BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016310
         (391 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3Q0C|X Chain X, Crystal Structure Of Suvh5 Sra-Fully Methylated Cg Dna
           Complex In Space Group P6122
 pdb|3Q0C|A Chain A, Crystal Structure Of Suvh5 Sra-Fully Methylated Cg Dna
           Complex In Space Group P6122
 pdb|3Q0F|X Chain X, Crystal Structure Of Suvh5 Sra- Methylated Chh Dna Complex
 pdb|3Q0F|A Chain A, Crystal Structure Of Suvh5 Sra- Methylated Chh Dna Complex
 pdb|3Q0D|X Chain X, Crystal Structure Of Suvh5 Sra- Hemi Methylated Cg Dna
           Complex
 pdb|3Q0D|A Chain A, Crystal Structure Of Suvh5 Sra- Hemi Methylated Cg Dna
           Complex
          Length = 167

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 114/157 (72%), Gaps = 8/157 (5%)

Query: 199 LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM-EEGGKLLATSIVESGRYTNDGGYC 257
           +G++PGVEVGD+FQ+R E+ ++G+H+   +GIDYM ++GG+L+ATSIV SG Y ND    
Sbjct: 3   IGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKDDGGELVATSIVSSGGY-NDVLDN 61

Query: 258 DHLLIYSGHGGN-PKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKN--LVASVM 314
             +LIY+G GGN  K   +  P+DQ+L+ GNLALKNS+  K PVRVIRGIKN  L +SV+
Sbjct: 62  SDVLIYTGQGGNVGKKKNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSVV 121

Query: 315 KKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL 351
            KN   YVYDGLY VE YW+  G  G LVFKF LR +
Sbjct: 122 AKN---YVYDGLYLVEEYWEETGSHGKLVFKFKLRRI 155


>pdb|3Q0B|X Chain X, Crystal Structure Of Suvh5 Sra- Fully Methylated Cg Dna
           Complex In Space Group P42212
          Length = 167

 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/157 (55%), Positives = 113/157 (71%), Gaps = 8/157 (5%)

Query: 199 LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM-EEGGKLLATSIVESGRYTNDGGYC 257
           +G++PGVEVGD+FQ+R E+ ++G+H+   +GIDY  ++GG+L+ATSIV SG Y ND    
Sbjct: 3   IGTVPGVEVGDEFQYRXELNLLGIHRPSQSGIDYXKDDGGELVATSIVSSGGY-NDVLDN 61

Query: 258 DHLLIYSGHGGN-PKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKN--LVASVM 314
             +LIY+G GGN  K   +  P+DQ+L+ GNLALKNS+  K PVRVIRGIKN  L +SV+
Sbjct: 62  SDVLIYTGQGGNVGKKKNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSVV 121

Query: 315 KKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL 351
            KN   YVYDGLY VE YW+  G  G LVFKF LR +
Sbjct: 122 AKN---YVYDGLYLVEEYWEETGSHGKLVFKFKLRRI 155


>pdb|2PB7|A Chain A, Crystal Structure Of The Sra Domain Of The Human Uhrf1
           Protein
          Length = 239

 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 81/173 (46%), Gaps = 33/173 (19%)

Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
           G IPG+ VG  +++R +++  G+H+    GI      G   A S+V +G Y +D    DH
Sbjct: 15  GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDD---VDH 68

Query: 260 --LLIYSGHGGNPKVSKDAVPE---DQKLIQGNLAL----------KNSMEAKT-----P 299
                Y+G GG          E   DQKL   N AL          +   EAK      P
Sbjct: 69  GNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKP 128

Query: 300 VRVIR---GIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
           VRV+R   G KN   +  + N     YDG+Y V +YW  +G  G LV+++LLR
Sbjct: 129 VRVVRNVKGGKNSKYAPAEGNR----YDGIYKVVKYWPEKGKSGFLVWRYLLR 177


>pdb|3BI7|A Chain A, Crystal Structure Of The Sra Domain Of E3
           Ubiquitin-Protein Ligase Uhrf1
          Length = 212

 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 81/173 (46%), Gaps = 33/173 (19%)

Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
           G IPG+ VG  +++R +++  G+H+    GI      G   A S+V +G Y +D    DH
Sbjct: 7   GPIPGIPVGTXWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDD---VDH 60

Query: 260 --LLIYSGHGGNPKVSKDAVPE---DQKLIQGNLAL----------KNSMEAKT-----P 299
                Y+G GG          E   DQKL   N AL          +   EAK      P
Sbjct: 61  GNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKP 120

