Your job contains 1 sequence.
>016310
MIMDSPKNPKRPKVYCEFPSFPKGCADSEVLDSRFGYSGVVDSRLNNTPRTYPARRNLKG
FPVNRDFPAGCGGNQRILKVFPIKRDFPVGCGGNQKGFPRKGDCPVRCKIQSLDNSFHFN
DQNKPIIEVVKPLEVYNGLGNSDREKVKKTLNLFREVVSVLMQEQEHEHAGKSGTHKILF
KAAKLLKDEKRWINTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLL
ATSIVESGRYTNDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPV
RVIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSLGQKDYRLDE
MREEQSKSMIKNKPLMWERENIIPCNNMLVG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016310
(391 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063384 - symbol:SUVH5 "SU(VAR)3-9 homolog 5" ... 506 5.7e-48 1
TAIR|locus:2065988 - symbol:SUVH6 "SU(VAR)3-9 homolog 6" ... 449 1.3e-44 2
TAIR|locus:2171574 - symbol:AT5G47160 species:3702 "Arabi... 419 1.5e-41 2
TAIR|locus:2151997 - symbol:AT5G47150 species:3702 "Arabi... 398 2.2e-40 2
TAIR|locus:2175289 - symbol:SUVH1 "SU(VAR)3-9 homolog 1" ... 342 2.6e-30 1
TAIR|locus:2032592 - symbol:SUVH3 "SU(VAR)3-9 homolog 3" ... 336 1.2e-29 1
TAIR|locus:2051083 - symbol:SUVH2 "SU(VAR)3-9 homolog 2" ... 334 1.8e-29 1
TAIR|locus:2140827 - symbol:SUVH9 "SU(VAR)3-9 homolog 9" ... 311 5.6e-27 1
TAIR|locus:2159133 - symbol:SUVH4 "SU(VAR)3-9 homolog 4" ... 289 1.2e-24 1
TAIR|locus:2047266 - symbol:SDG21 "SET domain group 21" s... 266 1.7e-20 1
TAIR|locus:2030953 - symbol:SUVH7 "SU(VAR)3-9 homolog 7" ... 245 4.0e-20 3
TAIR|locus:2064676 - symbol:SDG11 "SET domain protein 11"... 172 1.6e-10 1
UNIPROTKB|F1P4F7 - symbol:UHRF1 "Uncharacterized protein"... 153 1.3e-07 1
UNIPROTKB|F1PJN4 - symbol:UHRF1 "Uncharacterized protein"... 152 1.9e-07 1
UNIPROTKB|F1S7K1 - symbol:UHRF1 "Uncharacterized protein"... 150 3.2e-07 1
MGI|MGI:1338889 - symbol:Uhrf1 "ubiquitin-like, containin... 149 3.9e-07 1
UNIPROTKB|A7E320 - symbol:UHRF1 "E3 ubiquitin-protein lig... 148 5.1e-07 1
UNIPROTKB|Q96T88 - symbol:UHRF1 "E3 ubiquitin-protein lig... 148 5.2e-07 1
RGD|1595855 - symbol:Uhrf1 "ubiquitin-like with PHD and r... 144 1.4e-06 1
TAIR|locus:2138591 - symbol:ORTHL "ORTHRUS-like" species:... 136 4.9e-06 1
ZFIN|ZDB-GENE-040426-2039 - symbol:uhrf1 "ubiquitin-like,... 137 8.1e-06 1
UNIPROTKB|B6CHA3 - symbol:uhrf1 "E3 ubiquitin-protein lig... 132 9.8e-06 2
TAIR|locus:2009420 - symbol:VIM1 "AT1G57820" species:3702... 135 1.1e-05 1
UNIPROTKB|F1MFX7 - symbol:F1MFX7 "Uncharacterized protein... 130 4.6e-05 1
UNIPROTKB|Q96PU4 - symbol:UHRF2 "E3 ubiquitin-protein lig... 129 6.4e-05 1
UNIPROTKB|E2RKA4 - symbol:UHRF2 "Uncharacterized protein"... 129 6.4e-05 1
MGI|MGI:1923718 - symbol:Uhrf2 "ubiquitin-like, containin... 128 8.2e-05 1
RGD|1309990 - symbol:Uhrf2 "ubiquitin-like with PHD and r... 128 8.2e-05 1
UNIPROTKB|F6UA42 - symbol:uhrf1 "E3 ubiquitin-protein lig... 131 0.00017 2
UNIPROTKB|F1NS44 - symbol:F1NS44 "Uncharacterized protein... 121 0.00044 1
TAIR|locus:2013800 - symbol:VIM4 "VARIANT IN METHYLATION ... 117 0.00095 1
TAIR|locus:2013840 - symbol:VIM2 "VARIANT IN METHYLATION ... 117 0.00095 1
>TAIR|locus:2063384 [details] [associations]
symbol:SUVH5 "SU(VAR)3-9 homolog 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS;IDA] [GO:0010216
"maintenance of DNA methylation" evidence=IGI] [GO:0016571 "histone
methylation" evidence=RCA;IDA] [GO:0031048 "chromatin silencing by
small RNA" evidence=IEP;RCA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0051567 "histone
H3-K9 methylation" evidence=RCA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR003606 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
SMART:SM00468 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000775 GO:GO:0008270 GO:GO:0010200 GO:GO:0031048
EMBL:AC004667 GO:GO:0042054 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0010216 KO:K11420
eggNOG:COG3440 Gene3D:2.30.280.10 EMBL:AF344448 EMBL:AY062735
EMBL:BT003374 IPI:IPI00526239 PIR:D84765 RefSeq:NP_181061.1
UniGene:At.12724 PDB:3Q0B PDB:3Q0C PDB:3Q0D PDB:3Q0F PDBsum:3Q0B
PDBsum:3Q0C PDBsum:3Q0D PDBsum:3Q0F ProteinModelPortal:O82175
SMR:O82175 IntAct:O82175 PaxDb:O82175 PRIDE:O82175
EnsemblPlants:AT2G35160.1 GeneID:818083 KEGG:ath:AT2G35160
TAIR:At2g35160 HOGENOM:HOG000154454 InParanoid:O82175 OMA:YLVEEYW
PhylomeDB:O82175 ProtClustDB:CLSN2683680 EvolutionaryTrace:O82175
Genevestigator:O82175 GermOnline:AT2G35160 Uniprot:O82175
Length = 794
Score = 506 (183.2 bits), Expect = 5.7e-48, P = 5.7e-48
Identities = 114/240 (47%), Positives = 161/240 (67%)
Query: 140 GNSDREKVKKTLNLFREVVSVLMQEQEHEHAGKSGTH-KILFKAAKLLKDE-KRWINTPK 197
G+S R KVK+T+ LF E +MQE+E + G + K++ +A+K+LK + K + +
Sbjct: 303 GDSARYKVKETMRLFHETCKKIMQEEEARPRKRDGGNFKVVCEASKILKSKGKNLYSGTQ 362
Query: 198 RLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM-EEGGKLLATSIVESGRYTNDGGY 256
+G++PGVEVGD+FQ+R E+ ++G+H+ +GIDYM ++GG+L+ATSIV SG Y ND
Sbjct: 363 IIGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKDDGGELVATSIVSSGGY-NDVLD 421
Query: 257 CDHLLIYSGHGGNP-KVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKN--LVASV 313
+LIY+G GGN K + P+DQ+L+ GNLALKNS+ K PVRVIRGIKN L +SV
Sbjct: 422 NSDVLIYTGQGGNVGKKKNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSV 481
Query: 314 MKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL-GQKDYRLDEMREEQSKSMIKN 372
+ KN YVYDGLY VE YW+ G G LVFKF LR + GQ + E+ + + KS ++
Sbjct: 482 VAKN---YVYDGLYLVEEYWEETGSHGKLVFKFKLRRIPGQPELPWKEVAKSK-KSEFRD 537
>TAIR|locus:2065988 [details] [associations]
symbol:SUVH6 "SU(VAR)3-9 homolog 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IDA] [GO:0016571 "histone methylation"
evidence=IDA] [GO:0008327 "methyl-CpG binding" evidence=IDA]
[GO:0010428 "methyl-CpNpG binding" evidence=IDA] [GO:0010429
"methyl-CpNpN binding" evidence=IDA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR003606
InterPro:IPR007728 InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033
PROSITE:PS50280 PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317
SMART:SM00466 SMART:SM00468 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0000775 GO:GO:0008270 EMBL:AC006340
GO:GO:0008168 GO:GO:0018024 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0016571 GO:GO:0008327 KO:K11420
eggNOG:COG3440 GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10
HOGENOM:HOG000154454 ProtClustDB:CLSN2683680 EMBL:AF344449
EMBL:AY065374 EMBL:BT002751 IPI:IPI00541041 PIR:C84616
RefSeq:NP_850030.1 RefSeq:NP_973514.1 UniGene:At.28511
ProteinModelPortal:Q8VZ17 SMR:Q8VZ17 PaxDb:Q8VZ17 PRIDE:Q8VZ17
EnsemblPlants:AT2G22740.1 EnsemblPlants:AT2G22740.2 GeneID:816804
KEGG:ath:AT2G22740 TAIR:At2g22740 InParanoid:Q8VZ17 OMA:RRIGNDE
PhylomeDB:Q8VZ17 Genevestigator:Q8VZ17 GermOnline:AT2G22740
Uniprot:Q8VZ17
Length = 790
Score = 449 (163.1 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 110/238 (46%), Positives = 145/238 (60%)
Query: 140 GNSDREKVKKTLNLFREVVSVLMQEQEH--EHAGKSGTH-KILFKAAKLLKDEKRWINTP 196
G+S R KVK+TL LF V ++QE E E + G +I F+A+ +LK +++N+
Sbjct: 266 GDSSRNKVKETLRLFHGVCRKILQEDEAKPEDQRRKGKGLRIDFEASTILKRNGKFLNSG 325
Query: 197 KR-LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGG 255
LG +PGVEVGD+FQ+R E+ I+G+H+ GIDYM+ G +ATSIV SG Y +
Sbjct: 326 VHILGEVPGVEVGDEFQYRMELNILGIHKPSQAGIDYMKYGKAKVATSIVASGGYDDHLD 385
Query: 256 YCDHLLIYSGHGGNP-KVSKDAV----PEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLV 310
D +L Y+G GGN +V K PEDQKLI GNLAL S+E +TPVRVIRG
Sbjct: 386 NSD-VLTYTGQGGNVMQVKKKGEELKEPEDQKLITGNLALATSIEKQTPVRVIRGKHKST 444
