BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016310
(391 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5
OS=Arabidopsis thaliana GN=SUVH5 PE=1 SV=1
Length = 794
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Query: 140 GNSDREKVKKTLNLFREVVSVLMQEQEHEHAGKSGTH-KILFKAAKLLKDE-KRWINTPK 197
G+S R KVK+T+ LF E +MQE+E + G + K++ +A+K+LK + K + +
Sbjct: 303 GDSARYKVKETMRLFHETCKKIMQEEEARPRKRDGGNFKVVCEASKILKSKGKNLYSGTQ 362
Query: 198 RLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM-EEGGKLLATSIVESGRYTNDGGY 256
+G++PGVEVGD+FQ+R E+ ++G+H+ +GIDYM ++GG+L+ATSIV SG Y ND
Sbjct: 363 IIGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKDDGGELVATSIVSSGGY-NDVLD 421
Query: 257 CDHLLIYSGHGGN-PKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKN--LVASV 313
+LIY+G GGN K + P+DQ+L+ GNLALKNS+ K PVRVIRGIKN L +SV
Sbjct: 422 NSDVLIYTGQGGNVGKKKNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSV 481
Query: 314 MKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL 351
+ KN YVYDGLY VE YW+ G G LVFKF LR +
Sbjct: 482 VAKN---YVYDGLYLVEEYWEETGSHGKLVFKFKLRRI 516
>sp|Q8VZ17|SUVH6_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6
OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2
Length = 790
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 141/239 (58%), Gaps = 23/239 (9%)
Query: 144 REKVKKTLNLFREVVSVLMQEQE---HEHAGKSGTHKILFKAAKLLKDEKRWINTPKR-L 199
R KVK+TL LF V ++QE E + K +I F+A+ +LK +++N+ L
Sbjct: 270 RNKVKETLRLFHGVCRKILQEDEAKPEDQRRKGKGLRIDFEASTILKRNGKFLNSGVHIL 329
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G +PGVEVGD+FQ+R E+ I+G+H+ GIDYM+ G +ATSIV S GGY DH
Sbjct: 330 GEVPGVEVGDEFQYRMELNILGIHKPSQAGIDYMKYGKAKVATSIVAS------GGYDDH 383
Query: 260 L-----LIYSGHGGN-----PKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNL 309
L L Y+G GGN K + PEDQKLI GNLAL S+E +TPVRVIRG
Sbjct: 384 LDNSDVLTYTGQGGNVMQVKKKGEELKEPEDQKLITGNLALATSIEKQTPVRVIRGKHKS 443
Query: 310 VASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL-GQKDYRLDEMREEQSK 367
K N YVYDGLY VE+YWQ G G VFKF LR + GQ + E+++ +SK
Sbjct: 444 THDKSKGGN--YVYDGLYLVEKYWQQVGSHGMNVFKFQLRRIPGQPELSWVEVKKSKSK 500
>sp|Q9LVU3|YDG2_ARATH YDG domain-containing protein At5g47160 OS=Arabidopsis thaliana
GN=At5g47160 PE=2 SV=1
Length = 415
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 145/239 (60%), Gaps = 12/239 (5%)
Query: 118 HFNDQNKPIIEVVKPLEVYNGLGNSDREKVKKTLNLFREVVSVLMQEQEHEHAG-KSGTH 176
H +++ ++ V++ + L + R+KV++ L +F V L + + G ++
Sbjct: 181 HKDERRSGVLSVIQRNRLSKDL--TPRQKVQEVLRIFTLVFDELDRNKAARRGGSETAKS 238
Query: 177 KILFKAAKLLKDEKRWINTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEG 236
+I ++ +L++ +N+ KR+GS+PG++VGDK Q++ +++IGLH +GIDYM +G
Sbjct: 239 RIDYQTWTILREMGMQVNSQKRIGSVPGIKVGDKIQFKAALSVIGLHFGIMSGIDYMYKG 298
Query: 237 GKLLATSIVESGRYTNDGG--YCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSM 294
K +ATSIV S ND G + + ++IY G GGN + +DQKL+ GNLAL NS+
Sbjct: 299 NKEVATSIVSS--EGNDYGDRFINDVMIYCGQGGNMRSKDHKAIKDQKLVGGNLALANSI 356
Query: 295 EAKTPVRVIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSLGQ 353
+ KTPVRVIRG + L YVYDGLY VE+YW+ RGP GN++FKF LR Q
Sbjct: 357 KEKTPVRVIRGERRL-----DNRGKDYVYDGLYRVEKYWEERGPQGNILFKFKLRRTCQ 410
>sp|Q9FHI0|YDG1_ARATH YDG domain-containing protein At5g47150 OS=Arabidopsis thaliana
GN=At5g47150 PE=2 SV=1
Length = 328
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 164/324 (50%), Gaps = 57/324 (17%)
