----HHH
Q 016297 11 RKKAQFDVDEM-KIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLS----EEE 85 (392)
Q Consensus 11 r~~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~~----e~~ 85 (392)
.++..++...+ ...+..++||.++++++++|+.++.. + .....+....++.++|+.|.++||. +++
T Consensus 9 ~~~~~~~~~~~~~m~~~l~~e~~~l~~~~r~~~~~~~~------~---~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~e~ 79 (399)
T 3swo_A 9 SKKSTYAPLELFDTDRLLDQDERDIAATVRQFVDTRLK------P---NVEGWFESATLPSELAKEFGNLGVLGMHLQGY 79 (399)
T ss_dssp --CCCCCHHHHHTGGGGSCHHHHHHHHHHHHHHHHHTH------H---HHHHHHHHTCCCTTHHHHHHHHTCTTTTSCST
T ss_pred CcCccccccccccCCCCCCHHHHHHHHHHHHHHHHhCC------h---hHHHHHhhCCCCHHHHHHHHHCCCCcCChhhh
Confidence 34555665554 33456789999999999999997541 0 0111222223456789999998873 788
Q ss_pred HHHHhhhcCC------------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCce
Q 016297 86 ASMLRSSVDE------------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLET 151 (392)
Q Consensus 86 gg~~~~~~~~------------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t 151 (392)
||.|.++... +. .+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+.+++|
T Consensus 80 GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t 159 (399)
T 3swo_A 80 GCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRT 159 (399)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceE
Confidence 9887654221 22 234555567888999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCeEEEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccC
Q 016297 152 TATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGN 231 (392)
Q Consensus 152 ~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~ 231 (392)
+|+++ +|+|+|| |+|.|+|+ +..||+++|+|+++ .|+++|+|| .+.|||++.+.|+++|
T Consensus 160 ~A~~~--~~g~~ln-----G~K~~vs~-a~~Ad~~~v~a~~~-----~g~~~flV~-------~~~pGv~v~~~~~~~G- 218 (399)
T 3swo_A 160 RARRD--GSDWILN-----GTKMWITN-GNLADVATVWAQTD-----DGIRGFLVP-------TDTPGFTANEIHRKLS- 218 (399)
T ss_dssp EEEEE--TTEEEEE-----EEEEEEET-TTTCSEEEEEEBCT-----TSCEEEEEE-------TTSTTEEEEECCCBSS-
T ss_pred EEEEe--CCEEEEE-----EEEEeECC-CCccCEEEEEEEeC-----CceEEEEEe-------CCCCCeEeecCcCccc-
Confidence 99998 8999999 99999999 99999999999974 368999999 7889999999999999
Q ss_pred CccCCCCceeEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 016297 232 GAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR 311 (392)
Q Consensus 232 ~~~~~~~~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~ 311 (392)
++++++++|.|+||+||++++||. +.++. .....+..+|+.+++.++|+++++++.+++|+++|+
T Consensus 219 --~r~~~~~~v~fd~v~Vp~~~~lg~-------~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~ 283 (399)
T 3swo_A 219 --LRASVTSELVLDNVRLPASAQLPL-------AEGLS------APLSCLNEARFGIVFGALGAARDSLETTIAYTQSRE 283 (399)
T ss_dssp --CCSSCEEEEEEEEEEECGGGBCTT-------CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred --CCCCceeEEEEccEEEcHHHcCCC-------ChhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCe
Confidence 999999999999999999999983 33332 456778889999999999999999999999999999
Q ss_pred ccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 312 QFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 312 qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|||+ ||++||.+||+|++|.+.++++|++++++++.++.. ......++++|.++++.+.++
T Consensus 284 ~fG~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~------------~~~~~~~~~aK~~a~~~a~~v 344 (399)
T 3swo_A 284 VFDK-------PLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAE------------GVRPEQISLGKLNNVREAIAI 344 (399)
T ss_dssp ETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred eCCc-------chhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCchHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999999988652 123456889999999998875
No 24
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.1e-48 Score=383.33 Aligned_cols=303 Identities=22% Similarity=0.230 Sum_probs=257.4
Q ss_pred hcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHH-HHHHHHHHHcCCC----HHHHHHHhhhcCC----
Q 016297 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKA-AYAWKRIIELRLS----EEEASMLRSSVDE---- 95 (392)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~l~~lG~~----e~~gg~~~~~~~~---- 95 (392)
+..++||.++++++++|+.++.... ....+....++ .++|+.|.++||. +++||.|.++...
T Consensus 28 ~~l~~e~~~l~~~~r~~~~~~~~~~---------~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~~~~v~ 98 (403)
T 3sf6_A 28 AVLSAEEREIRDTVRSVVQRRIKPH---------IASWYEDGELPARELAVELGELGLLGMHLKGYGCAGMSAVAYGLAC 98 (403)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCHHHHHHHHHHTTCSSTTSCSTTCCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcChh---------HHHHHhcCCCCHHHHHHHHHHCCCCcccchhhCCCCCCHHHHHHHH
Confidence 3567999999999999999764210 11122222345 7899999999973 7889887653221
Q ss_pred --------c--hHHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEe
Q 016297 96 --------P--AFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (392)
Q Consensus 96 --------~--~~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln 165 (392)
+ ..+.+|..+++..|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 99 eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln 176 (403)
T 3sf6_A 99 LELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRS--GDDWILT 176 (403)
T ss_dssp HHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE
T ss_pred HHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEE--CCEEEEE
Confidence 2 123456556788899999999999999999999999999999999999999999999998 8999999
Q ss_pred cCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEec
Q 016297 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (392)
Q Consensus 166 ~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~ 245 (392)
|+|.|||| +..||+++|+|+++ .|+++|+|| .+.|||++.+.|+++| ++++++++|.|+
T Consensus 177 -----G~K~~is~-a~~Ad~~~v~ar~~-----~g~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~~v~fd 235 (403)
T 3sf6_A 177 -----GTKMWITN-GSVADVAVVWARTD-----EGIRGFVVP-------TDTPGFTANTIKSKMS---LRASVTSELVLD 235 (403)
T ss_dssp -----EEEEEEET-GGGCSEEEEEEEET-----TEEEEEEEE-------TTSTTEEEEECCSCSS---CTTSCEEEEEEE
T ss_pred -----EEEEeecC-CcccCEEEEEEEeC-----CceEEEEEE-------CCCCCeEecCCCCccC---CCCCceeEEEEc
Confidence 99999999 99999999999974 368999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 016297 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (392)
Q Consensus 246 ~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~ 325 (392)
||+||++++||. +.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 236 ~v~Vp~~~~lg~-------~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------pi~ 295 (403)
T 3sf6_A 236 GVRLPDSARLPG-------ATSLG------APLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDR-------PIG 295 (403)
T ss_dssp EEEEEGGGBCTT-------CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGG
T ss_pred cEEEcHHHccCC-------ChhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC-------cch
Confidence 999999999973 33332 4567788899999999999999999999999999999999 999
Q ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 326 ~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+||.+||+|++|.+.++++|++++++++.++.. ......++++|.++++.+.++
T Consensus 296 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~------------~~~~~~~~~aK~~a~~~a~~v 349 (403)
T 3sf6_A 296 GFQLTQQKLADMTLEYGKGFLLALHLGRQKDAG------------ELAPEQVSLGKLNNVREAIEI 349 (403)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988753 123456889999999998875
No 25
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=1.1e-48 Score=384.80 Aligned_cols=307 Identities=19% Similarity=0.259 Sum_probs=259.3
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHH-HHHHHHHHHcCC-----CHHHHHHHh--hhcCC--
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKA-AYAWKRIIELRL-----SEEEASMLR--SSVDE-- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~l~~lG~-----~e~~gg~~~--~~~~~-- 95 (392)
..++||.++++++++|+.++.. + .....+....++ .++|+.|.++|| |+++||.+. +....