Query: 311 ASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL-GQKDYRLDEMREEQSK 367
K N YVYDGLY VE+YWQ G G VFKF LR + GQ + E+++ +SK
Sbjct: 445 HDKSKGGN--YVYDGLYLVEKYWQQVGSHGMNVFKFQLRRIPGQPELSWVEVKKSKSK 500
Score = 51 (23.0 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 79 KVFPIKRDFPVGCG 92
KVF + RDFP GCG
Sbjct: 54 KVFAV-RDFPPGCG 66
Score = 50 (22.7 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 59 KGFPVNRDFPAGCGGNQRILKV 80
K F V RDFP GCG +K+
Sbjct: 54 KVFAV-RDFPPGCGSRAMEVKI 74
Score = 42 (19.8 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 27 DSEVLDSRFGYSGVVDSRLNNTPRTYPARRNLKGFPVNRDFP--AG--CGGNQRIL 78
+ E L R V D R+ P R L G V RD AG C +++I+
Sbjct: 94 EEESLGQRDASENVSDIRMAEPVEVQPLRICLPGGDVVRDLSVTAGDECSNSEQIV 149
>TAIR|locus:2171574 [details] [associations]
symbol:AT5G47160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0042393 "histone binding"
evidence=IEA] InterPro:IPR003105 Pfam:PF02182 PROSITE:PS51015
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB018117
eggNOG:COG3440 Gene3D:2.30.280.10 EMBL:DQ447048 EMBL:DQ653354
IPI:IPI00535555 RefSeq:NP_199527.1 UniGene:At.55414
ProteinModelPortal:Q9LVU3 SMR:Q9LVU3 EnsemblPlants:AT5G47160.1
GeneID:834762 KEGG:ath:AT5G47160 TAIR:At5g47160
HOGENOM:HOG000153146 InParanoid:Q9LVU3 OMA:GDRFIND PhylomeDB:Q9LVU3
ProtClustDB:CLSN2914896 Genevestigator:Q9LVU3 Uniprot:Q9LVU3
Length = 415
Score = 419 (152.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 97/237 (40%), Positives = 149/237 (62%)
Query: 118 HFNDQNKPIIEVVKPLEVYNGLGNSDREKVKKTLNLFREVVSVLMQEQEHEHAG-KSGTH 176
H +++ ++ V++ + L + R+KV++ L +F V L + + G ++
Sbjct: 181 HKDERRSGVLSVIQRNRLSKDL--TPRQKVQEVLRIFTLVFDELDRNKAARRGGSETAKS 238
Query: 177 KILFKAAKLLKDEKRWINTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEG 236
+I ++ +L++ +N+ KR+GS+PG++VGDK Q++ +++IGLH +GIDYM +G
Sbjct: 239 RIDYQTWTILREMGMQVNSQKRIGSVPGIKVGDKIQFKAALSVIGLHFGIMSGIDYMYKG 298
Query: 237 GKLLATSIVESGRYTNDGG--YCDHLLIYSGHGGNPKVSKD--AVPEDQKLIQGNLALKN 292
K +ATSIV S ND G + + ++IY G GGN + SKD A+ +DQKL+ GNLAL N
Sbjct: 299 NKEVATSIVSSEG--NDYGDRFINDVMIYCGQGGNMR-SKDHKAI-KDQKLVGGNLALAN 354
Query: 293 SMEAKTPVRVIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
S++ KTPVRVIRG + L YVYDGLY VE+YW+ RGP GN++FKF LR
Sbjct: 355 SIKEKTPVRVIRGERRL-----DNRGKDYVYDGLYRVEKYWEERGPQGNILFKFKLR 406
Score = 38 (18.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 25/97 (25%), Positives = 35/97 (36%)
Query: 5 SPKNPKRPKVYC-EFPSFP-KGCAD---SEVLDSRFGYSGVVDSRLNNTP-RTY--PARR 56
SP N +R + +FP F K +D +V + G DS R + P
Sbjct: 8 SPSNKRRRVSFVRDFPQFSVKDESDIGGDDVATIKENLDGKEDSNCVGVAYRDHHRPKEE 67
Query: 57 NLKGFPVNRDFPAGCGGNQRILKVFPIKRDFPVGCGG 93
+ F GN K P KR+ P+ C G
Sbjct: 68 SFDSIMKKAGFNVA-NGNLGNGKFPPSKRNVPLPCEG 103
>TAIR|locus:2151997 [details] [associations]
symbol:AT5G47150 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0042393 "histone binding"
evidence=IEA] InterPro:IPR003105 Pfam:PF02182 PROSITE:PS51015
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB025609
EMBL:AB018117 eggNOG:COG3440 Gene3D:2.30.280.10 IPI:IPI00521351
RefSeq:NP_199526.1 UniGene:At.29911 ProteinModelPortal:Q9FHI0
SMR:Q9FHI0 DNASU:834761 EnsemblPlants:AT5G47150.1 GeneID:834761
KEGG:ath:AT5G47150 TAIR:At5g47150 HOGENOM:HOG000152471
InParanoid:Q9FHI0 OMA:YATSSHR PhylomeDB:Q9FHI0
ProtClustDB:CLSN2914894 Genevestigator:Q9FHI0 Uniprot:Q9FHI0
Length = 328
Score = 398 (145.2 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 92/223 (41%), Positives = 133/223 (59%)
Query: 139 LGNSD-----REKVKKTLNLFREVVSVLMQEQEHEHAGK--SGTHKILFKAAKLLKDEKR 191
+GNSD REKV + L+LF++V + L ++++ G T +I K +L+ +
Sbjct: 108 IGNSDCDPTPREKVLEVLSLFKQVYNQLDRDKKARRGGDFLDATSRIDLKTLTVLEKMGK 167
Query: 192 WINTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYT 251
+NT KR+GS+PG+ +GD FQ++ E+ ++GLH + GIDY++ G + TSIV S Y
Sbjct: 168 QVNTEKRIGSVPGINIGDVFQYKTELRVVGLHSKPMCGIDYIKLGDDRITTSIVASEGYG 227
Query: 252 NDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVA 311
+ Y +++Y+G GGN ++K EDQKL++GNLAL SM K+ VRVIRG + L
Sbjct: 228 YNDTYNSGVMVYTGEGGNV-INKQKKTEDQKLVKGNLALATSMRQKSQVRVIRGEERL-- 284
Query: 312 SVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQ 353
+ YVYDGLY VE YW R G V+KF L R GQ
Sbjct: 285 ---DRKGKRYVYDGLYMVEEYWVERDVRGKSVYKFKLCRIPGQ 324
Score = 48 (22.0 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 74 NQRILKVFPIKRDFPVGCG 92
+Q+ VF I RDFP GCG
Sbjct: 2 SQKRSLVFAI-RDFPPGCG 19
Score = 44 (20.5 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 65 RDFPAGCG 72
RDFP GCG
Sbjct: 12 RDFPPGCG 19
>TAIR|locus:2175289 [details] [associations]
symbol:SUVH1 "SU(VAR)3-9 homolog 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042054
"histone methyltransferase activity" evidence=ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000775
GO:GO:0008270 EMBL:AB005245 eggNOG:COG2940 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0040029
KO:K11420 Gene3D:2.30.280.10 EMBL:AF344444 IPI:IPI00548211
RefSeq:NP_196113.1 RefSeq:NP_850767.1 UniGene:At.8375
ProteinModelPortal:Q9FF80 SMR:Q9FF80 PaxDb:Q9FF80 PRIDE:Q9FF80
EnsemblPlants:AT5G04940.1 EnsemblPlants:AT5G04940.2 GeneID:830376
KEGG:ath:AT5G04940 TAIR:At5g04940 HOGENOM:HOG000238382
InParanoid:Q9FF80 OMA:RENGNRE PhylomeDB:Q9FF80
ProtClustDB:CLSN2686453 Genevestigator:Q9FF80 GermOnline:AT5G04940
Uniprot:Q9FF80
Length = 670
Score = 342 (125.4 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 89/218 (40%), Positives = 120/218 (55%)
Query: 141 NSDREKVKKTLNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKRLG 200
N +RE V L F + Q ++ + A + K+ NT KR G
Sbjct: 152 NGNRELVLSVLMRFDALRRRFAQLEDAKEAVSGIIKRPDLKSGSTCMGRGVRTNTKKRPG 211
Query: 201 SIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKL----LATSIVESGRYTNDGGY 256
+PGVE+GD F +RFEM ++GLH GIDY+ G+ +ATSIV SG Y ND G
Sbjct: 212 IVPGVEIGDVFFFRFEMCLVGLHSPSMAGIDYLVVKGETEEEPIATSIVSSGYYDNDEGN 271
Query: 257 CDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKK 316
D +LIY+G GGN KD DQKL +GNLAL+ S+ + VRVIRG+K AS
Sbjct: 272 PD-VLIYTGQGGN--ADKDKQSSDQKLERGNLALEKSLRRDSAVRVIRGLKE--AS---H 323
Query: 317 NNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQ 353
N +Y+YDGLY ++ W +G G+ FK+ L+R+ GQ
Sbjct: 324 NAKIYIYDGLYEIKESWVEKGKSGHNTFKYKLVRAPGQ 361
>TAIR|locus:2032592 [details] [associations]
symbol:SUVH3 "SU(VAR)3-9 homolog 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS] [GO:0005694 "chromosome"
evidence=IDA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR003105
InterPro:IPR003606 InterPro:IPR007728 InterPro:IPR025794
Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280 PROSITE:PS50867
PROSITE:PS51015 SMART:SM00317 SMART:SM00466 SMART:SM00468
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005694
GO:GO:0000775 GO:GO:0003677 GO:GO:0008270 GO:GO:0042054
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
EMBL:AC008017 GO:GO:0040029 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 EMBL:AF344446 EMBL:AY099620
EMBL:BT002137 IPI:IPI00533947 PIR:F96756 RefSeq:NP_565056.1
UniGene:At.11687 UniGene:At.43232 ProteinModelPortal:Q9C5P4
SMR:Q9C5P4 IntAct:Q9C5P4 PaxDb:Q9C5P4 PRIDE:Q9C5P4
EnsemblPlants:AT1G73100.1 GeneID:843641 KEGG:ath:AT1G73100
TAIR:At1g73100 InParanoid:Q9C5P4 OMA:IHIAFFA PhylomeDB:Q9C5P4
ProtClustDB:CLSN2917436 Genevestigator:Q9C5P4 GermOnline:AT1G73100
Uniprot:Q9C5P4
Length = 669
Score = 336 (123.3 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 105/282 (37%), Positives = 146/282 (51%)