Query: 80 VFPIKRDFPVGCGGN-----------QKGF--PRKGDCP-------------VRCKIQSL 113
VF I RDFP GCG + +K F PR GD K +S
Sbjct: 8 VFAI-RDFPPGCGTHIDVSSSLNHPAEKAFKHPRTGDVSGENLSFAEAKPEGTCLKRESA 66
Query: 114 DNSFHF-----NDQNKPIIE--VVKPLEVYNG---------LGNSD-----REKVKKTLN 152
D F N + +P + VV V +GNSD REKV + L+
Sbjct: 67 DQDHIFAAPEHNAKREPAGQDHVVAATTVAYATSSHRQKVEIGNSDCDPTPREKVLEVLS 126
Query: 153 LFREVVSVLMQEQEHEHAGK--SGTHKILFKAAKLLKDEKRWINTPKRLGSIPGVEVGDK 210
LF++V + L ++++ G T +I K +L+ + +NT KR+GS+PG+ +GD
Sbjct: 127 LFKQVYNQLDRDKKARRGGDFLDATSRIDLKTLTVLEKMGKQVNTEKRIGSVPGINIGDV 186
Query: 211 FQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIYSGHGGNP 270
FQ++ E+ ++GLH + GIDY++ G + TSIV S Y + Y +++Y+G GGN
Sbjct: 187 FQYKTELRVVGLHSKPMCGIDYIKLGDDRITTSIVASEGYGYNDTYNSGVMVYTGEGGNV 246
Query: 271 KVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNNVVYVYDGLYFVE 330
++K EDQKL++GNLAL SM K+ VRVIRG + L + YVYDGLY VE
Sbjct: 247 -INKQKKTEDQKLVKGNLALATSMRQKSQVRVIRGEERL-----DRKGKRYVYDGLYMVE 300
Query: 331 RYWQARGPFGNLVFKF-LLRSLGQ 353
YW R G V+KF L R GQ
Sbjct: 301 EYWVERDVRGKSVYKFKLCRIPGQ 324
>sp|Q9FF80|SUVH1_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1
OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1
Length = 670
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 118/218 (54%), Gaps = 13/218 (5%)
Query: 141 NSDREKVKKTLNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKRLG 200
N +RE V L F + Q ++ + A + K+ NT KR G
Sbjct: 152 NGNRELVLSVLMRFDALRRRFAQLEDAKEAVSGIIKRPDLKSGSTCMGRGVRTNTKKRPG 211
Query: 201 SIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKL----LATSIVESGRYTNDGGY 256
+PGVE+GD F +RFEM ++GLH GIDY+ G+ +ATSIV SG Y ND G
Sbjct: 212 IVPGVEIGDVFFFRFEMCLVGLHSPSMAGIDYLVVKGETEEEPIATSIVSSGYYDNDEGN 271
Query: 257 CDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKK 316
D +LIY+G GGN KD DQKL +GNLAL+ S+ + VRVIRG+K
Sbjct: 272 PD-VLIYTGQGGN--ADKDKQSSDQKLERGNLALEKSLRRDSAVRVIRGLKE-----ASH 323
Query: 317 NNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQ 353
N +Y+YDGLY ++ W +G G+ FK+ L+R+ GQ
Sbjct: 324 NAKIYIYDGLYEIKESWVEKGKSGHNTFKYKLVRAPGQ 361
>sp|O22781|SUVH2_ARATH Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4
lysine-20 and cytosine specific SUVH2 OS=Arabidopsis
thaliana GN=SUVH2 PE=1 SV=1
Length = 651
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 131/242 (54%), Gaps = 21/242 (8%)
Query: 144 REKVKKTLNLFREVVSVLMQEQEHEHA-GKSGTHKILFKAAKLLKDEKRWINTPKRL-GS 201
R+ +K+T + + LM E H G+ + AA +++D W+N K + G
Sbjct: 149 RQVMKRTRMTYESLRIHLMAESMKNHVLGQGRRRRSDMAAAYIMRDRGLWLNYDKHIVGP 208
Query: 202 IPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM----EEGGKLLATSIVESGRYTNDGGYC 257
+ GVEVGD F +R E+ ++GLH Q GID + G+ +ATSIV SG Y +D
Sbjct: 209 VTGVEVGDIFFYRMELCVLGLHGQTQAGIDCLTAERSATGEPIATSIVVSGGYEDDEDTG 268
Query: 258 DHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIK--NLVASVMK 315
D +L+Y+GHGG K ++Q+L+ GNL ++ SM VRVIRGIK N ++S
Sbjct: 269 D-VLVYTGHGGQDHQHKQC--DNQRLVGGNLGMERSMHYGIEVRVIRGIKYENSISS--- 322
Query: 316 KNNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQKDYRLDEMREEQSKSMIKNKP 374
VYVYDGLY + +W A G G VFKF L+R GQ MR Q+ ++NKP
Sbjct: 323 ---KVYVYDGLYKIVDWWFAVGKSGFGVFKFRLVRIEGQPMMGSAVMRFAQT---LRNKP 376
Query: 375 LM 376
M
Sbjct: 377 SM 378
>sp|Q9C5P4|SUVH3_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3
OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2
Length = 669
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 146/283 (51%), Gaps = 29/283 (10%)
