Query         016311
Match_columns 391
No_of_seqs    155 out of 1161
Neff          9.1 
Searched_HMMs 29240
Date          Mon Mar 25 11:27:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016311.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016311hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3le2_A Serpin-ZX; apoplast, gl 100.0 8.6E-89 2.9E-93  659.3  38.0  386    1-390     3-393 (393)
  2 4ga7_A Leukocyte elastase inhi 100.0 1.7E-86 5.8E-91  641.0  35.4  371    3-388    11-389 (389)
  3 2h4r_A MENT, heterochromatin-a 100.0 6.1E-85 2.1E-89  636.2  38.2  375    2-390     5-415 (415)
  4 3f5n_A Neuroserpin; cleaved fo 100.0 1.1E-85 3.9E-90  638.3  32.3  370    3-389    16-395 (407)
  5 3kcg_I Antithrombin-III, ATIII 100.0 8.5E-86 2.9E-90  642.1  30.3  378    3-390    48-431 (432)
  6 3ne4_A Alpha-1-antitrypsin; se 100.0 1.3E-84 4.5E-89  631.7  38.1  365    3-390    53-423 (424)
  7 1uhg_A Ovalbumin, S-ovalbumin; 100.0 9.5E-85 3.2E-89  629.8  36.3  365    6-388     3-385 (385)
  8 3sto_A Serine protease inhibit 100.0 5.8E-85   2E-89  633.7  34.2  374    4-390    13-404 (406)
  9 1wz9_A Maspin precursor; serpi 100.0 8.1E-85 2.8E-89  627.7  34.7  366    4-388     2-375 (375)
 10 3nda_A Serpin-2; vaccination t 100.0 1.5E-84   5E-89  625.5  35.7  367    3-387     4-376 (377)
 11 2arr_A Plasminogen activator i 100.0   2E-84 6.7E-89  626.9  34.7  368    5-388     3-382 (382)
 12 2ceo_A Thyroxine-binding globu 100.0 6.5E-84 2.2E-88  622.3  37.7  369    3-390     3-378 (379)
 13 2zv6_A Serpin B3; serine prote 100.0 1.6E-84 5.5E-89  630.1  33.3  368    5-388    14-401 (401)
 14 1lj5_A Plasminogen activator i 100.0 1.7E-84 5.8E-89  626.3  32.0  370    1-388     3-379 (379)
 15 4au2_A HSP47, serpin peptidase 100.0 5.8E-84   2E-88  624.8  35.6  366    4-389     7-376 (392)
 16 4dy0_A GLIA-derived nexin; ser 100.0 7.3E-84 2.5E-88  621.9  33.9  369    2-388     4-379 (379)
 17 2vdx_A Corticosteroid-binding  100.0   2E-83 6.9E-88  617.6  36.8  364    3-389     4-373 (373)
 18 1sek_A Serpin K; serine protea 100.0 1.5E-83 5.1E-88  619.1  34.7  369    3-388     8-378 (378)
 19 3pzf_A Serpin 2; protease inhi 100.0 2.6E-83 8.9E-88  618.8  35.7  369    7-390    19-397 (397)
 20 3f1s_A Protein Z-dependent pro 100.0 2.2E-83 7.6E-88  619.4  35.1  366    3-390    13-384 (385)
 21 3ozq_A Serpin48; SPE, hydrolas 100.0 3.3E-83 1.1E-87  615.8  35.8  364    2-389     7-376 (376)
 22 4ajt_A Protein Z-dependent pro 100.0 3.3E-83 1.1E-87  621.8  35.4  364    4-390    56-426 (427)
 23 1yxa_A Serine (OR cysteine) pr 100.0 7.6E-83 2.6E-87  617.8  33.7  367    3-389    24-398 (398)
 24 1qmn_A AACT, alpha-1-antichymo 100.0 2.6E-83 8.9E-88  621.6  29.7  367    5-390    26-400 (401)
 25 3b9f_I Protein C inhibitor; mi 100.0 3.7E-82 1.3E-86  611.9  34.3  363    3-388    26-395 (395)
 26 1jmo_A HC-II, heparin cofactor 100.0 8.5E-82 2.9E-86  618.4  34.5  364    3-390   104-479 (480)
 27 2v95_A Corticosteroid-binding  100.0 4.2E-82 1.5E-86  607.5  31.6  361    2-389     5-371 (371)
 28 2pef_A Serine protease inhibit 100.0 1.6E-82 5.5E-87  611.3  28.5  364    5-389     8-373 (373)
 29 2wxy_C Angiotensinogen, serpin 100.0 1.2E-80 4.2E-85  609.9  36.5  365    4-390    71-451 (453)
 30 1imv_A PEDF, pigment epitheliu 100.0   3E-81   1E-85  606.1  31.7  360    3-390    31-397 (398)
 31 1sng_A COG4826: serine proteas 100.0 1.2E-80 4.1E-85  596.8  30.4  358    1-390     5-365 (370)
 32 2wxw_A Angiotensinogen, serpin 100.0 5.1E-80 1.8E-84  605.4  29.2  363    4-390    72-451 (453)
 33 2r9y_A Alpha-2-antiplasmin; in 100.0 1.2E-78 4.2E-83  590.2  34.2  357    2-390    17-377 (430)
 34 2oay_A C1-inhibitor, plasma pr 100.0 5.5E-77 1.9E-81  575.3  29.5  352    4-389    30-389 (390)
 35 1hle_A Horse leukocyte elastas 100.0 5.5E-74 1.9E-78  546.7  28.9  331    3-346     2-340 (345)
 36 3f02_A Neuroserpin; cleaved fo 100.0 1.7E-74   6E-79  551.9  25.1  330    3-347    16-355 (359)
 37 3ndd_A Alpha-1-antitrypsin; se 100.0 4.4E-73 1.5E-77  539.7  31.7  326    3-347     8-339 (343)
 38 2h4p_A MENT, heterochromatin-a 100.0 4.2E-73 1.4E-77  548.4  30.9  330    3-346    26-391 (394)
 39 3dy0_A N-terminus plasma serin 100.0 8.6E-73 2.9E-77  535.9  29.5  321    7-346     6-332 (336)
 40 2xn6_A Thyroxine-binding globu 100.0 2.1E-72 7.1E-77  536.1  30.4  331    3-352     8-345 (350)
 41 4afx_A Protein Z dependent pro 100.0   4E-72 1.4E-76  538.5  28.1  327    3-348    51-384 (387)
 42 1as4_A Antichymotrypsin, ACT;  100.0 6.1E-72 2.1E-76  531.4  28.9  325    3-346     4-336 (341)
 43 1mtp_A Serine proteinase inhib 100.0 1.6E-70 5.4E-75  517.6  24.5  316    1-346     1-318 (323)
 44 1f0c_A ICE inhibitor; apoptosi 100.0 2.2E-67 7.6E-72  492.3  26.4  294   15-346     1-299 (305)
 45 1m93_B Serine proteinase inhib 100.0 7.2E-56 2.5E-60  401.4  20.7  237   90-345     2-243 (245)
 46 1m93_A Serine proteinase inhib  99.5 5.5E-14 1.9E-18   95.1   4.6   51   15-66      1-51  (55)
 47 3ndd_B Alpha-1-antitrypsin; se  99.4 5.5E-13 1.9E-17   81.4   5.5   33  358-390     3-35  (36)
 48 2riv_B Thyroxine-binding globu  99.4 5.4E-13 1.8E-17   83.5   5.3   33  358-390     7-39  (40)
 49 2xn6_B Thyroxine-binding globu  99.4 5.9E-13   2E-17   80.8   5.3   32  359-390     3-34  (35)
 50 1hle_B Horse leukocyte elastas  99.4 6.2E-13 2.1E-17   78.5   5.1   30  359-388     2-31  (31)
 51 4afx_B Protein Z dependent pro  99.4 6.6E-13 2.3E-17   81.1   5.3   32  359-390     4-35  (36)
 52 2h4p_B MENT, heterochromatin-a  99.4 8.1E-13 2.8E-17   79.8   5.2   32  359-390     3-34  (34)
 53 1as4_B Antichymotrypsin, ACT;   99.4 5.6E-13 1.9E-17   81.9   4.3   33  358-390     4-36  (37)
 54 1m93_C Serine proteinase inhib  99.2 9.5E-12 3.3E-16   78.2   5.2   32  358-390     9-40  (41)
 55 3f02_C Neuroserpin; cleaved fo  99.2 1.3E-11 4.5E-16   80.2   5.9   33  358-390     5-37  (48)
 56 1mtp_B Serine proteinase inhib  99.2 2.9E-11   1E-15   76.6   5.3   31  358-390     8-38  (43)
 57 3dy0_B C-terminus plasma serin  99.1 8.9E-11   3E-15   67.8   4.5   27  359-388     3-29  (29)

No 1  
>3le2_A Serpin-ZX; apoplast, glycoprotein, protease inhibitor, secreted, serine protease inhibitor, hydrolase; 2.20A {Arabidopsis thaliana} SCOP: e.1.1.0
Probab=100.00  E-value=8.6e-89  Score=659.30  Aligned_cols=386  Identities=63%  Similarity=1.041  Sum_probs=347.6

Q ss_pred             CchhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHH
Q 016311            1 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVV   80 (391)
Q Consensus         1 ~~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l   80 (391)
                      ||+++.+.++++||++||+++.....+++|++|||+||+.+|+|+++||+|+|++||.++||++..++++..++.+...+
T Consensus         3 ~~~~~~~~~~~~Fa~~L~~~l~~~~~~~~Ni~~SP~Si~~aLaml~~GA~G~T~~ql~~~L~~~~~~~~~~~~~~l~~~l   82 (393)
T 3le2_A            3 MDVRESISLQNQVSMNLAKHVITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNSFSSEIVSAV   82 (393)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEECHHHHHHHHHHHHHTCCTHHHHHHHHHHTCSSHHHHHHHHHHTHHHH
T ss_pred             ccHHHHHHhhhHHHHHHHHHHhcccCCCCCEEECHHHHHHHHHHHHhcCCCcHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Confidence            89999999999999999999932557889999999999999999999999999999999999997788899999988887


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      ..+..+..+..+.++|+||+++++++.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++++++++
T Consensus        83 ~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~~~T~gkI~~ll~~~~l~  162 (393)
T 3le2_A           83 LADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAEKETNGLITEVLPEGSAD  162 (393)
T ss_dssp             HSCCGGGTSCEEEEEEEEEEETTSCBCHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHHHHHHHTTTSCCCSSCTTCSC
T ss_pred             hccccCCCCcEEEeeeehhhcCCCCcChHHHHHHHHhhcceEEEecccccHHHHHHHHHHHHHHhhcCchhhhCCccCCC
Confidence            64332346778999999999999999999999999999999999999876788999999999999999999999988999


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccCCeEEEEeecCCCCCCceEEEEEEe
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFL  240 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~~~vveLp~~~~~~~~~~sm~iil  240 (391)
                      ++|+++|+||+||+|.|+.+|++..|..++|+..+|++++||||++++.++|...+++++|+|||++++++.++||+|||
T Consensus       163 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~~~~~~~~vleLPy~~~~~~~~~sm~iiL  242 (393)
T 3le2_A          163 SMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMTSKKKQYVSAYDGFKVLGLPYLQGQDKRQFSMYFYL  242 (393)
T ss_dssp             TTCCEEEEEEEEEECCBSSCCCGGGCEEEEEECTTSCEEEEEEEECCSCEEEEEETTEEEEEEEBCCTTCSCCEEEEEEE
T ss_pred             CCcEEEEEEeeeEecccccCCChhhccccccEeCCCcEEEEccccccCeeeeeeccCcEEEEeecCCCCCCCcEEEEEEe
Confidence            99999999999999999999999999999999999999999999998877777777999999999984222279999999


Q ss_pred             cCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCC---
Q 016311          241 PDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVG---  317 (391)
Q Consensus       241 P~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~---  317 (391)
                      |+++.+|.+++++|+....++.+++...++..++|.||||++++++||+++|++||++++|++ .||||+|++   .   
T Consensus       243 P~~~~~l~~l~~~L~~~~~~l~~~~~~~~v~~~~l~lPKF~i~~~~~L~~~L~~lGi~~~F~~-~Adfsgis~---~~~~  318 (393)
T 3le2_A          243 PDANNGLSDLLDKIVSTPGFLDNHIPRRQVKVREFKIPKFKFSFGFDASNVLKGLGLTSPFSG-EEGLTEMVE---SPEM  318 (393)
T ss_dssp             ESSTTCHHHHHHHHHHSTTTGGGCCCCSEEEEEEEEEECEEEEEEEETHHHHHHTTCCGGGST-TTCCTTTBS---CHHH
T ss_pred             CCCCCCHHHHHHHHhcCHHHHHHhhhhceeeecceECcEEeccCCcchHHHHHhCCchhhcCC-cCCcccccc---cccc
Confidence            999999999999997433456667766666666899999999999999999999999999998 899999997   4   


Q ss_pred             -CCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccC-CCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          318 -KNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVL-SDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       318 -~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~-~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                       .+++|++++|++.|+|||+|++|+|+|++.+..++.+. +++++|+|||||+|+|+|+.|+.|||+|||.+|..
T Consensus       319 ~~~l~vs~v~hka~ieV~E~GteAaAaT~~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~  393 (393)
T 3le2_A          319 GKNLCVSNIFHKACIEVNEEGTEAAAASAGVIKLRGLLMEEDEIDFVADHPFLLVVTENITGVVLFIGQVVDPLH  393 (393)
T ss_dssp             HTTCCCCEEEEEEEEEECSCBCSCCCCCCCHHHHHTTTSCCCEEEEECCSCEEEEEEETTTCCEEEEEEESCTTC
T ss_pred             CCCeeEeEEEEEEEEEEcCCCchhhcccceeeeeccCCCCCCCceEEecCCEEEEEEECCCCcEEEEEEecCCCC
Confidence             58999999999999999999999999987666666543 22368999999999999999999999999999974


No 2  
>4ga7_A Leukocyte elastase inhibitor; serpin, conformational change, serine protease inhibitor, Ca inhibitor, chymase inhibitor, chymotrypsin inhibitor; 2.90A {Homo sapiens}
Probab=100.00  E-value=1.7e-86  Score=641.01  Aligned_cols=371  Identities=29%  Similarity=0.462  Sum_probs=327.8

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHHhh
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVVFA   82 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l~~   82 (391)
                      |..+..++++||++||+++. ...+++|++|||+||+.+|+|+++||+|+|++||.++||++..++++..++.+...+.+
T Consensus        11 ~~~l~~~~~~Fa~~L~~~l~-~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~   89 (389)
T 4ga7_A           11 MEQLSSANTRFALDLFLALS-ENNPAGNIFISPFSISSAMAMVFLGTRGNTAAQLSKTFHFNTVEEVHSRFQSLNADINK   89 (389)
T ss_dssp             CCHHHHHHHHHHHHHHHHHH-HHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTGGGCTTHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhHHHHHHHHHHh-hcCCCCCEEEchHHHHHHHHHHHhhccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHhC
Confidence            55678899999999999998 45678999999999999999999999999999999999998667888899999888753


Q ss_pred             CCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCc
Q 016311           83 DGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNS  162 (391)
Q Consensus        83 ~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~  162 (391)
                         ...+..+.++|+||+++++++.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++++++++++
T Consensus        90 ---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~~~T~g~I~~ll~~~~l~~~  166 (389)
T 4ga7_A           90 ---RGASYILKLANRLYGEKTYNFLPEFLVSTQKTYGADLASVDFQHASEDARKTINQWVKGQTEGKIPELLASGMVDNM  166 (389)
T ss_dssp             ---TTCSSEEEEEEEEEEETTSCBCHHHHHHHHHHTSCCEEEECHHHHHHHHHHHHHHHHHHHTTTSSTTSSCTTSSCTT
T ss_pred             ---CCCCcEEEEeeeeeecCCCccCHHHHHHHHHHhCCeeEecccccCHHHHHHHHHHHHHHhhCCchhhccCCCCCCCC
Confidence               34567899999999999999999999999999999999999997678899999999999999999999998899999


Q ss_pred             CeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc--cCCeEEEEeecCCCCCCceEEEEEEe
Q 016311          163 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA--FDGFKVLGLPYKQGEDKRRFSMYFFL  240 (391)
Q Consensus       163 t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLp~~~~~~~~~~sm~iil  240 (391)
                      |+++|+||+||+|.|+.+|++..|.+++|+..+|++++||||++.+.++|..  ..++++|+|||+++    ++||+|||
T Consensus       167 t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vleLPy~~~----~~sm~iiL  242 (389)
T 4ga7_A          167 TKLVLVNAIYFKGNWKDKFMKEATTNAPFRLNKKDRKTVKMMYQKKKFAYGYIEDLKCRVLELPYQGE----ELSMVILL  242 (389)
T ss_dssp             CCEEEEEEEEEECCBSSCCCTTTCEEEEEEEETTEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBTTS----SEEEEEEE
T ss_pred             ceEEEEEEEEEEeeecCCCCccCccccceEeCCCcEEEEEEEEEeeeEEEEEECCCCEEEEEEECCCC----CEEEEEEe
Confidence            9999999999999999999999999999999999999999999998766544  55899999999987    79999999


Q ss_pred             cCCC----CChHHHHHHhcCchHHHhhcC--CCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCC
Q 016311          241 PDAK----DGLPTLLEKMGSESKFLDHHL--PSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDS  314 (391)
Q Consensus       241 P~~~----~~l~~l~~~L~~~~~~l~~~~--~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~  314 (391)
                      |++.    .+|.+++++|+  ...+..|.  ...+...++|.||||++++++||+++|++||++++|++..||||+|++ 
T Consensus       243 P~~~~~~~~~L~~le~~L~--~~~l~~~~~~~~~~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F~~~~Adfsgis~-  319 (389)
T 4ga7_A          243 PDDIEDESTGLKKIEEQLT--LEKLHEWTKPENLDFIEVNVSLPRFKLEESYTLNSDLARLGVQDLFNSSKADLSGMSG-  319 (389)
T ss_dssp             ESSCCSSSSSCHHHHHHCC--HHHHHHHHSGGGCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTBC-
T ss_pred             cCCCccccccHHHHHHHhC--HHHHHHHhhhhcCcceEEEEEeccEEEEEeechHHHHHHcCcHhhcCCCcCCcccccC-
Confidence            9998    88999999997  34555565  345566789999999999999999999999999999976899999998 


Q ss_pred             CCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          315 PVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       315 ~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                        ..+++|++++||+.|+|||+|++|+|+|++.+..++.  +.+..|+|||||+|+|+|+.||.|||+|+|.+|
T Consensus       320 --~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~s~--~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P  389 (389)
T 4ga7_A          320 --ARDIFISKIVHKSFVEVNEEGTEAAAATAGIATFCMD--DPEENFTADHPFLFFIRHNSSGSILFLGRFSSP  389 (389)
T ss_dssp             --CSSCCEEEEEEEEEEEECSCBC----------CCCSS--SCEEEEECCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred             --CCCcceeeEEEEEEEEecCCCcccccccccccccccC--CCCCcEEccCCEEEEEEECCCCcEEEEEEecCC
Confidence              4689999999999999999999999999866555544  235689999999999999999999999999999


No 3  
>2h4r_A MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 2.70A {Gallus gallus} PDB: 2dut_A
Probab=100.00  E-value=6.1e-85  Score=636.20  Aligned_cols=375  Identities=29%  Similarity=0.503  Sum_probs=328.7

Q ss_pred             chhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh---------------
Q 016311            2 DVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN---------------   66 (391)
Q Consensus         2 ~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~---------------   66 (391)
                      ++..+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..               
T Consensus         5 ~~~~l~~~~~~Fa~~l~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~   83 (415)
T 2h4r_A            5 SMEQVSASIGNFTVDLFNKLN-ETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESSSVARPSRGR   83 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TTCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTSCCC---------------
T ss_pred             hHHHHHHHHHHHHHHHHHHHh-ccCCCCCEEEchHHHHHHHHHHHhhccchHHHHHHHHhCCCccccccccccccccccc
Confidence            567788999999999999998 4567899999999999999999999999999999999999752               


Q ss_pred             -------------hHHHHHHHHHHHHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHH
Q 016311           67 -------------DQLNAFASELVAVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAE  133 (391)
Q Consensus        67 -------------~~~~~~~~~l~~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~  133 (391)
                                   ++++..++.+...+.+   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.++++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~  160 (415)
T 2h4r_A           84 PKRRRMDPEHEQAENIHSGFKELLTAFNK---PRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQ  160 (415)
T ss_dssp             ------------CHHHHHHHHHHHHHHTC---SSCSSEEEEEEEEEEETTSCBCHHHHHHHHHHHSCCCEEECTTTCHHH
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHhC---CCCCcEEEEEEeehhhCCCCcCHHHHHHHHHHhCCeEEEecCCCCHHH
Confidence                         5778888888887753   335678999999999999999999999999999999999999766889


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCCCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccc
Q 016311          134 VSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVS  213 (391)
Q Consensus       134 a~~~iN~wv~~~T~g~i~~~l~~~~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~  213 (391)
                      +++.||+||+++|+|+|++++++++++++|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.++|+
T Consensus       161 a~~~IN~WV~~~T~gkI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~  240 (415)
T 2h4r_A          161 SRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVL  240 (415)
T ss_dssp             HHHHHHHHHHHHTTTSCCCCSCGGGCCSSCCEEEEEEEEEECBBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHhcCchhhhcCccccCCcceEEEEEhheEeceecCCCCcccCeeeEEEecCCcEEEeeEEeecCcEeEE
Confidence            99999999999999999999998889999999999999999999999999999999999999999999999998866654


Q ss_pred             c--cCCeEEEEeecCCCCCCceEEEEEEecCCC----CChHHHHHHhcCchHHHhhcCC--CCceeeeeeeceeeeeecc
Q 016311          214 A--FDGFKVLGLPYKQGEDKRRFSMYFFLPDAK----DGLPTLLEKMGSESKFLDHHLP--SQRVEVGDFRIPRFKISFG  285 (391)
Q Consensus       214 ~--~~~~~vveLp~~~~~~~~~~sm~iilP~~~----~~l~~l~~~L~~~~~~l~~~~~--~~~~~~v~l~lPkf~i~~~  285 (391)
                      .  ..++++|+|||+++    ++||+||||++.    .+|.+++++|+  ...+..|..  ..+...++|.||||+++++
T Consensus       241 ~~~~l~~~vleLPY~~~----~~sm~iiLP~~~~~~~~~L~~le~~L~--~~~l~~~~~~~~~~~~~v~v~lPKF~i~~~  314 (415)
T 2h4r_A          241 IMEKMNFKMIELPYVKR----ELSMFILLPDDIKDGTTGLEQLERELT--YERLSEWADSKMMTETLVDLHLPKFSLEDR  314 (415)
T ss_dssp             EETTTTEEEEEEEBGGG----SEEEEEEEESSCCSSSSSCHHHHTTCC--HHHHHHHHTCTTCEEEEEEEEEECEEECCE
T ss_pred             EeCCCCEEEEEeeCCCC----cEEEEEEecCCCcccccCHHHHHHHhC--HhHHHHHhhhhcccceeEEEECCeEEEeee
Confidence            4  56899999999987    799999999998    89999999997  345666655  4555678999999999999


Q ss_pred             CCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeec
Q 016311          286 IEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADH  365 (391)
Q Consensus       286 ~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~dr  365 (391)
                      +||+++|++||++++|+. .||||+|++   ..+++|++++|++.|+|||+|++|+|+|++.+..++.+.+++.+|+|||
T Consensus       315 ~dL~~~L~~lGi~~~F~~-~Adfsgis~---~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~~~~~~~~~~f~~dr  390 (415)
T 2h4r_A          315 IDLRDTLRNMGMTTAFTT-NADFRGMTD---KKDLAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSVINHVLKFKVDH  390 (415)
T ss_dssp             EECHHHHHHTTCCGGGST-TCCCTTTBS---SSCCCCCEEEEEEEEEECSSBSSCCC---------------CEEEECCS
T ss_pred             ecHHHHHHHcChhhhhcC-ccccccccC---CCCeEEEEEEEEEEEEecCCCcccccccchhhccccCCCCCCcEEEecC
Confidence            999999999999999995 899999998   4689999999999999999999999999876655555333237899999


Q ss_pred             CeeEEEEECCCCcEEEEEEecCCCC
Q 016311          366 PFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       366 PF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ||+|+|+|+.||.|||+|||.+|..
T Consensus       391 PFlf~I~~~~t~~iLF~G~v~~P~~  415 (415)
T 2h4r_A          391 PFHFFIRHNKSKTILFFGRFCCPVE  415 (415)
T ss_dssp             CEEEEEEETTTTEEEEEEEECSCCC
T ss_pred             CEEEEEEECCCCcEEEEEEeCCCCC
Confidence            9999999999999999999999973


No 4  
>3f5n_A Neuroserpin; cleaved form, fenib, human, tissue PLAS activator, hydrolase inhibitor; 3.15A {Homo sapiens}
Probab=100.00  E-value=1.1e-85  Score=638.32  Aligned_cols=370  Identities=29%  Similarity=0.536  Sum_probs=326.9

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh--hHHHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN--DQLNAFASELVAVV   80 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~--~~~~~~~~~l~~~l   80 (391)
                      |..+.+++++||++||+++. ...+++|++|||+||+.+|+|+++||+|+|++||.++||++..  .+++..++.+...+
T Consensus        16 ~~~l~~~~~~Fa~~L~~~l~-~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~el~~~L~~~~~~~~~~~~~~~~l~~~l   94 (407)
T 3f5n_A           16 ATFPEEAIADLSVNMYNRLR-ATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLKNGEEFSFLKEFSNMV   94 (407)
T ss_dssp             ---CTHHHHHHHHHHHHHHH-HTTTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC----CCCHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHH-hhCCCCCEEEchHHHHHHHHHHHhhcCchHHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            45677899999999999998 4567899999999999999999999999999999999999854  36778888888776


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      .+   +..+..+.++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|++++++++++
T Consensus        95 ~~---~~~~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll~~~~l~  170 (407)
T 3f5n_A           95 TA---KESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQ-NVAVANYINKWVENNTNNLVKDLVSPRDFD  170 (407)
T ss_dssp             TC----CCSCEEEEEEEEEEETTCCBCTTHHHHHHHTSCCEEEEECTTS-HHHHHHHHHHHHHHTTTTCSCCCCCGGGCC
T ss_pred             hc---cCCCcEEEEEEEEEEeCCCccCHHHHHHHHHhhcCceEEcCCCC-hHHHHHHHHHHHHHhhCCchhhcCCcccCC
Confidence            42   34667899999999999999999999999999999999999994 789999999999999999999999988999


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--C------eEEEEeecCCCCCCc
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--G------FKVLGLPYKQGEDKR  232 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~------~~vveLp~~~~~~~~  232 (391)
                      ++|+++|+||+||+|.|+.+|++..|..++|+..+|++++||||++.+.++|++.+  +      +++|+|||+++    
T Consensus       171 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~f~y~~~~~l~~~~~~~~~vleLPY~~~----  246 (407)
T 3f5n_A          171 AATYLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGD----  246 (407)
T ss_dssp             TTCCEEEEEEEEEECCBSSCCCGGGCEEEEEECTTSCEEEEEEEEEEEEEEEEEEECC-----CEEEEEEEEBTTS----
T ss_pred             CCceEEEEEeeeeecccccCCCccCceeeeEEcCCCeEEEEeEEEEeeeeeeEEccccccccCcceEEEEEECCCC----
Confidence            99999999999999999999999999999999999999999999999888877644  4      99999999987    


Q ss_pred             eEEEEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCC
Q 016311          233 RFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMV  312 (391)
Q Consensus       233 ~~sm~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is  312 (391)
                      ++||+||||+++.+|.+++++|+  ...+.+|....+...++|.||||++++++||+++|++||++++|+. .||||+|+
T Consensus       247 ~~sm~iiLP~~~~~L~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfsgis  323 (407)
T 3f5n_A          247 EISMMLVLSRQEVPLATLEPLVK--AQLVEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIK-DANLTGLS  323 (407)
T ss_dssp             SEEEEEEECCTTCCGGGTGGGCC--HHHHHHHHHHCEEEEEEEEEECEEEEEEEEHHHHHHHTTCCGGGST-TCCCTTTB
T ss_pred             cEEEEEEECCCCCCHHHHHHHhC--HHHHHHHHHhCcceEEEEECCCEEEeeecChHHHHHhCCchhhcCC-CCCccccc
Confidence            79999999999999999999997  3345556555566778999999999999999999999999999996 89999998


Q ss_pred             CCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCC
Q 016311          313 DSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL  389 (391)
Q Consensus       313 ~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~  389 (391)
                      +   ..+++|++++||+.|+|||+|++|+|+|++.+..++.+.+  ..|+|||||+|+|+|+.||.|||+|+|.+|.
T Consensus       324 ~---~~~l~vs~v~hka~ieVnE~GteAAAaT~~~~~~~~~~~~--~~f~~drPFlF~I~~~~t~~iLF~G~v~~P~  395 (407)
T 3f5n_A          324 D---NKEIFLSKAIHKSFLEVNEEGSEAAAVSGMIAISRMAVLY--PQVIVDHPFFFLIRNRRTGTILFMGRVMHPE  395 (407)
T ss_dssp             S---CTTCCCCEEEEEEEEEECSCBCCCCC-----CCSSSEEEE--CEEECCSCEEEEEEETTTCCEEEEEEESCCC
T ss_pred             C---CCCceeeeEEEEEEEEecCCccccccccceeeccccCCCC--CcEEecCCEEEEEEECCCCcEEEEEEeCCcC
Confidence            7   4789999999999999999999999999865555554322  3899999999999999999999999999996


No 5  
>3kcg_I Antithrombin-III, ATIII; michaelis complex, blood coagulation, calcium, disulfide bond, EGF-like domain, glycoprotein, hemophilia, hydrolase; HET: NAG FUC MAN NTP; 1.70A {Homo sapiens} SCOP: e.1.1.1 PDB: 1e04_I* 1ath_A 1ant_L* 1br8_L 1azx_I* 1dzh_L* 1e03_L* 1dzg_L* 1e05_L* 1jvq_L* 1lk6_L* 1nq9_I* 1oyh_L* 1r1l_L* 1sr5_A* 2ant_L* 2beh_L* 2hij_L* 2znh_A* 3evj_I* ...
Probab=100.00  E-value=8.5e-86  Score=642.14  Aligned_cols=378  Identities=29%  Similarity=0.514  Sum_probs=336.6

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC-----hhHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS-----NDQLNAFASELV   77 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~-----~~~~~~~~~~l~   77 (391)
                      +.++..++++||++||++++....+++|++|||+||+.+|+|+++||+|+|++||.++||++.     .++++..++.+.
T Consensus        48 ~~~l~~~~~~Fa~~L~k~l~~~~~~~~Ni~~SP~SI~~aLaml~~GA~G~T~~ql~~~L~~~~~~~~~~~~i~~~f~~l~  127 (432)
T 3kcg_I           48 VWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLN  127 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCTTSCCCBCHHHHHHHHHHHHTTCCHHHHHHHHHHTTCTTSCHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHhHHHHHHHHHHhhccCCCCCEEEcHHHHHHHHHHHHhhcccHHHHHHHHHhCCCccccccHHHHHHHHHHHH
Confidence            456778999999999999984345689999999999999999999999999999999999973     156888888888