Query: 82 PIKRDFPVGCGGNQKGFPR-KGDCPVRCKIQSLDNSFHFNDQNKPIIEVVKPL--EVYNG 138
P K + P G ++G R KG V+ K + N+ N + +VVK + +G
Sbjct: 95 PTKTNGPSSSSGTKRGVGRPKGTTSVKKK----EKKTVANEPNLDV-QVVKKFSSDFDSG 149
Query: 139 LGNSDREKVKKTLNLFREVVSVLMQ-EQEHEHAGK-SGTHKILFKAAKLLKDEKRWINTP 196
+ ++RE L V SVLM+ + + T KAA L N
Sbjct: 150 ISAAEREDGNAYL-----VSSVLMRFDAVRRRLSQVEFTKSATSKAAGTLMSNGVRTNMK 204
Query: 197 KRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM-EEGG---KLLATSIVESGRYTN 252
KR+G++PG+EVGD F R EM ++GLH Q GIDY+ + G + LATSIV SGRY
Sbjct: 205 KRVGTVPGIEVGDIFFSRIEMCLVGLHMQTMAGIDYIISKAGSDEESLATSIVSSGRYEG 264
Query: 253 DGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVAS 312
+ + L IYSG GGN ++ A DQKL +GNLAL+NS+ VRV+RG ++ AS
Sbjct: 265 EAQDPESL-IYSGQGGNADKNRQA--SDQKLERGNLALENSLRKGNGVRVVRGEED-AAS 320
Query: 313 VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQ 353
K +Y+YDGLY + W +G G FK+ L+R GQ
Sbjct: 321 ---KTGKIYIYDGLYSISESWVEKGKSGCNTFKYKLVRQPGQ 359
>TAIR|locus:2051083 [details] [associations]
symbol:SUVH2 "SU(VAR)3-9 homolog 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=IMP;TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS] [GO:0005720 "nuclear
heterochromatin" evidence=IDA] [GO:0016571 "histone methylation"
evidence=RCA;IDA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR003606
InterPro:IPR007728 InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033
PROSITE:PS50280 PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317
SMART:SM00466 SMART:SM00468 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000775 GO:GO:0008270 GO:GO:0005720 GO:GO:0042054
GO:GO:0018024 GO:GO:0040029 EMBL:AC002332 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 EMBL:AF344445
IPI:IPI00548715 PIR:F84743 RefSeq:NP_180887.1 UniGene:At.12115
ProteinModelPortal:O22781 SMR:O22781 STRING:O22781
EnsemblPlants:AT2G33290.1 GeneID:817892 KEGG:ath:AT2G33290
TAIR:At2g33290 InParanoid:O22781 OMA:FEYLARP PhylomeDB:O22781
ProtClustDB:CLSN2685938 Genevestigator:O22781 GermOnline:AT2G33290
Uniprot:O22781
Length = 651
Score = 334 (122.6 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 94/240 (39%), Positives = 131/240 (54%)
Query: 144 REKVKKTLNLFREVVSVLMQEQEHEHA-GKSGTHKILFKAAKLLKDEKRWINTPKRL-GS 201
R+ +K+T + + LM E H G+ + AA +++D W+N K + G
Sbjct: 149 RQVMKRTRMTYESLRIHLMAESMKNHVLGQGRRRRSDMAAAYIMRDRGLWLNYDKHIVGP 208
Query: 202 IPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM--EEG--GKLLATSIVESGRYTNDGGYC 257
+ GVEVGD F +R E+ ++GLH Q GID + E G+ +ATSIV SG Y +D
Sbjct: 209 VTGVEVGDIFFYRMELCVLGLHGQTQAGIDCLTAERSATGEPIATSIVVSGGYEDDEDTG 268
Query: 258 DHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKN 317
D +L+Y+GHGG K ++Q+L+ GNL ++ SM VRVIRGIK S+ K
Sbjct: 269 D-VLVYTGHGGQDHQHKQC--DNQRLVGGNLGMERSMHYGIEVRVIRGIK-YENSISSK- 323
Query: 318 NVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQKDYRLDEMREEQSKSMIKNKPLM 376
VYVYDGLY + +W A G G VFKF L+R GQ MR Q+ ++NKP M
Sbjct: 324 --VYVYDGLYKIVDWWFAVGKSGFGVFKFRLVRIEGQPMMGSAVMRFAQT---LRNKPSM 378
>TAIR|locus:2140827 [details] [associations]
symbol:SUVH9 "SU(VAR)3-9 homolog 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0009294 "DNA mediated
transformation" evidence=IMP] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR003606 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
SMART:SM00468 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0000775 GO:GO:0008270 EMBL:AL049656 EMBL:AL161536
GO:GO:0009294 GO:GO:0018024 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 ProtClustDB:CLSN2685938
EMBL:AF344452 IPI:IPI00529277 PIR:T06648 RefSeq:NP_001031625.1
RefSeq:NP_193082.1 UniGene:At.3118 ProteinModelPortal:Q9T0G7
SMR:Q9T0G7 STRING:Q9T0G7 PRIDE:Q9T0G7 EnsemblPlants:AT4G13460.1
EnsemblPlants:AT4G13460.2 GeneID:826978 KEGG:ath:AT4G13460
TAIR:At4g13460 InParanoid:Q9T0G7 OMA:EGQAEMG PhylomeDB:Q9T0G7
Genevestigator:Q9T0G7 GermOnline:AT4G13460 Uniprot:Q9T0G7
Length = 650
Score = 311 (114.5 bits), Expect = 5.6e-27, P = 5.6e-27
Identities = 83/223 (37%), Positives = 129/223 (57%)
Query: 144 REKVKKTLNLFREV-VSVLMQEQEHEHAG--KSGTHKILFKAAKLLKDEKRWINTPKRL- 199
RE V+KT ++ + + ++M+E + G ++ KA +++D W+N KR+
Sbjct: 145 REHVRKTRMIYDSLRMFLMMEEAKRNGVGGRRARADGKAGKAGSMMRDCMLWMNRDKRIV 204
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM----EEGGKLLATSIVESGRYTNDGG 255
GSIPGV+VGD F +RFE+ ++GLH +GID++ G+ +ATS++ SG Y +D
Sbjct: 205 GSIPGVQVGDIFFFRFELCVMGLHGHPQSGIDFLTGSLSSNGEPIATSVIVSGGYEDDDD 264
Query: 256 YCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIK--NLVASV 313
D +++Y+G GG ++ + A E Q+L GNLA++ SM VRVIRG+K N V+S
Sbjct: 265 QGD-VIMYTGQGGQDRLGRQA--EHQRLEGGNLAMERSMYYGIEVRVIRGLKYENEVSSR 321
Query: 314 MKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL-GQKD 355
VYVYDGL+ + W G G VFK+ L + GQ +
Sbjct: 322 ------VYVYDGLFRIVDSWFDVGKSGFGVFKYRLERIEGQAE 358
>TAIR|locus:2159133 [details] [associations]
symbol:SUVH4 "SU(VAR)3-9 homolog 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IDA] [GO:0016571 "histone methylation"
evidence=RCA;IDA] [GO:0018022 "peptidyl-lysine methylation"
evidence=IDA] [GO:0046974 "histone methyltransferase activity
(H3-K9 specific)" evidence=IDA] [GO:0008327 "methyl-CpG binding"
evidence=IDA] [GO:0010385 "double-stranded methylated DNA binding"
evidence=IDA] [GO:0010428 "methyl-CpNpG binding" evidence=IDA]
[GO:0010429 "methyl-CpNpN binding" evidence=IDA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA;IMP] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006270 "DNA replication
initiation" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000775 GO:GO:0008270
EMBL:AB005230 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0046974 GO:GO:0010216 GO:GO:0008327 KO:K11420 GO:GO:0010385
eggNOG:COG3440 GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10
HOGENOM:HOG000238382 EMBL:AF344447 EMBL:AF538715 EMBL:BT002313
IPI:IPI00540897 RefSeq:NP_196900.1 UniGene:At.8330
ProteinModelPortal:Q8GZB6 SMR:Q8GZB6 STRING:Q8GZB6 PaxDb:Q8GZB6
PRIDE:Q8GZB6 EnsemblPlants:AT5G13960.1 GeneID:831244
KEGG:ath:AT5G13960 TAIR:At5g13960 InParanoid:Q8GZB6 OMA:DCEGDCA
PhylomeDB:Q8GZB6 ProtClustDB:CLSN2916622 Genevestigator:Q8GZB6
GermOnline:AT5G13960 Uniprot:Q8GZB6
Length = 624
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 85/225 (37%), Positives = 116/225 (51%)
Query: 146 KVKKTLNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKRLGSIPGV 205
KV K L LF + + +Q + K T I KA +L K +G +PG+
Sbjct: 104 KVTKCLRLFNKQYLLCVQAKLSRPDLKGVTEMI--KAKAILYPRKI-------IGDLPGI 154
Query: 206 EVGDKFQWRFEMTIIGLHQQFNNGIDYME-------EGGKL-LATSIVESGRYTNDGGYC 257
+VG +F R EM +G H + NGIDYM KL LA SIV SG+Y +D
Sbjct: 155 DVGHRFFSRAEMCAVGFHNHWLNGIDYMSMEYEKEYSNYKLPLAVSIVMSGQYEDDLDNA 214
Query: 258 DHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKN 317
D + Y+G GG+ +DQ L +GNLALK+ E PVRV RG N +S K+
Sbjct: 215 D-TVTYTGQGGHNLTGNKRQIKDQLLERGNLALKHCCEYNVPVRVTRG-HNCKSSYTKR- 271
Query: 318 NVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL-GQKDYRLDEM 361
VY YDGLY VE++W +G G V+K+ L+ L GQ + D++
Sbjct: 272 --VYTYDGLYKVEKFWAQKGVSGFTVYKYRLKRLEGQPELTTDQV 314
>TAIR|locus:2047266 [details] [associations]
symbol:SDG21 "SET domain group 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=TAS] [GO:0042054 "histone methyltransferase
activity" evidence=ISS] [GO:0008361 "regulation of cell size"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR003105
InterPro:IPR003606 InterPro:IPR007728 InterPro:IPR017956
