Query 016315
Match_columns 391
No_of_seqs 199 out of 1166
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 05:44:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016315.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016315hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK00877 hisD bifunctional his 100.0 1E-125 3E-130 955.0 32.5 321 53-378 5-329 (425)
2 PLN02926 histidinol dehydrogen 100.0 4E-124 8E-129 945.5 33.9 330 47-378 1-332 (431)
3 PF00815 Histidinol_dh: Histid 100.0 4E-124 8E-129 942.3 24.5 311 64-378 2-315 (412)
4 COG0141 HisD Histidinol dehydr 100.0 8E-123 2E-127 930.0 29.2 308 65-378 12-325 (425)
5 TIGR00069 hisD histidinol dehy 100.0 2E-122 3E-127 925.2 29.8 295 80-378 1-298 (393)
6 PRK13770 histidinol dehydrogen 100.0 3E-122 6E-127 928.0 31.6 306 66-378 11-319 (416)
7 PRK12447 histidinol dehydrogen 100.0 6E-122 1E-126 928.6 31.2 306 67-378 14-324 (426)
8 cd06572 Histidinol_dh Histidin 100.0 3E-121 6E-126 916.7 30.0 298 77-378 2-302 (390)
9 PRK13769 histidinol dehydrogen 100.0 6E-105 1E-109 792.8 30.6 277 73-378 6-282 (368)
10 KOG2697 Histidinol dehydrogena 100.0 9.5E-99 2E-103 731.3 23.4 329 47-376 6-339 (446)
11 cd06534 ALDH-SF NAD(P)+-depend 94.9 0.89 1.9E-05 45.1 14.6 202 154-370 81-296 (367)
12 PRK09457 astD succinylglutamic 91.5 8.6 0.00019 40.4 16.1 135 156-306 125-269 (487)
13 TIGR03240 arg_catab_astD succi 90.2 27 0.00058 36.7 20.4 133 158-306 125-267 (484)
14 PRK00197 proA gamma-glutamyl p 90.0 15 0.00033 37.9 16.1 218 130-369 77-335 (417)
15 cd07088 ALDH_LactADH-AldA Esch 89.2 30 0.00065 35.9 20.2 168 156-339 124-303 (468)
16 PF00171 Aldedh: Aldehyde dehy 88.0 5.2 0.00011 41.4 11.1 238 71-339 48-296 (462)
17 cd07094 ALDH_F21_LactADH-like 87.6 37 0.00081 35.0 17.6 241 72-339 41-291 (453)
18 cd07078 ALDH NAD(P)+ dependent 87.5 35 0.00076 34.6 18.3 168 156-338 87-265 (432)
19 cd07102 ALDH_EDX86601 Uncharac 87.3 35 0.00075 35.2 16.6 170 155-339 106-285 (452)
20 cd07148 ALDH_RL0313 Uncharacte 87.0 36 0.00078 35.4 16.6 239 73-339 43-292 (455)
21 cd07150 ALDH_VaniDH_like Pseud 85.4 41 0.0009 34.6 16.0 165 155-339 109-289 (451)
22 cd07083 ALDH_P5CDH ALDH subfam 85.3 23 0.0005 37.4 14.3 169 156-339 145-330 (500)
23 cd07114 ALDH_DhaS Uncharacteri 85.2 48 0.001 34.3 16.4 166 155-339 109-289 (457)
24 cd07131 ALDH_AldH-CAJ73105 Unc 85.1 52 0.0011 34.3 17.5 168 156-339 126-305 (478)
25 cd07149 ALDH_y4uC Uncharacteri 84.7 46 0.001 34.2 15.9 168 156-339 114-291 (453)
26 cd07110 ALDH_F10_BADH Arabidop 84.7 43 0.00092 34.7 15.7 165 156-339 111-290 (456)
27 TIGR00407 proA gamma-glutamyl 84.6 12 0.00027 38.6 11.8 218 130-370 65-328 (398)
28 cd07077 ALDH-like NAD(P)+-depe 84.1 52 0.0011 33.5 17.4 159 130-304 66-233 (397)
29 TIGR03216 OH_muco_semi_DH 2-hy 84.1 59 0.0013 34.1 20.9 168 156-339 130-310 (481)
30 cd07082 ALDH_F11_NP-GAPDH NADP 83.1 62 0.0014 33.7 17.1 238 74-339 61-309 (473)
31 cd07147 ALDH_F21_RNP123 Aldehy 81.2 71 0.0015 33.0 15.8 167 156-339 114-290 (452)
32 cd07090 ALDH_F9_TMBADH NAD+-de 80.2 78 0.0017 32.8 17.1 166 156-339 107-285 (457)
33 cd07143 ALDH_AldA_AN0554 Asper 79.2 67 0.0014 33.9 15.0 164 156-339 135-315 (481)
34 cd07095 ALDH_SGSD_AstD N-succi 79.0 85 0.0018 32.6 16.6 136 156-304 88-230 (431)
35 cd07112 ALDH_GABALDH-PuuC Esch 78.7 80 0.0017 32.9 15.3 166 156-339 115-296 (462)
36 cd07092 ALDH_ABALDH-YdcW Esche 77.8 90 0.0019 32.2 15.9 192 130-339 81-287 (450)
37 cd07144 ALDH_ALD2-YMR170C Sacc 77.4 85 0.0018 32.9 15.1 166 155-337 134-312 (484)
38 PLN02278 succinic semialdehyde 77.2 1E+02 0.0023 32.6 17.8 160 159-339 154-330 (498)
39 cd07118 ALDH_SNDH Gluconobacte 76.9 99 0.0021 32.2 16.7 168 156-339 110-289 (454)
40 cd07103 ALDH_F5_SSADH_GabD Mit 76.2 99 0.0021 31.8 16.1 168 156-339 108-287 (451)
41 PRK09847 gamma-glutamyl-gamma- 75.6 1E+02 0.0022 32.6 15.2 168 156-339 148-329 (494)
42 cd07085 ALDH_F6_MMSDH Methylma 75.3 1.1E+02 0.0024 32.0 16.8 168 155-339 126-305 (478)
43 cd07097 ALDH_KGSADH-YcbD Bacil 75.1 1.1E+02 0.0024 31.9 19.1 169 155-339 125-305 (473)
44 cd07105 ALDH_SaliADH Salicylal 74.0 1E+02 0.0022 31.8 14.4 195 130-339 61-271 (432)
45 cd07109 ALDH_AAS00426 Uncharac 73.3 1.2E+02 0.0026 31.4 16.1 166 155-340 107-288 (454)
46 cd07119 ALDH_BADH-GbsA Bacillu 72.4 1.3E+02 0.0028 31.5 15.8 165 155-339 124-304 (482)
47 cd07089 ALDH_CddD-AldA-like Rh 72.4 1.1E+02 0.0024 31.8 14.4 240 72-339 40-293 (459)
48 PLN00412 NADP-dependent glycer 71.3 1.5E+02 0.0031 31.6 19.3 158 161-339 154-325 (496)
49 cd07084 ALDH_KGSADH-like ALDH 70.3 89 0.0019 32.6 13.1 134 158-305 93-233 (442)
50 TIGR01237 D1pyr5carbox2 delta- 70.3 1.2E+02 0.0027 32.2 14.3 169 155-339 157-343 (511)
51 cd07126 ALDH_F12_P5CDH Delta(1 69.1 1.7E+02 0.0036 31.4 16.6 162 125-304 98-272 (489)
52 cd07113 ALDH_PADH_NahF Escheri 69.0 1.6E+02 0.0034 31.0 16.1 161 157-339 134-311 (477)
53 cd07086 ALDH_F7_AASADH-like NA 66.7 1.7E+02 0.0037 30.7 16.8 167 156-339 124-306 (478)
54 cd07101 ALDH_SSADH2_GabD2 Myco 66.7 1.7E+02 0.0036 30.5 19.5 159 158-339 111-286 (454)
55 cd07079 ALDH_F18-19_ProA-GPR G 66.5 1.2E+02 0.0027 31.2 13.1 220 129-369 70-329 (406)
56 cd07138 ALDH_CddD_SSP0762 Rhod 65.9 1.7E+02 0.0038 30.4 14.4 162 161-339 126-300 (466)
57 cd07146 ALDH_PhpJ Streptomyces 65.2 1.8E+02 0.0039 30.3 16.5 167 156-339 111-288 (451)
58 cd07145 ALDH_LactADH_F420-Bios 64.4 1.8E+02 0.004 30.1 14.9 162 158-339 116-293 (456)
59 cd07139 ALDH_AldA-Rv0768 Mycob 62.9 2E+02 0.0043 30.0 15.3 168 156-339 128-306 (471)
60 cd07125 ALDH_PutA-P5CDH Delta( 62.5 2.2E+02 0.0047 30.4 17.7 171 156-339 158-340 (518)
61 PRK11904 bifunctional proline 61.7 3.3E+02 0.0072 32.2 16.9 170 156-339 675-857 (1038)
62 cd07141 ALDH_F1AB_F2_RALDH1 NA 61.6 2.1E+02 0.0047 30.0 17.7 167 157-339 137-316 (481)
63 PRK01433 hscA chaperone protei 61.2 13 0.00028 40.6 5.1 48 196-244 141-188 (595)
64 cd07093 ALDH_F8_HMSADH Human a 59.2 2.2E+02 0.0048 29.4 21.5 165 155-339 107-287 (455)
65 TIGR02350 prok_dnaK chaperone 58.8 17 0.00036 39.1 5.4 48 196-244 130-177 (595)
66 cd07152 ALDH_BenzADH NAD-depen 57.7 2.3E+02 0.0051 29.2 17.6 164 155-339 100-280 (443)
67 PRK11905 bifunctional proline 57.3 2.2E+02 0.0047 34.3 14.3 166 161-339 672-849 (1208)
68 PLN02467 betaine aldehyde dehy 56.6 2.8E+02 0.006 29.7 14.6 164 159-339 145-321 (503)
69 cd07115 ALDH_HMSADH_HapE Pseud 55.7 2.6E+02 0.0056 29.0 14.7 165 155-339 107-287 (453)
70 PRK13411 molecular chaperone D 54.0 27 0.0006 38.3 6.2 48 196-244 133-180 (653)
71 cd07124 ALDH_PutA-P5CDH-RocA D 52.2 3.2E+02 0.0069 29.1 16.9 170 156-339 157-342 (512)
72 PRK13410 molecular chaperone D 52.0 24 0.00053 39.0 5.4 48 196-244 135-182 (668)
73 cd07151 ALDH_HBenzADH NADP+-de 51.9 3E+02 0.0066 28.7 16.5 164 155-339 120-301 (465)
74 TIGR01780 SSADH succinate-semi 51.2 3E+02 0.0066 28.5 15.8 167 156-339 108-288 (448)
75 cd07104 ALDH_BenzADH-like ALDH 50.4 2.9E+02 0.0064 28.2 20.5 168 155-339 88-269 (431)
76 PRK09406 gabD1 succinic semial 50.2 3.3E+02 0.0071 28.6 17.2 239 72-339 43-292 (457)
77 PRK13929 rod-share determining 50.1 37 0.00081 33.8 5.9 72 197-291 99-170 (335)
78 COG1077 MreB Actin-like ATPase 49.7 15 0.00033 37.9 3.1 83 198-305 103-190 (342)
79 PLN02419 methylmalonate-semial 49.5 4.1E+02 0.0088 29.5 15.8 135 156-303 240-380 (604)
80 PTZ00400 DnaK-type molecular c 49.0 31 0.00066 38.1 5.5 48 196-244 174-221 (663)
81 TIGR01238 D1pyr5carbox3 delta- 48.5 3.7E+02 0.008 28.7 14.0 182 130-339 135-333 (500)
82 PLN03184 chloroplast Hsp70; Pr 48.3 30 0.00065 38.3 5.4 48 196-244 172-219 (673)
83 PTZ00381 aldehyde dehydrogenas 46.5 1.3E+02 0.0029 32.0 9.6 199 72-305 27-240 (493)
84 PLN02174 aldehyde dehydrogenas 46.5 4E+02 0.0087 28.6 19.6 232 72-339 30-280 (484)
85 CHL00094 dnaK heat shock prote 45.8 18 0.00039 39.3 3.2 48 196-244 135-182 (621)
86 PF00012 HSP70: Hsp70 protein; 45.3 19 0.00041 38.0 3.2 51 196-247 135-185 (602)
87 PRK00290 dnaK molecular chaper 44.8 36 0.00078 37.0 5.3 48 196-244 133-180 (627)
88 PF10609 ParA: ParA/MinD ATPas 43.1 11 0.00024 31.3 0.9 44 274-333 4-47 (81)
89 cd07091 ALDH_F1-2_Ald2-like AL 42.6 4.2E+02 0.0091 27.7 15.2 165 155-339 131-312 (476)
90 PRK11809 putA trifunctional tr 42.5 6.7E+02 0.014 30.7 15.3 185 130-339 743-944 (1318)
91 PTZ00009 heat shock 70 kDa pro 42.2 19 0.00041 39.5 2.7 48 196-244 140-187 (653)
92 cd07100 ALDH_SSADH1_GabD1 Myco 40.7 4.3E+02 0.0093 27.3 16.1 165 159-339 90-265 (429)
93 cd07123 ALDH_F4-17_P5CDH Delta 40.1 5E+02 0.011 27.8 16.0 167 156-339 160-345 (522)
94 PF06723 MreB_Mbl: MreB/Mbl pr 39.4 34 0.00074 34.8 3.8 74 196-292 93-166 (326)
95 cd07133 ALDH_CALDH_CalB Conife 37.8 4.9E+02 0.011 27.1 15.9 237 73-337 19-266 (434)
96 PRK13927 rod shape-determining 36.7 98 0.0021 30.4 6.5 71 198-291 98-168 (334)
97 PTZ00186 heat shock 70 kDa pre 36.4 30 0.00065 38.3 3.1 49 196-245 160-208 (657)
98 TIGR01991 HscA Fe-S protein as 36.1 30 0.00066 37.6 3.0 49 196-245 129-177 (599)
99 cd06572 Histidinol_dh Histidin 34.8 27 0.00059 36.7 2.4 177 166-358 123-323 (390)
100 PRK02399 hypothetical protein; 33.9 58 0.0013 34.6 4.5 88 175-267 104-208 (406)
101 cd07142 ALDH_F2BC Arabidosis a 32.8 6E+02 0.013 26.7 20.2 160 158-338 134-311 (476)
102 PRK13968 putative succinate se 32.7 6.1E+02 0.013 26.7 20.1 163 158-339 119-295 (462)
103 cd07106 ALDH_AldA-AAD23400 Str 32.1 5.9E+02 0.013 26.3 22.7 192 129-339 79-282 (446)
104 cd07087 ALDH_F3-13-14_CALDH-li 31.2 6.1E+02 0.013 26.2 14.2 159 128-303 65-229 (426)
105 cd07136 ALDH_YwdH-P39616 Bacil 31.2 6.5E+02 0.014 26.5 15.5 188 126-339 63-267 (449)
106 PRK13928 rod shape-determining 30.8 1.3E+02 0.0028 29.8 6.3 73 197-292 96-168 (336)
107 cd07107 ALDH_PhdK-like Nocardi 30.5 6.4E+02 0.014 26.2 16.6 168 156-339 107-286 (456)
108 PRK05183 hscA chaperone protei 30.4 43 0.00092 36.6 3.0 48 196-244 149-196 (616)
109 PF04122 CW_binding_2: Putativ 30.2 38 0.00082 27.3 2.0 34 200-237 53-86 (92)
110 PLN02466 aldehyde dehydrogenas 29.9 7.4E+02 0.016 26.8 15.0 159 158-336 188-363 (538)
111 cd07120 ALDH_PsfA-ACA09737 Pse 29.3 6.9E+02 0.015 26.2 15.6 165 155-339 107-288 (455)
112 PRK13473 gamma-aminobutyraldeh 28.9 6.9E+02 0.015 26.1 17.2 164 156-339 129-307 (475)
113 PF09824 ArsR: ArsR transcript 28.3 75 0.0016 29.8 3.8 46 58-104 88-133 (160)
114 PRK11678 putative chaperone; P 27.7 1.6E+02 0.0034 31.2 6.6 48 196-244 149-204 (450)
115 cd07080 ALDH_Acyl-CoA-Red_LuxC 27.2 7.3E+02 0.016 25.8 15.4 166 161-341 108-296 (422)
116 PRK03137 1-pyrroline-5-carboxy 27.2 7.8E+02 0.017 26.2 18.3 170 155-339 161-347 (514)
117 TIGR00904 mreB cell shape dete 27.2 1.4E+02 0.0031 29.4 5.8 71 198-291 100-170 (333)
118 PF07788 DUF1626: Protein of u 26.7 66 0.0014 26.2 2.8 29 192-225 40-70 (70)
119 cd07130 ALDH_F7_AASADH NAD+-de 26.3 7.8E+02 0.017 25.9 11.8 156 160-339 127-305 (474)
120 PRK13930 rod shape-determining 26.2 1.6E+02 0.0036 28.7 6.0 56 214-292 118-173 (335)
121 PF04895 DUF651: Archaeal prot 25.4 29 0.00063 30.5 0.6 43 342-385 56-98 (110)
122 cd06167 LabA_like LabA_like pr 24.9 99 0.0021 26.5 3.8 33 296-329 85-117 (149)
123 TIGR01804 BADH glycine betaine 24.5 8.2E+02 0.018 25.5 16.0 161 159-339 127-303 (467)
124 cd07099 ALDH_DDALDH Methylomon 23.1 8.4E+02 0.018 25.2 21.5 169 156-339 110-287 (453)
125 PRK13252 betaine aldehyde dehy 23.0 9E+02 0.02 25.4 23.5 164 156-339 133-311 (488)
126 PF10792 DUF2605: Protein of u 22.7 44 0.00096 29.0 1.2 20 259-278 56-75 (98)
127 cd00105 KH-I K homology RNA-bi 22.6 1.9E+02 0.0041 21.0 4.5 29 247-280 9-37 (64)
128 cd00615 Orn_deC_like Ornithine 22.5 7E+02 0.015 24.0 9.8 56 208-265 58-115 (294)
129 PF13607 Succ_CoA_lig: Succiny 22.5 2.8E+02 0.0061 24.7 6.3 69 299-368 42-136 (138)
130 PF07126 DUF1379: Protein of u 22.4 88 0.0019 28.9 3.1 35 122-156 49-83 (153)
131 PRK15364 pathogenicity island 22.0 2E+02 0.0044 27.7 5.4 60 72-137 73-147 (196)
132 KOG3022 Predicted ATPase, nucl 21.7 68 0.0015 32.8 2.4 81 237-333 119-204 (300)
133 PF03433 EspA: EspA-like secre 21.1 32 0.00069 32.9 0.0 61 72-138 73-147 (188)
134 TIGR01092 P5CS delta l-pyrroli 20.5 1.7E+02 0.0036 32.9 5.3 155 130-304 359-527 (715)
135 KOG0101 Molecular chaperones H 20.3 76 0.0016 35.4 2.6 73 160-243 115-189 (620)
136 PF03807 F420_oxidored: NADP o 20.2 2.3E+02 0.0051 22.2 4.8 69 252-332 4-81 (96)
No 1
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=100.00 E-value=1.5e-125 Score=955.02 Aligned_cols=321 Identities=45% Similarity=0.673 Sum_probs=305.0
Q ss_pred EcCCCCHHHHHHHhcCCC-CChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHH
Q 016315 53 RLSELTHAEVQSLKARPR-IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEA 129 (391)
Q Consensus 53 ~~~~~~~~~~~~~l~R~~-~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~~A 129 (391)
++......++...+.|+. .+.+++.+.|++||++||++||+||++||+|||++++++|+||++||++| .+|+++++|
T Consensus 5 ~~~~~~~~~~~~~l~r~~~~~~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs~~ei~~A~~~v~~~~~~a 84 (425)
T PRK00877 5 RWLSLSDAEFRAALPRRAREDDEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVSEEEIEAAYERLDPELREA 84 (425)
T ss_pred eccccChHHHHHHhcCccccchHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHhcCCHHHHHH
Confidence 333445556666666655 45778999999999999999999999999999999988999999999998 899999999
Q ss_pred HHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCC
Q 016315 130 FDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDG 209 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G 209 (391)
|+.|++||++||++|+|++|..+..+|+++||+|+||+|||||||||+|+|||||||++||||||||++|||||||. +|
T Consensus 85 i~~A~~~I~~Fh~~q~~~~~~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~-~g 163 (425)
T PRK00877 85 LEEAAENIRAFHEAQKPESWDVETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPP-DG 163 (425)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCC-CC
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999999997 99
Q ss_pred CCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEe
Q 016315 210 SICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIA 289 (391)
Q Consensus 210 ~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIA 289 (391)
++||.+|+||++|||++||++|||||||||||||||||||||||||||+|||+|||++++ .|||||+|||||++|||
T Consensus 164 ~i~p~vL~AA~~~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViA 240 (425)
T PRK00877 164 EINPAILAAAALAGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFG---VVGIDMIAGPSEILVIA 240 (425)
T ss_pred CCCHHHHHHHHHcCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcC---CcCcCCCCCCceeEEEe
Confidence 999999999999999999999999999999999999999999999999999999998754 49999999999999999
Q ss_pred cCCCCHHHHHHHHHhhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhhC-CeEEEECCHHHHHhccc
Q 016315 290 DIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGH-SFMVFARDMLEVSQEFP 368 (391)
Q Consensus 290 D~tAnP~~VAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~~-g~iivv~sleeAi~~an 368 (391)
|++|||+|||+||||||||||+|++||||||++|+ ++|.++|++||+.|||++|+++||++ |.+++|+|+|||++++|
T Consensus 241 D~~Anp~~vAaDLLaQAEHd~~a~aiLvT~s~~la-~~V~~~v~~ql~~l~r~~ia~~sl~~~g~iivv~~leeai~~~N 319 (425)
T PRK00877 241 DETADPDFVAADLLSQAEHDPDAQSILVTTSEELA-EAVAAEVERQLATLPRAEIARASLEGQGAIILVDDLEEAIELSN 319 (425)
T ss_pred CCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999985 99999999999999999
Q ss_pred hhhhcccccc
Q 016315 369 SFVLSNLDEV 378 (391)
Q Consensus 369 ~~~~~~l~~~ 378 (391)
++|||||+-.
T Consensus 320 ~~APEHLel~ 329 (425)
T PRK00877 320 AYAPEHLEIQ 329 (425)
T ss_pred hhChHheeeh
Confidence 9999999854
No 2
>PLN02926 histidinol dehydrogenase
Probab=100.00 E-value=3.7e-124 Score=945.49 Aligned_cols=330 Identities=78% Similarity=1.154 Sum_probs=315.5
Q ss_pred eeeEEEEcCCCCHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC-CCCHH
Q 016315 47 CSMKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP-ELDAA 125 (391)
Q Consensus 47 ~~m~i~~~~~~~~~~~~~~l~R~~~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A-~l~~~ 125 (391)
|.|+.++|...+.+++.+++.|+..+..++.+.|++||++||++||+||++||+|||++++++|+||++|+ +. .+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~~fD~~~~~~l~v~~~e~-A~~~l~~~ 79 (431)
T PLN02926 1 CSMKSYRLSELSASEVDSLKARPRIDFSSILETVNPIVENVRSRGDAAVKEYTSKFDKVALDSVVERVSDL-PDPVLDAD 79 (431)
T ss_pred CCceEeecccCCHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCcccceeCHHHH-HHhcCCHH
Confidence 78999999999988888889987656778999999999999999999999999999999888899999999 33 99999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCc-eEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcC
Q 016315 126 VKEAFDVAYNNIYAFHLAQKSAET-SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATP 204 (391)
Q Consensus 126 ~~~Ai~~A~~nI~~FH~~Q~~~~~-~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TP 204 (391)
+++||+.|++||++||++|+|++| .++..+|+++||+|+||+|||||||||+|||||||||++||||||||+|||||||
T Consensus 80 ~~~ai~~A~~nI~~fh~~q~~~~~~~~~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TP 159 (431)
T PLN02926 80 VKEAFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATP 159 (431)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcceEecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEEC
Confidence 999999999999999999999888 7766899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcE
Q 016315 205 PSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSE 284 (391)
Q Consensus 205 P~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSE 284 (391)
|++||++||.+|+||++|||||||++|||||||||||||||||||||||||||+||++|||++++.+|.|||||+|||||
T Consensus 160 p~~~g~i~p~iL~AA~~~Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~~~~VgID~~AGPSE 239 (431)
T PLN02926 160 PRKDGSICPEVLYCAKKAGVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSE 239 (431)
T ss_pred CCcCCCCCHHHHHHHHHcCCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCCCCccccCCCCCCce
Confidence 98789999999999999999999999999999999999999999999999999999999998765233399999999999
Q ss_pred EEEEecCCCCHHHHHHHHHhhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhhCCeEEEECCHHHHH
Q 016315 285 VLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEVS 364 (391)
Q Consensus 285 vlVIAD~tAnP~~VAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~~g~iivv~sleeAi 364 (391)
|+||||++|||+|||+||||||||||+|++||||+|++|+ ++|.++|++||++|||++++++||++|.+++|+|+|||+
T Consensus 240 vlIiAD~tA~p~~vAaDLLaQAEHdp~a~aiLvT~s~~la-~~V~~~v~~ql~~l~r~~i~~~sl~~g~iivv~~l~ea~ 318 (431)
T PLN02926 240 VLVIADKTANPVHVAADLLSQAEHGPDSQVVLVAVGDVDL-DAIEEEVEKQCQSLPRGEIASKALGHSFIVVARDMAEAI 318 (431)
T ss_pred eEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hccchhhhcccccc
Q 016315 365 QEFPSFVLSNLDEV 378 (391)
Q Consensus 365 ~~an~~~~~~l~~~ 378 (391)
+++|++|||||+-.
T Consensus 319 ~~~N~~APEHLei~ 332 (431)
T PLN02926 319 SFSNLYAPEHLIVN 332 (431)
T ss_pred HHHHhhChHhheeh
Confidence 99999999999854
No 3
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=100.00 E-value=3.9e-124 Score=942.27 Aligned_cols=311 Identities=45% Similarity=0.678 Sum_probs=245.7
Q ss_pred HHhcCCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHH
Q 016315 64 SLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFH 141 (391)
Q Consensus 64 ~~l~R~~~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~~Ai~~A~~nI~~FH 141 (391)
+++.|+..+.+++.+.|++||++||++||+||++||+|||++++++|+||++|+++| .+|+++++||+.|++||++||
T Consensus 2 ~ll~R~~~~~~~v~~~V~~Il~dVr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~l~~~~~~Ai~~A~~~I~~fh 81 (412)
T PF00815_consen 2 KLLKRSALDDSEVEETVREILEDVRERGDKALLEYTKKFDGVELESLRVSEEEIAAAYAKLDPELREAIEQAAENIRAFH 81 (412)
T ss_dssp HHT--------HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS--SSSB--HHHHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred chhcCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCccccEecHHHHHhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 567888788889999999999999999999999999999999999999999999998 899999999999999999999
Q ss_pred HhccCC-CceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHH
Q 016315 142 LAQKSA-ETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAK 220 (391)
Q Consensus 142 ~~Q~~~-~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~ 220 (391)
++|+|. +|.++..+|+++||||+||+|||||||||+||||||+||++||||||||++|||||||++||++||.+|+||+
T Consensus 82 ~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~ 161 (412)
T PF00815_consen 82 EAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAH 161 (412)
T ss_dssp HTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHH
T ss_pred HHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHH
Confidence 999975 6788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHH
Q 016315 221 KAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 300 (391)
Q Consensus 221 laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAa 300 (391)
+||++|||++|||||||||||||||||||||||||||.|||+|||++++ .|||||+||||||+||||++|||+|||+
T Consensus 162 ~~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEv~ViAD~~A~p~~vAa 238 (412)
T PF00815_consen 162 LAGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG---DVGIDMIAGPSEVLVIADETANPEFVAA 238 (412)
T ss_dssp HTT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH---S-EES------EEEEEE-TTS-HHHHHH
T ss_pred HcCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC---CcccCCCCCCCceEEEECCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999998754 3999999999999999999999999999
Q ss_pred HHHhhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhhCCeEEEECCHHHHHhccchhhhcccccc
Q 016315 301 DLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEVSQEFPSFVLSNLDEV 378 (391)
Q Consensus 301 DLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~~g~iivv~sleeAi~~an~~~~~~l~~~ 378 (391)
||||||||||+|++||||+|++|+ ++|.++|++||++|||++|+++||++|.+++|+|++||++++|++|||||+-.
T Consensus 239 DLLaQAEHd~~a~~vLvt~s~~la-~~V~~~v~~~l~~l~r~~i~~~sl~~g~ii~~~~l~ea~~~~N~~APEHLel~ 315 (412)
T PF00815_consen 239 DLLAQAEHDPDAQAVLVTTSEELA-EAVEAEVERQLEELPRREIAEKSLENGAIIVVDSLEEAIELANEYAPEHLELQ 315 (412)
T ss_dssp HHHHHHTT-TT-EEEEEES-HHHH-HHHHHHHHHHHTT-TTHHHHHHHHTT-EEEE-SSHHHHHHHHHHH--SEEEEE
T ss_pred HHHHHhccCCCCceEEEECCHHHH-HHHHHHHHHHHHhCCchHHHHHHHHCCeEEEECCHHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999999999854
No 4
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-123 Score=929.98 Aligned_cols=308 Identities=46% Similarity=0.704 Sum_probs=295.3
Q ss_pred HhcCCCCC---hhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHH
Q 016315 65 LKARPRID---FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYA 139 (391)
Q Consensus 65 ~l~R~~~~---~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~~Ai~~A~~nI~~ 139 (391)
.+.|+... ..++ +.|++||++||.+||+||++||+|||++++++++||++||++| .+|+++++||+.|++|||+
T Consensus 12 ~l~r~~~~~~~~~~~-~~V~~Ii~~Vk~~GD~Al~eyt~~FD~~~~~~l~Vs~~ei~aA~~~v~~~~~eai~~A~~~I~~ 90 (425)
T COG0141 12 ALLRPRRSVEEVIEV-RTVRPIIEDVKERGDAALLEYTAKFDGVEPDNLRVSAAEIDAAYQRLDPEVKEALEVAAENIEA 90 (425)
T ss_pred hhcccccccccccch-hhHHHHHHHHHHhHHHHHHHHHHHccCCCccccccCHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 45554333 3344 7899999999999999999999999999999999999999999 8999999999999999999
Q ss_pred HHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHH
Q 016315 140 FHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCA 219 (391)
Q Consensus 140 FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA 219 (391)
||++|+|++|..++.+|+.|||+|+||+|||||||||+|+|||||||++||||||||++|||||||.+|| +||++|+||
T Consensus 91 fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA 169 (425)
T COG0141 91 FHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAA 169 (425)
T ss_pred HHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHH
Q 016315 220 KKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 299 (391)
Q Consensus 220 ~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VA 299 (391)
++|||++||++|||||||||||||||||||||||||||+|||+|||++++ .|+|||+|||||||||||++|||+|||
T Consensus 170 ~~~Gv~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g---~V~ID~~AGPSEvlViAD~ta~p~~vA 246 (425)
T COG0141 170 RLAGVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG---VVGIDMIAGPSEVLVIADETANPDFVA 246 (425)
T ss_pred HHhCcHHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC---CcccCCCCCCceEEEEeCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999998754 499999999999999999999999999
Q ss_pred HHHHhhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhh-CCeEEEECCHHHHHhccchhhhcccccc
Q 016315 300 ADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEVSQEFPSFVLSNLDEV 378 (391)
Q Consensus 300 aDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~-~g~iivv~sleeAi~~an~~~~~~l~~~ 378 (391)
+||||||||||+|++||||+|++|+ ++|.++|++||+.|||++|+++||+ +|.||+|+|++||++++|+++||||+-.
T Consensus 247 ~DLLsQAEHd~~a~aiLvT~s~~la-~~v~~~v~~~l~~l~~~ei~~~~l~~~g~iilv~~l~ea~~~~N~~APEHLei~ 325 (425)
T COG0141 247 ADLLSQAEHDPDAQAILVTDSEELA-EAVEAAVERQLETLPRAEIARKALENYGAIILVDDLDEAVEISNEYAPEHLELQ 325 (425)
T ss_pred HHHHHHhhcCCCceEEEEeCcHHHH-HHHHHHHHHHHHhccHHHHHHHHHHhCCeEEEECCHHHHHHHHHhhChHhhhhh
Confidence 9999999999999999999999999 9999999999999999999999996 7999999999999999999999999743
No 5
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=100.00 E-value=1.5e-122 Score=925.22 Aligned_cols=295 Identities=47% Similarity=0.724 Sum_probs=288.1
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCceEEecCce
Q 016315 80 VHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGV 157 (391)
Q Consensus 80 V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~~~~~Gv 157 (391)
|++||++||++||+||++||+|||++++++|+||++|+++| .+|+++++||+.|++||++||++|+|++|..+..+|+
T Consensus 1 V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~l~vs~~ei~~A~~~~~~~~~~ai~~A~~~I~~fh~~q~~~~~~~~~~~Gv 80 (393)
T TIGR00069 1 VKDIIEDVRARGDEALLEYTEKFDGVTLDSLRVSEEEIEAAYAAVDPELKEALELAAENIRAFHEAQLPRSWEVETEPGV 80 (393)
T ss_pred CHHHHHHHHHhHHHHHHHHHHHhcCCCccccccCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCe
Confidence 68999999999999999999999999888999999999998 8999999999999999999999999999999889999
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHH
Q 016315 158 RCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAIS 237 (391)
Q Consensus 158 ~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIA 237 (391)
++||+|+||+|||||||||+|+|||||||++||||||||++|||||||.+||++||.+|+||++|||||||++|||||||
T Consensus 81 ~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~eIy~vGGAQAIA 160 (393)
T TIGR00069 81 ILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAAKLAGVDEVYKVGGAQAIA 160 (393)
T ss_pred EEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHHHHcCCCeehhcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred HHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCCCceEEE
Q 016315 238 AMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLV 317 (391)
Q Consensus 238 AlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~a~aiLv 317 (391)
||||||||||||||||||||+|||+|||++++ .|||||+|||||++||||++|||+|||+||||||||||+|++|||
T Consensus 161 AlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~a~~iLv 237 (393)
T TIGR00069 161 ALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG---DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPDAQAILV 237 (393)
T ss_pred HHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC---ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEE
Confidence 99999999999999999999999999998754 499999999999999999999999999999999999999999999
Q ss_pred ecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhh-CCeEEEECCHHHHHhccchhhhcccccc
Q 016315 318 IVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEVSQEFPSFVLSNLDEV 378 (391)
Q Consensus 318 T~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~-~g~iivv~sleeAi~~an~~~~~~l~~~ 378 (391)
|+|++|+ ++|.++|++||++|||++|+++||+ +|.+++|+|+|||++++|++|||||+-.