Query: 82 PIKRDFPVGCGGNQKGFPR-KGDCPVRCK-IQSLDNSFHFNDQNKPIIEVVKPL--EVYN 137
P K + P G ++G R KG V+ K +++ N + + ++VVK + +
Sbjct: 95 PTKTNGPSSSSGTKRGVGRPKGTTSVKKKEKKTVANEPNLD------VQVVKKFSSDFDS 148
Query: 138 GLGNSDREKVKKTLNLFREVVSVLMQ--EQEHEHAGKSGTHKILFKAAKLLKDEKRWINT 195
G+ ++RE L V SVLM+ + T KAA L N
Sbjct: 149 GISAAEREDGNAYL-----VSSVLMRFDAVRRRLSQVEFTKSATSKAAGTLMSNGVRTNM 203
Query: 196 PKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDY-MEEGG---KLLATSIVESGRYT 251
KR+G++PG+EVGD F R EM ++GLH Q GIDY + + G + LATSIV SGRY
Sbjct: 204 KKRVGTVPGIEVGDIFFSRIEMCLVGLHMQTMAGIDYIISKAGSDEESLATSIVSSGRYE 263
Query: 252 NDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVA 311
+ + LIYSG GGN ++ A DQKL +GNLAL+NS+ VRV+RG ++ +
Sbjct: 264 GEAQDPES-LIYSGQGGNADKNRQA--SDQKLERGNLALENSLRKGNGVRVVRGEEDAAS 320
Query: 312 SVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQ 353
K +Y+YDGLY + W +G G FK+ L+R GQ
Sbjct: 321 KTGK----IYIYDGLYSISESWVEKGKSGCNTFKYKLVRQPGQ 359
>sp|Q9T0G7|SUVH9_ARATH Probable histone-lysine N-methyltransferase, H3 lysine-9 specific
SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=2 SV=1
Length = 650
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 32/229 (13%)
Query: 144 REKVKKTLNLFREVVSVLMQEQEHEHA---------GKSGTHKILFKAAKLLKDEKRWIN 194
RE V+KT ++ + LM E+ + GK+G KA +++D W+N
Sbjct: 145 REHVRKTRMIYDSLRMFLMMEEAKRNGVGGRRARADGKAG------KAGSMMRDCMLWMN 198
Query: 195 TPKRL-GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDY----MEEGGKLLATSIVESGR 249
KR+ GSIPGV+VGD F +RFE+ ++GLH +GID+ + G+ +ATS++ SG
Sbjct: 199 RDKRIVGSIPGVQVGDIFFFRFELCVMGLHGHPQSGIDFLTGSLSSNGEPIATSVIVSGG 258
Query: 250 YTNDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIK-- 307
Y +D D +++Y+G GG ++ + A E Q+L GNLA++ SM VRVIRG+K
Sbjct: 259 YEDDDDQGD-VIMYTGQGGQDRLGRQA--EHQRLEGGNLAMERSMYYGIEVRVIRGLKYE 315
Query: 308 NLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL-GQKD 355
N V+S VYVYDGL+ + W G G VFK+ L + GQ +
Sbjct: 316 NEVSS------RVYVYDGLFRIVDSWFDVGKSGFGVFKYRLERIEGQAE 358
>sp|Q8GZB6|SUVH4_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2
Length = 624
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 117/226 (51%), Gaps = 25/226 (11%)
Query: 146 KVKKTLNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKRL-GSIPG 204
KV K L LF + + +Q + K T I KA I P+++ G +PG
Sbjct: 104 KVTKCLRLFNKQYLLCVQAKLSRPDLKGVTEMIKAKA----------ILYPRKIIGDLPG 153
Query: 205 VEVGDKFQWRFEMTIIGLHQQFNNGIDYME-------EGGKL-LATSIVESGRYTNDGGY 256
++VG +F R EM +G H + NGIDYM KL LA SIV SG+Y +D
Sbjct: 154 IDVGHRFFSRAEMCAVGFHNHWLNGIDYMSMEYEKEYSNYKLPLAVSIVMSGQYEDDLDN 213
Query: 257 CDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKK 316
D + Y+G GG+ +DQ L +GNLALK+ E PVRV RG N +S K+
Sbjct: 214 AD-TVTYTGQGGHNLTGNKRQIKDQLLERGNLALKHCCEYNVPVRVTRG-HNCKSSYTKR 271
Query: 317 NNVVYVYDGLYFVERYWQARGPFGNLVFKFLLRSL-GQKDYRLDEM 361
VY YDGLY VE++W +G G V+K+ L+ L GQ + D++
Sbjct: 272 ---VYTYDGLYKVEKFWAQKGVSGFTVYKYRLKRLEGQPELTTDQV 314
>sp|Q93YF5|SUVH1_TOBAC Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1
OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1
Length = 704
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 119/221 (53%), Gaps = 13/221 (5%)
Query: 140 GNSDREKVKKTLNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPKRL 199
+ D+E + L +F + Q E SG L KA+ +L + N KR+
Sbjct: 206 ADGDKELAGRVLLVFDLFRRRMTQIDESRDGPGSGRRPDL-KASNMLMTKGVRTNQTKRI 264