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00384
SMART:SM00466 SMART:SM00468 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0000775 GO:GO:0003677 GO:GO:0008270
GO:GO:0042054 EMBL:AC007266 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0040029 KO:K11420
eggNOG:COG3440 Gene3D:2.30.280.10 HOGENOM:HOG000238382
ProtClustDB:CLSN2687844 EMBL:AF344451 IPI:IPI00524236 PIR:C84640
RefSeq:NP_180049.2 UniGene:At.66241 ProteinModelPortal:Q9C5P0
SMR:Q9C5P0 STRING:Q9C5P0 PaxDb:Q9C5P0 PRIDE:Q9C5P0
EnsemblPlants:AT2G24740.1 GeneID:817010 KEGG:ath:AT2G24740
TAIR:At2g24740 InParanoid:Q9C5P0 OMA:NEEAHAT PhylomeDB:Q9C5P0
Genevestigator:Q9C5P0 GermOnline:AT2G24740 Uniprot:Q9C5P0
Length = 755
Score = 266 (98.7 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 71/165 (43%), Positives = 92/165 (55%)
Query: 194 NTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM--EEGGK--LLATSIVESGR 249
N +R+G IPGV+VGD F + EM ++GLH+ GID + +E G ATS+V SG+
Sbjct: 304 NMTRRIGPIPGVQVGDIFYYWCEMCLVGLHRNTAGGIDSLLAKESGVDGPAATSVVTSGK 363
Query: 250 YTNDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNL 309
Y N+ + LIYSGHGG P DQ L +GN AL+ S+ + VRVIRG
Sbjct: 364 YDNETEDLE-TLIYSGHGGKPC--------DQVLQRGNRALEASVRRRNEVRVIRG---- 410
Query: 310 VASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQ 353
+ N VY+YDGLY V WQ G G ++F LLR GQ
Sbjct: 411 ---ELYNNEKVYIYDGLYLVSDCWQVTGKSGFKEYRFKLLRKPGQ 452
>TAIR|locus:2030953 [details] [associations]
symbol:SUVH7 "SU(VAR)3-9 homolog 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR007728 InterPro:IPR017956
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00384
SMART:SM00466 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0000775 GO:GO:0003677 GO:GO:0008270 EMBL:AC034106
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
KO:K11420 eggNOG:COG3440 Gene3D:2.30.280.10 HOGENOM:HOG000238382
EMBL:AF344450 IPI:IPI00542064 PIR:G86312 RefSeq:NP_564036.1
UniGene:At.15818 ProteinModelPortal:Q9C5P1 SMR:Q9C5P1 PaxDb:Q9C5P1
PRIDE:Q9C5P1 EnsemblPlants:AT1G17770.1 GeneID:838355
KEGG:ath:AT1G17770 TAIR:At1g17770 InParanoid:Q9C5P1 OMA:QVSEFIN
PhylomeDB:Q9C5P1 ProtClustDB:CLSN2687844 Genevestigator:Q9C5P1
GermOnline:AT1G17770 Uniprot:Q9C5P1
Length = 693
Score = 245 (91.3 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 61/165 (36%), Positives = 90/165 (54%)
Query: 194 NTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLL----ATSIVESGR 249
NT +R+G++PG+ VGD F + EM ++GLH+ GID+ + A +V +G+
Sbjct: 221 NTRRRIGAVPGIHVGDIFYYWGEMCLVGLHKSNYGGIDFFTAAESAVEGHAAMCVVTAGQ 280
Query: 250 YTNDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNL 309
Y + D LIYSG GG V +A DQ++ GNLAL+ S+ VRV+RG
Sbjct: 281 YDGETEGLD-TLIYSGQGGTD-VYGNA--RDQEMKGGNLALEASVSKGNDVRVVRG---- 332
Query: 310 VASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQ 353
V + N +Y+YDG+Y V ++W G G F+F L+R Q
Sbjct: 333 VIHPHENNQKIYIYDGMYLVSKFWTVTGKSGFKEFRFKLVRKPNQ 377
Score = 53 (23.7 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 SPKNPKRPKVYC--EFPSFPKGCADSEVLDSRF--GYSGVVDS 43
+P PK+PKVY +G DSE+ ++ G +VDS
Sbjct: 142 TPTEPKKPKVYDPNSLKVTSRGNFDSEITEAETETGNQEIVDS 184
Score = 42 (19.8 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 344 FKFLLRSLGQKDYRLDEMREEQSKSMIKNKPLMWERENIIPCNNMLV 390
F F +SLG ++ R + + +N L+ NI+ C L+
Sbjct: 449 FHFDRQSLGCQNCRHQPCMHQNCTCVQRNGDLLPYHNNILVCRKPLI 495
>TAIR|locus:2064676 [details] [associations]
symbol:SDG11 "SET domain protein 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR007728 Pfam:PF02182 Pfam:PF05033
PROSITE:PS50280 PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317
SMART:SM00466 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000775 GO:GO:0008270 GO:GO:0018024 PROSITE:PS50868
EMBL:AC005970 Gene3D:2.30.280.10 IPI:IPI00543916 PIR:G84472
RefSeq:NP_178647.1 UniGene:At.41135 ProteinModelPortal:Q3EC60
SMR:Q3EC60 PaxDb:Q3EC60 PRIDE:Q3EC60 EnsemblPlants:AT2G05900.1
GeneID:815142 KEGG:ath:AT2G05900 TAIR:At2g05900 eggNOG:KOG1082
HOGENOM:HOG000154456 InParanoid:Q3EC60 OMA:HIPPLTE PhylomeDB:Q3EC60
ProtClustDB:CLSN2912986 Genevestigator:Q3EC60 GermOnline:AT2G05900
Uniprot:Q3EC60
Length = 312
Score = 172 (65.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 48/144 (33%), Positives = 76/144 (52%)
Query: 217 MTIIGLHQ-----QFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIYSGHGGNPK 271
M ++GLH +F D+ +E GK +A S++ SG+ + D L I++G GG
Sbjct: 1 MGLVGLHSGTIDMEFIGVEDHGDEEGKQIAVSVISSGKNADKTEDPDSL-IFTGFGGTDM 59
Query: 272 VSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNNVVYVYDGLYFVER 331
P +QKL + N+ L+ + K+ VRV+R +K+ + N +Y+YDG Y +
Sbjct: 60 YHGQ--PCNQKLERLNIPLEAAFRKKSIVRVVRCMKD----EKRTNGNIYIYDGTYMITN 113
Query: 332 YWQARGPFGNLVFKF-LLRSLGQK 354
W+ G G +VFKF L+R QK
Sbjct: 114 RWEEEGQNGFIVFKFKLVREPDQK 137
>UNIPROTKB|F1P4F7 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005657 "replication fork" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0031493 "nucleosomal histone binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
SMART:SM00466 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 GO:GO:0000792
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 OMA:HVEPGLQ InterPro:IPR021991
Pfam:PF12148 EMBL:AADN02062015 IPI:IPI00586414
Ensembl:ENSGALT00000006575 Uniprot:F1P4F7
Length = 733
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 78/281 (27%), Positives = 118/281 (41%)
Query: 91 CGGNQKGFPRKGDCPVRCKIQSLDNSFHFNDQNKPIIEVVKPLEVYNGLGNSDREKVKKT 150
CGG Q P K + C D +FH N P+ + + Y +D +V
Sbjct: 277 CGGKQD--PDK---QLMC--DECDMAFHIYCLNPPLSSIPDDEDWYCPECRNDASEVV-- 327
Query: 151 LNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKR-LGSIPGVEVGD 209
L E + ++Q+ A S + + K + K P G IPG+ VG
Sbjct: 328 --LAGEKLKESKKKQKMASANSS-SRRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGT 384
Query: 210 KFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIYSGHG-- 267
+++R +++ G+H+ GI G A S+V +G Y +D + + G
Sbjct: 385 MWKFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDIDHGNSFTYTGSGGRD 441
Query: 268 --GNPKVSKDAVPEDQKLIQGNLAL----------KNSMEAKT-----PVRVIRGIKNLV 310
GN + ++ + DQKL N AL KN EAK PVRV+R +K
Sbjct: 442 LSGNKRTAEQSC--DQKLTNMNRALALNCSAPINDKNGAEAKDWRAGKPVRVVRNVKGGK 499
Query: 311 ASVMK--KNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
S + N YDG+Y V +YW G G LV+++LLR
Sbjct: 500 HSKYAPVEGNR---YDGIYKVVKYWPETGKSGFLVWRYLLR 537
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 75/281 (26%), Positives = 116/281 (41%)
Query: 91 CGGNQKGFPRKGDCPVRCKIQSLDNSFHFNDQNKPIIEVVKPLEVYNGLGNSDREKVKKT 150
CGG Q P K + C D +FH P+ + K E Y +D +V
Sbjct: 324 CGGKQD--PDK---QLMC--DECDMAFHIYCLRPPLSSIPKEDEWYCPECRNDASEVVLA 376
Query: 151 LNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKR-LGSIPGVEVGD 209
+E +++ + S + + K + K P G IPG+ VG
Sbjct: 377 GEKLKE-----SKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGT 431
Query: 210 KFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIYSGHG-- 267
+++R +++ G+H+ GI G A S+V +G Y +D + + G
Sbjct: 432 MWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDHGNSFTYTGSGGRD 488
Query: 268 --GNPKVSKDAVPEDQKLIQGNLAL----------KNSMEAKT-----PVRVIRGIKNLV 310
GN + ++ + DQKL N AL + EAK PVRV+R +K
Sbjct: 489 LSGNKRTAEQSC--DQKLTNTNRALALNCSAPINDRKGAEAKDWRSGKPVRVVRNVKGRK 546
Query: 311 AS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
S + N YDG+Y V RYW +G G LV+++LLR
Sbjct: 547 HSKYAPAEGNR---YDGIYKVVRYWPEKGKSGFLVWRYLLR 584