Q ss_pred             HHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCC
Q 016311           78 AVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPG  157 (391)
Q Consensus        78 ~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~  157 (391)
                      ..+.+..  ..+..+.++|+||+++++.+.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|+++++++
T Consensus       128 ~~l~~~~--~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~~~T~gkI~~ll~~~  205 (432)
T 3kcg_I          128 CRLYRKA--NKASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSE  205 (432)
T ss_dssp             HHHHHHH--TTTEEEEEEEEEEEETTSCCCHHHHHHHHHHHSSCCEEECHHHHHHHHHHHHHHHHHHHTTTSSCCSSCTT
T ss_pred             HHHhccc--CCCcEEEEEEEEEEcCCCccCHHHHHHHHHHhCCeEEeccCCCCHHHHHHHHHHHHHhhccCchhccCCcc
Confidence            7775311  14568999999999999999999999999999999999999976677778899999999999999999988


Q ss_pred             CCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC-CeEEEEeecCCCCCCceEEE
Q 016311          158 SVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD-GFKVLGLPYKQGEDKRRFSM  236 (391)
Q Consensus       158 ~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~-~~~vveLp~~~~~~~~~~sm  236 (391)
                      +++++|.++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.++|+..+ ++++++|||+++    ++||
T Consensus       206 ~l~~~T~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~f~y~~~~~~~~vleLPy~~~----~~sm  281 (432)
T 3kcg_I          206 AINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGD----DITM  281 (432)
T ss_dssp             SSCTTCCEEEEEEEEEEECBSSCCCGGGCEEEEEECTTSCEEEEEEEEEEEEEEEEECGGGCEEEEEEBTTS----SEEE
T ss_pred             cCCCCceEEEEeHHhhhhhhhcCCCcccceeeeEEECCCeEEEEEEEEecceeeEEEecCCcEEEEEEcCCC----ceEE
Confidence            89999999999999999999999999999999999999999999999999888777655 899999999988    7999


Q ss_pred             EEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC
Q 016311          237 YFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV  316 (391)
Q Consensus       237 ~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~  316 (391)
                      +||||+++.+|.+++++|+  ...+.+|+...+...++|.||||++++++||+++|++||++++|++..||||||++.. 
T Consensus       282 ~iiLP~~~~~L~~le~~L~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfsgis~~~-  358 (432)
T 3kcg_I          282 VLILPKPEKSLAKVEKELT--PEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEG-  358 (432)
T ss_dssp             EEEECCTTSCHHHHHHSCC--HHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTSCSS-
T ss_pred             EEEecCCCCCHHHHHHHcC--HHHHHHHHHhCceeeEEEEecCEEEecccchhhhHhhCCchhhccCccCCcccccccC-
Confidence            9999999999999999997  3456666665666778999999999999999999999999999996589999998731 


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ..+++|++++|++.|+|||+|++|+|+|++.+..++.+ +.++.|+|||||+|+|+|+.||.|||+|||.+|.+
T Consensus       359 ~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~s~~-~~~~~F~adrPFlf~I~d~~t~~iLF~G~V~~P~~  431 (432)
T 3kcg_I          359 RDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLN-PNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCV  431 (432)
T ss_dssp             SSCCCCCEEEEEEEEEECSCBCCCCCCCCCCCEESSCC-TTCEEEECCSCCEEEEEETTTTEEEEEC-CCCCCC
T ss_pred             CCCceeeeEEEEEEEEecCCCccccccchhhcccccCC-CCCcEEecCCCEEEEEEECCCCcEEEEEEeCCCCC
Confidence            25799999999999999999999999998665555542 33578999999999999999999999999999985


No 6  
>3ne4_A Alpha-1-antitrypsin; serpin, LUNG disease, liver disease, polymerisation, hydrolase inhibitor; 1.81A {Homo sapiens} PDB: 1qlp_A 2qug_A 3cwl_A 3cwm_A* 1psi_A 3drm_A 1kct_A 3dru_A 1hp7_A 1iz2_A* 1oph_A 1oo8_A 1atu_A 1d5s_B 1qmb_B
Probab=100.00  E-value=1.3e-84  Score=631.73  Aligned_cols=365  Identities=27%  Similarity=0.459  Sum_probs=329.5

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC----hhHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----NDQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~----~~~~~~~~~~l~~   78 (391)
                      +..+..++++||++||+++. ...+++|++|||+||+.+|+|+++||+|+|++||.++||++.    .++++..++.++.
T Consensus        53 ~~~l~~~~~~Fa~~L~~~l~-~~~~~~Ni~~SP~SI~~aLaml~~GA~g~T~~ql~~~L~~~~~~~~~~~i~~~f~~ll~  131 (424)
T 3ne4_A           53 FNKITPNLAEFAFSLYRQLA-HQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLR  131 (424)
T ss_dssp             -CTTHHHHHHHHHHHHHHHH-HHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hhCCCCCEEECHHHHHHHHHHHHhhcccHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence            45677899999999999998 457789999999999999999999999999999999999974    2578899999998


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+.+   +..+..++++|+||+++++.+.++|++.++++|++++..+||.+ ++.+++.||+||+++|+|+|+++++  +
T Consensus       132 ~l~~---~~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~wV~~~T~gkI~~ll~--~  205 (424)
T 3ne4_A          132 TLNQ---PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGD-TEEAKKQINDYVEKGTQGKIVDLVK--E  205 (424)
T ss_dssp             HHTC---SSCSSCCEEEEEEEEETTSCBCHHHHHHHHTTTCCEEEEECTTS-HHHHHHHHHHHHHHHTTTSSCSCCC--C
T ss_pred             HhcC---CCCCcEEEEEEEEEEcCCCCcCHHHHHHHHHhhcceEEEecCCC-hHHHHHHHHHHHHHhhCCCcccccc--C
Confidence            8753   34567899999999999999999999999999999999999995 7899999999999999999999997  7


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecCCCCCCceEEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYKQGEDKRRFSM  236 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~~~~~~~~~sm  236 (391)
                      ++++|.++|+||+||+|.|+.||++..|.+++|+..+|++++||||++.+.++|...  .++++|+|||+++     ++|
T Consensus       206 l~~~t~lvLvNaiyFKg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~f~y~~~~~l~~~vleLPY~~~-----~sm  280 (424)
T 3ne4_A          206 LDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGN-----ATA  280 (424)
T ss_dssp             CCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTT-----EEE
T ss_pred             CCCcchhhhhhHHhhehhhhcCCCcccceeEeeeccCCcEEEEEEEEeecceeEEEecCCCeEEEEEecCCC-----eEE
Confidence            999999999999999999999999999999999999999999999999987776654  4899999999975     899


Q ss_pred             EEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC
Q 016311          237 YFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV  316 (391)
Q Consensus       237 ~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~  316 (391)
                      +||||++ .+|.+++++|+  ...+.+|.+..+...++|.||||++++++||+++|++|||+++|++ .||||||++   
T Consensus       281 ~iiLP~~-~~l~~le~~L~--~~~l~~~~~~l~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~---  353 (424)
T 3ne4_A          281 IFFLPDE-GKLQHLENELT--HDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSN-GADLSGVTE---  353 (424)
T ss_dssp             EEEEECT-TCHHHHHHHCC--HHHHHHHHHCCCCEEEEEEEECEEEEEEEEHHHHHHHTTCCGGGST-TCCCTTTBS---
T ss_pred             EEEEcCc-CCHHHHHHHhC--HHHHHHHHHhCccceEEEEcCCEEEEeecchhhhhhhCChhhhcCC-CCCcccccC---
Confidence            9999998 57999999997  3456666555556678999999999999999999999999999998 899999998   


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ..+++|++++||+.|+|||+|++|+|+|++.+..++.    +..|++||||+|+|+|+.||.|||+|+|.||.+
T Consensus       354 ~~~l~Vs~v~hka~ieVnE~GteAAAaT~~~~~~~s~----~~~f~~drPFlf~I~d~~t~~iLF~G~v~~P~~  423 (424)
T 3ne4_A          354 EAPLKLSKAVHKAVLTIDEKGTEAAGAMFLEAIPMSI----PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ  423 (424)
T ss_dssp             SSCCCCCEEEEEEEEEECSSSSSSCCCCCCCCCCSSC----CCEEECCSCEEEEEEETTTCCEEEEEEESCTTC
T ss_pred             CCCcceeeEEEEEEEEEcCCCcccccccceeeeecCC----CCceeccCCEEEEEEECCCCeEEEEEEecCCCC
Confidence            4789999999999999999999999999865443332    347999999999999999999999999999986


No 7  
>1uhg_A Ovalbumin, S-ovalbumin; allergen, egg white protein, serpin; HET: SEP NAG; 1.90A {Gallus gallus} SCOP: e.1.1.1 PDB: 1ova_A* 1jti_A
Probab=100.00  E-value=9.5e-85  Score=629.78  Aligned_cols=365  Identities=25%  Similarity=0.444  Sum_probs=330.3

Q ss_pred             hhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh-----------h---HHHH
Q 016311            6 SISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN-----------D---QLNA   71 (391)
Q Consensus         6 ~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~-----------~---~~~~   71 (391)
                      +..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..           +   +++.
T Consensus         3 l~~~~~~Fa~~l~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~   81 (385)
T 1uhg_A            3 IGAASMEFCFDVFKELK-VHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDSIEAQCGTSVNVHS   81 (385)
T ss_dssp             HHHHHHHHHHHHHHHHH-HHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTCTTCTTCSHHHHTTTTSCTTTTH
T ss_pred             hhhHHHHHHHHHHHHHH-hcCCCCCEEECHHHHHHHHHHHHhhccCcHHHHHHHHhCCCcccccccccccccchHHHHHH
Confidence            45789999999999998 4567899999999999999999999999999999999999753           3   7888


Q ss_pred             HHHHHHHHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCccc
Q 016311           72 FASELVAVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVK  151 (391)
Q Consensus        72 ~~~~l~~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~  151 (391)
                      .++.+...+.+   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|+
T Consensus        82 ~~~~l~~~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~wV~~~T~gkI~  158 (385)
T 1uhg_A           82 SLRDILNQITK---PNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIR  158 (385)
T ss_dssp             HHHHHHHHHTS---CCSSEEEEEEEEEEEETTSCBCHHHHHHHHHHCSSCEEEECCTTTHHHHHHHHHHHHHHHTTTCSC
T ss_pred             HHHHHHHHHhC---CCCCcEEEEEEEeeccCCCCccHHHHHHHHHHhCCEEEEecCCCCHHHHHHHHHHHHHHHhcCchh
Confidence            89998888753   234678999999999999999999999999999999999999766889999999999999999999


Q ss_pred             ccCCCCCCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc--cCCeEEEEeecCCCC
Q 016311          152 EVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA--FDGFKVLGLPYKQGE  229 (391)
Q Consensus       152 ~~l~~~~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLp~~~~~  229 (391)
                      +++++++++++|+++|+||+||+|.|+.+|++..|..++|+..+|++++||||++.+.++|+.  ..++++|+|||+++ 
T Consensus       159 ~l~~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vleLPy~~~-  237 (385)
T 1uhg_A          159 NVLQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASG-  237 (385)
T ss_dssp             CCSCTTSSCTTCCEEEEEEEEEEECEEECCCGGGCEEEEECCCC--CEEEEEEEEEEEEEEEEEGGGTEEEEEEEBTTS-
T ss_pred             hhCCcccCCCccceEeeeeeEEeeeecCCCCcCCCcCcEEEECCCeEEEEEEEEeeceEEEEEeCCCCeEEEEeccCCC-
Confidence            999988999999999999999999999999999999999999999999999999988766654  55899999999987 


Q ss_pred             CCceEEEEEEecCCCCChHHHHHHhcCchHHHhhcCC--CCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCC
Q 016311          230 DKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLP--SQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGG  307 (391)
Q Consensus       230 ~~~~~sm~iilP~~~~~l~~l~~~L~~~~~~l~~~~~--~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~ad  307 (391)
                         ++||+||||++..+|.+++++|+  ...+.+|..  ..+...++|.||||++++++||+++|++||++++|+. .||
T Consensus       238 ---~~sm~iiLP~~~~~l~~l~~~L~--~~~l~~~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~-~Ad  311 (385)
T 1uhg_A          238 ---TMSMLVLLPDEVSGLEQLESIIN--FEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGITDVFSS-SAN  311 (385)
T ss_dssp             ---SEEEEEEEESSTTCHHHHHHHCC--HHHHHHHTSTTTCEEEEEEEEEECEEEEEEEEHHHHHHHHTCCGGGST-TCC
T ss_pred             ---cEEEEEEeCCCCCCHHHHHHHhC--hhHHHHHhhhhcccceEEEEEccceeecceecHHHHHHHcChhhhhcC-ccc
Confidence               79999999999999999999997  456777766  4566778999999999999999999999999999995 899


Q ss_pred             CcCCCCCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecC
Q 016311          308 LAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLN  387 (391)
Q Consensus       308 fs~is~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~  387 (391)
                      ||+|++   ..+++|++++|++.|+|||+|++|+|+|++.+..++.    +.+|+|||||+|+|+|+.||.|||+|||.+
T Consensus       312 fs~is~---~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~~~----~~~f~~drPFlf~I~~~~t~~iLF~G~v~~  384 (385)
T 1uhg_A          312 LSGISS---AESLKISQAVHAAHAEINEAGREVVGSAEAGVDAASV----SEEFRADHPFLFCIKHIATNAVLFFGRCVS  384 (385)
T ss_dssp             CTTTBC---STTCCEEEEEEEEEEEECSCEEECCCHHHHHHHHTTC----CCEEECCSCEEEEEEETTTCCEEEEEEESC
T ss_pred             cccccC---CCCeEEEEEEEEEEEEecCCCcccccccchheeccCC----CCEEEeeCCEEEEEEECCCCcEEEEEEcCC
Confidence            999998   4689999999999999999999999999866555543    358999999999999999999999999999


Q ss_pred             C
Q 016311          388 P  388 (391)
Q Consensus       388 P  388 (391)
                      |
T Consensus       385 P  385 (385)
T 1uhg_A          385 P  385 (385)
T ss_dssp             C
T ss_pred             C
Confidence            8


No 8  
>3sto_A Serine protease inhibitor; serpin fold, hydrolase inhibitor; 2.41A {Schistosoma haematobium}
Probab=100.00  E-value=5.8e-85  Score=633.70  Aligned_cols=374  Identities=22%  Similarity=0.437  Sum_probs=319.7

Q ss_pred             hhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHh--cCChhhHHHHHhhcCCCC----------hhHHHH
Q 016311            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISA--GSKGPTLDQLLSFLKSKS----------NDQLNA   71 (391)
Q Consensus         4 ~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~--ga~g~t~~el~~~L~~~~----------~~~~~~   71 (391)
                      .....++++||++||+++. ...+++|++|||+||+.+|+|+++  ||+|+|++||.++||++.          .++++.
T Consensus        13 ~~~~~~~~~Fa~~l~~~l~-~~~~~~Ni~~SP~Si~~aLaml~~~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~~~~~   91 (406)
T 3sto_A           13 YANISSHKAFTHAYLSTVT-ADFGGDNFLTCPLGILFTLGILLGSGGAQGRTGYQIGKTMRLKSTSSSWNSSEAQQEMKS   91 (406)
T ss_dssp             ---CCHHHHHHHHHHHHHT-GGGTTSCEEECHHHHHHHHHHHHHTSCSCHHHHHHHHHHTTCSTTSSSCCHHHHHHHHHH
T ss_pred             hhccchhhHHHHHHHHHHh-hcCCCCCEEEccHHHHHHHHHHHhccccCchHHHHHHHHhCCCcccccccccCCHHHHHH
Confidence            4456789999999999997 456789999999999999999999  999999999999999974          257888


Q ss_pred             HHHHHHHHHhhCCC---CCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCC
Q 016311           72 FASELVAVVFADGS---PSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNG  148 (391)
Q Consensus        72 ~~~~l~~~l~~~~~---~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g  148 (391)
                      .++.+...+.+...   ...+..+.++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|
T Consensus        92 ~~~~l~~~l~~~~~~~~~~~~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~g  170 (406)
T 3sto_A           92 LYQELNNSLTSEKTFLNEKEENVVRISTGIFVEKTYEVERRFNESIANDSEGELKQVDFSN-RTSATVDINDWVDQQSNG  170 (406)
T ss_dssp             HHHHHHHHHHTCEECC---CEESEEEEEEEEEETTSCCCHHHHHHHHTCSSEEEEEECTTS-HHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhccCcccccCCCcEEEEEeeeeecCCCccCHHHHHHHHHHhCCeEEEeCCCC-hHHHHHHHHHHHHHHhcC
Confidence            99998887763210   01146799999999999999999999999999999999999954 788999999999999999


Q ss_pred             cccccCCCCCCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecC
Q 016311          149 LVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYK  226 (391)
Q Consensus       149 ~i~~~l~~~~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~  226 (391)
                      +|+++++++ ++++|+++|+||+||+|.|+.+|++..|..++|+..+|++++||||++.+.++|+..  .++++|+|||+
T Consensus       171 kI~~ll~~~-l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~y~~~~~~~~~vleLPy~  249 (406)
T 3sto_A          171 LLEKFFTDD-IPDDTAMILVNVFYFRDFWQSPFEPHYTRKEDFYISPDRQITVDMMTQEGVMKYGKFEDEGFEIVSKPLN  249 (406)
T ss_dssp             CC---------CCSCCEEEEEEEEECEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBS
T ss_pred             cchhhccCC-CCCCceEEEEEeeEEEeecccCCCccCCcCceEECCCCeEEEEeEEEeeCceEEEEEcCCCeEEEEEecC
Confidence            999999876 999999999999999999999999999999999999999999999999987777654  68999999999


Q ss_pred             CCCCCceEEEEEEecCCCCChHHHHHHhc-CchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCC
Q 016311          227 QGEDKRRFSMYFFLPDAKDGLPTLLEKMG-SESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEG  305 (391)
Q Consensus       227 ~~~~~~~~sm~iilP~~~~~l~~l~~~L~-~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~  305 (391)
                      ++    ++||+||||++..+|.+++++|+ ..  .+.+|.+..+...++|.||||++++++||+++|++||++++|++..
T Consensus       250 ~~----~~sm~iiLP~~~~~l~~l~~~L~~~~--~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~  323 (406)
T 3sto_A          250 NT----RFTFVIVLPLEKWSLNGATELLNGNK--VLSEYVKNLKETTVSLRLPKFTLKNTLDLVPTLKSIGVVDLFDPVK  323 (406)
T ss_dssp             ST----TEEEEEEEESSSSCCTTHHHHHSSSS--CHHHHHTTCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTT
T ss_pred             CC----cEEEEEEecCCCCCHHHHHHHcCchH--HHHHHHHhCcEeEEEEEecCEEEeeecChhhhhhhCCchhhcCCCC
Confidence            97    79999999999889999999998 43  4555666666777899999999999999999999999999999767


Q ss_pred             CCCcCCCCCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEe
Q 016311          306 GGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHV  385 (391)
Q Consensus       306 adfs~is~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v  385 (391)
                      ||||+|++   ..+++|++++|++.|+|||+|++|+|+|++.+..++.. +.+..|++||||+|+|+|+.||.|||+|||
T Consensus       324 Adfsgis~---~~~l~vs~v~hka~ieV~E~GteAaAaT~~~~~~~s~~-~~~~~f~~drPFlf~I~~~~t~~iLF~G~v  399 (406)
T 3sto_A          324 SDLSGITP---NPNLYVNEFIQTNVLKLNESGIEATTVTSPIFVPFSAI-IPEVDFHVTHPFICFIYDQQLTMPIMAAKV  399 (406)
T ss_dssp             CCCTTTCS---STTCCCSEEEEEEEEEECSSEESCCC-------CCCSC-CCSEEEECCSCEEEEEEETTTTEEEEEEEE
T ss_pred             CCcccccC---CCCceEEEEEEEEEEEecCCcccccccceeeeecccCC-CCCceEEeeCCEEEEEEECCCCcEEEEEEe
Confidence            99999998   46899999999999999999999999998666555542 345789999999999999999999999999


Q ss_pred             cCCCC
Q 016311          386 LNPLA  390 (391)
Q Consensus       386 ~~P~~  390 (391)
                      .+|.+
T Consensus       400 ~~P~~  404 (406)
T 3sto_A          400 MNPVL  404 (406)
T ss_dssp             SSCC-
T ss_pred             CCccC
Confidence            99985


No 9  
>1wz9_A Maspin precursor; serpin, tumor suppressor, serpinb5, signaling protein; HET: CME; 2.10A {Homo sapiens} PDB: 1xu8_A 1xqg_A 1xqj_A
Probab=100.00  E-value=8.1e-85  Score=627.73  Aligned_cols=366  Identities=25%  Similarity=0.419  Sum_probs=322.4

Q ss_pred             hhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHHhhC
Q 016311            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVVFAD   83 (391)
Q Consensus         4 ~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l~~~   83 (391)
                      ..+..++++||++||+++. ...+++|++|||+||+.+|+|+++||+|+|++||.++||++..++++..++.+...+.+ 
T Consensus         2 ~~l~~~~~~Fa~~l~~~l~-~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~-   79 (375)
T 1wz9_A            2 DALQLANSAFAVDLFKQLC-EKEPLGNVLFSPICLSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDVNK-   79 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHCTTSCCEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCHHHHHHHHHHHHHH-
T ss_pred             hhHhHHHHHHHHHHHHHHh-ccCCCCCEEECHHHHHHHHHHHHhhccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHhhc-
Confidence            3677899999999999998 44678999999999999999999999999999999999998667788889988887754 


Q ss_pred             CCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCcC
Q 016311           84 GSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNST  163 (391)
Q Consensus        84 ~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~t  163 (391)
                        ...+..++++|+||+++++.+.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++++++++++|
T Consensus        80 --~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~wV~~~T~g~I~~l~~~~~l~~~t  157 (375)
T 1wz9_A           80 --LSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQINNSIKDLTDGHFENILADNSVNDQT  157 (375)
T ss_dssp             --HTTTSEEEEEEEEEEEGGGCCCHHHHHHHTTTTTTTEEEECTTTCHHHHHHHHHHHHHHHTTTSCSCTTTTSCCCTTC
T ss_pred             --CCCCcEEEEeeeeeeeCCcchhHHHHHHHHHHhCCEEEEecCCCCHHHHHHHHHHHHHHHhcCchhhccCcccCCccc
Confidence              234678999999999999999999999999999999999999766889999999999999999999999988999999


Q ss_pred             eEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc--cCCeEEEEeecCCCCCCceEEEEEEec
Q 016311          164 RLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA--FDGFKVLGLPYKQGEDKRRFSMYFFLP  241 (391)
Q Consensus       164 ~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLp~~~~~~~~~~sm~iilP  241 (391)
                      +++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.++|..  ..++++++|||+++    ++||+||||
T Consensus       158 ~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vleLPy~~~----~~sm~iiLP  233 (375)
T 1wz9_A          158 KILVVNAAYFVGKWMKKFPESETKECPFRLNKTDTKPVQMMNMEATFCMGNIDSINCKIIELPFQNK----HLSMFILLP  233 (375)
T ss_dssp             CEEEEEEEEEECCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBGGG----SEEEEEEEE
T ss_pred             hhhheeheeeecccCCCCCccCceeeeEEeCCCeEEEEEEEEeeeeEeeEEeCCcceEEEEeecCCC----eEEEEEEec
Confidence            999999999999999999999999999999999999999999998766554  55899999999987    799999999


Q ss_pred             ----CCCCChHHHHHHhcCchHHHhhcCC--CCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCC
Q 016311          242 ----DAKDGLPTLLEKMGSESKFLDHHLP--SQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSP  315 (391)
Q Consensus       242 ----~~~~~l~~l~~~L~~~~~~l~~~~~--~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~  315 (391)
                          ++..+|.+++++|+  ...+..|..  ..+...++|.||||++++++||+++|++||++++|++..|||++|++  
T Consensus       234 ~~~~~~~~~l~~l~~~L~--~~~l~~~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfsgis~--  309 (375)
T 1wz9_A          234 KDVEDESTGLEKIEKQLN--SESLSQWTNPSTMANAKVKLSIPKFKVEKMIDPKACLENLGLKHIFSEDTSDFSGMSE--  309 (375)
T ss_dssp             SSCCCHHHHHHHHHHHCC--HHHHHHHTCGGGCEEEEEEEEEECEEEEEEECHHHHHHHHTCCSTTCTTTCCCTTTCC--
T ss_pred             CcccccCccHHHHHHHhC--HHHHHHHhhhhcceeeeEEEEcceEEecceechHHHHhhCChhhhcCCCCCcccccCC--
Confidence                77678999999997  345677766  45667789999999999999999999999999999965799999997  


Q ss_pred             CCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          316 VGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       316 ~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                       +.+++|++++|++.|+|||+|++|+|+|++.+..++      .+|++||||+|+|+|+.||.|||+|||.+|
T Consensus       310 -~~~l~vs~v~hka~ieV~E~GteAaAaT~~~~~~~~------~~f~~drPFlf~I~~~~t~~iLF~G~v~~P  375 (375)
T 1wz9_A          310 -TKGVALSNVIHKVCLEITEDGGDSIEVPGARILQHK------DELNADHPFIYIIRHNKTRNIIFFGKFCSP  375 (375)
T ss_dssp             -CTTCCEEEEEEEEEEEECSCC------------CEE------EEEECCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred             -CCCeEEEEEEEeeeEEecCCCcccccccchhhcccC------CEEEecCCEEEEEEECCCCcEEEEEEeCCC
Confidence             468999999999999999999999999986444333      479999999999999999999999999998


No 10 
>3nda_A Serpin-2; vaccination target, TICK, hydrolase inhibitor; HET: 1PE; 1.80A {Ixodes ricinus}
Probab=100.00  E-value=1.5e-84  Score=625.50  Aligned_cols=367  Identities=26%  Similarity=0.412  Sum_probs=331.2

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC----hhHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----NDQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~----~~~~~~~~~~l~~   78 (391)
                      |..+..++++||++||+++.. .. ++|++|||+||+.+|+|+++||+|+|++||.++||++.    .++++..++.+..
T Consensus         4 ~~~l~~~~~~Fa~~l~~~l~~-~~-~~Ni~~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~i~~~~~~l~~   81 (377)
T 3nda_A            4 EAKLTKANNRFGLRLLRALPS-GP-EKNVFFSPYSVSTAMGMAFAGARGQTQQELSQGLGFSDVDLTDAGVLDAYTHHTE   81 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCC-BT-TBCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTTGGGTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-cC-CCCEEEecHHHHHHHHHHHhhccchhHHHHHHHhCCCCcCCCHHHHHHHHHHHHH
Confidence            567788999999999999973 34 89999999999999999999999999999999999974    2678889999888


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+.+   +..+..++++|+||+++++++.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++ +++
T Consensus        82 ~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~wV~~~T~g~I~~ll-~~~  157 (377)
T 3nda_A           82 RLKS---TPSNSTLDVANAAAIQRTLALLNSYESALQSSFGAELHKVDFAGEPQAAVDFVNNWVKRKTHDKIEKLF-NEP  157 (377)
T ss_dssp             HHHH---CCCSSEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTTCHHHHHHHHHHHHHHHTTTSCCCSC-SSC
T ss_pred             HhcC---CCCCcEEEEEeEEEEeCCCCchHHHHHHHHHhccCceEEecCCCCHHHHHHHHHHHHHHHhcCchhhhc-CCC
Confidence            8764   245678999999999999999999999999999999999999766889999999999999999999999 789


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecCCCCCCceEEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYKQGEDKRRFSM  236 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~~~~~~~~~sm  236 (391)
                      ++++|+++|+||+||+|.|+.||++..|..++|+..+|++++||||++.+.++|+..  .++++++|||+++    ++||
T Consensus       158 l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~~~~~vleLPy~~~----~~sm  233 (377)
T 3nda_A          158 LDPDTLLVLLNAIYFKGEWNTAFVKEHTEKRQFFNGGVTPVEVDTMRLEARIKYRFFDDLQVEVVELPYRGL----DYTM  233 (377)
T ss_dssp             CCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEEETTTEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBTTS----SEEE
T ss_pred             CCCCceEEEEehheeccccccCCCCccccccceecCCCeEEEEeeEeeECeEEEEEEcCCCeEEEEEecCCC----cEEE
Confidence            999999999999999999999999999999999999999999999999987777654  5899999999987    7999


Q ss_pred             EEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC
Q 016311          237 YFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV  316 (391)
Q Consensus       237 ~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~  316 (391)
                      +||||++..+|.+++++|+  ...+.+|++..+...++|.||||++++++||+++|++||++++|++ .||||+|++   
T Consensus       234 ~iiLP~~~~~l~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPkF~i~~~~~L~~~L~~lGi~~~F~~-~Adfsgis~---  307 (377)
T 3nda_A          234 AILLPKENTGVEGLKQNLT--IDRFQNYLSDLRERKITVLLPKFKLETKYSLKAPLQSLGIKQIFES-GADLSGIND---  307 (377)
T ss_dssp             EEEEESSTTCHHHHHHHCC--HHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCHHHHS---
T ss_pred             EEEEcCCCCCHHHHHHHhC--HHHHHHHHHhCCeEEEEEEecceEeEeecCHHHHHHhCCchhhcCC-CCCCcccCC---
Confidence            9999999889999999997  3456666555566778999999999999999999999999999998 899999987   


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecC
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLN  387 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~  387 (391)
                       .+++|++++|++.|+|||+|++|+|+|++.+..++.+ +++..|++||||+|+|+|+.||.|||+|||.+
T Consensus       308 -~~l~vs~v~hka~ieV~E~GteAaAaT~~~~~~~s~~-~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~  376 (377)
T 3nda_A          308 -GSLRVSAVEHKAVVEVNEEGTVAAATTGVVIVPYSLG-PEPVVFRVDHPFLFFIRNTRTDDIFFVGQVNK  376 (377)
T ss_dssp             -SCEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEC----CCCCEEECCSCEEEEEEETTTCCEEEEEEECC
T ss_pred             -CCceEeEEEEEEEEEECCCCccccccceeeeecccCC-CCCCeEEeeCCEEEEEEECCCCcEEEEEEEec
Confidence             5799999999999999999999999998665555543 23568999999999999999999999999986


No 11 
>2arr_A Plasminogen activator inhibitor-2; serpin, peptide binding, hydrolase inhibitor-PEPT complex; 1.55A {Homo sapiens} PDB: 2arq_A 1jrr_A 1by7_A
Probab=100.00  E-value=2e-84  Score=626.94  Aligned_cols=368  Identities=29%  Similarity=0.507  Sum_probs=317.9

Q ss_pred             hhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC----hhHHHHHHHHHHHHH
Q 016311            5 ESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----NDQLNAFASELVAVV   80 (391)
Q Consensus         5 ~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~----~~~~~~~~~~l~~~l   80 (391)
                      .+..++++||++||+++. ..++++|+||||+||+.+|+|+++||+|+|++||.++||++.    .++++..++.+...+
T Consensus         3 ~l~~~~~~Fa~~l~~~l~-~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l   81 (382)
T 2arr_A            3 DLCVANTLFALNLFKHLA-KASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMASVLQFNEVGAAADKIHSSFRSLSSAI   81 (382)
T ss_dssp             CTTHHHHHHHHHHHHHHH-HHCSSSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTTTTC-----CHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHh-hcCCCCCEEEchHHHHHHHHHHHhhccCcHHHHHHHHhCCCCccccHHHHHHHHHHHHHHH
Confidence            567899999999999998 456789999999999999999999999999999999999986    357888899998887


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      .+   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++++++++
T Consensus        82 ~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~wV~~~T~g~I~~l~~~~~l~  158 (382)
T 2arr_A           82 NA---STGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEARKKINSWVKTQTKGKIPNLLPEGSVD  158 (382)
T ss_dssp             HC---CCSSEEEEEEEEEEEETTCCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHTTTSSCCCSCTTSSC
T ss_pred             hC---CCCCcEEEeeeehHHhCCCCccHHHHHHHHHHhCCEEEEecCcCcHHHHHHHHHHHHHHHhcCchhhhCCCcCCC
Confidence            53   234678999999999999999999999999999999999999655789999999999999999999999988999