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKL----LATSIVESGRYTNDGG 255
G+ PG+EVGD F +R E+ ++GLH GIDYM + LA SIV SG Y +DGG
Sbjct: 265 GNAPGIEVGDIFFFRMELCLVGLHAPTMAGIDYMSVKLTMDEEPLAVSIVSSGGYDDDGG 324
Query: 256 YCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMK 315
+LIY+G GG + KD DQKL +GNLAL+ S+ VRVIRG+K++ K
Sbjct: 325 D-GDVLIYTGQGGVQR--KDGQVFDQKLERGNLALEKSVHRANEVRVIRGVKDVAYPTGK 381
Query: 316 KNNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQKD 355
+Y+YDGLY ++ W + G VFK+ LLR GQ +
Sbjct: 382 ----IYIYDGLYKIQESWAEKNKVGCNVFKYKLLRVPGQPE 418
>sp|Q9C5P0|SUVH8_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8
OS=Arabidopsis thaliana GN=SUVH8 PE=3 SV=1
Length = 755
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 193 INTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYM--EEGG--KLLATSIVESG 248
N +R+G IPGV+VGD F + EM ++GLH+ GID + +E G ATS+V SG
Sbjct: 303 TNMTRRIGPIPGVQVGDIFYYWCEMCLVGLHRNTAGGIDSLLAKESGVDGPAATSVVTSG 362
Query: 249 RYTNDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKN 308
+Y N+ + LIYSGHGG P DQ L +GN AL+ S+ + VRVIRG
Sbjct: 363 KYDNETEDLE-TLIYSGHGGKPC--------DQVLQRGNRALEASVRRRNEVRVIRG--- 410
Query: 309 LVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKF-LLRSLGQ 353
+ N VY+YDGLY V WQ G G ++F LLR GQ
Sbjct: 411 ----ELYNNEKVYIYDGLYLVSDCWQVTGKSGFKEYRFKLLRKPGQ 452
>sp|Q9C5P1|SUVH7_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7
OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1
Length = 693
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 194 NTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLL----ATSIVESGR 249
NT +R+G++PG+ VGD F + EM ++GLH+ GID+ + A +V +G+
Sbjct: 221 NTRRRIGAVPGIHVGDIFYYWGEMCLVGLHKSNYGGIDFFTAAESAVEGHAAMCVVTAGQ 280
Query: 250 YTNDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNL 309
Y + D LIYSG GG V +A DQ++ GNLAL+ S+ VRV+RG
Sbjct: 281 YDGETEGLD-TLIYSGQGGT-DVYGNA--RDQEMKGGNLALEASVSKGNDVRVVRG---- 332
Query: 310 VASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLL 348
V + N +Y+YDG+Y V ++W G G F+F L
Sbjct: 333 VIHPHENNQKIYIYDGMYLVSKFWTVTGKSGFKEFRFKL 371
>sp|Q3EC60|SUVHA_ARATH Putative histone-lysine N-methyltransferase, H3 lysine-9 specific
SUVH10 OS=Arabidopsis thaliana GN=SUVH10 PE=3 SV=1
Length = 312
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 217 MTIIGLHQ-----QFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIYSGHGGNPK 271
M ++GLH +F D+ +E GK +A S++ SG+ + D L I++G GG
Sbjct: 1 MGLVGLHSGTIDMEFIGVEDHGDEEGKQIAVSVISSGKNADKTEDPDSL-IFTGFGGTDM 59
Query: 272 VSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNNVVYVYDGLYFVER 331
P +QKL + N+ L+ + K+ VRV+R +K+ + N +Y+YDG Y +
Sbjct: 60 YH--GQPCNQKLERLNIPLEAAFRKKSIVRVVRCMKD----EKRTNGNIYIYDGTYMITN 113
Query: 332 YWQARGPFGNLVFKF-LLRSLGQK 354
W+ G G +VFKF L+R QK
Sbjct: 114 RWEEEGQNGFIVFKFKLVREPDQK 137
>sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1
SV=1
Length = 793
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 114/283 (40%), Gaps = 46/283 (16%)
Query: 91 CGGNQKGFPRKGDCPVRCKIQSLDNSFHFNDQNKPIIEVVKPLEVYNGLGNSDREKVKKT 150
CGG Q D + D +FH + P+ V E Y +D +V
Sbjct: 321 CGGRQ-------DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASEVVLA 373
Query: 151 LNLFREVVSVLMQEQEHEHAGKSGTHKILFKAAKLLKDEKRWINTPK-RLGSIPGVEVGD 209
RE +++ + S + + K + K P G IPG+ VG
Sbjct: 374 GERLRE-----SKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGT 428
Query: 210 KFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH--LLIYSGHG 267