>UNIPROTKB|F1S7K1 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0031493 "nucleosomal histone binding" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0000792 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:CU681848
Ensembl:ENSSSCT00000014764 Uniprot:F1S7K1
Length = 813
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 55/171 (32%), Positives = 81/171 (47%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPG+ VG +++R +++ G+H+ GI G A S+V +G Y +D + +
Sbjct: 435 GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDHGNS 491
Query: 260 LLIYSGHG----GNPKVSKDAVPEDQKLIQGNLAL----------KNSMEAKT-----PV 300
G GN + ++ + DQKL N AL + EAK PV
Sbjct: 492 FTYTGSGGRDLSGNKRTAEQSC--DQKLTNTNRALALNCFAPINDRKGAEAKDWRSGKPV 549
Query: 301 RVIRGIKNLVASVMK--KNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
RV+R +K S + N YDG+Y V RYW +G G LV++FLLR
Sbjct: 550 RVVRNVKGRKHSKYAPVEGNR---YDGIYKVVRYWPEKGKSGFLVWRFLLR 597
>MGI|MGI:1338889 [details] [associations]
symbol:Uhrf1 "ubiquitin-like, containing PHD and RING finger
domains, 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0000790 "nuclear chromatin" evidence=ISO;IDA]
[GO:0000791 "euchromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO;IDA] [GO:0000987 "core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA;TAS] [GO:0005657 "replication fork"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;IMP]
[GO:0010390 "histone monoubiquitination" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031493
"nucleosomal histone binding" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;IDA]
[GO:0042393 "histone binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 MGI:MGI:1338889 Prosite:PS00299 Prosite:PS00518
GO:GO:0046872 GO:GO:0008283 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0016363
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0010390 GO:GO:0031493 GO:GO:0010216 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0000791 eggNOG:COG3440 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 OrthoDB:EOG408N7M EMBL:D87908
EMBL:AF274046 EMBL:AK075819 EMBL:AK143688 EMBL:AK145376
EMBL:AK145543 EMBL:AK146951 EMBL:AK147046 EMBL:AK150489
EMBL:AK151701 EMBL:AK151837 EMBL:AK152930 EMBL:AK153083
EMBL:AC026385 EMBL:BC022167 EMBL:AB066246 IPI:IPI00130200
RefSeq:NP_001104548.1 RefSeq:NP_001104549.1 RefSeq:NP_001104550.1
RefSeq:NP_035061.3 UniGene:Mm.42196 PDB:2ZKD PDB:2ZKE PDB:2ZKF
PDB:2ZKG PDB:2ZO0 PDB:2ZO1 PDB:2ZO2 PDB:3F8I PDB:3F8J PDB:3FDE
PDBsum:2ZKD PDBsum:2ZKE PDBsum:2ZKF PDBsum:2ZKG PDBsum:2ZO0
PDBsum:2ZO1 PDBsum:2ZO2 PDBsum:3F8I PDBsum:3F8J PDBsum:3FDE
ProteinModelPortal:Q8VDF2 SMR:Q8VDF2 MINT:MINT-1172910
STRING:Q8VDF2 PhosphoSite:Q8VDF2 REPRODUCTION-2DPAGE:Q8VDF2
PRIDE:Q8VDF2 Ensembl:ENSMUST00000001258 Ensembl:ENSMUST00000113035
Ensembl:ENSMUST00000113038 Ensembl:ENSMUST00000113039 GeneID:18140
KEGG:mmu:18140 InParanoid:Q8VDF2 EvolutionaryTrace:Q8VDF2
NextBio:293384 Bgee:Q8VDF2 Genevestigator:Q8VDF2
GermOnline:ENSMUSG00000001228 Uniprot:Q8VDF2
Length = 782
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 56/169 (33%), Positives = 82/169 (48%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPGV VG +++R +++ G+H+ GI G A S+V +G Y +D ++
Sbjct: 424 GPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDNGNY 480
Query: 260 LLIYSGHGGNP-KVSKDAVPE--DQKLIQGNLAL---------KNSMEAKT-----PVRV 302
Y+G GG +K + DQKL N AL + EA+ PVRV
Sbjct: 481 FT-YTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRV 539
Query: 303 IRGIKNLVAS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
+R +K S + N YDG+Y V +YW RG G LV+++LLR
Sbjct: 540 VRNMKGGKHSKYAPAEGNR---YDGIYKVVKYWPERGKSGFLVWRYLLR 585
>UNIPROTKB|A7E320 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9913 "Bos taurus" [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0000791 "euchromatin"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0035064 "methylated histone residue binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0016574 "histone ubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031493 "nucleosomal
histone binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:DAAA02019593
EMBL:DAAA02019594 EMBL:BC151671 IPI:IPI00904793
RefSeq:NP_001096568.1 UniGene:Bt.64682 ProteinModelPortal:A7E320
SMR:A7E320 STRING:A7E320 Ensembl:ENSBTAT00000044908 GeneID:530411
KEGG:bta:530411 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ
NextBio:20875252 ArrayExpress:A7E320 GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 Uniprot:A7E320
Length = 786
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 56/171 (32%), Positives = 82/171 (47%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPG+ VG +++R +++ G+H+ GI G A S+V +G Y +D + +
Sbjct: 423 GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNHG---AYSLVLAGGYEDDVDHGNS 479
Query: 260 LLIYSGHG----GNPKVSKDAVPEDQKLIQGNLALK-------NSM---EAKT-----PV 300
G GN + ++ + DQKL N AL N + EAK PV
Sbjct: 480 FTYTGSGGRDLSGNKRTAEQSC--DQKLTNTNRALALNCFAPINDLKGAEAKDWRSGKPV 537
Query: 301 RVIRGIKNLVASVMK--KNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
RV+R +K S + N YDG+Y V RYW +G G LV++FLLR
Sbjct: 538 RVVRNVKGRKHSKYAPIEGNR---YDGIYKVVRYWPEKGKSGFLVWRFLLR 585
>UNIPROTKB|Q96T88 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0008327 "methyl-CpG
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0016574 "histone ubiquitination" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000791 "euchromatin" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0005657 "replication fork" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0044729 "hemi-methylated DNA-binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000373
"positive regulation of DNA topoisomerase (ATP-hydrolyzing)
activity" evidence=IC] [GO:0032270 "positive regulation of cellular
protein metabolic process" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IC] [GO:0031493 "nucleosomal histone binding"
evidence=ISS] [GO:0010390 "histone monoubiquitination"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=IEP] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0006281 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 GO:GO:0042802
EMBL:CH471139 GO:GO:0000987 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0032270
GO:GO:0004842 GO:GO:0016363 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0010390 GO:GO:0031493
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
GO:GO:0008327 PDB:3T6R PDBsum:3T6R PDB:3DB3 PDBsum:3DB3 PDB:3ASK
PDB:3ASL PDB:4GY5 PDBsum:3ASK PDBsum:3ASL PDBsum:4GY5
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:AC027319
GO:GO:2000373 CTD:29128 HOGENOM:HOG000124662 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:AF129507
EMBL:AB177623 EMBL:AB177624 EMBL:AB075601 EMBL:AF274048
EMBL:EF560733 EMBL:AK025578 EMBL:AK289389 EMBL:AK314579
EMBL:AY787925 EMBL:AC053467 EMBL:BC113875 IPI:IPI00797945
RefSeq:NP_001041666.1 RefSeq:NP_037414.3 UniGene:Hs.108106 PDB:2FAZ
PDB:2L3R PDB:2LGG PDB:2LGK PDB:2LGL PDB:2PB7 PDB:3BI7 PDB:3CLZ
PDB:3DB4 PDB:3DWH PDB:3FL2 PDB:3SHB PDB:3SOU PDB:3SOW PDB:3SOX
PDB:3ZVY PDB:3ZVZ PDBsum:2FAZ PDBsum:2L3R PDBsum:2LGG PDBsum:2LGK
PDBsum:2LGL PDBsum:2PB7 PDBsum:3BI7 PDBsum:3CLZ PDBsum:3DB4
PDBsum:3DWH PDBsum:3FL2 PDBsum:3SHB PDBsum:3SOU PDBsum:3SOW
PDBsum:3SOX PDBsum:3ZVY PDBsum:3ZVZ ProteinModelPortal:Q96T88
SMR:Q96T88 IntAct:Q96T88 MINT:MINT-2815626 STRING:Q96T88
PhosphoSite:Q96T88 DMDM:67462077 PaxDb:Q96T88 PRIDE:Q96T88