T Consensus 4 ~~~~~~~~l~~~~r~~~~~~~~--~-------~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~ 74 (397)
T 3mpi_A 4 NLSKELQMLQKEVRNFVNKKIV--P-------FADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMI 74 (397)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTT--T-------THHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCC--h-------hHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHH
Confidence 5579999999999999997642 1 011222223345 678999999998 899999887 54321
Q ss_pred ----------ch--HHHhhHhhhHH-HHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeE
Q 016297 96 ----------PA--FTDLHWGMFVP-AIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEF 162 (392)
Q Consensus 96 ----------~~--~~~~~~~l~~~-~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~ 162 (392)
+. .+.+| .++.. .|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ +|+|
T Consensus 75 v~eela~~~~~~~~~~~~~-~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~ 151 (397)
T 3mpi_A 75 VTEEIARGSSALRVQLNME-VLGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDK--GDHW 151 (397)
T ss_dssp HHHHHHHHCHHHHHHHHHH-TTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEEC--SSEE
T ss_pred HHHHHHhhCchHHHHHHHH-HHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEe--CCEE
Confidence 22 23334 35556 888999999999999999999999999999999999999999999988 8899
Q ss_pred EEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEE-eeccCCCCCCCCCeEEeccCCcccCCccCCCCcee
Q 016297 163 VIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIV-QLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGV 241 (392)
Q Consensus 163 ~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV-~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~ 241 (392)
+|| |+|.|+|| +..||+++|+|+++.+++..|+++|+| | .+.|||++ +.|+++| ++++++++
T Consensus 152 ~ln-----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~~-------~~~~Gv~v-~~~~~~G---~~~~~~~~ 214 (397)
T 3mpi_A 152 LLN-----GSKTWISN-AAQADVLIYYAYTDKAAGSRGLSAFVIEP-------RNFPGIKT-SNLEKLG---SHASPTGE 214 (397)
T ss_dssp EEE-----EEEEEEET-TTTCSSEEEEEESCGGGGGGSEEEEEECT-------TTSTTEEE-EECCCSS---CTTSCEEE
T ss_pred EEE-----EEEEeeCC-CcccCEEEEEEEcCCCCCCCceEEEEEEc-------CCCCCeEe-ccCcccc---CcCCceeE
Confidence 999 99999999 999999999999865444568999999 8 78899999 8899999 99999999
Q ss_pred EEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCC
Q 016297 242 LRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPE 321 (392)
Q Consensus 242 v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~ 321 (392)
|.|+||+||++++||. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 215 v~fddv~Vp~~~~lg~------~~~g~~------~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~------ 276 (397)
T 3mpi_A 215 LFLDNVKVPKENILGK------PGDGAR------IVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGK------ 276 (397)
T ss_dssp EEEEEEEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE------
T ss_pred EEEeeEEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC------
Confidence 9999999999999985 454443 4566788899999999999999999999999999999999
Q ss_pred ccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 322 TQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 322 ~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||++||.+|++|++|.+.++++|++++++++.++.. . .+....++++|.++++.+.++
T Consensus 277 -~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~-------~----~~~~~~~~~aK~~a~~~a~~~ 334 (397)
T 3mpi_A 277 -PIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEG-------R----LNNGLDVAMAKYAAGEAVSKC 334 (397)
T ss_dssp -EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C----TEEHHHHHHHHHHHHHHHHHH
T ss_pred -chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------C----CccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988652 0 233567889999999998775
No 26
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-47 Score=378.07 Aligned_cols=321 Identities=17% Similarity=0.189 Sum_probs=249.8
Q ss_pred CCHHHHHHHhcCChhhHHHHHHHHHHHHcCC-CCCCCccccCCHHHHHH-HH-----HHHHHHHHHHHHHcCC-----CH
Q 016297 16 FDVDEMKIVWAGSRHAFQVSDRIARLVASDP-AFRKDNRAMLSRKELFK-NT-----LRKAAYAWKRIIELRL-----SE 83 (392)
Q Consensus 16 ~~~~~~~~~~~~~~e~~~l~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~-~~-----~~~~~~~w~~l~~lG~-----~e 83 (392)
++...|.+ ..++||.++++++++|++++. +..... .. .++..+ .. ......+|+.+.++|| |+
T Consensus 14 ~~~~~m~~--~~~~e~~~l~~~~r~f~~~~~~p~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~ 88 (428)
T 2wbi_A 14 IDTTGQLF--VQTRKGQEVLIKVKHFMKQHILPAEKEV-TE--FYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPA 88 (428)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHTHHHHHHHH-HC------------CCSCCHHHHHHHHHHHHTTCCSTTCHH
T ss_pred CCCccCCC--CCCHHHHHHHHHHHHHHHhhCCchhcch-hH--HhhhccccccccCCcccHHHHHHHHHHCCCCeecCCC
Confidence 45556765 567999999999999999773 110000 00 000000 00 0245678999999998 45
Q ss_pred HHHHHHhhhcCC-------------chHHHhhH--hhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCC-CCCCcC
Q 016297 84 EEASMLRSSVDE-------------PAFTDLHW--GMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELG-HGSNVQ 147 (392)
Q Consensus 84 ~~gg~~~~~~~~-------------~~~~~~~~--~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~-~gsd~~ 147 (392)
|.|.+.... +.++..+. .++...|..+|+++||++|||++++|+.++|+++|||+ +|||+.
T Consensus 89 ---G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~ 165 (428)
T 2wbi_A 89 ---VSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDAT 165 (428)
T ss_dssp ---HHCCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGG
T ss_pred ---CCCCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcc
Confidence 444332110 11222221 23456788899999999999999999999999999999 999999
Q ss_pred CCceEEEEeCCCCeEEEecCCCCcceeccCCCCCC--CcEEEEEEEEccCC--CCCceEEEEEeeccCCCCCCCCCeEEe
Q 016297 148 GLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV--STHAVVYARLITDG--QDHGVNGFIVQLRSLEDHSPLPGITIG 223 (392)
Q Consensus 148 ~~~t~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~--Ad~~~V~A~~~~~~--~~~g~~~flV~~~~~~~~~~~~Gv~i~ 223 (392)
.++|+|+++ +|+|+|| |+|+|||| +.+ ||+++|+|++++++ +..|+++|+|| .+.|||++.
T Consensus 166 ~~~t~A~~~--~~g~~ln-----G~K~~is~-a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~-------~~~pGv~v~ 230 (428)
T 2wbi_A 166 NIECSIQRD--EDSYVIN-----GKKWWSSG-AGNPKCKIAIVLGRTQNTSLSRHKQHSMILVP-------MNTPGVKII 230 (428)
T ss_dssp GCCCEEEEE--TTEEEEE-----EEEEEEET-TTSTTEEEEEEEEECCCTTSCGGGCEEEEEEE-------TTSTTEEEE
T ss_pred cceEEEEEe--CCEEEEE-----eEEeccCC-CCCCcCCEEEEEEEeCCccCCCCCceEEEEEE-------CCCCcEEec
Confidence 999999988 8999999 99999999 877 99999999986432 34579999999 788999999
Q ss_pred ccCCcccCCccCCCC---ceeEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHH
Q 016297 224 DIGMKFGNGAYNTMD---NGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAV 300 (392)
Q Consensus 224 ~~~~~~G~~~~~~~~---~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al 300 (392)
+.|+++| +++++ +++|.|+||+||.+++||. .|.++. .....+..+|+.+++.++|++++++
T Consensus 231 ~~~~~~G---~~~~~~~~~~~v~fddv~VP~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al 295 (428)
T 2wbi_A 231 RPLSVFG---YTDNFHGGHFEIHFNQVRVPATNLILG------EGRGFE------ISQGRLGPGRIHHCMRTVGLAERAL 295 (428)
T ss_dssp EECCBTT---BCCGGGCCEEEEEEEEEEEEGGGBCSC------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccc---cCCCCCCCeEEEEeCceEECHHHhcCC------ccchHH------HHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999 99885 8999999999999999985 344443 4456677899999999999999999
Q ss_pred HHHHHHhhhhcccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhH
Q 016297 301 CIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGL 380 (392)
Q Consensus 301 ~~a~~y~~~R~qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~a 380 (392)
+.+++|+++|+|||+ ||++||.+||+|++|.++++++|++++++++.++.... .+....++++
T Consensus 296 ~~a~~ya~~R~~fG~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g~----------~~~~~~~~~a 358 (428)
T 2wbi_A 296 QIMCERATQRIAFKK-------KLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGS----------AGAKKEIAMI 358 (428)
T ss_dssp HHHHHHHHHCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHTHHHHHHH
T ss_pred HHHHHHHhhCcccCC-------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----------cchHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999876210 2345678999
Q ss_pred HHHhHHHHhhh
Q 016297 381 KSLTTTATAVC 391 (392)
Q Consensus 381 K~~~~~~a~~~ 391 (392)
|+++++.+.++
T Consensus 359 K~~a~e~a~~v 369 (428)
T 2wbi_A 359 KVAAPRAVSKI 369 (428)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 27
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=9.6e-48 Score=374.01 Aligned_cols=271 Identities=17% Similarity=0.198 Sum_probs=230.6
Q ss_pred HHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC------------chH--HHhhHhhhHHHHhcCCCHHHHHhhhhHhh
Q 016297 67 RKAAYAWKRIIELRL-----SEEEASMLRSSVDE------------PAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAY 127 (392)
Q Consensus 67 ~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~------------~~~--~~~~~~l~~~~i~~~g~~eq~~~~l~~l~ 127 (392)
.++.++|+.|.++|| |+++||.+.++... +.+ +.+|..+++..|. +|+++||++|||+++
T Consensus 24 ~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~ 102 (366)
T 1r2j_A 24 ELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLKELT 102 (366)
T ss_dssp CCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHh
Confidence 345678999999997 89999987554221 222 3344446677888 999999999999999
Q ss_pred ccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEe
Q 016297 128 KMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQ 207 (392)
Q Consensus 128 ~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~ 207 (392)
+|+ ++|+++|||++|||+..++|+|+++ +|+|+|| |+|.|||+ +..||+++|+|++++ .++++|+||
T Consensus 103 ~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-----G~K~~~s~-~~~Ad~~~v~a~~~~----~g~~~flV~ 169 (366)
T 1r2j_A 103 SGK-LAAVGFSERQAGSDLSAMRTRVRLD--GDTAVVD-----GHKVWTTA-AAYADHLVVFGLQED----GSGAVVVVP 169 (366)
T ss_dssp CC--CEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-----EEEEEETT-TTTCSEEEEEEBCSS----SCCEEEEEE
T ss_pred CCC-eeEEEeCCCCCCCchhhCEeEEEEe--CCEEEEE-----EEEecccC-CcccCEEEEEEEeCC----CceEEEEEE
Confidence 999 9999999999999999999999998 8999999 99999999 999999999998753 178999999
Q ss_pred eccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecceecCcccccccccccCCCCeEEecCchhhHH-HhHHHHHHH
Q 016297 208 LRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLL-YGTMVYVRQ 286 (392)
Q Consensus 208 ~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~-~~~l~~~r~ 286 (392)
.+.|||++.+.|+++| ++++++++|.|+||+||.+++||. .+.++. .. ...+..+|+
T Consensus 170 -------~~~~Gv~~~~~~~~~G---~r~~~~~~v~f~~v~Vp~~~~lg~------~~~g~~------~~~~~~l~~~r~ 227 (366)
T 1r2j_A 170 -------ADTPGVRVERVPKPSG---CRAAGHADLHLDQVRVPAGAVLAG------SGASLP------MLVAASLAYGRK 227 (366)
T ss_dssp -------TTSTTEEEEECSSCSS---STTSCCEEEEEEEEEEEGGGBCTT------TTSCTT------TTTHHHHHHHHH
T ss_pred -------CCCCCeEecCCcCCcc---CCCCCeeEEEEeeEEEcHHHcCCC------CCccHH------HHHHHHhhHHHH
Confidence 7889999999999999 999999999999999999999984 344443 34 456778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 016297 287 TIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQAND 366 (392)
Q Consensus 287 ~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~ 366 (392)
.+++.++|+++++++.+++|+++|+|||+ ||++||.+||+|++|.++++++|++++++++.+++..