+++R +++ G+H+ GI G A S+V +G Y +D DH Y+G G
Sbjct: 429 MWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDD---VDHGNFFTYTGSG 482
Query: 268 GNPKVSKDAVPE---DQKLIQGNLAL----------KNSMEAKT-----PVRVIRGIK-- 307
G E DQKL N AL + EAK PVRV+R +K
Sbjct: 483 GRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGG 542
Query: 308 -NLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
N + + N YDG+Y V +YW +G G LV+++LLR
Sbjct: 543 KNSKYAPAEGNR----YDGIYKVVKYWPEKGKSGFLVWRYLLR 581
>sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1
Length = 786
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 84/176 (47%), Gaps = 37/176 (21%)
Query: 199 LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCD 258
G IPG+ VG +++R +++ G+H+ GI G A S+V +G Y +D D
Sbjct: 422 FGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNHG---AYSLVLAGGYEDD---VD 475
Query: 259 H--LLIYSGHGG-----NPKVSKDAVPEDQKLIQGNLALK----------NSMEAKT--- 298
H Y+G GG N + ++ + DQKL N AL EAK
Sbjct: 476 HGNSFTYTGSGGRDLSGNKRTAEQSC--DQKLTNTNRALALNCFAPINDLKGAEAKDWRS 533
Query: 299 --PVRVIRGIKNLVASV---MKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
PVRV+R +K S ++ N YDG+Y V RYW +G G LV++FLLR
Sbjct: 534 GKPVRVVRNVKGRKHSKYAPIEGNR----YDGIYKVVRYWPEKGKSGFLVWRFLLR 585
>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1
SV=2
Length = 782
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 81/173 (46%), Gaps = 32/173 (18%)
Query: 199 LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTND---GG 255
G IPGV VG +++R +++ G+H+ GI G A S+V +G Y +D G
Sbjct: 423 FGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDNGN 479
Query: 256 YCDHLLIYSGHGG-----NPKVSKDAVPEDQKLIQGNLAL---------KNSMEAKT--- 298
Y Y+G GG N + + + DQKL N AL + EA+
Sbjct: 480 Y----FTYTGSGGRDLSGNKRTAGQS--SDQKLTNNNRALALNCHSPINEKGAEAEDWRQ 533
Query: 299 --PVRVIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
PVRV+R +K S YDG+Y V +YW RG G LV+++LLR
Sbjct: 534 GKPVRVVRNMKGGKHSKYAPAEGNR-YDGIYKVVKYWPERGKSGFLVWRYLLR 585
>sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1
Length = 776
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G +PGV VG +++R +++ G+H+ GI G A S+V +G Y +D +
Sbjct: 417 GPVPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDDGNE 473
Query: 260 LLIYSGHGG-----NPKVSKDAVPEDQKLIQGNLAL----------KNSMEAKT-----P 299
Y+G GG N + ++ + DQKL N AL K EAK P
Sbjct: 474 F-TYTGSGGRDLSGNKRTAEQSC--DQKLTNMNRALALNCNAAVNDKEGAEAKDWKAGKP 530
Query: 300 VRVIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
VRV+R K S + YDG+Y V +YW +G G LV+++LL+
Sbjct: 531 VRVVRSSKGRKHSKYSPEDGNR-YDGIYKVVKYWPEKGKSGFLVWRYLLK 579
>sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1
PE=2 SV=2
Length = 774
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Query: 199 LGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCD 258
G IPGV VG +++R +++ G+H+ GI G A S+V +G Y +D
Sbjct: 415 FGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG---AYSLVLAGGYEDDVDN-G 470
Query: 259 HLLIYSGHGG-----NPKVSKDAVPEDQKLIQGNLAL---------KNSMEAKT-----P 299
+ Y+G GG N + + + DQKL N AL + EA+ P
Sbjct: 471 NFFTYTGSGGRDLSGNKRTAGQS--SDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKP 528
Query: 300 VRVIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
VRV+R +K S YDG+Y V +YW +G G +V+++LLR
Sbjct: 529 VRVVRNMKGGKHSKYAPAEGNR-YDGIYKVVKYWPEKGKSGFIVWRYLLR 577
>sp|Q5QD03|SUVH3_CHLRE Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3