T Consensus 238 T~s~~la-~~V~~~v~~ql~~l~r~~i~~~al~~~g~ii~v~~l~ea~~~~N~~APEHLel~ 298 (393)
T TIGR00069 238 TTSEELA-EAVQEEIERQLATLPRREIARKSLEDNGAIILVDDLEEAIEISNDYAPEHLELQ 298 (393)
T ss_pred ECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHhheeh
Confidence 9999999 9999999999999999999999998 5999999999999999999999999854
No 6
>PRK13770 histidinol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-122 Score=927.96 Aligned_cols=306 Identities=30% Similarity=0.494 Sum_probs=293.1
Q ss_pred hcCCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHh
Q 016315 66 KARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLA 143 (391)
Q Consensus 66 l~R~~~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~~Ai~~A~~nI~~FH~~ 143 (391)
+.++...+.++.+.|++||++||++||+||++||+|||++++++|+||++|+++| .+|+++++||+.|++||++||++
T Consensus 11 ~~~~~~~~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~ 90 (416)
T PRK13770 11 FSLEAPLDESLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQES 90 (416)
T ss_pred hccccccchhHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3444456788999999999999999999999999999999988999999999999 89999999999999999999999
Q ss_pred ccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcC
Q 016315 144 QKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAG 223 (391)
Q Consensus 144 Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laG 223 (391)
|+|++|.. .+|+++||+|+||+|||||||||+|||||||||++||||||||++|||||||.+ |.+||.+|+||++||
T Consensus 91 q~~~~~~~--~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~-~~i~p~iL~Aa~~~G 167 (416)
T PRK13770 91 IKQTNQQL--EESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQP-NGVSQEVLAACYITQ 167 (416)
T ss_pred hCCCCeEe--cCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCC-CCCCHHHHHHHHHcC
Confidence 99999988 689999999999999999999999999999999999999999999999999954 459999999999999
Q ss_pred CcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHH
Q 016315 224 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 224 v~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLL 303 (391)
|+|||++|||||||||||||||||||||||||||+|||+|||++++ .|||||+||||||+||||++|||+|||+|||
T Consensus 168 v~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~~Anp~~iAaDLL 244 (416)
T PRK13770 168 VNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG---QVGIDQIAGPTEIALIIDETADLDAIVYDVF 244 (416)
T ss_pred CCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC---CcCcCCCCCCceeEEEecCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997654 3999999999999999999999999999999
Q ss_pred hhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhh-CCeEEEECCHHHHHhccchhhhcccccc
Q 016315 304 SQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEVSQEFPSFVLSNLDEV 378 (391)
Q Consensus 304 aQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~-~g~iivv~sleeAi~~an~~~~~~l~~~ 378 (391)
|||||||+|++||||+|++++ ++|.++|++||++|||++|+++||+ +|.+++|+|+|||++++|++|||||+-.
T Consensus 245 aQAEHd~~a~~iLvT~s~~la-~~V~~ev~~ql~~lpr~~i~~~al~~~g~ii~v~~~eeai~~~N~~APEHLel~ 319 (416)
T PRK13770 245 AQAEHDELARTYVISEDAQVL-KDLESRIAKALPNVDRYDIVSKSIANQHYLIHASNFDEACHVMNTIAPEHASIQ 319 (416)
T ss_pred HHhccCCCCcEEEEeCCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHhheeh
Confidence 999999999999999999998 9999999999999999999999998 5999999999999999999999999853
No 7
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=100.00 E-value=5.5e-122 Score=928.63 Aligned_cols=306 Identities=34% Similarity=0.509 Sum_probs=292.8
Q ss_pred cCCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhc
Q 016315 67 ARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLAQ 144 (391)
Q Consensus 67 ~R~~~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~~Ai~~A~~nI~~FH~~Q 144 (391)
.|...+ .++++.|++||++||++||+||++||+|||++++++|+||++||++| .+|+++++||+.|++||++||++|
T Consensus 14 ~~~~~d-~~~~~~V~~Il~~Vr~~GD~Al~~yt~~fD~~~~~~l~Vs~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~q 92 (426)
T PRK12447 14 KRAETD-SKVRETVEAILADIEARGDAAVREYSRKFDKWSPGSFRLSAAEIDAAVAKVPEQVKEDIRFAQDQVRRFAEAQ 92 (426)
T ss_pred ccccch-hhHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 444334 77999999999999999999999999999999888899999999999 899999999999999999999999
Q ss_pred cCCC--ceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHc
Q 016315 145 KSAE--TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKA 222 (391)
Q Consensus 145 ~~~~--~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~la 222 (391)
++++ |..+..+|+++||+|+||+|||||||||+|||||||||++||||||||++|||||||.++| +||.+|+||++|
T Consensus 93 ~~~~~~~~~~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~ 171 (426)
T PRK12447 93 RDSLQDLEVETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGE-PPPAIVAAMHLA 171 (426)
T ss_pred cCCCCceEEecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHc
Confidence 9965 9987789999999999999999999999999999999999999999999999999996544 999999999999
Q ss_pred CCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHH
Q 016315 223 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 302 (391)
Q Consensus 223 Gv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDL 302 (391)
||+|||++|||||||||||||||||||||||||||+|||+|||++++ .|+|||+||||||+||||++|||+|||+||
T Consensus 172 Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~~Anp~~vAaDL 248 (426)
T PRK12447 172 GADEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG---RVGIDLFAGPTETLVIADDTADPELVATDL 248 (426)
T ss_pred CCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC---ccCcCCCCCCceeEEEeCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999997754 399999999999999999999999999999
Q ss_pred HhhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhh-CCeEEEECCHHHHHhccchhhhcccccc
Q 016315 303 LSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEVSQEFPSFVLSNLDEV 378 (391)
Q Consensus 303 LaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~-~g~iivv~sleeAi~~an~~~~~~l~~~ 378 (391)
||||||||+|++||||||++++ ++|.++|++||+.|||++++++||+ +|.+++|+|++||++++|++|||||+-.
T Consensus 249 LaQAEHd~~a~~iLvT~s~~la-~~V~~~v~~ql~~l~r~~i~~~sl~~~g~ii~v~~l~ea~~~~N~~APEHLel~ 324 (426)
T PRK12447 249 LGQAEHGPNSPAVLITTSRKLA-EEVLAEIERLLAILPTADVASAAWRDYGEVILCDDLEEMVAEADRYASEHVQVM 324 (426)
T ss_pred HHHhccCCCCceEEEECCHHHH-HHHHHHHHHHHHhCCHHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHheeeh
Confidence 9999999999999999999998 9999999999999999999999998 4999999999999999999999999854
No 8
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=100.00 E-value=2.9e-121 Score=916.70 Aligned_cols=298 Identities=48% Similarity=0.721 Sum_probs=291.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCceEEec
Q 016315 77 FSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENM 154 (391)
Q Consensus 77 ~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~~~~ 154 (391)
++.|++||++||++||+||++||+|||++++++|+||++|+++| .+|+++++||+.|++||++||++|+|++|.++..
T Consensus 2 ~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~vs~~ei~~A~~~~~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~~ 81 (390)
T cd06572 2 EETVREIIEDVRERGDEALLEYTEKFDGVELESLRVSEEEIDAAYAAVDPELKEAIELAAENIRAFHEAQLPKDWEVETE 81 (390)
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHhcCCCccccccCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 57899999999999999999999999999999999999999999 8999999999999999999999999999999988
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHH
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQ 234 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQ 234 (391)
+|+++||+|+||+|||||||||+|+|||||||++||||||||++|||||||++||++||.+|+||++||++|||++||||
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~eiy~vGGaQ 161 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDEIYKVGGAQ 161 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcEEeccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCCCce
Q 016315 235 AISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQV 314 (391)
Q Consensus 235 AIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~a~a 314 (391)
|||||||||||||||||||||||+||++|||++++ .|+|||+|||||++||||++|||+|||+||||||||||+|++
T Consensus 162 AIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~a~a 238 (390)
T cd06572 162 AIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSG---DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPDSQA 238 (390)
T ss_pred HHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcC---CcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCCCCeE
Confidence 99999999999999999999999999999998755 399999999999999999999999999999999999999999
Q ss_pred EEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhh-CCeEEEECCHHHHHhccchhhhcccccc
Q 016315 315 VLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEVSQEFPSFVLSNLDEV 378 (391)
Q Consensus 315 iLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~-~g~iivv~sleeAi~~an~~~~~~l~~~ 378 (391)
||||||++|+ ++|.++|++||+.|||++++++||. +|.+++|+|++||++++|++|||||+-.
T Consensus 239 iLvT~s~~la-~~V~~~v~~ql~~l~r~~~~~~~~~~~g~ii~~~~~~eai~~~N~~APEHLel~ 302 (390)
T cd06572 239 ILVTTSEELA-EAVEEEVERQLAELPRREIAAKSLLDYGAIILVDDLEEAIELANEYAPEHLELQ 302 (390)
T ss_pred EEEECCHHHH-HHHHHHHHHHHHhCCcHHHHHHHHHhCCEEEEECCHHHHHHHHHhhchhhheeH
Confidence 9999999999 9999999999999999999999998 6999999999999999999999999854
No 9
>PRK13769 histidinol dehydrogenase; Provisional
Probab=100.00 E-value=6.4e-105 Score=792.76 Aligned_cols=277 Identities=30% Similarity=0.385 Sum_probs=259.0
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 016315 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 152 (391)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~~ 152 (391)
+.++++.|++||++||++||+||++||+|||++++++|+||+++ ++|++++++|+.|++||++||++|+|++|..+
T Consensus 6 ~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~V~~~~----~~~~~~~~ai~~a~~~I~~fh~~q~~~~~~~~ 81 (368)
T PRK13769 6 PRDVVKSVEKIVDDVAERGLQAALEYSERLDGVAPEAALVEPRP----GGDPAVVAAALEAAKSLEALYSRLKPPEAVDF 81 (368)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccceeECchh----hCCHHHHHHHHHHHHHHHHHHHHhCCCCeEec
Confidence 45589999999999999999999999999999988889999732 79999999999999999999999999999886
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcch
Q 016315 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGG 232 (391)
Q Consensus 153 ~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGG 232 (391)
.+|+++||||+||+||||||| +|||||+||++||||||||++||+||||+ + +||.+|+||++||+||||++||
T Consensus 82 -~~Gv~~g~~~~Pi~rvG~YVP---a~~pStvLM~~iPAkvAGV~~Iv~~TPp~--~-i~p~vL~aa~~~Gv~eIy~vGG 154 (368)
T PRK13769 82 -YGGVLRSVFWKPVRRAALYVP---ARYVSTLVMLAVPARAAGVEEIYVVTPPR--G-VTGELLAVAKELGVKGVLAIGG 154 (368)
T ss_pred -CCCeEEEEEEeeeeeeEEEec---cchHHHHHHhhccHhhcCCCeEEEeCCCC--C-CCHHHHHHHHHcCCCeeecccC
Confidence 699999999999999999999 59999999999999999999999999993 3 9999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCCC
Q 016315 233 AQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDS 312 (391)
Q Consensus 233 AQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~a 312 (391)
||||||||||| ||||||||||+|||+|||++++ +|||||+|||||++||||+ |||+|||+||||||||||+|
T Consensus 155 AQAIAa~a~gt----~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~-a~p~~vAaDLLaQAEH~~~a 226 (368)
T PRK13769 155 PHGLAYAVFHM----GVDMVAGPGGLYVQAAKYVLSQ---YVGIDGIEGPTELVVYAEG-VPPEVAVRGALAQLEHGPTS 226 (368)
T ss_pred HHHHHHHhcCC----CcCEEECCCcHHHHHHHHHHhC---CcCCCCcCCCcceEEEcCC-CCHHHHHHHHHHHhhcCCCC
Confidence 99999999999 9999999999999999997644 3999999999999999998 99999999999999999999
Q ss_pred ceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhhCCeEEEECCHHHHHhccchhhhcccccc
Q 016315 313 QVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEVSQEFPSFVLSNLDEV 378 (391)
Q Consensus 313 ~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~~g~iivv~sleeAi~~an~~~~~~l~~~ 378 (391)
++||||||++++ ++|.+++++|+. + +...|.+++|+|+|||++++|++|||||+-.
T Consensus 227 ~~iLvT~s~~la-~~V~~~v~~~~~--------~-~~~~~~iivv~~leeai~~~N~~APEHLel~ 282 (368)
T PRK13769 227 FAYLLSTDAELL-KAAEEIYRRERT--------S-SMGPLEVRKVAGVEEAVRFIDEIAPEHLEVW 282 (368)
T ss_pred cEEEEECCHHHH-HHHHHHHHHHHH--------h-cCCCCeEEEECCHHHHHHHHHhhChHheEee
Confidence 999999999999 999999999842 2 2112569999999999999999999999864
No 10
>KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-99 Score=731.25 Aligned_cols=329 Identities=71% Similarity=1.070 Sum_probs=306.1
Q ss_pred eeeEEEEcCCCCHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeC--CCCCCCCCCCH
Q 016315 47 CSMKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVEN--VSELPDPELDA 124 (391)
Q Consensus 47 ~~m~i~~~~~~~~~~~~~~l~R~~~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs--~~ei~~A~l~~ 124 (391)
|.|+.++...++..+..++++|+..+.+++...|.+||++||.+||.||++||+|||++.+.+..+. -.|.---.+++
T Consensus 6 ~~~~syr~~~l~~~~v~~ll~RPiq~ts~I~~~VnPIIe~Vrs~G~~al~eYtekFdkVqL~~~Vl~apf~e~~~~~l~~ 85 (446)
T KOG2697|consen 6 CSMKSYRLSELSSSQVDSLLSRPIQDTSSIFATVNPIIEAVRSNGDNALKEYTEKFDKVQLNKVVLDAPFSELSVPELDS 85 (446)
T ss_pred eechHHHHhhhhHHHHHHHHhccchhhHHHHHHhhHHHHHHHhcchhHHHHHHHhhcceecccHhhcCCCchhhhhhccH
Confidence 4677777777788888899999999999999999999999999999999999999999988764433 22211116999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcC
Q 016315 125 AVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATP 204 (391)
Q Consensus 125 ~~~~Ai~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TP 204 (391)
++++|++.|++||++||.+|++....+++.+|+.|.+.-|||+|||+|||||+|.+|||.||++|||+|||||+||+.||
T Consensus 86 ~~KEa~Dva~~Ni~aFH~aQl~~t~~Vetm~GV~C~R~sRpI~~VGLYiPGGTAvLPSTALMLgvPAqvAgCk~vV~atP 165 (446)
T KOG2697|consen 86 NVKEAFDVAYDNIYAFHLAQLSTTKSVETMKGVRCKRVSRPIGSVGLYIPGGTAVLPSTALMLGVPAQVAGCKTVVLATP 165 (446)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcceeeeccCceeeeecCccccceeEEccCCceeccchHhhhcCcHhhcCCceEEEecC
Confidence 99999999999999999999999899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCC-CCcccccCCCCCc
Q 016315 205 PSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS-EAMISIDMPAGPS 283 (391)
Q Consensus 205 P~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~-~g~VgID~~AGPS 283 (391)
|++||++.|+++|.|..+|++.|...|||||||||||||+++||||||+||||+|||+||+.+..+ ..-|.|||+||||
T Consensus 166 prKDG~v~pEvvY~A~k~Ga~~I~lAGGAQAiAAMAyGt~~~PKV~KIfGPGNQfVTAAKM~vQNd~~AlvsIDmPAGPS 245 (446)
T KOG2697|consen 166 PRKDGSVCPEVVYCAKKAGATHILLAGGAQAIAAMAYGTDSCPKVEKIFGPGNQFVTAAKMIVQNDYEALVSIDMPAGPS 245 (446)
T ss_pred CCcCCccCcceeeehhhcChhheeccccHHHHHHHHhccccCcchhhhcCCchhhhhhhhhheeccccceEEeccCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999976433 3469999999999
Q ss_pred EEEEEecCCCCHHHHHHHHHhhhccCCCCceEEEec--CchHHHHHHHHHHHHHHhcCCcHHHHHHHhhCCeEEEECCHH
Q 016315 284 EVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIV--GDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDML 361 (391)
Q Consensus 284 EvlVIAD~tAnP~~VAaDLLaQAEHdp~a~aiLvT~--s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~~g~iivv~sle 361 (391)
|||||||++|||++||+|||||||||+||+.|||+- |.+.. ++++++|.+|...|||.+|+++++.++.|+.|++++
T Consensus 246 EVLVIADE~a~p~~vA~DLLSQAEHG~DSQviLv~V~lS~~~~-~~Iq~ai~~qal~LpR~~i~~kai~hS~iV~~d~~~ 324 (446)
T KOG2697|consen 246 EVLVIADEHASPVYVAADLLSQAEHGPDSQVILVVVGLSVDML-NAIQEAIAKQALSLPRGEIASKAISHSFIVFADDMI 324 (446)
T ss_pred eEEEEecCCCChHHHHHHHHhHhhcCCCceEEEEEecCCHHHH-HHHHHHHHHHHhcCcHHHHHHHHhhhceEEEecCHH
Confidence 999999999999999999999999999999999864 56776 999999999999999999999999999999999999
Q ss_pred HHHhccchhhhcccc
Q 016315 362 EVSQEFPSFVLSNLD 376 (391)
Q Consensus 362 eAi~~an~~~~~~l~ 376 (391)
||++++|..+||||-
T Consensus 325 eA~e~SNlYaPEHLi 339 (446)
T KOG2697|consen 325 EAIEFSNLYAPEHLI 339 (446)
T ss_pred HHHhhhhccCchhhe
Confidence 999999999999983
No 11
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=94.87 E-value=0.89 Score=45.07 Aligned_cols=202 Identities=17% Similarity=0.116 Sum_probs=112.5
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhh--
Q 016315 154 MKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILK-- 229 (391)
Q Consensus 154 ~~Gv~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~-- 229 (391)
..|.....++.|+.-|+++.|+- +|-. .+...+||-.+|..-|+-.+| ........+......+|.. .+..
T Consensus 81 ~~~~~~~~~~~p~Gvv~~i~p~n---~p~~~~~~~~~~aL~~GN~vilk~s~--~~~~~~~~l~~~l~~ag~p~~~v~~~ 155 (367)
T cd06534 81 DPGGEAYVRREPLGVVGVITPWN---FPLLLAAWKLAPALAAGNTVVLKPSE--LTPLTALALAELLQEAGLPPGVVNVV 155 (367)
T ss_pred CCCceeEEEEEeeeEEEEECCCc---hHHHHHHHHHHHHHHcCCEEEEECCC--cchHHHHHHHHHHHhcCCCcCeEEEE
Confidence 34666778899999999999953 5544 778889999999986655433 2222334455555666642 2221
Q ss_pred cc-hHHHHHHHhhCCCCCCCceEEecCCcH-HHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhh--
Q 016315 230 AG-GAQAISAMAWGTESCPKVEKIFGPGNQ-YVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ-- 305 (391)
Q Consensus 230 vG-GAQAIAAlAYGTetIpkVDkIvGPGN~-YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQ-- 305 (391)
.| +.+...+|.. -|.+|.|.=-|+. .+..-.+..... +.--+--..|.| .+|-|++||.+.+|..++.-
T Consensus 156 ~~~~~~~~~~l~~----~~~vd~v~~tGs~~~~~~v~~~~~~~-~~~~~~e~~g~~--~~iV~~~ad~~~aa~~i~~~~~ 228 (367)
T cd06534 156 PGGGDEVGAALLS----HPRVDKISFTGSTAVGKAIMKAAAEN-LKPVTLELGGKS--PVIVDEDADLDAAVEGAVFGAF 228 (367)
T ss_pred EcCchhHHHHHhc----CCCcCEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCC--eEEECCCCCHHHHHHHHHHHHH
Confidence 23 3334444442 4678987777773 333323322210 001122335666 45556679988877766533
Q ss_pred --hccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcH-HHHHHHhhCC---eEEEECCHHHHHhccchh
Q 016315 306 --AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRG-EFASKALGHS---FMVFARDMLEVSQEFPSF 370 (391)
Q Consensus 306 --AEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~-~ia~~sl~~g---~iivv~sleeAi~~an~~ 370 (391)
+=+...+...++.... ++ +++.+.+...+...+.. .+.++-+ .| .++.++|++||++++|.-
T Consensus 229 ~~~gq~C~s~~~v~v~~~-~~-~~f~~~l~tl~~~~~~~~~~~~~E~-fgPv~~v~~~~~~~eai~~~n~~ 296 (367)
T cd06534 229 FNAGQICTAASRLLVHES-IY-DEFVEKLVTVLVDVDPDMPIAQEEI-FGPVLPVIRFKDEEEAIALANDT 296 (367)
T ss_pred hcCCCCCCCCcEEEEcHH-HH-HHHHHhhceeeeCCCCCCccccCCc-cCceEEEEecCCHHHHHHHHhCC
Confidence 2333444444444333 55 66666665333333321 1111111 13 456689999999999763
No 12
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=91.49 E-value=8.6 Score=40.41 Aligned_cols=135 Identities=19% Similarity=0.241 Sum_probs=79.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
|...-.++.|+.-|++..|.- || +..++..+||-.||+.=|+= |....-...-.+....+.+|+. .++.+ |
T Consensus 125 ~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VvlK--Ps~~tp~t~~~l~~l~~~aGlP~gvv~~v~g 199 (487)
T PRK09457 125 DGAAVLRHRPHGVVAVFGPYN---FPGHLPNGHIVPALLAGNTVVFK--PSELTPWVAELTVKLWQQAGLPAGVLNLVQG 199 (487)
T ss_pred CceeEEEEeccEEEEEECCCc---hHHHHHHHHHHHHHHcCCEEEEE--CCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC
Confidence 334456789999999999974 66 56778899999999974443 4321101111233455667764 33332 6
Q ss_pred hHHHHHHHhhCCCCCCCceEEecCCcHHH----H--HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhh
Q 016315 232 GAQAISAMAWGTESCPKVEKIFGPGNQYV----T--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 305 (391)
Q Consensus 232 GAQAIAAlAYGTetIpkVDkIvGPGN~YV----t--~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQ 305 (391)
|.+.-.+|. .-|+||+|.=-|..-| . +|++..-. |... +.|-+=++| |++||.+.+|-.++.-
T Consensus 200 ~~~~~~~L~----~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~----~~lE-lGGk~p~IV--~~dADl~~aa~~i~~~ 268 (487)
T PRK09457 200 GRETGKALA----AHPDIDGLLFTGSANTGYLLHRQFAGQPEKI----LALE-MGGNNPLVI--DEVADIDAAVHLIIQS 268 (487)
T ss_pred CHHHHHHHh----cCCCcCEEEEECCHHHHHHHHHHHhhcCCCc----EEEe-cCCCCeEEE--CCCCCHHHHHHHHHHH
Confidence 655444443 3588999965555332 2 23332100 1122 225554444 6789999988888766
Q ss_pred h
Q 016315 306 A 306 (391)
Q Consensus 306 A 306 (391)
+
T Consensus 269 ~ 269 (487)
T PRK09457 269 A 269 (487)
T ss_pred H
Confidence 6
No 13
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=90.17 E-value=27 Score=36.70 Aligned_cols=133 Identities=22% Similarity=0.293 Sum_probs=77.6
Q ss_pred EEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhh--cchH
Q 016315 158 RCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILK--AGGA 233 (391)
Q Consensus 158 ~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~--vGGA 233 (391)
..-.+++|+.-|++..|.- || +..+...+||-.||+.=|+ -|+...=..+-.+....+.+|+. .++. .||.
T Consensus 125 ~~~~~~~P~GVv~~I~PwN---~P~~~~~~~i~~ALaaGN~VVl--KPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~ 199 (484)
T TIGR03240 125 RAVLRHRPHGVVAVFGPYN---FPGHLPNGHIVPALLAGNTVVF--KPSELTPWVAEETVKLWEKAGLPAGVLNLVQGAR 199 (484)
T ss_pred eeEEEEecccEEEEECCCc---hHHHHHHHHHHHHHHcCCEEEE--ECCccccHHHHHHHHHHHHhCcCcccEEEEeCCH
Confidence 3456788999999999974 66 4567788999999996443 34321101112233445567763 3322 2554
Q ss_pred HHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 234 QAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 234 QAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
..-.+|. .-|++|+|.==|+.=|- +|++..- .|...+- |-+=++ -|++||.+..|-.++.=+
T Consensus 200 ~~~~~L~----~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~----~~~lElG-Gk~p~i--V~~dADl~~aa~~i~~~~ 267 (484)
T TIGR03240 200 ETGVALA----AHPDIDGLLFTGSSNTGHLLHRQFAGRPEK----ILALEMG-GNNPLI--VDEVADIDAAVHLIIQSA 267 (484)
T ss_pred HHHHHHh----cCCCCCEEEEECCHHHHHHHHHHhhhcCCC----cEEEECC-CCCeEE--ECCCCCHHHHHHHHHHHH
Confidence 4433443 36899999877776642 2222111 0223322 655444 456799999887776433
No 14
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=90.01 E-value=15 Score=37.95 Aligned_cols=218 Identities=12% Similarity=0.119 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHhccC--CCceEE-ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCC
Q 016315 130 FDVAYNNIYAFHLAQKS--AETSVE-NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 206 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~~--~~~~~~-~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~ 206 (391)
++.++++++.|.+.-.+ ...... ...|...-.++.|+.-|++..| .| |...++..+||-.||+. |++-|+.
T Consensus 77 v~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p---~p-~~~~~~~~~~ALaaGN~--vVlKPs~ 150 (417)
T PRK00197 77 IEGIAEGLRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYE---SR-PNVTVDAAALCLKSGNA--VILRGGS 150 (417)
T ss_pred HHHHHHHHHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcC---CC-chHHHHHHHHHHHhCCe--EEEecCh
Confidence 55666666666432111 111000 1224345567899999999998 34 56667788999999986 4455542
Q ss_pred CCCCCCHHHHHH--------HHHcCCc-chhh---cchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcc
Q 016315 207 QDGSICKEVLYC--------AKKAGVT-HILK---AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMI 274 (391)
Q Consensus 207 ~~G~i~p~iLaA--------A~laGv~-eIy~---vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~V 274 (391)
..|.+... ...+|.. .++. -||...++++-- .-|+||+|.=-|..=|. |++.....-.|
T Consensus 151 ----~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~---~~~~v~~V~fTGS~~~g--~~i~~~a~~~~ 221 (417)
T PRK00197 151 ----EAIHSNRALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLK---LDGYVDVIIPRGGAGLI--RRVVENATVPV 221 (417)
T ss_pred ----hhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhc---cCCCccEEEecCCHHHH--HHHHHhcCCCE
Confidence 23322211 2355652 3333 245454444332 34788988766664432 22111000001
Q ss_pred cccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCCCce-----EEEecCchHHHHHHHHHHHHHHhcCCc-----HH-
Q 016315 275 SIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQV-----VLVIVGDGVDLDAIEQEISKQCQSLPR-----GE- 343 (391)
Q Consensus 275 gID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~a~a-----iLvT~s~~la~~~V~~ei~~ql~~lpr-----~~- 343 (391)
+==+-|=+ -+|.|++||.+..|...+.=+=.... .| ++| .++.. ++..+.+.+.++.+.- ..
T Consensus 222 -~lELGGk~--p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~ 294 (417)
T PRK00197 222 -IEHGDGIC--HIYVDESADLDKALKIVLNAKTQRPS-VCNALETLLV--HEAIA-EEFLPKLAEALAEAGVELRGDEAA 294 (417)
T ss_pred -EeecCCcc--eEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEEEE--EHHHh-HHHHHHHHHHHHHCCCeEecCHHH
Confidence 00122333 24556779999998887754433322 12 333 22454 6666655555555431 00
Q ss_pred --HH-------HHHhh---CC---eEEEECCHHHHHhccch
Q 016315 344 --FA-------SKALG---HS---FMVFARDMLEVSQEFPS 369 (391)
Q Consensus 344 --ia-------~~sl~---~g---~iivv~sleeAi~~an~ 369 (391)
+. ..-+. .| .++-++|.|||++++|.
T Consensus 295 ~~~~PTi~~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~ 335 (417)
T PRK00197 295 LALLPDVVPATEEDWDTEYLDLILAVKVVDSLDEAIAHINR 335 (417)
T ss_pred HHhhcccccCCcchhhhhhhCceEEEEEeCCHHHHHHHHHh
Confidence 10 01111 14 34568999999999985
No 15
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=89.18 E-value=30 Score=35.87 Aligned_cols=168 Identities=17% Similarity=0.177 Sum_probs=89.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
|...-.++.|+.-|+++.|. -||- +++...+||-.||..=| .-|+...-...-.+....+.+|.. .++.+ |
T Consensus 124 ~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~AL~aGN~VV--lKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g 198 (468)
T cd07088 124 NENIFIFKVPIGVVAGILPW---NFPFFLIARKLAPALVTGNTIV--IKPSEETPLNALEFAELVDEAGLPAGVLNIVTG 198 (468)
T ss_pred cceeEEEEecceeEEEEccC---chHHHHHHHHHHHHHHcCCEEE--EECCCcchHHHHHHHHHHHHcCcCccceEEEec
Confidence 43444667999999999995 4664 45678999999998643 334321100111233334456653 33332 3
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhcc
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH 308 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEH 308 (391)
|...-.+|. .-|.+|+|.=-|...+-.. ++ .......+...+- |-+= +|-|++||.+..|-+++.-+=.
T Consensus 199 ~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~-aa~~~~~~~lelG-G~~~--~iV~~dadl~~aa~~iv~~~~~ 270 (468)
T cd07088 199 RGSVVGDALV----AHPKVGMISLTGSTEAGQKIMEA-AAENITKVSLELG-GKAP--AIVMKDADLDLAVKAIVDSRII 270 (468)
T ss_pred CchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHH-HHhcCCcEEEECC-CCCe--EEECCCCCHHHHHHHHHHHHhc
Confidence 333223333 3588999977777554222 11 1100001222222 4443 4446789999888777643322
Q ss_pred CC----CCce-EEEecCchHHHHHHHHHHHHHHhcC
Q 016315 309 GP----DSQV-VLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 309 dp----~a~a-iLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.. .+.. +|| .++.. ++..+.+.+.++.+
T Consensus 271 ~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 303 (468)
T cd07088 271 NCGQVCTCAERVYV--HEDIY-DEFMEKLVEKMKAV 303 (468)
T ss_pred ccCcCCcCCeEEEE--cHHHH-HHHHHHHHHHHHhc
Confidence 22 2323 444 33455 66777666666554
No 16
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=88.01 E-value=5.2 Score=41.42 Aligned_cols=238 Identities=19% Similarity=0.182 Sum_probs=121.9
Q ss_pred CChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCc
Q 016315 71 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AET 149 (391)
Q Consensus 71 ~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~-~~~ 149 (391)
....+-.+.++.+.+.++++.|+=..-.+...-+- + .+.+.-+..+++.++.|.+.-.. ...
T Consensus 48 ~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~----~-------------~~a~~ev~~~~~~~~~~~~~~~~~~~~ 110 (462)
T PF00171_consen 48 LPAAERARILERFADLLEERRDELAELIALETGKP----I-------------AEARGEVDRAIDFLRYYADAARKLAGE 110 (462)
T ss_dssp SSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSS----H-------------HHHHHHHHHHHHHHHHHHHHHHHHTEE
T ss_pred hhhhhHHHHHHHHHHHHhhcccccccccccccccc----c-------------ccccchhhhhhhhhhhhhhcccceehh
Confidence 34556667777888888887775444433332210 0 12222344444444444332111 111
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCcc-hh
Q 016315 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTH-IL 228 (391)
Q Consensus 150 ~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~e-Iy 228 (391)
.....+|.....++.|+.-|++..|. .+|+. +.+...+||-.+|+.=| +.|+...-...-.+..+.+.+|+.. ++
T Consensus 111 ~~~~~~~~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~~~~ALaaGN~VV--lkps~~~~~~~~~l~~~~~~AglP~gvv 186 (462)
T PF00171_consen 111 VLPSDPGSRNYTRREPLGVVLIITPW-NFPLY-LAVWKIAPALAAGNTVV--LKPSEQAPLTALLLAELLEEAGLPPGVV 186 (462)
T ss_dssp EEEESTTEEEEEEEEE-SEEEEEE-S-SSCTH-HHHHHHHHHHHTT-EEE--EEEBTTSHHHHHHHHHHHHHHTSTTTSE
T ss_pred hcccccccccccccccccceeecccc-ccccc-ccccchhhhhcccccce--eeeccccccccccchhhccccccccccc
Confidence 22224788899999999999999995 33433 33556779999999633 3343221112223344455567754 22
Q ss_pred --hcc-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 229 --KAG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 229 --~vG-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
--| |...-.+|. .=|++|+|.=-|+.=+..+ .+..+...-.|-.. +.|-+ -+|-+++||.+..|-.++.
T Consensus 187 ~vv~g~~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~le-lgG~~--p~iV~~daDld~aa~~iv~ 259 (462)
T PF00171_consen 187 NVVPGDGSEVGEALV----SHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLE-LGGKN--PVIVDPDADLDKAAEAIVR 259 (462)
T ss_dssp EEECSSTHHHHHHHH----HTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEE-ECEEE--EEEE-TTSHHHHHHHHHHH
T ss_pred cccccccccccceee----eccccceeeecchhhhhhhhhhhccccccccccc-ccccc--eeeEecccccccccccccc
Confidence 245 777777776 3588999964555322111 11111100001111 22444 4444677898887776665
Q ss_pred hhccC----CCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 QAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 QAEHd----p~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+=+. ..+. .++| .+++. +++.+.+.+.++.+
T Consensus 260 ~~~~~~GQ~C~a~~~v~V--~~~i~-~~f~~~l~~~~~~l 296 (462)
T PF00171_consen 260 GAFFNSGQSCTAPSRVLV--HESIY-DEFVEALKERVAKL 296 (462)
T ss_dssp HHHGGGGTSTTSEEEEEE--EHHHH-HHHHHHHHHHHHTS
T ss_pred hhcccccccccccccccc--ccccc-chhhhhhhhccccc
Confidence 43332 2233 3555 33465 77777777777665
No 17
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=87.61 E-value=37 Score=35.04 Aligned_cols=241 Identities=16% Similarity=0.175 Sum_probs=119.9
Q ss_pred ChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 016315 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (391)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~ 151 (391)
...+..+.++++.+.++++.|+-..-.++..-+ . +..... .++ ...+-++.++++++++.....+.+..