T Consensus 228 ~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~------- 293 (366)
T 1r2j_A 228 SVAWGCVGILRACRTAAVAHARTREQFGR-------PLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGS------- 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccCCC-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------
Confidence 99999999999999999999999999999 9999999999999999999999999999999886531
Q ss_pred CCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 367 FSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 367 ~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
.+....++++|.++++.+.++
T Consensus 294 ----~~~~~~~~~aK~~a~~~a~~~ 314 (366)
T 1r2j_A 294 ----PEMVPATILAKHVAAERAAAG 314 (366)
T ss_dssp ------CHHHHHHHHHHHHHHHHHH
T ss_pred ----CcchHHHHHHHHHHHHHHHHH
Confidence 123356899999999998875
No 28
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=2.1e-47 Score=392.64 Aligned_cols=307 Identities=18% Similarity=0.219 Sum_probs=255.6
Q ss_pred ChhhH----HHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC---
Q 016297 28 SRHAF----QVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE--- 95 (392)
Q Consensus 28 ~~e~~----~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~--- 95 (392)
++++. ++++++++|+.+... ....+....++.+.|+.+.++|| |+++||.|.+....
T Consensus 47 ~~~~~~~~~~l~~~~~~~~~~~~~-----------~~~~d~~~~~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v 115 (607)
T 2uxw_A 47 NEEQTQFLKELVEPVSRFFEEVND-----------PAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARL 115 (607)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-----------HHHHHHHTSCCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcC-----------HHHhccccCCCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHH
Confidence 45554 488999999997641 01112222344678999999998 89999987553221
Q ss_pred -----------chHHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEE
Q 016297 96 -----------PAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVI 164 (392)
Q Consensus 96 -----------~~~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~L 164 (392)
+..+..|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++++|++|+|
T Consensus 116 ~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~L 195 (607)
T 2uxw_A 116 VEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTL 195 (607)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEE
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 112334444556788889999999999999999999999999999999999999999998755668999
Q ss_pred ecCCCCcceeccCCCCCCCcEEEEEEEEccCC---C--CCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCc
Q 016297 165 HSPTLTSSKWWPGGLGKVSTHAVVYARLITDG---Q--DHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDN 239 (392)
Q Consensus 165 n~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~---~--~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~ 239 (392)
| |+|+|||+ +..||+++|+|++...+ + .+|+++|+|| .+.|||++.+.|+++| ++++++
T Consensus 196 n-----G~K~~is~-~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp-------~~~~Gv~v~~~~~~~G---~rg~~t 259 (607)
T 2uxw_A 196 N-----GSKLWISN-GGLADIFTVFAKTPVTDPATGAVKEKITAFVVE-------RGFGGITHGPPEKKMG---IKASNT 259 (607)
T ss_dssp E-----EEEEEEET-TTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEE-------GGGSSEEECCCCCCSS---CTTSCE
T ss_pred E-----eEEEeecC-CcccCEEEEEEEecCCCcccCCCCCceEEEEEe-------CCCCCeEEecCccccC---CCCCCe
Confidence 9 99999999 89999999999986321 1 3589999999 6789999999999999 999999
Q ss_pred eeEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016297 240 GVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGG 319 (392)
Q Consensus 240 ~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~ 319 (392)
++|.|+||+||.+++||. .|.++. .++..+..+|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 260 ~~v~fddv~VP~~~llG~------~g~G~~------~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~---- 323 (607)
T 2uxw_A 260 AEVFFDGVRVPSENVLGE------VGSGFK------VAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGE---- 323 (607)
T ss_dssp EEEEEEEEEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE----
T ss_pred eEEEeccEEecHHHhcCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC----
Confidence 999999999999999985 455554 5667788899999999999999999999999999999999
Q ss_pred CCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 320 PETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 320 ~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||++||.+|++|++|.+.+++++++++++++.+|.. . ++....++++|+++++.+.++
T Consensus 324 ---pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~-------~----~~~~~~~~~aK~~~se~a~~v 381 (607)
T 2uxw_A 324 ---KIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG-------A----TDFQIEAAISKIFGSEAAWKV 381 (607)
T ss_dssp ---EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C----SCCHHHHHHHHHHHHHHHHHH
T ss_pred ---chhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------C----ccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887641 1 234567899999999998875
No 29
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=3.4e-47 Score=373.47 Aligned_cols=306 Identities=20% Similarity=0.214 Sum_probs=252.1
Q ss_pred hcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHhhhcCC-----
Q 016297 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLS----EEEASMLRSSVDE----- 95 (392)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~~----e~~gg~~~~~~~~----- 95 (392)
+..++||.++++++++|+.++.. +. ....+....++..+|+.|.++||. +++||.|.+....
T Consensus 12 ~~~~~e~~~l~~~~r~~~~~~~~------~~---~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~~~GG~g~~~~~~~~~~e 82 (392)
T 1siq_A 12 EQLTTDEILIRDTFRTYCQERLM------PR---ILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLAR 82 (392)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTH------HH---HHHHHHHTCCCTHHHHHHHHTTCSSTTCEETTEECCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcC------cc---hHHHHhhCCCCHHHHHHHHhCCCCcccHHhhCCCCCCHHHHHHHHH
Confidence 35679999999999999986531 00 111111223456789999999973 7788877553221
Q ss_pred -------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEec
Q 016297 96 -------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (392)
Q Consensus 96 -------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~ 166 (392)
+. .+.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|++++++|+|+||
T Consensus 83 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~ln- 161 (392)
T 1siq_A 83 ELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLN- 161 (392)
T ss_dssp HHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEE-
T ss_pred HHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEE-
Confidence 11 22345445677888899999999999999999999999999999999999999999987546899999
Q ss_pred CCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecc
Q 016297 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (392)
Q Consensus 167 p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~ 246 (392)
|+|+|||| +..||+++|+|++++ .++++|+|| .+.|||++.+.|+++| ++++++++|.|+|
T Consensus 162 ----G~K~~vs~-~~~Ad~~~v~a~~~~----g~~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd~ 222 (392)
T 1siq_A 162 ----GTKTWITN-SPMADLFVVWARCED----GCIRGFLLE-------KGMRGLSAPRIQGKFS---LRASATGMIIMDG 222 (392)
T ss_dssp ----EEEEEEET-GGGCSEEEEEEEETT----SCEEEEEEE-------TTCTTEECCBCCCCSS---STTSCEEEEEEEE
T ss_pred ----EEEEeecC-CcccCEEEEEEEECC----CCEEEEEEe-------CCCCCeEecccccccc---ccCCceEEEEEcc
Confidence 99999999 899999999999852 248899999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 016297 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (392)
Q Consensus 247 v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~ 326 (392)
|+||.+++|+.. .++. ..+..+...|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 223 v~Vp~~~~lg~~-------~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~ 282 (392)
T 1siq_A 223 VEVPEENVLPGA-------SSLG------GPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGV-------PLAR 282 (392)
T ss_dssp EEEEGGGBCTTC-------CSSH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred EEECHHHcCCcc-------cCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCc-------chhh
Confidence 999999999741 1222 3456677889999999999999999999999999999999 9999
Q ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 327 ~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||.+||+|++|.+.++++|++++++++.++.. . .....++++|.++++.+.++
T Consensus 283 ~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~-------~-----~~~~~~~~aK~~~~~~a~~v 335 (392)
T 1siq_A 283 NQLIQKKLADMLTEITLGLHACLQLGRLKDQD-------K-----AAPEMVSLLKRNNCGKALDI 335 (392)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------C-----CCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------C-----cchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888642 1 12346789999999998765
No 30
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=2.5e-46 Score=372.52 Aligned_cols=321 Identities=15% Similarity=0.124 Sum_probs=251.8
Q ss_pred hcCChhhHHHHHHHHHHHHcCCCCCCCcc-ccCCHHHHHHHHHHHH--HHHHHHHHHcCC-----CHHHHHHHhhhcCC-
Q 016297 25 WAGSRHAFQVSDRIARLVASDPAFRKDNR-AMLSRKELFKNTLRKA--AYAWKRIIELRL-----SEEEASMLRSSVDE- 95 (392)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~w~~l~~lG~-----~e~~gg~~~~~~~~- 95 (392)
+..++||.+|++++|+|++++........ ...+... ..++ .++|+.|.++|| |+++||.|.++...