OS=Chlamydomonas reinhardtii GN=SUVH3 PE=2 SV=1
Length = 957
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 104/259 (40%), Gaps = 40/259 (15%)
Query: 116 SFHFNDQNKPIIEVVKPLEVYNGLGNSDREKVKKTLNLFREVVSVLMQEQEHEHAGKSGT 175
+ DQ + ++ V L + ++K+K+ L+ + + + K G
Sbjct: 3 TIQLTDQQRKVLHEVACTTAAPVLDTASKDKIKQLLDDYDMRKAAM--------GSKPGA 54
Query: 176 HKILFKAAKLLKDEKRWINTPKRLGSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEE 235
+ +L ++L + +++ G PGV +GDKF+ R ++ + G+H GI
Sbjct: 55 NMVL--PGQVLGEAGPFLD----YGHPPGVALGDKFKDRGQVMVAGVHGTTVRGIHAPNA 108
Query: 236 GGKLL---ATSIVESGRYTNDGGYCDHLLIYSGHGGNPKVSKDAVPEDQKLIQGNLALKN 292
G + A S++ SG Y +D + Y+G GG K V + Q N ALKN
Sbjct: 109 GSEHFVRGAYSVLMSGVYVDDEDMGEAFW-YTGEGGMD--GKKQVKDQQMASGSNAALKN 165
Query: 293 SMEAKTPVRVIRGI--------------------KNLVASVMKKNNVVYVYDGLYFVERY 332
+ + +TPVRV+RG K K VY+GLY V
Sbjct: 166 NCDTRTPVRVVRGFVQEAGGGEGGGGGEGGGGAKKGKGGKGGGKKEKGLVYEGLYLVLEC 225
Query: 333 WQARGPFGNLVFKFLLRSL 351
G V KFL+ L
Sbjct: 226 KMEPSKDGPQVCKFLMHGL 244
>sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1
PE=3 SV=2
Length = 775
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPGV VG +++R +++ G+H+ GI G + S+V +G Y +D
Sbjct: 419 GPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG---SYSLVLAGGYEDDVDNGSE 475
Query: 260 LLIYSGHGGNPKVSKDAVPE---DQKLIQGNLALK---------------NSMEAKTPVR 301
Y+G GG E DQKL N AL A PVR
Sbjct: 476 F-TYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALALNCSAPINDKEGAVAKDWRAGKPVR 534
Query: 302 VIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
V+R K S + YDG+Y V +YW +G G LV+++LLR
Sbjct: 535 VVRNTKGKKHSKYAPEDGNR-YDGIYKVVKYWPEKGKSGFLVWRYLLR 581
>sp|Q681I0|ORTHL_ARATH E3 ubiquitin-protein ligase ORTHRUS-LIKE 1 OS=Arabidopsis thaliana
GN=ORTHL PE=2 SV=1
Length = 465
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
GV VG+ ++ R E G+H + I E+ G A S+V SG Y +D + + L Y
Sbjct: 237 GVLVGESWENRVECRQWGVHLPHVSCIAGQEDYG---AQSVVISGGYKDDEDHGEWFL-Y 292
Query: 264 SGHGGNPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNNVVYVY 323
+G + EDQ+ N AL+ S E PVRV+R K+ ++ K V Y
Sbjct: 293 TGRSRGRHFAN----EDQEFEDLNEALRVSCEMGYPVRVVRSYKDRYSAYAPKEGV--RY 346
Query: 324 DGLYFVERYW-QARGPFGNLVFKFLL 348
DG+Y +E+ W +AR P V ++L
Sbjct: 347 DGVYRIEKCWRKARFPDSFKVCRYLF 372
>sp|B6CHA3|UHRF1_XENLA E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2
SV=1
Length = 772
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPGV VG +++R +++ G+H+ GI G + S+V +G Y +D +
Sbjct: 417 GPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG---SYSLVLAGGYEDDVDNGNE 473
Query: 260 LLIYSGHGGNPKVSKDAVPE---DQKLIQGNLALK---------------NSMEAKTPVR 301
Y+G GG E DQKL N AL A PVR
Sbjct: 474 F-TYTGSGGRDLSGNKRTAEQSCDQKLSNMNRALALNCSAPINDKEGSIAKDWRAGKPVR 532
Query: 302 VIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYWQARGPFGNLVFKFLLR 349
V+R K S ++ N YDG+Y V +YW +G G LV+++LLR
Sbjct: 533 VVRNSKGRKHSKYAPEEGNR---YDGIYKVVKYWPEKGKSGFLVWRYLLR 579
>sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana
GN=ORTH2 PE=1 SV=1
Length = 645
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 196 PKRLGSIP---------GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVE 246
P G IP G+ VG+ ++ R E G H GI G A S+
Sbjct: 260 PDHFGPIPAENDPVRNQGLLVGESWEDRLECRQWGAHFPHVAGIAGQSTYG---AQSVAL 316
Query: 247 SGRYTNDGGYCDHLLIYSGHGG-----NPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVR 301
SG Y +D + +Y+G GG N + +K+ DQK + N ALK S + PVR