T Consensus 41 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk-~---~~~a~~-----ev~-~~~~~l~~~a~~~~~~~~~~~~~~~~- 109 (453)
T cd07094 41 PPHERMAILERAADLLKKRAEEFAKIIACEGGK-P---IKDARV-----EVD-RAIDTLRLAAEEAERIRGEEIPLDAT- 109 (453)
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC-C---HHHHHH-----HHH-HHHHHHHHHHHHHHHhcCcccccccc-
Confidence 344556667777777777766643333332211 1 111100 122 34444555666665554222221110
Q ss_pred EecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chh
Q 016315 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HIL 228 (391)
Q Consensus 152 ~~~~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy 228 (391)
....+...-.++.|+.-|++..|+- || +..++..+||-.+|+.=|+ -|+... .... .+....+.+|.. .++
T Consensus 110 ~~~~~~~~~~~~~P~Gvv~~I~p~N---~P~~~~~~~~~~AL~aGN~VI~--Kps~~~-p~~~~~l~~~l~~ag~P~g~~ 183 (453)
T cd07094 110 QGSDNRLAWTIREPVGVVLAITPFN---FPLNLVAHKLAPAIATGCPVVL--KPASKT-PLSALELAKILVEAGVPEGVL 183 (453)
T ss_pred ccCCCceEEEEEeccceEEEECCCc---cHHHHHHHHHHHHHHcCCEEEE--ECCCcc-hHHHHHHHHHHHHcCCCcCcE
Confidence 1112444556788999999999964 56 6777888999999976444 344211 1111 222333445652 333
Q ss_pred hc--chHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh-
Q 016315 229 KA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS- 304 (391)
Q Consensus 229 ~v--GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa- 304 (391)
.+ |+...++..-. .-|.+|+|.-=|..=+..+ ++..... .+.+.+= |-+= +|-|++||.+.+|-.++.
T Consensus 184 ~~v~g~~~~~~~~l~---~~~~v~~V~fTGs~~~g~~v~~~a~~~--~~~lelG-Gk~~--~iV~~dadl~~aa~~i~~~ 255 (453)
T cd07094 184 QVVTGEREVLGDAFA---ADERVAMLSFTGSAAVGEALRANAGGK--RIALELG-GNAP--VIVDRDADLDAAIEALAKG 255 (453)
T ss_pred EEEeCCCchHHHHHh---cCCCCCEEEEECcHHHHHHHHHHcCCC--ceEEecC-CCCc--eEECCCCCHHHHHHHHHHH
Confidence 32 33223332222 1367999986666544222 1111110 1344433 5553 444556898877766643
Q ss_pred ---hhccCCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 ---QAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 ---QAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-+=+.-.+...++. .++.. ++..+.+.++++.+
T Consensus 256 ~~~~~GQ~C~a~~~i~V-~~~i~-d~f~~~L~~~~~~~ 291 (453)
T cd07094 256 GFYHAGQVCISVQRIYV-HEELY-DEFIEAFVAAVKKL 291 (453)
T ss_pred HHHhcCCCCcCCeEEEE-eHHHH-HHHHHHHHHHHHhc
Confidence 22233333333333 44455 66666666666544
No 18
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=87.51 E-value=35 Score=34.62 Aligned_cols=168 Identities=21% Similarity=0.197 Sum_probs=89.0
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCC-cchhhc---
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV-THILKA--- 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv-~eIy~v--- 230 (391)
|.....++.|+.-|+++.|+ -+| +.++...+||-.+|..-|+- |+...-...-.+..+.+.+|. ..++.+
T Consensus 87 ~~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~~~~AL~aGN~vilk--ps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~ 161 (432)
T cd07078 87 GELAIVRREPLGVVGAITPW---NFPLLLAAWKLAPALAAGNTVVLK--PSELTPLTALLLAELLAEAGLPPGVLNVVTG 161 (432)
T ss_pred CceEEEEEeecceEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCCCChHHHHHHHHHHHHcCCCcCcEEEEec
Confidence 44556788999999999995 366 77888899999999864433 332222233345555566773 233333
Q ss_pred chHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh---
Q 016315 231 GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA--- 306 (391)
Q Consensus 231 GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA--- 306 (391)
++.+.-.+|. +-+.+|.|.=-|+.-+... ++........+.... .|.+ -+|-|+++|.+.+|-.++.-+
T Consensus 162 ~~~~~~~~l~----~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~-gg~~--~~iV~~~ad~~~aa~~i~~~~~~~ 234 (432)
T cd07078 162 DGDEVGAALA----SHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLEL-GGKS--PLIVFDDADLDAAVKGAVFGAFGN 234 (432)
T ss_pred CchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEec-CCCC--eeEECCCCCHHHHHHHHHHHHHhc
Confidence 2332333343 2477899885555543221 111110000132222 3444 334456689888777665332
Q ss_pred -ccCCCC-ceEEEecCchHHHHHHHHHHHHHHhc
Q 016315 307 -EHGPDS-QVVLVIVGDGVDLDAIEQEISKQCQS 338 (391)
Q Consensus 307 -EHdp~a-~aiLvT~s~~la~~~V~~ei~~ql~~ 338 (391)
=+.-.| +.++|..+ .. +++.+.+.+.++.
T Consensus 235 ~Gq~C~a~~~i~v~~~--~~-~~~~~~L~~~l~~ 265 (432)
T cd07078 235 AGQVCTAASRLLVHES--IY-DEFVERLVERVKA 265 (432)
T ss_pred cCCCccCCceEEEcHH--HH-HHHHHHHHHHHHc
Confidence 222223 34555443 33 4555555555443
No 19
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=87.32 E-value=35 Score=35.19 Aligned_cols=170 Identities=16% Similarity=0.152 Sum_probs=95.4
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v-- 230 (391)
.|.....++.|+.-|+++.|. -||. +.+...+||-.||..=| +-|+...-...-.+..+.+.+|.. .++.+
T Consensus 106 ~~~~~~~~~~P~GVv~~i~p~---N~P~~~~~~~l~~ALaaGN~VV--lKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~ 180 (452)
T cd07102 106 DGFERYIRREPLGVVLIIAPW---NYPYLTAVNAVIPALLAGNAVI--LKHSPQTPLCGERFAAAFAEAGLPEGVFQVLH 180 (452)
T ss_pred CCeeEEEEEEeccEEEEEcCC---chHHHHHHHHHHHHHHcCCEEE--EECCCCCcHHHHHHHHHHHhcCCCcCcEEEEe
Confidence 466666789999999999996 3554 34567789999998644 333321100112334455667653 33332
Q ss_pred chHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccC
Q 016315 231 GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG 309 (391)
Q Consensus 231 GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHd 309 (391)
|+.....+|.- -|.||+|+==|..-+-.. .+..+...-.|... +.|.+ -+|-|++||.+..|..++..+=+.
T Consensus 181 g~~~~~~~L~~----~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~le-lgG~~--~~iV~~dADl~~aa~~i~~~~~~~ 253 (452)
T cd07102 181 LSHETSAALIA----DPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLE-LGGKD--PAYVRPDADLDAAAESLVDGAFFN 253 (452)
T ss_pred CCchhHHHHhc----CCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEE-CCCCC--ceEEcCCCCHHHHHHHHHHHHHHh
Confidence 32243344432 388999887777664221 01111100013333 24555 334467899999999888766554
Q ss_pred CC----C-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 310 PD----S-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 310 p~----a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.. + +-++| .++.+ +++.+.+.+.+..+
T Consensus 254 ~GQ~C~a~~~v~V--~~~v~-~~f~~~L~~~~~~l 285 (452)
T cd07102 254 SGQSCCSIERIYV--HESIY-DAFVEAFVAVVKGY 285 (452)
T ss_pred CCCCCcCCcEEEE--eHHHH-HHHHHHHHHHHHhc
Confidence 32 2 23555 34455 77777776666554
No 20
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=87.00 E-value=36 Score=35.43 Aligned_cols=239 Identities=15% Similarity=0.138 Sum_probs=119.3
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 016315 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 152 (391)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~~ 152 (391)
..+-.+.++.+.+.++++.|+=....++..-+ .+.-... .+ ....+-++.+++++++++....+.... .
T Consensus 43 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk----~~~~a~~-----ev-~~~i~~~~~~~~~~~~~~~~~~~~~~~-~ 111 (455)
T cd07148 43 AHERIAILERLADLMEERADELALLIAREGGK----PLVDAKV-----EV-TRAIDGVELAADELGQLGGREIPMGLT-P 111 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CHHHHHH-----HH-HHHHHHHHHHHHHHHHhcCcccccccc-c
Confidence 34444556666666666666543333322221 0100000 11 233344555666655554322222211 1
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCc-chhh-
Q 016315 153 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILK- 229 (391)
Q Consensus 153 ~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~-iLaAA~laGv~-eIy~- 229 (391)
..+|.....++.|+.-|++..|.- +|+ +..+...+||-.+|+.=|+=-+|-. ..... +..+.+.+|.. .++.
T Consensus 112 ~~~~~~~~~~~~P~Gvv~~I~p~N-~P~-~~~~~~~~~ALaaGN~VvlKps~~~---p~~~~~l~~~~~~aGlP~gvv~~ 186 (455)
T cd07148 112 ASAGRIAFTTREPIGVVVAISAFN-HPL-NLIVHQVAPAIAAGCPVIVKPALAT---PLSCLAFVDLLHEAGLPEGWCQA 186 (455)
T ss_pred CCCCceEEEEEecceEEEEECCCC-cHH-HHHHHHHHHHHHcCCEEEeeCCCcc---cHHHHHHHHHHHHcCCCcCcEEE
Confidence 123555667889999999999953 332 4556678999999997554333321 12222 33344567774 4433
Q ss_pred -cchHHHHHHHhhCCCCCCCceEEecCCcHHH--HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 230 -AGGAQAISAMAWGTESCPKVEKIFGPGNQYV--TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 230 -vGGAQAIAAlAYGTetIpkVDkIvGPGN~YV--t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
.||...-.+|. +-|++|+|.==|..=| ..+++..... .+... +.|-+= +|-|++||.+..+-+++.=+
T Consensus 187 v~g~~~~~~~L~----~~~~v~~v~fTGs~~~G~~i~~~aa~~~--~~~lE-lGG~~p--~iV~~dADl~~aa~~i~~~~ 257 (455)
T cd07148 187 VPCENAVAEKLV----TDPRVAFFSFIGSARVGWMLRSKLAPGT--RCALE-HGGAAP--VIVDRSADLDAMIPPLVKGG 257 (455)
T ss_pred EeCChHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHhhcCC--cEEEe-cCCCCc--eEECCCCCHHHHHHHHHHHH
Confidence 25554333332 3589999955555422 1111111110 12222 226553 34466799998777766433
Q ss_pred ccCC----CCce-EEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EHGP----DSQV-VLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EHdp----~a~a-iLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=... .+.. ++| .+++. +++.+.+.+.++.+
T Consensus 258 f~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 292 (455)
T cd07148 258 FYHAGQVCVSVQRVFV--PAEIA-DDFAQRLAAAAEKL 292 (455)
T ss_pred HhcCCCCccCCeEEEE--cHhHH-HHHHHHHHHHHhcC
Confidence 2221 1222 444 33355 66776666666555
No 21
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=85.36 E-value=41 Score=34.63 Aligned_cols=165 Identities=19% Similarity=0.232 Sum_probs=88.6
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc-
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v- 230 (391)
+|...-.++.|+.-|++..|. -||-. .+..++||-.+|+.=| +-|... ..... .+......+|.. .++.+
T Consensus 109 ~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~Vi--lKps~~-~p~t~~~l~~~~~~ag~P~g~v~~v 182 (451)
T cd07150 109 PGTVSMSVRRPLGVVAGITPF---NYPLILATKKVAFALAAGNTVV--LKPSEE-TPVIGLKIAEIMEEAGLPKGVFNVV 182 (451)
T ss_pred CCceeEEEEecccEEEEECCC---ccHHHHHHHHHHHHHhcCCeEE--EECCcc-CcHHHHHHHHHHHHhCCCcCcEEEe
Confidence 455566789999999999996 36653 4557899999998743 334321 11111 222333445653 23332
Q ss_pred -c-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHH
Q 016315 231 -G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 302 (391)
Q Consensus 231 -G-GAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDL 302 (391)
| |...-.+|. .-|.+|+|.=-|..=| .+|+.+ . .+...+ .|.+= +|-|++||.+..|..+
T Consensus 183 ~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~-~----~~~lel-GG~~~--~iV~~dadl~~aa~~i 250 (451)
T cd07150 183 TGGGAEVGDELV----DDPRVRMVTFTGSTAVGREIAEKAGRHL-K----KITLEL-GGKNP--LIVLADADLDYAVRAA 250 (451)
T ss_pred eCCCcHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcC-C----ceEeec-CCCCe--eEECCCCChHHHHHHH
Confidence 2 333333332 3588999966666544 222221 1 132332 25554 4445678999877766
Q ss_pred Hhh-hccCC---CCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 303 LSQ-AEHGP---DSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 303 LaQ-AEHdp---~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+.= -.|.- .+...++. .++.. ++..+.+.++++.+
T Consensus 251 ~~~~~~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~~ 289 (451)
T cd07150 251 AFGAFMHQGQICMSASRIIV-EEPVY-DEFVKKFVARASKL 289 (451)
T ss_pred HHHHHhhcCCCCCCCeeEEE-cHHHH-HHHHHHHHHHHHhc
Confidence 521 22322 23333333 33354 66666666666554
No 22
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=85.27 E-value=23 Score=37.38 Aligned_cols=169 Identities=15% Similarity=0.187 Sum_probs=90.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v-- 230 (391)
|...-..+.|+.-|++..|. -|| +..++..+||-.||+.=|+ -|+. ...... .+......+|.. .++.+
T Consensus 145 ~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~VVl--KPs~-~tp~~~~~l~~~~~eaGlP~gvv~~v~ 218 (500)
T cd07083 145 GEDNESFYVGLGAGVVISPW---NFPVAIFTGMIVAPVAVGNTVIA--KPAE-DAVVVGYKVFEIFHEAGFPPGVVQFLP 218 (500)
T ss_pred CceEEEEEeccceEEEEcCC---ccHHHHHHHHHHHHHHcCCeEEE--eCCC-cchHHHHHHHHHHHHcCCCCCceEEEe
Confidence 43444568999999999996 477 5667888999999987444 3442 211122 233344567765 23322
Q ss_pred -chHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCC-CCcccccCCCCCcEEEEEecCCCCHHHHHHHH
Q 016315 231 -GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNS-EAMISIDMPAGPSEVLVIADIYASPVHIAADL 302 (391)
Q Consensus 231 -GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~~~-~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDL 302 (391)
+|...-.+|. +-|+||+|.==|..-+- +|+++.+.. ...| +=-+.|-+ -+|-|++||.+..|-.+
T Consensus 219 g~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v-~lElgG~~--~~iV~~dadl~~aa~~i 291 (500)
T cd07083 219 GVGEEVGAYLT----EHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRL-YVETGGKN--AIIVDETADFELVVEGV 291 (500)
T ss_pred CCCchhHHHHh----cCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcE-EEecCCCC--eEEECCCCCHHHHHHHH
Confidence 3444444443 35889998766665443 222110000 0001 11123333 34445679999988887
Q ss_pred Hhhh-ccC---CCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 303 LSQA-EHG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 303 LaQA-EHd---p~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+.-+ .+. -.+...++.. +++. +++.+.+.+.++.+
T Consensus 292 ~~~~f~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~ 330 (500)
T cd07083 292 VVSAFGFQGQKCSAASRLILT-QGAY-EPVLERLLKRAERL 330 (500)
T ss_pred HHHHHhhcCCCCCCCeeEEEc-HHHH-HHHHHHHHHHHHcC
Confidence 7555 332 1222233333 3344 66666666665444
No 23
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=85.17 E-value=48 Score=34.35 Aligned_cols=166 Identities=16% Similarity=0.127 Sum_probs=89.6
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v-- 230 (391)
+|.....++.|+.-|+++.|.- || ++.+...+||-.+|+.=|+--+|- .-...-.+....+.+|.. .++.+
T Consensus 109 ~~~~~~~~~~P~Gvv~~I~p~N---~P~~~~~~~~~~AL~aGN~Vilkps~~--~p~~~~~l~~~l~~aglP~~vv~~v~ 183 (457)
T cd07114 109 GDYLNFTRREPLGVVAAITPWN---SPLLLLAKKLAPALAAGNTVVLKPSEH--TPASTLELAKLAEEAGFPPGVVNVVT 183 (457)
T ss_pred CCceEEEEEecceEEEEECCCc---cHHHHHHHHHHHHHhcCCeEEeECCcc--chHHHHHHHHHHHHcCcCCCcEEEEe
Confidence 4555667889999999999975 45 344567789999999755443322 101112233344556652 33332
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHH
Q 016315 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 231 G-GAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLL 303 (391)
| |...-.+|. .-|.+|+|+==|..=+ .+||++. .+... +..---+|-|++||.+.+|.+++
T Consensus 184 g~~~~~~~~l~----~~~~i~~V~ftGs~~~g~~v~~~aa~~~~-----~~~le---lgG~~~~iV~~dAdl~~aa~~i~ 251 (457)
T cd07114 184 GFGPETGEALV----EHPLVAKIAFTGGTETGRHIARAAAENLA-----PVTLE---LGGKSPNIVFDDADLDAAVNGVV 251 (457)
T ss_pred CCCchHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcCC-----eEEEe---cCCCCeeEECCCCCHHHHHHHHH
Confidence 2 333333343 3578998884443322 2222210 01111 11233556678899999888876
Q ss_pred hhhcc----CCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 304 SQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 304 aQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.=+=. .-.|...++. .++.+ ++..+.+.++++.+
T Consensus 252 ~~~~~~~GQ~C~a~~~v~V-~~~v~-~~f~~~l~~~~~~~ 289 (457)
T cd07114 252 AGIFAAAGQTCVAGSRLLV-QRSIY-DEFVERLVARARAI 289 (457)
T ss_pred HHHHhccCCCCCCCceEEE-cHHHH-HHHHHHHHHHHHhC
Confidence 53322 2222223333 34455 77777777776655
No 24
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=85.08 E-value=52 Score=34.30 Aligned_cols=168 Identities=18% Similarity=0.219 Sum_probs=90.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
+.....++.|+.-|+++.|. -|| +++++..+||-.||+.=|+- |+...-...-.+......+|.. .++.+ |
T Consensus 126 ~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~~~~ALaaGN~VvlK--ps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g 200 (478)
T cd07131 126 NKDAMTRRQPIGVVALITPW---NFPVAIPSWKIFPALVCGNTVVFK--PAEDTPACALKLVELFAEAGLPPGVVNVVHG 200 (478)
T ss_pred CceEEEEeeceeEEEEECCc---CcHHHHHHHHHHHHHHcCCEEEEE--CCCcCcHHHHHHHHHHHhcCcCCCcEEEEec
Confidence 33456788999999999995 366 45556889999999975443 4321111122233444556553 22222 3
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhcc
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH 308 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEH 308 (391)
|...-.+|. +-|+||+|+==|..-+-.+ |..... .-.+...+ .|-+ -+|-|++||.+..|-.++.=+=.
T Consensus 201 ~~~~~~~~L~----~~~~vd~V~ftGs~~~g~~i~~~aa~~-~~~~~lel-gG~~--p~iV~~dADl~~Aa~~i~~~~~~ 272 (478)
T cd07131 201 RGEEVGEALV----EHPDVDVVSFTGSTEVGERIGETCARP-NKRVALEM-GGKN--PIIVMDDADLDLALEGALWSAFG 272 (478)
T ss_pred CchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhc-CCcEEEEC-CCCC--eEEECCCCCHHHHHHHHHHHHHh
Confidence 333333343 3578999988888754322 221100 00133322 2655 44555679999887776632111
Q ss_pred C----CCC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 309 G----PDS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 309 d----p~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+ -.+ .-++| .++.. ++..+.+.++++.+
T Consensus 273 ~~GQ~C~a~~rv~V--~~~i~-~~f~~~l~~~~~~~ 305 (478)
T cd07131 273 TTGQRCTATSRLIV--HESVY-DEFLKRFVERAKRL 305 (478)
T ss_pred cCCCCCCCCeEEEE--ehhhH-HHHHHHHHHHHHhc
Confidence 1 122 23555 33454 66666666655554
No 25
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=84.73 E-value=46 Score=34.18 Aligned_cols=168 Identities=20% Similarity=0.152 Sum_probs=90.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--ch
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--GG 232 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--GG 232 (391)
|...-.+..|+.-|+++.|. .+|+ .+.++..+||-.+|..=|+-.+|- .-...-.+....+.+|.. .++.+ |+
T Consensus 114 ~~~~~~~~~P~GVv~~i~p~-N~P~-~~~~~~~~~ALaaGN~VI~Kps~~--~p~~~~~l~~~l~~ag~P~gvv~~v~g~ 189 (453)
T cd07149 114 GRIGFTIREPIGVVAAITPF-NFPL-NLVAHKVGPAIAAGNAVVLKPASQ--TPLSALKLAELLLEAGLPKGALNVVTGS 189 (453)
T ss_pred CeeEEEEeecceEEEEECCC-CChH-HHHHHHHHHHHHcCCEEEEECCCc--chHHHHHHHHHHHHcCcCccceEEeecC
Confidence 33344567899999999996 3333 356678899999999644433321 101111233344455642 33332 43
Q ss_pred HHH-HHHHhhCCCCCCCceEEecCCcHHHHHHH-HHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccC-
Q 016315 233 AQA-ISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG- 309 (391)
Q Consensus 233 AQA-IAAlAYGTetIpkVDkIvGPGN~YVt~AK-r~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHd- 309 (391)
... -.+|. .-|++|+|+=-|..-+-.+= +..+.. .+-..+ -|-+ -+|-|++||.+.+|-.++.-+=..
T Consensus 190 ~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~a~~~--~~~lel-GGk~--p~iV~~dadl~~aa~~i~~~~~~~~ 260 (453)
T cd07149 190 GETVGDALV----TDPRVRMISFTGSPAVGEAIARKAGLK--KVTLEL-GSNA--AVIVDADADLEKAVERCVSGAFANA 260 (453)
T ss_pred chHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHcCCC--ceeeec-CCCc--eEEECCCCCHHHHHHHHHHHHHHhc
Confidence 322 23333 24789999877777654331 111110 133332 2443 345566799999888876533222
Q ss_pred ---CCC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 310 ---PDS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 310 ---p~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-.+ +.++| . ++.. ++..+.+.+.++.+
T Consensus 261 GQ~C~a~~~v~V-~-~~i~-d~f~~~L~~~~~~~ 291 (453)
T cd07149 261 GQVCISVQRIFV-H-EDIY-DEFLERFVAATKKL 291 (453)
T ss_pred CCCCCCCceEEE-c-HhHH-HHHHHHHHHHHHhC
Confidence 222 33455 3 3355 66666666666655
No 26
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=84.69 E-value=43 Score=34.71 Aligned_cols=165 Identities=22% Similarity=0.302 Sum_probs=91.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
|...-.++.|+.-|++..|.- ||-.. +...+||-.||+.=| +-|+...-...-.+......+|.. .++.+ |
T Consensus 111 ~~~~~~~~~P~GVV~~I~p~N---~P~~~~~~~~~~ALaaGN~VV--~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g 185 (456)
T cd07110 111 DFKARVRREPVGVVGLITPWN---FPLLMAAWKVAPALAAGCTVV--LKPSELTSLTELELAEIAAEAGLPPGVLNVVTG 185 (456)
T ss_pred CceeEEEEecceeEEEECCCC---hHHHHHHHHHHHHHHcCCEEE--EECcccchHHHHHHHHHHHHcCCCCCcEEEEec
Confidence 545557899999999999964 77544 457889999999544 334422111111233344566663 33333 3
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~Y------Vt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
|...-.+|. .-|.||+|+==|..= .++|+.+- .|...+ .|-+= +|-|++||.+..|.+++.
T Consensus 186 ~~~~~~~~L~----~~~~v~~V~fTGs~~~g~~v~~~aa~~~~-----~~~lEl-gG~~~--~iV~~dadl~~aa~~i~~ 253 (456)
T cd07110 186 TGDEAGAPLA----AHPGIDKISFTGSTATGSQVMQAAAQDIK-----PVSLEL-GGKSP--IIVFDDADLEKAVEWAMF 253 (456)
T ss_pred CchHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhcCC-----eEEEEc-CCCCe--eEECCCCCHHHHHHHHHH
Confidence 443333443 358899887777633 23332210 122222 24443 344567899998888764
Q ss_pred hh----ccCCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 QA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 QA----EHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-+ =+.-.+...++. .++.. ++..+.+.+.++.+
T Consensus 254 ~~~~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~ 290 (456)
T cd07110 254 GCFWNNGQICSATSRLLV-HESIA-DAFLERLATAAEAI 290 (456)
T ss_pred HHHhcCCCCCCCCceEEE-cHHHH-HHHHHHHHHHHHhc
Confidence 42 222233333443 34455 77777777766555
No 27
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=84.61 E-value=12 Score=38.61 Aligned_cols=218 Identities=11% Similarity=0.110 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHhccCC-CceE--EecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCC
Q 016315 130 FDVAYNNIYAFHLAQKSA-ETSV--ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 206 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~~~-~~~~--~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~ 206 (391)
++.+++.++.|.+.-.+- .... ...+|...-.++.|+.-||+..|. + |...++..+||-.||+. |++-|..
T Consensus 65 v~~~~~~~~~~a~~a~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw---~-p~~~~~~~~~ALaaGN~--vVlKps~ 138 (398)
T TIGR00407 65 LKGIADGVKDVIELADPVGKVIDGRELDSGLTLERVRVPLGVLGVIYEA---R-PNVTVDIASLCLKTGNA--VILRGGK 138 (398)
T ss_pred HHHHHHHHHHHhcCCCCCcccccceecCCCceEEEEEeCcEEEEEEeCC---C-chHHHHHHHHHHHhCCe--EEECCCh
Confidence 567777777665433221 1111 123566677789999999999998 3 56667789999999993 4454542
Q ss_pred CCCCCCHH---HHH-----HHHHcCCc-chhh-c-c-hHHHH-HHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCC
Q 016315 207 QDGSICKE---VLY-----CAKKAGVT-HILK-A-G-GAQAI-SAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEA 272 (391)
Q Consensus 207 ~~G~i~p~---iLa-----AA~laGv~-eIy~-v-G-GAQAI-AAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g 272 (391)
-.|. .|+ |...+|.. .++. + | |...+ ++|. +=|+||+|.=-|..=|..+ .+..+.
T Consensus 139 ----~tp~~~~~l~~~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~----~~~~v~~v~fTGs~~vg~~~~~~~~~--- 207 (398)
T TIGR00407 139 ----EAVRSNKALVEVIQDALAQTGLPVGAVQLIETPSRELVSELLD----LDEYIDLLIPRGGNGLVRLIKQTSTI--- 207 (398)
T ss_pred ----hhHHHHHHHHHHHHHHHHHcCCChhHEEEecCCCHHHHHHHHh----CCCCeeEEEecCCHHHHHHHHHhCCC---
Confidence 1221 111 13356653 2322 1 2 33333 4454 3578999987776332211 111121
Q ss_pred cccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh-ccCC--CC-ceEEEecCchHHHHHHHHHHHHHHhcCC----cHHH
Q 016315 273 MISIDMPAGPSEVLVIADIYASPVHIAADLLSQA-EHGP--DS-QVVLVIVGDGVDLDAIEQEISKQCQSLP----RGEF 344 (391)
Q Consensus 273 ~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA-EHdp--~a-~aiLvT~s~~la~~~V~~ei~~ql~~lp----r~~i 344 (391)
.-+=...|-+= +|-|++||.+..|-.++.=+ .++- .| .-++|-. ++. ++..+.+.+.++.+. ..+.
T Consensus 208 -~~~~e~gGk~p--~iV~~dADl~~Aa~~iv~~~~~~GQ~C~a~~rv~V~~--~v~-d~f~~~l~~~~~~~~~~~~~~~~ 281 (398)
T TIGR00407 208 -PVLGHGDGICH--IYLDESADLIKAIKVIVNAKTQRPSTCNAIETLLVNK--AIA-REFLPVLENQLLEKGVTIHADAY 281 (398)
T ss_pred -CEEEecCCcce--EEEeCCCCHHHHHHHHHhhhcCCCCcccccceEEEeH--HHH-HHHHHHHHHHHHhcCCEEecCHH
Confidence 12223334333 44455689998776655433 2221 11 2245533 344 555555555544332 1111
Q ss_pred HHHH---------------hh---CC---eEEEECCHHHHHhccchh
Q 016315 345 ASKA---------------LG---HS---FMVFARDMLEVSQEFPSF 370 (391)
Q Consensus 345 a~~s---------------l~---~g---~iivv~sleeAi~~an~~ 370 (391)
+.+- +. .| .++.++|+|||++++|..
T Consensus 282 i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~ 328 (398)
T TIGR00407 282 ALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQY 328 (398)
T ss_pred HHHHHhccCccccccccccccchhhCceeEEEEECCHHHHHHHHHHh
Confidence 1111 11 13 345589999999999873
No 28
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=84.12 E-value=52 Score=33.53 Aligned_cols=159 Identities=13% Similarity=0.140 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCC
Q 016315 130 FDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDG 209 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G 209 (391)
+..++++++.|......-........+ ..-.++.|+.-|+++.|+ . +|-..+...+||-.||..-|+=.+|- .
T Consensus 66 v~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~P~Gvv~~i~p~-N--~P~~~~~~~~~aL~aGN~vilKps~~--~- 138 (397)
T cd07077 66 LYKNIDTERGITASVGHIQDVLLPDNG-ETYVRAFPIGVTMHILPS-T--NPLSGITSALRGIATRNQCIFRPHPS--A- 138 (397)
T ss_pred HHHHHHHHHHHHHhcCcccceEecCCC-ceEEEEecceEEEEEeCC-C--CchHHHHHHHHHHHcCCcEEEEcCcc--h-
Confidence 566666676665421111111111123 345789999999999995 3 44447889999999999766543332 2
Q ss_pred CCCHHH----HHHHHHcCC-cchhh---cchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHH-HhcCCCCcccccCCC
Q 016315 210 SICKEV----LYCAKKAGV-THILK---AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNSEAMISIDMPA 280 (391)
Q Consensus 210 ~i~p~i----LaAA~laGv-~eIy~---vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr-~v~~~~g~VgID~~A 280 (391)
...... +..+.-+|. ..++. -+|.+...+|. +-|.+|+|+-=|+.=+..+=+ .... .-+ +.-
T Consensus 139 p~~~~~l~~~~~~~~~~g~p~~~v~~v~~~~~~~~~~l~----~~~~vd~v~ftGs~~~~~~v~~~~~~----~~~-~~~ 209 (397)
T cd07077 139 PFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELL----SHPKIDLIVATGGRDAVDAAVKHSPH----IPV-IGF 209 (397)
T ss_pred hhHHHHHHHHHHHHhhcCCCCceEEEecCCCHHHHHHHH----cCCCCCEEEecCCHHHHHHHHHcCCC----Cce-EEe
Confidence 222222 222222254 23322 23544444443 247799999888876543211 1111 112 333
Q ss_pred CCcEEEEEecCCCCHHHHHHHHHh
Q 016315 281 GPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 281 GPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
|+.--.+|-|++||++..+..++-
T Consensus 210 ~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 210 GAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred cCCcceEEEcCCCCHHHHHHHHHH
Confidence 333446667778999986655443
No 29
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=84.08 E-value=59 Score=34.10 Aligned_cols=168 Identities=20% Similarity=0.200 Sum_probs=88.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCcc-hhh-c-
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-ILK-A- 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~e-Iy~-v- 230 (391)
|...-.++.|+.-|++..|. -||-. .+...+||-.||+.=| +-|+... .... .+......+|..+ ++. +
T Consensus 130 ~~~~~~~~~P~Gvv~~I~p~---N~Pl~~~~~~~~~ALaaGN~vv--lKPs~~t-p~t~~~l~~l~~~aglP~g~~~~v~ 203 (481)
T TIGR03216 130 GALNYAVRKPLGVVGVISPW---NLPLLLMTWKVGPALACGNTVV--VKPSEET-PGTATLLGEVMNAVGVPKGVYNVVH 203 (481)
T ss_pred CceeEEEEeccceEEEECCC---CcHHHHHHHHHHHHHHcCCEEE--EECCccc-hHHHHHHHHHHHHcCCCcCceEEEe
Confidence 33444677999999999996 36654 4556889999998644 4454311 1122 2233445566542 221 2
Q ss_pred c-hHHHHH-HHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh-
Q 016315 231 G-GAQAIS-AMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA- 306 (391)
Q Consensus 231 G-GAQAIA-AlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA- 306 (391)
| |...+. .|. .-|+||+|.=-|...+-.+ .+..+...-.|... +.|.+= +|-|++||.+..|-.++.=+
T Consensus 204 g~~~~~~~~~l~----~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lE-lgG~n~--~iV~~dadl~~aa~~i~~~~f 276 (481)
T TIGR03216 204 GFGPDSAGEFLT----RHPGVDAITFTGETRTGSAIMKAAADGVKPVSFE-LGGKNA--AIVFADCDFDAAVAGILRSAF 276 (481)
T ss_pred cCChhHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEE-CCCCCe--EEECCCCCHHHHHHHHHHHHH
Confidence 2 333232 232 3588999986666554322 11111100013333 236664 34455689998888876544
Q ss_pred ccCC---CCce-EEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EHGP---DSQV-VLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EHdp---~a~a-iLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.+.- .+.. ++| .++.. ++..+.+.+.++.+
T Consensus 277 ~~~GQ~C~a~~rv~V--~~~i~-~~f~~~l~~~~~~~ 310 (481)
T TIGR03216 277 LNTGQVCLGTERVYV--ERPIF-DRFVAALKARAESL 310 (481)
T ss_pred hcCCCCCCCCeEEEE--cHHHH-HHHHHHHHHHHHhc
Confidence 3322 2333 444 33454 66666666655544
No 30
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=83.13 E-value=62 Score=33.67 Aligned_cols=238 Identities=14% Similarity=0.155 Sum_probs=114.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEEe
Q 016315 74 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVEN 153 (391)
Q Consensus 74 ~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~~~ 153 (391)
.+-.+.++.+.+.++++-|+-..-.++.-.+- +.-... .++ ...+-++..++.++++.....+.+|...