T Consensus 5 ~~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~ 79 (438)
T 3mkh_A 5 FHLSASQKGTYQAARSLARNLLMPARQTYLQHPPNSP-----LRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESA 79 (438)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTHHHHHHHHTTSCTTCH-----HHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCcHHHHHhhcccccc-----CcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHH
Confidence 35679999999999999998752100000 0000000 0233 678999999998 89999988654321
Q ss_pred -----------chHHH-hhHhhhHHHHhcCCCHHHHHhhhhHhhcc--ceeeEEeccCCCCCC-----CcCCCceEEEEe
Q 016297 96 -----------PAFTD-LHWGMFVPAIKGQGTDEQHQKWLPLAYKM--EIIGCYAQTELGHGS-----NVQGLETTATFD 156 (392)
Q Consensus 96 -----------~~~~~-~~~~l~~~~i~~~g~~eq~~~~l~~l~~G--~~~~~~a~tE~~~gs-----d~~~~~t~a~~~ 156 (392)
+..+. ....++...|..+|+++ |++|||++++| +.++|+++|||++|| |+..++|+|+++
T Consensus 80 ~v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~ 158 (438)
T 3mkh_A 80 ILVEECYSVEPSAALTIFATGLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLE 158 (438)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEE
T ss_pred HHHHHHHhhChhHHHHHHHhhHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEe
Confidence 11111 12235556678899999 88999999996 589999999999998 588999999998
Q ss_pred CCCCeEEEecCCCCcceeccCCCCC-----CCcEEEEEEEEcc------CCCCCceEEEEEeeccCCCCCCCCC-eEEec
Q 016297 157 PQTDEFVIHSPTLTSSKWWPGGLGK-----VSTHAVVYARLIT------DGQDHGVNGFIVQLRSLEDHSPLPG-ITIGD 224 (392)
Q Consensus 157 ~~~~~~~Ln~p~~~G~K~~v~~~a~-----~Ad~~~V~A~~~~------~~~~~g~~~flV~~~~~~~~~~~~G-v~i~~ 224 (392)
+|+|+|| |+|.|||| +. .||+++|+|++.. .++..++++|+||..+.+ ...|| |++.+
T Consensus 159 --g~g~~ln-----G~K~~is~-a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~--~~~pG~v~v~~ 228 (438)
T 3mkh_A 159 --GDEWVIN-----GEKMWATN-CAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLD--RNGEGSFEVLR 228 (438)
T ss_dssp --TTEEEEE-----EEECSCTT-TTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHH--HHCTTSEEEEE
T ss_pred --CCEEEEE-----eEEEEecC-CCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccc--cCCCCcEEecC
Confidence 8999999 99999999 76 7999999999853 122357999999932000 01388 99999
Q ss_pred cCCcccCCccCCCCceeEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016297 225 IGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIAT 304 (392)
Q Consensus 225 ~~~~~G~~~~~~~~~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~ 304 (392)
.|+++| ++++++++|.|+||+||++++||. .|.++. .+...+..+|+.+++.++|+++++++.++
T Consensus 229 ~~~~~G---~r~~~~~~v~fddv~VP~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~lG~a~~al~~a~ 293 (438)
T 3mkh_A 229 HVATPG---HTSVSGPHVRYTNVRVPTKNVLCP------AGQGAK------VAFGAFDGSAVLVGAMGVGLMRAAFDAAL 293 (438)
T ss_dssp CCCCSS---CTTCCCCEEEEEEEEEEGGGEEEC------TTTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcC---CcCCCceEEEECcEEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999999999999999999985 454443 55677888999999999999999999999
Q ss_pred HHhhhhcccC-CCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHH
Q 016297 305 RYSAVRRQFG-SKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSL 383 (392)
Q Consensus 305 ~y~~~R~qfG-~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~ 383 (392)
+|+++|+||| + ||++||.+||+|++|.++++++|++++++++.+++.. . ........++++|++
T Consensus 294 ~ya~~R~~~g~~-------pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~-------~-~~~~~~~~~~~aK~~ 358 (438)
T 3mkh_A 294 KFAKEDNRGGAV-------PLLERQAFADLLSGVKIQTEAARALTWKAAHAMENGP-------G-DYDARRELALAAKVF 358 (438)
T ss_dssp HHHHHCCTTCSS-------CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-------S-CHHHHHHHHHHHHHH
T ss_pred HHHhhcEeCCCe-------eccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------C-cchhHHHHHHHHHHH
Confidence 9999999999 8 9999999999999999999999999999999887531 1 112233457789999
Q ss_pred hHHHHhhh
Q 016297 384 TTTATAVC 391 (392)
Q Consensus 384 ~~~~a~~~ 391 (392)
+++.+.++
T Consensus 359 a~e~a~~~ 366 (438)
T 3mkh_A 359 CSEAAVKA 366 (438)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 31
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=3.2e-45 Score=364.54 Aligned_cols=315 Identities=15% Similarity=0.095 Sum_probs=250.1
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCcccc-CCHHHHHHHHHHHH--HHHHHHHHHcCC-----CHHHHHHHhhhcCC--
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAM-LSRKELFKNTLRKA--AYAWKRIIELRL-----SEEEASMLRSSVDE-- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~w~~l~~lG~-----~e~~gg~~~~~~~~-- 95 (392)
..++||.++++++++|+.++.......... ... ...++ ..+|+.|.++|| |+++||.|.++...
T Consensus 5 ~~~~e~~~l~~~~r~f~~~~~~p~~~~~d~~~~~------~~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~ 78 (439)
T 2c12_A 5 KLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQ------LSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESI 78 (439)
T ss_dssp CCCHHHHHHHHHHHHHHHHTGGGHHHHHTTCSSH------HHHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCChhHHHHhhcccc------cCCCCChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHH
Confidence 457899999999999999874211000000 000 11233 678999999998 79999987553211
Q ss_pred ----------ch--HHHhhHhhhHHHHhcCCCHHHHHhhhhHhh--ccceeeEEeccCCCCCC-----CcCCCceEEEEe
Q 016297 96 ----------PA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAY--KMEIIGCYAQTELGHGS-----NVQGLETTATFD 156 (392)
Q Consensus 96 ----------~~--~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~--~G~~~~~~a~tE~~~gs-----d~~~~~t~a~~~ 156 (392)
+. .+..| .++...|..+|+++||++|||+++ +|+.++|+++|||++|| |+..++|+|+++
T Consensus 79 v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~ 157 (439)
T 2c12_A 79 ILEELFAVEPATSITIVAT-ALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKV 157 (439)
T ss_dssp HHHHHHTTCCTTHHHHHHH-HHHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEE
T ss_pred HHHHHHhhChHHHHHHHHh-HHHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEc
Confidence 22 22334 355667889999999999999999 69999999999999998 578899999998
Q ss_pred CCCCeEEEecCCCCcceeccCCCCC-----CCcEEEEEEEE-c----cC----CCCCceEEEEEeeccCCCCCCCC----
Q 016297 157 PQTDEFVIHSPTLTSSKWWPGGLGK-----VSTHAVVYARL-I----TD----GQDHGVNGFIVQLRSLEDHSPLP---- 218 (392)
Q Consensus 157 ~~~~~~~Ln~p~~~G~K~~v~~~a~-----~Ad~~~V~A~~-~----~~----~~~~g~~~flV~~~~~~~~~~~~---- 218 (392)
+|+|+|| |+|.|||| +. .||+++|+|++ + ++ ++..++++|+|| .+.|
T Consensus 158 --~~g~~ln-----G~K~~is~-~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~-------~~~pGv~~ 222 (439)
T 2c12_A 158 --GNEWVIS-----GEKLWPSN-SGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVT-------RETIANNK 222 (439)
T ss_dssp --TTEEEEE-----EEEECCTT-TTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEEC-------HHHHHTSC
T ss_pred --CCEEEEE-----eEEEeecC-CCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEE-------CCCCcccC
Confidence 8999999 99999999 76 89999999998 5 22 234589999999 4556
Q ss_pred --CeEEeccCCcccCCccCCCCceeEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHH
Q 016297 219 --GITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCAL 296 (392)
Q Consensus 219 --Gv~i~~~~~~~G~~~~~~~~~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~ 296 (392)
||++.+.|+++| ++++++++|.|+||+||.+++||. .+.++.. .....+...|+.+++.++|++
T Consensus 223 ~~Gv~v~~~~~~~G---~r~~~~~~v~fddv~VP~~~~lg~------~~~g~~~-----~~~~~l~~~r~~~aa~~~G~a 288 (439)
T 2c12_A 223 KDAYQILGEPELAG---HITTSGPHTRFTEFHVPHENLLCT------PGLKAQG-----LVETAFAMSAALVGAMAIGTA 288 (439)
T ss_dssp GGGEEEEECCCBSS---CTTCCCCEEEEEEEEEEGGGBCSC------TTHHHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEeCCcccccc---cCCCCceEEEEccEEecHHHcCCC------CCccHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999 999999999999999999999984 3443310 234567789999999999999
Q ss_pred HHHHHHHHHHhhh-hcccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHH
Q 016297 297 SRAVCIATRYSAV-RRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHA 375 (392)
Q Consensus 297 ~~al~~a~~y~~~-R~qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~ 375 (392)
+++++.+++|+++ |++||+ ||++||.+||+|++|.+.++++|++++++++.++.. .. .......
T Consensus 289 ~~al~~a~~ya~~rr~~~G~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~-------~~-~~~~~~~ 353 (439)
T 2c12_A 289 RAAFEEALVFAKSDTRGGSK-------HIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDE-------AL-EWKVKLE 353 (439)
T ss_dssp HHHHHHHHHHHHHCCTTSSS-------CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-------TS-CHHHHHH
T ss_pred HHHHHHHHHHHhhceeeCCe-------ehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------Cc-cchhhHH
Confidence 9999999999996 788999 999999999999999999999999999999887532 11 0011344
Q ss_pred HHhhHHHHhHHHHhhh
Q 016297 376 CTAGLKSLTTTATAVC 391 (392)
Q Consensus 376 ~~a~aK~~~~~~a~~~ 391 (392)
.++++|.++++.+.++
T Consensus 354 ~~~~aK~~a~~~a~~v 369 (439)
T 2c12_A 354 MAMQTKIYTTDVAVEC 369 (439)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6889999999999875
No 32
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=8.4e-43 Score=342.51 Aligned_cols=311 Identities=14% Similarity=0.033 Sum_probs=237.8
Q ss_pred cCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHH-hhhcCC----
Q 016297 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML-RSSVDE---- 95 (392)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~-~~~~~~---- 95 (392)
..++||.++++++++|+.+. .+ .....+....++.++|+.|.++|| |+++||.| .++.+.