DNASU:29128 Ensembl:ENST00000262952 Ensembl:ENST00000398240
Ensembl:ENST00000455180 GeneID:29128 KEGG:hsa:29128 UCSC:uc002mbo.3
GeneCards:GC19P004910 HGNC:HGNC:12556 HPA:HPA049408 MIM:607990
neXtProt:NX_Q96T88 PharmGKB:PA37196 InParanoid:Q96T88
OrthoDB:EOG408N7M EvolutionaryTrace:Q96T88 GenomeRNAi:29128
NextBio:52244 ArrayExpress:Q96T88 CleanEx:HS_UHRF1
Genevestigator:Q96T88 GermOnline:ENSG00000034063 Uniprot:Q96T88
Length = 793
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 75/282 (26%), Positives = 117/282 (41%)
Query: 91 CGGNQKGFPRKGDCPVRCKIQSLDNSFHFNDQNKPIIEVVKPLEVYNGLGNSDREKVKKT 150
CGG Q P K + C D +FH + P+ V E Y +D +V
Sbjct: 321 CGGRQD--PDK---QLMC--DECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASEVVLA 373
Query: 151 LNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKR-LGSIPGVEVGD 209
RE +++ + S + + K + K P G IPG+ VG
Sbjct: 374 GERLRE-----SKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGT 428
Query: 210 KFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIYSGHG-- 267
+++R +++ G+H+ GI G A S+V +G Y +D + + G
Sbjct: 429 MWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDHGNFFTYTGSGGRD 485
Query: 268 --GNPKVSKDAVPEDQKLIQGNLAL----------KNSMEAKT-----PVRVIRGIK--- 307
GN + ++ + DQKL N AL + EAK PVRV+R +K
Sbjct: 486 LSGNKRTAEQSC--DQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGK 543
Query: 308 NLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
N + + N YDG+Y V +YW +G G LV+++LLR
Sbjct: 544 NSKYAPAEGNR----YDGIYKVVKYWPEKGKSGFLVWRYLLR 581
>RGD|1595855 [details] [associations]
symbol:Uhrf1 "ubiquitin-like with PHD and ring finger domains 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0000790 "nuclear chromatin" evidence=ISO;ISS] [GO:0000791
"euchromatin" evidence=ISO;ISS] [GO:0000792 "heterochromatin"
evidence=ISO;ISS] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO] [GO:0005657 "replication fork"
evidence=ISO;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO;ISS] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;ISS]
[GO:0010390 "histone monoubiquitination" evidence=IEA;ISO]
[GO:0016363 "nuclear matrix" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO;ISS] [GO:0031493 "nucleosomal histone
binding" evidence=IEA;ISO] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO;ISS] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 RGD:1595855
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0016574 GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0000791 KO:K10638 Gene3D:2.30.280.10 CTD:29128
HOVERGEN:HBG059298 GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY321334 EMBL:BC099224 IPI:IPI00371346 RefSeq:NP_001008882.1
UniGene:Rn.54318 ProteinModelPortal:Q7TPK1 SMR:Q7TPK1 PRIDE:Q7TPK1
GeneID:316129 KEGG:rno:316129 NextBio:670462 Genevestigator:Q7TPK1
Uniprot:Q7TPK1
Length = 774
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 54/169 (31%), Positives = 81/169 (47%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPGV VG +++R +++ G+H+ GI G A S+V +G Y +D +
Sbjct: 416 GPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDN-GN 471
Query: 260 LLIYSGHGGNP-KVSKDAVPE--DQKLIQGNLAL---------KNSMEAKT-----PVRV 302
Y+G GG +K + DQKL N AL + EA+ PVRV
Sbjct: 472 FFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRV 531
Query: 303 IRGIKNLVAS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
+R +K S + N YDG+Y V +YW +G G +V+++LLR
Sbjct: 532 VRNMKGGKHSKYAPAEGNR---YDGIYKVVKYWPEKGKSGFIVWRYLLR 577
>TAIR|locus:2138591 [details] [associations]
symbol:ORTHL "ORTHRUS-like" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0042393 "histone binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0042393
EMBL:AF076275 GO:GO:0010424 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 GO:GO:0010428 GO:GO:0010429
Gene3D:2.30.280.10 EMBL:AC002983 EMBL:AL161512 EMBL:AK175637
EMBL:BT022101 EMBL:AJ608275 IPI:IPI00536405 IPI:IPI00846324
PIR:T00949 PIR:T01825 RefSeq:NP_001078357.1 RefSeq:NP_192599.2
UniGene:At.33741 UniGene:At.48832 ProteinModelPortal:Q681I0
SMR:Q681I0 PaxDb:Q681I0 PRIDE:Q681I0 EnsemblPlants:AT4G08590.1
GeneID:826420 KEGG:ath:AT4G08590 TAIR:At4g08590 InParanoid:Q681I0
OMA:PPANHEQ PhylomeDB:Q681I0 ProtClustDB:CLSN2918572
Genevestigator:Q681I0 Uniprot:Q681I0
Length = 465
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/145 (33%), Positives = 72/145 (49%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
GV VG+ ++ R E G+H + I E+ G A S+V SG Y +D + + L Y
Sbjct: 237 GVLVGESWENRVECRQWGVHLPHVSCIAGQEDYG---AQSVVISGGYKDDEDHGEWFL-Y 292
Query: 264 SGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNNVVYVY 323
+G + EDQ+ N AL+ S E PVRV+R K+ ++ K V Y
Sbjct: 293 TGRSRGRHFAN----EDQEFEDLNEALRVSCEMGYPVRVVRSYKDRYSAYAPKEGVRY-- 346
Query: 324 DGLYFVERYWQ-ARGPFGNLVFKFL 347
DG+Y +E+ W+ AR P V ++L
Sbjct: 347 DGVYRIEKCWRKARFPDSFKVCRYL 371
>ZFIN|ZDB-GENE-040426-2039 [details] [associations]
symbol:uhrf1 "ubiquitin-like, containing PHD and
RING finger domains, 1" species:7955 "Danio rerio" [GO:0042393
"histone binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0031100 "organ regeneration" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS;IMP]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0000790 "nuclear
chromatin" evidence=ISS] [GO:0000791 "euchromatin" evidence=ISS]
[GO:0000792 "heterochromatin" evidence=ISS] [GO:0044729
"hemi-methylated DNA-binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00299 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2039 GO:GO:0005737 GO:GO:0046872 GO:GO:0031100
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0002088
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY648713 EMBL:BX927276 EMBL:FP360035 EMBL:BC058055
IPI:IPI00497177 RefSeq:NP_998242.1 RefSeq:XP_003201004.1
UniGene:Dr.77703 PRIDE:E7EZF3 Ensembl:ENSDART00000012551
Ensembl:ENSDART00000121555 Ensembl:ENSDART00000122573
Ensembl:ENSDART00000126951 GeneID:100538017 GeneID:406350
KEGG:dre:100538017 KEGG:dre:406350 NextBio:20817968
ArrayExpress:E7EZF3 Bgee:E7EZF3 Uniprot:E7EZF3
Length = 776
Score = 137 (53.3 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 52/169 (30%), Positives = 78/169 (46%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G +PGV VG +++R +++ G+H+ GI G A S+V +G Y +D +
Sbjct: 417 GPVPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDDGNE 473
Query: 260 LLIYSGHG----GNPKVSKDAVPEDQKLIQGNLAL----------KNSMEAKT-----PV 300
G GN + ++ + DQKL N AL K EAK PV
Sbjct: 474 FTYTGSGGRDLSGNKRTAEQSC--DQKLTNMNRALALNCNAAVNDKEGAEAKDWKAGKPV 531
Query: 301 RVIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
RV+R K S + YDG+Y V +YW +G G LV+++LL+
Sbjct: 532 RVVRSSKGRKHSKYSPEDGNR-YDGIYKVVKYWPEKGKSGFLVWRYLLK 579
>UNIPROTKB|B6CHA3 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0000791
"euchromatin" evidence=ISS] [GO:0000792 "heterochromatin"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005657 "replication fork" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0016574 "histone
ubiquitination" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0044729 "hemi-methylated DNA-binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:EU177101
RefSeq:NP_001129236.1 UniGene:Xl.23750 ProteinModelPortal:B6CHA3
GeneID:432234 KEGG:xla:432234 Xenbase:XB-GENE-5821540
Uniprot:B6CHA3
Length = 772
Score = 132 (51.5 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 60/193 (31%), Positives = 87/193 (45%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPGV VG +++R +++ G+H+ GI G S+V +G Y +D +