T Consensus 61 ~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~----~~~a~~-----ev~-~~~~~l~~~~~~~~~~~g~~~~~~~~~~- 129 (473)
T cd07082 61 EERIDCLHKFADLLKENKEEVANLLMWEIGKT----LKDALK-----EVD-RTIDYIRDTIEELKRLDGDSLPGDWFPG- 129 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc----HHHHHH-----HHH-HHHHHHHHHHHHHHHhcCCccccccccc-
Confidence 34445555666666666665444443332211 000000 111 2334445555555555333333333110
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCC-cchhhc
Q 016315 154 MKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGV-THILKA 230 (391)
Q Consensus 154 ~~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv-~eIy~v 230 (391)
..|...-.++.|+.-|++..|.- +|- +.+...+||-.||..-|+- |+... ...+ .+..+.+.+|. +.++.+
T Consensus 130 ~~~~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~i~~AL~aGN~vilK--ps~~~-~~~~~~l~~~l~~aglp~~~~~v 203 (473)
T cd07082 130 TKGKIAQVRREPLGVVLAIGPFN---YPLNLTVSKLIPALIMGNTVVFK--PATQG-VLLGIPLAEAFHDAGFPKGVVNV 203 (473)
T ss_pred CCCceeEEEEecceEEEEECCcC---cHHHHHHHHHHHHHHcCCEEEEE--CCCCC-cHHHHHHHHHHHHcCCCccceEE
Confidence 13545567889999999999963 454 3456779999999865543 43222 1222 23344455565 234332
Q ss_pred --c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 231 --G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 231 --G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
| |...-.+|. .-|.+|+|.==|..-+-.+ .+..... .+.+.+ |..--+| .+++||.+.+|-.++.-+
T Consensus 204 v~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~a~~~--~~~lel--gg~n~~i-V~~dadl~~aa~~i~~~~ 274 (473)
T cd07082 204 VTGRGREIGDPLV----THGRIDVISFTGSTEVGNRLKKQHPMK--RLVLEL--GGKDPAI-VLPDADLELAAKEIVKGA 274 (473)
T ss_pred EecCcHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHhCCC--cEEEEc--CCCCeEE-ECCCCCHHHHHHHHHHHH
Confidence 2 333223332 2578999944443332211 1111110 133443 3333344 455789888766655433
Q ss_pred cc----CCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+ .-.|...++. .++.. +++.+.+.+.++.+
T Consensus 275 ~~~~GQ~C~a~~~v~v-~~~i~-d~f~~~l~~~~~~~ 309 (473)
T cd07082 275 LSYSGQRCTAIKRVLV-HESVA-DELVELLKEEVAKL 309 (473)
T ss_pred HHhCCCcCCCCeEEEE-cHHHH-HHHHHHHHHHHhcC
Confidence 22 2223333333 33455 66666666666654
No 31
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=81.15 E-value=71 Score=32.99 Aligned_cols=167 Identities=19% Similarity=0.190 Sum_probs=87.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v--G 231 (391)
|...-.++.|+.-|+++.|. .+|+ +..+...+||-.+|+.=|+- |+... .... .+..+.+.+|+. .++.+ |
T Consensus 114 ~~~~~~~~~P~Gvv~~I~p~-N~P~-~~~~~~~~~ALaaGN~VIlK--ps~~~-p~~~~~l~~~l~~ag~P~g~v~~v~g 188 (452)
T cd07147 114 GRQGLVRRFPIGPVSAITPF-NFPL-NLVAHKVAPAIAAGCPFVLK--PASRT-PLSALILGEVLAETGLPKGAFSVLPC 188 (452)
T ss_pred CceeEEEEeceeEEEEEcCC-CcHH-HHHHHHHHHHHHcCCEEEEE--CCCCC-cHHHHHHHHHHHHcCCCcCcEEEEeC
Confidence 43334567899999999996 4444 66666789999999864443 43211 1122 233334556653 33332 4
Q ss_pred hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh----
Q 016315 232 GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA---- 306 (391)
Q Consensus 232 GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA---- 306 (391)
+.....+|. .=|.+|+|.=-|..=+-.. .+..+.. .|...+ .|.+=+ |-|++||.+..|-.++.-+
T Consensus 189 ~~~~~~~l~----~~~~v~~v~fTGs~~~g~~v~~~a~~~--~v~lel-gG~~p~--iV~~dadl~~aa~~i~~~~~~~~ 259 (452)
T cd07147 189 SRDDADLLV----TDERIKLLSFTGSPAVGWDLKARAGKK--KVVLEL-GGNAAV--IVDSDADLDFAAQRIIFGAFYQA 259 (452)
T ss_pred CccchhHHh----cCCCCCEEEEECCHHHHHHHHHHhCcC--ceEeec-CCCCcE--EECCCCCHHHHHHHHHHHHHhcc
Confidence 333223332 2378999865555433111 1111211 133333 365533 3445689998776654221
Q ss_pred ccCCCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EHGPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EHdp~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+.-.+. -++| .++.+ ++..+.+.++++.+
T Consensus 260 GQ~C~a~~~v~V--~~~i~-d~f~~~L~~~~~~~ 290 (452)
T cd07147 260 GQSCISVQRVLV--HRSVY-DEFKSRLVARVKAL 290 (452)
T ss_pred CCCCcCCcEEEE--chhHH-HHHHHHHHHHHHhC
Confidence 1122222 3445 34565 77777777666655
No 32
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=80.15 E-value=78 Score=32.81 Aligned_cols=166 Identities=15% Similarity=0.129 Sum_probs=87.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCC-cchhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV-THILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv-~eIy~v--G 231 (391)
|...-.++.|+.-|+++.|.- ||-. .+...+||-.+|+.=|+- |+...-..+-.+......+|. +.++.+ |
T Consensus 107 ~~~~~~~~~P~GVV~~I~p~N---~P~~~~~~~~~~ALaaGN~Vv~K--ps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g 181 (457)
T cd07090 107 GSFAYTRREPLGVCAGIGAWN---YPIQIASWKSAPALACGNAMVYK--PSPFTPLTALLLAEILTEAGLPDGVFNVVQG 181 (457)
T ss_pred CceEEEEEeecceEEEECCCc---cHHHHHHHHHHHHHhcCCeeeec--CCCcCcHHHHHHHHHHHHcCCCcccEEEEeC
Confidence 445556789999999999964 6744 455668999999864443 432111112223344455676 344332 4
Q ss_pred hHHHHHHHhhCCCCCCCceEEecCCcHHH-----HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh--
Q 016315 232 GAQAISAMAWGTESCPKVEKIFGPGNQYV-----TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS-- 304 (391)
Q Consensus 232 GAQAIAAlAYGTetIpkVDkIvGPGN~YV-----t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa-- 304 (391)
+...-.+|. .-|.+|+|.==|..=+ .+|.+-.-. + +=-+.|.+ -+|-|++||.+..|-.++.
T Consensus 182 ~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~----~-~lelgG~~--p~iV~~dAdl~~Aa~~i~~~~ 250 (457)
T cd07090 182 GGETGQLLC----EHPDVAKVSFTGSVPTGKKVMSAAAKGIKH----V-TLELGGKS--PLIIFDDADLENAVNGAMMAN 250 (457)
T ss_pred ChhhHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhccCCc----e-EEecCCCC--ceEECCCCCHHHHHHHHHHHH
Confidence 443222232 3578999865554321 112110000 1 11233444 3444667999987777662
Q ss_pred --hhccCCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 --QAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 --QAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.+=+.-.+...++.. ++.. ++..+.+.++++.+
T Consensus 251 ~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~ 285 (457)
T cd07090 251 FLSQGQVCSNGTRVFVQ-RSIK-DEFTERLVERTKKI 285 (457)
T ss_pred HhcCCCCCCCCeEEEEc-HHHH-HHHHHHHHHHHHhc
Confidence 222333333334433 4455 66666666666654
No 33
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=79.17 E-value=67 Score=33.88 Aligned_cols=164 Identities=19% Similarity=0.203 Sum_probs=91.1
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v-- 230 (391)
|.....++.|+.-|++..|.- ||-. .++..+||-.||+.=|+ -|+... .... .+......+|.. .++.+
T Consensus 135 ~~~~~~~~~P~GVv~~I~P~N---~P~~~~~~~~~~ALaaGN~Vvl--Kps~~~-p~~~~~l~~~l~~aGlP~g~v~~v~ 208 (481)
T cd07143 135 KKLTYTRHEPIGVCGQIIPWN---FPLLMCAWKIAPALAAGNTIVL--KPSELT-PLSALYMTKLIPEAGFPPGVINVVS 208 (481)
T ss_pred CceEEEEEecceeEEEECCCc---ChHHHHHHHHHHHHHcCCEEEE--eCCCCC-cHHHHHHHHHHHhcCcCcccEEEEe
Confidence 434456889999999999975 6644 47789999999997443 343211 1122 233344556653 34443
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHH
Q 016315 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 231 G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLL 303 (391)
| |...-.+|. .-|++|+|.=-|..-|- +|++-+- .+... +.|-+=++ -|++||.+..+.+++
T Consensus 209 g~~~~~~~~L~----~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~----~~~lE-lGG~~p~i--V~~dADl~~Aa~~i~ 277 (481)
T cd07143 209 GYGRTCGNAIS----SHMDIDKVAFTGSTLVGRKVMEAAAKSNLK----KVTLE-LGGKSPNI--VFDDADLESAVVWTA 277 (481)
T ss_pred CCchhHHHHHh----cCCCCCEEEEECchHHHHHHHHHHHHhcCC----EEEee-cCCCCeeE--ECCCCCHHHHHHHHH
Confidence 3 333223332 35899999877776542 1111000 02221 22544333 356689998877766
Q ss_pred hhhccCC----CCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 304 SQAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 304 aQAEHdp----~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.-+=++. .+. -++| .++++ ++..+.+.+.++.+
T Consensus 278 ~~~~~naGQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 315 (481)
T cd07143 278 YGIFFNHGQVCCAGSRIYV--QEGIY-DKFVKRFKEKAKKL 315 (481)
T ss_pred HHHHhccCCCCCCCcEEEE--eHhHH-HHHHHHHHHHHHhc
Confidence 5443332 222 2444 33355 77777777766655
No 34
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=78.98 E-value=85 Score=32.56 Aligned_cols=136 Identities=19% Similarity=0.233 Sum_probs=76.6
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCHHHH-HHHHHcCCc-chhhc--
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILKA-- 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iL-aAA~laGv~-eIy~v-- 230 (391)
|...--++.|+.-|++..|. -||-. .+...+||-.||+.=|+ -|+. ........+ .+...+|+. .++.+
T Consensus 88 ~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VI~--Kps~-~~~~~~~~l~~~~~~ag~P~g~~~~v~ 161 (431)
T cd07095 88 QGRAVLRHRPHGVMAVFGPF---NFPGHLPNGHIVPALLAGNTVVF--KPSE-LTPAVAELMVELWEEAGLPPGVLNLVQ 161 (431)
T ss_pred CceEEEEEecceEEEEECCC---chHHHHHHHHHHHHHhcCCEEEe--eCCC-CCcHHHHHHHHHHHHhCcChhHheEEe
Confidence 43444578999999999997 36654 45678899999986443 3442 222233333 444556763 33333
Q ss_pred chHHHHHHHhhCCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 231 GGAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 231 GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~--AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
|+...-.+|. .-|.||+|.==|..=+-. +++..+...-.+...+ .|.+=++| +++||.+..|.+++.
T Consensus 162 g~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lEl-gG~~~~iV--~~daDl~~aa~~i~~ 230 (431)
T cd07095 162 GGRETGEALA----AHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEM-GGNNPLVV--WDVADIDAAAYLIVQ 230 (431)
T ss_pred CcHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEEC-CCCCeEEE--CCCCCHHHHHHHHHH
Confidence 4444333333 358899988777753321 1211111000122232 26665544 556999998888774
No 35
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=78.65 E-value=80 Score=32.94 Aligned_cols=166 Identities=19% Similarity=0.191 Sum_probs=89.3
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
+...-.++.|+.-|++..|.- ||- ..++..+||-.||+.=|+- |+...-...-.+......+|.. .++.+ |
T Consensus 115 ~~~~~~~~~P~GvV~~i~p~N---~P~~~~~~~~~~ALaaGN~Vv~K--ps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g 189 (462)
T cd07112 115 DALALITREPLGVVGAVVPWN---FPLLMAAWKIAPALAAGNSVVLK--PAEQSPLTALRLAELALEAGLPAGVLNVVPG 189 (462)
T ss_pred CeEEEEEEeeeeeEEEECCCc---hHHHHHHHHHHHHHHcCCeeeee--CCCCCCHHHHHHHHHHHhcCCCCCcEEEEeC
Confidence 333345789999999999965 554 4566788999999974443 4321111111223334455543 22221 2
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
|.+.-..|. +-|.||+|+==|..=| .+|++.+- .|.+.+ |-.--+||-|+.+|.+..|.+++.
T Consensus 190 ~~~~~~~~l~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~----~~~lel--gG~n~~iV~~da~dl~~aa~~i~~ 259 (462)
T cd07112 190 FGHTAGEALG----LHMDVDALAFTGSTEVGRRFLEYSGQSNLK----RVWLEC--GGKSPNIVFADAPDLDAAAEAAAA 259 (462)
T ss_pred CCchHHHHHh----cCCCcCEEEEECCHHHHHHHHHHHHHhcCC----EEEecC--CCCCeEEECCCCcCHHHHHHHHHH
Confidence 444444442 3589999887776532 22211110 133333 333345555554499988877764
Q ss_pred hhccCC----CCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 QAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 QAEHdp----~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+=+.. .|. -++| .++.. ++..+.+.++++.+
T Consensus 260 ~~~~~~GQ~C~a~~~v~V--~~~v~-~~f~~~l~~~~~~~ 296 (462)
T cd07112 260 GIFWNQGEVCSAGSRLLV--HESIK-DEFLEKVVAAAREW 296 (462)
T ss_pred HHHhccCCCCCCCeeEEE--cHHHH-HHHHHHHHHHHhcC
Confidence 433322 122 3555 44455 77777777777654
No 36
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=77.82 E-value=90 Score=32.19 Aligned_cols=192 Identities=18% Similarity=0.180 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHh--ccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCC
Q 016315 130 FDVAYNNIYAFHLA--QKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPS 206 (391)
Q Consensus 130 i~~A~~nI~~FH~~--Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~ 206 (391)
+..++++++.|... .+.........+|.....++.|+.-|+++.|.- ||-.. +-..+||-.||.. |+.-|+.
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N---~P~~~~~~~~~~AL~aGN~--VIlKps~ 155 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWN---YPLMMAAWKIAPALAAGNT--VVLKPSE 155 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCC---cHHHHHHHHHHHHHHcCCE--EEEECCc
Confidence 45566666655432 122111111123444556789999999999974 56433 5567899999984 3344442
Q ss_pred CCCCCCHHHHHHHHHcCCc-chhhc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHH--HHHHh--cCCCCcccccC
Q 016315 207 QDGSICKEVLYCAKKAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMIL--QNSEAMISIDM 278 (391)
Q Consensus 207 ~~G~i~p~iLaAA~laGv~-eIy~v--G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~--AKr~v--~~~~g~VgID~ 278 (391)
........|+-+-..|+. .++.+ | |...-..|. +-|.+|+|+==|..-+-. +++.. +. .+-..+
T Consensus 156 -~~~~~~~~l~~~~~~glP~g~~~~v~g~~~~~~~~l~----~~~~v~~V~fTGs~~~g~~v~~~a~~~~~---~~~lel 227 (450)
T cd07092 156 -TTPLTTLLLAELAAEVLPPGVVNVVCGGGASAGDALV----AHPRVRMVSLTGSVRTGKKVARAAADTLK---RVHLEL 227 (450)
T ss_pred -cchHHHHHHHHHHHhcCCcccEEEeecCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcCC---cEEEEC
Confidence 111222233222222542 22221 2 222223332 357899988555543211 11110 11 133332
Q ss_pred CCCCcEEEEEecCCCCHHHHHHHHHhhhccC----CCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 279 PAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 279 ~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.|-+= +|-|++||.+..|-+++.-+=++ ..+...++. .++.. ++..+.+.++++.+
T Consensus 228 -gG~~p--~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V-~~~i~-~~f~~~l~~~~~~~ 287 (450)
T cd07092 228 -GGKAP--VIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYV-HESVY-DEFVAALVEAVSAI 287 (450)
T ss_pred -CCCCe--eEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEE-eHHHH-HHHHHHHHHHHhhC
Confidence 34443 45577899999888877644332 222233333 44455 66777776666554
No 37
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=77.39 E-value=85 Score=32.93 Aligned_cols=166 Identities=20% Similarity=0.216 Sum_probs=91.2
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc-
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v- 230 (391)
+|...-.+++|+.-|++..|.- ||- +.+...+||-.||..=|+- |+. ...... .+......+|.. .++.+
T Consensus 134 ~~~~~~~~~~P~GvV~~I~p~N---~P~~~~~~~~~~ALaaGN~VV~K--ps~-~~p~~~~~l~~~~~~aglP~gv~~~v 207 (484)
T cd07144 134 PNKLAYTLHEPYGVCGQIIPWN---YPLAMAAWKLAPALAAGNTVVIK--PAE-NTPLSLLYFANLVKEAGFPPGVVNII 207 (484)
T ss_pred CCceEEEEEecceEEEEECcCC---CHHHHHHHHHHHHHHcCCEEEEE--CCc-cchHHHHHHHHHHHHhCcCCCcEEEE
Confidence 3444557789999999999964 554 4566778999999865443 442 111111 233334555553 34433
Q ss_pred -c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 231 -G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 231 -G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
| |...-.+|. .-|.+|+|+==|..=+-.+ |..... .-.+-..+ -|-+ -+|-|++||.+..|..++.-+
T Consensus 208 ~g~~~~~~~~L~----~~~~vd~V~fTGS~~~g~~i~~~a~~~-~~~~~lEl-GGk~--p~iV~~dADl~~Aa~~i~~~~ 279 (484)
T cd07144 208 PGYGAVAGSALA----EHPDVDKIAFTGSTATGRLVMKAAAQN-LKAVTLEC-GGKS--PALVFEDADLDQAVKWAAAGI 279 (484)
T ss_pred ecCCchHHHHHh----cCCCcCEEEEECcHHHHHHHHHHHHhc-CCeEEEEc-CCCC--eEEECCCCCHHHHHHHHHHHH
Confidence 3 444333332 3578999988887665321 111100 00122333 2444 344466799998888776655
Q ss_pred ccCCC----Cc-eEEEecCchHHHHHHHHHHHHHHh
Q 016315 307 EHGPD----SQ-VVLVIVGDGVDLDAIEQEISKQCQ 337 (391)
Q Consensus 307 EHdp~----a~-aiLvT~s~~la~~~V~~ei~~ql~ 337 (391)
=.+.- |. -++| .++++ ++..+.+.++++
T Consensus 280 f~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~ 312 (484)
T cd07144 280 MYNSGQNCTATSRIYV--QESIY-DKFVEKFVEHVK 312 (484)
T ss_pred HhcCCCCCCCCceEEE--cHHHH-HHHHHHHHHHHH
Confidence 44432 22 2444 33455 666666666654
No 38
>PLN02278 succinic semialdehyde dehydrogenase
Probab=77.17 E-value=1e+02 Score=32.63 Aligned_cols=160 Identities=26% Similarity=0.329 Sum_probs=88.7
Q ss_pred EEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--c-h
Q 016315 159 CKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA--G-G 232 (391)
Q Consensus 159 ~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v--G-G 232 (391)
.-.++.|+.-|+++.|.- || ...++..+||-.||+.=|+- |.... .... .+......+|.. .++.+ | |
T Consensus 154 ~~~~~~P~GvV~~I~PwN---~P~~~~~~~i~~ALaaGN~VVlK--ps~~t-p~~~~~l~~~l~eaglP~gvv~~v~g~~ 227 (498)
T PLN02278 154 LLVLKQPVGVVGAITPWN---FPLAMITRKVGPALAAGCTVVVK--PSELT-PLTALAAAELALQAGIPPGVLNVVMGDA 227 (498)
T ss_pred EEEEeecccEEEEECCCc---cHHHHHHHHHHHHHHcCCEEEEE--CCCCC-hHHHHHHHHHHHHcCCCcccEEEEecCC
Confidence 334678999999999974 77 45566888999999974443 43211 1111 123334455653 33332 3 3
Q ss_pred HHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 233 AQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 233 AQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
...-.+|. +-|++|+|+==|..-+ .+|+.+ . .|...+ .|-+=+ |-|++||.+..|..++.-+
T Consensus 228 ~~~~~~L~----~~~~v~~V~fTGS~~~G~~i~~~aa~~~-~----~~~lEl-GGk~~~--iV~~dAdl~~aa~~i~~~~ 295 (498)
T PLN02278 228 PEIGDALL----ASPKVRKITFTGSTAVGKKLMAGAAATV-K----RVSLEL-GGNAPF--IVFDDADLDVAVKGALASK 295 (498)
T ss_pred hhhHHHHh----cCCCcCEEEEECcHHHHHHHHHHHhhcC-C----cEEEec-CCCCee--EECCCCCHHHHHHHHHHHH
Confidence 33333343 3488999887777543 222211 1 133332 344433 3456799999888877544
Q ss_pred ccCC----CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EHdp----~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+.. .| +-++|- +++. ++..+.+.+.++.+
T Consensus 296 f~~~GQ~C~a~~rv~V~--~~i~-~~f~~~L~~~~~~l 330 (498)
T PLN02278 296 FRNSGQTCVCANRILVQ--EGIY-DKFAEAFSKAVQKL 330 (498)
T ss_pred hccCCCCCcCCcEEEEe--HHHH-HHHHHHHHHHHHhc
Confidence 3333 12 234443 3455 66666666666555
No 39
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=76.88 E-value=99 Score=32.20 Aligned_cols=168 Identities=21% Similarity=0.223 Sum_probs=88.0
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCcc-hhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTH-ILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~e-Iy~v--G 231 (391)
|...-.++.|+.-|++..|. -||-.. +...+||-.+|+.=|+- |+...-...-.+..+...+|+.+ ++.+ |
T Consensus 110 ~~~~~~~~~P~GvV~~I~p~---N~P~~~~~~~i~~ALaaGN~Vi~K--ps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g 184 (454)
T cd07118 110 DMLGLVLREPIGVVGIITPW---NFPFLILSQKLPFALAAGCTVVVK--PSEFTSGTTLMLAELLIEAGLPAGVVNIVTG 184 (454)
T ss_pred CceeeEEeecceEEEEECCC---CcHHHHHHHHHHHHHhcCCEEEEE--CCCCCcHHHHHHHHHHHhcCCCccceEEEec
Confidence 33334577999999999996 467544 56677999999864443 43221111222333445566542 2221 2
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHH--HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh-c
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYV--TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA-E 307 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YV--t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA-E 307 (391)
|.+.-.+|. .-|++|+|.=-|..=+ ..+|+.-.. ...+... +.|-+ -+|-+++||.+..|-.++.=+ .
T Consensus 185 ~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~-~~~~~le-lgG~n--~~iV~~dAdl~~aa~~i~~~~f~ 256 (454)
T cd07118 185 YGATVGQAMT----EHPDVDMVSFTGSTRVGKAIAAAAARN-LKKVSLE-LGGKN--PQIVFADADLDAAADAVVFGVYF 256 (454)
T ss_pred CCchHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhc-CCcEEec-cCCCC--ceEECCCCCHHHHHHHHHHHHHh
Confidence 333333343 3578999844443211 111111000 0013333 22444 356667899999888877543 3
Q ss_pred cCC---CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 308 HGP---DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 308 Hdp---~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
|.. .| +-++| .++.. ++..+.+.++++.+
T Consensus 257 ~~GQ~C~a~~rv~V--~~~i~-d~f~~~L~~~~~~l 289 (454)
T cd07118 257 NAGECCNSGSRLLV--HESIA-DAFVAAVVARSRKV 289 (454)
T ss_pred ccCCCCCCCceEEE--cHHHH-HHHHHHHHHHHHhc
Confidence 322 12 23555 34455 67777776666554
No 40
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=76.19 E-value=99 Score=31.84 Aligned_cols=168 Identities=20% Similarity=0.269 Sum_probs=90.8
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
|...-.+++|+.-|+++.|.- ||- +.+..++||-.+|..=|+ . |+...-...-.+....+.+|.. .++.+ |
T Consensus 108 ~~~~~~~~~P~Gvv~~i~p~N---~P~~~~~~~~~~AL~aGN~VIl-K-ps~~~~~~~~~l~~~l~~aglP~g~v~~v~~ 182 (451)
T cd07103 108 GKRILVIKQPVGVVAAITPWN---FPAAMITRKIAPALAAGCTVVL-K-PAEETPLSALALAELAEEAGLPAGVLNVVTG 182 (451)
T ss_pred CcceEEEEeeceEEEEECCCc---hHHHHHHHHHHHHHHcCCEEEE-E-CCccCcHHHHHHHHHHHHcCCCcccEEEEec
Confidence 444456789999999999973 554 456678999999985333 3 4321111111233344455653 33332 2
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh-c
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA-E 307 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~--AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA-E 307 (391)
+...-..|. .-|.+|+|+=-|..-+-. +|..... ...+...+ -|-+ -+|-|++||.+..|..++.-+ .
T Consensus 183 ~~~~~~~~l~----~~~~vd~V~ftGs~~~g~~v~~~aa~~-~~~~~lel-gG~~--~~iV~~dadl~~aa~~i~~~~~~ 254 (451)
T cd07103 183 SPAEIGEALC----ASPRVRKISFTGSTAVGKLLMAQAADT-VKRVSLEL-GGNA--PFIVFDDADLDKAVDGAIASKFR 254 (451)
T ss_pred CchhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhc-CCcEEEEC-CCCC--eEEECCCCCHHHHHHHHHHHHHH
Confidence 322222232 247899988888765532 2222110 00144444 3555 345667899999888877422 2
Q ss_pred c---CCCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 308 H---GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 308 H---dp~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+ .-.+. -++| .++.. ++..+.+.+.++.+
T Consensus 255 ~~GQ~C~a~~~v~V--~~~i~-~~f~~~l~~~~~~~ 287 (451)
T cd07103 255 NAGQTCVCANRIYV--HESIY-DEFVEKLVERVKKL 287 (451)
T ss_pred hcCCCCCCCeeEEE--cHHHH-HHHHHHHHHHHHhc
Confidence 2 11222 3455 33455 66666666666554
No 41
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=75.56 E-value=1e+02 Score=32.64 Aligned_cols=168 Identities=19% Similarity=0.222 Sum_probs=90.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v-- 230 (391)
|.....+..|+.-|++..|.- ||-.. +...+||-.||+.=|+- |+... .... .+..+.+.+|+. .++.+
T Consensus 148 ~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VvlK--ps~~~-p~~~~~l~~~~~~aGlP~g~v~~v~ 221 (494)
T PRK09847 148 HELAMIVREPVGVIAAIVPWN---FPLLLTCWKLGPALAAGNSVILK--PSEKS-PLSAIRLAGLAKEAGLPDGVLNVVT 221 (494)
T ss_pred CceeEEEecceeEEEEECCCc---cHHHHHHHHHHHHHHcCCEEEEe--CCCCC-hHHHHHHHHHHHHcCcCcCcEEEEe
Confidence 333446789999999999964 66654 44567999999874443 43211 1122 233344556663 23322
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHh---cCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 231 G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v---~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
| |.....+|. +-|.+|+|+==|..=|- |++. +..+ ..-+=+-.|=.-.+||-|+.+|.+..|-.++.=+
T Consensus 222 g~~~~~~~~L~----~~~~vd~v~fTGs~~~g--~~v~~~aa~~~-~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~ 294 (494)
T PRK09847 222 GFGHEAGQALS----RHNDIDAIAFTGSTRTG--KQLLKDAGDSN-MKRVWLEAGGKSANIVFADCPDLQQAASATAAGI 294 (494)
T ss_pred CCChhHHHHHh----cCCCCCEEEEECCHHHH--HHHHHHhhhhC-CCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHH
Confidence 2 444445553 36889999888874322 2211 1000 0111122333345666666679987766554322
Q ss_pred ccCC----CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EHdp----~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=... .| .-++| .+++. ++..+.+.+.++.+
T Consensus 295 ~~~aGQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 329 (494)
T PRK09847 295 FYNQGQVCIAGTRLLL--EESIA-DEFLALLKQQAQNW 329 (494)
T ss_pred HhcCCCCCCCCcEEEE--cHHHH-HHHHHHHHHHHHhc
Confidence 2211 12 23555 44465 77777777766655
No 42
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=75.31 E-value=1.1e+02 Score=32.00 Aligned_cols=168 Identities=17% Similarity=0.183 Sum_probs=90.7
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc-
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v- 230 (391)
+|...-.++.|+.-|++..|. -||... +...+||-.||+.=|+ =|.. ...... .+......+|+. .++.+
T Consensus 126 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~i~~ALaaGN~Vvl--Kps~-~tp~~~~~l~~~l~~aGlP~gvv~~v 199 (478)
T cd07085 126 RGIDTYSYRQPLGVVAGITPF---NFPAMIPLWMFPMAIACGNTFVL--KPSE-RVPGAAMRLAELLQEAGLPDGVLNVV 199 (478)
T ss_pred CCceeEEEEecceEEEEECCC---ChHHHHHHHHHHHHHhcCCEEEE--ECCC-cCcHHHHHHHHHHHHhCCCCCcEEEE
Confidence 344456788999999999996 366433 5568899999996443 3432 111122 233344556653 44443
Q ss_pred -chHHHHHHHhhCCCCCCCceEEecCCcHHHHHHH-HHhcCCCC-cccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhc
Q 016315 231 -GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQNSEA-MISIDMPAGPSEVLVIADIYASPVHIAADLLSQAE 307 (391)
Q Consensus 231 -GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AK-r~v~~~~g-~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAE 307 (391)
|+.....+|. .-|.||+|.=-|..=|-.+= +.... ++ .| +=-+.|.+=++| +++||.+..|..++.-+=
T Consensus 200 ~g~~~~~~~L~----~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~-~lElgGk~p~iV--~~dADl~~aa~~i~~~~~ 271 (478)
T cd07085 200 HGGKEAVNALL----DHPDIKAVSFVGSTPVGEYIYERAAA-NGKRV-QALGGAKNHAVV--MPDADLEQTANALVGAAF 271 (478)
T ss_pred ecCHHHHHHHh----cCCCcCEEEEECCHHHHHHHHHHHhh-cCCcE-EecCCCCCceEE--CCCCCHHHHHHHHHHHHH
Confidence 4443333333 35779998877765433211 11110 00 01 111335444333 456999998877774443
Q ss_pred cCC----CCce-EEEecCchHHHHHHHHHHHHHHhcC
Q 016315 308 HGP----DSQV-VLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 308 Hdp----~a~a-iLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
... .+.. ++| . +++. ++..+.+.+.++.+
T Consensus 272 ~~~GQ~C~a~~rv~V-~-~~i~-~~f~~~L~~~~~~l 305 (478)
T cd07085 272 GAAGQRCMALSVAVA-V-GDEA-DEWIPKLVERAKKL 305 (478)
T ss_pred hcCCCCCCCCeEEEE-e-HHHH-HHHHHHHHHHHHhC
Confidence 322 2333 444 3 2355 77777777666654
No 43
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=75.07 E-value=1.1e+02 Score=31.93 Aligned_cols=169 Identities=19% Similarity=0.287 Sum_probs=91.8
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc-
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v- 230 (391)
+|...-..+.|+.-|++..|.- || +++++..+||-.||+.=| +-|+... .... .+..+...+|.. .++.+
T Consensus 125 ~~~~~~~~~~P~GVv~~I~P~N---~Pl~~~~~~i~~ALaaGN~VI--lKps~~~-p~~~~~l~~~~~~aGlP~gvv~vv 198 (473)
T cd07097 125 PGVEVETTREPLGVVGLITPWN---FPIAIPAWKIAPALAYGNTVV--FKPAELT-PASAWALVEILEEAGLPAGVFNLV 198 (473)
T ss_pred CCceEEEEEEeeeeEEEEcccC---hHHHHHHHHHHHHHHcCCEEE--EeCCCCC-cHHHHHHHHHHHHcCCCCcceEEe
Confidence 3545556789999999999964 66 445567889999998644 3344211 1112 223334455654 23332
Q ss_pred -c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh-
Q 016315 231 -G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA- 306 (391)
Q Consensus 231 -G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA- 306 (391)
| |...-.+|. +-|.+|+|.==|..-|-.+ .+........+...+ .|.+=++| +++||.+..|-.++.=+
T Consensus 199 ~g~~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lEl-GGk~~~iV--~~dadl~~aa~~i~~~~~ 271 (473)
T cd07097 199 MGSGSEVGQALV----EHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEM-GGKNPLVV--LDDADLDLAVECAVQGAF 271 (473)
T ss_pred ccCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEEC-CCCCeeEE--CCCCCHHHHHHHHHHHHH
Confidence 3 333333332 2388999877777655433 111111000133333 36664444 55689998777775332
Q ss_pred ---ccCCCCce-EEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 ---EHGPDSQV-VLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 ---EHdp~a~a-iLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=..-.+.. ++| . ++.. ++..+.+.++++.+
T Consensus 272 ~~~GQ~C~a~~rv~V-~-~~i~-d~f~~~l~~~~~~~ 305 (473)
T cd07097 272 FSTGQRCTASSRLIV-T-EGIH-DRFVEALVERTKAL 305 (473)
T ss_pred hccCCCCcCCeeEEE-e-hhHH-HHHHHHHHHHHHhC
Confidence 22223333 444 3 3455 77777777776554
No 44
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=73.98 E-value=1e+02 Score=31.80 Aligned_cols=195 Identities=15% Similarity=0.082 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHhcc--CCCceEEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCC
Q 016315 130 FDVAYNNIYAFHLAQK--SAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPS 206 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~--~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~ 206 (391)
+..+++.++.|.+.-. .........+|...-.++.|+.-|++..|.- ||- +.+...+||-.||+.=|+- |+.