Sbjct: 317 SGGYKDDEDH-GEWFLYTGSGGRDLSGNKRTNKEQS-FDQKFEKSNAALKLSCKLGYPVR 374
Query: 302 VIRGIKNLVASVMKKNNVVYVYDGLYFVERYWQARGPFGNL-VFKFLL 348
V+R K ++ + V YDG+Y +E+ W+ G G+ V ++L
Sbjct: 375 VVRSHKEKRSAYAPEEGV--RYDGVYRIEKCWRKVGVQGSFKVCRYLF 420
>sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1
SV=1
Length = 802
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPG+ VG +++R +++ G+H+ GI G A S+V +G + ++ D
Sbjct: 448 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG---AYSLVLAGGFADEVDRGDE 504
Query: 260 LLIYSGHG-----GNPKVSKDAVPEDQKLIQGNLAL---------------KNSMEAKTP 299
Y+G G GN ++ A DQ L N AL + A P
Sbjct: 505 -FTYTGSGGKNLAGNKRIG--APSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKP 561
Query: 300 VRVIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYW-QARGPFGNLVFKFLLR 349
VRVIR K S ++ N YDG+Y V +YW + G LV+++LLR
Sbjct: 562 VRVIRSFKGRKISKYAPEEGN---RYDGIYKVVKYWPEISSSHGFLVWRYLLR 611
>sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1
SV=1
Length = 803
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 200 GSIPGVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDH 259
G IPG+ VG +++R +++ G+H+ GI G A S+V +G + ++ D
Sbjct: 449 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG---AYSLVLAGGFEDEVDRGDE 505
Query: 260 LLIYSGHG-----GNPKVSKDAVPEDQKLIQGNLAL---------------KNSMEAKTP 299
Y+G G GN ++ A DQ L N AL + A P
Sbjct: 506 -FTYTGSGGKNLAGNKRIG--APSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKP 562
Query: 300 VRVIRGIKNLVAS--VMKKNNVVYVYDGLYFVERYW-QARGPFGNLVFKFLLR 349
VRVIR K S ++ N YDG+Y V +YW + G LV+++LLR
Sbjct: 563 VRVIRSFKGRKISKYAPEEGN---RYDGIYKVVKYWPEISSSHGFLVWRYLLR 612
>sp|Q680I0|ORTH5_ARATH E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana
GN=ORTH5 PE=2 SV=1
Length = 623
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
GV VG+ ++ R E G+H GI G A S+ SG Y +D + + L Y
Sbjct: 262 GVLVGESWEDRQECRQWGVHFPHVAGIAGQAAVG---AQSVALSGGYDDDEDHGEWFL-Y 317
Query: 264 SGHGG-----NPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNN 318
+G GG N +V+K DQ N AL+ S + PVRV+R K ++
Sbjct: 318 TGSGGRDLSGNKRVNK-IQSSDQAFKNMNEALRLSCKMGYPVRVVRSWKEKRSAYAPAEG 376
Query: 319 VVYVYDGLYFVERYWQARGPFG 340
V Y DG+Y +E+ W G G
Sbjct: 377 VRY--DGVYRIEKCWSNVGVQG 396
>sp|Q9C8E1|ORTH4_ARATH Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis
thaliana GN=ORTH4 PE=3 SV=1
Length = 622
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
GV VG+ ++ R E G+H GI G A S+ SG Y +D + + L Y
Sbjct: 262 GVLVGESWEDRQECRQWGVHFPHVAGIAGQAAVG---AQSVALSGGYDDDEDHGEWFL-Y 317
Query: 264 SGHGG-----NPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNN 318
+G GG N +V+K DQ N AL+ S + PVRV+R K ++
Sbjct: 318 TGSGGRDLSGNKRVNK-IQSSDQAFKNMNEALRLSCKMGYPVRVVRSWKEKRSAYAPAEG 376
Query: 319 VVYVYDGLYFVERYWQARGPFG 340
V Y DG+Y +E+ W G G
Sbjct: 377 VRY--DGVYRIEKCWSNVGVQG 396
>sp|Q9FKA7|ORTH1_ARATH E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana
GN=ORTH1 PE=1 SV=1
Length = 617
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
GV VG+ ++ R E G H GI G A S+ SG Y +D + + L Y
Sbjct: 262 GVLVGESWEDRQECRQWGAHFPHIAGIAGQSAVG---AQSVALSGGYDDDEDHGEWFL-Y 317
Query: 264 SGHGG-----NPKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNN 318
+G GG N +++K DQ N +L+ S + PVRV+R K ++
Sbjct: 318 TGSGGRDLSGNKRINKKQS-SDQAFKNMNESLRLSCKMGYPVRVVRSWKEKRSAYAPAEG 376
Query: 319 VVYVYDGLYFVERYWQARGPFGNL-VFKFLL 348
V Y DG+Y +E+ W G G+ V ++L
Sbjct: 377 VRY--DGVYRIEKCWSNVGVQGSFKVCRYLF 405