Sbjct: 417 GPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDGSY---SLVLAGGYEDDVDNGNE 473
Query: 260 LLIYSGHG----GNPKVSKDAVPEDQKLIQGNLALK-------NSME---AKT-----PV 300
G GN + ++ + DQKL N AL N E AK PV
Sbjct: 474 FTYTGSGGRDLSGNKRTAEQSC--DQKLSNMNRALALNCSAPINDKEGSIAKDWRAGKPV 531
Query: 301 RVIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSLGQKDYRL 358
RV+R K S ++ N YDG+Y V +YW +G G LV+++LLR + DY
Sbjct: 532 RVVRNSKGRKHSKYAPEEGNR---YDGIYKVVKYWPEKGKSGFLVWRYLLR---RDDYEP 585
Query: 359 DEMREEQSKSMIK 371
+E K IK
Sbjct: 586 APWSKE-GKERIK 597
Score = 49 (22.3 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 30 VLDSRFGYSGVVDSRLNNTPRTYPARRNLKGFPVNRDFPAGCGGNQR 76
+ D G + +V + P ++P + K ++ D AGCG QR
Sbjct: 58 LFDYSVGLNDIVQLLVRQIPDSFPTKH--KECELS-DASAGCGSGQR 101
>TAIR|locus:2009420 [details] [associations]
symbol:VIM1 "AT1G57820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IPI] [GO:0008327 "methyl-CpG binding" evidence=IDA]
[GO:0010428 "methyl-CpNpG binding" evidence=IDA] [GO:0010429
"methyl-CpNpN binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0010369 "chromocenter" evidence=IDA]
[GO:0010385 "double-stranded methylated DNA binding" evidence=IDA]
[GO:0031508 "centromeric heterochromatin assembly" evidence=IMP]
[GO:0032776 "DNA methylation on cytosine" evidence=IMP] [GO:0006325
"chromatin organization" evidence=IPI] [GO:0051301 "cell division"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000280 "nuclear
division" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0000911 "cytokinesis by
cell plate formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0007000
"nucleolus organization" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009555 "pollen development"
evidence=RCA] [GO:0016444 "somatic cell DNA recombination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 PROSITE:PS51292 SMART:SM00184
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0051301
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 InterPro:IPR017907
GO:GO:0010369 HSSP:Q99728 GO:GO:0031508 GO:GO:0010424 GO:GO:0008327
EMBL:AC079732 GO:GO:0010385 eggNOG:COG3440 HOGENOM:HOG000240700
KO:K10638 ProtClustDB:CLSN2679702 GO:GO:0010428 GO:GO:0010429
GO:GO:0090309 Gene3D:2.30.280.10 EMBL:AY065438 EMBL:AY117235
IPI:IPI00542643 IPI:IPI00544062 PIR:E96612 RefSeq:NP_176092.2
RefSeq:NP_974045.1 UniGene:At.28484 ProteinModelPortal:Q8VYZ0
SMR:Q8VYZ0 STRING:Q8VYZ0 EnsemblPlants:AT1G57820.1 GeneID:842157
KEGG:ath:AT1G57820 TAIR:At1g57820 InParanoid:Q8VYZ0 OMA:RSAYAPE
PhylomeDB:Q8VYZ0 Genevestigator:Q8VYZ0 Uniprot:Q8VYZ0
Length = 645
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/150 (32%), Positives = 73/150 (48%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
G+ VG+ ++ R E G H GI G A S+ SG Y +D + + L Y
Sbjct: 277 GLLVGESWEDRLECRQWGAHFPHVAGIAGQSTYG---AQSVALSGGYKDDEDHGEWFL-Y 332
Query: 264 SGHGG-----NPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNN 318
+G GG N + +K+ DQK + N ALK S + PVRV+R K ++ +
Sbjct: 333 TGSGGRDLSGNKRTNKEQ-SFDQKFEKSNAALKLSCKLGYPVRVVRSHKEKRSAYAPEEG 391
Query: 319 VVYVYDGLYFVERYWQARGPFGNL-VFKFL 347
V Y DG+Y +E+ W+ G G+ V ++L
Sbjct: 392 VRY--DGVYRIEKCWRKVGVQGSFKVCRYL 419
>UNIPROTKB|F1MFX7 [details] [associations]
symbol:F1MFX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071158 "positive regulation of cell cycle arrest"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:DAAA02022659
EMBL:DAAA02022660 EMBL:DAAA02022661 IPI:IPI00687692
Ensembl:ENSBTAT00000027737 Uniprot:F1MFX7
Length = 752
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 53/171 (30%), Positives = 78/171 (45%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPGV VG +++R +++ G+H+ GI G A S+V +G + ++ D
Sbjct: 399 GPIPGVPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG---AYSLVLAGGFADEVDRGDE 455
Query: 260 LLIYSGHGGNPKVSKDAV--PE-DQKLIQGNLAL----------KNSMEAKT-----PVR 301
Y+G GG + P DQ L N AL K E++ PVR
Sbjct: 456 FT-YTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKPVR 514
Query: 302 VIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYW-QARGPFGNLVFKFLLR 349
VIR K S ++ N YDG+Y V +YW + G LV+++LLR
Sbjct: 515 VIRSFKGRKISKYAPEEGNR---YDGIYKVVKYWPEISSSHGFLVWRYLLR 562
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 52/171 (30%), Positives = 78/171 (45%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPG+ VG +++R +++ G+H+ GI G A S+V +G + ++ D
Sbjct: 448 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG---AYSLVLAGGFADEVDRGDE 504
Query: 260 LLIYSGHGGNPKVSKDAV--PE-DQKLIQGNLAL----------KNSMEAKT-----PVR 301
Y+G GG + P DQ L N AL K E++ PVR
Sbjct: 505 FT-YTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKPVR 563
Query: 302 VIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYW-QARGPFGNLVFKFLLR 349
VIR K S ++ N YDG+Y V +YW + G LV+++LLR
Sbjct: 564 VIRSFKGRKISKYAPEEGNR---YDGIYKVVKYWPEISSSHGFLVWRYLLR 611
>UNIPROTKB|E2RKA4 [details] [associations]
symbol:UHRF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0051865
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 InterPro:IPR021991 Pfam:PF12148
CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AAEX03007831
RefSeq:XP_864420.2 ProteinModelPortal:E2RKA4
Ensembl:ENSCAFT00000002134 GeneID:474702 KEGG:cfa:474702
NextBio:20850676 Uniprot:E2RKA4
Length = 803
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 52/171 (30%), Positives = 78/171 (45%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPG+ VG +++R +++ G+H+ GI G A S+V +G + ++ D
Sbjct: 449 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG---AYSLVLAGGFADEVDRGDE 505
Query: 260 LLIYSGHGGNPKVSKDAV--PE-DQKLIQGNLAL----------KNSMEAKT-----PVR 301
Y+G GG + P DQ L N AL K E++ PVR
Sbjct: 506 FT-YTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKPVR 564
Query: 302 VIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYW-QARGPFGNLVFKFLLR 349
VIR K S ++ N YDG+Y V +YW + G LV+++LLR
Sbjct: 565 VIRSFKGRKISKYAPEEGNR---YDGIYKVVKYWPEISSSHGFLVWRYLLR 612
>MGI|MGI:1923718 [details] [associations]
symbol:Uhrf2 "ubiquitin-like, containing PHD and RING finger
domains 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISS] [GO:0042393
"histone binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 MGI:MGI:1923718
Prosite:PS00299 Prosite:PS00518 GO:GO:0030154 GO:GO:0071158
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 eggNOG:COG3440 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 HOGENOM:HOG000124662
HOVERGEN:HBG059298 InterPro:IPR021991 Pfam:PF12148
OrthoDB:EOG408N7M CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AB116653
EMBL:AF274047 EMBL:AK031036 EMBL:AK041564 EMBL:AK042321
EMBL:AK051743 EMBL:AK080925 EMBL:BC060241 IPI:IPI00169767
IPI:IPI00607019 IPI:IPI00757694 RefSeq:NP_659122.2
UniGene:Mm.313364 ProteinModelPortal:Q7TMI3 SMR:Q7TMI3
STRING:Q7TMI3 PhosphoSite:Q7TMI3 PRIDE:Q7TMI3
Ensembl:ENSMUST00000025739 GeneID:109113 KEGG:mmu:109113
UCSC:uc008hef.1 UCSC:uc008heh.1 UCSC:uc008hei.1 InParanoid:Q7TMI3
NextBio:361658 Bgee:Q7TMI3 Genevestigator:Q7TMI3
GermOnline:ENSMUSG00000024817 Uniprot:Q7TMI3
Length = 803
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 52/171 (30%), Positives = 78/171 (45%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPG+ VG +++R +++ G+H+ GI G A S+V +G + ++ D
Sbjct: 449 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG---AYSLVLAGGFEDEVDRGDE 505