T Consensus 61 i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N---~P~~~~~~~~~~ALaaGN~VVlK--ps~ 135 (432)
T cd07105 61 VDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWN---APVILGTRAIAYPLAAGNTVVLK--ASE 135 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCeecccCCCCceeEEEEecceEEEEECCcC---cHHHHHHHHHHHHHhcCCEEEEE--CCc
Confidence 5556666665554221 1111111123444556789999999999953 664 4555778999999864443 432
Q ss_pred CCCCCCHHHHHHHHHcCCc-chhhc--c----hHHHHHHHhhCCCCCCCceEEecCCcHHHHH--HHHHhcCCCCccccc
Q 016315 207 QDGSICKEVLYCAKKAGVT-HILKA--G----GAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISID 277 (391)
Q Consensus 207 ~~G~i~p~iLaAA~laGv~-eIy~v--G----GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~--AKr~v~~~~g~VgID 277 (391)
..-...-.+..+...+|.. .++.+ | |.+...+|. +-|.||+|+==|..=+-. +|...... -.|-.
T Consensus 136 ~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~-~~~~l- 209 (432)
T cd07105 136 LSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALI----AHPAVRKVNFTGSTRVGRIIAETAAKHL-KPVLL- 209 (432)
T ss_pred cChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcC-CeEEE-
Confidence 1111122334455667773 34332 2 223333343 257799887666654421 11111000 00111
Q ss_pred CCCCCcEEEEEecCCCCHHHHHHHHHhhhcc----CCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 278 MPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 278 ~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-+.|-+ -+|-|++||.+..|-+++.-+=+ .-.+...++.. ++.. ++..+.+.++++.+
T Consensus 210 ElgGk~--p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~-~~i~-~~f~~~l~~~~~~~ 271 (432)
T cd07105 210 ELGGKA--PAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVH-ESIA-DEFVEKLKAAAEKL 271 (432)
T ss_pred eCCCCC--ceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEc-HHHH-HHHHHHHHHHHHhh
Confidence 123333 34556779999888877744322 22233333333 3344 66666666655543
No 45
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=73.34 E-value=1.2e+02 Score=31.45 Aligned_cols=166 Identities=21% Similarity=0.262 Sum_probs=94.1
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc-
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v- 230 (391)
+|.....++.|+.-|++..|. -|| ...+...+||-.+|+.=|+- |.... .... .+..+.+.+|.. .++.+
T Consensus 107 ~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~VvlK--ps~~~-p~~~~~l~~~~~~aGlP~gv~~~v 180 (454)
T cd07109 107 PGYFVYTVREPHGVTGHIIPW---NYPLQITGRSVAPALAAGNAVVVK--PAEDA-PLTALRLAELAEEAGLPAGALNVV 180 (454)
T ss_pred CCceEEEEEeeeeEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--CCCCC-hHHHHHHHHHHHHcCcCccceEEE
Confidence 354566788999999999996 467 67777889999999975544 43211 1122 233445666764 33333
Q ss_pred -c-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHH
Q 016315 231 -G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 302 (391)
Q Consensus 231 -G-GAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDL 302 (391)
| |.....+|. +-|.+|+|.=-|..=+ ++||++. . +-.. +.|-+= +|-|++||.+..|.++
T Consensus 181 ~g~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~-p----~~lE-lgG~~~--~iV~~daDl~~Aa~~i 248 (454)
T cd07109 181 TGLGAEAGAALV----AHPGVDHISFTGSVETGIAVMRAAAENVV-P----VTLE-LGGKSP--QIVFADADLEAALPVV 248 (454)
T ss_pred ecCchHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhcCC-c----EEEE-CCCCCc--eEECCCCCHHHHHHHH
Confidence 3 555545555 4578998876666442 2233211 0 1111 224443 3446679999888887
Q ss_pred HhhhccCC----CCceEEEecCchHHHHHHHHHHHHHHhcCC
Q 016315 303 LSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP 340 (391)
Q Consensus 303 LaQAEHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~lp 340 (391)
+.-+=+.. .+...++. .++.. ++..+.+.+.++.+.
T Consensus 249 ~~~~~~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~~~ 288 (454)
T cd07109 249 VNAIIQNAGQTCSAGSRLLV-HRSIY-DEVLERLVERFRALR 288 (454)
T ss_pred HHHHHhccCCCCccCcEEEE-cHHHH-HHHHHHHHHHHHhCC
Confidence 75543332 22223333 33344 666666665555443
No 46
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=72.44 E-value=1.3e+02 Score=31.49 Aligned_cols=165 Identities=19% Similarity=0.279 Sum_probs=87.5
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v-- 230 (391)
+|.....++.|+.-|++..|.- +|+ .+.+...+||-.||+.=|+ -|+... .... .+..+...+|.. .++.+
T Consensus 124 ~~~~~~~~~~P~GvV~~I~p~N-~P~-~~~~~~~~~ALaaGN~Vil--Kps~~~-p~~~~~l~~~~~~aGlP~gv~~~v~ 198 (482)
T cd07119 124 PHVISRTVREPVGVCGLITPWN-YPL-LQAAWKLAPALAAGNTVVI--KPSEVT-PLTTIALFELIEEAGLPAGVVNLVT 198 (482)
T ss_pred CCceEEEEEeeeeeEEEEcCCc-hHH-HHHHHHHHHHHhcCCEEEE--ECCccc-cHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 4555668899999999999974 333 4455678899999997443 343211 1111 222333445553 33322
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHH
Q 016315 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 231 G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLL 303 (391)
| |.+.-.+|. .-|++|+|+=-|..-|- +|+.+ . .|...+- |-+=+ || +++||.+..+..++
T Consensus 199 g~~~~~~~~l~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~-~----~~~lElG-Gkn~~-iV-~~dADl~~Aa~~i~ 266 (482)
T cd07119 199 GSGATVGAELA----ESPDVDLVSFTGGTATGRSIMRAAAGNV-K----KVALELG-GKNPN-IV-FADADFETAVDQAL 266 (482)
T ss_pred cCcHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhcC-C----cEEEECC-CCCce-EE-CCCCCHHHHHHHHH
Confidence 3 333333333 35789999966664422 22221 0 1222221 43333 33 34699998777765
Q ss_pred hhh-ccC---CCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 304 SQA-EHG---PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 304 aQA-EHd---p~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.=+ .+. -.+. -++| .+++. ++..+.+.+.+..+
T Consensus 267 ~~~~~~~GQ~C~a~~~v~V--~~~i~-d~f~~~l~~~~~~~ 304 (482)
T cd07119 267 NGVFFNAGQVCSAGSRLLV--EESIH-DKFVAALAERAKKI 304 (482)
T ss_pred HHHHhcCCCCCCCCeEEEE--cHHHH-HHHHHHHHHHHHhc
Confidence 322 221 1122 3444 44455 66666666666554
No 47
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=72.36 E-value=1.1e+02 Score=31.84 Aligned_cols=240 Identities=13% Similarity=0.088 Sum_probs=119.8
Q ss_pred ChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-cCCCc
Q 016315 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVEN-VSELPDPELDAAVKEAFDVAYNNIYAFHLAQ-KSAET 149 (391)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs-~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q-~~~~~ 149 (391)
...+-.+.++.+.+.++++.|+=..-.++...+- +... ..|+ ...++.++.++++++++...+ ++...
T Consensus 40 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~~~~~ev------~~~i~~~~~~~~~~~~~~~~~~~~~~~ 109 (459)
T cd07089 40 DAEERARCLRQLHEALEARKEELRALLVAEVGAP----VMTARAMQV------DGPIGHLRYFADLADSFPWEFDLPVPA 109 (459)
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HHHHHHHHH------HHHHHHHHHHHHHHHHhcCceecCccc
Confidence 4445555666777777777665443333333211 1000 0011 134555666666666654333 12211
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-ch
Q 016315 150 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HI 227 (391)
Q Consensus 150 ~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eI 227 (391)
. ...+...-.++.|+.-|++..|. -|| ...+-..+||-.||+.=|+- |+...-...-.+....+.+|.. .+
T Consensus 110 ~--~~~~~~~~~~~~P~GVV~~I~P~---N~P~~~~~~~~~~AL~aGN~vvlK--ps~~~p~~~~~l~~~~~~aglP~g~ 182 (459)
T cd07089 110 L--RGGPGRRVVRREPVGVVAAITPW---NFPFFLNLAKLAPALAAGNTVVLK--PAPDTPLSALLLGEIIAETDLPAGV 182 (459)
T ss_pred c--cCCCceeEEEEeeccEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEEE--CCCCChHHHHHHHHHHHHcCCCccc
Confidence 0 11234445788999999999996 467 44455678999999874443 4321100111223334456653 23
Q ss_pred hhc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHH
Q 016315 228 LKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 302 (391)
Q Consensus 228 y~v--G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDL 302 (391)
+.+ | |...-.+|. .-|++|+|.==|..-+-.+ ++.-.. ...|-..+ .|-+=+ |-+++||.+..|-.+
T Consensus 183 ~~~v~g~~~~~~~~l~----~~~~~~~v~ftGs~~~g~~v~~~aa~~-~~~~~lel-gG~n~~--iV~~dadl~~aa~~i 254 (459)
T cd07089 183 VNVVTGSDNAVGEALT----TDPRVDMVSFTGSTAVGRRIMAQAAAT-LKRVLLEL-GGKSAN--IVLDDADLAAAAPAA 254 (459)
T ss_pred eEEEecCcHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhc-CCcEEEEC-CCCCee--EECCCCCHHHHHHHH
Confidence 322 3 333223332 3588999955555433221 111000 00133332 355533 444578999988888
Q ss_pred HhhhccCC----CCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 303 LSQAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 303 LaQAEHdp----~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+.-+=+.. .+. -++| .++.. ++..+.+.+.++.+
T Consensus 255 ~~~~~~~sGQ~C~a~~~v~V--~~~v~-~~f~~~l~~~~~~~ 293 (459)
T cd07089 255 VGVCMHNAGQGCALTTRLLV--PRSRY-DEVVEALAAAFEAL 293 (459)
T ss_pred HHHHHHhcCCcccCCeEEEE--cHHHH-HHHHHHHHHHHHhC
Confidence 86554432 222 3444 33455 66666666666554
No 48
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=71.31 E-value=1.5e+02 Score=31.56 Aligned_cols=158 Identities=23% Similarity=0.302 Sum_probs=85.8
Q ss_pred EEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCC-cchhhc--c-hHH
Q 016315 161 RVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGV-THILKA--G-GAQ 234 (391)
Q Consensus 161 qr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~-iLaAA~laGv-~eIy~v--G-GAQ 234 (391)
.++.|+.-|++..|. -|| +..++..+||-.||+.=|+ =|+. .-..... +......+|. ..++.+ | |..
T Consensus 154 ~~~~P~GVv~~I~p~---N~P~~~~~~~i~~ALaaGN~VIl--KPs~-~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~ 227 (496)
T PLN00412 154 TSKIPLGVVLAIPPF---NYPVNLAVSKIAPALIAGNAVVL--KPPT-QGAVAALHMVHCFHLAGFPKGLISCVTGKGSE 227 (496)
T ss_pred EEEecceEEEEECCC---CchHHHHHHHHHHHHHcCCEEEE--ECCc-cCcHHHHHHHHHHHHhCCCcccEEEEecCchH
Confidence 567899999999995 466 5567789999999986443 3332 1111222 2233344555 234332 3 344
Q ss_pred HHHHHhhCCCCCCCceEEecCCcHHHHHHHHHh---cCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCC
Q 016315 235 AISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPD 311 (391)
Q Consensus 235 AIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v---~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~ 311 (391)
.-.+|. .-|.||.|.=-|.. ..+++. +.. .|... +-|-+ -+|-|++||.+..|..++.-+=+...
T Consensus 228 ~~~~l~----~~~~v~~V~ftGs~---~g~~v~~~a~~~--~~~lE-lGG~~--p~iV~~dADl~~Aa~~i~~~~~~~~G 295 (496)
T PLN00412 228 IGDFLT----MHPGVNCISFTGGD---TGIAISKKAGMV--PLQME-LGGKD--ACIVLEDADLDLAAANIIKGGFSYSG 295 (496)
T ss_pred HHHHHh----cCCCcCEEEEeChH---HHHHHHHHhCCC--cEEEE-cCCCc--eEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 333343 45789988766662 223221 110 01111 11333 23446679999999888875544432
Q ss_pred ----Cc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 312 ----SQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 312 ----a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
|. -++| . +++. ++..+.+.+.++.+
T Consensus 296 Q~C~a~~rv~V-~-~~i~-d~f~~~l~~~~~~~ 325 (496)
T PLN00412 296 QRCTAVKVVLV-M-ESVA-DALVEKVNAKVAKL 325 (496)
T ss_pred CCCccCeEEEE-c-HHHH-HHHHHHHHHHHHhC
Confidence 22 3444 2 3354 66666665555554
No 49
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=70.32 E-value=89 Score=32.58 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=68.4
Q ss_pred EEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCC--cchhhc--ch
Q 016315 158 RCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV--THILKA--GG 232 (391)
Q Consensus 158 ~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv--~eIy~v--GG 232 (391)
..-.++.|+.-|+++.|.- ||. ..+..++||-.+|.. |++-|+...-...-.+....+.+|. +.++.+ |+
T Consensus 93 ~~~~~~~P~Gvv~~I~p~N---~P~~~~~~~~~~AL~aGN~--vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~ 167 (442)
T cd07084 93 QSHGYRWPYGPVLVIGAFN---FPLWIPLLQLAGALAMGNP--VIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGD 167 (442)
T ss_pred cceEEeecceeEEEEcCCc---cHhHHHHHHHHHHHHcCCe--EEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCC
Confidence 3446789999999999953 555 455568899999993 3344442211112223444455665 233332 32
Q ss_pred HHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCC-CHHHHHHHHHhh
Q 016315 233 AQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYA-SPVHIAADLLSQ 305 (391)
Q Consensus 233 AQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tA-nP~~VAaDLLaQ 305 (391)
.....+|. +-|.+|+|+=-|..=+... .+..... .|...+ .|-+=+ |-+++| |.+..+..++.-
T Consensus 168 ~~~~~~l~----~~~~v~~V~fTGs~~~g~~i~~~a~~~--~v~lEl-gG~~~~--iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 168 GKTMQALL----LHPNPKMVLFTGSSRVAEKLALDAKQA--RIYLEL-AGFNWK--VLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred cHHHHHHH----cCCCCCEEEEECCHHHHHHHHHhccCC--cEEEec-cCcCcE--EECCChhhHHHHHHHHHHH
Confidence 23333333 3577999994444322111 1111100 133332 455533 444556 567666555433
No 50
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=70.27 E-value=1.2e+02 Score=32.17 Aligned_cols=169 Identities=20% Similarity=0.203 Sum_probs=88.4
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc-
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v- 230 (391)
+|.....++.|+.-|+++.|. -|| ++.+...+||-.||+.=|+-.+| .. .... .+..+...+|.. .++.+
T Consensus 157 ~~~~~~~~~~P~GVV~~I~P~---N~P~~~~~~~i~~ALaaGN~VVlKPs~--~t-p~~~~~l~~~~~~aGlP~gvv~vv 230 (511)
T TIGR01237 157 EGETNRYFYQPRGVAVVISPW---NFPMAIAVGMTVAPIVTGNCVVLKPAE--TS-TVIAAKIVEILIEAGLPPGVFQFV 230 (511)
T ss_pred CCceeEEEEecceeEEEECCC---CcHHHHHHHHHHHHHHcCCEEEEECCC--CC-cHHHHHHHHHHHHhCCCCCcEEEc
Confidence 354556778999999999995 466 55667889999999964443332 11 1111 222334456653 23322
Q ss_pred --chHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCC-cccccCCCCCcEEEEEecCCCCHHHHHHH
Q 016315 231 --GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEA-MISIDMPAGPSEVLVIADIYASPVHIAAD 301 (391)
Q Consensus 231 --GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~~~~g-~VgID~~AGPSEvlVIAD~tAnP~~VAaD 301 (391)
.|...-.+|. +-|.+|+|.==|..-|- +|+...+..+. .|-. -+.|-+ -+|-|++||.+..|-.
T Consensus 231 ~g~~~~~~~~L~----~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~l-ElgG~~--p~iV~~dAdl~~aa~~ 303 (511)
T TIGR01237 231 PGKGSEVGSYLV----NHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIA-EMGGKD--AIIVDESADIEQAVAG 303 (511)
T ss_pred cCCCchhHHHHh----cCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEe-ccCCCC--eEEECCCCCHHHHHHH
Confidence 2444333343 34889998766665432 22100000000 0110 122333 3455567999988877
Q ss_pred HHhhhccCC----CCce-EEEecCchHHHHHHHHHHHHHHhcC
Q 016315 302 LLSQAEHGP----DSQV-VLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 302 LLaQAEHdp----~a~a-iLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
++.-+=... .|.. ++| . ++.. ++..+.+.+.++.+
T Consensus 304 i~~~~~~~~GQ~C~a~~rv~V-~-~~i~-d~f~~~L~~~~~~l 343 (511)
T TIGR01237 304 AVYSAFGFTGQKCSACSRVVV-L-SPVY-DAVVERFVEATRSL 343 (511)
T ss_pred HHHHHHhcCCCCcccceEEEE-e-hhHH-HHHHHHHHHHHHhC
Confidence 765443322 2323 444 3 3454 66666666555444
No 51
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=69.12 E-value=1.7e+02 Score=31.39 Aligned_cols=162 Identities=15% Similarity=0.124 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccC---CCceE-EecCceEEEEEEEecceeeEeecCCCCCCchHhhhh-ccceeecCCCeE
Q 016315 125 AVKEAFDVAYNNIYAFHLAQKS---AETSV-ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALML-SVPAQIAGCKTV 199 (391)
Q Consensus 125 ~~~~Ai~~A~~nI~~FH~~Q~~---~~~~~-~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~-aIPAkVAGV~~I 199 (391)
+.+.-+..++++++.|.+.... ..+.. ...+|...-.++.|+.-|++..|.- ||-.+.|. .+||-.||+.=|
T Consensus 98 ~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwN---fP~~l~~~~ia~ALaaGN~VV 174 (489)
T cd07126 98 QALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFN---FPLEIPALQLMGALFMGNKPL 174 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCc---hHHHHHHHHHHHHHHcCCEEE
Confidence 3444577788888877654321 11111 1122434445678999999999964 77655554 889999998644
Q ss_pred EEEcCCCCCCCCCHH-HHHHHHHcCC-cchhhc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHh---cCCC
Q 016315 200 VLATPPSQDGSICKE-VLYCAKKAGV-THILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNSE 271 (391)
Q Consensus 200 vv~TPP~~~G~i~p~-iLaAA~laGv-~eIy~v--G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v---~~~~ 271 (391)
+=|.. .-..... +......+|. +.++.+ | |. ...++. +=|+||+|.=-|..=| +|++. ++
T Consensus 175 --lKPSe-~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~-~~~~l~----~~~~v~~V~FTGS~~v--Gr~i~~~~g~-- 242 (489)
T cd07126 175 --LKVDS-KVSVVMEQFLRLLHLCGMPATDVDLIHSDGP-TMNKIL----LEANPRMTLFTGSSKV--AERLALELHG-- 242 (489)
T ss_pred --EECCC-CCCHHHHHHHHHHHHhCcCcCcEEEEeCCch-hHHHHh----cCCCCCEEEEECCHHH--HHHHHHHhCC--
Confidence 44432 1112222 3344556666 344443 4 44 344442 2378999965555333 23322 22
Q ss_pred CcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 272 AMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 272 g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
.+-+.+ .| -.-+|+.|+.+|.+.++.-++.
T Consensus 243 -k~~lEl-gg-~~~~IV~~Da~dld~a~~~~~~ 272 (489)
T cd07126 243 -KVKLED-AG-FDWKILGPDVSDVDYVAWQCDQ 272 (489)
T ss_pred -CEEeec-CC-CCceEECCCcccHHHHHHHHHH
Confidence 132211 22 2233454443377776655444
No 52
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=69.01 E-value=1.6e+02 Score=30.98 Aligned_cols=161 Identities=20% Similarity=0.226 Sum_probs=83.9
Q ss_pred eEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCc-chhh-c-c
Q 016315 157 VRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILK-A-G 231 (391)
Q Consensus 157 v~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~-iLaAA~laGv~-eIy~-v-G 231 (391)
.....++.|+.-|++..|. -||-. .+...+||-.||+.=|+ -|+. ....... +..+.+.+|.. .++. + |
T Consensus 134 ~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~i~~ALaaGN~Vvl--KPs~-~tp~~~~~l~~~~~~aglP~gvv~~v~g 207 (477)
T cd07113 134 YTAFTRREPVGVVAGIVPW---NFSVMIAVWKIGAALATGCTIVI--KPSE-FTPLTLLRVAELAKEAGIPDGVLNVVNG 207 (477)
T ss_pred ceEEEEEeecceEEEEcCC---ChHHHHHHHHHHHHHHcCCEEEE--ECCC-CCcHHHHHHHHHHHHcCcCCCcEEEEec
Confidence 3445678999999999996 47744 44566799999986444 4442 1111222 22334456653 2222 2 4
Q ss_pred hHHHHH-HHhhCCCCCCCceEEecCCcH----HH--HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 232 GAQAIS-AMAWGTESCPKVEKIFGPGNQ----YV--TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 232 GAQAIA-AlAYGTetIpkVDkIvGPGN~----YV--t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
+.. ++ +|. .-|.||+|.=-|.. .+ .+|+.+ . .+... +.|-+= +|-|++||.+..|-.++.
T Consensus 208 ~~~-~~~~L~----~~~~v~~V~fTGS~~~G~~i~~~aa~~~--~---~~~lE-lGGkn~--~iV~~dAdl~~aa~~i~~ 274 (477)
T cd07113 208 KGA-VGAQLI----SHPDVAKVSFTGSVATGKKIGRQAASDL--T---RVTLE-LGGKNA--AAFLKDADIDWVVEGLLT 274 (477)
T ss_pred Cch-HHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhhc--C---ceEee-cCCCCe--eEECCCCCHHHHHHHHHH
Confidence 233 33 232 24789999433332 12 222211 0 02122 122222 334567999998888774
Q ss_pred hh-ccCC---CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 QA-EHGP---DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 QA-EHdp---~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+ -+.- .| +-++| .+++. ++..+.+.+.++.+
T Consensus 275 ~~f~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 311 (477)
T cd07113 275 AGFLHQGQVCAAPERFYV--HRSKF-DELVTKLKQALSSF 311 (477)
T ss_pred HHHhhCCCCCcCCcEEEE--CHHHH-HHHHHHHHHHHHhC
Confidence 44 3322 22 23555 33455 66666666666554
No 53
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=66.74 E-value=1.7e+02 Score=30.66 Aligned_cols=167 Identities=16% Similarity=0.193 Sum_probs=92.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHc----CCc-chh
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKA----GVT-HIL 228 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~la----Gv~-eIy 228 (391)
|...-.++.|+.-|++..|. -||- ..+...+||-.||+.=| +-|+... .... .+....+.+ |+. .++
T Consensus 124 ~~~~~~~~~P~GVv~~I~pw---N~P~~~~~~~~~~ALaaGN~VI--lKps~~~-p~~~~~l~~~~~~al~~~glP~gvv 197 (478)
T cd07086 124 GHRLMEQWNPLGVVGVITAF---NFPVAVPGWNAAIALVCGNTVV--WKPSETT-PLTAIAVTKILAEVLEKNGLPPGVV 197 (478)
T ss_pred CceEEEEEecceeEEEECCC---CcHHHHHHHHHHHHHHcCCeEE--EECCCcc-hHHHHHHHHHHHHhhhccCCCccce
Confidence 43445678999999999996 4785 55668899999998644 4444211 1111 233344445 774 444
Q ss_pred hc--chHHHHHHHhhCCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 229 KA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 229 ~v--GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~--AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
.+ |+.. ++.+-- .-|.+|+|.==|..=+-. ++..... .+.+...+= |-+=++| |++||-+..|-.++.
T Consensus 198 ~~v~g~~~-~~~~L~---~~~~vd~v~fTGs~~~g~~i~~~aa~~-~~~~~lElG-G~~p~iV--~~dAdl~~Aa~~i~~ 269 (478)
T cd07086 198 NLVTGGGD-GGELLV---HDPRVPLVSFTGSTEVGRRVGETVARR-FGRVLLELG-GNNAIIV--MDDADLDLAVRAVLF 269 (478)
T ss_pred EEEecCch-hHHHHh---cCCCCCEEEEECcHHHHHHHHHHHhcc-CCcEEeecC-CCCcEEE--cCCCCHHHHHHHHHH
Confidence 43 4333 433221 246799887666654322 1211100 011444432 6664444 567899988877764
Q ss_pred hhccCC----CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 QAEHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 QAEHdp----~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+=+.. .| +-++| .++++ ++..+.+.+.++.+
T Consensus 270 ~~~~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 306 (478)
T cd07086 270 AAVGTAGQRCTTTRRLIV--HESVY-DEFLERLVKAYKQV 306 (478)
T ss_pred HHHhccCCCCcCCeEEEE--cHHHH-HHHHHHHHHHHHhC
Confidence 433332 12 23444 44465 77777777776654
No 54
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=66.71 E-value=1.7e+02 Score=30.46 Aligned_cols=159 Identities=21% Similarity=0.260 Sum_probs=86.2
Q ss_pred EEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCc-chhhc--c-
Q 016315 158 RCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA--G- 231 (391)
Q Consensus 158 ~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~-iLaAA~laGv~-eIy~v--G- 231 (391)
....++.|+.-|++..|. -|| +..+...+||-.||+.=|+ -|+.. -..... +......+|.. .++.+ |
T Consensus 111 ~~~~~~~P~GvV~~I~p~---N~P~~~~~~~~~~ALaaGN~vvl--Kps~~-~p~~~~~l~~~~~~aglP~gv~~~v~g~ 184 (454)
T cd07101 111 RTTVNRRPKGVVGVISPW---NYPLTLAVSDAIPALLAGNAVVL--KPDSQ-TALTALWAVELLIEAGLPRDLWQVVTGP 184 (454)
T ss_pred eEEEEEEeccEEEEECCC---ccHHHHHHHHHHHHHHcCCEEEE--ECCcc-chHHHHHHHHHHHHcCcCCCcEEEEeCC
Confidence 455788999999999996 366 5567788999999987554 34421 111112 23333455542 23222 2
Q ss_pred hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhh
Q 016315 232 GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 305 (391)
Q Consensus 232 GAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQ 305 (391)
|.....+|.= .+|+|.==|..-+- +|+++.. |... +.|-+ -+|-|++||.+..+..++.=
T Consensus 185 ~~~~~~~l~~------~~~~V~fTGs~~~g~~i~~~aa~~~~~-----~~lE-lgG~~--p~iV~~dAdl~~a~~~i~~~ 250 (454)
T cd07101 185 GSEVGGAIVD------NADYVMFTGSTATGRVVAERAGRRLIG-----CSLE-LGGKN--PMIVLEDADLDKAAAGAVRA 250 (454)
T ss_pred cHHHHHHHHh------CCCEEEEECCHHHHHHHHHHHHhcCCc-----EEEE-CCCCc--eEEECCCCCHHHHHHHHHHH
Confidence 4455555552 24667666665442 2222110 1111 33444 34445679999887766543
Q ss_pred hccCC----CCce-EEEecCchHHHHHHHHHHHHHHhcC
Q 016315 306 AEHGP----DSQV-VLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 306 AEHdp----~a~a-iLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+=... .+.. ++| .++.+ ++..+.+.+.++.+
T Consensus 251 ~~~~sGQ~C~a~~rv~V--~~~i~-d~f~~~L~~~~~~~ 286 (454)
T cd07101 251 CFSNAGQLCVSIERIYV--HESVY-DEFVRRFVARTRAL 286 (454)
T ss_pred HHhcCCCCcccCeEEEE--cHHHH-HHHHHHHHHHHhhC
Confidence 32221 1222 444 44565 77777777776655
No 55
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=66.53 E-value=1.2e+02 Score=31.23 Aligned_cols=220 Identities=11% Similarity=0.137 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHhccCC-Cc--eEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCC
Q 016315 129 AFDVAYNNIYAFHLAQKSA-ET--SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPP 205 (391)
Q Consensus 129 Ai~~A~~nI~~FH~~Q~~~-~~--~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP 205 (391)
-++.++++++.|.+.-... .. ......|...-.++.|+.-|++..|. +|...++.++||-.||+.=| .-|+
T Consensus 70 ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~p~~~~~~~~~ALaaGN~vV--lKps 143 (406)
T cd07079 70 RIEAMAEGLRQVAALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES----RPNVTVDAAALCLKSGNAVI--LRGG 143 (406)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccceeccCccceeEEecceEEEEEecCC----CcchHHHHHHHHHHhCCEEE--EeCC
Confidence 3666777777665321110 00 00111233344678999999999992 46677788999999998644 4343
Q ss_pred CCCCCCCHHHHH-----HHHHcCCc-chhh-c-c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcc
Q 016315 206 SQDGSICKEVLY-----CAKKAGVT-HILK-A-G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMI 274 (391)
Q Consensus 206 ~~~G~i~p~iLa-----AA~laGv~-eIy~-v-G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~V 274 (391)
. .-......++ +++.+|.. .++. + | |...++.+- .+=|.||+|.=-|+.=|-.. ++. .. .|
T Consensus 144 ~-~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l---~~~~~v~~i~fTGS~~~G~~i~~~a-~~---pv 215 (406)
T cd07079 144 S-EALHSNRALVEIIQEALEEAGLPEDAVQLIPDTDREAVQELL---KLDDYIDLIIPRGGAGLIRFVVENA-TI---PV 215 (406)
T ss_pred c-hhhhHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHH---cCCCCccEEEeCCCHHHHHHHHHhc-CC---CE
Confidence 2 1112222222 11245553 3332 2 3 443444421 13477999987777533221 111 11 01
Q ss_pred cccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCCCce-----EEEecCchHHHHHHHHHHHHHHhcCC-------c-
Q 016315 275 SIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQV-----VLVIVGDGVDLDAIEQEISKQCQSLP-------R- 341 (391)
Q Consensus 275 gID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~a~a-----iLvT~s~~la~~~V~~ei~~ql~~lp-------r- 341 (391)
+==+-|-+=++| |++||.+..|..++-=+=.... .| ++| .+++. +++.+.+.+.++.+. +
T Consensus 216 -~lELGGk~p~IV--~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V--~~si~-d~f~~~l~~~~~~~ga~~~~g~~~ 288 (406)
T cd07079 216 -IKHGDGNCHVYV--DESADLEMAVRIVVNAKTQRPS-VCNALETLLV--HRDIA-EEFLPKLAEALREAGVELRGDEET 288 (406)
T ss_pred -EeecCCcceEEE--eCCCCHHHHHHHHHHcccCCCc-ccccceeEEE--eHHHH-HHHHHHHHHHHHHCCCEEecCHHH
Confidence 111345554433 5569999988887755533222 22 333 33454 666666555555442 1
Q ss_pred HHHHHH-------Hhh---CC---eEEEECCHHHHHhccch
Q 016315 342 GEFASK-------ALG---HS---FMVFARDMLEVSQEFPS 369 (391)
Q Consensus 342 ~~ia~~-------sl~---~g---~iivv~sleeAi~~an~ 369 (391)
..+... -+. .| .++-++|+|||++++|.
T Consensus 289 ~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~ 329 (406)
T cd07079 289 LAILPGAKPATEEDWGTEYLDLILAVKVVDSLDEAIAHINR 329 (406)
T ss_pred HHhcccccCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHH
Confidence 111111 111 13 45668999999999984
No 56
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=65.87 E-value=1.7e+02 Score=30.41 Aligned_cols=162 Identities=19% Similarity=0.252 Sum_probs=86.3
Q ss_pred EEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--c-hHH
Q 016315 161 RVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA--G-GAQ 234 (391)
Q Consensus 161 qr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v--G-GAQ 234 (391)
.+++|+.-|++..|.- || ++.+...+||-.+|..=|+ -|+... .... .+..+...+|.. .++.+ | |..
T Consensus 126 ~~~~P~GVv~~I~p~N---~P~~~~~~~~~~ALaaGN~Vv~--Kps~~~-p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~ 199 (466)
T cd07138 126 VVREPIGVCGLITPWN---WPLNQIVLKVAPALAAGCTVVL--KPSEVA-PLSAIILAEILDEAGLPAGVFNLVNGDGPV 199 (466)
T ss_pred EEEeecceEEEECCCc---cHHHHHHHHHHHHHhcCCEEEE--ECCCcC-cHHHHHHHHHHHHcCCCCCcEEEEeCCchh
Confidence 3679999999999964 66 6777788999999986544 444211 1122 233344566653 34333 3 433
Q ss_pred HHHHHhhCCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCC--
Q 016315 235 AISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGP-- 310 (391)
Q Consensus 235 AIAAlAYGTetIpkVDkIvGPGN~YVt~--AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp-- 310 (391)
.-.+|. .-|.+|+|.==|..-|-. +|.. +.....|...+- |.+=+ |-|++||.+..|-.++.-+=...