T Consensus 8 ~lt~e~~~~~~~~r~~~~~~---~~-------~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~ 77 (395)
T 3mxl_A 8 PLTPAGRTVVDLLAGVIPRI---SA-------EAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATAL 77 (395)
T ss_dssp CCSHHHHHHHHHHTTTHHHH---HH-------HHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH---hh-------chHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHH
Confidence 55789999999999998731 11 122233333456788999999987 89999988 553221
Q ss_pred --------chH--HHhhHhhhHHHH--hcCCCHHHH---HhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCC
Q 016297 96 --------PAF--TDLHWGMFVPAI--KGQGTDEQH---QKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTD 160 (392)
Q Consensus 96 --------~~~--~~~~~~l~~~~i--~~~g~~eq~---~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~ 160 (392)
+.+ +.+|..++...+ ..+|+++|| ++|||++++|+.++|+++|||++|+ ..++|+ + +|
T Consensus 78 eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t~---~--~~ 150 (395)
T 3mxl_A 78 MRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHSD---G--AG 150 (395)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEEC---S--SS
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEEe---c--CC
Confidence 222 233433333333 356999999 9999999999999999999998652 233332 3 78
Q ss_pred eEEEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCce
Q 016297 161 EFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNG 240 (392)
Q Consensus 161 ~~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~ 240 (392)
+|+|| |+|+|||| +..||+++|+|+++++++..++++|+|| .+.|||++.+.|+++| +++++++
T Consensus 151 g~~ln-----G~K~~is~-a~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~ 214 (395)
T 3mxl_A 151 GWLLS-----GRKVLVSM-APIATHFFVHAQRRDDDGSVFLAVPVVH-------RDAPGLTVLDNWDGLG---MRASGTL 214 (395)
T ss_dssp CEEEE-----EEEEEETT-GGGCSEECCCEEEECTTSCEEEECCCEE-------TTCTTEEEECCCCBSS---CTTSCCE
T ss_pred EEEEe-----eEEEEecC-ccccCEEEEEEEeCCCCCCCceEEEEEE-------CCCCceEeCCCchhcC---CCCCCcc
Confidence 99999 99999999 9999999999998765555689999999 7889999999999999 9999999
Q ss_pred eEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCC
Q 016297 241 VLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGP 320 (392)
Q Consensus 241 ~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~ 320 (392)
+|.|+||+||++++||.. +.|.++. .....+..+|+.+++.++|+++++++.+++|++ |+
T Consensus 215 ~v~f~~v~Vp~~~~lg~~----~~g~g~~------~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r----- 274 (395)
T 3mxl_A 215 EVVFDRCPVRADELLERG----PVGARRD------AVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GR----- 274 (395)
T ss_dssp EEEEEEEEECGGGCCEEE----ESSCCCT------THHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TT-----
T ss_pred eEEEcceEcCHHHhcCCC----CCCccHH------HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CC-----
Confidence 999999999999999831 1233332 222334458889999999999999999999998 67
Q ss_pred CccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 321 ETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 321 ~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
||++||.+||+|++|.+.++++|++++++++.++....................++++|.++++.+.++
T Consensus 275 --~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~ 343 (395)
T 3mxl_A 275 --GGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMMTPFQYAKMTVNELAPAV 343 (395)
T ss_dssp --CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999998864322111100000123456788999999987765
No 33
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=4.1e-42 Score=342.16 Aligned_cols=318 Identities=12% Similarity=0.030 Sum_probs=238.2
Q ss_pred CHHHHHHHhcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHH-h
Q 016297 17 DVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML-R 90 (392)
Q Consensus 17 ~~~~~~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~-~ 90 (392)
+..+|.+ ..++||.++++++++|+.+.. + .....+....++.++|+.|.+.|| |+++||.+ .
T Consensus 12 ~~~~m~~--~lt~e~~~l~~~~r~~~~~~~---~-------~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~ 79 (439)
T 3m9v_A 12 STTGLYA--PVTPAGRVLLDRLAAHLPRIR---S-------TAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVD 79 (439)
T ss_dssp CCSTTSS--CSSHHHHHHHHHHHTTHHHHH---H-------HHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCC
T ss_pred CCCCCCC--CCCHHHHHHHHHHHHHHHHHh---h-------hHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCC
Confidence 4445655 667999999999999987421 0 122223333456688999999997 89999988 5
Q ss_pred hhcCC------------chH--HHhhHhhhHHHH--hcCCCHHH---HHhhhhHhhccceeeEEeccCCCCCCCcCCCce
Q 016297 91 SSVDE------------PAF--TDLHWGMFVPAI--KGQGTDEQ---HQKWLPLAYKMEIIGCYAQTELGHGSNVQGLET 151 (392)
Q Consensus 91 ~~~~~------------~~~--~~~~~~l~~~~i--~~~g~~eq---~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t 151 (392)
+.... +.+ +.+|...+...+ ..+|+++| |++||+++++|+.++|+++|||++ +...++|
T Consensus 80 ~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~--~~~~~~t 157 (439)
T 3m9v_A 80 RLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHT--AVTTLRP 157 (439)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTT--CCCEEEE
T ss_pred CHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCC--CCCceee
Confidence 43211 222 333433333332 35699999 899999999999999999999975 3333333
Q ss_pred EEEEeCCCCeEEEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccC
Q 016297 152 TATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGN 231 (392)
Q Consensus 152 ~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~ 231 (392)
+ + +|+|+|| |+|+|+|| +.+||+++|+|+++++++..++++|+|| .+.|||++.+.|+++|
T Consensus 158 ~---~--~~g~vln-----G~K~~~s~-a~~Ad~~~v~art~~~~~~~g~~~flVp-------~~~pGv~i~~~~~~~G- 218 (439)
T 3m9v_A 158 D---G--AGGWLLS-----GRKTLVSM-APVGTHFVINARTDGTDGPPRLASPVVT-------RDTPGFTVLDNWDGLG- 218 (439)
T ss_dssp C---S--SSCEEEE-----EEEEEETT-GGGCSEEEECEEECC--CCCCEEEEEEE-------TTCTTEEECCCCCCSS-
T ss_pred c---c--CCEEEEE-----eEEEeecC-ccccCEEEEEEEecCCCCCceeEEEEEE-------CCCCCeEECCCcccCC-
Confidence 2 3 7899999 99999999 9999999999999765555689999999 7889999999999999
Q ss_pred CccCCCCceeEEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 016297 232 GAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR 311 (392)
Q Consensus 232 ~~~~~~~~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~ 311 (392)
++++++++|.|+||+||.+++|+.. +.|.+.. .....+..+|+.+++.++|+++++++.+++|++
T Consensus 219 --~~~~~~~~v~fddv~VP~~~~lg~~----~~g~g~~------~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~--- 283 (439)
T 3m9v_A 219 --MRASGTVDIVFDDCPIPADHVLMRD----PVGARND------AVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE--- 283 (439)
T ss_dssp --CTTSCCEEEEEEEEEECGGGEEECC----C--CCCG------GGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH---
T ss_pred --cCCCCceeEEEeeeEcCHHHccCCC----CCCchHH------HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 9999999999999999999999831 1233332 122234458889999999999999999999998
Q ss_pred ccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 312 QFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 312 qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|+ ||++||.+|++|++|.++++++|++++++++.++....................++++|.++++.+.++
T Consensus 284 --~r-------~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~a~~~a~~v 354 (439)
T 3m9v_A 284 --RR-------PEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQCAKLAVNRLAPEI 354 (439)
T ss_dssp --TC-------SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 56 899999999999999999999999999999988764322110000000123456778899999977765
No 34
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=1.3e-41 Score=336.20 Aligned_cols=306 Identities=11% Similarity=-0.062 Sum_probs=232.5
Q ss_pred hcCChhhHHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC----
Q 016297 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE---- 95 (392)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~---- 95 (392)
+..++||.++++++++|+.+.. + .....+....++..+|+.|.++|| |+++||.|.++...
T Consensus 16 ~~~~~~~~~l~~~~r~~~~~~~---~-------~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ 85 (414)
T 2or0_A 16 NLYFQGMGRVLDRIEVVAEEIR---G-------QAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETV 85 (414)
T ss_dssp -------CHHHHHHHHTHHHHH---H-------HHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHH---H-------hHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHH
Confidence 4557899999999999997421 1 011122222345678999999987 89999987554221
Q ss_pred --------chH--HHhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEe
Q 016297 96 --------PAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (392)
Q Consensus 96 --------~~~--~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln 165 (392)
+.+ +..| .++...|..+|+++||++||| +|+.++|+++| | +|+|+++ +|+|+||
T Consensus 86 eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~--~~g~~ln 149 (414)
T 2or0_A 86 MGVAALDGASGWVTGIV-GVHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPV--DGGYVLK 149 (414)
T ss_dssp HHHHHHCHHHHHHHHHH-TTHHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEE--TTEEEEE
T ss_pred HHHHhhChHHHHHHHHH-HHHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEE--CCeEEEE
Confidence 222 2334 366778889999999999999 79999999988 4 5889988 8999999
Q ss_pred cCCCCcceeccCCCCCCCcEEEEEEEEccCCCCC---ceEEEEEeeccCCCCCCCCCeEEe-ccCCcccCCccCCCCcee
Q 016297 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDH---GVNGFIVQLRSLEDHSPLPGITIG-DIGMKFGNGAYNTMDNGV 241 (392)
Q Consensus 166 ~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~---g~~~flV~~~~~~~~~~~~Gv~i~-~~~~~~G~~~~~~~~~~~ 241 (392)
|+|.|||| +..||+++|+|+++.+.+.. ++++|+|| .+ ||++. +.|+++| ++++++++
T Consensus 150 -----G~K~~is~-a~~Ad~~~v~a~~~~~~g~~~~~g~~~flV~-------~~--gv~v~~~~~~~~G---~r~~~~~~ 211 (414)
T 2or0_A 150 -----GRWSFSSG-TDHCQWAFLGAMVGDGEGGIATPSSLHVILP-------RT--DYQIVEDTWDVIG---LRGTGSKD 211 (414)
T ss_dssp -----EEEEEETT-GGGCSEEEEEEEECC-----CCCSEEEEEEE-------GG--GCEEETTCCCBSS---CGGGCCEE
T ss_pred -----eeEeccCC-CchhhEEEEEEEecCCCCCcccceeEEEEEE-------hh--hcEEecCCCcccc---CcccCCCc
Confidence 99999999 99999999999986422223 79999999 33 89999 9999999 99999999
Q ss_pred EEecceecCcccccccccccCC--CC----eEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-C
Q 016297 242 LRFEHVRIPRNQMLMRVSQVTR--EG----KYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQF-G 314 (392)
Q Consensus 242 v~f~~v~Vp~~~ll~~~~~~~~--~g----~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qf-G 314 (392)
|.|+||+||.+++|+....... .| .+.. .....+...|+.+++.++|+++++++.+++|+++|+|| |
T Consensus 212 v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~------~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G 285 (414)
T 2or0_A 212 LIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPL------FNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITG 285 (414)
T ss_dssp EEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSG------GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTS
T ss_pred EEEccEEecHHHeeccccccccCCCccccCCCcc------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999974100000 01 1111 22344667899999999999999999999999999999 9
Q ss_pred CCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 315 SKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 315 ~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+ ||++||.+|++|++|.+.++++|++++++++.+++.... +.. ...+....++++|.++++.+.++
T Consensus 286 ~-------~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~---g~~-~~~~~~~~~~~aK~~a~e~a~~v 351 (414)
T 2or0_A 286 Q-------KIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDA---GKE-ITFEERAIGRRTQIAAAWRAVRA 351 (414)
T ss_dssp C-------BGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCC-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-------ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 9 999999999999999999999999999999998754311 111 11345677899999999999875
No 35
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=7.7e-40 Score=321.35 Aligned_cols=298 Identities=13% Similarity=0.019 Sum_probs=231.6
Q ss_pred HHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC------------
Q 016297 33 QVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE------------ 95 (392)
Q Consensus 33 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~------------ 95 (392)
++++++++|+.+.. +. ....+....++.++|+.|.++|| |+++||.+.++...