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc--cCCeEEEEeecCCCCCCceEEEEE
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA--FDGFKVLGLPYKQGEDKRRFSMYF  238 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLp~~~~~~~~~~sm~i  238 (391)
                      ++|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.++|+.  ..++++++|||++.     +||+|
T Consensus       159 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vleLPy~~~-----~sm~i  233 (382)
T 2arr_A          159 GDTRMVLVNAVYFKGKWKTPFEKKLNGLFPFRVNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGD-----VSMFL  233 (382)
T ss_dssp             TTEEEEEEEEEEEEECBSSCCEECC---EEEEEETTEEEEECEEEEEEEEEEEEEGGGTEEEEEEEBSSS-----EEEEE
T ss_pred             CcceEEEEEeeEecccccCCCChhhcccceEecCCCceeeeeEEeccCcEeEEEECCCCeEEEEecCCCc-----EEEEE
Confidence            999999999999999999999999999999999999999999999988766654  56999999999983     99999


Q ss_pred             EecCCC----CChHHHHHHhcCchHHHhhcCCC--CceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCC
Q 016311          239 FLPDAK----DGLPTLLEKMGSESKFLDHHLPS--QRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMV  312 (391)
Q Consensus       239 ilP~~~----~~l~~l~~~L~~~~~~l~~~~~~--~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is  312 (391)
                      |||++.    .+|.+++++|+  ...+..|...  .+...++|.||||++++++||+++|++||++++|++..||||+|+
T Consensus       234 iLP~~~~~~~~~l~~l~~~L~--~~~l~~~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfsgis  311 (382)
T 2arr_A          234 LLPDEIADVSTGLELLESEIT--YDKLNKWTSKDKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNKGRANFSGMS  311 (382)
T ss_dssp             EEEC--CCSSSSCHHHHHHCC--HHHHHHHHCC--CEEEEEEEEEECEEEEEEEECHHHHHHHTCCGGGCTTTCCCTTTC
T ss_pred             EecCCCccccccHHHHHHHhC--HHHHHHHhhhccccceEEEEECcCEEeeccccHHHHHHhcCccccCCCCCCChhhcC
Confidence            999988    89999999997  3456666542  455678999999999999999999999999999996579999999


Q ss_pred             CCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          313 DSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       313 ~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                      +   ..+++|++++|++.|+|||+|++|+|+|++.+..++.+  .+.+|+|||||+|+|+|+.||.|||+|||.+|
T Consensus       312 ~---~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~~~~--~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P  382 (382)
T 2arr_A          312 E---RNDLFLSEVFHQAMVDVNEEGTEAAAGTGGVMTGRTGH--GGPQFVADHPFLFLIMHKITNCILFFGRFSSP  382 (382)
T ss_dssp             T---TCCEEEEEEEEEEEEEECCCBC----------CCCCCC--CSCEEECCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred             C---CCCeEEEEEEEeeeeeecCCCcccccccchhhccccCC--CCCeEEecCCEEEEEEECCCCcEEEEEEeCCC
Confidence            8   46899999999999999999999999998655555542  24689999999999999999999999999998


No 12 
>2ceo_A Thyroxine-binding globulin; transport, serpin, hormone trans thyroxine, disease mutation, glycoprotein; HET: T44; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.5e-84  Score=622.28  Aligned_cols=369  Identities=24%  Similarity=0.354  Sum_probs=325.6

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----hHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----DQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----~~~~~~~~~l~~   78 (391)
                      ...+..++++||++||+++. ...+++|++|||+||+.+|+|+++||+|+|++||.++||++..    ++++..++.+..
T Consensus         3 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~   81 (379)
T 2ceo_A            3 LYKMSSINADFAFNLYRRFT-VETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTPMVEIQHGFQHLIC   81 (379)
T ss_dssp             -CHHHHHHHHHHHHHHHHHH-HHSTTSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHH-hcCCCCCEEEchHHHHHHHHHHHhhccchHHHHHHHHhCCCCcCCCHHHHHHHHHHHHH
Confidence            35677899999999999997 4567899999999999999999999999999999999999742    578889999988


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+..   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  +
T Consensus        82 ~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~l~~--~  155 (379)
T 2ceo_A           82 SLNF---PKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSN-ISAAKQEINSHVEMQTKGKVVGLIQ--D  155 (379)
T ss_dssp             HHSS---CCTTEEEEEEEEEEEETTSCBCHHHHHHHHHHHCEEEEEECTTC-HHHHHHHHHHHHHHHTTTSSCCCCC--C
T ss_pred             HhhC---CCCCcEEEEeEhhhhhCCCChhHHHHHHHHHHhCCeeeecCCCC-HHHHHHHHHHHHHHHhCCcchhhcc--C
Confidence            8753   23557899999999999999999999999999999999999985 7889999999999999999999996  4


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccC-eEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCCCceEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYD-FHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFS  235 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~-F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~~~~~s  235 (391)
                      ++++|+++|+||+||+|.|+.+|++..|.+++ |+..+|++++||||++.+.++|++.+  ++++|+|||+++     .+
T Consensus       156 l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~vleLPy~~~-----~s  230 (379)
T 2ceo_A          156 LKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMEQYYHLVDMELNCTVLQMDYSKN-----AL  230 (379)
T ss_dssp             CCSSCCEEEEEEEEEEEBBSSCCCGGGCEEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSSS-----EE
T ss_pred             CCCCCEEEEEEHhhhhchhcCCCChhhCccCCceEeCCCcEEEEEEEEeeeeEeEEEeCCCCeEEEEeecCCC-----ee
Confidence            99999999999999999999999999999999 99999999999999999877776644  799999999986     59


Q ss_pred             EEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCC
Q 016311          236 MYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSP  315 (391)
Q Consensus       236 m~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~  315 (391)
                      |+||||++ .+|.+++++|+  ...+..|.+..+...++|.||||++++++||+++|++||++++|+. .||||+|++  
T Consensus       231 m~iiLP~~-~~l~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~--  304 (379)
T 2ceo_A          231 ALFVLPKE-GQMESVEAAMS--SKTLKKWNRLLQKGWVDLFVPKFSISATYDLGATLLKMGIQHAYSE-NADFSGLTE--  304 (379)
T ss_dssp             EEEEEECT-TCHHHHHHHCS--HHHHHHHHHHCEEEEEEEEEECEEEEEEEETHHHHHHHTCCTTTST-TCCCTTTBS--
T ss_pred             EEEEeeCC-CcHHHHHHHhC--HHHHHHHHHhcccCcceEECCcEEEeeeecHHHHHHhcCccccccC-CCCcccCCC--
Confidence            99999998 68999999997  3445555555556678999999999999999999999999999985 899999998  


Q ss_pred             CCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          316 VGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       316 ~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                       ..+++|++++|++.|+|||+|++|+|+|++.+..++.+.+++.+|+|||||+|+|+|+.||.|||+|||.+|..
T Consensus       305 -~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~  378 (379)
T 2ceo_A          305 -DNGLKLSNAAHKAVLHIGEKGTEAAAVPEVELSDQPENTFLHPIIQIDRSFMLLILERSTRSILFLGKVVNPTE  378 (379)
T ss_dssp             -SSCCCCCEEEEEEEEEECSSBSSCCCCCC--------CCSCSCEEECCSCEEEEEEETTTTEEEEEEEESCSBC
T ss_pred             -CCCeEEeccceeEEEEecCCCcccccccchhhccccCCCCCCCeEEecCCEEEEEEECCCCcEEEEEecCCCCC
Confidence             46899999999999999999999999998666555544333478999999999999999999999999999975


No 13 
>2zv6_A Serpin B3; serine proteinase inhibitor, reactive site loop, acetylation, alternative splicing, cytoplasm, polymorphism, protease inhibitor; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.6e-84  Score=630.10  Aligned_cols=368  Identities=27%  Similarity=0.479  Sum_probs=316.8

Q ss_pred             hhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----------------hH
Q 016311            5 ESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----------------DQ   68 (391)
Q Consensus         5 ~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----------------~~   68 (391)
                      .+..++++||++||+++. ...+ +|+||||+||+.+|+|+++||+|+|++||.++||++..                ++
T Consensus        14 ~~~~~~~~Fa~~l~~~l~-~~~~-~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~   91 (401)
T 2zv6_A           14 SLSEANTKFMFDLFQQFR-KSKE-NNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENTTGKAATYHVDRSGN   91 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHCC-SCEEECHHHHHHHHHHHHHTCCTHHHHHHHHHTTC--------------------C
T ss_pred             HHHHHHHHHHHHHHHHHh-hCCC-CCEEEchHHHHHHHHHHHHhccChHHHHHHHHhCCCcccccccccccccccccHHH
Confidence            356789999999999998 3456 99999999999999999999999999999999999752                46


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCC
Q 016311           69 LNAFASELVAVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNG  148 (391)
Q Consensus        69 ~~~~~~~l~~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g  148 (391)
                      ++..++.+...+.+   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.++++.+++.||+||+++|+|
T Consensus        92 ~~~~~~~l~~~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~~~T~g  168 (401)
T 2zv6_A           92 VHHQFQKLLTEFNK---STDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNE  168 (401)
T ss_dssp             THHHHHHHHHHHHS---CCSSCCEEEECCEEEETTSCCCHHHHHHHHHHHSCCEEEECTTTCHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHhhC---CCCCcEEEEEEEEEecCCCChhHHHHHHHHHHhCCEEEEccCCCCHHHHHHHHHHHHHHhhCC
Confidence            78888888888753   235678999999999999999999999999999999999999766889999999999999999


Q ss_pred             cccccCCCCCCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc--cCCeEEEEeecC
Q 016311          149 LVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA--FDGFKVLGLPYK  226 (391)
Q Consensus       149 ~i~~~l~~~~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLp~~  226 (391)
                      +|++++++++++++|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.++|..  ..++++|+|||+
T Consensus       169 kI~~ll~~~~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~f~~~~~~~l~~~vleLPY~  248 (401)
T 2zv6_A          169 KIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYK  248 (401)
T ss_dssp             CSCCSSCTTTSCTTCCEEEEEEEEECCCBSSCCCTTSEEEEEECSSSSCCEEEEEEEEEEEEEECEETTTTEEEEEEEBT
T ss_pred             ccccccCcccCCCcceEEEEEhheeccccCCCCCCCCceeeEEEecCCceEEeEEEeccCceeEEEeCCCCEEEEEeecC
Confidence            999999988999999999999999999999999999999999999999999999999988666544  568999999999


Q ss_pred             CCCCCceEEEEEEecCCCCChHHHHHHhcCchHHHhhcCC--CCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCC
Q 016311          227 QGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLP--SQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGE  304 (391)
Q Consensus       227 ~~~~~~~~sm~iilP~~~~~l~~l~~~L~~~~~~l~~~~~--~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~  304 (391)
                      ++    ++||+||||++..+|.+++++|+  ...+.+|..  ..+...++|.||||++++++||+++|++||++++|+. 
T Consensus       249 ~~----~~sm~iiLP~~~~~L~~le~~L~--~~~l~~~~~~~~~~~~~v~v~lPKFkie~~~dL~~~L~~lGi~~~F~~-  321 (401)
T 2zv6_A          249 GK----DLSMIVLLPNEIDGLQKLEEKLT--AEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNG-  321 (401)
T ss_dssp             TS----SSEEEEEEESSTTCHHHHHHHCC--HHHHHHHTCGGGCEEEEEEEEEECCEEEEEEECHHHHHHTTCCGGGST-
T ss_pred             CC----cEEEEEEecCCCCCHHHHHHHhC--HhHHHHHhhhcccceeEEEEEeeeEEEEEEecHHHHHHhcCccccCCC-
Confidence            87    79999999999889999999997  345677765  4556678999999999999999999999999999995 


Q ss_pred             CCCCcCCCCCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEE
Q 016311          305 GGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGH  384 (391)
Q Consensus       305 ~adfs~is~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~  384 (391)
                      .||||+|++   ..+++|++++|++.|+|||+|++|+|+|++.+..++.+. ++.+|+|||||+|+|+|+.||.|||+|+
T Consensus       322 ~Adfsgis~---~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~~~~~-~~~~f~~drPFlF~I~~~~t~~iLF~G~  397 (401)
T 2zv6_A          322 DADLSGMTG---SRGLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSPTS-TNEEFHCNHPFLFFIRQNKTNSILFYGR  397 (401)
T ss_dssp             TCCCHHHHS---SSCCCEEEEEEEEEEECCSCC--------------------CEEEECSSCEEEEECCTTTTCCCCEEE
T ss_pred             cccccccCC---CCCeEEEEEEEEEEEEecCCCcccccccchhhccccCCC-CCCEEEecCCEEEEEEECCCCeEEEEEE
Confidence            899999998   468999999999999999999999999987665555432 2378999999999999999999999999


Q ss_pred             ecCC
Q 016311          385 VLNP  388 (391)
Q Consensus       385 v~~P  388 (391)
                      |.+|
T Consensus       398 v~~P  401 (401)
T 2zv6_A          398 FSSP  401 (401)
T ss_dssp             ECCC
T ss_pred             eCCC
Confidence            9998


No 14 
>1lj5_A Plasminogen activator inhibitor-1; beta-barrell, blood clotting; 1.80A {Homo sapiens} SCOP: e.1.1.1 PDB: 1dvn_A 1c5g_A 1a7c_A* 3q02_A 3q03_A 3r4l_A* 1oc0_A 1b3k_A 3pb1_I 1dvm_A 3eox_A 3cvm_A 1db2_A 9pai_A 3lw2_A 9pai_B
Probab=100.00  E-value=1.7e-84  Score=626.35  Aligned_cols=370  Identities=26%  Similarity=0.461  Sum_probs=332.1

Q ss_pred             CchhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh-hHHHHHHHHHHHH
Q 016311            1 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN-DQLNAFASELVAV   79 (391)
Q Consensus         1 ~~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~-~~~~~~~~~l~~~   79 (391)
                      +++..+..++++||++||+++.. ..+++|+||||+||+.+|+|+++||+|+|++||.++||++.. .+++..++.+...
T Consensus         3 ~~~~~l~~~~~~Fa~~l~~~l~~-~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~l~~~   81 (379)
T 1lj5_A            3 HPPSYVAHLASDFGVRVFQQVAQ-ASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKE   81 (379)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH-HSTTBCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhh-cCCCCCEEEchHHHHHHHHHHHhhccChHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence            45778889999999999999972 357899999999999999999999999999999999999865 5788888888887


Q ss_pred             HhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCC
Q 016311           80 VFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSV  159 (391)
Q Consensus        80 l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~  159 (391)
                      +..   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++++++
T Consensus        82 l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~Wv~~~T~g~I~~l~~~~~l  157 (379)
T 1lj5_A           82 LMG---PWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSE-VERARFIINDWVKTHTKGMISNLLGKGAV  157 (379)
T ss_dssp             HHC---GGGSSEEEEEEEEEEETTSCCCTTHHHHHHHHHSCCCEEECTTS-HHHHHHHHHHHHHHTTTTSCCCSSCTTSS
T ss_pred             HhC---CCCCcEEEEEEeeeeeCCcchhHHHHHHHHHHhCCEEEEECCCC-hHHHHHHHHHHHHhhcCCccccccCcccC
Confidence            753   23457899999999999999999999999999999999999986 57889999999999999999999998889


Q ss_pred             CCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccc--c--c-CCeEEEEeecCCCCCCceE
Q 016311          160 DNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVS--A--F-DGFKVLGLPYKQGEDKRRF  234 (391)
Q Consensus       160 ~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~--~--~-~~~~vveLp~~~~~~~~~~  234 (391)
                      +++|+++|+||+||+|.|+.+|++..|.+++|+..+|++++||||++.+.++|+  .  + .++++++|||+++    ++
T Consensus       158 ~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~gl~~~vleLPy~~~----~~  233 (379)
T 1lj5_A          158 DQLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGD----TL  233 (379)
T ss_dssp             CTTCCEEEEEEEEEEEEBSSCCCCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEBTTS----SE
T ss_pred             CCccceeeeeeeeecccccCCCCcccccceeEEeCCCeEEEEeEEeeEeeeceeeeEcCCCCceEEEEEecCCC----cE
Confidence            999999999999999999999999999999999999999999999999877763  3  3 4799999999987    79


Q ss_pred             EEEEEec-CCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCC
Q 016311          235 SMYFFLP-DAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVD  313 (391)
Q Consensus       235 sm~iilP-~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~  313 (391)
                      ||+|||| ++..+|.+++++|+  ...+..|....+...++|.||||++++++||+++|++||++++|++..|||++|++
T Consensus       234 sm~iiLP~~~~~~l~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfs~is~  311 (379)
T 1lj5_A          234 SMFIAAPYEKEVPLSALTNILS--AQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSD  311 (379)
T ss_dssp             EEEEEEESSTTSCTHHHHTTCC--HHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTCS
T ss_pred             EEEEEEecCCCCCHHHHHHHhC--HHHHHHHHHhCcceEEEEEeeEEEEeeeechHHHHHhcCCccCCCCCCCCccccCC
Confidence            9999999 88889999999997  34455555555566789999999999999999999999999999985699999998


Q ss_pred             CCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          314 SPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       314 ~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                         ..+++|++++|++.|+|||+|++|+|+|++.+..++    .+.+|+|||||+|+|+|+.||.|||+|+|.+|
T Consensus       312 ---~~~l~vs~v~hka~ieV~E~GteAaAaT~~~~~~~~----~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P  379 (379)
T 1lj5_A          312 ---QEPLHVAQALQKVKIEVNESGTVASSSTAVIVSARM----APEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP  379 (379)
T ss_dssp             ---SSCCCEEEEEEEEEEEECSSEEEEEEEEEEEESSCC----CCCCCCBCCEEEEEEEETTTTEEEEEEEEECC
T ss_pred             ---CCCeEEeeeeEEeEEEecCCCcCcccccceeecccC----CCCEEEecCCEEEEEEECCCCeEEEEEEecCC
Confidence               468999999999999999999999999985443332    24579999999999999999999999999998


No 15 
>4au2_A HSP47, serpin peptidase inhibitor, clade H (heat shock P 47), member 1, (collagen binding...; chaperone-peptide complex; 2.30A {Canis lupus familiaris} PDB: 4au3_A 4au4_A 4awr_A 4au3_B
Probab=100.00  E-value=5.8e-84  Score=624.84  Aligned_cols=366  Identities=21%  Similarity=0.374  Sum_probs=324.0

Q ss_pred             hhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh--hHHHHHHHHHHHHHh
Q 016311            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN--DQLNAFASELVAVVF   81 (391)
Q Consensus         4 ~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~--~~~~~~~~~l~~~l~   81 (391)
                      .++++++++||++||++++ ..++++|+||||+||+.+|+|+++||+|+|++||.++||++..  .+++..++.+...+.
T Consensus         7 ~~l~~~~~~Fa~~L~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~l~~~l~   85 (392)
T 4au2_A            7 ATLAERSAGLAFSLYQAMA-KDQAVENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLRDEEVHAGLGELLRSLS   85 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HCTTCCSEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCCCCeEEECHHHHHHHHHHHHhhcCcHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHh
Confidence            4677899999999999998 5678899999999999999999999999999999999999853  678888888887764


Q ss_pred             hCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCC
Q 016311           82 ADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDN  161 (391)
Q Consensus        82 ~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~  161 (391)
                      .  ....+..+.++|++|+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  ++++
T Consensus        86 ~--~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~l~~--~~~~  160 (392)
T 4au2_A           86 N--STARNVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRD-KRSALQSINEWAAQTTDGKLPEVTK--DVER  160 (392)
T ss_dssp             C-------CCCEEEEEEEEETTCCCCHHHHHHHHHHHCEEEEEECTTS-HHHHHHHHHHHHHHHTTTSSCCSCS--CCCC
T ss_pred             c--CCCCCceEEEEEEEEeecCCchhHHHHHHHHHhhCCeeEEecCCC-hHHHHHHHHHHHHHhcCCCccchhc--ccCC
Confidence            2  123456899999999999999999999999999999999999986 7889999999999999999999996  6999


Q ss_pred             cCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc--cCCeEEEEeecCCCCCCceEEEEEE
Q 016311          162 STRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA--FDGFKVLGLPYKQGEDKRRFSMYFF  239 (391)
Q Consensus       162 ~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLp~~~~~~~~~~sm~ii  239 (391)
                      +|.++|+||+||+|.|+.+|++..|..++|+..+|+++.||||++.+.++|..  ..++++|+|||+++    .++|+|+
T Consensus       161 ~t~lvLvNAiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~~~~~~~~~~~~vleLPy~~~----~~sm~il  236 (392)
T 4au2_A          161 TDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMMHRTGLYNYYDDEKEKLQIVEMPLAHK----LSSLIIL  236 (392)
T ss_dssp             SSSEEEEEEEEECCCBSSCCCTTSEEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBGGG----SEEEEEE
T ss_pred             cchhhheehhheeccccCCCCccccccCceecCCCceeEEeeeeecceeeEEeeccCceeEEEeecCCC----cEEEEEE
Confidence            99999999999999999999999999999999999999999999998766554  56899999999998    8999999


Q ss_pred             ecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCCC
Q 016311          240 LPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGKN  319 (391)
Q Consensus       240 lP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~~  319 (391)
                      +|++..++.++++.|+  ...+..+....+...++|.||||++++++||+++|++||++++|++..||||+|++   ..+
T Consensus       237 lP~~~~~l~~le~~l~--~~~l~~~~~~~~~~~v~v~lPKFkie~~~dL~~~L~~lGi~~~F~~~~Adfs~is~---~~~  311 (392)
T 4au2_A          237 MPHHVEPLERLEKLLT--KEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMSG---KKD  311 (392)
T ss_dssp             EESSSCCTHHHHHHCC--HHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHHTCCTTTCTTTCCCHHHHS---SSC
T ss_pred             eCCCCCcHHHHHHHhh--HHHHHHHHhcccceEEEEEecceEEEEEechHHHHHhcCCcccCCCCCCccccCCC---CCC
Confidence            9999999999999997  44566666666677789999999999999999999999999999986899999998   478


Q ss_pred             eeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCC
Q 016311          320 LYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL  389 (391)
Q Consensus       320 l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~  389 (391)
                      ++|++++|++.|+|||+|++|+|+|.+...     ...+..|+|||||+|+|+|+.||.|||+|+|.||.
T Consensus       312 l~vs~v~hka~ieVnE~GteAaaat~~~~~-----~~~~~~f~~drPFlf~I~d~~t~~iLF~G~v~~P~  376 (392)
T 4au2_A          312 LYLASVFHATAFEWDTEGNPFDQDIYGREE-----LRSPKLFYADHPFIFLVRDTQSGSLLFIGRLVRPK  376 (392)
T ss_dssp             CCEEEEEEEEEEEECSCBCSCC-------------CCSCEEEECCSCEEEEEEETTTCCEEEEEEESCCS
T ss_pred             eEEEeeEEEEEEEECCCcccchhhheeccc-----CCCCCEEEeeCCEEEEEEECCCCcEEEEEEEeCCC
Confidence            999999999999999999999998874322     12256899999999999999999999999999996


No 16 
>4dy0_A GLIA-derived nexin; serpin, protease inhibitor, thrombin, cell surface, hydrolas inhibitor; HET: IDS SGN; 2.35A {Homo sapiens} PDB: 4dy7_C
Probab=100.00  E-value=7.3e-84  Score=621.91  Aligned_cols=369  Identities=26%  Similarity=0.463  Sum_probs=319.0

Q ss_pred             chhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHHh
Q 016311            2 DVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVVF   81 (391)
Q Consensus         2 ~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l~   81 (391)
                      |..++.+++++||++||++++ +.++++|+||||+||+.+|+|+++||+|+|++||.++||++.. +++..++.+...+.
T Consensus         4 ~~~~l~~~~~~f~~~L~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~-~~~~~~~~l~~~l~   81 (379)
T 4dy0_A            4 NPLSLEELGSNTGIQVFNQIV-KSRPHDNIVISPHGIASVLGMLQLGADGRTKKQLAMVMRYGVN-GVGKILKKINKAIV   81 (379)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHH-HHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTSCST-TTHHHHHHHHHHHH
T ss_pred             CccCHHHHhhHHHHHHHHHHH-hhCcCCcEEECHHHHHHHHHHHHHHcChHHHHHHHHHhCCChh-HHHHHHHHHHHHHh
Confidence            456777899999999999998 5678999999999999999999999999999999999999753 45666777776665


Q ss_pred             hCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCC
Q 016311           82 ADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDN  161 (391)
Q Consensus        82 ~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~  161 (391)
                      .   ..++..+.++|+||+++++.+.+.|++.++++|+++++.+||.+ +..+++.||+||+++|+|+|+++++++.+++
T Consensus        82 ~---~~~~~~l~~an~l~~~~~~~~~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~wV~~~T~g~I~~ll~~~~~~~  157 (379)
T 4dy0_A           82 S---KKNKDIVTVANAVFVKNASEIEVPFVTRNKDVFQCEVRNVNFED-PASACDSINAWVKNETRDMIDNLLSPDLIDG  157 (379)
T ss_dssp             C---GGGSSCCEEEEEEEESCTTSSCHHHHHHHHHHHCEEEEECCTTS-HHHHHHHHHHHHHHHTTTCCCCCCCGGGCCT
T ss_pred             c---cCCCceeeeeeeeeeEccccccchhhhhhhhcCCcEEEEeccCC-hHHHHHHHHHHHHHhcCCcccccCCcccCCc
Confidence            3   23556799999999999999999999999999999999999986 7899999999999999999999999888876


Q ss_pred             -cCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc-----cCCeEEEEeecCCCCCCceEE
Q 016311          162 -STRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA-----FDGFKVLGLPYKQGEDKRRFS  235 (391)
Q Consensus       162 -~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~-----~~~~~vveLp~~~~~~~~~~s  235 (391)
                       .|+++|+||+||+|.|+.+|++..|..++|+..+|+++.||||++.+.++|..     +.++++|+|||+++    ++|
T Consensus       158 ~~T~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~v~mM~~~~~~~~~~~~~~~~l~~~vl~LPy~~~----~~s  233 (379)
T 4dy0_A          158 VLTRLVLVNAVYFKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSAPNDLWYNFIELPYHGE----SIS  233 (379)
T ss_dssp             TTCCEEEEEEEEECCCBSSCCCGGGCEEEEEECTTSCEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEBTTS----SEE
T ss_pred             ccceEEEEEEEEEEeeecCCCchhhCeeeeEEeCCCceEEeeeeEeeeeecccccccccccceEEEEeccCCC----ceE
Confidence             49999999999999999999999999999999999999999999988665543     34799999999998    899


Q ss_pred             EEEEecCCCC-ChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCC
Q 016311          236 MYFFLPDAKD-GLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDS  314 (391)
Q Consensus       236 m~iilP~~~~-~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~  314 (391)
                      |+||||++.. +|.++++.|+  ...+.+++...+...++|.||||++++++||+++|++||++++|++..||||+|++.
T Consensus       234 m~iiLP~~~~~~l~~~~~~l~--~~~l~~~~~~~~~~~v~v~lPKFki~~~~~L~~~L~~lGi~~~F~~~~Adfs~is~~  311 (379)
T 4dy0_A          234 MLIALPTESSTPLSAIIPHIS--TKTIDSWMSIMVPKRVQVILPKFTAVAQTDLKEPLKVLGITDMFDSSKANFAKITTG  311 (379)
T ss_dssp             EEEEEESSTTSCGGGTSTTCC--HHHHHHHHTTCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGSTTTCCCTTTCC-
T ss_pred             EEEEecCccccchhHhhhhcC--HHHHHHHHHhccceEEEEeccceEEEEEeechHhHHhCCchhhcCCCCCCcccccCC
Confidence            9999997654 6899888886  456777777777788999999999999999999999999999998768999999873


Q ss_pred             CCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          315 PVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       315 ~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                        .++++|++++||+.|+|||+|++|+|+|++.+..++.    +.+|+|||||+|+|+|+.||.|||+|||.||
T Consensus       312 --~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~s~----~~~f~~drPFlf~I~d~~t~~iLF~G~v~~P  379 (379)
T 4dy0_A          312 --SENLHVSHILQKAKIEVSEDGTKASAATTAILIARSS----PPWFIVDRPFLFFIRHNPTGAVLFMGQINKP  379 (379)
T ss_dssp             ----CCCCCEEEEEEEEEECSCBC------------CCC----CCEEECCSCEEEEEEETTTTEEEEEEEESCC
T ss_pred             --CCCeEeeeeEEEEEEEECCCceeecccceeeeccCCC----CCEEEecCCEEEEEEECCCCCEEEEEEecCC
Confidence              3689999999999999999999999999866554443    4589999999999999999999999999999


No 17 
>2vdx_A Corticosteroid-binding globulin; transport protein, cortisol binding globulin, glycoprotein, lipid-binding, disease mutation, CBG, SERP cleaved; 1.84A {Homo sapiens} PDB: 2vdy_A*
Probab=100.00  E-value=2e-83  Score=617.59  Aligned_cols=364  Identities=25%  Similarity=0.415  Sum_probs=325.4

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC----hhHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----NDQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~----~~~~~~~~~~l~~   78 (391)
                      .+.+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++.    .++++..++.+..
T Consensus         4 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~   82 (373)
T 2vdx_A            4 HRGLASANVDFAFSLYKHLV-ALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGFNLTERSETEIHQGFQHLHQ   82 (373)
T ss_dssp             --CHHHHHHHHHHHHHHHHH-HHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hcCCCCCEEEccHHHHHHHHHHHhhccchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence            45677899999999999997 456789999999999999999999999999999999999974    2678889999988


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+.+   +..+..++++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  +
T Consensus        83 ~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~l~~--~  156 (373)
T 2vdx_A           83 LFAK---SDTSLEMTMGNALFLDGSLELLESFSADIKHYYESEVLAMNFQD-WATASRQINSYVKNKTQGKIVDLFS--G  156 (373)
T ss_dssp             HHHS---CCSSCEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTS-HHHHHHHHHHHHHHHTTTCSCCSSC--C
T ss_pred             Hhhc---cCCcccceeEEEEEEECCCChHHHHHHHHHHHhCCeeEeecCcc-hHHHHHHHHHHHHHHhcCchhhhcc--C
Confidence            8763   23567899999999999999999999999999999999999985 7889999999999999999999995  5


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCCCceEEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFSM  236 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~~~~~sm  236 (391)
                      ++++|+++|+||+||+|.|+.+|++..|.+++|+..+|++++||||++.+.++|++.+  ++++++|||+++     .+|
T Consensus       157 l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~vleLPy~~~-----~sm  231 (373)
T 2vdx_A          157 LDSPAILVLVNYIFFKGTWTQPFDLASTREENFYVDETTVVKVPMMLQSSTISYLHDSELPCQLVQMNYVGN-----GTV  231 (373)
T ss_dssp             -CCCCSEEEEEEEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEECSSSSEEEEEEEBSSS-----EEE
T ss_pred             CCCCCeEEEEEHHhhhhhhhCcCCccccccceEEeCCCcEEEEEEEEeeeeEeeEEeCCCCeEEEEEecCCC-----eEE
Confidence            9999999999999999999999999999999999999999999999999877776644  799999999985     799