T Consensus 200 ~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~a-a~~~~~v~lElg-G~~p~--iV~~dADl~~aa~~i~~~~~~~~GQ 271 (466)
T cd07138 200 VGEALS----AHPDVDMVSFTGSTRAGKRVAEAA-ADTVKRVALELG-GKSAN--IILDDADLEKAVPRGVAACFANSGQ 271 (466)
T ss_pred HHHHHh----cCCCCCEEEEECcHHHHHHHHHHH-hccCCeEEEECC-CCCee--EECCCCCHHHHHHHHHHHHHhccCC
Confidence 223333 347889885444443221 1111 000001333322 55533 34456899987776654332221
Q ss_pred ---CCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 311 ---DSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 311 ---~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
..+-++| .++.+ ++..+.+.++++.+
T Consensus 272 ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 300 (466)
T cd07138 272 SCNAPTRMLV--PRSRY-AEAEEIAAAAAEAY 300 (466)
T ss_pred CCcCCcEEEE--eHhHH-HHHHHHHHHHHHhc
Confidence 1223555 34455 66667676666554
No 57
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=65.20 E-value=1.8e+02 Score=30.33 Aligned_cols=167 Identities=16% Similarity=0.144 Sum_probs=90.1
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
+...-.++.|+.-|++..|.- ||-.. +...+||-.+|+.=|+- |+...-...-.+..+.+.+|+. .++.+ |
T Consensus 111 ~~~~~~~~~P~Gvv~~I~P~N---~P~~~~~~~~~~ALaaGN~VilK--ps~~~p~~~~~l~~~l~~aglP~g~v~~v~g 185 (451)
T cd07146 111 ARKIFTLREPLGVVLAITPFN---HPLNQVAHKIAPAIAANNRIVLK--PSEKTPLSAIYLADLLYEAGLPPDMLSVVTG 185 (451)
T ss_pred CceEEEEEeccceEEEEccCC---hHHHHHHHHHHHHHHcCCEEEEE--CCCCchHHHHHHHHHHHHcCcCccceEEEec
Confidence 333446788999999999974 45433 45668999999874443 4321111112233344556663 33332 4
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccC
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG 309 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHd 309 (391)
|...-.+|. +-|.+|+|+=-|..=+-.+ .+..+.. .+...+ .|-+=+ |-|++||.+..+..++.-+=+.
T Consensus 186 ~~~~~~~~l~----~~~~i~~V~fTGs~~~g~~i~~~a~~~--~~~lEl-GG~~p~--iV~~daDl~~aa~~i~~~~~~~ 256 (451)
T cd07146 186 EPGEIGDELI----THPDVDLVTFTGGVAVGKAIAATAGYK--RQLLEL-GGNDPL--IVMDDADLERAATLAVAGSYAN 256 (451)
T ss_pred CchHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHhcCC--ceeeec-CCCceE--EECCCCCHHHHHHHHHHHHHhh
Confidence 344333343 3578999966665433221 1111110 133433 465544 4456789999887776444333
Q ss_pred C----CCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 310 P----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 310 p----~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
. .+. -++| .++.. +++.+.+.++++.+
T Consensus 257 ~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~l 288 (451)
T cd07146 257 SGQRCTAVKRILV--HESVA-DEFVDLLVEKSAAL 288 (451)
T ss_pred CCCCCCCCceEEE--chHHH-HHHHHHHHHHHhcC
Confidence 2 222 3444 44455 67777777776665
No 58
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=64.45 E-value=1.8e+02 Score=30.13 Aligned_cols=162 Identities=19% Similarity=0.201 Sum_probs=88.1
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--c-h
Q 016315 158 RCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA--G-G 232 (391)
Q Consensus 158 ~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v--G-G 232 (391)
..-.++.|+.-|+++.|.- +|+ ++.++..+||-.||+.=|+-.+|-. .... .+....+.+|+. .++.+ | |
T Consensus 116 ~~~~~~~P~GVv~~I~p~N-~P~-~~~~~~~~~ALaaGN~VV~Kps~~~---p~~~~~l~~~~~~ag~p~g~~~~v~g~~ 190 (456)
T cd07145 116 IAFTVREPIGVVGAITPFN-FPA-NLFAHKIAPAIAVGNSVVVKPSSNT---PLTAIELAKILEEAGLPPGVINVVTGYG 190 (456)
T ss_pred eeEEEEecceeEEEECCCC-hHH-HHHHHHHHHHHHcCCEEEEECCccc---hHHHHHHHHHHHHcCCCcccEEEEeCCC
Confidence 3446678999999999973 333 3345677899999986444333321 1112 233344555664 44433 3 4
Q ss_pred HHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 233 AQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 233 AQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
...-.+|. +-|.+|+|+=-|..=| .+|+.+ . .|-.. +.|-+=++ -|++||.+.+|-.++.=+
T Consensus 191 ~~~~~~l~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~--~---~v~lE-lgG~n~~i--V~~dAdl~~aa~~i~~~~ 258 (456)
T cd07145 191 SEVGDEIV----TNPKVNMISFTGSTAVGLLIASKAGGTG--K---KVALE-LGGSDPMI--VLKDADLERAVSIAVRGR 258 (456)
T ss_pred chHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhcC--C---ceEEe-cCCCCeeE--ECCCCCHHHHHHHHHHHH
Confidence 44333443 3488999866665543 222111 1 02222 33555333 345689998887776322
Q ss_pred ----ccCCCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 ----EHGPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 ----EHdp~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+...|. -++| .+++. ++..+.+.++++.+
T Consensus 259 f~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 293 (456)
T cd07145 259 FENAGQVCNAVKRILV--EEEVY-DKFLKLLVEKVKKL 293 (456)
T ss_pred HhccCCCCccCeeEEE--cHHHH-HHHHHHHHHHHhcC
Confidence 1122232 3444 44565 77777777777665
No 59
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=62.85 E-value=2e+02 Score=30.00 Aligned_cols=168 Identities=18% Similarity=0.198 Sum_probs=91.1
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhh--cc
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILK--AG 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~--vG 231 (391)
|...-.++.|+.-|++..|.- ||- ..+...+||-.+|..=|+ -|....-...-.+..+...+|.. .++. .|
T Consensus 128 ~~~~~~~~~P~Gvv~~I~p~N---~P~~~~~~~i~~ALaaGN~Vvl--Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g 202 (471)
T cd07139 128 GGHVLVRREPVGVVAAIVPWN---APLFLAALKIAPALAAGCTVVL--KPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA 202 (471)
T ss_pred CceEEEEEEeccEEEEEcCCc---hHHHHHHHHHHHHHhcCCEEEE--ECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC
Confidence 444557889999999999953 664 445568899999987443 34322211222334445566664 2333 25
Q ss_pred hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccC
Q 016315 232 GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG 309 (391)
Q Consensus 232 GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHd 309 (391)
|...-.+|. +-|.+|+|.=-|..-+-.. |..-.. --.+... +.|-+=.+| +++||.+.+|-+++.-+=+.
T Consensus 203 ~~~~~~~l~----~~~~i~~v~ftGs~~~g~~v~~~~~~~-~~~~~lE-lGG~np~iV--~~dADl~~aa~~i~~~~~~~ 274 (471)
T cd07139 203 DREVGEYLV----RHPGVDKVSFTGSTAAGRRIAAVCGER-LARVTLE-LGGKSAAIV--LDDADLDAAVPGLVPASLMN 274 (471)
T ss_pred CHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhc-CCEEEEE-cCCCCeeEE--CCCCCHHHHHHHHHHHHHhc
Confidence 554333343 3578998877777665332 211110 0002222 225443333 34689999888886544332
Q ss_pred ----CCC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 310 ----PDS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 310 ----p~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-.| +-++|-. ++. +++.+.+.+.++.+
T Consensus 275 ~GQ~C~a~~~v~V~~--~i~-d~f~~~l~~~~~~~ 306 (471)
T cd07139 275 NGQVCVALTRILVPR--SRY-DEVVEALAAAVAAL 306 (471)
T ss_pred CCCCCcCCcEEEEeH--hHH-HHHHHHHHHHHHhC
Confidence 222 2355533 355 66666666655444
No 60
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=62.53 E-value=2.2e+02 Score=30.38 Aligned_cols=171 Identities=19% Similarity=0.231 Sum_probs=84.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
|.....++.|+.-|+++.|- -||- +.+...+||-.||+. |++-|+...-...-.+..+...+|.. .++.+ |
T Consensus 158 g~~~~~~~~P~GVV~~I~p~---N~P~~~~~~~i~~ALaaGN~--VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g 232 (518)
T cd07125 158 GELNGLELHGRGVFVCISPW---NFPLAIFTGQIAAALAAGNT--VIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPG 232 (518)
T ss_pred CceeEEEEecccEEEEECCc---chHHHHHHHHHHHHHHcCCE--EEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEec
Confidence 44456778999999999884 4665 446788899999997 33444421111111233344456664 22221 2
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHH--HHHHHHhcCCCCcc-cccCCCCCcEEEEEecCCCCHHHHHHHHHhhhc
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYV--TAAKMILQNSEAMI-SIDMPAGPSEVLVIADIYASPVHIAADLLSQAE 307 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YV--t~AKr~v~~~~g~V-gID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAE 307 (391)
|...-.+|. +-|.+|+|.==|..=+ ..++.........+ -+=-+.|-+= +|-|++||.+..|-.++.-+=
T Consensus 233 ~~~~~~~~L~----~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p--~iV~~dADl~~Aa~~iv~g~f 306 (518)
T cd07125 233 DGEEIGEALV----AHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNA--MIVDSTALPEQAVKDVVQSAF 306 (518)
T ss_pred CchhhHHHHh----cCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCe--EEECCCCCHHHHHHHHHHHHH
Confidence 333333343 2488999944443222 11121110000000 0111334443 444567899887766654322
Q ss_pred cC----CCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 308 HG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 308 Hd----p~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.. -.|...++. .++.+ ++..+.+.+.++.+
T Consensus 307 ~nsGQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~ 340 (518)
T cd07125 307 GSAGQRCSALRLLYL-QEEIA-ERFIEMLKGAMASL 340 (518)
T ss_pred hcCCCCCCCCeEEEE-cchhH-HHHHHHHHHHHhcC
Confidence 22 223333333 33355 66666666665554
No 61
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=61.72 E-value=3.3e+02 Score=32.20 Aligned_cols=170 Identities=21% Similarity=0.279 Sum_probs=91.6
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
|...--+++|+.-|++..|. -||-.. +...+||-.||.. |++-|....-.+.-.+....+.+|+- .++.+ |
T Consensus 675 ge~n~~~~~P~GVv~~IsPw---NfPlai~~~~i~aALaaGNt--VIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G 749 (1038)
T PRK11904 675 GESNELRLHGRGVFVCISPW---NFPLAIFLGQVAAALAAGNT--VIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPG 749 (1038)
T ss_pred CceeEEEEecceEEEEECCC---ccHHHHHHHHHHHHHHcCCE--EEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeC
Confidence 44555678999999999995 477555 4566799999976 44445422111111223344556663 22221 2
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCc-c-cccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAM-I-SIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~-V-gID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
|...-.+|. +-|+||.|.=-|..=|... +++.... |. + -|==.-|-+ .+|-|++||++.++.|++.=|
T Consensus 750 ~g~~vg~~Lv----~~p~v~~V~FTGS~~~g~~I~~~~A~~~-g~~~pvi~ElGGkN--a~IV~~dAdld~Av~~iv~sa 822 (1038)
T PRK11904 750 DGATVGAALT----ADPRIAGVAFTGSTETARIINRTLAARD-GPIVPLIAETGGQN--AMIVDSTALPEQVVDDVVTSA 822 (1038)
T ss_pred CchHHHHHHh----cCCCcCeEEEECCHHHHHHHHHHHhhcc-CCCceEEEEcCCcC--eEEECCCCCHHHHHHHHHHHH
Confidence 333223333 3588999887777554332 2121110 00 0 011112333 355688999999999987433
Q ss_pred ccCC----CCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=... .|...|+. .++++ +++.+.+...++.+
T Consensus 823 F~~aGQ~CsA~~rl~V-~~si~-d~fl~~L~~~~~~l 857 (1038)
T PRK11904 823 FRSAGQRCSALRVLFV-QEDIA-DRVIEMLKGAMAEL 857 (1038)
T ss_pred HhCCCCccccCcEEEE-eHHHH-HHHHHHHHHHHHhc
Confidence 2221 22223333 34566 77777777766655
No 62
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=61.57 E-value=2.1e+02 Score=29.98 Aligned_cols=167 Identities=17% Similarity=0.192 Sum_probs=93.9
Q ss_pred eEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCC-cchhhc--c
Q 016315 157 VRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGV-THILKA--G 231 (391)
Q Consensus 157 v~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~-iLaAA~laGv-~eIy~v--G 231 (391)
.....++.|+.-|++..|.- ||-.. +...+||-.+|+.=| +-|+... ..... +..+.+.+|. +.++.+ |
T Consensus 137 ~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~~~~ALaaGN~VV--lKps~~~-p~~~~~l~~~l~~aGlP~gvv~~v~g 210 (481)
T cd07141 137 FFTYTRHEPVGVCGQIIPWN---FPLLMAAWKLAPALACGNTVV--LKPAEQT-PLTALYLASLIKEAGFPPGVVNVVPG 210 (481)
T ss_pred ceEEEEEeceeEEEEEccCh---hHHHHHHHHHHHHHHcCCEEE--EeCCCCC-cHHHHHHHHHHHHcCcCccceEEEec
Confidence 34456788999999999964 77655 667889999999533 4444221 12222 2344455666 344443 3
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcC-CCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhcc
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQN-SEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH 308 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~-~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEH 308 (391)
|...-.+|. +-|.||+|.==|..=+-.. .+..+. .-..|...+ -|-+=+ |-+++||.+..+..++.=+=.
T Consensus 211 ~~~~~~~~L~----~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lEl-GG~~~~--iV~~dADl~~A~~~i~~~~~~ 283 (481)
T cd07141 211 YGPTAGAAIS----SHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLEL-GGKSPN--IVFADADLDYAVEQAHEALFF 283 (481)
T ss_pred CchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEc-CCCCeE--EECCCCCHHHHHHHHHHHHHh
Confidence 444334443 3588999987777544322 111111 000133444 366544 445678999988777643322
Q ss_pred CCC----Cc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 309 GPD----SQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 309 dp~----a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
... |. -++| .++.. +++.+.+.+.++.+
T Consensus 284 ~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~ 316 (481)
T cd07141 284 NMGQCCCAGSRTFV--QESIY-DEFVKRSVERAKKR 316 (481)
T ss_pred cCCCcccCCeEEEE--cHHHH-HHHHHHHHHHHHhC
Confidence 221 22 2444 44566 77777777666554
No 63
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=61.24 E-value=13 Score=40.57 Aligned_cols=48 Identities=25% Similarity=0.330 Sum_probs=36.2
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|.++|++.|+.-+..---++..||.++|.+.+.-+--..| ||++||..
T Consensus 141 v~~aVITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtA-AAlay~~~ 188 (595)
T PRK01433 141 ITKAVITVPAHFNDAARGEVMLAAKIAGFEVLRLIAEPTA-AAYAYGLN 188 (595)
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCcHH-HHHHHhcc
Confidence 5677777777532222337999999999998888888877 77999975
No 64
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=59.21 E-value=2.2e+02 Score=29.38 Aligned_cols=165 Identities=20% Similarity=0.210 Sum_probs=91.0
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v-- 230 (391)
.|.....++.|+.-|+++.|. -||- +.++.++||-.+|..=|+- |+...-...-.+..+.+.+|.. .++.+
T Consensus 107 ~~~~~~~~~~P~GVv~~i~p~---N~P~~~~~~~~~~AL~aGN~VIlk--ps~~~p~~~~~l~~~l~~aglP~g~v~~v~ 181 (455)
T cd07093 107 GGALNYVLRQPVGVAGLITPW---NLPLMLLTWKIAPALAFGNTVVLK--PSEWTPLTAWLLAELANEAGLPPGVVNVVH 181 (455)
T ss_pred CCceEEEEEEeeeEEEEECCC---ChHHHHHHHHHHHHHhcCCEEEeE--CCCcCcHHHHHHHHHHHhcCCCccceEEEe
Confidence 355556788999999999994 4674 4566788999999864433 4322111112233444556653 23332
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHH
Q 016315 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 231 G-GAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLL 303 (391)
| |...-.+|. .-|.+|+|+=-|..=+ ++||.+ . .+-.. +.|.+=+ |-|++||.+..+.+++
T Consensus 182 g~~~~~~~~L~----~~~~i~~V~ftGs~~~g~~v~~~aa~~~--~---~~~le-lgG~~~~--iV~~dAdl~~a~~~i~ 249 (455)
T cd07093 182 GFGPEAGAALV----AHPDVDLISFTGETATGRTIMRAAAPNL--K---PVSLE-LGGKNPN--IVFADADLDRAVDAAV 249 (455)
T ss_pred cCchHHHHHHh----cCCCccEEEEECCHHHHHHHHHHHhhcc--c---ceEee-cCCCCce--EECCCCCHHHHHHHHH
Confidence 2 344334453 3578998776666322 222211 1 02222 2355533 3456799999887777
Q ss_pred hhhccC----CCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 304 SQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 304 aQAEHd----p~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.-+=.. -.+. .++| .++.+ ++..+.+.+.++.+
T Consensus 250 ~~~~~~~GQ~C~a~~~v~v--~~~i~-d~f~~~l~~~~~~~ 287 (455)
T cd07093 250 RSSFSNNGEVCLAGSRILV--QRSIY-DEFLERFVERAKAL 287 (455)
T ss_pred HHHHhccCCCcCCCceEEE--cHHHH-HHHHHHHHHHHHhC
Confidence 544222 1222 3444 44455 77777777776654
No 65
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=58.78 E-value=17 Score=39.10 Aligned_cols=48 Identities=19% Similarity=0.264 Sum_probs=34.8
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|+++|++.|+.-+-.---+++.||.++|.+.+--+=-..| ||++||..
T Consensus 130 v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptA-AAl~y~~~ 177 (595)
T TIGR02350 130 VTEAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTA-AALAYGLD 177 (595)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecchHH-HHHHHhhc
Confidence 5677888887533222347899999999987777776766 56899975
No 66
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=57.75 E-value=2.3e+02 Score=29.21 Aligned_cols=164 Identities=23% Similarity=0.279 Sum_probs=89.4
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCH-HHH-HHHHHcCCc-chhhc
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVL-YCAKKAGVT-HILKA 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iL-aAA~laGv~-eIy~v 230 (391)
.|...-.++.|+.-|++..|.- ||-.. +...+||-.||+.=|+--+|-. .... .+| .+...+|+. .++.+
T Consensus 100 ~g~~~~~~~~P~Gvv~~i~p~N---~P~~~~~~~~~~ALaaGN~VvlKps~~~---p~~~~~~l~~~~~~ag~P~gvv~~ 173 (443)
T cd07152 100 PGRLSLARRVPLGVVGVISPFN---FPLILAMRSVAPALALGNAVVLKPDPRT---PVSGGVVIARLFEEAGLPAGVLHV 173 (443)
T ss_pred CCceeEEEEecceEEEEECCCC---cHHHHHHHHHHHHHHcCCEEEEECCccc---chhHHHHHHHHHHHhCcCcCcEEE
Confidence 4555556889999999999953 55433 4467899999997554433311 1122 122 455566663 33322
Q ss_pred --chHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHH
Q 016315 231 --GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 302 (391)
Q Consensus 231 --GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDL 302 (391)
||...-.+|. .-|.+|+|.=-|..=+- +|+++ . .+...+ .|-+=++| |++||.+..|-.+
T Consensus 174 v~g~~~~~~~l~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~-~----~~~lEl-GGk~~~iV--~~dAdl~~aa~~i 241 (443)
T cd07152 174 LPGGADAGEALV----EDPNVAMISFTGSTAVGRKVGEAAGRHL-K----KVSLEL-GGKNALIV--LDDADLDLAASNG 241 (443)
T ss_pred ecCChHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcC-C----cEEEEC-CCCCeEEE--CCCCCHHHHHHHH
Confidence 5554333342 34789998555544332 22211 1 133333 25554444 5679999888876
Q ss_pred H-hhhccC---CCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 303 L-SQAEHG---PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 303 L-aQAEHd---p~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+ +---+. -.+. -++| .++.. ++..+.+.++++.+
T Consensus 242 ~~~~~~~~GQ~C~a~~rv~V--~~~i~-~~f~~~l~~~~~~~ 280 (443)
T cd07152 242 AWGAFLHQGQICMAAGRHLV--HESVA-DAYTAKLAAKAKHL 280 (443)
T ss_pred HHHHHhhcCCCCcCCeeEEE--cHHHH-HHHHHHHHHHHHhC
Confidence 5 222222 2222 3555 33455 77777777666655
No 67
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=57.27 E-value=2.2e+02 Score=34.27 Aligned_cols=166 Identities=23% Similarity=0.300 Sum_probs=89.4
Q ss_pred EEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCcc-hhhc--c-hHHH
Q 016315 161 RVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTH-ILKA--G-GAQA 235 (391)
Q Consensus 161 qr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~e-Iy~v--G-GAQA 235 (391)
..+.|+.-|+|..|.- ||-.. +-.++||-+||. -|++-|+...-.+.-.+....+.+|+.+ ++.+ | |...
T Consensus 672 ~~~~P~GVv~~IsPwN---fPlai~~g~i~aALaaGN--~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~v 746 (1208)
T PRK11905 672 PGHKPLGPVVCISPWN---FPLAIFTGQIAAALVAGN--TVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTV 746 (1208)
T ss_pred ceecCccEEEEEcCCc---CHHHHHHHHHHHHHHcCC--EEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHH
Confidence 3567999999999963 66544 446679999998 4555565321111112233445667742 3322 3 4333
Q ss_pred HHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCC-CCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccC---
Q 016315 236 ISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNS-EAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG--- 309 (391)
Q Consensus 236 IAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~-~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHd--- 309 (391)
-.+|. .-|+||.|+=-|..=|... +.+.... ...--|==.-|-+ .+|-|++||++.++.|++.=|=+.
T Consensus 747 g~~Lv----~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN--~~IV~~dAdle~Av~~iv~saF~~aGQ 820 (1208)
T PRK11905 747 GAALV----ADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQN--AMIVDSSALPEQVVADVIASAFDSAGQ 820 (1208)
T ss_pred HHHHH----cCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcC--eEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 33333 3488999877777655433 1111100 0000011112333 345588999999999987433221
Q ss_pred -CCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 310 -PDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 310 -p~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-.|...|+. .++++ +++.+.+...++++
T Consensus 821 ~CsA~~rl~V-~~si~-d~f~e~L~~~~~~l 849 (1208)
T PRK11905 821 RCSALRVLCL-QEDVA-DRVLTMLKGAMDEL 849 (1208)
T ss_pred ccccCcEEEE-ehhHH-HHHHHHHHHHHHHh
Confidence 123233333 34566 77777777776665
No 68
>PLN02467 betaine aldehyde dehydrogenase
Probab=56.60 E-value=2.8e+02 Score=29.66 Aligned_cols=164 Identities=21% Similarity=0.258 Sum_probs=89.3
Q ss_pred EEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCc-chhh-c-c-h
Q 016315 159 CKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILK-A-G-G 232 (391)
Q Consensus 159 ~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~-iLaAA~laGv~-eIy~-v-G-G 232 (391)
.-.++.|+.-|++..|.- || ...+...+||-.||+.=|+ -|+... ..... +..+.+.+|.. .++. + | |
T Consensus 145 ~~~~~~P~GVv~~I~PwN---~P~~~~~~~i~~ALaaGN~Vv~--Kps~~t-p~~~~~l~~~~~eag~P~gvv~~v~g~~ 218 (503)
T PLN02467 145 GYVLKEPLGVVGLITPWN---YPLLMATWKVAPALAAGCTAVL--KPSELA-SVTCLELADICREVGLPPGVLNVVTGLG 218 (503)
T ss_pred eEEEEecCceEEEECCCC---hHHHHHHHHHHHHHHcCCEEEE--ECCCcC-cHHHHHHHHHHHHcCcCcCeEEEEeCCc
Confidence 446789999999999985 77 4455677899999997444 343221 12222 33345666654 2222 2 3 4
Q ss_pred HHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhh----h
Q 016315 233 AQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ----A 306 (391)
Q Consensus 233 AQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQ----A 306 (391)
.....+|. .-|.||+|+=-|..=+-.+ +..... .-.+... +.|-+=++| |++||.+..+-.++.- +
T Consensus 219 ~~~~~~L~----~~~~v~~v~fTGs~~~g~~v~~~aa~~-~~~~~lE-lGG~~~~iV--~~dADl~~A~~~i~~~~f~~~ 290 (503)
T PLN02467 219 TEAGAPLA----SHPGVDKIAFTGSTATGRKIMTAAAQM-VKPVSLE-LGGKSPIIV--FDDVDLDKAVEWAMFGCFWTN 290 (503)
T ss_pred hhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhcc-CCcEEEE-CCCCCceEE--CCCCCHHHHHHHHHHHHHhhc
Confidence 44444453 3578998876666554322 111100 0002122 335554444 4568998877665422 2
Q ss_pred ccCCCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EHGPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EHdp~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=+.-.|. -++| .+++. +++.+.+.+.++.+
T Consensus 291 GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~l 321 (503)
T PLN02467 291 GQICSATSRLLV--HERIA-SEFLEKLVKWAKNI 321 (503)
T ss_pred CCCCCCCcEEEE--cHHHH-HHHHHHHHHHHHhc
Confidence 2222222 3455 44465 77777777666654
No 69
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=55.68 E-value=2.6e+02 Score=29.02 Aligned_cols=165 Identities=22% Similarity=0.211 Sum_probs=91.7
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v-- 230 (391)
.|.....++.|+.-|+++.|.- ||... +...+||-.||+.=|+--+|-.+ ...-.+......+|.. .++.+
T Consensus 107 ~~~~~~~~~~P~Gvv~~i~p~N---~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p--~~~~~l~~~~~~aGlP~~~~~~v~ 181 (453)
T cd07115 107 GPFLNYTVREPVGVVGAIVPWN---FPLMFAAWKVAPALAAGNTVVLKPAELTP--LSALRIAELMAEAGFPAGVLNVVT 181 (453)
T ss_pred CCceEEEEecceeEEEEEcCCC---CHHHHHHHHHHHHHhcCCEEEEECCCCCc--HHHHHHHHHHHhcCcCchheEEEe
Confidence 4555667889999999999965 77544 45678999999975444333211 1111233334556653 33332
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHH------HHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHH
Q 016315 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTA------AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 231 G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~------AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLL 303 (391)
| |...-.+|. +-|.+|.|+==|..=+-. |+.+ . .|-..+ -|-+ -+|-+++||.+.+|.+++
T Consensus 182 g~~~~~~~~l~----~~~~id~v~fTGs~~~g~~v~~~aa~~~--~---~~~lEl-gG~~--p~iV~~dAdl~~aa~~i~ 249 (453)
T cd07115 182 GFGEVAGAALV----EHPDVDKITFTGSTAVGRKIMQGAAGNL--K---RVSLEL-GGKS--ANIVFADADLDAAVRAAA 249 (453)
T ss_pred cCchhHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcC--C---eEEEec-CCCC--ceEECCCCCHHHHHHHHH
Confidence 3 222223332 357899988777754422 2211 0 011111 1322 234456799999888886
Q ss_pred hhhccC----CCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 304 SQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 304 aQAEHd----p~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.-+=.. -.+. -++| .++++ ++..+++.+.++.+
T Consensus 250 ~~~~~~~GQ~C~a~~~v~V--~~~i~-~~f~~~l~~~~~~~ 287 (453)
T cd07115 250 TGIFYNQGQMCTAGSRLLV--HESIY-DEFLERFTSLARSL 287 (453)
T ss_pred HHHHhccCCCCCCCeEEEE--cHHHH-HHHHHHHHHHHhcC
Confidence 553322 2222 2444 45566 77888787777665
No 70
>PRK13411 molecular chaperone DnaK; Provisional
Probab=54.03 E-value=27 Score=38.34 Aligned_cols=48 Identities=17% Similarity=0.228 Sum_probs=35.1
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|.++|++.|+.-+..---+++.||.++|.+.+.-+=-.-| ||++||..
T Consensus 133 v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtA-AAl~y~~~ 180 (653)
T PRK13411 133 VTQAVITVPAYFTDAQRQATKDAGTIAGLEVLRIINEPTA-AALAYGLD 180 (653)
T ss_pred cceEEEEECCCCCcHHHHHHHHHHHHcCCCeEEEecchHH-HHHHhccc
Confidence 5677777777543333447899999999988777766655 57899975
No 71
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=52.24 E-value=3.2e+02 Score=29.08 Aligned_cols=170 Identities=17% Similarity=0.200 Sum_probs=93.1
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v-- 230 (391)
|...-.++.|+.-|+++.|. -||-.. +...+||-.||+.=|+- |.... .... .+..+...+|+. .++.+
T Consensus 157 ~~~~~~~~~P~GVv~~I~pw---N~P~~~~~~~i~~ALaaGN~VVlK--Ps~~t-p~~~~~l~~~~~~aGlP~gvv~vv~ 230 (512)
T cd07124 157 GEDNRYVYRPLGVGAVISPW---NFPLAILAGMTTAALVTGNTVVLK--PAEDT-PVIAAKLVEILEEAGLPPGVVNFLP 230 (512)
T ss_pred CceeEEEEecceEEEEECCC---ChHHHHHHHHHHHHHHcCCEEEEE--CCccc-cHHHHHHHHHHHHhCcCCCceEEec
Confidence 43445678999999999995 477654 55788999999964443 43221 1222 233445566763 33332
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHH-HhcC-----CCCcccccCCCCCcEEEEEecCCCCHHHHHHHHH
Q 016315 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQN-----SEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 231 G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr-~v~~-----~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLL 303 (391)
| |...-.+|. .-|.+|+|.==|..-+-.+=. ..+. .+..--+=-+.|-+=+ |-|++||.+..|-.++
T Consensus 231 g~~~~~~~~L~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~--iV~~daDl~~Aa~~i~ 304 (512)
T cd07124 231 GPGEEVGDYLV----EHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAI--IVDEDADLDEAAEGIV 304 (512)
T ss_pred cCchHHHHHHh----cCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeE--EECCCCCHHHHHHHHH
Confidence 3 443334443 358899998777766532211 1110 0000011123455533 4456799998887776
Q ss_pred hhhccCC----CCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 304 SQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 304 aQAEHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.-+=+.. .|...|+. .++++ ++..+.+.+.++.+
T Consensus 305 ~~~f~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~~ 342 (512)
T cd07124 305 RSAFGFQGQKCSACSRVIV-HESVY-DEFLERLVERTKAL 342 (512)
T ss_pred HHHHhhCCCccccceEEEE-cHHHH-HHHHHHHHHHHHhC
Confidence 5443322 23333443 34455 77777777666644
No 72
>PRK13410 molecular chaperone DnaK; Provisional
Probab=52.00 E-value=24 Score=38.99 Aligned_cols=48 Identities=19% Similarity=0.220 Sum_probs=34.9
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|.++|++.|+.-+-.---+++.||+++|.+-+.-+=-..| ||++||..
T Consensus 135 v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtA-AAlayg~~ 182 (668)
T PRK13410 135 VTGAVITVPAYFNDSQRQATRDAGRIAGLEVERILNEPTA-AALAYGLD 182 (668)
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecchHH-HHHHhccc
Confidence 5678888887533222237899999999987777766666 67899975
No 73
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=51.86 E-value=3e+02 Score=28.71 Aligned_cols=164 Identities=18% Similarity=0.247 Sum_probs=92.9
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH--HHHHHHHHcCCc-chhhc
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK--EVLYCAKKAGVT-HILKA 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--~iLaAA~laGv~-eIy~v 230 (391)
+|.....++.|+.-|++..|.- || ++.+...+||-.||+.=|+--+|-. .... .+..++..+|+. .++.+
T Consensus 120 ~~~~~~~~~~P~Gvv~~I~p~N---~P~~~~~~~~~~ALaaGN~Vi~Kps~~~---p~~~~~~l~~~l~~aG~P~gvv~~ 193 (465)
T cd07151 120 PGKENRVYREPLGVVGVISPWN---FPLHLSMRSVAPALALGNAVVLKPASDT---PITGGLLLAKIFEEAGLPKGVLNV 193 (465)
T ss_pred CCceeEEEEecceEEEEECCCC---hHHHHHHHHHHHHHHcCCEEEEECCCCC---cHhHHHHHHHHHHHcCcCccceEE
Confidence 4555667899999999999963 66 4455678899999997555443321 1121 223356677774 34443
Q ss_pred --c-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHH
Q 016315 231 --G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 301 (391)
Q Consensus 231 --G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaD 301 (391)
| |...-.+|. +-|.+|+|.=-|..=|- +|+.+ .. +...+ -|-+=+ |-|++||.+..|..