T Consensus 11 ~l~~~~~~~~~~~~---~~-------~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~ 80 (394)
T 2rfq_A 11 EVMQRLDALLPTLR---ER-------AQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACG 80 (394)
T ss_dssp HHHHHHHHHHHHHH---HT-------HHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHH---Hh-------HHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhCh
Confidence 68999999987321 10 11122222345678999999987 89999987554221
Q ss_pred chHH--HhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecCCCCcce
Q 016297 96 PAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSK 173 (392)
Q Consensus 96 ~~~~--~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p~~~G~K 173 (392)
+.++ ..| .++...|..+|+++||++|+| +|+.++|++++ | +|+|+++ +|+|+|| |+|
T Consensus 81 ~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~--~~g~~ln-----G~K 139 (394)
T 2rfq_A 81 STGWVSSII-GVHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVV--DGGYTVN-----GAW 139 (394)
T ss_dssp HHHHHHHHH-HHHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEE--TTEEEEE-----EEE
T ss_pred hHHHHHHHH-HHHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEe--CCeEEEe-----eeE
Confidence 2222 233 356778888999999999998 79989999988 4 5789988 8899999 999
Q ss_pred eccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecceecCccc
Q 016297 174 WWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQ 253 (392)
Q Consensus 174 ~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~v~Vp~~~ 253 (392)
.|||| +.+||+++|+|+++.++.++++++|+|| .+ ||++.+.|+++| ++++++++|.|+||+||.++
T Consensus 140 ~~is~-a~~Ad~~~v~a~~~~~g~~~~~~~flV~-------~~--gv~v~~~~~~~G---~~~~~~~~v~fd~v~Vp~~~ 206 (394)
T 2rfq_A 140 AWSSG-CDHASWAVLGGPVIKDGRPVDFVSFLIP-------RE--DYRIDDVWNVVG---LRGTGSNTVVVEDVFVPTHR 206 (394)
T ss_dssp EEETT-GGGCSEEEEEEEEEETTEEEEEEEEEEE-------GG--GCEEECCCCBSS---CGGGCCEEEEEEEEEEEGGG
T ss_pred eccCC-CcccceEEEeeeecCCCCCCceeEEEEE-------hh--hcEEeCCccccc---cccCCCCceEEcceEcChHH
Confidence 99999 9999999999998433333479999999 33 899999999999 99999999999999999999
Q ss_pred ccccccccCC--CC----eEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---ccCCCCCCCCccc
Q 016297 254 MLMRVSQVTR--EG----KYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR---QFGSKNGGPETQV 324 (392)
Q Consensus 254 ll~~~~~~~~--~g----~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~---qfG~~~~~~~~~i 324 (392)
+|+....... .| .+.. .....+...|+.+++.++|+++++++.+++|+++|+ |||+ ||
T Consensus 207 ~lg~~~~~~g~~~g~~~~~g~~------~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~-------~i 273 (394)
T 2rfq_A 207 VLSFKAMSNLTAPGLERNTAPV------YKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGE-------KA 273 (394)
T ss_dssp EEEHHHHHTTCCGGGTTCCCGG------GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTC-------GG
T ss_pred hcccccccccCCCCcccCCCcc------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCc-------cc
Confidence 9974210000 11 1111 223445678999999999999999999999999999 9999 99
Q ss_pred cchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 325 IDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 325 ~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
++||.+||+|++|.+.++++|++++++++.++..... +.. ...+....++++|.++++.+.++
T Consensus 274 ~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~---g~~-~~~~~~~~~~~aK~~a~~~a~~~ 336 (394)
T 2rfq_A 274 KDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVA---GEE-VPFELRLRARRDQVRATGRAISS 336 (394)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCC-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998754311 111 11345677899999999998875
No 36
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=3.2e-40 Score=326.92 Aligned_cols=299 Identities=12% Similarity=-0.007 Sum_probs=232.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHhhhcCC-----------
Q 016297 32 FQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVDE----------- 95 (392)
Q Consensus 32 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~lG~-----~e~~gg~~~~~~~~----------- 95 (392)
.++++++++|+.... +. ....+....++.++|+.|.++|| |+++||.|.++...
T Consensus 38 ~~l~~~~r~~~~~~~---~~-------a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~ 107 (422)
T 2jbr_A 38 VSMLEKIQQILPQIA---KN-------AESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGAC 107 (422)
T ss_dssp CCHHHHHHHHHHHHH---HT-------HHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH---Hh-------hHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhC
Confidence 358899999987311 10 11122222345678999999997 89999987654221
Q ss_pred -chHH--HhhHhhhHHHHhcCCCHHHHHhhhhHhhccceeeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecCCCCcc
Q 016297 96 -PAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSS 172 (392)
Q Consensus 96 -~~~~--~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p~~~G~ 172 (392)
+.++ ..| .++...|..+|+++||++|+|+ |+.++|++++ | +|+|+++ +|+|+|| |+
T Consensus 108 ~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~--~~g~~ln-----G~ 166 (422)
T 2jbr_A 108 AGTAWAFSLL-CTHSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEV--EGGIILN-----GD 166 (422)
T ss_dssp HHHHHHHHHH-HHHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEE--TTEEEEE-----EE
T ss_pred cCHHHHHHHH-HHHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEe--CCEEEEe-----ee
Confidence 2222 233 3667788899999999999996 8889999988 4 5789988 8899999 99
Q ss_pred eeccCCCCCCCcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecceecCcc
Q 016297 173 KWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRN 252 (392)
Q Consensus 173 K~~v~~~a~~Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~v~Vp~~ 252 (392)
|.|||| +..||+++|+|+++.+++..++++|+|| .+ ||++.+.|+++| ++++++++|.|+||+||++
T Consensus 167 K~~is~-a~~Ad~~~v~a~~~~~~g~~g~~~flV~-------~~--gv~v~~~~~~~G---~r~~~~~~v~fddv~VP~~ 233 (422)
T 2jbr_A 167 YGWSSG-CDHAEYAIVGFNRFDADGNKIYSFGVIP-------RS--DYEIVDNWYAQA---IKSSGSKMLKLVNVFIPEY 233 (422)
T ss_dssp EEEETT-GGGCSEEEEEEEEECTTSCEEEEEEEEE-------GG--GCEEECCCCBSS---SGGGCCEEEEEEEEEEEGG
T ss_pred EeeecC-CccccEEEEEEEecCCCCCceeEEEEEE-------cC--ceEEeCCccccC---cCCCCCCcEEEeeEEecHH
Confidence 999999 8999999999998643334589999999 33 899999999999 9999999999999999999
Q ss_pred cccccccccC--CCCeE-----EecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--ccCCCCCCCCcc
Q 016297 253 QMLMRVSQVT--REGKY-----VQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR--QFGSKNGGPETQ 323 (392)
Q Consensus 253 ~ll~~~~~~~--~~g~~-----~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~--qfG~~~~~~~~~ 323 (392)
++|+...... ..|.+ +. .....+..+|+.+++.++|+++++++.+++|+++|+ |||+ |
T Consensus 234 ~~lg~~~~~~g~~~g~g~~~~~~~------~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~-------~ 300 (422)
T 2jbr_A 234 RISKAKDMMEGKSAGFGLYPDSKI------FYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGA-------N 300 (422)
T ss_dssp GEEEHHHHHHTCSTTTTSCTTCSS------SSSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCC-------B
T ss_pred HeecccccccCCCCcccccCCCcc------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-------c
Confidence 9998531000 01222 11 223456678999999999999999999999999998 9999 9
Q ss_pred ccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 324 VIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 324 i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|++||.+||+|++|.+.++++|++++++++.++..... +.. ...+....++++|.++++.+.++
T Consensus 301 i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~---g~~-~~~~~~~~~~~aK~~a~e~a~~v 364 (422)
T 2jbr_A 301 VGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLN---HQY-PNKETLAFWRTNQAYAVKMCIEA 364 (422)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCC-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998754321 111 11345677899999999999875
No 37
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=3.9e-38 Score=319.21 Aligned_cols=274 Identities=15% Similarity=0.116 Sum_probs=224.9
Q ss_pred HHHHHHHHHcCC-------CHHHHHHHhhh----------cCCchHHHhhHhhhHHHHhcCCCHHHHHhhhhHhhccce-
Q 016297 70 AYAWKRIIELRL-------SEEEASMLRSS----------VDEPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEI- 131 (392)
Q Consensus 70 ~~~w~~l~~lG~-------~e~~gg~~~~~----------~~~~~~~~~~~~l~~~~i~~~g~~eq~~~~l~~l~~G~~- 131 (392)
.++++.+.+.|| |+++||.+... ....+|..++. .++..|..+| ++||++|||++++|+.
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~sge~~ 166 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLLSDRYD 166 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHHHHHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHTCSCCC
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHhCCCcc
Confidence 456777888886 35778765332 11244555555 4667788888 9999999999999998
Q ss_pred ------------eeEEeccCCCCCCCcCCCceEEEEeCCCCeEEEecCCCCcceeccCCCCCCCcEEEEEEEEccCCCCC
Q 016297 132 ------------IGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDH 199 (392)
Q Consensus 132 ------------~~~~a~tE~~~gsd~~~~~t~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~~~~~~~~~ 199 (392)
++|+++|||++|||+..++|+|++++ +|+|+|| |+|+|+| +..||+++|+|+++ .