Query: 300 VRVIR---GIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
           VRV+R   G KN   +  + N     YDG+Y V +YW  +G  G LV+++LLR
Sbjct: 121 VRVVRNVKGGKNSKYAPAEGNR----YDGIYKVVKYWPEKGKSGFLVWRYLLR 169


>pdb|3CLZ|A Chain A, The Set And Ring Associated (Sra) Domain Of Uhrf1 Bound To
           Methylated Dna
 pdb|3CLZ|B Chain B, The Set And Ring Associated (Sra) Domain Of Uhrf1 Bound To
           Methylated Dna
 pdb|3CLZ|C Chain C, The Set And Ring Associated (Sra) Domain Of Uhrf1 Bound To
           Methylated Dna
 pdb|3CLZ|D Chain D, The Set And Ring Associated (Sra) Domain Of Uhrf1 Bound To
           Methylated Dna
          Length = 212

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 81/173 (46%), Gaps = 33/173 (19%)

Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
           G IPG+ VG  +++R +++  G+H+    GI      G   A S+V +G Y +D    DH
Sbjct: 7   GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDD---VDH 60

Query: 260 --LLIYSGHGGNPKVSKDAVPE---DQKLIQGNLAL----------KNSMEAKT-----P 299
                Y+G GG          E   DQKL   N AL          +   EAK      P
Sbjct: 61  GNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKP 120

Query: 300 VRVIR---GIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
           VRV+R   G KN   +  + N     YDG+Y V +YW  +G  G LV+++LLR
Sbjct: 121 VRVVRNVKGGKNSKYAPAEGNR----YDGIYKVVKYWPEKGKSGFLVWRYLLR 169


>pdb|3DWH|A Chain A, Structural And Functional Analysis Of Sra Domain
          Length = 208

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 81/173 (46%), Gaps = 33/173 (19%)

Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
           G IPG+ VG  +++R +++  G+H+    GI      G   A S+V +G Y +D    DH
Sbjct: 10  GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDD---VDH 63

Query: 260 --LLIYSGHGGNPKVSKDAVPE---DQKLIQGNLAL----------KNSMEAKT-----P 299
                Y+G GG          E   DQKL   N AL          +   EAK      P
Sbjct: 64  GNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKP 123

Query: 300 VRVIR---GIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
           VRV+R   G KN   +  + N     YDG+Y V +YW  +G  G LV+++LLR
Sbjct: 124 VRVVRNVKGGKNSKYAPAEGNR----YDGIYKVVKYWPEKGKSGFLVWRYLLR 172


>pdb|2ZKD|A Chain A, Crystal Structure Of The Sra Domain Of Mouse Np95 In
           Complex With Hemi-Methylated Cpg Dna
 pdb|2ZKD|B Chain B, Crystal Structure Of The Sra Domain Of Mouse Np95 In
           Complex With Hemi-Methylated Cpg Dna
 pdb|2ZKE|A Chain A, Crystal Structure Of The Sra Domain Of Mouse Np95 In
           Complex With Hemi-Methylated Cpg Dna
 pdb|2ZKF|A Chain A, Crystal Structure Of The Sra Domain Of Mouse Np95 In
           Complex With Hemi-Methylated Cpg Dna
 pdb|2ZKG|A Chain A, Crystal Structure Of Unliganded Sra Domain Of Mouse Np95
 pdb|2ZKG|B Chain B, Crystal Structure Of Unliganded Sra Domain Of Mouse Np95
 pdb|2ZKG|C Chain C, Crystal Structure Of Unliganded Sra Domain Of Mouse Np95
 pdb|2ZKG|D Chain D, Crystal Structure Of Unliganded Sra Domain Of Mouse Np95
          Length = 210

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 36/175 (20%)

Query: 199 LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTND---GG 255
            G IPGV VG  +++R +++  G+H+    GI      G   A S+V +G Y +D   G 
Sbjct: 20  FGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDNGN 76

Query: 256 YCDHLLIYSGHGG-----NPKVSKDAVPEDQKLIQGNLAL---------KNSMEAKT--- 298
           Y      Y+G GG     N + +  +   DQKL   N AL         +   EA+    
Sbjct: 77  Y----FTYTGSGGRDLSGNKRTAGQS--SDQKLTNNNRALALNCHSPINEKGAEAEDWRQ 130

Query: 299 --PVRVIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
             PVRV+R +K    S     + N    YDG+Y V +YW  RG  G LV+++LLR
Sbjct: 131 GKPVRVVRNMKGGKHSKYAPAEGNR---YDGIYKVVKYWPERGKSGFLVWRYLLR 182