T Consensus 194 v~g~~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~aa~~~-~~----~~lEl-GGk~p~--iV~~daDl~~Aa~~ 261 (465)
T cd07151 194 VVGAGSEIGDAFV----EHPVPRLISFTGSTPVGRHIGELAGRHL-KK----VALEL-GGNNPF--VVLEDADIDAAVNA 261 (465)
T ss_pred EecCchhhHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcC-Cc----EEEEC-CCCCeE--EECCCCCHHHHHHH
Confidence 3 443323333 23779998877777442 12211 11 33333 244433 33566899998888
Q ss_pred HHhhhc-cCC---CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 302 LLSQAE-HGP---DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 302 LLaQAE-Hdp---~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
++.-+= |.- .+ .-++| .+++. +++.+.+.+.++.+
T Consensus 262 i~~~~f~~~GQ~C~a~~rv~V--~~~i~-~~f~~~l~~~~~~~ 301 (465)
T cd07151 262 AVFGKFLHQGQICMAINRIIV--HEDVY-DEFVEKFVERVKAL 301 (465)
T ss_pred HHHHHHhcCCCCCcCCcEEEE--eHHHH-HHHHHHHHHHHHhC
Confidence 765542 221 12 23555 33455 66666666665554
No 74
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=51.18 E-value=3e+02 Score=28.54 Aligned_cols=167 Identities=19% Similarity=0.241 Sum_probs=88.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHhh-hhccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCcc-hhhc--
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTAL-MLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-ILKA-- 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTvL-M~aIPAkVAGV~~Ivv~TPP~~~G~i~p~-iLaAA~laGv~e-Iy~v-- 230 (391)
|...-.++.|+.-|++..|. -||-... ...+||-.+|+.=|+--+|- ...... +......+|..+ ++.+
T Consensus 108 ~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~ALaaGN~VvlKps~~---~p~~~~~l~~~~~~aGlP~gvv~~v~ 181 (448)
T TIGR01780 108 DKRLLVIKQPVGVCAAITPW---NFPAAMITRKAGAALAAGCTVVVKPAEQ---TPLSALALARLAEQAGIPKGVLNVIT 181 (448)
T ss_pred CceeEEEEeeeeEEEEEcCC---ChHHHHHHHHHHHHHHcCCeEeeECCcc---chHHHHHHHHHHHHcCCCccceEEEe
Confidence 33334557999999999996 4775544 57889999999744433322 112222 233456677642 3222
Q ss_pred c--hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh
Q 016315 231 G--GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 306 (391)
Q Consensus 231 G--GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA 306 (391)
| |...-.+|. .-|++|+|.==|..=|-.+ ++.-.. -..|... +.|-+=+ |-+++||.+.++..++.-+
T Consensus 182 g~~~~~~~~~l~----~~~~i~~v~ftGs~~~g~~v~~~aa~~-~~~~~lE-lGGk~~~--iV~~dadl~~aa~~iv~~~ 253 (448)
T TIGR01780 182 GSRAKEVGKVLC----TSPLVRKISFTGSTNVGKILMKQSAST-VKKVSME-LGGNAPF--IVFDDADIDQAVEGAMASK 253 (448)
T ss_pred CCCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhc-CCceEee-cCCCCee--EECCCCCHHHHHHHHHHHH
Confidence 3 343333332 2478998865555544211 221100 0013333 3355533 3456789999887766433
Q ss_pred ccC----CCC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EHG----PDS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EHd----p~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
=.. -.| +-++| .++.. +++.+.+.+.++.+
T Consensus 254 f~~sGQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~l 288 (448)
T TIGR01780 254 FRNAGQTCVCANRLYV--HDGIY-DEFAKKLAEAVKKL 288 (448)
T ss_pred HHhcCCcccCCceeec--hHHHH-HHHHHHHHHHHHhc
Confidence 221 122 23455 44455 66666666666555
No 75
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=50.38 E-value=2.9e+02 Score=28.16 Aligned_cols=168 Identities=18% Similarity=0.206 Sum_probs=89.6
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCH--HHHHHHHHcCCc-c---h
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK--EVLYCAKKAGVT-H---I 227 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p--~iLaAA~laGv~-e---I 227 (391)
+|...-.++.|+.-|++..|. -||- +.+...+||-.+|+.=|+-.+|- . .... .+..+.+.+|.. . +
T Consensus 88 ~g~~~~~~~~P~GVv~~i~p~---N~P~~~~~~~~~~ALaaGN~Vi~Kps~~--~-p~~~~~~l~~~l~~aGlP~gvv~~ 161 (431)
T cd07104 88 PGKESMVRRVPLGVVGVISPF---NFPLILAMRSVAPALALGNAVVLKPDSR--T-PVTGGLLIAEIFEEAGLPKGVLNV 161 (431)
T ss_pred CCceeEEEEeeeeeEEEECCC---CcHHHHHHHHHHHHHHcCCeEEeeCCCC--C-hHHHHHHHHHHHHHcCCCcccEEE
Confidence 455556788999999999995 3553 34567789999999755433221 0 0111 133344556654 2 2
Q ss_pred hhcchHHHHHHHhhCCCCCCCceEEecCCcHHHH--HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh-
Q 016315 228 LKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS- 304 (391)
Q Consensus 228 y~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt--~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa- 304 (391)
..-+|...-.+|. .-|++|+|+=-|+.=+- .+|+.-.. ...+...+ .|-+ -+|-|++||.+..|.+++.
T Consensus 162 v~g~~~~~~~~L~----~~~~i~~V~ftGs~~~g~~v~~~aa~~-~~~~~lel-gG~~--~~iV~~dadl~~aa~~i~~~ 233 (431)
T cd07104 162 VPGGGSEIGDALV----EHPRVRMISFTGSTAVGRHIGELAGRH-LKKVALEL-GGNN--PLIVLDDADLDLAVSAAAFG 233 (431)
T ss_pred eeCCchhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhc-CCcEEEEc-CCCC--eEEECCCCCHHHHHHHHHHH
Confidence 2223333323333 35789998655554432 12221100 00133332 1443 5666778999998888863
Q ss_pred hhccCC---CCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 QAEHGP---DSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 QAEHdp---~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
--.|.- .+. -++| .++.. ++..+.+.++++.+
T Consensus 234 ~~~~~GQ~C~a~~~v~v--~~~i~-~~f~~~l~~~~~~~ 269 (431)
T cd07104 234 AFLHQGQICMAAGRILV--HESVY-DEFVEKLVAKAKAL 269 (431)
T ss_pred HHhcCCCCcccCcEEEE--cHHHH-HHHHHHHHHHHHhc
Confidence 223322 222 3444 33455 66666666666554
No 76
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=50.17 E-value=3.3e+02 Score=28.59 Aligned_cols=239 Identities=15% Similarity=0.146 Sum_probs=119.0
Q ss_pred ChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 016315 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (391)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~ 151 (391)
..++-.+..+.+.+.++++.|+=..-.++...+- +.-...|+ . ...+.++..+++++++.... ....
T Consensus 43 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~~a~~ev-----~-~~~~~~~~~~~~~~~~~~~~---~~~~ 109 (457)
T PRK09406 43 TFAQRARWANAAADLLEAEADQVAALMTLEMGKT----LASAKAEA-----L-KCAKGFRYYAEHAEALLADE---PADA 109 (457)
T ss_pred CHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCC----HHHHHHHH-----H-HHHHHHHHHHHHHHHHhCCc---cccc
Confidence 3445556667777777777665433333333211 00000011 1 23444555555554442111 1110
Q ss_pred EecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCC-cchh
Q 016315 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGV-THIL 228 (391)
Q Consensus 152 ~~~~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv-~eIy 228 (391)
....+...-.++.|+.-|++..|.- || ...++..+||-.||+.=|+ -|+. .-.... .+..+...+|. +.++
T Consensus 110 ~~~~~~~~~~~~~P~GvV~~I~PwN---~Pl~~~~~~~~~ALaaGN~VV~--Kps~-~~p~~~~~l~~l~~~aGlP~gvv 183 (457)
T PRK09406 110 AAVGASRAYVRYQPLGVVLAVMPWN---FPLWQVVRFAAPALMAGNVGLL--KHAS-NVPQTALYLADLFRRAGFPDGCF 183 (457)
T ss_pred cCCCCceEEEEEecceeEEEECCcc---chHHHHHHHHHHHHHcCCEEEE--ECCC-cCcHHHHHHHHHHHHhCCCcCcE
Confidence 0112233445789999999999953 55 4556678899999997443 3542 211111 23334456776 4565
Q ss_pred hc--chHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHH-HhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhh
Q 016315 229 KA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 305 (391)
Q Consensus 229 ~v--GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr-~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQ 305 (391)
.+ ||.....+|. +=|++|+|.=-|..=+-.+=. ..+..--.+-.. +.|-+=+ |-+++||.+..|-.++.-
T Consensus 184 ~~v~~g~~~~~~l~----~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lE-lGG~~~~--iV~~dadl~~aa~~i~~~ 256 (457)
T PRK09406 184 QTLLVGSGAVEAIL----RDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLE-LGGSDPF--IVMPSADLDRAAETAVTA 256 (457)
T ss_pred EEEcCCchhHHHHh----cCCCcCEEEEECcHHHHHHHHHHHHhcCCceeee-cCCCCee--EECCCCCHHHHHHHHHHH
Confidence 53 5654555553 348899887666654332211 111100002122 3355544 445568999888776533
Q ss_pred hccCCC----Cc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 306 AEHGPD----SQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 306 AEHdp~----a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+=+... +. -++| .++.+ ++..+.+.+.++.+
T Consensus 257 ~~~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~l 292 (457)
T PRK09406 257 RVQNNGQSCIAAKRFIV--HADVY-DAFAEKFVARMAAL 292 (457)
T ss_pred HhhCCCCcccCCeEEEE--cHHHH-HHHHHHHHHHHhhC
Confidence 322221 22 3444 23344 66666666666555
No 77
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=50.09 E-value=37 Score=33.82 Aligned_cols=72 Identities=18% Similarity=0.273 Sum_probs=49.1
Q ss_pred CeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccc
Q 016315 197 KTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISI 276 (391)
Q Consensus 197 ~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgI 276 (391)
+++|+|.||.-+..---.+..|+..+|++.++-+=-+ --||++||+.. + +| .+ .+-+
T Consensus 99 ~~vvitvP~~~~~~~R~~l~~a~~~ag~~~~~li~ep-~Aaa~~~g~~~----~---~~-----------~~----~lvv 155 (335)
T PRK13929 99 PNVVVCTPSGSTAVERRAISDAVKNCGAKNVHLIEEP-VAAAIGADLPV----D---EP-----------VA----NVVV 155 (335)
T ss_pred CeEEEEcCCCCCHHHHHHHHHHHHHcCCCeeEeecCH-HHHHHhcCCCc----C---CC-----------ce----EEEE
Confidence 3678888885332223368889999999999988666 34677888641 1 01 11 2567
Q ss_pred cCCCCCcEEEEEecC
Q 016315 277 DMPAGPSEVLVIADI 291 (391)
Q Consensus 277 D~~AGPSEvlVIAD~ 291 (391)
|+=+|-+++.++.++
T Consensus 156 DiG~gtt~v~vi~~~ 170 (335)
T PRK13929 156 DIGGGTTEVAIISFG 170 (335)
T ss_pred EeCCCeEEEEEEEeC
Confidence 999999999999654
No 78
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]
Probab=49.69 E-value=15 Score=37.92 Aligned_cols=83 Identities=23% Similarity=0.264 Sum_probs=51.4
Q ss_pred eEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcch--HHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 016315 198 TVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGG--AQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 275 (391)
Q Consensus 198 ~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGG--AQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~Vg 275 (391)
+|++|+|-.....=--++..||.-+|+++||.+== |-||+|..+=.| ..|.+-
T Consensus 103 rI~i~vP~g~T~VErrAi~ea~~~aGa~~V~lieEp~aAAIGaglpi~e-------------------------p~G~mv 157 (342)
T COG1077 103 RIVICVPSGITDVERRAIKEAAESAGAREVYLIEEPMAAAIGAGLPIME-------------------------PTGSMV 157 (342)
T ss_pred cEEEEecCCccHHHHHHHHHHHHhccCceEEEeccHHHHHhcCCCcccC-------------------------CCCCEE
Confidence 56666665422222347899999999999998743 344555443221 112367
Q ss_pred ccCCCCCcEEEEEecC---CCCHHHHHHHHHhh
Q 016315 276 IDMPAGPSEVLVIADI---YASPVHIAADLLSQ 305 (391)
Q Consensus 276 ID~~AGPSEvlVIAD~---tAnP~~VAaDLLaQ 305 (391)
+|-=.|-|||.||++. +.+-..++-|.|-|
T Consensus 158 vDIGgGTTevaVISlggiv~~~Sirv~GD~~De 190 (342)
T COG1077 158 VDIGGGTTEVAVISLGGIVSSSSVRVGGDKMDE 190 (342)
T ss_pred EEeCCCceeEEEEEecCEEEEeeEEEecchhhH
Confidence 8888899999999986 23444445554443
No 79
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=49.55 E-value=4.1e+02 Score=29.54 Aligned_cols=135 Identities=15% Similarity=0.127 Sum_probs=73.6
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHhh-hhccceeecCCCeEEEEcCCCCCCCCCHHHH-HHHHHcCCc-chhh--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTAL-MLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILK--A 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTvL-M~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iL-aAA~laGv~-eIy~--v 230 (391)
|...-.++.|+.-|++..|.- ||-... ...+||-.||+.=| +-|+.. .......| .++..+|.. .++. .
T Consensus 240 ~~~~~~~reP~GVV~~I~PwN---fPl~l~~~~iapALaAGNtVV--lKPSe~-tp~ta~~l~~l~~eAGlP~GvvnvV~ 313 (604)
T PLN02419 240 GVDTYSIREPLGVCAGICPFN---FPAMIPLWMFPVAVTCGNTFI--LKPSEK-DPGASVILAELAMEAGLPDGVLNIVH 313 (604)
T ss_pred CccceEEecCccEEEEECCCc---cHHHHHHHHHHHHHHcCCEEE--EeCCCC-CcHHHHHHHHHHHHhCcCcceEEEEe
Confidence 333446789999999999974 554444 45779999998644 445421 11222222 344566652 2222 2
Q ss_pred chHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHH-HhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHH
Q 016315 231 GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 231 GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr-~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLL 303 (391)
|+.....+|. +=|+||+|.=-|..-|-..-. ..+...-.|... +-|-+ -+|| +++||.+..|..++
T Consensus 314 G~~~~~~~L~----~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LE-LGGkn-p~IV-~~DADld~Aa~~iv 380 (604)
T PLN02419 314 GTNDTVNAIC----DDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSN-MGAKN-HGLV-LPDANIDATLNALL 380 (604)
T ss_pred CChHHHHHHH----hCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEe-cCCCC-eEEE-cCCCCHHHHHHHHH
Confidence 4344444443 248999999888876533211 111100012222 23444 3444 45699998777665
No 80
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=48.98 E-value=31 Score=38.11 Aligned_cols=48 Identities=23% Similarity=0.296 Sum_probs=36.6
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|+++|++.|+.-+..---+++.||.++|.+.+.-+=-.-| ||++||..
T Consensus 174 v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptA-AAlay~~~ 221 (663)
T PTZ00400 174 VKQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTA-AALAFGMD 221 (663)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCchHH-HHHHhccc
Confidence 6788888888543222347999999999998887777765 67899975
No 81
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=48.46 E-value=3.7e+02 Score=28.73 Aligned_cols=182 Identities=21% Similarity=0.213 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCC
Q 016315 130 FDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQD 208 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~ 208 (391)
+..++++++.|-... . .+. | ..++.|+.-|+++.|. -||-.. +...+||-.||..=| +-|+...
T Consensus 135 v~~~i~~l~~~a~~~-~-~~~-----~---~~~~~P~GVV~~I~pw---N~P~~~~~~~i~~ALaaGN~VV--lKps~~t 199 (500)
T TIGR01238 135 VREAVDFCRYYAKQV-R-DVL-----G---EFSVESRGVFVCISPW---NFPLAIFTGQISAALAAGNTVI--AKPAEQT 199 (500)
T ss_pred HHHHHHHHHHHHHHH-H-Hhc-----C---ceeccCcceEEEECCC---chHHHHHHHHHHHHHHcCCEEE--EeCCCCc
Confidence 566677776665432 1 111 1 1258899999999995 466544 557789999999733 3344211
Q ss_pred CCCCHH-HHHHHHHcCCc-chhhc--c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHH------HHHHhcCCCCccccc
Q 016315 209 GSICKE-VLYCAKKAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTA------AKMILQNSEAMISID 277 (391)
Q Consensus 209 G~i~p~-iLaAA~laGv~-eIy~v--G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~------AKr~v~~~~g~VgID 277 (391)
..... +..+...+|.. .++.+ | |...-.+|. +-|++|+|+==|..=+-. |++.-... .|-.
T Consensus 200 -p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~--~v~l- 271 (500)
T TIGR01238 200 -SLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALT----SDPRIAGVAFTGSTEVAQLINQTLAQREDAPV--PLIA- 271 (500)
T ss_pred -cHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHh----cCCCcCeEEEECCHHHHHHHHHHHhhcccCCc--eEEE-
Confidence 11112 22234556653 33322 3 323223333 358899998777654432 22210000 0111
Q ss_pred CCCCCcEEEEEecCCCCHHHHHHHHHhh----hccCCCC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 278 MPAGPSEVLVIADIYASPVHIAADLLSQ----AEHGPDS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 278 ~~AGPSEvlVIAD~tAnP~~VAaDLLaQ----AEHdp~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-+-|=+= +|-|++||.+.+|-.++.= +=+--.| ..++| .+++. +++.+.+.+.++.+
T Consensus 272 ElGGknp--~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V--~~~i~-d~f~~~L~~~~~~~ 333 (500)
T TIGR01238 272 ETGGQNA--MIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCV--QEDVA-DRVLTMIQGAMQEL 333 (500)
T ss_pred ecCCcCc--EEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEE--cHhhH-HHHHHHHHHHHHhC
Confidence 1123332 3446779998876665431 1111222 23555 34455 66666666665553
No 82
>PLN03184 chloroplast Hsp70; Provisional
Probab=48.31 E-value=30 Score=38.29 Aligned_cols=48 Identities=19% Similarity=0.251 Sum_probs=37.6
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|+++|++.|+.-+-.---+++.||.++|.+.+.-+=-..| ||++||..
T Consensus 172 v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtA-AAlayg~~ 219 (673)
T PLN03184 172 VTKAVITVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTA-ASLAYGFE 219 (673)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHCCCCeEEEeCcHHH-HHHHhhcc
Confidence 7889999998533222347999999999998888888877 67999975
No 83
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=46.49 E-value=1.3e+02 Score=32.01 Aligned_cols=199 Identities=14% Similarity=0.133 Sum_probs=109.6
Q ss_pred ChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 016315 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 150 (391)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~~-~~~ 150 (391)
+..+-.+..+.+-+.++++.|+=....++.+-+.. . +..+ ..+. ...+.|+.++++++++.+..... .+.
T Consensus 27 ~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~-~-----ea~~--~Ev~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 97 (493)
T PTZ00381 27 PLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHP-F-----ETKM--TEVL-LTVAEIEHLLKHLDEYLKPEKVDTVGV 97 (493)
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-H-----HHHH--HHHH-HHHHHHHHHHHHHHHHhCCcccCCccc
Confidence 44455666777788888888887777777764321 0 0000 0121 34556888888998887544222 221
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHH---HHHH-HH---c
Q 016315 151 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LYCA-KK---A 222 (391)
Q Consensus 151 ~~~~~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~i---LaAA-~l---a 222 (391)
. .++ ..-.++.|+.-|++..|. -|| ...+.-.+||-.||+.=|+= |.. ..|.+ |.-. +. .
T Consensus 98 ~--~~~-~~~v~~~PlGVV~iI~Pw---N~Pl~l~~~~l~~ALaaGN~VIlK--Pse----~tp~t~~~l~~ll~~~lp~ 165 (493)
T PTZ00381 98 F--GPG-KSYIIPEPLGVVLVIGAW---NYPLNLTLIPLAGAIAAGNTVVLK--PSE----LSPHTSKLMAKLLTKYLDP 165 (493)
T ss_pred c--CCC-ceEEEEecCcEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--CCc----cCHHHHHHHHHHHHHhCCc
Confidence 1 122 233578899999999996 477 56677889999999974443 432 22332 1111 11 1
Q ss_pred CCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHH
Q 016315 223 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 296 (391)
Q Consensus 223 Gv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~ 296 (391)
|+=.+. .||+....+|. + .++|+|+=-|+.=| ++|+.+.- | +=-+.|-| -+|-|++||.+
T Consensus 166 ~~v~vv-~g~~~~~~~l~---~--~~~d~i~FTGS~~vG~~V~~~aa~~l~p-----v-~lElGGk~--p~iV~~dAdl~ 231 (493)
T PTZ00381 166 SYVRVI-EGGVEVTTELL---K--EPFDHIFFTGSPRVGKLVMQAAAENLTP-----C-TLELGGKS--PVIVDKSCNLK 231 (493)
T ss_pred CEEEEe-cCCHHHHHHHH---h--CCCCEEEEECCHHHHHHHHHHHHhcCCc-----E-EEEcCCCC--ceEEcCCCCHH
Confidence 222222 25665545554 1 24898876666432 33333210 0 00122333 23445678998
Q ss_pred HHHHHHHhh
Q 016315 297 HIAADLLSQ 305 (391)
Q Consensus 297 ~VAaDLLaQ 305 (391)
..|-.++.-
T Consensus 232 ~Aa~~i~~g 240 (493)
T PTZ00381 232 VAARRIAWG 240 (493)
T ss_pred HHHHHHHHH
Confidence 888877644
No 84
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=46.47 E-value=4e+02 Score=28.57 Aligned_cols=232 Identities=16% Similarity=0.205 Sum_probs=123.6
Q ss_pred ChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 016315 72 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 151 (391)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~ 151 (391)
...+-.+..+.+-+.++++-|+=..-.++.+-+-..+.. ..| + ....+-++.++++++++...+.... ..
T Consensus 30 ~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~---~~E-----v-~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 99 (484)
T PLN02174 30 GYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESS---VYE-----V-SLLRNSIKLALKQLKNWMAPEKAKT-SL 99 (484)
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH---HHH-----H-HHHHHHHHHHHHHHHHHhccccccc-cc
Confidence 344556667777788888888776666666643110000 001 1 1345667888888888765433221 01
Q ss_pred EecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCHH---HHHHHHHc----C
Q 016315 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE---VLYCAKKA----G 223 (391)
Q Consensus 152 ~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~---iLaAA~la----G 223 (391)
. ..+...-.++.|+.-|++..|.- ||-. .+.-.+||-.||+.=|+= |+. ..|. +|+-+-.. |
T Consensus 100 ~-~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VVlK--Pse----~tp~~~~~l~~l~~~~lp~g 169 (484)
T PLN02174 100 T-TFPASAEIVSEPLGVVLVISAWN---YPFLLSIDPVIGAISAGNAVVLK--PSE----LAPASSALLAKLLEQYLDSS 169 (484)
T ss_pred c-cCCcceEEEEecceEEEEECCCc---cHHHHHHHHHHHHHHcCCEEEEE--CCC----CCHHHHHHHHHHHHHhCCCC
Confidence 1 11223346789999999999964 6654 455688999999965443 432 2332 22211111 2
Q ss_pred CcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHH
Q 016315 224 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 297 (391)
Q Consensus 224 v~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~ 297 (391)
+=.+. .||....+++. . |+||+|.=-|..-| ++|+.+- . |.. =+-|=|=++|. ++||.+.
T Consensus 170 vv~vv-~G~~~~~~~l~----~-~~vd~V~FTGS~~~G~~I~~~aa~~l~-~----v~L-ELGGk~p~iV~--~dADl~~ 235 (484)
T PLN02174 170 AVRVV-EGAVTETTALL----E-QKWDKIFYTGSSKIGRVIMAAAAKHLT-P----VVL-ELGGKSPVVVD--SDTDLKV 235 (484)
T ss_pred EEEEE-ECChHHHHHHh----c-ccCCEEEEECChHHHHHHHHHHHhcCC-c----EEE-ecCCCCeEEEc--CCCCHHH
Confidence 22222 25665666665 3 89999987777665 2333320 0 111 12344434443 4589888
Q ss_pred HHHHHHhhh-c-c-CC--CCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 298 IAADLLSQA-E-H-GP--DSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 298 VAaDLLaQA-E-H-dp--~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.|..++.-+ . + |- .|...++. .+++. +++.+.+.+.++.+
T Consensus 236 Aa~~i~~g~f~~n~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~ 280 (484)
T PLN02174 236 TVRRIIAGKWGCNNGQACISPDYILT-TKEYA-PKVIDAMKKELETF 280 (484)
T ss_pred HHHHHHHHHhhCCCCCCCCcCcEEEE-eHHHH-HHHHHHHHHHHHhh
Confidence 666655333 2 2 11 12223333 33455 66666665555443
No 85
>CHL00094 dnaK heat shock protein 70
Probab=45.84 E-value=18 Score=39.32 Aligned_cols=48 Identities=19% Similarity=0.263 Sum_probs=34.6
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|+++|++.|+.-+-.---++..||+++|.+.+.-+=-..| ||++||..
T Consensus 135 v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptA-AAlay~~~ 182 (621)
T CHL00094 135 VTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTA-ASLAYGLD 182 (621)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHH-HHHHhccc
Confidence 5677777777532112236889999999988777777777 77899975
No 86
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=45.32 E-value=19 Score=38.01 Aligned_cols=51 Identities=22% Similarity=0.266 Sum_probs=33.6
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCP 247 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIp 247 (391)
|.++|+.-|+.-+-.---+++.||.++|.+.+--+--..| ||++||...-.
T Consensus 135 ~~~~vitVPa~~~~~qr~~~~~Aa~~agl~~~~li~Ep~A-aa~~y~~~~~~ 185 (602)
T PF00012_consen 135 VTDVVITVPAYFTDEQRQALRDAAELAGLNVLRLINEPTA-AALAYGLERSD 185 (602)
T ss_dssp EEEEEEEE-TT--HHHHHHHHHHHHHTT-EEEEEEEHHHH-HHHHTTTTSSS
T ss_pred cccceeeechhhhhhhhhcccccccccccccceeeccccc-ccccccccccc
Confidence 3466777777432222347999999999988777776666 57899977655
No 87
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=44.77 E-value=36 Score=37.02 Aligned_cols=48 Identities=19% Similarity=0.264 Sum_probs=34.6
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|.++|++.|+.-+..---+++.||.++|.+.+.-+=-..| ||++||..
T Consensus 133 v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptA-AAl~y~~~ 180 (627)
T PRK00290 133 VTEAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTA-AALAYGLD 180 (627)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecchHH-HHHHhhhc
Confidence 5677777787533222347899999999987777776666 57899975
No 88
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=43.07 E-value=11 Score=31.28 Aligned_cols=44 Identities=18% Similarity=0.313 Sum_probs=23.5
Q ss_pred ccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCCCceEEEecCchHHHHHHHHHHH
Q 016315 274 ISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEIS 333 (391)
Q Consensus 274 VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~ 333 (391)
.-||||.|-+++. .-.. ++-|.+.+++|||-.++++..|++.++
T Consensus 4 LiiD~PPGTgD~~----------l~~~------~~~~~~g~ivVTTPq~la~~dv~r~~~ 47 (81)
T PF10609_consen 4 LIIDLPPGTGDEH----------LTLM------QYLPIDGAIVVTTPQELALADVRRAID 47 (81)
T ss_dssp EEEE--SCSSSHH----------HHHH------HHH--SEEEEEE-CCC--HHHHHHHHH
T ss_pred EEEeCCCCCCcHH----------HHHH------HhCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 4589999977532 2222 233478899999999999555555544
No 89
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=42.63 E-value=4.2e+02 Score=27.71 Aligned_cols=165 Identities=21% Similarity=0.187 Sum_probs=89.1
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA-- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v-- 230 (391)
.|.....++.|+.-|++..|.- ||- +.+...+||-.||+.=| +-|+...-...-.+......+|.. .++.+
T Consensus 131 ~~~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~~~~AL~aGN~Vv--lKps~~~p~~~~~l~~~~~~aglP~g~~~~v~ 205 (476)
T cd07091 131 GNFLAYTRREPIGVCGQIIPWN---FPLLMLAWKLAPALAAGNTVV--LKPAEQTPLSALYLAELIKEAGFPPGVVNIVP 205 (476)
T ss_pred CCceEEEEEeceeEEEEECCCc---CHHHHHHHHHHHHHHcCCEEE--EeCCCCChHHHHHHHHHHHHcCcCCCcEEEEe
Confidence 3444456889999999999975 453 44567889999998644 334421100111233334455553 23322
Q ss_pred c-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHH-HHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHH
Q 016315 231 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 302 (391)
Q Consensus 231 G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AK-r~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDL 302 (391)
| |.+.-.+|. +-|+||+|+=-|..-+- +|+ .+ . .+-..+ .|-+ -+|-|++||-+..|-.+
T Consensus 206 g~~~~~~~~L~----~~~~vd~V~fTGs~~~g~~v~~~aa~~~~--~---~~~lEl-gG~~--~~iV~~dADl~~Aa~~i 273 (476)
T cd07091 206 GFGPTAGAAIS----SHMDVDKIAFTGSTAVGRTIMEAAAKSNL--K---KVTLEL-GGKS--PNIVFDDADLDKAVEWA 273 (476)
T ss_pred CCChhHHHHHh----cCCCcCEEEEECcHHHHHHHHHHHHhcCC--c---eEEEec-CCCC--eEEECCCCCHHHHHHHH
Confidence 2 444333443 35889999877765431 222 10 0 011111 1333 34446679999888777
Q ss_pred HhhhccCC----CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 303 LSQAEHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 303 LaQAEHdp----~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
+.-+=... .| ..++| .++.. ++..+.+.++++.+
T Consensus 274 ~~~~~~~~GQ~C~a~~rv~V--~~~v~-~~f~~~L~~~~~~~ 312 (476)
T cd07091 274 AFGIFFNQGQCCCAGSRIFV--QESIY-DEFVEKFKARAEKR 312 (476)
T ss_pred HHHHHhccCCCCcCCcEEEE--eHHHH-HHHHHHHHHHHhhC
Confidence 65554332 12 23555 33455 66666666665554
No 90
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=42.52 E-value=6.7e+02 Score=30.72 Aligned_cols=185 Identities=22% Similarity=0.233 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhh-hhccceeecCCCeEEEEcCCCCC
Q 016315 130 FDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTAL-MLSVPAQIAGCKTVVLATPPSQD 208 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvL-M~aIPAkVAGV~~Ivv~TPP~~~ 208 (391)
++.|++.++-|.. |....+. ..+++|+.-|+|..|.- ||-... ....||-+||.. |++=|....
T Consensus 743 V~eaidflryyA~-~a~~~~~---------~~~~~PlGVV~~IsPWN---FPlai~~g~iaaALaAGN~--VV~KPseqT 807 (1318)
T PRK11809 743 VREAVDFLRYYAG-QVRDDFD---------NDTHRPLGPVVCISPWN---FPLAIFTGQVAAALAAGNS--VLAKPAEQT 807 (1318)
T ss_pred HHHHHHHHHHHHH-HHHHhcC---------CceeecccEEEEECCCc---cHHHHHHHHHHHHHHcCCe--EEEeCCCCc
Confidence 5556666665543 3322211 13588999999999974 665444 466699999985 334454211
Q ss_pred CCCCHHHHHHHHHcCCc-chhh-c-c-hHHHHHHHhhCCCCCCCceEEecCCcHHHHH------HHHHhcCCCCc-c-cc
Q 016315 209 GSICKEVLYCAKKAGVT-HILK-A-G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTA------AKMILQNSEAM-I-SI 276 (391)
Q Consensus 209 G~i~p~iLaAA~laGv~-eIy~-v-G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~------AKr~v~~~~g~-V-gI 276 (391)
-.+.-.+....+.+|+- .++. + | |...-++|. +-|+||.|.=-|..=|.. |+++-.. |. + -|
T Consensus 808 pl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv----~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~--g~~~pli 881 (1318)
T PRK11809 808 PLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALV----ADARVRGVMFTGSTEVARLLQRNLAGRLDPQ--GRPIPLI 881 (1318)
T ss_pred HHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHh----cCCCcCEEEEeCCHHHHHHHHHHHhhhcccc--cCceeEE
Confidence 11111122344556663 2222 2 3 333333343 358888887666654432 2222000 00 0 00
Q ss_pred cCCCCCcEEEEEecCCCCHHHHHHHHHhhhcc----CCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 277 DMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 277 D~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEH----dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
==.-|-+ .+|-|++||++.++.|.+.=|=. --.|...|+. .++++ +++.+.+...++++
T Consensus 882 aElGGkN--a~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V-~e~Ia-d~fl~~L~~a~~~l 944 (1318)
T PRK11809 882 AETGGQN--AMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCL-QDDVA-DRTLKMLRGAMAEC 944 (1318)
T ss_pred EecCCcc--ceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEE-cHHHH-HHHHHHHHHHHHhc
Confidence 0011222 35668999999999999743311 1122223332 55576 87777777766654
No 91
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=42.25 E-value=19 Score=39.53 Aligned_cols=48 Identities=21% Similarity=0.268 Sum_probs=35.5
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|+++|++.|+.-+..---++..||++||.+.+.-+=-.-| ||++||..
T Consensus 140 v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptA-AAl~y~~~ 187 (653)
T PTZ00009 140 VKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTA-AAIAYGLD 187 (653)
T ss_pred cceeEEEeCCCCCHHHHHHHHHHHHHcCCceeEEecchHH-HHHHHhhh
Confidence 5778888887533222346999999999998777777766 88999974
No 92
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=40.67 E-value=4.3e+02 Score=27.27 Aligned_cols=165 Identities=14% Similarity=0.144 Sum_probs=87.4
Q ss_pred EEEEEEecceeeEeecCCCCCCchHhh-hhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhh--cchH
Q 016315 159 CKRVARSIGSVGLYVPGGTAVLPSTAL-MLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILK--AGGA 233 (391)
Q Consensus 159 ~Gqr~~PierVGlYVPGG~a~ypSTvL-M~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~--vGGA 233 (391)
.--++.|+.-|+++.|. -||-... ...+||-.||+.=|+ -|+. ...... .+......+|+. .++. .|+.