Q ss_pred             EEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC
Q 016311          237 YFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV  316 (391)
Q Consensus       237 ~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~  316 (391)
                      +||||+++ +|.+++++|+  ...+..|.+..+...++|.||||++++++||+++|++||++++|+. .||||+|++   
T Consensus       232 ~iiLP~~~-~l~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfs~is~---  304 (373)
T 2vdx_A          232 FFILPDKG-KMNTVIAALS--RDTINRWSAGLTSSQVDLYIPKVTISGVYDLGDVLEEMGIADLFTT-QANFSRITQ---  304 (373)
T ss_dssp             EEEEECTT-CHHHHHHTCS--HHHHHHHHHHCEEEEEEEEEECCEEEEEEECHHHHHHTTCCGGGST-TCCCTTTCS---
T ss_pred             EEEecCCC-CHHHHHHHhC--HHHHHHHHHhhhceeeEEeeeEEEeecccchHHHHHhcCchhhccC-CCCcccccC---
Confidence            99999987 7999999997  3445555555556678999999999999999999999999999985 899999998   


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCC
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL  389 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~  389 (391)
                      ..+++|++++|++.|+|||+|++|+|+|++.+..++.    +..|+|||||+|+|+|+.||.|||+|||.+|.
T Consensus       305 ~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~~~----~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~  373 (373)
T 2vdx_A          305 DAQLKSSKVVHKAVLQLNEEGTEAAGAMFLEAIPRSK----PIILRFNQPFIIMIFDHFTWSSLFLARVMNPV  373 (373)
T ss_dssp             SCCEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEC-C----CEEEECCSCEEEEEEETTTCCEEEEEEESCCC
T ss_pred             CCCeEEeeeeeeeeEEecCCcccccccccccccccCC----CceEEecCCEEEEEEECCCCcEEEEEEeCCCC
Confidence            4689999999999999999999999999865443332    46899999999999999999999999999995


No 18 
>1sek_A Serpin K; serine protease inhibitor, protease; 2.10A {Manduca sexta} SCOP: e.1.1.1 PDB: 1k9o_I
Probab=100.00  E-value=1.5e-83  Score=619.10  Aligned_cols=369  Identities=28%  Similarity=0.467  Sum_probs=325.3

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHHhh
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVVFA   82 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l~~   82 (391)
                      |..+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..+.....++.+...+. 
T Consensus         8 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~-   85 (378)
T 1sek_A            8 QKILRESNDQFTAQMFSEVV-KANPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDNVTKDVFADLNRGVR-   85 (378)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HTSTTSCEEECSTTTHHHHHHHHHHCCHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCS-
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hcCCCCCEEEcHHHHHHHHHHHHhhcCCcHHHHHHHHhCCCCCchHHHHHHHHHHHHh-
Confidence            34677899999999999998 4567899999999999999999999999999999999999875322245666665443 


Q ss_pred             CCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCc
Q 016311           83 DGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNS  162 (391)
Q Consensus        83 ~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~  162 (391)
                         ..++..++++|++|+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|++++++++++++
T Consensus        86 ---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll~~~~l~~~  161 (378)
T 1sek_A           86 ---AVKGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVK-SVEAAGAINKWVEDQTNNRIKNLVDPDALDET  161 (378)
T ss_dssp             ---CCTTEEEEEEEEEEEETTSCBCHHHHHHHHHTTCCEEEEECGGG-HHHHHHHHHHHHHHHTTTSSCCCSCGGGCCTT
T ss_pred             ---ccCCCeEEeeeehhhhCCCCHhHHHHHHHHHHhCCeeEeeCCcC-HHHHHHHHHHHHHHHhCCcccccCCcccCCCC
Confidence               12456799999999999999999999999999999999999975 78899999999999999999999998899999


Q ss_pred             CeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCCCceEEEEEEe
Q 016311          163 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFSMYFFL  240 (391)
Q Consensus       163 t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~~~~~sm~iil  240 (391)
                      |+++|+||+||+|.|+.+|++..|.+++|+..+|++++||||++.+.++|++.+  ++++|+|||+++    ++||+|||
T Consensus       162 t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~vleLPy~~~----~~sm~iiL  237 (378)
T 1sek_A          162 TRSVLVNAIYFKGSWKDKFNKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVPELDAKMIEMSYEGD----QASMIIIL  237 (378)
T ss_dssp             CCEEEEEEEEEEECBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEEEGGGTEEEEEEEBGGG----SEEEEEEE
T ss_pred             CeEEEEEeeEEeccccCCCCCCCcccceEEeCCCEEEEeeEEEeeceEeEEEeCCCCeEEEEEECCCC----cEEEEEEE
Confidence            999999999999999999999999999999999999999999999877777644  789999999987    79999999


Q ss_pred             cCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCCCe
Q 016311          241 PDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGKNL  320 (391)
Q Consensus       241 P~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~~l  320 (391)
                      |++..+|.+++++|+. ...+..|.+..+...++|.||||++++++||+++|++||++++|+...|||++|++.  ..++
T Consensus       238 P~~~~~l~~l~~~L~~-~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfs~i~~~--~~~l  314 (378)
T 1sek_A          238 PNQVDGITALEQKLKD-PKALSRAEERLYNTEVEIYLPKFKIETTTDLKEVLSNMNIKKLFTPGAARLENLLKT--KESL  314 (378)
T ss_dssp             ESSTTTHHHHHHHTTS-TTHHHHHHTTCEEEEEEEEEECEEEEEEEEHHHHHHHTTCCGGGSTTTCCCTTTBTT--CCCC
T ss_pred             eCCCCCHHHHHHHhcc-hhHHHHHHHhccceEEEEEeeeEEeecccccHHHHHhcCCcccccCCcCCchhhcCC--CCCe
Confidence            9998899999999982 124556666666677899999999999999999999999999995448999999873  2579


Q ss_pred             eEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          321 YVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       321 ~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                      +|++++|++.|+|||+|++|+|+|++.+..++.+.  +.+|++||||+|+|+|  +++|||+|||.+|
T Consensus       315 ~vs~v~hka~ieV~E~GteAaAaT~~~~~~~~~~~--~~~f~~drPFlf~I~~--~~~iLF~G~v~~P  378 (378)
T 1sek_A          315 YVDAAIQKAFIEVNEEGAEAAAANAFKITTYSFHF--VPKVEINKPFFFSLKY--NRNSMFSGVCVQP  378 (378)
T ss_dssp             CCCEEEEEEEEEECSCBSSCTTSSTTCCCCSCCCC--CCEEECCSCEEEEEEE--TTEEEEEEEESCC
T ss_pred             EEeeeeeEEEEEeCCCCcccccccchhhccccCCC--CCeEEecCCEEEEEEe--CCEEEEEEEecCC
Confidence            99999999999999999999999986555455432  3479999999999999  6899999999998


No 19 
>3pzf_A Serpin 2; protease inhibitor, melanization, hydrolase inhibito; 1.75A {Anopheles gambiae}
Probab=100.00  E-value=2.6e-83  Score=618.78  Aligned_cols=369  Identities=25%  Similarity=0.449  Sum_probs=321.5

Q ss_pred             hhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhh------HHHHHhhcCCCC-hhHHHHHHHHHHHH
Q 016311            7 ISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPT------LDQLLSFLKSKS-NDQLNAFASELVAV   79 (391)
Q Consensus         7 ~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t------~~el~~~L~~~~-~~~~~~~~~~l~~~   79 (391)
                      ...+++||++||++++.  .+++|++|||+||+.+|+|+++||+|+|      .+|+.+.|++.. .++++..++.++..
T Consensus        19 ~~~~~~Fa~~L~k~l~~--~~~~Ni~~SP~SI~~aLaml~~GA~G~T~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ll~~   96 (397)
T 3pzf_A           19 GQRQNEFDLMFVKEIFK--NHNSNVVLSPFSVKILLTLIYEASDTSFGNAVSNTKRELSSVIQNDNIDHTRSYYKQLLES   96 (397)
T ss_dssp             SCCCCHHHHHHHHHHHH--TCSSCEEECHHHHHHHHHHHHHHSGGGCC-CCCHHHHHGGGGSSTTCHHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHh--CCCCCEEEchHHHHHHHHHHHhhcCCCCccChHHHHHHHHHcCCCCchHHHHHHHHHHHHH
Confidence            35789999999999983  6789999999999999999999999998      777777776643 35677778888887


Q ss_pred             HhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCC
Q 016311           80 VFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSV  159 (391)
Q Consensus        80 l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~  159 (391)
                      +.+   ..++..+.++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++++.+
T Consensus        97 l~~---~~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll~~~~~  172 (397)
T 3pzf_A           97 AQQ---DNKDYDLNIATNFFVDDFIEVINKYQQIANTHYHAMLEKVSYSN-PTQTAATINNWVSEHTNGRLREIVTPDSL  172 (397)
T ss_dssp             HHC---CCSSCEEEEEEEEEEETTCCBCHHHHHHHHHHHCEEEEEECTTS-HHHHHHHHHHHHHHHTTTSCCCCCCGGGG
T ss_pred             Hhc---CCCCcEEEEeeeeeEeCCCccchHHHHHHHHHhCCeEEEeCCCC-hHHHHHHHHHHHHHHhCCcccccCCCCCc
Confidence            753   34567899999999999999999999999999999999999987 68899999999999999999999987778


Q ss_pred             CCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecCCCCCCceEEEE
Q 016311          160 DNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYKQGEDKRRFSMY  237 (391)
Q Consensus       160 ~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~~~~~~~~~sm~  237 (391)
                      + +|.++|+||+||+|.|+.+|++..|..++|+..+|++++||||++.+.++|...  .++++++|||+++    .+||+
T Consensus       173 ~-~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~~~y~~~~~l~~~vleLPy~~~----~~sm~  247 (397)
T 3pzf_A          173 E-GAVITLVNVIYFKGLWTYPFPEVANNVKPFYGTRGKPTNAQYMEQNGQFYYDNSADLGAQILRLPYRGN----KLAMY  247 (397)
T ss_dssp             T-TCSEEEEEEEEEEEEBSSCCCCCSCCEEEECCSSSSCEEEEEEEEEEEEEEEEETTTTEEEEEEEBTTS----SEEEE
T ss_pred             c-cceeEEeeheecccccCccCCcccccccccccCCCcEEEEEEEEecCCcCeEEccCCCEEEEEEEcCCC----ceEEE
Confidence            7 899999999999999999999999999999999999999999999988777654  4899999999987    79999


Q ss_pred             EEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC-
Q 016311          238 FFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV-  316 (391)
Q Consensus       238 iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~-  316 (391)
                      ||||++..+|.+++++|+  ...+.+|....+...++|.||||++++++||+++|++||++++|++ .||||+|++... 
T Consensus       248 iiLP~~~~~l~~le~~L~--~~~l~~~~~~~~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~~~~~  324 (397)
T 3pzf_A          248 FILPNPDNTVNQVLDRIN--SASLHQALWYMEENEVNVTLPKFKFDFSEQLNEPLQQVGIREIFSQ-NASLPLLARGRGA  324 (397)
T ss_dssp             EEEECTTSCHHHHHHHCC--HHHHHHHHHTCEEEEEEEEEECEEEEEEEESHHHHHHTTCCGGGST-TCCCTTTBCC---
T ss_pred             EEECCCCCCHHHHHHhhC--HHHHHHHHhhCceEEEEEEcCcEEEEeccChHHHHHhCCchhhcCC-CCCcccccCCCCC
Confidence            999999889999999997  4566667666667778999999999999999999999999999998 699999997320 


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ..+++|++++|++.|+|||+|++|+|+|++.+..++.+.+.+ .|+|||||+|+|+|+.||.|||+|+|.+|.+
T Consensus       325 ~~~l~vs~v~hka~ieVnE~GteAAAaT~~~~~~~~~~~~~~-~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~  397 (397)
T 3pzf_A          325 RDEVRVSRIFQKAGITINELGSEAYAATEIQLVNKFGGDGVQ-IFNANRPFIFFIEDETLGTMLFAGKIENPVF  397 (397)
T ss_dssp             --CCCCCEEEEEEEEEECSSEESCCCCSCC--------CCCE-EEECCSCEEEEEEETTTCCEEEEEEESSCCC
T ss_pred             CCceEEEeEEEEEEEEECCCccccccccceeeeccccCCCCC-eEEecCCEEEEEEECCCCcEEEEEEecCCcC
Confidence            135999999999999999999999999986555444322223 4999999999999999999999999999974


No 20 
>3f1s_A Protein Z-dependent protease inhibitor; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} PDB: 3h5c_A*
Probab=100.00  E-value=2.2e-83  Score=619.37  Aligned_cols=366  Identities=26%  Similarity=0.413  Sum_probs=329.6

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC----hhHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----NDQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~----~~~~~~~~~~l~~   78 (391)
                      +.++..++++||++||+++. ...++ |++|||+||+.+|+|+++||+|+|++||.++||++.    .++++..++.+..
T Consensus        13 ~~~l~~~~~~Fa~~l~~~l~-~~~~~-Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~   90 (385)
T 3f1s_A           13 RQQLAKETSNFGFSLLRKIS-MRHDG-NMVFSPFGMSLAMTGLMLGATGPTETQIKRGLHLQALKPTKPGLLPSLFKGLR   90 (385)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHCCS-CEEECHHHHHHHHHHHTTTCCTHHHHHHHHHTTCTTCCCSSTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hCCCC-cEEEchHHHHHHHHHHHHhcchHHHHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence            55677899999999999998 34556 999999999999999999999999999999999985    2678889999888


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+.+   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|++++  ++
T Consensus        91 ~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~l~--~~  164 (385)
T 3f1s_A           91 ETLS---RNLELGLTQGSFAFIHKDFDVKETFFNLSKRYFDTECVPMNFRN-ASQAKRLMNHYINKETRGKIPKLF--DE  164 (385)
T ss_dssp             HHHH---HCSSSCEEEEEEEEEETTSCBCHHHHHHHHHHHCEEEEEECCSS-HHHHHHHHHHHHHHHTTTSSSCCC--SC
T ss_pred             Hhhc---CCCCcEEEEEEEEEEECCCchhHHHHHHHHHHhCCeeEEeCCCC-hHHHHHHHHHHHHHHhcCchhhHh--hc
Confidence            8764   23557899999999999999999999999999999999999985 789999999999999999999999  57


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCCCceEEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFSM  236 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~~~~~sm  236 (391)
                      ++++|+++|+||+||+|.|+.+|++..|.+++|+..+|++++||||++.+.++|++.+  ++++|+||| ++    ++||
T Consensus       165 l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~vleLPy-~~----~~sm  239 (385)
T 3f1s_A          165 INPETKLILVDYILFKGKWLTPFDPVFTEVDTFHLDKYKTIKVPMMYGAGKFASTFDKNFRCHVLKLPY-QG----NATM  239 (385)
T ss_dssp             CCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEEETTTTEEEEEEEE-TT----TEEE
T ss_pred             cCCCCeEEEEEhhhccchhcCCCCccCccceEEEECCCEEEEEEEEeccCcccEEEeCCCCeEEEEecC-CC----cEEE
Confidence            9999999999999999999999999999999999999999999999999877776644  789999999 65    7999


Q ss_pred             EEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC
Q 016311          237 YFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV  316 (391)
Q Consensus       237 ~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~  316 (391)
                      +||||++..+|.+++++|+  ...+.+|.+..+...++|.||||++++++||+++|++||++++|+. .|||++|++.  
T Consensus       240 ~iiLP~~~~~L~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~-~Adfs~is~~--  314 (385)
T 3f1s_A          240 LVVLMEKMGDHLALEDYLT--TDLVETWLRNMKTRNMEVFFPKFKLDQKYEMHELLRQMGIRRIFSP-FADLSELSAT--  314 (385)
T ss_dssp             EEEEECTTSCHHHHGGGCC--HHHHHHHHHTCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCTTTBCC--
T ss_pred             EEEeCCCCCCHHHHHHHhh--HHHHHHHHHhccceeeEEeeeEEEEEeeecHHHHHHhcCccccccC-CCCcccccCC--
Confidence            9999999889999999997  3456666666667778999999999999999999999999999995 8999999872  


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      +.+++|++++|++.|+|||+|++|+|+|++.+..+    +.+.+|+|||||+|+|+|+.||.|||+|||.+|..
T Consensus       315 ~~~l~vs~v~hka~ieV~E~GteAaAaT~~~~~~~----~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~  384 (385)
T 3f1s_A          315 GRNLQVSRVLQRTVIEVDERGTEAVAGILSEITAY----SMPPVIKVDRPFHFMIYEETSGMLLFLGRVVNPTL  384 (385)
T ss_dssp             CSCCCCCEEEEEEEEEECSCBCCCCCCCCCCCCSS----CCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTC
T ss_pred             CCCeEEEEEEEeeEEEecCCcceeccccccccccC----CCCCEEEecCCEEEEEEECCCCcEEEEEEeCCCCC
Confidence            25799999999999999999999999998544332    23568999999999999999999999999999975


No 21 
>3ozq_A Serpin48; SPE, hydrolase I; 1.90A {Tenebrio molitor}
Probab=100.00  E-value=3.3e-83  Score=615.83  Aligned_cols=364  Identities=29%  Similarity=0.495  Sum_probs=320.1

Q ss_pred             chhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh-hHHHHHHHHHHHHH
Q 016311            2 DVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN-DQLNAFASELVAVV   80 (391)
Q Consensus         2 ~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~-~~~~~~~~~l~~~l   80 (391)
                      ++..+..++++||++||+++.  ..+++|++|||+||+.+|+|+++||+|+|++||.++||++.. .+++..++.++..+
T Consensus         7 ~~~~l~~~~~~Fa~~l~~~l~--~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~l~~l   84 (376)
T 3ozq_A            7 TLQEFPNAVNSFTPSVYKEVL--KTEKANFLVSPFSAATLLALAQSGCRGDTAEEIRQVLHFVGDREKAEGAVKEVLSKL   84 (376)
T ss_dssp             --CHHHHHHHHHHHHHHHHHH--HHCCSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHhHHHHHHHHHHh--hCCCCCEEEcHHHHHHHHHHHHhHCchHHHHHHHHHHCCCCcHHHHHHHHHHHHHHh
Confidence            567788999999999999996  257889999999999999999999999999999999999654 45666777776654


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      .     ..+..+.++|+||+++++++.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|++++++++++
T Consensus        85 ~-----~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~wV~~~T~gkI~~ll~~~~l~  158 (376)
T 3ozq_A           85 T-----NEEYTLHTANKIYVKTNFSVREEFQKIAVEVYGAQSENVDFSE-KNDAAKLMNAWVEEQTQHKIQNLVDPEILN  158 (376)
T ss_dssp             B-----CSSCEEEEEEEEEEETTSCCCHHHHHHHHHTTSCEEEEECCSS-HHHHHHHHHHHHHHHTTTCSCCCSCGGGCC
T ss_pred             c-----CCCcEEeeehhHHHhCCCcchHHHHHHHHHhhCCeeEEecCCC-hHHHHHHHHHHHHhhhcCchhhccCcccCC
Confidence            2     2345899999999999999999999999999999999999998 478999999999999999999999888999


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccc-cccccccccc--CCeEEEEeecCCCCCCceEEEE
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMT-SKKNQFVSAF--DGFKVLGLPYKQGEDKRRFSMY  237 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~-~~~~~~~~~~--~~~~vveLp~~~~~~~~~~sm~  237 (391)
                      ++|+++|+||+||+|.|+.||++..|..++|+..+|++++||||+ +.+.++|++.  .++++++|||+++     +||+
T Consensus       159 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~~~~~vleLPy~~~-----~sm~  233 (376)
T 3ozq_A          159 NLTRVVLINALYFNAKWLVPFPPFHTRKSDFHKSAKEVVQVDTMYLDEQYFNYYECHHLDAKLLELPFKGG-----ASLT  233 (376)
T ss_dssp             TTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBTTS-----CEEE
T ss_pred             CcceEEEEehhhhhhhhccCCCcccceeeeeEecCCcEEEEeehhhccCceeEEEecCCCeEEEEEeCCCC-----EEEE
Confidence            999999999999999999999999999999999999999999999 8887777654  4799999999985     9999


Q ss_pred             EEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCC
Q 016311          238 FFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVG  317 (391)
Q Consensus       238 iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~  317 (391)
                      ||||+++.+|.+++++|+.  ..+.+   ..+...++|.||||++++++||+++|++||++++|+. .||||+|++   .
T Consensus       234 iiLP~~~~~l~~l~~~L~~--~~l~~---~~~~~~v~v~lPKF~i~~~~~L~~~L~~lGi~~~F~~-~Adfs~is~---~  304 (376)
T 3ozq_A          234 IVLSNQIEGLVSLESKIKR--SFLPH---NLTKQLVNVALPKFKIESTVDFKKVLKKLGVKKAFGD-EADLSGIAG---E  304 (376)
T ss_dssp             EEEESSTTCHHHHHHTHHH--HHSCC---CCEEEEEEEEEECEEEEEEEEHHHHHHHHTCCGGGST-TCCCTTTSS---S
T ss_pred             EEeCCCCCCHHHHHHHhCH--HHHHh---hCCeeEEEEEcccEEeecccchHHHHHhcCchhhcCC-CCCCccccC---C
Confidence            9999998899999999973  33433   3455678999999999999999999999999999995 899999998   3


Q ss_pred             C-CeeEeeeeeeeEEEEcCCCchhhhhhhhhhh-hhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCC
Q 016311          318 K-NLYVSSIFQKSFIEVNEEGTEAAAASAATVV-LRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL  389 (391)
Q Consensus       318 ~-~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~-~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~  389 (391)
                      . +++|++++|++.|+|||+|++|+|+|++.+. .++++..++.+|++||||+|+|+|+  |.|||+|||.+|.
T Consensus       305 ~~~l~vs~v~hka~ieV~E~GteAaAaT~~~~~~~~s~~~~~p~~f~~drPFlf~I~~~--~~iLF~G~v~~p~  376 (376)
T 3ozq_A          305 KGDLVISNIVQKSFIDVSEEGVEAAAATYIPVILPEMALPDSPKQFIVDHPFIFYIKVK--GMILFAGRVTTLN  376 (376)
T ss_dssp             TTSCCEEEEEEEEEEEECSSEESCCCCCCCCC---------CCEEEECCSCEEEEEEET--TEEEEEEEECCCC
T ss_pred             CCCeEEeeeEeeEEEEECCCCccccccceeeecccccccCCCCceEEeECCEEEEEEEC--CEEEEEEEecCCC
Confidence            4 8999999999999999999999999986555 5554333356899999999999999  8999999999994


No 22 
>4ajt_A Protein Z-dependent protease inhibitor; blood clotting, ZPI; 2.50A {Mus musculus}
Probab=100.00  E-value=3.3e-83  Score=621.76  Aligned_cols=364  Identities=25%  Similarity=0.409  Sum_probs=320.2

Q ss_pred             hhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCC-----ChhHHHHHHHHHHH
Q 016311            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSK-----SNDQLNAFASELVA   78 (391)
Q Consensus         4 ~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~-----~~~~~~~~~~~l~~   78 (391)
                      ..+..++++||++||++++. ..++ |+||||+||+.+|+|+++||+|+|++||.++||++     ..++++..++.+..
T Consensus        56 ~~l~~~~~~Fa~~L~~~l~~-~~~~-Niv~SP~SI~~aLaml~~GA~G~T~~el~~~L~~~~~~~~~~~~i~~~f~~l~~  133 (427)
T 4ajt_A           56 QQLSNETSSFGFNLLRKISM-RHDG-NVIFSPFGLSVAMVNLMLGTKGETKVQIENGLNLQALSQAGPLILPALFKKVKE  133 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HCCS-CEEECHHHHHHHHHHHHHHCCTHHHHHHHHHHTCHHHHTSCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cCCC-CEEEchHHHHHHHHHHHhhcCchHHHHHHHHhCCCccccCCHHHHHHHHHHHHH
Confidence            45678899999999999973 3445 99999999999999999999999999999999998     34788999999988


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+.    +..+..+.++|+||+++++.+.++|++.++++|++++..+||.+ ++.+++.||+||+++|+|+|++++  ++
T Consensus       134 ~l~----~~~~~~L~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll--~~  206 (427)
T 4ajt_A          134 TFS----SNRDLGLSQGSFAFIHKDFDIKETYFNLSKKYFDIEYVSINFQN-SSQARGLINHCIVKETEGKIPKLF--DE  206 (427)
T ss_dssp             HHH----TCTTSCEEEEEEEEEETTSCCCHHHHHHHHHHSCCCEEEECTTS-HHHHHHHHHHHHHHHTTTSSCSCC--SC
T ss_pred             HhC----CCCCceehhhhHHHHccCCchhHHHHHHHHHhhcceeEEcCCCC-hHHHHHHHHHHHHHhhCCcccccc--cC
Confidence            875    23567899999999999999999999999999999999999964 788999999999999999999999  58


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc--cCCeEEEEeecCCCCCCceEEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA--FDGFKVLGLPYKQGEDKRRFSM  236 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLp~~~~~~~~~~sm  236 (391)
                      ++++|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.+.|..  ..++++|+|||++     ++||
T Consensus       207 l~~~T~lvLvNAiyFKg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~f~~~~~~~l~~~vleLPY~~-----~~sm  281 (427)
T 4ajt_A          207 INPETKLILVDYVLFKGKWLTPFDPSFTEADTFHLDKYRAIKVPMMYREGNFTSTFDKKFRCHILKLPYQG-----NATM  281 (427)
T ss_dssp             CCTTCCEEEEEEEEECCCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEEGG-----GEEE
T ss_pred             CCCcceeEEeeeeeeeeeecCCCChhhccccceeccCCCEEEEEEEEecCceeEEEecCCceEEEEEEcCC-----CeEE
Confidence            99999999999999999999999999999999999999999999999988766544  4589999999997     4999


Q ss_pred             EEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC
Q 016311          237 YFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV  316 (391)
Q Consensus       237 ~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~  316 (391)
                      +||||++..+|.+++++|+  ...+..|....+...++|.||||++++++||+++|++||++++|++ .||||+|++.  
T Consensus       282 ~iiLP~~~~~L~~le~~L~--~~~l~~~~~~l~~~~v~v~LPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~~--  356 (427)
T 4ajt_A          282 LVVLMEKTGDYLALEDYLT--VDLVETWLQNMKTRKMEVFFPKFKLNQRYEMHELLKQMGIRRLFST-SADLSELSAM--  356 (427)
T ss_dssp             EEEEECTTSCHHHHTTTCC--HHHHHHHHHTCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCTTTCSS--
T ss_pred             EEEecCCCCCHHHHHHhcC--HHHHHHHHHhCcceEEEEeccCEEEEeccChHHHHHHcCCchhhcC-CCCcccccCC--
Confidence            9999999779999999997  3456666666666778999999999999999999999999999998 8999999872  


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ..+++|++++|++.|+|||+|++|+|+|++.+..++.    +..|+|||||+|+|+|+.||.|||+|||.+|..
T Consensus       357 ~~~l~Vs~v~hka~ieVnEeGteAAAaT~~~~~~~s~----p~~f~adrPFlF~I~d~~t~~iLF~G~v~~P~~  426 (427)
T 4ajt_A          357 ARNLQVSRVLQQSVLEVDERGTEAVSGTLSEIIAYSM----PPAIKVNRPFHFIIYEEMSRMLLFLGRVVNPTV  426 (427)
T ss_dssp             CSSCCCCEEEEEEEEEECSCBCC-------CCBCCSS----CCEEECCSCEEEEEEETTTTEEEEEEEESSCC-
T ss_pred             CCCceEEEEEEEEEEEECCCcccccccceeeecccCC----CCEEEEeCCEEEEEEECCCCcEEEEEEeCCCCC
Confidence            2689999999999999999999999999865544442    358999999999999999999999999999975


No 23 
>1yxa_A Serine (OR cysteine) proteinase inhibitor, clade 3N; serpin, antichymotrypsin, protease inhibitor, reactive centr plasma, hydrolase inhibitor; 2.10A {Mus musculus}
Probab=100.00  E-value=7.6e-83  Score=617.77  Aligned_cols=367  Identities=28%  Similarity=0.419  Sum_probs=326.6

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC----hhHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----NDQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~----~~~~~~~~~~l~~   78 (391)
                      +..+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++.    .++++..++.+..
T Consensus        24 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~  102 (398)
T 1yxa_A           24 SLTLASINTDFAFSLYKELV-LKNPDTNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQ  102 (398)
T ss_dssp             ---CHHHHHHHHHHHHHHHH-HHSTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hcCCCCCEEEchHHHHHHHHHHHhhcccHHHHHHHHHhCCCcccCCHHHHHHHHHHHHH
Confidence            45667889999999999997 456789999999999999999999999999999999999974    2578888999988


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+..   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  +
T Consensus       103 ~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll~--~  176 (398)
T 1yxa_A          103 RLNQ---PKDQVQISTGSALFIEKRQQILTEFQEKAKTLYQAEAFTADFQQ-PRQAKKLINDYVRKQTQGMIKELVS--D  176 (398)
T ss_dssp             HHSS---CBTTBEEEEEEEEEEETTSCCCHHHHHHHHHHHSCEEEEECTTS-HHHHHHHHHHHHHHHTTTSSSCCCC--C
T ss_pred             HHhC---CCCCceeeeeeEEEEeCCCchhHHHHHHHHHHhCCceeecCCCC-HHHHHHHHHHHHHHHhcCchhhhhh--c
Confidence            8753   23557899999999999999999999999999999999999985 7889999999999999999999996  4


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccc-ccccccc--CCeEEEEeecCCCCCCceEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK-NQFVSAF--DGFKVLGLPYKQGEDKRRFS  235 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~-~~~~~~~--~~~~vveLp~~~~~~~~~~s  235 (391)
                      ++++|+++|+||+||+|.|+.+|++..|..++|+..+|++++||||++.+ .++|+..  .++++++|||+++     .+
T Consensus       177 l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~l~~~vleLPY~~~-----~s  251 (398)
T 1yxa_A          177 LDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYCGKRRPVIVPMMSMEDLTTPYFRDEELSCTVVELKYTGN-----AS  251 (398)
T ss_dssp             CCTTCCEEEEEEEEEECBBSSCCCGGGCEEEEECCCCSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSSS-----EE
T ss_pred             cCCCcEEEEEEHHhhhhhhhCCCCcccCeeeEEEeCCCeEEEEEEEEEcCceEEEEEeCCCCeEEEEEecCCC-----ee
Confidence            99999999999999999999999999999999999999999999999998 7777654  4799999999986     59


Q ss_pred             EEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeee-eeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCC
Q 016311          236 MYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVG-DFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDS  314 (391)
Q Consensus       236 m~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v-~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~  314 (391)
                      |+||||+++ +|.+++++|+  ...+..|.+..+...+ +|.||||++++++||+++|++||++++|+. .||||+|++ 
T Consensus       252 m~iiLP~~~-~L~~le~~L~--~~~l~~~~~~~~~~~v~~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~-  326 (398)
T 1yxa_A          252 ALFILPDQG-RMQQVEASLQ--PETLRKWKNSLKPRMIDELHLPKFSISTDYSLEDVLSKLGIREVFST-QADLSAITG-  326 (398)
T ss_dssp             EEEEEECTT-CHHHHHHTCS--HHHHHHHHHHCEEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCHHHHS-
T ss_pred             EEEEecCcC-cHHHHHHHhC--HHHHHHHHHhccceeeeEEecceEEeecccchHHHHHHcCcccccCC-cCCcccCCC-
Confidence            999999986 5999999997  3455556555556678 999999999999999999999999999995 899999998 