Query: 260 LLIYSGHGGNPKVSKDAV--PE-DQKLIQGNLAL----------KNSMEAKT-----PVR 301
Y+G GG + P DQ L N AL K E++ PVR
Sbjct: 506 FT-YTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKPVR 564
Query: 302 VIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYW-QARGPFGNLVFKFLLR 349
VIR K S ++ N YDG+Y V +YW + G LV+++LLR
Sbjct: 565 VIRSFKGRKISKYAPEEGNR---YDGIYKVVKYWPEISSSHGFLVWRYLLR 612
>RGD|1309990 [details] [associations]
symbol:Uhrf2 "ubiquitin-like with PHD and ring finger domains 2,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005720 "nuclear
heterochromatin" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 RGD:1309990
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0005720 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0051865 Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:CH473953
Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M CTD:115426 KO:K15713 IPI:IPI00213897
RefSeq:NP_001101055.1 UniGene:Rn.2173 Ensembl:ENSRNOT00000015406
GeneID:309331 KEGG:rno:309331 UCSC:RGD:1309990 NextBio:660596
Uniprot:D3ZK36
Length = 803
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 52/171 (30%), Positives = 78/171 (45%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPG+ VG +++R +++ G+H+ GI G A S+V +G + ++ D
Sbjct: 449 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG---AYSLVLAGGFEDEVDRGDE 505
Query: 260 LLIYSGHGGNPKVSKDAV--PE-DQKLIQGNLAL----------KNSMEAKT-----PVR 301
Y+G GG + P DQ L N AL K E++ PVR
Sbjct: 506 FT-YTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKPVR 564
Query: 302 VIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYW-QARGPFGNLVFKFLLR 349
VIR K S ++ N YDG+Y V +YW + G LV+++LLR
Sbjct: 565 VIRSFKGRKISKYAPEEGNR---YDGIYKVVKYWPEISSSHGFLVWRYLLR 612
>UNIPROTKB|F6UA42 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000791 "euchromatin" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005657 "replication fork"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0010216
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GO:GO:0044729 InterPro:IPR021991
Pfam:PF12148 EMBL:AAMC01100082 EMBL:AAMC01100083 EMBL:AAMC01100084
EMBL:AAMC01100085 EMBL:AAMC01100086 EMBL:AAMC01100087
RefSeq:XP_002940183.1 GeneID:100491405 KEGG:xtr:100491405
Xenbase:XB-GENE-5821474 Bgee:F6UA42 Uniprot:F6UA42
Length = 775
Score = 131 (51.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 53/169 (31%), Positives = 76/169 (44%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPGV VG +++R +++ G+H+ GI G S+V +G Y +D
Sbjct: 419 GPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDGSY---SLVLAGGYEDDVDNGSE 475
Query: 260 LLIYSGHG----GNPKVSKDAVPEDQKLIQGNLALK-------NSME---AKT-----PV 300
G GN + ++ + DQKL N AL N E AK PV
Sbjct: 476 FTYTGSGGRDLSGNKRTAEQSC--DQKLTNMNRALALNCSAPINDKEGAVAKDWRAGKPV 533
Query: 301 RVIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
RV+R K S + YDG+Y V +YW +G G LV+++LLR
Sbjct: 534 RVVRNTKGKKHSKYAPEDGNR-YDGIYKVVKYWPEKGKSGFLVWRYLLR 581
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 102 GDCPVRCKIQSLDNSFHFNDQNKPIIEVVKPLEVYNG 138
GD C+I+ +D + + I P + NG
Sbjct: 263 GDSLNDCRIRFVDEIYKIEEPGSAYITTESPQKRQNG 299
>UNIPROTKB|F1NS44 [details] [associations]
symbol:F1NS44 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:AADN02037704
EMBL:AADN02066291 EMBL:AADN02066292 EMBL:AADN02066293
EMBL:AADN02066294 EMBL:AADN02066295 EMBL:AADN02066296
EMBL:AADN02066297 EMBL:AADN02066298 EMBL:AADN02066299
IPI:IPI00589861 Ensembl:ENSGALT00000024273 Uniprot:F1NS44
Length = 755
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 54/173 (31%), Positives = 76/173 (43%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGG--KLLATSIVESGRYTNDGGYC 257
G IPGV VG +++R +++ G+H+ GI G L+ ES D G
Sbjct: 405 GPIPGVPVGTTWKFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLPGDFES--CIRDRG-- 460
Query: 258 DHLLIYSGHG----GNPKVSKDAVPEDQKLIQGNLAL----------KNSMEAKT----- 298
D G GN ++ + + DQ L N AL KN E+K
Sbjct: 461 DEFTYTGSGGRDLSGNKRIGEHSF--DQTLTHMNRALALNCDAPLDDKNGAESKNWRAGK 518
Query: 299 PVRVIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
PVRV+R K S ++ N YDG+Y V +YW G G LV+++LLR
Sbjct: 519 PVRVVRSSKGRRISKYAPEEGNR---YDGIYKVVKYWPEIGKCGFLVWRYLLR 568
>TAIR|locus:2013800 [details] [associations]
symbol:VIM4 "VARIANT IN METHYLATION 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR001965 InterPro:IPR003105
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
PROSITE:PS51292 SMART:SM00184 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC026480 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907
HSSP:P38398 GO:GO:0010424 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10 IPI:IPI00535924
PIR:H96684 RefSeq:NP_176778.1 UniGene:At.35808 UniGene:At.48345
ProteinModelPortal:Q9C8E1 SMR:Q9C8E1 STRING:Q9C8E1
EnsemblPlants:AT1G66040.1 GeneID:842917 KEGG:ath:AT1G66040
TAIR:At1g66040 InParanoid:Q9C8E1 OMA:RMESPSW PhylomeDB:Q9C8E1
Genevestigator:Q9C8E1 Uniprot:Q9C8E1
Length = 622
Score = 117 (46.2 bits), Expect = 0.00095, P = 0.00095
Identities = 46/142 (32%), Positives = 65/142 (45%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
GV VG+ ++ R E G+H GI G A S+ SG Y +D + + L Y
Sbjct: 262 GVLVGESWEDRQECRQWGVHFPHVAGIAGQAAVG---AQSVALSGGYDDDEDHGEWFL-Y 317
Query: 264 SGHGG-----NPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNN 318
+G GG N +V+K DQ N AL+ S + PVRV+R K ++
Sbjct: 318 TGSGGRDLSGNKRVNK-IQSSDQAFKNMNEALRLSCKMGYPVRVVRSWKEKRSAYAPAEG 376
Query: 319 VVYVYDGLYFVERYWQARGPFG 340
V Y DG+Y +E+ W G G
Sbjct: 377 VRY--DGVYRIEKCWSNVGVQG 396
>TAIR|locus:2013840 [details] [associations]
symbol:VIM2 "VARIANT IN METHYLATION 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0032776 "DNA methylation on
cytosine" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR001965
InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS51015 PROSITE:PS51292 SMART:SM00184 SMART:SM00249
SMART:SM00466 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AC026480 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393
InterPro:IPR017907 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 GO:GO:0090309 Gene3D:2.30.280.10
UniGene:At.35808 UniGene:At.48345 EMBL:BT010568 EMBL:AK175694
EMBL:AK175887 EMBL:AK176012 IPI:IPI00541483 PIR:A96685
RefSeq:NP_176779.2 ProteinModelPortal:Q680I0 SMR:Q680I0
STRING:Q680I0 EnsemblPlants:AT1G66050.1 GeneID:842919
KEGG:ath:AT1G66050 TAIR:At1g66050 InParanoid:Q680I0
PhylomeDB:Q680I0 Genevestigator:Q680I0 Uniprot:Q680I0
Length = 623
Score = 117 (46.2 bits), Expect = 0.00095, P = 0.00095
Identities = 46/142 (32%), Positives = 65/142 (45%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
GV VG+ ++ R E G+H GI G A S+ SG Y +D + + L Y
Sbjct: 262 GVLVGESWEDRQECRQWGVHFPHVAGIAGQAAVG---AQSVALSGGYDDDEDHGEWFL-Y 317
Query: 264 SGHGG-----NPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNN 318
+G GG N +V+K DQ N AL+ S + PVRV+R K ++
Sbjct: 318 TGSGGRDLSGNKRVNK-IQSSDQAFKNMNEALRLSCKMGYPVRVVRSWKEKRSAYAPAEG 376
Query: 319 VVYVYDGLYFVERYWQARGPFG 340
V Y DG+Y +E+ W G G
Sbjct: 377 VRY--DGVYRIEKCWSNVGVQG 396
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.139 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 391 391 0.00094 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 610 (65 KB)
Total size of DFA: 269 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.75u 0.10s 33.85t Elapsed: 00:00:01
Total cpu time: 33.76u 0.10s 33.86t Elapsed: 00:00:01
Start: Fri May 10 23:44:32 2013 End: Fri May 10 23:44:33 2013