>sp|Q9FVS2|ORTH3_ARATH E3 ubiquitin-protein ligase ORTHRUS 3 OS=Arabidopsis thaliana
GN=ORTH3 PE=3 SV=2
Length = 660
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 204 GVEVGDKFQWRFEMTIIGLHQQFNNGIDYMEEGGKLLATSIVESGRYTNDGGYCDHLLIY 263
G+ VG+ ++ R G H +GI G A S+V +G Y +D + + L Y
Sbjct: 289 GLLVGESWKGRLACRQWGAHFPHVSGIAGQASYG---AQSVVLAGGYDDDEDHGEWFL-Y 344
Query: 264 SGHGGN----PKVSKDAVPEDQKLIQGNLALKNSMEAKTPVRVIRGIKNLVASVMKKNNV 319
+G GG K + DQ + N AL+ S + PVRV+R K+ + + +
Sbjct: 345 TGSGGRILKGNKRTNTVQAFDQVFLNFNEALRLSCKLGYPVRVVRSTKDKRSPYAPQGGL 404
Query: 320 VYVYDGLYFVERYWQARG 337
+ YDG+Y +E+ W+ G
Sbjct: 405 LR-YDGVYRIEKCWRIVG 421
>sp|B8D7E1|SYP_BUCAT Proline--tRNA ligase OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain Tuc7) GN=proS PE=3 SV=1
Length = 572
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 14/95 (14%)
Query: 272 VSKDAVPEDQKLIQGNLALKNSMEAKTP----------VRVIRGIKNLVASVMKKNNVVY 321
SKD +P D K+I L +++ M KT +RV++ IKN++ + M+K N +
Sbjct: 10 TSKD-IPYDAKIISHQLMIRSGMIRKTSSGLYVWLPTGMRVLKKIKNIITTEMEKINALE 68
Query: 322 VYDGLYFVERYWQARG---PFGNLVFKFLLRSLGQ 353
+ + E W+ G +G + +FL R Q
Sbjct: 69 ILMPIIQPEYLWKESGRLNLYGEELLRFLDRRKNQ 103
>sp|B8D937|SYP_BUCA5 Proline--tRNA ligase OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain 5A) GN=proS PE=3 SV=1
Length = 572
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 14/95 (14%)
Query: 272 VSKDAVPEDQKLIQGNLALKNSMEAKTP----------VRVIRGIKNLVASVMKKNNVVY 321
SKD +P D K+I L +++ M KT +RV++ IKN++ + M+K N +
Sbjct: 10 TSKD-IPYDAKIISHQLMIRSGMIRKTSSGLYVWLPTGMRVLKKIKNIITTEMEKINALE 68
Query: 322 VYDGLYFVERYWQARG---PFGNLVFKFLLRSLGQ 353
+ + E W+ G +G + +FL R Q
Sbjct: 69 ILMPIIQPEYLWKESGRLNLYGEELLRFLDRRKNQ 103
>sp|Q2YXR9|MUTS_STAAB DNA mismatch repair protein MutS OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=mutS PE=3 SV=1
Length = 872
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 118 HFNDQNKPIIEV--VKPLEVYNGLGNSDREKVKKTLNLFREVVSVLMQEQEHEHAGKSGT 175
HFND+ + E+ + P EV SD +K+ +N+ E ++V ++
Sbjct: 153 HFNDEATLLNEITTINPNEVVINDNISDH--LKRQINMVTETITVRETLSSEIYSVNQTE 210
Query: 176 HKILFKAAKLLKD 188
HK++F+A +LL D
Sbjct: 211 HKLMFQATQLLLD 223
>sp|O76840|PPN1_CAEEL Papilin OS=Caenorhabditis elegans GN=mig-6 PE=1 SV=1
Length = 2167
Score = 32.7 bits (73), Expect = 5.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 90 GCGGNQKGFPRKGDCPVRCKIQSL 113
GCGGN F K DC C++++L
Sbjct: 1822 GCGGNGNAFSSKADCESLCRVETL 1845
>sp|P57333|SYP_BUCAI Proline--tRNA ligase OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=proS PE=3 SV=1
Length = 572
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 272 VSKDAVPEDQKLIQGNLALKNSMEAKTP----------VRVIRGIKNLVASVMKKNNVVY 321
SKD +P D K+I L +++ M KT +RV++ IKN++ + M+K N +
Sbjct: 10 TSKD-IPYDAKIISHQLMIRSGMIRKTSSGLYVWLPTGMRVLKKIKNIITTEMEKINALE 68
Query: 322 VYDGLYFVERYWQAR---GPFGNLVFKFLLRSLGQ 353
+ + E W+ +G + +FL R Q
Sbjct: 69 ILMPIIQPEYLWKESRRLNLYGEELLRFLDRRKNQ 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,578,774
Number of Sequences: 539616
Number of extensions: 7419874
Number of successful extensions: 15091
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 14992
Number of HSP's gapped (non-prelim): 62
length of query: 391
length of database: 191,569,459
effective HSP length: 119
effective length of query: 272
effective length of database: 127,355,155
effective search space: 34640602160
effective search space used: 34640602160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)