Q ss_pred             CCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCC
Q 016311          315 PVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL  389 (391)
Q Consensus       315 ~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~  389 (391)
                        ..+++|++++|++.|+|||+|++|+|+|++.+..++.+ +++.+|+|||||+|+|+|+.||.|||+|||.+|.
T Consensus       327 --~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~s~~-~~~~~f~~drPFlF~I~~~~t~~iLF~G~v~~P~  398 (398)
T 1yxa_A          327 --TKDLRVSQVVHKAVLDVAETGTEAAAATGVKFVPMSAK-LYPLTVYFNRPFLIMIFDTETEIAPFIAKIANPK  398 (398)
T ss_dssp             --SSCCCCCEEEEEEEEEECSSBSSCCCCCSCCCCCCCCC-SSCCEEECCSCEEEEEEETTTCCCSEEEEESCCC
T ss_pred             --CCCeEEEEEEEEEEEEEcCCccccccccchhhcccccC-CCCCeEEecCCEEEEEEECCCCcEEEEEEecCCC
Confidence              46899999999999999999999999998655555443 2356899999999999999999999999999995


No 24 
>1qmn_A AACT, alpha-1-antichymotrypsin; serpin, serine proteinase inhibitor, partial loop insertion, loop-sheet polymerization, emphysema, disease mutation; 2.27A {Homo sapiens} SCOP: e.1.1.1 PDB: 3dlw_A
Probab=100.00  E-value=2.6e-83  Score=621.61  Aligned_cols=367  Identities=27%  Similarity=0.421  Sum_probs=323.9

Q ss_pred             hhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----hHHHHHHHHHHHHH
Q 016311            5 ESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----DQLNAFASELVAVV   80 (391)
Q Consensus         5 ~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----~~~~~~~~~l~~~l   80 (391)
                      .+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..    ++++..++.+...+
T Consensus        26 ~l~~~~~~Fa~~l~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l  104 (401)
T 1qmn_A           26 GLASANVDFAFSLYKQLV-LKAPDKNVIFSPPSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQHLLRTL  104 (401)
T ss_dssp             -CHHHHHHHHHHHHHHHH-HHCSSSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH-hcCCCCCEEEecHHHHHHHHHHHhhccCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH
Confidence            567789999999999997 4567899999999999999999999999999999999999742    57888999998887


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      ..   ...+..+.++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  +++
T Consensus       105 ~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll~--~l~  178 (401)
T 1qmn_A          105 NQ---SSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQD-SAAAKKLINDYVKNGTRGKITDLIK--DLD  178 (401)
T ss_dssp             CC---CSSSCEEEEEEEEEEESSCCCCHHHHHHHHHHHCCEEEEECGGG-HHHHHHHHHHHCSSEEEEEEEECC------
T ss_pred             hc---CCCCceEEEEEEEEeeCCCchHHHHHHHHHHhcCCeEEecCccC-HHHHHHHHHHHHHHHhcCchhhhcc--CCC
Confidence            53   34567899999999999999999999999999999999999985 7889999999999999999999996  499


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccc-ccccccC--CeEEEEeecCCCCCCceEEEE
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN-QFVSAFD--GFKVLGLPYKQGEDKRRFSMY  237 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~-~~~~~~~--~~~vveLp~~~~~~~~~~sm~  237 (391)
                      ++|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+. ++|+..+  ++++|+|||+++     .+|+
T Consensus       179 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~l~~~vleLPY~~~-----~sm~  253 (401)
T 1qmn_A          179 SQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRDEELSCTVVELKYTGN-----ASAL  253 (401)
T ss_dssp             CCCCEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSSS-----EEEE
T ss_pred             CCceEEEEEeeeeeehhcCCCChhcCccceEEcCCCcEEEeeEEEEcCceEEEEEeCCCceEEEEEecCCC-----eEEE
Confidence            9999999999999999999999999999999999999999999999987 7776644  799999999986     5999


Q ss_pred             EEecCCCCChHHHHHHhcCchHHHhhcCCCCceeee-eeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC
Q 016311          238 FFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVG-DFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV  316 (391)
Q Consensus       238 iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v-~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~  316 (391)
                      ||||++ .+|.+++++|+  ...+.+|.+..+...+ +|.||||++++++||+++|++|||+++|+. .|||++|++   
T Consensus       254 iiLP~~-~~L~~le~~L~--~~~l~~~~~~~~~~~v~~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~---  326 (401)
T 1qmn_A          254 FILPDQ-DKMEEVEAMLL--PETLKRWRDSLEFREIGELYLPKFSISRDYNLNDILLQLGIEEAFTS-KADLSGITG---  326 (401)
T ss_dssp             EEEECT-TCHHHHHTTCS--HHHHHHHHHSCEEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCHHHHS---
T ss_pred             EEEECC-CCHHHHHHHhC--HHHHHHHHHhCcceEcceEeeeeEEEeccccHHHHHHhcCccccccC-cCCcccccC---
Confidence            999988 68999999997  3456666666666778 999999999999999999999999999985 899999998   


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ..+++|++++|++.|+|||+|++|+|+|++.+..++.+.+++.+|+|||||+|+|+|+.||.|||+|||.+|..
T Consensus       327 ~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~s~~~~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~  400 (401)
T 1qmn_A          327 ARNLAVSQVVHKAVLDVFEEGTEASAATAVKITLLSALVETRTIVRFNRPFLMIIVPTDTQNIFFMSKVTNPKQ  400 (401)
T ss_dssp             SSCEEEEEEEEEEEEEECSSEEESSCCCC-----CCCCCCCSCEEECCSCEEEEEEETTSSCCSEEEEESCTTC
T ss_pred             CCCeEEEeeeeEEEEEeCCCccccccccchhhccccCCCCCCceEEecCCEEEEEEECCCCcEEEEEEcCCCCC
Confidence            46899999999999999999999999998665555543333478999999999999999999999999999975


No 25 
>3b9f_I Protein C inhibitor; michaelis complex, acute phase, blood coagulation, cleavage of basic residues, disease mutation; HET: NAG FUC SGN IDS; 1.60A {Homo sapiens} PDB: 2ol2_A*
Probab=100.00  E-value=3.7e-82  Score=611.88  Aligned_cols=363  Identities=26%  Similarity=0.447  Sum_probs=316.9

Q ss_pred             hhhhhhhh-hHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----hHHHHHHHHHH
Q 016311            3 VRESISNQ-TDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----DQLNAFASELV   77 (391)
Q Consensus         3 ~~~~~~~~-~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----~~~~~~~~~l~   77 (391)
                      +..+..++ ++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..    ++++..++.+.
T Consensus        26 ~~~l~~~~~~~Fa~~L~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~i~~~~~~l~  104 (395)
T 3b9f_I           26 GATVAPSSRRDFTFDLYRALA-SAAPSQNIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLL  104 (395)
T ss_dssp             ----------CHHHHHHHHHH-HHSTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTC----CCHHHHHHHHHHHH
T ss_pred             HHHHHHhhHHHHHHHHHHHHh-ccCCCCCEEEcHHHHHHHHHHHHHHcccHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            45567788 999999999997 4567899999999999999999999999999999999999742    57888899988


Q ss_pred             HHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCC
Q 016311           78 AVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPG  157 (391)
Q Consensus        78 ~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~  157 (391)
                      ..+.+   +..+..++++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  
T Consensus       105 ~~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll~--  178 (395)
T 3b9f_I          105 QELNQ---PRDGFQLSLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRD-SAGAMKQINDYVAKQTKGKIVDLLK--  178 (395)
T ss_dssp             HHTTS---CCTTCCEEEEEEEEEETTCCBCHHHHHHHHHHHCCEEEEECTTS-HHHHHHHHHHHHHHHTTTSSCCCCS--
T ss_pred             HHHhC---CCCCceeEEEEEEEEECCCccchHHHHHHHHHhCCEeEEcCCCC-HHHHHHHHHHHHHHHhCCchhhhcc--
Confidence            87753   33567899999999999999999999999999999999999975 7889999999999999999999996  


Q ss_pred             CCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecCCCCCCceEE
Q 016311          158 SVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYKQGEDKRRFS  235 (391)
Q Consensus       158 ~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~~~~~~~~~s  235 (391)
                      +++++|+++|+||+||+|.|+.+|++..|.+++|+..+|++++||||++.+.++|+..  .++++|+|||+++     .+
T Consensus       179 ~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~f~y~~~~~l~~~vleLPY~~~-----~s  253 (395)
T 3b9f_I          179 NLDSNAVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLDRNLSCRVVGVPYQGN-----AT  253 (395)
T ss_dssp             CCCTTCSEEEEEEEEECCCEEECCCTTTCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSSS-----CE
T ss_pred             CCCCCceEEEEEhheeeccccCCCChhhCeeeEEEeCCCeEEEEEEEEeeeeEeEEEECCCCeEEEEEecCCC-----ee
Confidence            4999999999999999999999999999999999999999999999999987776554  4899999999986     49


Q ss_pred             EEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCC
Q 016311          236 MYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSP  315 (391)
Q Consensus       236 m~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~  315 (391)
                      |+||||++ .+|.+++++|+  ...+.+|.+..+...++|.||||++++++||+++|++||++++|+. .|||++|++  
T Consensus       254 m~iiLP~~-~~L~~le~~L~--~~~l~~~~~~l~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~--  327 (395)
T 3b9f_I          254 ALFILPSE-GKMQQVENGLS--EKTLRKWLKMFKKRQLELYLPKFSIEGSYQLEKVLPSLGISNVFTS-HADLSGISN--  327 (395)
T ss_dssp             EEEEEECT-TCHHHHHHHCS--HHHHHHHHHHCEEEEEEEEEECEEEEEEEEGGGTGGGGTCCGGGST-TCCCTTTBS--
T ss_pred             EEEEEeCC-CCHHHHHHHhC--HHHHHHHHHhcceeEEEEEeeEEEEEEeecHHHHHHHcCCccccCC-CCCcccCcC--
Confidence            99999998 68999999997  3456666555566778999999999999999999999999999986 899999998  


Q ss_pred             CCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          316 VGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       316 ~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                       ..+++|++++|++.|+|||+|++|+|+|++.+..++.+ +.+.+|+|||||+|+|+|   +.|||+|+|.+|
T Consensus       328 -~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~~~~-~~~~~f~~drPFlf~I~~---~~iLF~G~v~~P  395 (395)
T 3b9f_I          328 -HSNIQVSEMVHKAVVEVDESGTRAAAATGTIFTFRSAR-LNSQRLVFNRPFLMFIVD---NNILFLGKVNRP  395 (395)
T ss_dssp             -CSSCCCSEEEEEEEEEECSCEEECCCSCSCSSBCCSCC-CCCEEEECCSCEEEEEES---SSEEEEEEESCC
T ss_pred             -CCCeeeeccceEEEEEEcCCCcccccccchhhhhccCC-CCCCEEEEeCCEEEEEEc---CCEEEEEEeCCC
Confidence             47899999999999999999999999998655444432 235789999999999998   799999999998


No 26 
>1jmo_A HC-II, heparin cofactor II, HLS2, serin; serpin, thrombin, protease, inhibition, inhibitor, blood CLO; HET: TYS NDG NAG; 2.20A {Homo sapiens} SCOP: e.1.1.1 PDB: 1jmj_A*
Probab=100.00  E-value=8.5e-82  Score=618.35  Aligned_cols=364  Identities=26%  Similarity=0.435  Sum_probs=327.6

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcC-CCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC---------hhHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTE-AKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS---------NDQLNAF   72 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~-~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~---------~~~~~~~   72 (391)
                      +..+..++++||++||+++. .. .+++|+||||+||+.+|+|+++||+|+|++||.++||++.         ..+++..
T Consensus       104 ~~~l~~~~~~Fa~~L~k~l~-~~~~~~~NivfSP~SI~~aLaml~~GA~G~T~~eL~~~L~~~~~~~~~~~~~~~~i~~~  182 (480)
T 1jmo_A          104 IQRLNILNAKFAFNLYRVLK-DQVNTFDNIFIAPVGISTAMGMISLGLKGETHEQVHSILHFKDFVNASSKYEITTIHNL  182 (480)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TTSCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTHHHHHHHCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hccCCCCCEEEcHHHHHHHHHHHHHhcCcHHHHHHHHHhCCCccccccccCCHHHHHHH
Confidence            45677889999999999997 33 6789999999999999999999999999999999999864         2678889


Q ss_pred             HHHHHHHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccc
Q 016311           73 ASELVAVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKE  152 (391)
Q Consensus        73 ~~~l~~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~  152 (391)
                      ++.+...+.+   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.+. .. ++.||+||+++|+|+|++
T Consensus       183 f~~ll~~l~~---~~~~~~L~~AN~lfv~~~~~l~~~F~~~~~~~y~a~~~~vDF~~~-~~-~~~IN~WV~~~T~gkI~~  257 (480)
T 1jmo_A          183 FRKLTHRLFR---RNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAEAQIADFSDP-AF-ISKTNNHIMKLTKGLIKD  257 (480)
T ss_dssp             HHHHHHHHHS---SCSSSEEEEEEEEEEETTSCCCHHHHHHHHHHHSCCEEEECTTCH-HH-HHHHHHHHHHHTTTSSCC
T ss_pred             HHHHHHHhhc---CCCCceEEEEEEEeecCCCcccHHHHHHHHHhhccceeeecccCH-HH-HHHHHHHHHHhhCCChhh
Confidence            9999888763   235678999999999999999999999999999999999999874 45 889999999999999999


Q ss_pred             cCCCCCCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCC
Q 016311          153 VLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGED  230 (391)
Q Consensus       153 ~l~~~~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~  230 (391)
                      ++  ++++++|+++|+||+||+|.|+.+|++..|..++|+..+|++++||||++.+.++|+..+  ++++|+|||+ +  
T Consensus       258 ll--~~l~~~T~lvLvNAiyFKg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~f~y~~~~~l~~~vleLPY~-~--  332 (480)
T 1jmo_A          258 AL--ENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGNFLAANDQELDCDILQLEYV-G--  332 (480)
T ss_dssp             TT--CSCCTTCCEEEEEEEEEECCBSSCCCGGGCEEEEEECSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEET-T--
T ss_pred             hh--cccCCCCeEEEEehHeeeccccCCCCCCCceeEEEEeCCCcEEEEEEEEEecceeeEEeCCCceEEEEEecC-C--
Confidence            99  589999999999999999999999999999999999999999999999999877776654  6999999999 5  


Q ss_pred             CceEEEEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcC
Q 016311          231 KRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAE  310 (391)
Q Consensus       231 ~~~~sm~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~  310 (391)
                        ++||+||||++..+|.+++++|+  ...+.+|....+...++|.||||++++++||+++|++|||+++|+. .||||+
T Consensus       333 --~~SM~IiLP~~~~~L~~le~~L~--~~~l~~~~~~l~~~~V~v~LPKFkie~~~dL~~~L~~LGi~~~F~~-~ADfsg  407 (480)
T 1jmo_A          333 --GISMLIVVPHKMSGMKTLEAQLT--PRVVERWQKSMTNRTREVLLPKFKLEKNYNLVESLKLMGIRMLFDK-NGNMAG  407 (480)
T ss_dssp             --TEEEEEEEESSGGGHHHHHHHCC--HHHHHHHHHHCEEEEEEEEEECEEEECCEECHHHHHHHTCCGGGST-TSCCTT
T ss_pred             --cEEEEEEecCCCCCHHHHHHhhC--HHHHHHHHhcccceEEEEEeccEEEEEeecHHHHHHhCCccccccC-CCCcCc
Confidence              69999999998889999999997  3456666555566778999999999999999999999999999975 899999


Q ss_pred             CCCCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          311 MVDSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       311 is~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      |++    .+++|++++|++.|+|||+|++|+|+|++.+..++.  +  .+|+|||||+|+|+|+.||.|||+|||.+|.+
T Consensus       408 is~----~~L~VS~v~HKa~IeVnEeGtEAAAaT~v~~~~~s~--~--~~F~aDrPFlF~I~d~~t~~iLF~G~v~~P~~  479 (480)
T 1jmo_A          408 ISD----QRIAIDLFKHQGTITVNEEGTQATTVTTVGFMPLST--Q--VRFTVDRPFLFLIYEHRTSCLLFMGRVANPSR  479 (480)
T ss_dssp             TCS----SCCCEEEEEEEEEEEECSCBSCCCCCCCCSEEECSC--C--CEEECCSCEEEEEEETTTTEEEEEEEESCTTC
T ss_pred             ccC----CCceecchheeEEEEccCCccccccccccccccccC--C--CcEEecCCEEEEEEECCCCcEEEEEEeCCCCC
Confidence            987    579999999999999999999999999865544443  2  28999999999999999999999999999975


No 27 
>2v95_A Corticosteroid-binding globulin; transport protein, CBG, RCL, serpin, secreted, transport, glycoprotein, lipid-binding, glucocorticoids; HET: HCY; 1.93A {Rattus norvegicus}
Probab=100.00  E-value=4.2e-82  Score=607.54  Aligned_cols=361  Identities=20%  Similarity=0.366  Sum_probs=301.7

Q ss_pred             chhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC----hhHHHHHHHHHH
Q 016311            2 DVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----NDQLNAFASELV   77 (391)
Q Consensus         2 ~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~----~~~~~~~~~~l~   77 (391)
                      +...+..++++||++||+++. ...+++|++|||+||+.+|+|+++||   |++||.++||++.    .++++..++.+.
T Consensus         5 ~~~~l~~~~~~Fa~~l~~~l~-~~~~~~N~v~SP~Si~~aLaml~~GA---T~~el~~~L~~~~~~~~~~~~~~~~~~l~   80 (371)
T 2v95_A            5 SHRGLAPTNVDFAFNLYQRLV-ALNPDKNTLISPVSISMALAMVSLGS---AQTQSLQSLGFNLTETSEAEIHQSFQYLN   80 (371)
T ss_dssp             GGGTTHHHHHHHHHHHHHHHH-HHCTTSCEEECHHHHHHHHHHHTTTC-----CHHHHHHTCCTTTSCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHh-ccCCCCcEEEchHHHHHHHHHHHHHH---HHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            345677899999999999997 45678999999999999999999999   9999999999974    257888999998


Q ss_pred             HHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCC
Q 016311           78 AVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPG  157 (391)
Q Consensus        78 ~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~  157 (391)
                      ..+.+   +..+..++++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  
T Consensus        81 ~~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~l~~--  154 (371)
T 2v95_A           81 YLLKQ---SDTGLEMNMGNAMFLLQKLKLKDSFLADVKQYYESEALAIDFED-WTKASQQINQHVKDKTQGKIEHVFS--  154 (371)
T ss_dssp             HHHTT---GGGSEEEEEEEEEEECTTCCBCHHHHHHHHHHSCCEEEECCCSS-HHHHHHHHHHHHHHHTTTCCCCSCC--
T ss_pred             HHHhC---CCCCcEEEEEEEEeEeCCCchhHHHHHHHHHHhCCceEEecCcc-HHHHHHHHHHHHHHHhcCchhhhcc--
Confidence            88753   23456899999999999999999999999999999999999985 7889999999999999999999995  


Q ss_pred             CCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCCCceEE
Q 016311          158 SVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFS  235 (391)
Q Consensus       158 ~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~~~~~s  235 (391)
                      +++++|+++|+||+||+|.|+.+|++..|.+++|+..+|+.++||||++.+.++|++.+  ++++++|||+++     .+
T Consensus       155 ~l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~vleLPy~~~-----~s  229 (371)
T 2v95_A          155 DLDSPASFILVNYIFLRGIWELPFSPENTREEDFYVNETSTVKVPMMVQSGSIGYFRDSVFPCQLIQMDYVGN-----GT  229 (371)
T ss_dssp             C--CCCSEEEEEEEEEEECBSSCCCGGGCEEEEEECSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSSS-----EE
T ss_pred             CCCCCceEEEEEHHhhhhhhhCcCCCcccceeEEEECCCeEEEEEEEEeeeeEeeEEeCCCCEEEEEEecCCC-----eE
Confidence            59999999999999999999999999999999999999999999999999877776544  799999999985     79


Q ss_pred             EEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCC
Q 016311          236 MYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSP  315 (391)
Q Consensus       236 m~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~  315 (391)
                      |+||||+++ +|.+++++|+  ...+..|.+..+...++|.||||++++++||+++|++||++++|+. .||||+|++  
T Consensus       230 m~iiLP~~~-~l~~le~~L~--~~~l~~~~~~l~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~--  303 (371)
T 2v95_A          230 AFFILPDQG-QMDTVIAALS--RDTIDRWGKLMTPRQVNLYIPKFSMSDTYDLKDVLEDLNIKDLLTN-QSDFSGNTK--  303 (371)
T ss_dssp             EEEEEECTT-CHHHHHHHCS--HHHHHHHHHHCEEEEEEEEEECEEEEEEEEGGGTSCSCCHHHHBCC------------
T ss_pred             EEEEecCCC-CHHHHHHHhC--HHHHHHHHHhhhcccceEeeeEEEeecccchHHHHHhcCCccccCC-CCCcCCCCC--
Confidence            999999987 7999999997  3455555555556678999999999999999999999999999985 899999998  


Q ss_pred             CCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCC
Q 016311          316 VGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL  389 (391)
Q Consensus       316 ~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~  389 (391)
                       +.+++|+ ++|++.|+|||+|++|+|+|++.+..++.    +.+|+|||||+|+|+|+.||.|||+|||.+|.
T Consensus       304 -~~~l~vs-v~hka~ieVnE~GteAaAaT~~~~~~~~~----~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~  371 (371)
T 2v95_A          304 -DVPLTLT-MVHKAMLQLDEGNVLPNSTNGAPLHLRSE----PLDIKFNKPFILLLFDKFTWSSLMMSQVVNPA  371 (371)
T ss_dssp             ----CCEE-EEEEEEEEESCCCCC----------CCCC----CEEEECCSCEEEEEEETTTCCEEEEEEESCCC
T ss_pred             -CCCeeEE-EEEEEEEEecCCcccccccccccccccCC----CcEEEeeCCEEEEEEECCCCcEEEEEEecCCC
Confidence             4689999 99999999999999999999865544332    46899999999999999999999999999995


No 28 
>2pef_A Serine protease inhibitor; serpin; 1.60A {Thermoanaerobacter tengcongensis} PDB: 2vh4_A 2pee_A
Probab=100.00  E-value=1.6e-82  Score=611.33  Aligned_cols=364  Identities=23%  Similarity=0.431  Sum_probs=323.9

Q ss_pred             hhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh-hHHHHHHHHHHHHHhhC
Q 016311            5 ESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN-DQLNAFASELVAVVFAD   83 (391)
Q Consensus         5 ~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~-~~~~~~~~~l~~~l~~~   83 (391)
                      .+..++++||++||+++.   .+++|++|||+||+.+|+|+++||+|+|++||.++||++.. ++++..++.+...+.. 
T Consensus         8 ~~~~~~~~Fa~~L~~~l~---~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~l~~~l~~-   83 (373)
T 2pef_A            8 KFIYNTADFSIELFKNSI---DDKENSLISPLSAMLALAMTANGADNETLAQMEKALGKDISIEDLNKYLYTYMKKLPN-   83 (373)
T ss_dssp             HHHHHHHHHHHHHHHTSC---CSSSCCEECHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSCC-
T ss_pred             HHHHHHHHHHHHHHHHhh---CCCCCEEEccHHHHHHHHHHHhhccChHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhc-
Confidence            456789999999999995   46889999999999999999999999999999999998643 7888889998877642 


Q ss_pred             CCCCCCCeeeeeeeeeec-CCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCc
Q 016311           84 GSPSGGPRLSVANGVWID-ESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNS  162 (391)
Q Consensus        84 ~~~~~~~~l~~~n~i~~~-~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~  162 (391)
                         ..+..++++|+||++ +++.+.++|++.++++|+++++.+||.   +.+++.||+||+++|+|+|+++++  +++++
T Consensus        84 ---~~~~~l~~an~l~~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~---~~a~~~IN~WV~~~T~gkI~~ll~--~l~~~  155 (373)
T 2pef_A           84 ---EEKSKLTIANSIWFKENDFMPSKDFLQIIADYYKADIFKAAFD---SSTVSDINNWVKSKTNGMIDKILN--KIDPE  155 (373)
T ss_dssp             ---BTTEEEEEEEEEEEETTTEEECHHHHHHHHHHHCCEEEEECCS---HHHHHHHHHHHHHHTTTSCCCSCS--CCCTT
T ss_pred             ---CCCcEEEEEEEEEEecCCCchhHHHHHHHHHHhCCeeEecCch---HHHHHHHHHHHHHhccCchhhhhc--cCCCC
Confidence               345789999999999 799999999999999999999999997   378899999999999999999995  79999


Q ss_pred             CeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccCCeEEEEeecCCCCCCceEEEEEEecC
Q 016311          163 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPD  242 (391)
Q Consensus       163 t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~~~vveLp~~~~~~~~~~sm~iilP~  242 (391)
                      |+++|+||+||+|.|+.+|++..|..++|+..+|++++||||++.+.+ |.++.++++++|||+++    ++||+||||+
T Consensus       156 t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~-y~~~~~~~vleLPy~~~----~~sm~iiLP~  230 (373)
T 2pef_A          156 DVMYLINAVAFDAEWETVYEKASVHEDIFTDVYGNRQKVEFMNSEENL-YIEEENAVGFVKPYAKN----HYSFVAILPD  230 (373)
T ss_dssp             CCEEEEEEEEEEEEBSSCCCGGGEEEEEEECTTSCEEEEEEEEEEEEE-EEEETTEEEEEEEBGGG----SEEEEEEEEC
T ss_pred             ceEEEEEeeeeeccccccCChhhccccceecCCCeEEEechhhccCeE-EeecCCeEEEEEecCCC----cEEEEEEECC
Confidence            999999999999999999999999999999999999999999999877 77788999999999987    7999999999


Q ss_pred             CCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCCCeeE
Q 016311          243 AKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGKNLYV  322 (391)
Q Consensus       243 ~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~~l~v  322 (391)
                      ++.+|.+++++|+  ...+.++++..+...++|.||||++++++||+++|++||++++|++..|||++|++.+ +.+++|
T Consensus       231 ~~~~L~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfs~is~~~-~~~l~v  307 (373)
T 2pef_A          231 ENISVNEYIKTLT--GQKFIDLIKNAKITLVRASLPKFKYEYTIKMNETLESLGMTDAFLPDKADFSKLGKSD-IGNLYI  307 (373)
T ss_dssp             TTSCHHHHHHHCC--HHHHHHHHHTCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTEEET-TSCCCC
T ss_pred             CCCCHHHHHhhhh--hhHHHHHHhhceeeEEEEECceEEeecccchHHHHHhcCCccccCCCcCchhhcccCC-CCCeEE
Confidence            9999999999997  3456666666666778999999999999999999999999999996589999998731 137999


Q ss_pred             eeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCC
Q 016311          323 SSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL  389 (391)
Q Consensus       323 ~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~  389 (391)
                      ++++|++.|+|||+|++|+|+|++.+..++.+ +.+.+|+|||||+|+|+|+.||.|||+|+|.+|.
T Consensus       308 s~v~hka~ieVnE~GteAaAaT~~~~~~~~~~-~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~p~  373 (373)
T 2pef_A          308 SEVLHKTFISVDELGTKAGAVTSVDITAAGIP-VNFKTVKLNRPFIFAIIDNSTNLPIFIGTVLSLK  373 (373)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEEEESCC--------CCSEEEEEEEEEEEEETTTTEEEEEEEEEEEC
T ss_pred             cchhheeEEEECCCccccccccchhhccccCC-CCCCeEEecCCEEEEEEECCCCcEEEEEEecCCC
Confidence            99999999999999999999998655555442 2356899999999999999999999999999983


No 29 
>2wxy_C Angiotensinogen, serpin A8; glycoprotein, hypertension, vasoconstrictor, renin, serpins, vasoactive, hormone; 2.10A {Mus musculus} PDB: 2wxx_A 2wy0_C 2wxz_A 2wxz_C 2wy1_A
Probab=100.00  E-value=1.2e-80  Score=609.87  Aligned_cols=365  Identities=19%  Similarity=0.250  Sum_probs=314.8

Q ss_pred             hhhhhhhhHHHHHHHHHhhhcCCCCCcE-EEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----------hHHHHH
Q 016311            4 RESISNQTDVALSLTKHVALTEAKDSNL-VFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----------DQLNAF   72 (391)
Q Consensus         4 ~~~~~~~~~fa~~L~~~l~~~~~~~~N~-v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----------~~~~~~   72 (391)
                      ..+..++++||++||+++. ...+++|+ +|||+||+.+|+|+++||+|+|++||.++||++..          .+++..
T Consensus        71 ~~l~~~~~~Fa~~L~~~l~-~~~~~~Ni~v~SP~SI~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~  149 (453)
T 2wxy_C           71 AQVAMITNFVGFRMYKMLN-EAGSGASGAILSPPALFGTLVSFYLGSLDPTASQLQTLLDVPVKEGDCTSRLDGHKVLAA  149 (453)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHCCCSSEEEECHHHHHHHHHHHHHTCCTTHHHHHHHHTTCCCCTTCGGGSBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCCCCcEEEECHHHHHHHHHHHHhhcccHHHHHHHHHhCCCcccccccccccHHHHHHH
Confidence            3467789999999999998 45678999 99999999999999999999999999999999753          356777


Q ss_pred             HHHHHHHHhhCC--CCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCe-eEEecCCCChHHHHHHHHHHHHHHhCCc
Q 016311           73 ASELVAVVFADG--SPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAA-SNQVDFQTKAAEVSREVNMWAEKETNGL  149 (391)
Q Consensus        73 ~~~l~~~l~~~~--~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~-~~~~df~~~~~~a~~~iN~wv~~~T~g~  149 (391)
                      ++.+...+....  .+..+..++++|+||+++++.+.++|++.++++|++. ++.+||..+++.+++.||+||+++|+|+
T Consensus       150 ~~~l~~~l~~~~~~~~~~~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~~vdF~~~~~~a~~~IN~WV~~~T~gk  229 (453)
T 2wxy_C          150 LRAVQGLLVTQGGSSSQTPLLQSIVVGLFTAPGFRLKHSFVQSLALFTPALFPRSLDLSTDPVLATEKINRFIKAVTGWK  229 (453)
T ss_dssp             HHHHHHHHHC--------CEEEEEEEEEEECTTCCEEHHHHHHHHTTCSCEEEEECCCSSCHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHhhccccCCCCccEEEEEEeEeEeCCCCccHHHHHHHHHHcCCCceeeecccCCHHHHHHHHHHHHHHhcCCc
Confidence            888877775311  1123457999999999999999999999999999996 9999995457899999999999999999


Q ss_pred             ccccCCCCCCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecCC
Q 016311          150 VKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYKQ  227 (391)
Q Consensus       150 i~~~l~~~~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~~  227 (391)
                      |+++++  +++++|+++|+||+||+|.|+.+|++..  .++|+..+|++++||||++++.++|+..  .++++++|||++
T Consensus       230 I~~ll~--~l~~~t~lvLvNaiyFKg~W~~~F~~~~--~~~F~~~~~~~v~V~mM~~~~~f~y~~~~~l~~~vleLPY~~  305 (453)
T 2wxy_C          230 MNLPLE--GVSTDSTLLFNTYVHFQGTMRGFSQLPG--VHEFWVDNSISVSVPMISGTGNFQHWSDAQNNFSVTCVPLGE  305 (453)
T ss_dssp             CCCCCC--CCCTTCCEEEEEEEEEEEEEEEEEECSS--CEEEEEETTEEEEECEEEEEEEEEEEEETTTTEEEEEEESSS
T ss_pred             hhhhhc--ccCCCCeEEEEehheeeccCCCCCCCcc--CCCcEeCCCeEEEEEEEEEeCCCCEEEecCCCcEEEEEECCC
Confidence            999995  5999999999999999999999999988  8999999999999999999987777664  489999999975