>pdb|2ZO0|B Chain B, Mouse Np95 Sra Domain Dna Specific Complex 1
 pdb|2ZO1|B Chain B, Mouse Np95 Sra Domain Dna Specific Complex 2
 pdb|2ZO2|B Chain B, Mouse Np95 Sra Domain Non-Specific Dna Complex
 pdb|3F8I|A Chain A, Mouse Uhrf1 Sra Domain Bound With Hemi-Methylated Cpg,
           Crystal Structure In Space Group P21
 pdb|3F8I|B Chain B, Mouse Uhrf1 Sra Domain Bound With Hemi-Methylated Cpg,
           Crystal Structure In Space Group P21
 pdb|3FDE|A Chain A, Mouse Uhrf1 Sra Domain Bound With Hemi-Methylated Cpg Dna,
           Crystal Structure In Space Group C222(1) At 1.4 A
           Resolution
 pdb|3FDE|B Chain B, Mouse Uhrf1 Sra Domain Bound With Hemi-Methylated Cpg Dna,
           Crystal Structure In Space Group C222(1) At 1.4 A
           Resolution
          Length = 212

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 36/175 (20%)

Query: 199 LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTND---GG 255
            G IPGV VG  +++R +++  G+H+    GI      G   A S+V +G Y +D   G 
Sbjct: 7   FGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDNGN 63

Query: 256 YCDHLLIYSGHGG-----NPKVSKDAVPEDQKLIQGNLAL---------KNSMEAK---- 297
           Y      Y+G GG     N + +  +   DQKL   N AL         +   EA+    
Sbjct: 64  Y----FTYTGSGGRDLSGNKRTAGQS--SDQKLTNNNRALALNCHSPINEKGAEAEDWRQ 117

Query: 298 -TPVRVIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
             PVRV+R +K    S     + N    YDG+Y V +YW  RG  G LV+++LLR
Sbjct: 118 GKPVRVVRNMKGGKHSKYAPAEGNR---YDGIYKVVKYWPERGKSGFLVWRYLLR 169


>pdb|3F8J|B Chain B, Mouse Uhrf1 Sra Domain Bound With Hemi-methylated Cpg,
           Crystal Structure In Space Group C222(1)
          Length = 212

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 36/175 (20%)

Query: 199 LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTND---GG 255
            G IPGV VG  +++R +++  G+H+    GI      G   A S+V +G Y +D   G 
Sbjct: 7   FGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDNGN 63

Query: 256 YCDHLLIYSGHGG-----NPKVSKDAVPEDQKLIQGNLAL---------KNSMEAK---- 297
           Y      Y+G GG     N + +  +   DQKL   N AL         +   EA+    
Sbjct: 64  Y----FTYTGSGGRDLSGNKRTAGQS--SDQKLTNNNRALALNCHSPINEKGAEAEDWRQ 117

Query: 298 -TPVRVIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
             PVRV+R +K    S     + N    YDG+Y V +YW  RG  G LV+++LLR
Sbjct: 118 GKPVRVVRNMKGGKHSKYAPAEGNR---YDGIYKVVKYWPERGKSGFLVWRYLLR 169


>pdb|3OLN|A Chain A, Crystal Structure Of The Sra Domain Of E3
           Ubiquitin-Protein Ligase Uhrf2
 pdb|3OLN|B Chain B, Crystal Structure Of The Sra Domain Of E3
           Ubiquitin-Protein Ligase Uhrf2
          Length = 231

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)

Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
           G IPG+ VG  +++R +++  G+H+    GI      G   A S+V +G + ++    D 
Sbjct: 31  GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG---AYSLVLAGGFADEVDRGDE 87

Query: 260 LLIYSGHG-----GNPKVSKDAVPEDQKLIQGNLAL---------------KNSMEAKTP 299
              Y+G G     GN ++   A   DQ L   N AL                 +  A  P
Sbjct: 88  -FTYTGSGGKNLAGNKRIG--APSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKP 144

Query: 300 VRVIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYW-QARGPFGNLVFKFLLR 349
           VRVIR  K    S    ++ N    YDG+Y V +YW +     G LV+++LLR
Sbjct: 145 VRVIRSFKGRKISKYAPEEGN---RYDGIYKVVKYWPEISSSHGFLVWRYLLR 194


>pdb|4DIU|A Chain A, Crystal Structure Of Engineered Protein. Northeast
           Structural Genomics Consortium Target Or94
          Length = 248