T Consensus 167 p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~-~g~y~Ln-----G~K~f~S--a~~Ad~~lVlArt~-----~ 233 (541)
T 3djl_A 167 SHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLE-DGSYRLV-----GHKWFFS--VPQSDAHLVLAQTA-----G 233 (541)
T ss_dssp CCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECT-TSCEEEE-----EEEEEEE--CTTSSEEEEEEEET-----T
T ss_pred cccccccccccceeEEEeccCCcCCCcccceeEEEEcC-CCeEEEE-----EEEEeec--ccccCEEEEEEEEC-----C
Confidence 78999999999999999999999863 5789999 9999998 57999999999984 5
Q ss_pred ceEEEEEeeccCCCCCCCCCeEEeccCCcccCCccCCCCceeEEecceecCcccccccccccCCCCeEEecCchhhHHHh
Q 016297 200 GVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYG 279 (392)
Q Consensus 200 g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~~~~~~~~~v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~ 279 (392)
|+++|+||...++ ...+||++.+.|+++| ++++++++|.|+||+ +++||. .|.++. .+..
T Consensus 234 Gis~flVp~~~p~--~~~~Gv~i~~~~~~~G---~rgt~s~~v~fddv~---~~llG~------~g~G~~------~~~~ 293 (541)
T 3djl_A 234 GLSCFFVPRFLPD--GQRNAIRLERLKDKLG---NRSNASCEVEFQDAI---GWLLGL------EGEGIR------LILK 293 (541)
T ss_dssp EEEEEEEESBCTT--SCBCSEEEEEECCCSS---CTTSCEEEEEEEEEE---EEEESS------TTCHHH------HTHH
T ss_pred ceEEEEEecCCCC--CCcCCeEEeeccccCC---CcCCceeEEEEccce---eeeeec------CCchHH------HHHH
Confidence 7999999943211 1123999999999999 999999999999995 788884 455554 5567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016297 280 TMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVT 359 (392)
Q Consensus 280 ~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~ 359 (392)
.+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+++|.+|++|++|.+.+++++++++++++.++...
T Consensus 294 ~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~ 366 (541)
T 3djl_A 294 MGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGN-------PLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRA 366 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCC-------chhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 788899999999999999999999999999999999 9999999999999999999999999999999887531
Q ss_pred HhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 360 QRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+.......+..++++|+++++.+.++
T Consensus 367 ------~~~~~~~~~~~~~~aK~~ase~a~~~ 392 (541)
T 3djl_A 367 ------DAKEALWARLFTPAAKFVICKRGMPF 392 (541)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------ChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001235677899999999998775
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=99.97 E-value=4.6e-31 Score=264.35 Aligned_cols=235 Identities=12% Similarity=0.016 Sum_probs=174.5
Q ss_pred HHhcCCC--HHHHHhhhhHhhccceeeEEeccCCCCC--------CCc-CCCceEEEEeCCCCeEEEecCCCCcceeccC
Q 016297 109 AIKGQGT--DEQHQKWLPLAYKMEIIGCYAQTELGHG--------SNV-QGLETTATFDPQTDEFVIHSPTLTSSKWWPG 177 (392)
Q Consensus 109 ~i~~~g~--~eq~~~~l~~l~~G~~~~~~a~tE~~~g--------sd~-~~~~t~a~~~~~~~~~~Ln~p~~~G~K~~v~ 177 (392)
.+..+|+ ++||++|||++++|++++|+++|||+.| ||+ ..++ +++++ +|+|+|| |+|+|+|
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~--gdg~vln-----G~K~~iT 190 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKR--EDGIVVR-----GAKAHQT 190 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEEC--SSEEEEE-----EEECSCT
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEE--CCEEEEE-----eEEEEee
Confidence 4457999 9999999999999999999999999864 675 3444 78877 8999999 9999999
Q ss_pred CCCCCCcEEEEEEEEccC-CCCCceEEEEEeeccCCCCCCCCCeEEe---ccCCc----------ccCCcc-CC-CCcee
Q 016297 178 GLGKVSTHAVVYARLITD-GQDHGVNGFIVQLRSLEDHSPLPGITIG---DIGMK----------FGNGAY-NT-MDNGV 241 (392)
Q Consensus 178 ~~a~~Ad~~~V~A~~~~~-~~~~g~~~flV~~~~~~~~~~~~Gv~i~---~~~~~----------~G~~~~-~~-~~~~~ 241 (392)
| +..||+++|+++++.+ +...++++|+|| .+.|||++. +.+.+ +| + +. .+.+.
T Consensus 191 ~-a~~Ad~~iV~art~~~~~~~~~~s~flVp-------~d~pGv~v~~~r~~~~~~~~~~~~d~~lg---~~r~~~~~~~ 259 (490)
T 1u8v_A 191 G-SINSHEHIIMPTIAMTEADKDYAVSFACP-------SDADGLFMIYGRQSCDTRKMEEGADIDLG---NKQFGGQEAL 259 (490)
T ss_dssp T-CTTCSEEEECCSSCCCGGGGGGCEEEEEE-------TTCTTEEEEECCCTTGGGGGSTTCCGGGS---SSSCCCCCEE
T ss_pred C-CcccCEEEEEEecCCCCCCCCeEEEEEEE-------CCCCCEEEEecccccccccccccccCCcc---ccccCCceEE
Confidence 9 9999999999997532 222358899999 789999994 44443 55 5 53 56788
Q ss_pred EEecceecCcccccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCC
Q 016297 242 LRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPE 321 (392)
Q Consensus 242 v~f~~v~Vp~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~ 321 (392)
|.||||+||.+++|+.. +.+.++. .....+.+.|+.+++.++|.++.++..+..... .|
T Consensus 260 v~FddV~VP~e~vl~~g----~~~~g~~------~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~---~~-------- 318 (490)
T 1u8v_A 260 VVFDNVFIPNDRIFLCQ----EYDFAGM------MVERFAGYHRQSYGGCKVGVGDVVIGAAALAAD---YN-------- 318 (490)
T ss_dssp EEEEEEEEEGGGEEEES----CGGGHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH--------
T ss_pred EEECceEeCHHHccCCC----ChhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--------
Confidence 99999999999998310 1233222 233445567776666666666665555544332 12
Q ss_pred ccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 322 TQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 322 ~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+|++||.||++|++|.+.++++|++++.+++.++.. +..........++++|.++++++.++
T Consensus 319 -gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~-------~~g~~~~~~~~~s~aK~~a~e~a~~v 380 (490)
T 1u8v_A 319 -GAQKASHVKDKLIEMTHLNETLYCCGIACSAEGYPT-------AAGNYQIDLLLANVCKQNITRFPYEI 380 (490)
T ss_dssp -TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEC-------TTSCEECCHHHHHHHHHHHTTHHHHH
T ss_pred -CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHccccc-------ccCCcCccHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999866420 00000122456899999999998775
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=99.97 E-value=6.3e-31 Score=262.99 Aligned_cols=230 Identities=10% Similarity=0.102 Sum_probs=178.0
Q ss_pred CHHHHHhhhhHhhccceeeEEeccCCCCC--------CCcCCCceEEE-EeCCCCeEEEecCCCCcceeccCCCCCCCcE
Q 016297 115 TDEQHQKWLPLAYKMEIIGCYAQTELGHG--------SNVQGLETTAT-FDPQTDEFVIHSPTLTSSKWWPGGLGKVSTH 185 (392)
Q Consensus 115 ~~eq~~~~l~~l~~G~~~~~~a~tE~~~g--------sd~~~~~t~a~-~~~~~~~~~Ln~p~~~G~K~~v~~~a~~Ad~ 185 (392)
.+|||++|||++++|++++|+++|||+.| ||+. +.|+++ ++ ||+|+|| |+|+|+|| ..||+
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~--gdg~Vln-----G~K~~iT~--~~Ad~ 191 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQT--EKGIVVR-----GARMTATF--PLADE 191 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEEC--SSEEEEE-----EEEEEEEC--CCSSE
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEE--CCEEEEE-----eEEEEecc--ccccE
Confidence 47899999999999999999999999876 6664 667765 45 8999999 99999998 78999
Q ss_pred EEEEEEEccC-CCCCceEEEEEeeccCCCCCCCCCeEEe--ccCCc--------ccCCccCC-CCceeEEecceecCccc
Q 016297 186 AVVYARLITD-GQDHGVNGFIVQLRSLEDHSPLPGITIG--DIGMK--------FGNGAYNT-MDNGVLRFEHVRIPRNQ 253 (392)
Q Consensus 186 ~~V~A~~~~~-~~~~g~~~flV~~~~~~~~~~~~Gv~i~--~~~~~--------~G~~~~~~-~~~~~v~f~~v~Vp~~~ 253 (392)
++|+|+++.+ +...++++|+|| .+.|||++. +.+.+ +| ++. .++++|.||||+||.++
T Consensus 192 ~iV~art~~~~~~~~~~s~flVp-------~dtpGv~v~~r~~~~~~~s~~d~~lg---~r~~~~~~~v~FddV~VP~e~ 261 (481)
T 2yyk_A 192 VLIFPSILLQAGSEKYALAFALP-------TSTPGLHFVCREALVGGDSPFDHPLS---SRVEEMDCLVIFDDVLVPWER 261 (481)
T ss_dssp EEECCCSCCCTTCGGGCEEEEEE-------TTCTTEEEEECCCCCCCSCTTTCTTT---TTCCCCEEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCCCCCeEEEEEEE-------CCCCCEEEEeccccccCCcccccccc---ccCCCCeEEEEEccEEECHHH
Confidence 9999998632 223468999999 789999994 33332 45 553 67789999999999999
Q ss_pred ccccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHh
Q 016297 254 MLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNR 333 (392)
Q Consensus 254 ll~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~~q~vq~~ 333 (392)
+|+. + +.+.+... ......+..+|+..++..+|.++.++..+..|+.. . +|++||.||++
T Consensus 262 vl~~-G---~~~~g~~~----~~~~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~-----~-------gi~~~q~vq~~ 321 (481)
T 2yyk_A 262 VFIL-G---NVELCNNA----YGATGALNHMAHQVVALKTAKTEAFLGVAALMAEG-----I-------GADVYGHVQEK 321 (481)
T ss_dssp EEEE-S---CHHHHHHH----HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----T-------TGGGSHHHHHH
T ss_pred ccCC-C---CccHHHHH----HHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh-----c-------ChhhhHHHHHH
Confidence 9831 0 12222110 01145667889999999999999999999988863 3 68899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 334 LFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 334 la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|++|.+.++++|++++++++.++.. +..........++++|.++++.+.++
T Consensus 322 laem~~~leaar~l~~~aa~~~d~~-------~~G~~~~~~~~~s~aK~~a~e~a~~v 372 (481)
T 2yyk_A 322 IAEIIVYLEAMRAFWTRAEEEAKEN-------AYGLLVPDRGALDGARNLYPRLYPRI 372 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEC-------TTSCEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccccc-------ccCCcCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876420 00000122456899999999998875
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.96 E-value=1.4e-28 Score=246.00 Aligned_cols=231 Identities=11% Similarity=-0.019 Sum_probs=160.1
Q ss_pred CCC--HHHHHhhhhHhhccceeeEEeccCCCC--------CCCcCCCceEEEEeCCCCeEEEecCCCCcceeccCCCCCC
Q 016297 113 QGT--DEQHQKWLPLAYKMEIIGCYAQTELGH--------GSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV 182 (392)
Q Consensus 113 ~g~--~eq~~~~l~~l~~G~~~~~~a~tE~~~--------gsd~~~~~t~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~ 182 (392)
+|+ .+|+++|||++++|++++++|+|||+. |||+ .++++ ..+ +|+|+|| |+|.|+|| +..