Q ss_pred             CCCCceEEEEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCC
Q 016311          228 GEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGG  307 (391)
Q Consensus       228 ~~~~~~~sm~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~ad  307 (391)
                           ++||+||||+++.+|.+++++|+.  ..+..|++..+...++|.||||++++++||+++|++|||+++|+. .||
T Consensus       306 -----~~sm~iiLP~~~~~L~~le~~L~~--~~l~~~~~~l~~~~V~v~LPKFkie~~~dL~~~L~~lGi~~~F~~-~Ad  377 (453)
T 2wxy_C          306 -----RATLLLIQPHCISDLDRVEALIFQ--NDLLTWIENPPPRAIRLTLPQLEIRGSYNLQDLLAEDKLPTLLGA-EAN  377 (453)
T ss_dssp             -----SEEEEEEEESSGGGHHHHHHHHTC---CCCTTCCCCCCEEEEEEEECEEEEEEEEHHHHHHHTTCTTTTST-TCC
T ss_pred             -----CEEEEEEecCCCCCHHHHHHHhCH--HHHHHHHHhccccccEEecceEEEeccccHHHHHHhcChhhhhcc-cCC
Confidence                 599999999998899999999984  346666666666778999999999999999999999999999986 899


Q ss_pred             CcCCCCCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecC
Q 016311          308 LAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLN  387 (391)
Q Consensus       308 fs~is~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~  387 (391)
                      ||||++    .+++|++++|++.|+|||+|++|+|+|++..   +  .+.+..|+|||||+|+|+|+.||.|||+|||.+
T Consensus       378 fsgis~----~~l~Vs~v~hka~ieVnEeGteAaAaT~~~~---~--~~~~~~f~~drPFlF~I~d~~t~~iLF~G~v~~  448 (453)
T 2wxy_C          378 LNNIGD----TNPRVGEVLNSILLELKAGEEEQPTTSVQQP---G--SPEALDVTLSSPFLFAIYEQDSGTLHFLGRVNN  448 (453)
T ss_dssp             CTTTBS----SCCCBCCCEEEEEEEEEEEECCCC---------------CCEEEECCSCEEEEEEETTTCCEEEEEEESC
T ss_pred             cccccC----CCceeeEEEEEEEEEecCCCccccccccccc---c--CCCCceEEeeCCEEEEEEECCCCcEEEEEEeCC
Confidence            999998    3499999999999999999999999997421   1  223578999999999999999999999999999


Q ss_pred             CCC
Q 016311          388 PLA  390 (391)
Q Consensus       388 P~~  390 (391)
                      |..
T Consensus       449 P~~  451 (453)
T 2wxy_C          449 PQS  451 (453)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            975


No 30 
>1imv_A PEDF, pigment epithelium-derived factor; serpin, angiogenesis, signaling protein; HET: NAG; 2.85A {Homo sapiens} SCOP: e.1.1.1
Probab=100.00  E-value=3e-81  Score=606.14  Aligned_cols=360  Identities=22%  Similarity=0.360  Sum_probs=316.3

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh--hHHHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN--DQLNAFASELVAVV   80 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~--~~~~~~~~~l~~~l   80 (391)
                      +..+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..  .+++..++.+...+
T Consensus        31 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~l~~~l  109 (398)
T 1imv_A           31 VNKLAAAVSNFGYDLYRVRS-SMSPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDLISSPDIHGTYKELLDTV  109 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTGGGCCCSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-ccCCCCCEEEChHHHHHHHHHHHHhcccHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHh
Confidence            45677899999999999998 4567889999999999999999999999999999999999743  47888899988877


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      ..     .+..+.++|+||+++++.+.++|++.++++|+++++.+| .+ ++.+++.||+||+++|+|+|+++++  +++
T Consensus       110 ~~-----~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vd-~~-~~~a~~~IN~WV~~~T~gkI~~ll~--~l~  180 (398)
T 1imv_A          110 TA-----PQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLT-GN-PRLDLQEINNWVQAQMKGKLARSTK--EIP  180 (398)
T ss_dssp             TS-----TTSCEEEEEEEEECTTCCCCHHHHHHHHHHHCCCCEECC-SC-HHHHHHHHHHHHHHHTTTCSCCCCS--CCC
T ss_pred             hC-----CCCCeEEEEEEeecCCCcHHHHHHHHHHHHhCCcceecC-CC-HHHHHHHHHHHHHHhhcCchhhhhh--ccC
Confidence            42     234578999999999999999999999999999999999 64 7889999999999999999999995  699


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccc-ccccccc--cCCeEEEEeecCCCCCCceEEEE
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSK-KNQFVSA--FDGFKVLGLPYKQGEDKRRFSMY  237 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~-~~~~~~~--~~~~~vveLp~~~~~~~~~~sm~  237 (391)
                      ++|+++|+||+||+|.|+.+|++..|..++|+..+|++++||||++. +.++|+.  ..++++|+|||+++     ++|+
T Consensus       181 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~f~~~~~~~l~~~vleLPY~~~-----~sm~  255 (398)
T 1imv_A          181 DEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTGS-----MSII  255 (398)
T ss_dssp             SSCSEEEEEEEEEECCEEECCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTT-----EEEE
T ss_pred             CCceEEEEEhhhhhhhhcCcCChhhCeeeEEEeCCCEEEEEEEEEEecceeEEEEecCCCeEEEEEccCCC-----eEEE
Confidence            99999999999999999999999999999999999999999999999 8777665  44899999999874     9999


Q ss_pred             EEec--CCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCC
Q 016311          238 FFLP--DAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSP  315 (391)
Q Consensus       238 iilP--~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~  315 (391)
                      ||||  ++ .+|.+++++|+  ...+.+|.+..+...++|.||||++++++||+++|++|||+++| . .||||+|++  
T Consensus       256 iiLP~~~~-~~L~~le~~L~--~~~l~~~~~~~~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F-~-~Adfsgis~--  328 (398)
T 1imv_A          256 FFLPLKVT-QNLTLIEESLT--SEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKLQSLF-D-SPDFSKITG--  328 (398)
T ss_dssp             EEEESSCC-SCCHHHHTTCC--HHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHTTTTTHHH-H-SCCCTTTCS--
T ss_pred             EEEeCCCC-CCHHHHHHHhC--HHHHHHHHHhcceeEEEEEeeeEEEEeEEchhHhhhhcChhhcc-c-ccCCCCCcC--
Confidence            9999  66 68999999997  34566666555667789999999999999999999999999999 5 799999987  


Q ss_pred             CCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          316 VGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       316 ~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                        .+++|++++|++.|+|||+|++|+|+|++.+...    ..+.+|+|||||+|+|+|+.||.|||+|+|.+|..
T Consensus       329 --~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~----~~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~  397 (398)
T 1imv_A          329 --KPIKLTQVEHRAGFEWNEDGAGTTPSPGLQPAHL----TFPLDYHLNQPFIFVLRDTDTGALLFIGKILDPRG  397 (398)
T ss_dssp             --SCCCEEEEEEEEEEEECSCEEECC--------CC----CCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTC
T ss_pred             --CCEEEEEEEEEEEEEecCCccccccccccccccC----CCCceEEccCCEEEEEEECCCCeEEEEEEeCCCCC
Confidence              5799999999999999999999999998544321    22468999999999999999999999999999975


No 31 
>1sng_A COG4826: serine protease inhibitor; serine protease inhibitor (serpin), native state., hydrolase inhibitor; 1.76A {Thermobifida fusca} SCOP: e.1.1.1
Probab=100.00  E-value=1.2e-80  Score=596.85  Aligned_cols=358  Identities=23%  Similarity=0.431  Sum_probs=306.1

Q ss_pred             CchhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHH
Q 016311            1 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVV   80 (391)
Q Consensus         1 ~~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l   80 (391)
                      |+...+..++++||++||+++. ...+++|++|||+||+.+|+|+++||+|+|++||.++||    ++++..++.+ ..+
T Consensus         5 ~~~~~l~~~~~~Fa~~l~~~l~-~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~----~~~~~~~~~l-~~l   78 (370)
T 1sng_A            5 MSGGFLRDDHLEFALHLHRRLA-EAVPDGEVIWSPYSVAXALGVLAAGARATTRTELTTLLG----TDPAPLLAAL-DRA   78 (370)
T ss_dssp             SSCCCCCHHHHHHHHHHHHHHH-HTSTTCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHT----SCHHHHHHHH-HHT
T ss_pred             ccHHHHHHHHHHHHHHHHHHHH-hcCCCCCEEEccHHHHHHHHHHHhhccchHHHHHHHHHH----HHHHHHHHHH-HHH
Confidence            4556677899999999999998 456789999999999999999999999999999999999    4677788888 555


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      .     ..+..++++|+||+++++.+.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++++++++
T Consensus        79 ~-----~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~~~T~g~I~~l~~~~~l~  153 (370)
T 1sng_A           79 V-----TDSPDLASRTVLWVSADVPVRSSFRATMHDRPDSDVRTADFRTNPEGVRATVNADIADATRGMIRELLPQGAVT  153 (370)
T ss_dssp             T-----TTCTTEEEEEEEEEETTSCCCHHHHHHHHTSTTEEEEEECTTTCHHHHHHHHHHHHHHHTTTSSCCSSCTTSCC
T ss_pred             h-----CCCceEEEeeeeeeeCCCcccHHHHHHHHhhhCCeEEEecCcCCHHHHHHHHHHHHHHHhcCchhhccCccccC
Confidence            3     34568999999999999999999999999999999999999866889999999999999999999999988999


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCCCceEEEEE
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFSMYF  238 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~~~~~sm~i  238 (391)
                      ++|.++|+||+||+|.|+.+|++..|..++|+ .+|++++||||++.+.++|++.+  ++++|+|   ++    ++||+|
T Consensus       154 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~-~~~~~~~V~mM~~~~~~~y~~~~~~~~~vleL---~~----~~sm~i  225 (370)
T 1sng_A          154 PDLRAILTNALWAKARWTTPFEAHLTRAGTFR-TPRGPKRVPFMHRTKTMPYATARGWRMVTLHA---HD----ELAVDV  225 (370)
T ss_dssp             TTCCEEEEEEEEEECCBSSCCCGGGCEEEEEE-ETTEEEEEEEEEEEEEEEEEEETTEEEEEEEB---ST----TCEEEE
T ss_pred             CcccEEEEEEEEEccccccCCCcccCeeeeEe-cCCeEEEeEEEEEeeeeeeEEeCCCCEEEEEE---CC----CEEEEE
Confidence            99999999999999999999999999999999 99999999999999888887766  5678999   44    699999


Q ss_pred             EecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCC
Q 016311          239 FLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGK  318 (391)
Q Consensus       239 ilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~  318 (391)
                      |||+  .+|.++++  +  ...+.+|....+...++|.||||++++++||++.|++||++++|+. .|||++|++   ..
T Consensus       226 iLP~--~~L~~l~~--~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~---~~  295 (370)
T 1sng_A          226 LLPP--GTNAAAVP--T--APLLTALHRRSASTSVELALPRFELTQPHQLVEVLAEAGVRTLFTA-SADLSGIST---VP  295 (370)
T ss_dssp             EECC--GGGTTCCC--C--HHHHHHHHHTCEEEEEEEEEECEEEEEEEECHHHHHHHTCCGGGST-TCCCTTTCS---SC
T ss_pred             EecC--CCHHHHhh--C--HHHHHHHHHhCcceeEEEEcceEEEecccchHHHHHhcCcchhcCC-ccCcccCCC---CC
Confidence            9999  67887766  2  4556666666666778999999999999999999999999999995 899999988   35


Q ss_pred             CeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhcc-CCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          319 NLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIV-LSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       319 ~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~-~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                       ++|++++|++.|+|||+|++|+|+|++.+..++.+ .+.+.+|+|||||+|+|+|+  |.|||+|||.+|.+
T Consensus       296 -l~vs~v~hka~ieV~E~GteAaAaT~~~~~~~~~~~~~~~~~f~~drPFlf~I~~~--~~iLF~G~v~~P~~  365 (370)
T 1sng_A          296 -LYVDTVIHQARLRVDERGAEGAAATAAMMLLAGAMPPRRTIRFSVDRPFHIVVRRR--GAILFLGSIADPHD  365 (370)
T ss_dssp             -CCCCEEEEEEEEEECSCC--------------------CCEEEECCSCEEEEEEET--TEEEEEEEESSCCC
T ss_pred             -eEEEEEEEEEEEEEcCCCcccccccchhhccccccCCCCCCEEEeeCCEEEEEEEC--CEEEEEEEcCCCCC
Confidence             99999999999999999999999998655555543 12357899999999999998  89999999999975


No 32 
>2wxw_A Angiotensinogen, serpin A8; glycoprotein, hypertension, vasoconstrictor, renin, serpins, vasoactive, hormone; 3.30A {Homo sapiens} PDB: 2x0b_B
Probab=100.00  E-value=5.1e-80  Score=605.44  Aligned_cols=363  Identities=15%  Similarity=0.195  Sum_probs=312.4

Q ss_pred             hhhhhhhhHHHHHHHHHhhhcCCCCCcE--EEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----------hHHHH
Q 016311            4 RESISNQTDVALSLTKHVALTEAKDSNL--VFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----------DQLNA   71 (391)
Q Consensus         4 ~~~~~~~~~fa~~L~~~l~~~~~~~~N~--v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----------~~~~~   71 (391)
                      ..+..++++||++||+++. ...+++|+  ||||+||+.+|+|+++||+|+|++||.++||++..          .+++.
T Consensus        72 ~~l~~~~~~Fa~~L~k~l~-~~~~~~Nin~v~SP~SI~~aLaml~~GA~G~T~~el~~~L~~~~~~~~~~~~~~~~~~~~  150 (453)
T 2wxw_A           72 AMVGMLANFLGFRIYGMHS-ELWGVVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLDAHKVLS  150 (453)
T ss_dssp             HHHHHHHHHHHHHHGGGCS-CTTTSCSBSSEECHHHHHHHHHHHHHSCCTTHHHHHHHHHTCCCCTTCTTTSBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCCCCCcCEEECHHHHHHHHHHHHhhcccHHHHHHHHHhCCCCccccccccccHHHHHH
Confidence            3467789999999999997 44577899  99999999999999999999999999999999753          35777


Q ss_pred             HHHHHHHHHhhCC--CCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCe-eEEecCCCChHHHHHHHHHHHHHHhCC
Q 016311           72 FASELVAVVFADG--SPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAA-SNQVDFQTKAAEVSREVNMWAEKETNG  148 (391)
Q Consensus        72 ~~~~l~~~l~~~~--~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~-~~~~df~~~~~~a~~~iN~wv~~~T~g  148 (391)
                      .++.+...+....  .+.....++++|+||+++++.+.++|++.++++|++. ++.+||.+ ++.+++.||+||+++|+|
T Consensus       151 ~~~~l~~~l~~~~~~~~~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~~vdF~~-~~~a~~~IN~WV~~~T~g  229 (453)
T 2wxw_A          151 ALQAVQGLLVAQGRADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLPRSLDFTE-LDVAAEKIDRFMQAVTGW  229 (453)
T ss_dssp             HHHHHHHHHSCCTTTCSCCCEEEEEEEEEECCTTCCEEHHHHHHHHHHCSCEEECBCCTTS-HHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHhhcccccCCCccEEEEEEeEeEECCCccCHHHHHHHHHHhCccceeeeCCCC-HHHHHHHHHHHHHHHhcC
Confidence            7888887775311  1223457999999999999999999999999999995 99999964 788999999999999999


Q ss_pred             cccccCCCCCCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--CeEEEEeecC
Q 016311          149 LVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYK  226 (391)
Q Consensus       149 ~i~~~l~~~~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~  226 (391)
                      +|+++++  +++++|.++|+||+||+|.|+.+|++..  .++|+..+|++++||||++.+.++|+..+  ++++++|||+
T Consensus       230 kI~~ll~--~l~~~t~lvLvNaiyFKg~W~~~F~~~~--~~~F~~~~~~~v~V~mM~~~~~f~y~~~~~l~~~vleLPY~  305 (453)
T 2wxw_A          230 KTGCSLM--GASVDSTLAFNTYVHFQGKMKGFSLLAE--PQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFT  305 (453)
T ss_dssp             CCSCSST--TCCSSCCCEEEEEEEEEEEETTEEECSS--CCCBCSSSSCCBCCCCEEEEEEEEEECCTTTTEEEEECCBT
T ss_pred             chhhhhc--CcCCCCeEEEEehhEEeccCCCCCCccc--CCCcEeCCCEEEEEEEEEEecccceEEecCCCeEEEEEecC
Confidence            9999996  5999999999999999999999999988  89999999999999999999877777644  8999999997


Q ss_pred             CCCCCceEEEEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCC
Q 016311          227 QGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGG  306 (391)
Q Consensus       227 ~~~~~~~~sm~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~a  306 (391)
                      +     ++||+||||+++.+|.+++++|+.  ..+..|.+..+...++|.||||++++++||+++|++|||+++|+. .|
T Consensus       306 ~-----~~sm~iiLP~~~~~L~~le~~L~~--~~l~~~~~~l~~~~V~v~LPKFkie~~~dL~~~L~~lGi~~~F~~-~A  377 (453)
T 2wxw_A          306 E-----SACLLLIQPHYASDLDKVEGLTFQ--QNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHT-EL  377 (453)
T ss_dssp             T-----TEEEEEEEESSCSCHHHHHHTTSC--TTHHHHCCCCCEEEEEEEECCCEEEEEEEHHHHSCTTSCHHHHHS-SS
T ss_pred             C-----cEEEEEEeCCCCCCHHHHHHHhCH--HHHHHHHHhcccccceEecceEEecccccHHHHHHhcCchhhcCC-CC
Confidence            5     499999999999899999999984  346667766667788999999999999999999999999999985 89


Q ss_pred             CCcCCCCCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEec
Q 016311          307 GLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVL  386 (391)
Q Consensus       307 dfs~is~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~  386 (391)
                      |||+|++    .+++|++++|++.|+|||+|++|+|+|...    .  .+.+.+|++||||+|+|+|+.||.|||+|||.
T Consensus       378 dfsgis~----~~l~Vs~v~hka~ieVnEeGteAaAat~~~----~--~~~~~~f~~drPFlF~I~~~~t~~iLF~G~v~  447 (453)
T 2wxw_A          378 NLQKLSN----DRIRVGEVLNSIFFELEADEREPTESTQQL----N--KPEVLEVTLNRPFLFAVYDQSATALHFLGRVA  447 (453)
T ss_dssp             CCCSSCS----SCCCCSCCEEEEEEEEEECC------------------CCCEEEECCSCEEEEEEETTTTEECCEEEES
T ss_pred             CCCcccC----CCceEeEEEEEEEEEecCCCcccccccccc----c--CCCCCeEEEeCCEEEEEEECCCCcEEEEEEeC
Confidence            9999988    349999999999999999999999888631    1  12357899999999999999999999999999


Q ss_pred             CCCC
Q 016311          387 NPLA  390 (391)
Q Consensus       387 ~P~~  390 (391)
                      +|..
T Consensus       448 ~P~~  451 (453)
T 2wxw_A          448 NPLS  451 (453)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            9975


No 33 
>2r9y_A Alpha-2-antiplasmin; inhibitory serpin, plasmin inhibitor, AC phase, glycoprotein, protease inhibitor, secreted, serine P inhibitor, sulfation; 2.65A {Mus musculus}
Probab=100.00  E-value=1.2e-78  Score=590.19  Aligned_cols=357  Identities=26%  Similarity=0.409  Sum_probs=307.2

Q ss_pred             chhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHHh
Q 016311            2 DVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVVF   81 (391)
Q Consensus         2 ~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l~   81 (391)
                      ++..+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++...+++..++.+...+ 
T Consensus        17 ~~~~l~~~~~~Fa~~L~k~l~-~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~eL~~~L~~~~~~~~~~~~~~l~~~~-   94 (430)
T 2r9y_A           17 ETRRLAQAMMAFTTDLFSLVA-QTSTSSNLVLSPLSVALALSHLALGAQNQTLHSLHRVLHMNTGSCLPHLLSHFYQNL-   94 (430)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHCCSSSEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTCCTTSCHHHHHHHHHHTS-
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcCCCCCEEECHHHHHHHHHHHHhhcCcHHHHHHHHHhCCCcHHHHHHHHHHHHhhc-
Confidence            356677899999999999997 456789999999999999999999999999999999999986656666666665332 


Q ss_pred             hCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCC
Q 016311           82 ADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDN  161 (391)
Q Consensus        82 ~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~  161 (391)
                            .+..++++|+||+++++.+.++|++.++++|++++..+||.  ++.+++.||+||+++|+|+|+++++  ++++
T Consensus        95 ------~~~~L~~An~l~~~~~~~l~~~F~~~~~~~y~a~~~~~d~~--~~~a~~~IN~WV~~~T~gkI~~ll~--~l~~  164 (430)
T 2r9y_A           95 ------GPGTIRLAARIYLQKGFPIKDDFLEQSERLFGAKPVKLTGK--QEEDLANINQWVKEATEGKIEDFLS--ELPD  164 (430)
T ss_dssp             ------CSSSEEEEEEEEECTTCCCCHHHHHHHHHHHSSCCEECCSC--HHHHHHHHHHHHHHHTTTSCCCCCC--CCCS
T ss_pred             ------cCceEEeeehhhhhCCCcccHHHHHHHHHHhCCceeecCCC--cHHHHHHHHHHHHHhcCCCccchhh--ccCc
Confidence                  34679999999999999999999999999999999988864  5788999999999999999999995  6999


Q ss_pred             cCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccc-cccc--cccCCeEEEEeecCCCCCCceEEEEE
Q 016311          162 STRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK-NQFV--SAFDGFKVLGLPYKQGEDKRRFSMYF  238 (391)
Q Consensus       162 ~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~-~~~~--~~~~~~~vveLp~~~~~~~~~~sm~i  238 (391)
                      +|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+ .++|  .+..++++|+|||++     ++||+|
T Consensus       165 ~T~lvLvNAiyFKg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~~~~~~~~~l~~~vleLPY~~-----~~SM~i  239 (430)
T 2r9y_A          165 STVLLLLNAIHFHGFWRTKFDPSLTQKDFFHLDERFTVSVDMMHAVSYPLRWFLLEQPEIQVAHFPFKN-----NMSFVV  239 (430)
T ss_dssp             SCSEEEEEEEEEECCEEECCCGGGCEEEEEESSSSEEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSS-----SEEEEE
T ss_pred             ccceeEeeeeEEecccCCCCCCCCcccceEEecCCeEEEEEeeeecccceeEEEecCCcEEEEEeecCC-----CEEEEE
Confidence            99999999999999999999999999999999999999999999875 3444  346699999999986     499999


Q ss_pred             EecCCC-CChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCC
Q 016311          239 FLPDAK-DGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVG  317 (391)
Q Consensus       239 ilP~~~-~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~  317 (391)
                      |||++. .+|.+++++|+  ...+..+  ..+...++|.||||++++++||+++|++|||+++|+.  ||||+|++    
T Consensus       240 iLP~~~~~~L~~le~~L~--~~~l~~~--~~~~~~v~v~LPKFkie~~~dL~~~L~~lGi~~~F~~--Adfsgis~----  309 (430)
T 2r9y_A          240 VMPTYFEWNVSEVLANLT--WDTLYHP--SLQERPTKVWLPKLHLQQQLDLVATLSQLGLQELFQG--PDLRGISE----  309 (430)
T ss_dssp             EEESSSCCCHHHHHTTCC--HHHHSCC--CSCCEEEEEEEECEEEEEEEECHHHHHHHTTGGGGTC--CCCTTTCS----
T ss_pred             EecCCCCCCHHHHHHhcC--HHHHHHh--cccCceEEEEeccEEEEeeecHHHHHHhcCccccccc--ccccccCC----
Confidence            999885 58999999997  3344443  2234567999999999999999999999999999974  99999987    


Q ss_pred             CCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          318 KNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       318 ~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      .+++|++++|++.|+|||+|++|+|+|++.+. ++.    ...|+|||||+|+|+|+.||.|||+|+|.+|..
T Consensus       310 ~~l~Vs~v~Hka~ieVnEeGteAAAaT~~~~~-~~s----~~~f~adrPFlF~I~d~~t~~iLF~G~v~~P~~  377 (430)
T 2r9y_A          310 QNLVVSSVQHQSTMELSEAGVEAAAATSVAMN-RMS----LSSFTVNRPFLFFIMEDTIGVPLFVGSVRNPNP  377 (430)
T ss_dssp             SCCCEEEEEEEEEEEECSCEEECC----------CC----CEEEECCSCEEEEEEETTTCCEEEEEEESCSCT
T ss_pred             CCeEeeccceEEEEEecCCCcccccccccccc-ccC----CceEEecCCEEEEEEECCCCcEEEEEEecCCCc
Confidence            47999999999999999999999999985443 221    247999999999999999999999999999974


No 34 
>2oay_A C1-inhibitor, plasma protease C1 inhibitor, C1 INH, C1INH; latent serpin, RCL insertion, immune system,hydrolase inhibi; HET: NAG; 2.35A {Homo sapiens}
Probab=100.00  E-value=5.5e-77  Score=575.26  Aligned_cols=352  Identities=24%  Similarity=0.388  Sum_probs=298.5

Q ss_pred             hhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh-hHHHHHHHHHHHHHhh
Q 016311            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN-DQLNAFASELVAVVFA   82 (391)
Q Consensus         4 ~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~-~~~~~~~~~l~~~l~~   82 (391)
                      ..+..++++||++||+++.....+++|++|||+||+.+|+|+++||+|+|++||.++||++.. .+++..++.+.     
T Consensus        30 ~~l~~~~~~Fa~~L~~~l~~~~~~~~Niv~SP~SI~~aLaml~~GA~g~T~~el~~~L~~~~~~~~i~~~~~~l~-----  104 (390)
T 2oay_A           30 AVLGDALVDFSLKLYHAFSAMKKVETNMAFSPFSIASLLTQVLLGAGENTKTNLESILSYPKDFTCVHQALKGFT-----  104 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHHCC----CCCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCTTCTTHHHHHHTTC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCEEECHHHHHHHHHHHHhhcccHHHHHHHHHhCCCCcHHHHHHHHHHHh-----
Confidence            456778999999999999632357899999999999999999999999999999999999764 45655554321     


Q ss_pred             CCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCc
Q 016311           83 DGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNS  162 (391)
Q Consensus        83 ~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~  162 (391)
                            ...+.++|+||+++++.+.++|++.++++|+++++.+|+.  ++.+++.||+||+++|+|+|+++++  +++++
T Consensus       105 ------~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~~~~~--~~~a~~~IN~WV~~~T~gkI~~ll~--~l~~~  174 (390)
T 2oay_A          105 ------TKGVTSVSQIFHSPDLAIRDTFVNASRTLYSSSPRVLSNN--SDANLELINTWVAKNTNNKISRLLD--SLPSD  174 (390)
T ss_dssp             ------CSSEEEEEEEEECTTSCCCHHHHHHHHHHHSCCCEECCSC--HHHHHHHHHHHHHHTTTTSCSCSCS--CCCTT
T ss_pred             ------hCchhhhhhHhHhcCCcccHHHHHHHHHHhCceeeeccCC--hHHHHHHHHHHHHHhhCCccccccc--ccCcc
Confidence                  1248999999999999999999999999999999999853  6789999999999999999999995  79999


Q ss_pred             CeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccc-cccccc--cCCeEEEEeecCCCCCCceEEEEEE
Q 016311          163 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK-NQFVSA--FDGFKVLGLPYKQGEDKRRFSMYFF  239 (391)
Q Consensus       163 t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~-~~~~~~--~~~~~vveLp~~~~~~~~~~sm~ii  239 (391)
                      |+++|+||+||+|.|+.+|++..|..++|+.. +++++||||++.. .+.|.+  ..++++++|||.+     ++||+||
T Consensus       175 t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~-~~~v~V~mM~~~~~~~~~~~~~~l~~~vleLpy~~-----~~sm~ii  248 (390)
T 2oay_A          175 TRLVLLNAIYLSAKWKTTFDPKKTRMEPFHFK-NSVIKVPMMNSKKYPVAHFIDQTLKAKVGQLQLSH-----NLSLVIL  248 (390)
T ss_dssp             CCEEEEEEEEEEEEBSSCCCTTSCEEEEECC---CCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBST-----TEEEEEE
T ss_pred             cceEEEeeEEEecccCCCCCccccEEeeeEEC-CceEEEEEEEeCceeEEEEecccCceEEEEEecCC-----cEEEEEE
Confidence            99999999999999999999999999999985 5678999999764 233334  3479999999965     5999999


Q ss_pred             ecCCC-CChHHHHHHhcCchHHHhhcC---CCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCC
Q 016311          240 LPDAK-DGLPTLLEKMGSESKFLDHHL---PSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSP  315 (391)
Q Consensus       240 lP~~~-~~l~~l~~~L~~~~~~l~~~~---~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~  315 (391)
                      ||++. .+|.+++++|+.  ..+..|+   ...+...++|.||||++++++||+++|++||+.+ |+. .||||||++  
T Consensus       249 LP~~~~~~L~~le~~L~~--~~l~~~~~~l~~~~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~-f~~-~Adfsgis~--  322 (390)
T 2oay_A          249 VPQNLKHRLEDMEQALSP--SVFKAIMEKLEMSKFQPTLLTLPRIKVTTSQDMLSIMEKLEFFD-FSY-DLNLCGLTE--  322 (390)
T ss_dssp             EESSTTSCHHHHHHHCCH--HHHHHHHHHHHTCCEEEEEEEEECCEEEEEEEHHHHHGGGSSSC-GGG-GCCCTTTCS--
T ss_pred             eCCccCCCHHHHHHHhCH--HHHHHHHHhCcccccceeEEecceEEEeccccHHHHHhhcCccc-ccc-cCCccccCC--
Confidence            99985 589999999973  3343332   2333345799999999999999999999999999 875 799999998  


Q ss_pred             CCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhhccCCCCeEEEeecCeeEEEEECCCCcEEEEEEecCCC
Q 016311          316 VGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL  389 (391)
Q Consensus       316 ~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~  389 (391)
                       ..+++|++++||+.|+|||+|++|+|+|++.+ .++     ...|++||||+|+|+|+.||.|||+|+|.+|.
T Consensus       323 -~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~-~~~-----~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~  389 (390)
T 2oay_A          323 -DPDLQVSAMQHQTVLELTETGVEAAAASAISV-ART-----LLVFEVQQPFLFMLWDQQHKFPVFMGRVYDPR  389 (390)
T ss_dssp             -CCCCCCCCEEEEEEEEECSSEEEEEEEEEESC-CCC-----EEECCCCSCEEEEEEETTTTEEEEEEEECCC-
T ss_pred             -CCCeEEcchhhcceEEECCCCccccccccccc-cCC-----CCeEEecCCEEEEEEECCCCCEEEEEEecCCC
Confidence             46899999999999999999999999998533 221     35799999999999999999999999999996


No 35 
>1hle_A Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=100.00  E-value=5.5e-74  Score=546.70  Aligned_cols=331  Identities=30%  Similarity=0.453  Sum_probs=301.1

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHHhh
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVVFA   82 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l~~   82 (391)
                      |.++..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..++++..++.+...+.+
T Consensus         2 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~   80 (345)
T 1hle_A            2 MEQLSTANTHFAVDLFRALN-ESDPTGNIFISPLSISSALAMIFLGTRGNTAAQVSKALYFDTVEDIHSRFQSLNADINK   80 (345)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH-HHCSSSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHTGGGSTTHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHHh-hcCCCCCEEEchHHHHHHHHHHHHhccChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhC
Confidence            34677899999999999998 44678999999999999999999999999999999999998666788899999888753