 Score = 31.6 bits (70), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 248 GRYTNDGGYCDHLLIYSGHGGNPKVSKDAVPED--QKLIQGNLALKNSMEAKTPV 300
           GR+    GY  H  IYSGHG  P+      PE   Q ++ G   LKN    K  V
Sbjct: 35  GRFLESKGYTCHAPIYSGHGVPPEALTRFGPEAWWQDVMNGYEFLKNKGYEKIAV 89


>pdb|1TQH|A Chain A, Covalent Reaction Intermediate Revealed In Crystal
           Structure Of The Geobacillus Stearothermophilus
           Carboxylesterase Est30
          Length = 247

 Score = 30.8 bits (68), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 248 GRYTNDGGYCDHLLIYSGHGGNPKVSKDAVPED--QKLIQGNLALKNSMEAKTPV 300
           GR+    GY  H  IY GHG  P+      P+D  Q ++ G   LKN    K  V
Sbjct: 36  GRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAV 90


>pdb|2YEW|B Chain B, Modeling Barmah Forest Virus Structural Proteins
 pdb|2YEW|E Chain E, Modeling Barmah Forest Virus Structural Proteins
 pdb|2YEW|H Chain H, Modeling Barmah Forest Virus Structural Proteins
 pdb|2YEW|K Chain K, Modeling Barmah Forest Virus Structural Proteins
          Length = 427

 Score = 30.0 bits (66), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)

Query: 38  SGVVDSRLNNTPRTYPARRNLKGFPVNRDFPAGCGGNQRILKVFPIKRD 86
           SG V      TP  +   +  KG P+NR+ P GC     I+KV P++ +
Sbjct: 221 SGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGC-----IIKVNPVRAE 264


>pdb|1R1D|A Chain A, Structure Of A Carboxylesterase From Bacillus
           Stearothermophilus
 pdb|1R1D|B Chain B, Structure Of A Carboxylesterase From Bacillus
           Stearothermophilus
          Length = 247

 Score = 30.0 bits (66), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 248 GRYTNDGGYCDHLLIYSGHGGNPKVSKDAVPED--QKLIQGNLALKNSMEAKTPV 300
           GR+    GY  H  IY GHG  P+      P+D  Q +  G   LKN    K  V
Sbjct: 36  GRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVXNGYQFLKNKGYEKIAV 90


>pdb|1KQA|A Chain A, Galactoside Acetyltransferase In Complex With Coenzyme A
 pdb|1KQA|B Chain B, Galactoside Acetyltransferase In Complex With Coenzyme A
 pdb|1KQA|C Chain C, Galactoside Acetyltransferase In Complex With Coenzyme A
 pdb|1KRR|A Chain A, Galactoside Acetyltransferase In Complex With Acetyl-
           Coenzyme A
 pdb|1KRR|B Chain B, Galactoside Acetyltransferase In Complex With Acetyl-
           Coenzyme A
 pdb|1KRR|C Chain C, Galactoside Acetyltransferase In Complex With Acetyl-
           Coenzyme A
 pdb|1KRU|A Chain A, Galactoside Acetyltransferase In Complex With Iptg And
           Coenzyme A
 pdb|1KRU|B Chain B, Galactoside Acetyltransferase In Complex With Iptg And
           Coenzyme A
 pdb|1KRU|C Chain C, Galactoside Acetyltransferase In Complex With Iptg And
           Coenzyme A
 pdb|1KRV|A Chain A, Galactoside Acetyltransferase In Complex With Coa And Pnp-
           Beta-Gal
 pdb|1KRV|B Chain B, Galactoside Acetyltransferase In Complex With Coa And Pnp-
           Beta-Gal
 pdb|1KRV|C Chain C, Galactoside Acetyltransferase In Complex With Coa And Pnp-
           Beta-Gal
          Length = 203

 Score = 29.3 bits (64), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 15/60 (25%), Positives = 22/60 (36%)

Query: 161 LMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKRLGSIPGVEVGDKFQWRFEMTII 220
           LM E  H H  +    + L K       E  W+  P        + +G  F   F +TI+
Sbjct: 32  LMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIV 91


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.139    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,987,966
Number of Sequences: 62578
Number of extensions: 598652
Number of successful extensions: 1126
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1098
Number of HSP's gapped (non-prelim): 21
length of query: 391
length of database: 14,973,337
effective HSP length: 101
effective length of query: 290
effective length of database: 8,652,959
effective search space: 2509358110
effective search space used: 2509358110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)