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~-~~~--gdg~Vln-----G~K~~iT~-a~~ 196 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIV-EKT--DDGIIVN-----GVKAVGTG-IAF 196 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEE-EEC--SSEEEEE-----EEEEEEES-GGG
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEE-EEE--CCEEEEE-----EEEEEECC-ccc
Confidence 454 568899999999999999999999986 4777 55554 334 7899999 99999999 999
Q ss_pred CcEEEEEEEEccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCc--cC-----CCCceeEEecceecCccccc
Q 016297 183 STHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGA--YN-----TMDNGVLRFEHVRIPRNQML 255 (392)
Q Consensus 183 Ad~~~V~A~~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~--~~-----~~~~~~v~f~~v~Vp~~~ll 255 (392)
||+++|+++++.......+++|+|| .+.|||++...+.++|... .+ +..++.|.||||+||.+++|
T Consensus 197 Ad~~lV~a~t~~~~~~~~~s~FlVp-------~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl 269 (515)
T 3hwc_A 197 GDYMHIGCLYRPGIPGEQVIFAAIP-------TNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVF 269 (515)
T ss_dssp CSEEEECCCCCTTCCGGGCEEEEEE-------TTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEE
T ss_pred cCEEEEEEEecCCCCCCeEEEEEEE-------CCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHcc
Confidence 9999999987332212238999999 7899999977666655100 11 12378899999999999999
Q ss_pred --ccccccCCCCeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHh
Q 016297 256 --MRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNR 333 (392)
Q Consensus 256 --~~~~~~~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~~q~vq~~ 333 (392)
|. .+.++. .++..+...+...++..+|.+..++..+..++. +| +|++||+||++
T Consensus 270 ~~Ge------~g~g~~------~~~~~~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~---------gI~~fQ~Vq~k 325 (515)
T 3hwc_A 270 HIGN------PEHAKL------YPQRIFDWVHYHILIRQVLRAELIVGLAILITE---HI---------GTSKLPTVSAR 325 (515)
T ss_dssp EESC------TTGGGT------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH---------TCTTSHHHHHH
T ss_pred CCCC------ccHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hc---------CCcccHHHHHH
Confidence 53 333332 111112222111112334444444444444332 23 47899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHhhHHHHhHHHHhhh
Q 016297 334 LFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 334 la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
|++|.+.++++|++++++++..+.. +..........++++|.++++++.++
T Consensus 326 LAem~~~lEaaR~l~~~Aa~~~d~~-------~~G~~~p~~~~as~AK~~ase~~~rv 376 (515)
T 3hwc_A 326 VAKLVAFHLAMQAHLIASEETGFHT-------KGGRYKPNPLIYDFGRAHFLQNQMSV 376 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEC-------TTCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccc-------cCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865321 00100112356899999999998765
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.85 E-value=3.1e-20 Score=186.03 Aligned_cols=231 Identities=10% Similarity=-0.047 Sum_probs=160.6
Q ss_pred HHHHhhhhHhhccceeeEEeccCCCCCCC-----cCCCceEEEEeCCCCeEEEecCCCCcceeccCCCCCCCcEEEEEEE
Q 016297 117 EQHQKWLPLAYKMEIIGCYAQTELGHGSN-----VQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYAR 191 (392)
Q Consensus 117 eq~~~~l~~l~~G~~~~~~a~tE~~~gsd-----~~~~~t~a~~~~~~~~~~Ln~p~~~G~K~~v~~~a~~Ad~~~V~A~ 191 (392)
+...+|+..+.++++..+.++++|...-. ..++-...+. +.+|||||| |.|.|+|| +..||+++|+++
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve-~~~dGiVVn-----GaK~~~T~-a~~Ad~i~V~a~ 206 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIE-KNDKGIVVS-----GVKAIGTG-VAFADWIHIGVF 206 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEE-ECSSEEEEE-----EEEEEEES-GGGCSEEEECCC
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEE-EcCCeEEEe-----eEehhhcC-ccccCEEEEEee
Confidence 44568999999999999999999963211 1111122222 227899999 99999999 999999999999
Q ss_pred EccCCCCCceEEEEEeeccCCCCCCCCCeEEeccCCcccCCc------cCCC-CceeEEecceecCcccccccccccCCC
Q 016297 192 LITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGA------YNTM-DNGVLRFEHVRIPRNQMLMRVSQVTRE 264 (392)
Q Consensus 192 ~~~~~~~~g~~~flV~~~~~~~~~~~~Gv~i~~~~~~~G~~~------~~~~-~~~~v~f~~v~Vp~~~ll~~~~~~~~~ 264 (392)
+....+.++...|+|| .++|||++.......+.+. .++. ..+.|.||||+||.++++..- +.
T Consensus 207 t~~~~~~d~~~~F~VP-------~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~G----e~ 275 (517)
T 4g5e_A 207 FRPGIPGDQIIFAATP-------VNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLG----NP 275 (517)
T ss_dssp CCTTCCGGGCEEEEEE-------TTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEES----CT
T ss_pred cCCCCCccceEEEEEe-------cCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccC----Ch
Confidence 8765555678899999 8999999854433333000 1222 236799999999999987310 12
Q ss_pred CeEEecCchhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHhhHHHHHHHHHH
Q 016297 265 GKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAF 344 (392)
Q Consensus 265 g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~a~~y~~~R~qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a 344 (392)
+.+.. .....+...+...++..+|.++.++..+..+++ ++ .|.+||+||++|++|.+.+|++
T Consensus 276 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~ae---~~---------Gi~~fq~Vq~kLaEm~~~~E~~ 337 (517)
T 4g5e_A 276 EHAKL------YPQRVFDWLHYHALIRQSVRAELMAGLAILITE---HI---------GTNKIPAVQTRVAKLIGFHQAM 337 (517)
T ss_dssp THHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH---------TCTTSHHHHHHHHHHHHHHHHH
T ss_pred hHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hh---------CCcccHHHHHHHHHHHHHHHHH
Confidence 32221 344556677777778888888888888888875 33 3578999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCC-chhHHHHHhhHHHHhHHHHhhh
Q 016297 345 RFVGEWLKWLYTDVTQRLQANDFST-LPEAHACTAGLKSLTTTATAVC 391 (392)
Q Consensus 345 ~~~~~~aa~~~d~~~~~~~~~~~~~-~~~~~~~~a~aK~~~~~~a~~~ 391 (392)
+++++.++.... ..+... .+. ...++++|.++++.+.++
T Consensus 338 ral~~aaa~~a~-------~~~~G~~~P~-~~~a~~aK~~a~~~~~rv 377 (517)
T 4g5e_A 338 LAHIVASEELGF-------HTPGGAYKPN-ILIYDFGRALYLENFSQM 377 (517)
T ss_dssp HHHHHHHHHTCE-------ECTTCCEECC-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc-------cCCCCCcCcC-HHHHHHHHHHHHHHHHHH
Confidence 999887754221 011111 122 356788999999887654
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=82.96 E-value=5.6 Score=40.20 Aligned_cols=74 Identities=7% Similarity=-0.013 Sum_probs=52.7
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHH
Q 016297 298 RAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACT 377 (392)
Q Consensus 298 ~al~~a~~y~~~R~qfG~~~~~~~~~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~ 377 (392)
..+..++.++.+| ||+ .|.+-|.+..+|+|+.+++|++.+.+.++...+... +. +......
T Consensus 469 ~~~~~~~~~~~~~--~~~-------~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~------~~----~~~~~~~ 529 (597)
T 3owa_A 469 KIGLMVAGLAAQK--YGK-------ALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTT------GL----EKNKQKV 529 (597)
T ss_dssp HHHHHHHHHHHHH--HGG-------GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CS----GGGHHHH
T ss_pred HHHHHHHHHHHHH--hCC-------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------Cc----cchHHHH
Confidence 3344455554443 556 889999999999999999999999999988777531 01 2334556
Q ss_pred hhHHHHhHHHHhh
Q 016297 378 AGLKSLTTTATAV 390 (392)
Q Consensus 378 a~aK~~~~~~a~~ 390 (392)
.+++++|.++..+
T Consensus 530 ~~~~~~~~~~~~~ 542 (597)
T 3owa_A 530 LYTEVFCQEAFNE 542 (597)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7888888876544
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=52.12 E-value=60 Score=32.62 Aligned_cols=34 Identities=15% Similarity=0.045 Sum_probs=29.9
Q ss_pred cccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 016297 323 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYT 356 (392)
Q Consensus 323 ~i~~~q~vq~~la~~~~~~~~a~~~~~~aa~~~d 356 (392)
.+...|.+..||+++...++++-+.+.++.+.+.
T Consensus 509 ~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~ 542 (607)
T 2uxw_A 509 GIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLS 542 (607)
T ss_dssp GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7888899999999999999999888888876663
Done!