Q ss_pred             CCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCc
Q 016311           83 DGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNS  162 (391)
Q Consensus        83 ~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~  162 (391)
                         +..+..++++|+||+++++.+.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++++++++++
T Consensus        81 ---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~~~T~gkI~~ll~~~~l~~~  157 (345)
T 1hle_A           81 ---PGAPYILKLANRLYGEKTYNFLADFLASTQKMYGAELASVDFQQAPEDARKEINEWVKGQTEGKIPELLVKGMVDNM  157 (345)
T ss_dssp             ---SSCSSEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTTCHHHHHHHHHHHHHHHTTTSSSCSSCTTSSCTT
T ss_pred             ---CCCCcEEEEEEEeeecCCCchhHHHHHHHHHHhCCeEEEecCCCCHHHHHHHHHHHHHHHhcCchhhhcCCcCCCCc
Confidence               33567899999999999999999999999999999999999976688999999999999999999999998899999


Q ss_pred             CeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc--cCCeEEEEeecCCCCCCceEEEEEEe
Q 016311          163 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA--FDGFKVLGLPYKQGEDKRRFSMYFFL  240 (391)
Q Consensus       163 t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLp~~~~~~~~~~sm~iil  240 (391)
                      |+++|+||+||+|.|+.||++..|.+++|+..+|+.++||||++.+.++|..  ..++++|+|||+++    ++||+|||
T Consensus       158 t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vleLPy~~~----~~sm~iiL  233 (345)
T 1hle_A          158 TKLVLVNAIYFKGNWQQKFMKEATRDAPFRLNKKDTKTVKMMYQKKKFPYNYIEDLKCRVLELPYQGK----ELSMIILL  233 (345)
T ss_dssp             EEEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEGGGTEEEEEEEBTTS----SEEEEEEE
T ss_pred             ceEEEEEeeEecccccCCCCcccCcceeEEeCCCeEEEEEEEEeeceEeeEEeCCCCeEEEEecCCCC----eEEEEEEe
Confidence            9999999999999999999999999999999999999999999988766554  55899999999987    79999999


Q ss_pred             cCCC----CChHHHHHHhcCchHHHhhcCC--CCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCC
Q 016311          241 PDAK----DGLPTLLEKMGSESKFLDHHLP--SQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDS  314 (391)
Q Consensus       241 P~~~----~~l~~l~~~L~~~~~~l~~~~~--~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~  314 (391)
                      |++.    .+|.+++++|+  ...+..|..  ..+...++|.||||++++++||+++|++||++++|++..|||++|++ 
T Consensus       234 P~~~~~~~~~l~~l~~~L~--~~~l~~~~~~~~~~~~~v~v~lPKF~i~~~~~L~~~L~~lGi~~~F~~~~Adfs~is~-  310 (345)
T 1hle_A          234 PDDIEDESTGLEKIEKQLT--LDKLREWTKPENLYLAEVNVHLPRFKLEESYDLTSHLARLGVQDLFNRGKADLSGMSG-  310 (345)
T ss_dssp             ESSCCSSSSSCHHHHHTCC--HHHHHHHHCGGGCEEEEEEEEEECEEEEEEEECHHHHHHHTCCGGGCTTTCCCHHHHS-
T ss_pred             cCCCcccCcCHHHHHHHhC--HHHHHHHhhhhccccceEEEEcceEeeecccchHHHHHhcChhhcCCCCCCCcccCCC-
Confidence            9998    89999999997  345666655  34556789999999999999999999999999999965799999987 


Q ss_pred             CCCCCeeEeeeeeeeEEEEcCCCchhhhhhhh
Q 016311          315 PVGKNLYVSSIFQKSFIEVNEEGTEAAAASAA  346 (391)
Q Consensus       315 ~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~  346 (391)
                        ..+++|++++|++.|+|||+|++|+|+|++
T Consensus       311 --~~~l~vs~v~hka~ieV~E~GteAaAaT~~  340 (345)
T 1hle_A          311 --ARDLFVSKIIHKSFVDLNEEGTEAAAATAG  340 (345)
T ss_dssp             --SSCEEEEEEEEEEEEEECSSEEEEEEEEEE
T ss_pred             --CCCeEEeeEEEEEEEEECCCCeeeccccce
Confidence              468999999999999999999999999974


No 36 
>3f02_A Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 3fgq_A 1jjo_C 1jjo_A
Probab=100.00  E-value=1.7e-74  Score=551.90  Aligned_cols=330  Identities=28%  Similarity=0.501  Sum_probs=289.0

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh--hHHHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN--DQLNAFASELVAVV   80 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~--~~~~~~~~~l~~~l   80 (391)
                      +..+.+++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..  .+++..++.+...+
T Consensus        16 ~~~l~~~~~~Fa~~L~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~G~T~~ql~~~L~~~~~~~~~~~~~~~~l~~~l   94 (359)
T 3f02_A           16 ATFPEEAIADLSVNMYNRLR-ATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLKNGEEFSFLKEFSNMV   94 (359)
T ss_dssp             -----CHHHHHHHHHHHHHH-HHSTTCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTCCC----CHHHHHHCC----
T ss_pred             cHHHHHHHHHHHHHHHHHHh-hcCCCCCEEEcHHHHHHHHHHHHhhcCChHHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            45677899999999999998 4567899999999999999999999999999999999999864  46778888877666


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      .+   +..+..+.++|+||+++++++.++|++.++++|+++++.+||. +++.+++.||+||+++|+|+|++++++++++
T Consensus        95 ~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~-~~~~a~~~IN~WV~~~T~gkI~~ll~~~~l~  170 (359)
T 3f02_A           95 TA---KESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFS-QNVAVANYINKWVENNTNNLVKDLVSPRDFD  170 (359)
T ss_dssp             ---------CEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTT-SHHHHHHHHHHHHHHTTTTCSCCSSCGGGCS
T ss_pred             hc---CCCCcEEEEEEEEEEeCCCccchHHHHHHHHHhcCceEEcCCC-CHHHHHHHHHHHHHhhhCCcccccCCcccCC
Confidence            42   2456789999999999999999999999999999999999999 4789999999999999999999999988999


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--Ce------EEEEeecCCCCCCc
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GF------KVLGLPYKQGEDKR  232 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~------~vveLp~~~~~~~~  232 (391)
                      ++|+++|+||+||+|.|+.||++..|..++|+..+|++++||||++.+.++|++.+  ++      ++|+|||+++    
T Consensus       171 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~~~y~~~~~l~a~~~~~~~vleLPY~~~----  246 (359)
T 3f02_A          171 AATYLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGD----  246 (359)
T ss_dssp             TTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEECTTSCEEEEEEEEEEEEEEEEEEECCC---CCEEEEEEEEBTTS----
T ss_pred             CCceEEEEeHHHHhHHhhccCCcccceeeeeEecCCcEEEccceEeeceEeEEEccCcCcccccccEEEEeEcCCC----
Confidence            99999999999999999999999999999999999999999999999888776643  44      9999999987    


Q ss_pred             eEEEEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCC
Q 016311          233 RFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMV  312 (391)
Q Consensus       233 ~~sm~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is  312 (391)
                      ++||+||||+++.+|.+++++|+  ...+..|....+...++|.||||++++++||+++|++||++++|+. .||||+|+
T Consensus       247 ~~sm~iiLP~~~~~L~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfsgis  323 (359)
T 3f02_A          247 EISMMLVLSRQEVPLATLEPLVK--AQLVEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIK-DANLTGLS  323 (359)
T ss_dssp             SEEEEEEECCTTSCHHHHGGGCC--HHHHHHHHHHCEEEEEEEEEECEEEEEEEEHHHHHHHHTCCGGGST-TCCCTTTC
T ss_pred             cEEEEEEEcCCCCCHHHHHHHhC--HHHHHHHHHhCcceEEEEEeeeeEeEeeechHHHHHHcCchhhcCC-CCCccccC
Confidence            79999999999999999999997  3345556555566778999999999999999999999999999996 89999998


Q ss_pred             CCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhhh
Q 016311          313 DSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAAT  347 (391)
Q Consensus       313 ~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~  347 (391)
                      +   ..+++|++++|++.|||||+|++|+|+|++.
T Consensus       324 ~---~~~l~vs~v~hka~ieVnE~GteAaAaT~~~  355 (359)
T 3f02_A          324 D---NKEIFLSKAIHKSFLEVNEEGSEAAAVSGMI  355 (359)
T ss_dssp             S---CTTEEEEEEEEEEEEEECSSEEEEEEEEEEE
T ss_pred             C---CCCeeEEEEEEEEEEEECCCCchhhhhheee
Confidence            7   4789999999999999999999999999853


No 37 
>3ndd_A Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 3ndf_A 7api_A* 8api_A* 9api_A* 1d5s_A 1ezx_A 3t1p_A 2d26_A 1qmb_A
Probab=100.00  E-value=4.4e-73  Score=539.75  Aligned_cols=326  Identities=26%  Similarity=0.450  Sum_probs=295.8

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC----hhHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----NDQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~----~~~~~~~~~~l~~   78 (391)
                      ...+..++++||++||+++. ...+++|++|||+||+.+|+|+++||+|+|++||.++||++.    .++++..++.+..
T Consensus         8 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~~~l~~   86 (343)
T 3ndd_A            8 FNKITPNLAEFAFSLYRQLA-HQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLR   86 (343)
T ss_dssp             -CTTHHHHHHHHHHHHHHHH-HHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhHHHHHHHHHHh-hcCCCCCEEEChHHHHHHHHHHHhhccchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence            45677899999999999998 456789999999999999999999999999999999999974    2578889999988


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+.+   +..+..+.++|+||+++++.+.++|++.++++|+++++.+||.+ |+.+++.||+||+++|+|+|+++++  +
T Consensus        87 ~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~wV~~~T~g~I~~ll~--~  160 (343)
T 3ndd_A           87 TLNQ---PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGD-TEEAKKQINDYVEKGTQGKIVDLVK--E  160 (343)
T ss_dssp             HHTS---CCTTCEEEEEEEEEEETTCCCCHHHHHHHHHHHCEEEEEECTTS-HHHHHHHHHHHHHHHTTTSSCSCCS--C
T ss_pred             HHhC---CCCCceEEeehhhHhhCCCChhHHHHHHHHHHhccccEeecCCC-HHHHHHHHHHHHHHhhcCchhhhhh--c
Confidence            8753   34567899999999999999999999999999999999999995 7899999999999999999999997  7


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecCCCCCCceEEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYKQGEDKRRFSM  236 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~~~~~~~~~sm  236 (391)
                      ++++|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.++|...  .++++|+|||+++     ++|
T Consensus       161 l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~~~~~~~~l~~~vleLPY~~~-----~sm  235 (343)
T 3ndd_A          161 LDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHAKKLSSWVLLMKYLGN-----ATA  235 (343)
T ss_dssp             CCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEEEGGGTEEEEEEEBSSS-----EEE
T ss_pred             CCCCceEEEEeHHHHhHHHhcccCCccccCcceecCCCcEEEEEEEEEEeeEEEEEeccCCeEEEEEecCCC-----eEE
Confidence            999999999999999999999999999999999999999999999999987776554  4899999999974     899


Q ss_pred             EEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCC
Q 016311          237 YFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPV  316 (391)
Q Consensus       237 ~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~  316 (391)
                      +||||++ .+|.+++++|+  ...+.+|.+..+...++|.||||++++++||+++|++||++++|++ .||||+|++   
T Consensus       236 ~iiLP~~-~~l~~le~~L~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~-~Adfsgis~---  308 (343)
T 3ndd_A          236 IFFLPDE-GKLQHLENELT--HDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSN-GADLSGVTE---  308 (343)
T ss_dssp             EEEEECT-TCHHHHHHHCC--HHHHHHHHHCCCCEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCTTTCS---
T ss_pred             EEEEeCc-cCHHHHHHHhC--HHHHHHHHHhCCcceEEEecccEEEeeccchHHHHHhCCcHhhcCC-CCCCcccCC---
Confidence            9999998 58999999997  3455666555556678999999999999999999999999999998 899999998   


Q ss_pred             CCCeeEeeeeeeeEEEEcCCCchhhhhhhhh
Q 016311          317 GKNLYVSSIFQKSFIEVNEEGTEAAAASAAT  347 (391)
Q Consensus       317 ~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~  347 (391)
                      ..+++|++++|++.|||||+|++|+|+|++.
T Consensus       309 ~~~l~vs~v~hka~ieV~E~GteAaAaT~~~  339 (343)
T 3ndd_A          309 EAPLKLSKAVHKAVLTIDEKGTEAAPDDDDE  339 (343)
T ss_dssp             SSCEEEEEEEEEEEEEECSSEEEEEEEEEEE
T ss_pred             CCCeeEEEEEEEEEEEECCCCcceeccccee
Confidence            4789999999999999999999999999753


No 38 
>2h4p_A MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_A
Probab=100.00  E-value=4.2e-73  Score=548.42  Aligned_cols=330  Identities=29%  Similarity=0.488  Sum_probs=298.8

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----------------
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----------------   66 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----------------   66 (391)
                      +..+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..                
T Consensus        26 ~~~l~~~~~~Fa~~L~k~l~-~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~  104 (394)
T 2h4p_A           26 MEQVSASIGNFTVDLFNKLN-ETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESSSVARPSRGRP  104 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTSSCC----------------
T ss_pred             HHHHHHHHHHHHHHHHHHHh-ccCCCCCEEEChHHHHHHHHHHHHhccChHHHHHHHHhCCCcccccccccccccccccc
Confidence            45677899999999999998 4467899999999999999999999999999999999999752                


Q ss_pred             ------------hHHHHHHHHHHHHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHH
Q 016311           67 ------------DQLNAFASELVAVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEV  134 (391)
Q Consensus        67 ------------~~~~~~~~~l~~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a  134 (391)
                                  ++++..++.+...+.+   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.++++.+
T Consensus       105 ~~~~~~~~~~~~~~i~~~~~~l~~~l~~---~~~~~~l~~an~l~~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~~~~~a  181 (394)
T 2h4p_A          105 KRRRMDPEHEQAENIHSGFKELLTAFNK---PRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQS  181 (394)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHTC---CCSSSEEEEEEEEEEETTSCCCHHHHHHHHHHHCCEEEEECTTTCHHHH
T ss_pred             cccccccccccHHHHHHHHHHHHHHhhc---CCCCcEEEEEEEEEEeCCCCccHHHHHHHHHHhCCeeEEecCcCCHHHH
Confidence                        5778888888887753   3356789999999999999999999999999999999999997668899


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCCCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccc
Q 016311          135 SREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSA  214 (391)
Q Consensus       135 ~~~iN~wv~~~T~g~i~~~l~~~~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~  214 (391)
                      ++.||+||+++|+|+|++++++++++++|+++|+||+||+|.|+.+|++..|.+++|+..+|+.++||||++.+.++|..
T Consensus       182 ~~~IN~WV~~~T~gkI~~ll~~~~l~~~T~lvLvNAiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~f~~~~  261 (394)
T 2h4p_A          182 RKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLI  261 (394)
T ss_dssp             HHHHHHHHHHHTTTCC-CCSCTTTSCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHhhCCchhhccCccccCCccceeeeeeeeEEceeCCCCCcccccceEEEecCCeEEECceEeccCceeeEE
Confidence            99999999999999999999988999999999999999999999999999999999999999999999999988766544


Q ss_pred             --cCCeEEEEeecCCCCCCceEEEEEEecCCC----CChHHHHHHhcCchHHHhhcCC--CCceeeeeeeceeeeeeccC
Q 016311          215 --FDGFKVLGLPYKQGEDKRRFSMYFFLPDAK----DGLPTLLEKMGSESKFLDHHLP--SQRVEVGDFRIPRFKISFGI  286 (391)
Q Consensus       215 --~~~~~vveLp~~~~~~~~~~sm~iilP~~~----~~l~~l~~~L~~~~~~l~~~~~--~~~~~~v~l~lPkf~i~~~~  286 (391)
                        ..++++|+|||+++    ++||+||||++.    .+|.+++++|+  ...+..|..  ..+...++|.||||++++++
T Consensus       262 ~~~l~~~vleLPY~~~----~~sM~iiLP~~~~~~~~~L~~le~~L~--~~~l~~~~~~~~~~~~~v~v~lPKFkie~~~  335 (394)
T 2h4p_A          262 MEKMNFKMIELPYVKR----ELSMFILLPDDIKDGTTGLEQLERELT--YERLSEWADSKMMTETLVDLHLPKFSLEDRI  335 (394)
T ss_dssp             ETTTTEEEEEEEBGGG----SEEEEEEEESSCCSSSSSCHHHHHSCC--HHHHHHHHTCTTCEEEEEEEEEECEEEEEEE
T ss_pred             eCCCCEEEEEeecCCC----cEEEEEEecCCCcccCccHHHHHHHhC--HHHHHHHhhhhccccceEEEecceEEEeeee
Confidence              56899999999987    799999999998    89999999997  345666655  35556789999999999999


Q ss_pred             CcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCCCeeEeeeeeeeEEEEcCCCchhhhhhhh
Q 016311          287 EVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEAAAASAA  346 (391)
Q Consensus       287 dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~  346 (391)
                      ||+++|++|||+++|+. .|||++|++   ..+++|++++|++.|+|||+|++|+|+|++
T Consensus       336 dL~~~L~~lGi~~~F~~-~Adfsgis~---~~~l~vs~v~hka~ieVnE~GteAaAaT~~  391 (394)
T 2h4p_A          336 DLRDTLRNMGMTTAFTT-NADFRGMTD---KKDLAISKVIHQSFVAVDEKGTEAAAATAV  391 (394)
T ss_dssp             ECHHHHHHHTCCGGGST-TCCCTTSCS---SSCCCEEEEEEEEEEEECSSEEEEEEEEEE
T ss_pred             chHHHHHhcCCccccCC-ccCcccccC---CCCeEEeeeEEEEEEEECCCCchhhcceee
Confidence            99999999999999995 899999997   468999999999999999999999999974


No 39 
>3dy0_A N-terminus plasma serine protease inhibitor; serpin, blood clotting, hydrolase inhibitor; HET: IDS SGN; 1.55A {Homo sapiens} PDB: 1lq8_A* 2hi9_A*
Probab=100.00  E-value=8.6e-73  Score=535.90  Aligned_cols=321  Identities=26%  Similarity=0.451  Sum_probs=289.2

Q ss_pred             hhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----hHHHHHHHHHHHHHhh
Q 016311            7 ISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----DQLNAFASELVAVVFA   82 (391)
Q Consensus         7 ~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----~~~~~~~~~l~~~l~~   82 (391)
                      ..++++||++||+++. ...+++|++|||+||+.+|+|+++||+|+|++||.++||++..    .+++..++.+...+.+
T Consensus         6 ~~~~~~Fa~~l~~~l~-~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~~~l~~~l~~   84 (336)
T 3dy0_A            6 PSSRRDFTFDLYRALA-SAAPSQNIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQ   84 (336)
T ss_dssp             ----CCHHHHHHHHHH-HHSTTSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHTTS
T ss_pred             cchhhHHHHHHHHHHh-hhCCCCCEEEchHHHHHHHHHHHhHCcHHHHHHHHHHhCCCCCcCCHHHHHHHHHHHHHHHhC
Confidence            3578899999999998 4567899999999999999999999999999999999999863    4788889998887753


Q ss_pred             CCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCc
Q 016311           83 DGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNS  162 (391)
Q Consensus        83 ~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~  162 (391)
                         +..+..+.++|+||+++++++.++|++.++++|+++++.+||.+ |+.+++.||+||+++|+|+|+++++  +++++
T Consensus        85 ---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~wV~~~T~g~I~~l~~--~l~~~  158 (336)
T 3dy0_A           85 ---PRDGFQLSLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRD-SAGAMKQINDYVAKQTKGKIVDLLK--NLDSN  158 (336)
T ss_dssp             ---CCSSSEEEEEEEEEECTTCCBCHHHHHHHHHHHCCEEEECCTTS-HHHHHHHHHHHHHHHTTTSSCCCCC--SCCSC
T ss_pred             ---CCCCcEEEEeehhhhCCCCCccHHHHHHHHHHhCCeeEEECCCC-hHHHHHHHHHHHHHhhcCcHhHhhc--CCCCC
Confidence               34567899999999999999999999999999999999999995 7899999999999999999999997  79999


Q ss_pred             CeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecCCCCCCceEEEEEEe
Q 016311          163 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYKQGEDKRRFSMYFFL  240 (391)
Q Consensus       163 t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~~~~~~~~~sm~iil  240 (391)
                      |+++|+||+||+|.|+.||++..|..++|+..+|++++||||++.+.++|...  .++++|+|||+++     ++|+|||
T Consensus       159 t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~f~~~~~~~l~~~vleLPy~~~-----~sm~iiL  233 (336)
T 3dy0_A          159 AVVIMVNYIFFKAKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLDRNLSCRVVGVPYQGN-----ATALFIL  233 (336)
T ss_dssp             EEEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSSS-----CEEEEEE
T ss_pred             CeEEeEehheeeeeccCCCCcccccccceeccCCcEEEEeeEEEEeEEEEEEecCCCeEEEEeecCCC-----eEEEEEe
Confidence            99999999999999999999999999999999999999999999987776554  4899999999874     8999999


Q ss_pred             cCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCCCe
Q 016311          241 PDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGKNL  320 (391)
Q Consensus       241 P~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~~l  320 (391)
                      |++ .+|.+++++|+  ...+.+|.+..+...++|.||||++++++||+++|++||++++|++ .||||+|++   ..++
T Consensus       234 P~~-~~l~~le~~L~--~~~l~~~~~~l~~~~v~v~lPKF~i~~~~~L~~~L~~lGi~~~F~~-~Adfsgis~---~~~l  306 (336)
T 3dy0_A          234 PSE-GKMQQVENGLS--EKTLRKWLKMFKKRQLELYLPKFSIEGSYQLEKVLPSLGISNVFTS-HADLSGISN---HSNI  306 (336)
T ss_dssp             ECT-TCHHHHHHHCC--HHHHHHHHHHCEEEEEEEEEECEEEEEEEEGGGTGGGGTCCGGGST-TCCCTTTBC---STTC
T ss_pred             cCC-CCHHHHHHHhC--HHHHHHHHHhCCcceEEEEcCcEEEEeccchHHHHHhCChhhhhCC-CCCcccccC---CCCc
Confidence            988 68999999997  3445555555556678999999999999999999999999999998 899999987   4789


Q ss_pred             eEeeeeeeeEEEEcCCCchhhhhhhh
Q 016311          321 YVSSIFQKSFIEVNEEGTEAAAASAA  346 (391)
Q Consensus       321 ~v~~~~q~~~l~v~E~G~~a~a~t~~  346 (391)
                      +|++++|++.|||||+|++|+|+|++
T Consensus       307 ~vs~v~hka~ieV~E~GteAaAaT~~  332 (336)
T 3dy0_A          307 QVSEMVHKAVVEVDESGTRAAAATGT  332 (336)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEEEE
T ss_pred             eeeeeEEEEEEEECCCcchhhhheee
Confidence            99999999999999999999999974


No 40 
>2xn6_A Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn7_A* 2xn5_A* 2riv_A 2xn3_A* 2riw_A*
Probab=100.00  E-value=2.1e-72  Score=536.15  Aligned_cols=331  Identities=24%  Similarity=0.361  Sum_probs=296.4

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----hHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----DQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----~~~~~~~~~l~~   78 (391)
                      +..+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..    ++++..++.+..
T Consensus         8 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~   86 (350)
T 2xn6_A            8 LYKMSSINADFAFNLYRRFT-VETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTPMVEIQHGFQHLIC   86 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH-HHSTTSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hcCCCCCEEEchHHHHHHHHHHHhhccChHHHHHHHHhCCCccCCCHHHHHHHHHHHHH
Confidence            45677899999999999997 4567899999999999999999999999999999999999742    578889999988


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+..   ...+..++++|+||+++++.+.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  +
T Consensus        87 ~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll~--~  160 (350)
T 2xn6_A           87 SLNF---PKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSN-ISAAKQEINSHVEMQTKGKVVGLIQ--D  160 (350)
T ss_dssp             HHHS---CBTTEEEEEEEEEEEETTCCBCHHHHHHHHHHSCEEEEEECTTS-HHHHHHHHHHHHHHHTTTCSCCCCS--C
T ss_pred             HhhC---CCCCcEEEEEEeehhhCCCcHHHHHHHHHHHHhCCEEEeeCCCC-HHHHHHHHHHHHHHhhCCchhhhhc--c
Confidence            8763   23557899999999999999999999999999999999999985 7889999999999999999999996  5


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccC-eEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCCCceEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYD-FHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFS  235 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~-F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~~~~~s  235 (391)
                      ++++|+++|+||+||+|.|+.+|++..|..++ |+..+|+.++||||++.+.++|...+  ++++|+|||+++     .+
T Consensus       161 l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~l~~~vleLPy~~~-----~s  235 (350)
T 2xn6_A          161 LKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMDQYYHLVDMELNCTVLQMDYSKN-----AL  235 (350)
T ss_dssp             CCTTCCEEEEEEEEEEEEBSSCCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSSS-----EE
T ss_pred             cCCCceeeeeeHHHHhhHhhccCChhhCccCCceEeCCCcEEEEEEEEEeeeEeEEEeCCCCeEEEEeecCCC-----eE
Confidence            99999999999999999999999999999999 99999999999999999877776644  799999999986     59


Q ss_pred             EEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCC
Q 016311          236 MYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSP  315 (391)
Q Consensus       236 m~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~  315 (391)
                      |+||||++ .+|.+++++|+  ...+..|....+...++|.||||++++++||+++|++|||+++|+. .||||+|++  
T Consensus       236 m~iiLP~~-~~l~~le~~L~--~~~l~~~~~~~~~~~v~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfs~is~--  309 (350)
T 2xn6_A          236 ALFVLPKE-GQMESVEAAMS--SKTLKKWNRLLQKGWVDLFVPKFSISATYDLGATLLKMGIQHAYSE-NADFSGLTE--  309 (350)
T ss_dssp             EEEEEECT-TCHHHHHHHCS--HHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHHTCCGGGST-TCCCTTTBT--
T ss_pred             EEEEecCC-CCHHHHHHHhC--HHHHHHHHHhhhcccceeeeeEEEEEeeecHHHHHHhcCchhhccC-cCCcccccC--
Confidence            99999998 68999999997  3445555555556678999999999999999999999999999985 899999997  


Q ss_pred             CCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhhhhhh
Q 016311          316 VGKNLYVSSIFQKSFIEVNEEGTEAAAASAATVVLRS  352 (391)
Q Consensus       316 ~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~~~~~  352 (391)
                       ..+++|++++|++.|+|||+|++|+|+|++.+..++
T Consensus       310 -~~~l~vs~v~hka~ieVnE~GteAaAaT~~~~~~~s  345 (350)
T 2xn6_A          310 -DNGLKLSNAAHKAVLHIGEKGTEAAGAMFLEAIPRS  345 (350)
T ss_dssp             -TCCEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEC-
T ss_pred             -CCCceeeeeeEEEEEEECCCceeeccccceeecccC
Confidence             468999999999999999999999999986544333


No 41 
>4afx_A Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_A 3h5c_A* 3f1s_A*
Probab=100.00  E-value=4e-72  Score=538.53  Aligned_cols=327  Identities=24%  Similarity=0.387  Sum_probs=295.4

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCC-----hhHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS-----NDQLNAFASELV   77 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~-----~~~~~~~~~~l~   77 (391)
                      ...+..++++||++||+++. ...++ |+||||+||+.+|+|+++||+|+|++||.++||++.     .++++..++.+.
T Consensus        51 ~~~l~~~~~~Fa~~L~~~l~-~~~~~-Niv~SP~SI~~aLaml~~GA~G~T~~ql~~~L~~~~~~~~~~~~~~~~~~~l~  128 (387)
T 4afx_A           51 RQQLAKETSNFGFSLLRKIS-MRHDG-NMVFSPFGMSLAMTGLMLGATGPTETQIKRGLHLQALKPTKPGLLPSLFKGLR  128 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHCCS-CEEECHHHHHHHHHHHHTTCCTHHHHHHHHHTTCTTCSCCCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hcCCC-CEEEChHHHHHHHHHHHhhccchHHHHHHHHhCCCccccCCHHHHHHHHHHHH
Confidence            46677899999999999998 34556 999999999999999999999999999999999985     267888999988


Q ss_pred             HHHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCC
Q 016311           78 AVVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPG  157 (391)
Q Consensus        78 ~~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~  157 (391)
                      ..+..    ..+..+.++|+||+++++.+.+.|++.++++|++++..+||.+ +..+++.||+||+++|+|+|++++  +
T Consensus       129 ~~l~~----~~~~~l~~an~lf~~~~~~l~~~F~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll--~  201 (387)
T 4afx_A          129 ETLSR----NLELGLTQGSFAFIHKDFDVKETFFNLSKRYFDTECVPMNFRN-ASQAKRLMNHYINKETRGKIPKLF--D  201 (387)
T ss_dssp             HHHHH----CGGGCEEEEEEEEEETTCCBCHHHHHHHHHHHCCEEEEECTTS-HHHHHHHHHHHHHHHTTTSSSCSC--C
T ss_pred             HHhcc----CCCceEEEEEEEeecCCCchhHHHHHHHHHHhccceEecCCCC-hHHHHHHHHHHHHHhcCCCccccc--c
Confidence            87752    3456799999999999999999999999999999999999986 677999999999999999999999  6


Q ss_pred             CCCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccccccccc--CCeEEEEeecCCCCCCceEE
Q 016311          158 SVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF--DGFKVLGLPYKQGEDKRRFS  235 (391)
Q Consensus       158 ~~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLp~~~~~~~~~~s  235 (391)
                      +++++|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.++|+..  .++++|+|||.+.     +|
T Consensus       202 ~l~~~t~lvLvNAiyFKg~W~~~F~~~~T~~~~F~~~~g~~v~V~mM~~~~~f~y~~~~~l~~~vleLPY~~~-----~s  276 (387)
T 4afx_A          202 EINPETKLILVDYILFKGKWLTPFDPVFTEVDTFHLDKYKTIKVPMMYGAGKFASTFDKNFRCHVLKLPYQGN-----AT  276 (387)
T ss_dssp             CCCTTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEBTTS-----EE
T ss_pred             CCCCCceEEEEeeeEEEeecccCCCcccceeeeeecCCCcEEEEEEEEeeeeEeEEEecCCceEEEEEEcCCc-----EE
Confidence            8999999999999999999999999999999999999999999999999987776654  5899999999984     99


Q ss_pred             EEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCC
Q 016311          236 MYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSP  315 (391)
Q Consensus       236 m~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~  315 (391)
                      |+||||++..+|.+++++|+  ...+..|....+...++|.||||++++++||+++|++|||+++|++ .||||+|++. 
T Consensus       277 M~iiLP~~~~~L~~le~~L~--~~~l~~~~~~l~~~~v~v~LPKFki~~~~dL~~~L~~lGi~~~F~~-~ADfsgis~~-  352 (387)
T 4afx_A          277 MLVVLMEKMGDHLALEDYLT--TDLVETWLRNMKTRNMEVFFPKFKLDQKYEMHELLRQMGIRRIFSP-FADLSELSAT-  352 (387)
T ss_dssp             EEEEEESCCSSCCCGGGTCC--HHHHHHHHHTCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCTTTBSS-
T ss_pred             EEEEecCCCCCHHHHHHHhC--HHHHHHHHHhCceeEEEEecCcEEEEeeccHHHHHHhcChhhhhCC-CCCcccccCC-
Confidence            99999999889999999997  3455666555666778999999999999999999999999999998 8999999872 


Q ss_pred             CCCCeeEeeeeeeeEEEEcCCCchhhhhhhhhh
Q 016311          316 VGKNLYVSSIFQKSFIEVNEEGTEAAAASAATV  348 (391)
Q Consensus       316 ~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~~~  348 (391)
                       ..+++|++++|++.|+|||+|++|+|+|++.+
T Consensus       353 -~~~l~Vs~v~Hka~ieVnEeGteAAAaT~~~~  384 (387)
T 4afx_A          353 -GRNLQVSRVLQRTVIEVDERGTEAVAGILSEI  384 (387)
T ss_dssp             -CCCCEEEEEEEEEEEEECSSEEEEEEEEEEEE
T ss_pred             -CCCceeeeEEEEEEEEECCCcccccccceeee
Confidence             26899999999999999999999999998543


No 42 
>1as4_A Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A {Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_A* 4caa_A 3caa_A
Probab=100.00  E-value=6.1e-72  Score=531.43  Aligned_cols=325  Identities=27%  Similarity=0.415  Sum_probs=292.9

Q ss_pred             hhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh----hHHHHHHHHHHH
Q 016311            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN----DQLNAFASELVA   78 (391)
Q Consensus         3 ~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~----~~~~~~~~~l~~   78 (391)
                      +..+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||++..    ++++..++.+..
T Consensus         4 ~~~l~~~~~~Fa~~l~~~l~-~~~~~~Niv~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~   82 (341)
T 1as4_A            4 DLGLASANVDFAFSLYKQLV-LKAPDKNVIFSPLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQHLLR   82 (341)
T ss_dssp             --CHHHHHHHHHHHHHHHHH-HHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHh-ccCCCCcEEEchHHHHHHHHHHHhhccChHHHHHHHHhCCCCcCCCHHHHHHHHHHHHH
Confidence            45677899999999999997 4567899999999999999999999999999999999999742    578889999988


Q ss_pred             HHhhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCC
Q 016311           79 VVFADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGS  158 (391)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~  158 (391)
                      .+..   +..+..++++|+||+++++++.++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++  +
T Consensus        83 ~l~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~-~~~a~~~IN~WV~~~T~gkI~~ll~--~  156 (341)
T 1as4_A           83 TLNQ---SSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQD-SAAAKKLINDYVKNGTRGKITDLIK--D  156 (341)
T ss_dssp             HHCE---ECSSCEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTS-HHHHHHHHHHHHHHHTTTSCCCSCC--C
T ss_pred             HHhc---cCCCcEEEeeehhHHhCCCchhHHHHHHHHHHhCCceEecCCCC-HHHHHHHHHHHHHHhhcCchhhHhh--c
Confidence            8753   23567899999999999999999999999999999999999985 7889999999999999999999996  5


Q ss_pred             CCCcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeecccccccc-ccccccC--CeEEEEeecCCCCCCceEE
Q 016311          159 VDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN-QFVSAFD--GFKVLGLPYKQGEDKRRFS  235 (391)
Q Consensus       159 ~~~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~-~~~~~~~--~~~vveLp~~~~~~~~~~s  235 (391)
                      ++++|+++|+||+||+|.|+.||++..|.+++|+..+|++++||||++.+. ++|+..+  ++++++|||+++     .+
T Consensus       157 l~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~l~~~vleLPY~~~-----~s  231 (341)
T 1as4_A          157 LDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRDEELSCTVVELKYTGN-----AS  231 (341)
T ss_dssp             CCTTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSSS-----EE
T ss_pred             cCCCceEEEEEhHhhcchhcCCCCccccccceeEeCCCeEEEEEEEEecCceEEEEEecCCCeEEEEecCCCC-----cE
Confidence            999999999999999999999999999999999999999999999999987 7776644  899999999986     59


Q ss_pred             EEEEecCCCCChHHHHHHhcCchHHHhhcCCCCceeee-eeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCC
Q 016311          236 MYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVG-DFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDS  314 (391)
Q Consensus       236 m~iilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v-~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~  314 (391)
                      |+||||++ .+|.+++++|+  ...+..|.+..+...+ +|.||||++++++||+++|++||++++|+. .||||+|++ 
T Consensus       232 m~iiLP~~-~~l~~le~~L~--~~~l~~~~~~~~~~~v~~v~lPKFki~~~~dL~~~L~~lGi~~~F~~-~Adfs~is~-  306 (341)
T 1as4_A          232 ALFILPDQ-DKMEEVEAMLL--PETLKRWRDSLEFREIGELYLPKFSISRDYNLNDILLQLGIEEAFTS-KADLSGITG-  306 (341)
T ss_dssp             EEEEEECT-TCHHHHHHTCC--HHHHHHHHHHCEEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCHHHHS-
T ss_pred             EEEEeeCC-CCHHHHHHHhC--HHHHHHHHHhccccccceEeeeEEEEeeecchHHHHHHcCchhhccC-CCCcccccC-
Confidence            99999998 58999999997  3455555555556678 999999999999999999999999999985 899999997 


Q ss_pred             CCCCCeeEeeeeeeeEEEEcCCCchhhhhhhh
Q 016311          315 PVGKNLYVSSIFQKSFIEVNEEGTEAAAASAA  346 (391)
Q Consensus       315 ~~~~~l~v~~~~q~~~l~v~E~G~~a~a~t~~  346 (391)
                        ..+++|++++|++.|+|||+|++|+|+|++
T Consensus       307 --~~~l~vs~v~hka~ieVnE~GteAaAaT~~  336 (341)
T 1as4_A          307 --ARNLAVSQVVHKAVLDVFEEGTEASRATAV  336 (341)
T ss_dssp             --SSCEEEEEEEEEEEEEECSSEEEEEEEEEE
T ss_pred             --CCCEEEeeEEEEEEEEECCCccccccccce
Confidence              468999999999999999999999999974


No 43 
>1mtp_A Serine proteinase inhibitor (serpin), chain A; structural genomics, protease inhibitor; 1.50A {Thermobifida fusca} SCOP: e.1.1.1
Probab=100.00  E-value=1.6e-70  Score=517.61  Aligned_cols=316  Identities=23%  Similarity=0.411  Sum_probs=284.1

Q ss_pred             CchhhhhhhhhHHHHHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHH
Q 016311            1 MDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVV   80 (391)
Q Consensus         1 ~~~~~~~~~~~~fa~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l   80 (391)
                      ||...+..++++||++||+++. ...+++|+||||+||+.+|+|+++||+|+|++||.++||    ++++..++.+ ..+
T Consensus         1 ~~~~~l~~~~~~Fa~~l~~~l~-~~~~~~N~v~SP~Si~~aLaml~~GA~g~T~~el~~~L~----~~~~~~~~~l-~~l   74 (323)
T 1mtp_A            1 MSGGFLRDDHLEFALHLHRRLA-EAVPDGEVIWSPYSVACALGVLAAGARATTRTELTTLLG----TDPAPLLAAL-DRA   74 (323)
T ss_dssp             --CCSSCHHHHHHHHHHHHHHH-HHSTTCCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHT----SCHHHHHHHH-HHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh-ccCCCCCEEEchHHHHHHHHHHHhhcCchHHHHHHHHHH----HHHHHHHHHH-HHH
Confidence            7788888999999999999998 446789999999999999999999999999999999999    4677788888 666


Q ss_pred             hhCCCCCCCCeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCC
Q 016311           81 FADGSPSGGPRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVD  160 (391)
Q Consensus        81 ~~~~~~~~~~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~  160 (391)
                      .     ..+..+.++|+||+++++.+.++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++++++++
T Consensus        75 ~-----~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~WV~~~T~g~I~~l~~~~~l~  149 (323)
T 1mtp_A           75 V-----TDSPDLASRTVLWVSADVPVRSSFRATMHDRPDSDVRTADFRTNPEGVRATVNADIADATRGMIRELLPQGAVT  149 (323)
T ss_dssp             T-----CSCTTEEEEEEEEECTTSCBCHHHHHHHHHSTTCEEEECCTTTCHHHHHHHHHHHHHHHTTTSCSCSSCTTCSC
T ss_pred             h-----CCCcEEeeeeeeeeECCcEecHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHhcCcccccCCcCCCC
Confidence            3     34568999999999999999999999999999999999999866889999999999999999999999988999


Q ss_pred             CcCeEEEEEeeeeccccccccccCCCcccCeEeCCCceEeeccccccccccccccC--CeEEEEeecCCCCCCceEEEEE
Q 016311          161 NSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFSMYF  238 (391)
Q Consensus       161 ~~t~l~lvna~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLp~~~~~~~~~~sm~i  238 (391)
                      ++|+++|+||+||+|.|+.||++..|.+++|+ .+|++++||||++.+.++|++.+  ++++|+|   ++    ++||+|
T Consensus       150 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~-~~~~~~~V~mM~~~~~~~y~~~~~~~~~vleL---~~----~~sm~i  221 (323)
T 1mtp_A          150 PDLRAILTNALWAKARWTTPFEAHLTREGTFR-TPRGPKRVPFMHRTKTMPYATARGWRMVTLHA---HD----ELAVDV  221 (323)
T ss_dssp             TTEEEEEEEEEEEEEEBSSCCCGGGCEEEEEE-ETTEEEEEEEEEEEEEEEEEEETTEEEEEEEB---ST----TEEEEE
T ss_pred             cccceeeeeeeeeeccccCCCCcccCeeeeee-cCCeEEEeeEEEeeeeEeeEEeCCCCEEEEEE---CC----cEEEEE
Confidence            99999999999999999999999999999999 99999999999999888877766  5678999   44    699999


Q ss_pred             EecCCCCChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCC
Q 016311          239 FLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGK  318 (391)
Q Consensus       239 ilP~~~~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~  318 (391)
                      |||+  .+|.++++  +  ...+.+|.+..+...++|.||||++++++||+++|++||++++|+. .||||+|++   ..
T Consensus       222 iLP~--~~l~~l~~--~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~-~Adfs~is~---~~  291 (323)
T 1mtp_A          222 LLPP--GTNAAAVP--T--APLLTALHRRSASTSVELALPRFELTQPHQLVEVLAEAGVRTLFTA-SADLSGIST---VP  291 (323)
T ss_dssp             EECC--GGGTTCCC--C--HHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGST-TCCCTTTBS---SC
T ss_pred             EecC--CCHHHHHh--C--HHHHHHHHHhCcceeEEEEeeEEEEecccchHHHHHhCChhhhcCC-CCCcccCCC---CC
Confidence            9998  67887766  2  4456666555566778999999999999999999999999999995 899999988   35


Q ss_pred             CeeEeeeeeeeEEEEcCCCchhhhhhhh
Q 016311          319 NLYVSSIFQKSFIEVNEEGTEAAAASAA  346 (391)
Q Consensus       319 ~l~v~~~~q~~~l~v~E~G~~a~a~t~~  346 (391)
                       ++|++++|++.|+|||+|++|+|+|++
T Consensus       292 -l~vs~v~hka~ieV~E~GteAaAaT~~  318 (323)
T 1mtp_A          292 -LYVDTVIHQARLRVDERGAEGAAATAA  318 (323)
T ss_dssp             -CEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred             -ceeeeeEEEEEEEECCCccccccccce
Confidence             999999999999999999999999974


No 44 
>1f0c_A ICE inhibitor; apoptosis, caspase inhibitor, protease inhibitor, serpin, viral protein; 2.26A {Cowpox virus} SCOP: e.1.1.1 PDB: 1c8o_A
Probab=100.00  E-value=2.2e-67  Score=492.30  Aligned_cols=294  Identities=27%  Similarity=0.436  Sum_probs=259.1

Q ss_pred             HHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCChhHHHHHHHHHHHHHhhCCCCCCCCeeee
Q 016311           15 LSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSNDQLNAFASELVAVVFADGSPSGGPRLSV   94 (391)
Q Consensus        15 ~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~   94 (391)
                      ++||++++ ...+++|++|||+||+.+|+|+++||+|+|++||.++||++..+++                  ....+.+
T Consensus         1 ~~l~~~l~-~~~~~~N~~~SP~Si~~aLaml~~GA~g~T~~el~~~L~~~~~~~~------------------~~l~l~~   61 (305)
T 1f0c_A            1 MDIFREIA-SSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEADKNK------------------DDISFKS   61 (305)
T ss_dssp             CHHHHHHH-HTTTTSCEEECHHHHHHHHHHHHHHCCTHHHHHHHTTC---------------------------CCSEEE
T ss_pred             ChHHHHHh-ccCCCCCEEEchHHHHHHHHHHHHhcCChHHHHHHHHhCCCCcccc------------------chhhhhh
Confidence            37999998 4578899999999999999999999999999999999998753221                  1124699


Q ss_pred             eeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCcCeEEEEEeeeec
Q 016311           95 ANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFK  174 (391)
Q Consensus        95 ~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~t~l~lvna~~f~  174 (391)
                      +|+||+++++.+.++|++.++++|    +.+||.+ + .+++.||+||+++|+|+|+++++ ..++.+|+++|+||+||+
T Consensus        62 an~l~~~~~~~l~~~f~~~~~~~y----~~vdF~~-~-~a~~~IN~WV~~~T~g~I~~l~~-~~~~~~t~lvLvNaiyFk  134 (305)
T 1f0c_A           62 MNKVYGRYSAVFKDSFLRKIGDNF----QTVDFTD-C-RTVDAINKCVDIFTEGKINPLLD-EPLSPDTCLLAISAVYFK  134 (305)
T ss_dssp             EEEEEEETTSCBCHHHHHHHGGGE----EEECSSS-T-HHHHHHHHHHHHHTTTSSCCSCC-SCCCTTEEEEEEEEEEEE
T ss_pred             eeeEEEeCCCcHHHHHHHHHHHHh----hccCCCC-H-HHHHHHHHHHHHHhCCCcccccc-CCCCCCceeeeeehHhhh
Confidence            999999999999999999999999    7899986 5 89999999999999999999993 235566999999999999


Q ss_pred             cccccccccCCCcccCeEeCCCceEeeccccccc-cccccc--cC--CeEEEEeecCCCCCCceEEEEEEecCCCCChHH
Q 016311          175 GAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK-NQFVSA--FD--GFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPT  249 (391)
Q Consensus       175 ~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~-~~~~~~--~~--~~~vveLp~~~~~~~~~~sm~iilP~~~~~l~~  249 (391)
                      |.|+.||++..|..++|+..+|++++||||++.+ .++|++  ..  ++++++|||+++     +||+||||+++.+|.+
T Consensus       135 g~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~~~~~~~vleLPy~~~-----~sm~iiLP~~~~~l~~  209 (305)
T 1f0c_A          135 AKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEAFNHASVKESFGNFSIIELPYVGD-----TSMVVILPDNIDGLES  209 (305)
T ss_dssp             EEBSSCCCGGGCEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCTTCCEEEEEEEBSSS-----EEEEEEEESSTTCHHH
T ss_pred             hhhhccCCcccCeecEEEECCCEEEEEEEEEecCcceeeEEcccccCCCEEEEEeCCCC-----EEEEEEeCCCCCCHHH
Confidence            9999999999999999999999999999999988 777754  44  889999999874     9999999999999999


Q ss_pred             HHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCCCeeEeeeeeee
Q 016311          250 LLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGKNLYVSSIFQKS  329 (391)
Q Consensus       250 l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~~l~v~~~~q~~  329 (391)
                      ++++|+  ...+.+|.+..+...++|.||||++++++||+++|++||++++|++ .||||+|++    .+++|++++|++
T Consensus       210 l~~~L~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~dL~~~L~~lGi~~~F~~-~Adfs~is~----~~l~vs~v~hka  282 (305)
T 1f0c_A          210 IEQNLT--DTNFKKWCDSMDAMFIDVHIPKFKVTGSYNLVDALVKLGLTEVFGS-TGDYSNMCN----SDVSVDAMIHKT  282 (305)
T ss_dssp             HHTTCC--HHHHHHHHHTCEEEEEEEEEECEEEEEEEECHHHHHHTTCCSSSST-TCCCTTTBS----SCCEEEEEEEEE
T ss_pred             HHHHhC--HHHHHHHHhhCceeEEEEecceEEEEeeechHHHHHhcCCCcCCCC-ccccccCCC----CCcEeeeEEEEE
Confidence            999997  3456666666667778999999999999999999999999999997 899999985    579999999999


Q ss_pred             EEEEcCCCchhhhhhhh
Q 016311          330 FIEVNEEGTEAAAASAA  346 (391)
Q Consensus       330 ~l~v~E~G~~a~a~t~~  346 (391)
                      .|+|||+|++|+|+|++
T Consensus       283 ~ieV~E~GteAaAaT~~  299 (305)
T 1f0c_A          283 YIDVNEEYTEAAAATCA  299 (305)
T ss_dssp             EEEECSSEEEEEEEEEE
T ss_pred             EEEECCCceecccccee
Confidence            99999999999999975


No 45 
>1m93_B Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE inhibitor, viral protein; 1.65A {Cowpox virus} SCOP: e.1.1.1
Probab=100.00  E-value=7.2e-56  Score=401.36  Aligned_cols=237  Identities=27%  Similarity=0.421  Sum_probs=216.3

Q ss_pred             CeeeeeeeeeecCCCccchHHHHHHHcccCCeeEEecCCCChHHHHHHHHHHHHHHhCCcccccCCCCCCCCcCeEEEEE
Q 016311           90 PRLSVANGVWIDESLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFAN  169 (391)
Q Consensus        90 ~~l~~~n~i~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~iN~wv~~~T~g~i~~~l~~~~~~~~t~l~lvn  169 (391)
                      ..++++|+||+++++.++++|++.+++.|.    .+||.+  +.+++.||+||+++|+|+|+++++++ ++++|+++|+|
T Consensus         2 ~~l~~an~l~~~~~~~l~~~f~~~~~~~~~----~vdF~~--~~a~~~IN~WV~~~T~gkI~~ll~~~-l~~~t~lvLvN   74 (245)
T 1m93_B            2 ISFKSMNKVYGRYSAVFKDSFLRKIGDNFQ----TVDFTD--SRTVDAINKSVDIFTEGKINPLLDEP-LSPDTSLLAIS   74 (245)
T ss_dssp             CSEEEEEEEEEETTSCBCHHHHHHHCSCEE----EECTTS--THHHHHHHHHHHHHTTTSSCCSCCSC-CCTTCCEEEEE
T ss_pred             cEEEeEeeeeeeCCCCcCHHHHHHHHHHHH----hcCCCC--HHHHHHHHHHHHHHhcCchhhhcCCC-CCCCceEEEEE
Confidence            358999999999999999999999999874    799986  68999999999999999999999765 99999999999


Q ss_pred             eeeeccccccccccCCCcccCeEeCCCceEeecccc-ccccccccc--cC--CeEEEEeecCCCCCCceEEEEEEecCCC
Q 016311          170 ALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMT-SKKNQFVSA--FD--GFKVLGLPYKQGEDKRRFSMYFFLPDAK  244 (391)
Q Consensus       170 a~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~-~~~~~~~~~--~~--~~~vveLp~~~~~~~~~~sm~iilP~~~  244 (391)
                      |+||+|.|+.||++..|..++|+..+|+.++||||+ +.+.++|..  ..  ++++++|||+++     +||+||||++.
T Consensus        75 aiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~l~~~~~vleLPy~~~-----~sm~iiLP~~~  149 (245)
T 1m93_B           75 AVYFKAKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEAFNHASVKESFGNFSIIELPYVGD-----TSMVVILPDNI  149 (245)
T ss_dssp             EEEEEEEBSSCCCGGGCEEEEEEEETTEEEEEEEEEECSCEEEEEEECCTTCCEEEEEEEBSSS-----EEEEEEEESST
T ss_pred             eeeeechhcCCCCcccCceeeEEecCCcEEEEeeeeeccCceeEEEecccccCCEEEEEecCCC-----eEEEEEecCCC
Confidence            999999999999999999999999999999999999 887766654  34  899999999985     99999999999


Q ss_pred             CChHHHHHHhcCchHHHhhcCCCCceeeeeeeceeeeeeccCCcHHHhhcCCCCCCCCCCCCCCcCCCCCCCCCCeeEee
Q 016311          245 DGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGIEVSKVLKGLGLVLPFSGEGGGLAEMVDSPVGKNLYVSS  324 (391)
Q Consensus       245 ~~l~~l~~~L~~~~~~l~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~~~~l~v~~  324 (391)
                      .+|.+++++|+  ...+..+....+...++|.||||++++++||+++|++||++++|++ .||||+|++   . +++|++
T Consensus       150 ~~l~~l~~~L~--~~~l~~~~~~~~~~~v~v~lPKF~i~~~~~L~~~L~~lGi~~~F~~-~Adfs~is~---~-~l~vs~  222 (245)
T 1m93_B          150 DGLESIEQNLT--DTNFKKWSDSMDAMFIDVHIPKFKVTGSYNLVDALVKLGLTEVFGS-TGDYSNMSN---S-DVSVDA  222 (245)
T ss_dssp             TCHHHHHTTCC--HHHHHHHHHTCEEEECEEEEECEEEEEEEEHHHHHHHTTCTTSSST-TCCCTTTBS---S-CCCCCC
T ss_pred             CCHHHHHHHhC--HHHHHHHHHhCccceEEEECCeEEEeeeeccHHHHHhcCccccCCC-ccCcccccC---C-CceEee
Confidence            99999999997  3446666555666778999999999999999999999999999998 899999988   4 899999


Q ss_pred             eeeeeEEEEcCCCchhhhhhh
Q 016311          325 IFQKSFIEVNEEGTEAAAASA  345 (391)
Q Consensus       325 ~~q~~~l~v~E~G~~a~a~t~  345 (391)
                      ++|++.|+|||+|++|+|+|+
T Consensus       223 v~hka~ieV~E~GteAaAaT~  243 (245)
T 1m93_B          223 MIHKTYIDVNEEYTEAAAATS  243 (245)
T ss_dssp             EEEEEEEEECSSEEEEEEEEE
T ss_pred             EEEEeEEEECCCccccccccc
Confidence            999999999999999999986


No 46 
>1m93_A Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE inhibitor, viral protein; 1.65A {Cowpox virus} SCOP: e.1.1.1
Probab=99.45  E-value=5.5e-14  Score=95.05  Aligned_cols=51  Identities=25%  Similarity=0.554  Sum_probs=42.6

Q ss_pred             HHHHHHhhhcCCCCCcEEEChHHHHHHHHHHHhcCChhhHHHHHhhcCCCCh
Q 016311           15 LSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSN   66 (391)
Q Consensus        15 ~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~t~~el~~~L~~~~~   66 (391)
                      ++||+++. ...+++|++|||+||+.+|+|+++||+|+|+.||.++|+++..
T Consensus         1 ~~L~~~l~-~~~~~~Ni~~SP~Si~~aLaml~~GA~g~T~~ql~~~L~~~~~   51 (55)
T 1m93_A            1 MDIFREIA-SSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEAD   51 (55)
T ss_dssp             CHHHHHHH-HHTTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHTTC-----
T ss_pred             ChHHHHHH-hcCCCCCEEECHHHHHHHHHHHHhhccchHHHHHHHHhCCCcc
Confidence            37899997 4567899999999999999999999999999999999999754


No 47 
>3ndd_B Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 1ezx_B 3ndf_B 7api_B* 8api_B* 9api_B* 2d26_B
Probab=99.39  E-value=5.5e-13  Score=81.43  Aligned_cols=33  Identities=33%  Similarity=0.582  Sum_probs=30.8

Q ss_pred             CeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          358 KIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       358 ~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      +..|++||||+|+|+|+.|+.+||+|+|.+|.+
T Consensus         3 p~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~   35 (36)
T 3ndd_B            3 PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ   35 (36)
T ss_dssp             CCEEECCSCEEEEEEETTTCCEEEEEEESSCCC
T ss_pred             CCEEEeeCCEEEEEEECCCCcEEEEEEecCCCC
Confidence            357999999999999999999999999999985


No 48 
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=99.38  E-value=5.4e-13  Score=83.51  Aligned_cols=33  Identities=30%  Similarity=0.498  Sum_probs=31.0

Q ss_pred             CeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          358 KIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       358 ~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      +..|++||||+|+|+|+.|+.|||+|+|.+|.+
T Consensus         7 p~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~   39 (40)
T 2riv_B            7 HPIIQIDRSFMLLILERSTRSILFLGKVVNPTE   39 (40)
T ss_dssp             CCEEECCBCEEEEEEETTTTEEEEEEEESCTTC
T ss_pred             CCEEEecCCEEEEEEeCCCCcEEEEEEecCCCC
Confidence            468999999999999999999999999999975


No 49 
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Probab=99.38  E-value=5.9e-13  Score=80.80  Aligned_cols=32  Identities=31%  Similarity=0.507  Sum_probs=30.2

Q ss_pred             eEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          359 IDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       359 ~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ..|.+||||+|+|+|+.|+.|||+|+|.+|.+
T Consensus         3 ~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~   34 (35)
T 2xn6_B            3 PIIQIDRSFMLLILERSTRSILFLGKVVNPTE   34 (35)
T ss_dssp             CEEECCBCEEEEEEETTTTEEEEEEEESCTTC
T ss_pred             CEEEecCCEEEEEEECCCCcEEEEEEeCCcCC
Confidence            47999999999999999999999999999975


No 50 
>1hle_B Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=99.37  E-value=6.2e-13  Score=78.49  Aligned_cols=30  Identities=40%  Similarity=0.854  Sum_probs=28.6

Q ss_pred             eEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          359 IDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       359 ~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                      .+|++||||+|+|+|+.|+.|||+|+|.+|
T Consensus         2 ~~f~~drPFlf~I~~~~t~~iLF~G~v~~P   31 (31)
T 1hle_B            2 ENFNADHPFIFFIRHNPSANILFLGRFSSP   31 (31)
T ss_dssp             EEEECCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred             CEEEEeCCEEEEEEECCCCcEEEEEEecCC
Confidence            479999999999999999999999999998


No 51 
>4afx_B Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_B
Probab=99.37  E-value=6.6e-13  Score=81.07  Aligned_cols=32  Identities=41%  Similarity=0.756  Sum_probs=30.4

Q ss_pred             eEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          359 IDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       359 ~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ..|++||||+|+|+|+.|+.+||+|+|.+|.+
T Consensus         4 ~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~   35 (36)
T 4afx_B            4 PVIKIDRPFHFMIYEETSGMLLFLGRVVNPTL   35 (36)
T ss_dssp             CEEECCSCEEEEEEETTTTEEEEEEEESCTTC
T ss_pred             CEEEeeCCEEEEEEECCCCcEEEEEEecCCCC
Confidence            47999999999999999999999999999986


No 52 
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_B
Probab=99.36  E-value=8.1e-13  Score=79.77  Aligned_cols=32  Identities=34%  Similarity=0.768  Sum_probs=29.7

Q ss_pred             eEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          359 IDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       359 ~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      ..|.+||||+|+|+|+.|+.|||+|+|.+|..
T Consensus         3 ~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~   34 (34)
T 2h4p_B            3 LKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE   34 (34)
T ss_dssp             EEEECCSCEEEEEEETTTTEEEEEEEECSCC-
T ss_pred             CEEEecCCEEEEEEECCCCeEEEEEEeCCCCC
Confidence            57999999999999999999999999999973


No 53 
>1as4_B Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A {Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_B* 3caa_B 4caa_B
Probab=99.36  E-value=5.6e-13  Score=81.90  Aligned_cols=33  Identities=24%  Similarity=0.344  Sum_probs=31.0

Q ss_pred             CeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          358 KIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       358 ~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      +..|.+||||+|+|+|+.|+.|||+|+|.+|.+
T Consensus         4 p~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~   36 (37)
T 1as4_B            4 GTIVRFNRPFLMIIVPTDTQNIFFMSKVTNPKQ   36 (37)
T ss_dssp             CEEEECCSCEEEEEEETTSSCCSEEEEESCTTC
T ss_pred             CCEEEecCCEEEEEEeCCCCcEEEEEEeCCCCC
Confidence            468999999999999999999999999999975


No 54 
>1m93_C Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE inhibitor, viral protein; 1.65A {Cowpox virus} SCOP: e.1.1.1 PDB: 1c8o_B 1f0c_B
Probab=99.24  E-value=9.5e-12  Score=78.18  Aligned_cols=32  Identities=38%  Similarity=0.790  Sum_probs=29.2

Q ss_pred             CeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          358 KIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       358 ~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      +.+|++||||+|+|+|+. +.|||+|+|.+|.+
T Consensus         9 p~~f~~drPFlf~I~~~~-~~iLF~G~v~~P~~   40 (41)
T 1m93_C            9 TNEFSADHPFIYVIRHVD-GKILFVGRYSSPTT   40 (41)
T ss_dssp             CCEEECCSCEEEEEEETT-SCEEEEEEECSCC-
T ss_pred             CCEEEeeCCEEEEEEECC-CCEEEEEEeCCcCC
Confidence            468999999999999998 99999999999985


No 55 
>3f02_C Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 1jjo_E
Probab=99.24  E-value=1.3e-11  Score=80.25  Aligned_cols=33  Identities=39%  Similarity=0.832  Sum_probs=30.5

Q ss_pred             CeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          358 KIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       358 ~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      +..|++||||+|+|+|+.|+.|||+|+|.+|..
T Consensus         5 ~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P~~   37 (48)
T 3f02_C            5 YPQVIVDHPFFFLIRNRRTGTILFMGRVMHPET   37 (48)
T ss_dssp             CCEEECCSCEEEEEEETTTCCEEEEEEESCCCC
T ss_pred             CCEEEeeCCEEEEEEECCCCcEEEEEEeCCCCc
Confidence            358999999999999999999999999999963


No 56 
>1mtp_B Serine proteinase inhibitor (serpin), chain B; structural genomics, protease inhibitor; 1.50A {Thermobifida fusca} SCOP: e.1.1.1
Probab=99.18  E-value=2.9e-11  Score=76.57  Aligned_cols=31  Identities=32%  Similarity=0.765  Sum_probs=28.6

Q ss_pred             CeEEEeecCeeEEEEECCCCcEEEEEEecCCCC
Q 016311          358 KIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA  390 (391)
Q Consensus       358 ~~~f~~drPF~f~I~~~~t~~ilf~G~v~~P~~  390 (391)
                      +..|++||||+|+|+|+  +.|||+|+|.+|..
T Consensus         8 p~~f~~drPFlf~I~~~--~~iLF~G~v~~P~~   38 (43)
T 1mtp_B            8 TIRFSVDRPFHIVVRRR--GAILFLGSIADPHD   38 (43)
T ss_dssp             CEEEECCSCEEEEEEET--TEEEEEEEESSCCC
T ss_pred             CCEEEeeCCEEEEEEEC--CEEEEEEEeCCccc
Confidence            56899999999999998  89999999999974


No 57 
>3dy0_B C-terminus plasma serine protease inhibitor; serpin, blood clotting, hydrolase inhibitor; HET: IDS SGN; 1.55A {Homo sapiens} PDB: 1lq8_B*
Probab=99.10  E-value=8.9e-11  Score=67.77  Aligned_cols=27  Identities=30%  Similarity=0.671  Sum_probs=25.3

Q ss_pred             eEEEeecCeeEEEEECCCCcEEEEEEecCC
Q 016311          359 IDFVADHPFVFMIREDMTGLVMFTGHVLNP  388 (391)
Q Consensus       359 ~~f~~drPF~f~I~~~~t~~ilf~G~v~~P  388 (391)
                      ..|++||||+|+|+|+   ++||+|+|.+|
T Consensus         3 ~~f~~drPFlf~I~~~---~iLF~G~v~~P   29 (29)
T 3dy0_B            3 QRLVFNRPFLMFIVDN---NILFLGKVNRP   29 (29)
T ss_dssp             EEEECCSCEEEEEESS---SEEEEEEESCC
T ss_pred             CEEEecCCEEEEEEcC---ceEEEEEecCC
Confidence            4799999999999987   89999999998


Done!