T Consensus 90 ~~~~~~P~GvV~~I~P~---N~Pl~~~~~~~~~ALaaGN~VV~--Kps~-~~p~~~~~l~~~l~~aglP~gvv~~v~g~~ 163 (429)
T cd07100 90 AYVRYEPLGVVLGIMPW---NFPFWQVFRFAAPNLMAGNTVLL--KHAS-NVPGCALAIEELFREAGFPEGVFQNLLIDS 163 (429)
T ss_pred EEEEEEeeeEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEE--ECCC-cchHHHHHHHHHHHHcCCCcCcEEEEeCCc
Confidence 34578999999999996 3565433 457899999986443 3432 111222 233444566653 4433 3433
Q ss_pred HHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhcc---
Q 016315 234 QAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH--- 308 (391)
Q Consensus 234 QAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEH--- 308 (391)
....+|. .-|++|+|.==|+.=+-.. ++.... --.+...+ .|-+=++| |++||.+.+|-.++.=+=+
T Consensus 164 ~~~~~l~----~~~~i~~v~fTGs~~~g~~i~~~aa~~-~~~~~lel-gG~~p~iV--~~daDl~~aa~~i~~~~~~~~G 235 (429)
T cd07100 164 DQVEAII----ADPRVRGVTLTGSERAGRAVAAEAGKN-LKKSVLEL-GGSDPFIV--LDDADLDKAVKTAVKGRLQNAG 235 (429)
T ss_pred hhHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhc-CcceEEec-CCCCeeEE--CCCCCHHHHHHHHHHHHHhccC
Confidence 3434442 3578999887777633211 111100 00133333 36664444 5678999888776642222
Q ss_pred -CCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 309 -GPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 309 -dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.-.|...++.. ++.. ++..+.+.+.++.+
T Consensus 236 Q~C~a~~rv~v~-~~i~-~~f~~~l~~~~~~~ 265 (429)
T cd07100 236 QSCIAAKRFIVH-EDVY-DEFLEKFVEAMAAL 265 (429)
T ss_pred CCCCCCeEEEEc-HHHH-HHHHHHHHHHHHhc
Confidence 22233333333 3454 66666666665554
No 93
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=40.14 E-value=5e+02 Score=27.84 Aligned_cols=167 Identities=14% Similarity=0.144 Sum_probs=86.4
Q ss_pred ceEEEEEEEec-ceeeEeecCCCCCCchHhhhhc-cceeecCCCeEEEEcCCCCCCCCCHHH-HHHHHHcCCc-chhhc-
Q 016315 156 GVRCKRVARSI-GSVGLYVPGGTAVLPSTALMLS-VPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVT-HILKA- 230 (391)
Q Consensus 156 Gv~~Gqr~~Pi-erVGlYVPGG~a~ypSTvLM~a-IPAkVAGV~~Ivv~TPP~~~G~i~p~i-LaAA~laGv~-eIy~v- 230 (391)
|...-.+++|+ .-|++..|. -||..+.|.. +||- ||+. |++-|+... ...... ..+...+|.. .++.+
T Consensus 160 ~~~~~~~~~P~~GVv~~I~Pw---NfP~~~~~~~~~pal-aGN~--VVlKPs~~t-p~~~~~l~~~l~~aGlP~gvv~vv 232 (522)
T cd07123 160 GVWNRLEYRPLEGFVYAVSPF---NFTAIGGNLAGAPAL-MGNV--VLWKPSDTA-VLSNYLVYKILEEAGLPPGVINFV 232 (522)
T ss_pred CceeEEEEecCCceEEEECCc---ccHHHHHHHHHHHHH-hCCE--EEEECCCCC-CHHHHHHHHHHHHcCcCCCcEEEE
Confidence 44445678999 999999997 4777666655 4666 7877 334454221 122222 3445567764 33332
Q ss_pred -c-hHHHHHHHhhCCCCCCCceEEecCCcHHHH------HHHHHhc-CCCCcccccCCCCCcEEEEEecCCCCHHHHHHH
Q 016315 231 -G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQ-NSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 301 (391)
Q Consensus 231 -G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AKr~v~-~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaD 301 (391)
| |...-.+|. +-|+||+|.==|..-|- +|+++-. .....|.. -+-|-+ -+|-+++||.+.+|-+
T Consensus 233 ~g~~~~~g~~L~----~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~l-ElGGkn--~~IV~~dAdl~~Aa~~ 305 (522)
T cd07123 233 PGDGPVVGDTVL----ASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVG-ETGGKN--FHLVHPSADVDSLVTA 305 (522)
T ss_pred ecCchHHHHHHh----cCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEE-ECCCCC--eeEECCCCCHHHHHHH
Confidence 3 444334444 25889999877776443 3333210 00000111 133444 3344456899988766
Q ss_pred HHhhhccCC----CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 302 LLSQAEHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 302 LLaQAEHdp----~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
++.=+=+.. .+ +-++|-.| .. +++.+.+.+.++.+
T Consensus 306 i~~~~f~~aGQ~C~a~~rv~V~~~--i~-d~f~~~l~~~~~~l 345 (522)
T cd07123 306 TVRGAFEYQGQKCSAASRAYVPES--LW-PEVKERLLEELKEI 345 (522)
T ss_pred HHHHHHhcCCCCCCCCcEEEEcHH--HH-HHHHHHHHHHHhhC
Confidence 654332211 12 23555333 44 55555555555444
No 94
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes. In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.
Probab=39.39 E-value=34 Score=34.84 Aligned_cols=74 Identities=16% Similarity=0.254 Sum_probs=40.9
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 275 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~Vg 275 (391)
=+++++|.|..-...---++..|++-+|+++||-+-=. --||+.-|.. +....|..-
T Consensus 93 ~p~vvi~vP~~~T~verrA~~~a~~~aGa~~V~li~ep-~AaAiGaGl~----------------------i~~~~g~mi 149 (326)
T PF06723_consen 93 RPRVVICVPSGITEVERRALIDAARQAGARKVYLIEEP-IAAAIGAGLD----------------------IFEPRGSMI 149 (326)
T ss_dssp --EEEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHH-HHHHHHTT------------------------TTSSS-EEE
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecch-HHHHhcCCCC----------------------CCCCCceEE
Confidence 45778888874222112367788888899988888655 2234444432 111122355
Q ss_pred ccCCCCCcEEEEEecCC
Q 016315 276 IDMPAGPSEVLVIADIY 292 (391)
Q Consensus 276 ID~~AGPSEvlVIAD~t 292 (391)
+|.=+|=||+.||+.+.
T Consensus 150 VDIG~GtTdiavislgg 166 (326)
T PF06723_consen 150 VDIGGGTTDIAVISLGG 166 (326)
T ss_dssp EEE-SS-EEEEEEETTE
T ss_pred EEECCCeEEEEEEECCC
Confidence 88889999999998763
No 95
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=37.80 E-value=4.9e+02 Score=27.07 Aligned_cols=237 Identities=13% Similarity=0.133 Sum_probs=116.9
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceE
Q 016315 73 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSV 151 (391)
Q Consensus 73 ~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A~l~~~~~~Ai~~A~~nI~~FH~~Q~~-~~~~~ 151 (391)
..+-.+..+.+-+.++++.|+=..-.++.-.+-. ..+..+ ..+. ...+.++.++++++++...+.. .++..
T Consensus 19 ~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~-----~~ea~~--~ev~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (434)
T cd07133 19 LEERRDRLDRLKALLLDNQDALAEAISADFGHRS-----RHETLL--AEIL-PSIAGIKHARKHLKKWMKPSRRHVGLLF 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-----hHHHHH--HHHH-HHHHHHHHHHHHHHHHhCCcccCCcccc
Confidence 3344455666666677777664444444333200 000000 0122 3556667777777766544432 12211
Q ss_pred EecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHH-HHHHHc---CCcc
Q 016315 152 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKA---GVTH 226 (391)
Q Consensus 152 ~~~~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iL-aAA~la---Gv~e 226 (391)
.+...-.++.|+.-|++..|. -|| ...+...+||-.||+.=|+ -|+. ........+ ...+.+ |+=.
T Consensus 91 ---~~~~~~~~~~P~Gvv~~I~pw---N~P~~~~~~~~~~ALaaGN~vvl--Kps~-~~p~~~~~l~~l~~~alP~g~~~ 161 (434)
T cd07133 91 ---LPAKAEVEYQPLGVVGIIVPW---NYPLYLALGPLIAALAAGNRVMI--KPSE-FTPRTSALLAELLAEYFDEDEVA 161 (434)
T ss_pred ---CCCceEEEEecccEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEE--ECCC-cChHHHHHHHHHHHHhCCcCeEE
Confidence 132345688999999999996 367 4666677899999986443 3432 111111111 111222 2222
Q ss_pred hhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHH-HhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhh
Q 016315 227 ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 305 (391)
Q Consensus 227 Iy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr-~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQ 305 (391)
+. .||...-.+|. . ++||+|.=-|..-+-..-. .....--.+... +.|-+=++| +++||.+.+|-.++.-
T Consensus 162 ~v-~g~~~~~~~l~----~-~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lE-lgGk~~~iV--~~dadl~~aa~~i~~~ 232 (434)
T cd07133 162 VV-TGGADVAAAFS----S-LPFDHLLFTGSTAVGRHVMRAAAENLTPVTLE-LGGKSPAII--APDADLAKAAERIAFG 232 (434)
T ss_pred EE-eCChHHHHHHH----h-CCCCEEEEeCchHHHHHHHHHHHhcCceEEEE-ccCCCcEEE--eCCCCHHHHHHHHHHH
Confidence 22 24544333444 1 3499998888876543311 111000002122 346654444 3458999988887754
Q ss_pred hccCC----CCceEEEecCchHHHHHHHHHHHHHHh
Q 016315 306 AEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQ 337 (391)
Q Consensus 306 AEHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~ 337 (391)
+=... .|...++. .++.. ++..+.+.++++
T Consensus 233 ~~~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~ 266 (434)
T cd07133 233 KLLNAGQTCVAPDYVLV-PEDKL-EEFVAAAKAAVA 266 (434)
T ss_pred HhccCCCcccCCCEEEE-cHHHH-HHHHHHHHHHHH
Confidence 33322 22223333 33344 555555555554
No 96
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=36.73 E-value=98 Score=30.38 Aligned_cols=71 Identities=24% Similarity=0.256 Sum_probs=45.8
Q ss_pred eEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccccc
Q 016315 198 TVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISID 277 (391)
Q Consensus 198 ~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID 277 (391)
.+|++.|...+..---.+..|+..+|++.++-+=-+-| ||++||+.. + .+ .+ .+-+|
T Consensus 98 ~~vi~vP~~~~~~~r~~~~~a~~~ag~~~~~li~ep~a-aa~~~g~~~----~---~~-----------~~----~lvvD 154 (334)
T PRK13927 98 RVVICVPSGITEVERRAVRESALGAGAREVYLIEEPMA-AAIGAGLPV----T---EP-----------TG----SMVVD 154 (334)
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCCeeccCCChHH-HHHHcCCcc----c---CC-----------Ce----EEEEE
Confidence 45555555332222346778999999999998775544 678898742 0 01 01 25678
Q ss_pred CCCCCcEEEEEecC
Q 016315 278 MPAGPSEVLVIADI 291 (391)
Q Consensus 278 ~~AGPSEvlVIAD~ 291 (391)
+=+|-+++.++..+
T Consensus 155 iGggttdvs~v~~~ 168 (334)
T PRK13927 155 IGGGTTEVAVISLG 168 (334)
T ss_pred eCCCeEEEEEEecC
Confidence 88899999888543
No 97
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=36.36 E-value=30 Score=38.30 Aligned_cols=49 Identities=18% Similarity=0.258 Sum_probs=34.3
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTES 245 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTet 245 (391)
|++.|+..|+.-+-.---++..||.++|.+-+--+=-.-| ||+|||...
T Consensus 160 v~~aVITVPayF~~~qR~at~~Aa~~AGl~v~rlInEPtA-AAlayg~~~ 208 (657)
T PTZ00186 160 VSNAVVTCPAYFNDAQRQATKDAGTIAGLNVIRVVNEPTA-AALAYGMDK 208 (657)
T ss_pred cceEEEEECCCCChHHHHHHHHHHHHcCCCeEEEEcChHH-HHHHHhccC
Confidence 5677777787533223346889999999987666666655 688999753
No 98
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=36.09 E-value=30 Score=37.57 Aligned_cols=49 Identities=20% Similarity=0.250 Sum_probs=33.8
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTES 245 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTet 245 (391)
|++.|++.|+.-+..---++..||+++|.+.+.-+=-..| ||++||.+.
T Consensus 129 v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtA-AAlay~~~~ 177 (599)
T TIGR01991 129 LVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTA-AAVAYGLDK 177 (599)
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHHcCCCceEEecCHHH-HHHHHhhcc
Confidence 4667777776433222336889999999987777776655 578998753
No 99
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=34.78 E-value=27 Score=36.66 Aligned_cols=177 Identities=12% Similarity=0.177 Sum_probs=102.7
Q ss_pred cceeeEeecCCC-CCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHH----HcCCcchhhcchHHHHHH--
Q 016315 166 IGSVGLYVPGGT-AVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAK----KAGVTHILKAGGAQAISA-- 238 (391)
Q Consensus 166 ierVGlYVPGG~-a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~----laGv~eIy~vGGAQAIAA-- 238 (391)
++++=+.-|-++ ......+|- -|+.+|+++|+.+= | -.+|.+.|+ +-.||.|+=-|.+---+|
T Consensus 123 V~~Iv~~TPp~~~g~i~p~iL~---aa~~~Gv~eiy~vG-----G--aQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~ 192 (390)
T cd06572 123 VKEIVVVTPPRKDGKINPAILA---AAKLAGVDEIYKVG-----G--AQAIAALAYGTETIPKVDKIVGPGNIYVTAAKR 192 (390)
T ss_pred CCeEEEEeCcCCCCCCCHHHHH---HHHHcCCcEEeccC-----C--HHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHH
Confidence 344444445432 123334433 57999999999873 2 235544444 344777777777655555
Q ss_pred HhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCC----C-CcEEEEEecCCCCHHHHHHHHHhhhccCCCC-
Q 016315 239 MAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPA----G-PSEVLVIADIYASPVHIAADLLSQAEHGPDS- 312 (391)
Q Consensus 239 lAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~A----G-PSEvlVIAD~tAnP~~VAaDLLaQAEHdp~a- 312 (391)
+-||+- ..|++.||-.+-|-+=..---. .|.-|+++ | -|-.+.|.++..-.+.|..-+-.|.+.-|..
T Consensus 193 ~v~g~V---~ID~~AGPSEvlIiAD~~A~p~---~vAaDLLaQAEH~~~a~aiLvT~s~~la~~V~~~v~~ql~~l~r~~ 266 (390)
T cd06572 193 LVSGDV---GIDMPAGPSEVLVIADETANPE---FVAADLLSQAEHDPDSQAILVTTSEELAEAVEEEVERQLAELPRRE 266 (390)
T ss_pred HhcCCc---CccCCCCCceEEEEeCCCCCHH---HHHHHHHhhhccCCCCeEEEEECCHHHHHHHHHHHHHHHHhCCcHH
Confidence 357753 7899999976544321110000 13334443 3 3667778887777777888887787665543
Q ss_pred ---------ceEEEecCchHHHHHHHHHHHHHHhcCCc-HHHHHHHhhC-CeEEEEC
Q 016315 313 ---------QVVLVIVGDGVDLDAIEQEISKQCQSLPR-GEFASKALGH-SFMVFAR 358 (391)
Q Consensus 313 ---------~aiLvT~s~~la~~~V~~ei~~ql~~lpr-~~ia~~sl~~-g~iivv~ 358 (391)
..++++.|.+-+++-.+.--.++|+-+-+ .+-....++| |.|++=+
T Consensus 267 ~~~~~~~~~g~ii~~~~~~eai~~~N~~APEHLel~~~~~~~~l~~i~nAGsiFlG~ 323 (390)
T cd06572 267 IAAKSLLDYGAIILVDDLEEAIELANEYAPEHLELQTEDPEELLEKIRNAGSIFLGP 323 (390)
T ss_pred HHHHHHHhCCEEEEECCHHHHHHHHHhhchhhheeHhcCHHHHHhhCccceEEeecC
Confidence 57888899877734444444456655443 2333444555 7777644
No 100
>PRK02399 hypothetical protein; Provisional
Probab=33.87 E-value=58 Score=34.55 Aligned_cols=88 Identities=26% Similarity=0.337 Sum_probs=63.5
Q ss_pred CCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHH--------HHHHHHcCCcchhhc---chHHHHHHHhhCC
Q 016315 175 GGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV--------LYCAKKAGVTHILKA---GGAQAISAMAWGT 243 (391)
Q Consensus 175 GG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~i--------LaAA~laGv~eIy~v---GGAQAIAAlAYGT 243 (391)
|+.....-|-.|.+.|- |+|.++|-|=.. |.+.|++ ....+++|.+.|-+. =.|.|||.|+.+.
T Consensus 104 Gs~GT~lat~aMr~LPi---G~PKlmVSTmAs--g~~~~yvg~sDI~mm~SV~DiaGlN~isr~vl~NAA~aiaGm~~~~ 178 (406)
T PRK02399 104 GSGGTALATPAMRALPI---GVPKLMVSTMAS--GDVSPYVGASDIAMMYSVTDIAGLNRISRQVLSNAAGAIAGMVKFE 178 (406)
T ss_pred CcchHHHHHHHHHhCCC---CCCeEEEEcccc--CCCcCccccCCEEEeccccccccchHHHHHHHHHHHHHHHHHhhcc
Confidence 55667778888999995 999999998764 4455543 456788898766553 4577899999875
Q ss_pred CCCCCceEEe------cCCcHHHHHHHHHh
Q 016315 244 ESCPKVEKIF------GPGNQYVTAAKMIL 267 (391)
Q Consensus 244 etIpkVDkIv------GPGN~YVt~AKr~v 267 (391)
...+.-||=. |=-..+|..+|..+
T Consensus 179 ~~~~~~~kp~Ig~TmfGvTtp~v~~~~~~L 208 (406)
T PRK02399 179 QPAPSDDKPLIGLTMFGVTTPCVQAAREEL 208 (406)
T ss_pred ccCCCCCCceEEEecCCCcHHHHHHHHHHH
Confidence 5444444433 88889999998854
No 101
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=32.81 E-value=6e+02 Score=26.65 Aligned_cols=160 Identities=22% Similarity=0.233 Sum_probs=90.2
Q ss_pred EEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCH-HHHHHHHHcCCc-chhhc--c-
Q 016315 158 RCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA--G- 231 (391)
Q Consensus 158 ~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p-~iLaAA~laGv~-eIy~v--G- 231 (391)
....++.|+.-|++..|.- ||-. .++..+||-.||+.=|+ -|+... .... .+..+...+|.. .++.+ |
T Consensus 134 ~~~~~~~P~GVv~~I~pwN---~P~~~~~~~i~~ALaaGN~VV~--KPs~~t-p~~~~~l~~~~~~aGlP~gvv~~v~g~ 207 (476)
T cd07142 134 HVYTLHEPIGVVGQIIPWN---FPLLMFAWKVGPALACGNTIVL--KPAEQT-PLSALLAAKLAAEAGLPDGVLNIVTGF 207 (476)
T ss_pred eEEEEEeceeeEEEECCCc---cHHHHHHHHHHHHHHcCCEEEE--ECCCcc-cHHHHHHHHHHHHcCcCcccEEEEeCC
Confidence 4456789999999999964 6644 45678899999997444 344211 1122 233344556663 34432 3
Q ss_pred hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHH-HHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 232 GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 232 GAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AK-r~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
|...-.+|. +-|+||+|+=-|..-+ .+|+ .+ - .|-..+ .|-+=+ |-+++||.+..|-.++.
T Consensus 208 ~~~~~~~L~----~~~~v~~v~fTGs~~~G~~v~~~aa~~~~-~----~v~lEl-gGk~p~--iV~~dADl~~Aa~~i~~ 275 (476)
T cd07142 208 GPTAGAAIA----SHMDVDKVAFTGSTEVGKIIMQLAAKSNL-K----PVTLEL-GGKSPF--IVCEDADVDKAVELAHF 275 (476)
T ss_pred chhHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHHcCC-C----eEEEEC-CCCCee--EECCCCCHHHHHHHHHH
Confidence 333333443 3588999987777553 2232 11 0 132322 455533 33567999998887776
Q ss_pred hhccCC----CC-ceEEEecCchHHHHHHHHHHHHHHhc
Q 016315 305 QAEHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQS 338 (391)
Q Consensus 305 QAEHdp----~a-~aiLvT~s~~la~~~V~~ei~~ql~~ 338 (391)
-+=+.. .+ +-++| .++.. +++.+.+.+++..
T Consensus 276 ~~f~~aGQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~ 311 (476)
T cd07142 276 ALFFNQGQCCCAGSRTFV--HESIY-DEFVEKAKARALK 311 (476)
T ss_pred HHhcCCCCCCCCCeeEEE--eHHHH-HHHHHHHHHHHHh
Confidence 554432 12 22445 33455 6666666655544
No 102
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=32.69 E-value=6.1e+02 Score=26.65 Aligned_cols=163 Identities=14% Similarity=0.202 Sum_probs=89.2
Q ss_pred EEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhh-c-chH
Q 016315 158 RCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILK-A-GGA 233 (391)
Q Consensus 158 ~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~-v-GGA 233 (391)
..-.++.|+.-|++..|. -||- +.++..+||-.||+.=|+--+|-.+ ...-.+..++..+|+. .++. + |..
T Consensus 119 ~~~~~~~P~GvV~~I~Pw---N~P~~~~~~~~~~ALaaGN~vv~KPs~~tp--~~~~~l~~~~~~aGlP~gv~~~v~g~~ 193 (462)
T PRK13968 119 QAVIEYRPLGTILAIMPW---NFPLWQVMRGAVPILLAGNGYLLKHAPNVM--GCAQLIAQVFKDAGIPQGVYGWLNADN 193 (462)
T ss_pred eEEEEEeccceEEEEcCC---chHHHHHHHHHHHHHHcCCEEEEECCCcCh--HHHHHHHHHHHHcCcCcCcEEEEecCc
Confidence 344567999999999996 3663 4555788999999864443333211 0111223334556652 2211 1 322
Q ss_pred HHHHHHhhCCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhc
Q 016315 234 QAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAE 307 (391)
Q Consensus 234 QAIAAlAYGTetIpkVDkIvGPGN~Y------Vt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAE 307 (391)
.-.++|. .-|+||+|.=-|..= ..+|+++. .|...+ .|.+=++| |++||.+..|-.++.-+=
T Consensus 194 ~~~~~l~----~~~~v~~V~fTGs~~~G~~i~~~aa~~l~-----~~~lEl-GGk~p~iV--~~dAdl~~aa~~i~~~~~ 261 (462)
T PRK13968 194 DGVSQMI----NDSRIAAVTVTGSVRAGAAIGAQAGAALK-----KCVLEL-GGSDPFIV--LNDADLELAVKAAVAGRY 261 (462)
T ss_pred hhhHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhcCC-----cEEEec-CCCCceEE--CCCCCHHHHHHHHHHHHH
Confidence 2233332 458899998888832 22222210 122222 35554444 456899999988875444
Q ss_pred cCC----CCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 308 HGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 308 Hdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
... .|...++. .+++. ++..+.+.+.++.+
T Consensus 262 ~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~~ 295 (462)
T PRK13968 262 QNTGQVCAAAKRFII-EEGIA-SAFTERFVAAAAAL 295 (462)
T ss_pred hccCCCCcCCcEEEE-CHhHH-HHHHHHHHHHHhcC
Confidence 333 23333443 34565 77777777766655
No 103
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=32.09 E-value=5.9e+02 Score=26.32 Aligned_cols=192 Identities=18% Similarity=0.178 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCC
Q 016315 129 AFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQ 207 (391)
Q Consensus 129 Ai~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~ 207 (391)
-+..++++++.|.+..++..+.. ..+|.....+++|+.-|++..|. -||- +.+...+||-.||+.=| +-|+.
T Consensus 79 ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~~~~ALaaGN~Vi--lKps~- 151 (446)
T cd07106 79 EVGGAVAWLRYTASLDLPDEVIE-DDDTRRVELRRKPLGVVAAIVPW---NFPLLLAAWKIAPALLAGNTVV--LKPSP- 151 (446)
T ss_pred HHHHHHHHHHHHHhhhhcCcccc-CCCCceEEEEEEcceEEEEEcCC---ChHHHHHHHHHHHHHHcCCEEE--EECCc-
Confidence 46667777777765544333322 22355567788999999999994 3553 44556789999998644 33442
Q ss_pred CCCCCHHHHHHHHHc----CCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCC
Q 016315 208 DGSICKEVLYCAKKA----GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAG 281 (391)
Q Consensus 208 ~G~i~p~iLaAA~la----Gv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A--Kr~v~~~~g~VgID~~AG 281 (391)
........|+.+-.- |+=.+.. |+...-.+|. +-|.+|+|.=-|..=|-.. |..-.. -..+...+ -|
T Consensus 152 ~~p~~~~~l~~~~~~~lP~g~~~~v~-g~~~~~~~l~----~~~~vd~V~fTGs~~~g~~v~~~aa~~-~~~~~lEl-GG 224 (446)
T cd07106 152 FTPLCTLKLGELAQEVLPPGVLNVVS-GGDELGPALT----SHPDIRKISFTGSTATGKKVMASAAKT-LKRVTLEL-GG 224 (446)
T ss_pred cchHHHHHHHHHHHHhCCcCeEEEee-CChhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhc-CCeeEEec-CC
Confidence 111222222222111 3333332 4544333443 3578999887777655332 211110 00144444 45
Q ss_pred CcEEEEEecCCCCHHHHHHHHHhhhccCCC----C-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 282 PSEVLVIADIYASPVHIAADLLSQAEHGPD----S-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 282 PSEvlVIAD~tAnP~~VAaDLLaQAEHdp~----a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.+=+ |-|++||.+..|-.++.-+=+..- | +-++| .++.. ++..+.+.+.++.+
T Consensus 225 ~~p~--iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V--~~~v~-d~f~~~l~~~~~~~ 282 (446)
T cd07106 225 NDAA--IVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYV--HESIY-DEFCEALVALAKAA 282 (446)
T ss_pred CCee--EECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEE--ccccH-HHHHHHHHHHHHhc
Confidence 5533 344679999999988876555331 2 23555 33455 77777777766655
No 104
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=31.21 E-value=6.1e+02 Score=26.20 Aligned_cols=159 Identities=18% Similarity=0.186 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCC
Q 016315 128 EAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPS 206 (391)
Q Consensus 128 ~Ai~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~ 206 (391)
+.++.+++.++.++......... ...+...-.++.|+.-|++..|+- +|- +++...+||-.+|..=|+- |+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aL~aGN~vvlK--ps~ 137 (426)
T cd07087 65 GEIDHALKHLKKWMKPRRVSVPL--LLQPAKAYVIPEPLGVVLIIGPWN---YPLQLALAPLIGAIAAGNTVVLK--PSE 137 (426)
T ss_pred HHHHHHHHHHHHHhCCcccCCcc--ccCCCceEEEEecCcEEEEEcCCc---hHHHHHHHHHHHHHHcCCEEEEE--CCc
Confidence 34555555555554322111110 112334456789999999999953 564 5666788999999875543 442
Q ss_pred CCCCCCHHHHHHHHHcCC----cchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHH-HHhcCCCCcccccCCCC
Q 016315 207 QDGSICKEVLYCAKKAGV----THILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQNSEAMISIDMPAG 281 (391)
Q Consensus 207 ~~G~i~p~iLaAA~laGv----~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AK-r~v~~~~g~VgID~~AG 281 (391)
.. ...+..++.+-..|+ =.+.. |+.+...+|.= -| +|+|+=-|..-+..+= +........+-.. +.|
T Consensus 138 ~~-p~~~~~l~~~~~~~~P~gv~~vv~-g~~~~~~~l~~----~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~le-lgG 209 (426)
T cd07087 138 LA-PATSALLAKLIPKYFDPEAVAVVE-GGVEVATALLA----EP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLE-LGG 209 (426)
T ss_pred cC-HHHHHHHHHHHHHhCCCCEEEEEe-CCchHHHHHHh----CC-CCEEEEeCChHHHHHHHHHHHhhCCceEEe-ccC
Confidence 11 122223332222233 23332 55444444431 25 9999988887653321 1111000002222 335
Q ss_pred CcEEEEEecCCCCHHHHHHHHH
Q 016315 282 PSEVLVIADIYASPVHIAADLL 303 (391)
Q Consensus 282 PSEvlVIAD~tAnP~~VAaDLL 303 (391)
-+=+ |-+++||.+.+|-.++
T Consensus 210 ~~~~--iV~~dadl~~aa~~i~ 229 (426)
T cd07087 210 KSPC--IVDKDANLEVAARRIA 229 (426)
T ss_pred CCce--EecCCCCHHHHHHHHH
Confidence 5433 3355689888776665
No 105
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=31.16 E-value=6.5e+02 Score=26.54 Aligned_cols=188 Identities=18% Similarity=0.198 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEc
Q 016315 126 VKEAFDVAYNNIYAFHLAQK-SAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLAT 203 (391)
Q Consensus 126 ~~~Ai~~A~~nI~~FH~~Q~-~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~T 203 (391)
..+-++..++.++.++..+. +.++. ..|...-.++.|+.-|+++.|.- ||... +...+||-.||+.= ++=
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N---~P~~~~~~~~~~ALaaGN~v--i~K 134 (449)
T cd07136 63 VLSEINYAIKHLKKWMKPKRVKTPLL---NFPSKSYIYYEPYGVVLIIAPWN---YPFQLALAPLIGAIAAGNTA--VLK 134 (449)
T ss_pred HHHHHHHHHHHHHHHhCCCccCCccc---cCCceeEEEEecCeEEEEECCCc---hHHHHHHHHHHHHHhcCCEE--EEE
Confidence 34445566666666654432 11110 12333345678999999999963 66444 44567999999843 333
Q ss_pred CCCCCCCCCHHHHHHH-HH---cCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCc
Q 016315 204 PPSQDGSICKEVLYCA-KK---AGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAM 273 (391)
Q Consensus 204 PP~~~G~i~p~iLaAA-~l---aGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~ 273 (391)
|+. .-......++-+ +. .|+=.+.. |+.+...+|. . ++||+|.=-|..=+ ++|+.+. .
T Consensus 135 ps~-~tp~~~~~l~~~~~~alP~gv~~~v~-g~~~~~~~L~--~---~~v~~V~fTGS~~~g~~i~~~aa~~~~-~---- 202 (449)
T cd07136 135 PSE-LTPNTSKVIAKIIEETFDEEYVAVVE-GGVEENQELL--D---QKFDYIFFTGSVRVGKIVMEAAAKHLT-P---- 202 (449)
T ss_pred Ccc-cchHHHHHHHHHHHHhCCCCEEEEEe-CChHHHHHHh--c---CCCCEEEEECCHHHHHHHHHHHHhcCC-C----
Confidence 432 111111122211 11 33333333 5555556665 1 34888877776533 2222110 0
Q ss_pred ccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCC----Cc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 274 ISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPD----SQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 274 VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~----a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
|... +.|-+=++| +++||.+..+..++.-+=+..- |. -++| .++.+ ++..+.+.+.++.+
T Consensus 203 v~lE-lgGknp~iV--~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V--~~~i~-d~f~~~L~~~~~~~ 267 (449)
T cd07136 203 VTLE-LGGKSPCIV--DEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLV--HESVK-EKFIKELKEEIKKF 267 (449)
T ss_pred EEEE-ecCCCeEEE--CCCCCHHHHHHHHHHHHHcccCCcccCCCEEEE--cHHHH-HHHHHHHHHHHHHh
Confidence 2111 245444444 4569999988888876665432 22 2444 33455 66666666555554
No 106
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=30.79 E-value=1.3e+02 Score=29.76 Aligned_cols=73 Identities=16% Similarity=0.250 Sum_probs=47.5
Q ss_pred CeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccc
Q 016315 197 KTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISI 276 (391)
Q Consensus 197 ~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgI 276 (391)
++++++.|+..+..---.+.-|+..+|++.++-+=...| ||++||++. ++ | .+ .+-+
T Consensus 96 p~~vitvP~~~~~~~r~~~~~a~~~ag~~~~~li~ep~A-aa~~~g~~~----~~---~-----------~~----~lVv 152 (336)
T PRK13928 96 PRIMICIPTGITSVEKRAVREAAEQAGAKKVYLIEEPLA-AAIGAGLDI----SQ---P-----------SG----NMVV 152 (336)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCceEecccHHH-HHHHcCCcc----cC---C-----------Ce----EEEE
Confidence 355666665433223346778889999998888866644 567888731 11 0 01 2457
Q ss_pred cCCCCCcEEEEEecCC
Q 016315 277 DMPAGPSEVLVIADIY 292 (391)
Q Consensus 277 D~~AGPSEvlVIAD~t 292 (391)
|+=+|=+++.|+.++.
T Consensus 153 DiGggttdvsvv~~g~ 168 (336)
T PRK13928 153 DIGGGTTDIAVLSLGG 168 (336)
T ss_pred EeCCCeEEEEEEEeCC
Confidence 8889999999998763
No 107
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=30.46 E-value=6.4e+02 Score=26.21 Aligned_cols=168 Identities=17% Similarity=0.179 Sum_probs=83.8
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCC-cchhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV-THILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv-~eIy~v--G 231 (391)
|...-.++.|+.-|+++.|.- ||-.. +...+||-.||+.=|+ -|.. .-......|+-+-..+. +.++.+ |
T Consensus 107 ~~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~~~~ALaaGN~VV~--Kps~-~~p~~~~~l~~~~~~~lP~gvv~~v~g 180 (456)
T cd07107 107 RNLHYTLREPYGVVARIVAFN---HPLMFAAAKIAAPLAAGNTVVV--KPPE-QAPLSALRLAELAREVLPPGVFNILPG 180 (456)
T ss_pred CceEEEEEecceEEEEECCcc---cHHHHHHHHHhHHHHcCCEEEE--eCCC-CChHHHHHHHHHHHHhCCcCcEEEEeC
Confidence 333446678999999999963 77654 4577899999997443 3432 11122223322211122 233332 3
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHH--HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhh--
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYV--TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA-- 306 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YV--t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQA-- 306 (391)
|...-.+|. +-|.+|+|.==|..=| .-+++.... ...|-. -+.|.+=++ -|++||.+..|-.++.-+
T Consensus 181 ~~~~~~~~l~----~~~~i~~v~fTGs~~~g~~i~~~aa~~-~~~~~l-ElgG~~p~i--V~~dadl~~Aa~~i~~~~~f 252 (456)
T cd07107 181 DGATAGAALV----RHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTL-ELGGKNALI--VFPDADPEAAADAAVAGMNF 252 (456)
T ss_pred CCchHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhcC-CCeEEE-ECCCCCeEE--ECCCCCHHHHHHHHHHhchh
Confidence 322223333 3588999943343221 111111100 000222 233655444 456799998777776542
Q ss_pred cc-C--CCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 307 EH-G--PDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 307 EH-d--p~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-+ | -.|...++. .++.. +++.+.+.+.++.+
T Consensus 253 ~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~l 286 (456)
T cd07107 253 TWCGQSCGSTSRLFV-HESIY-DEVLARVVERVAAI 286 (456)
T ss_pred hcCCCCCcCCcEEEE-cHHHH-HHHHHHHHHHHHhC
Confidence 32 2 223333333 34455 66777666665554
No 108
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=30.40 E-value=43 Score=36.64 Aligned_cols=48 Identities=21% Similarity=0.276 Sum_probs=29.5
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
+.+.|++.|+.-+-.---++..||+++|.+.+.-+=-..| ||++||..
T Consensus 149 v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtA-AAlay~~~ 196 (616)
T PRK05183 149 LDGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTA-AAIAYGLD 196 (616)
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecchHH-HHHHhhcc
Confidence 4566666666422222236778888888876666655544 45788764
No 109
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=30.19 E-value=38 Score=27.31 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=28.5
Q ss_pred EEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHH
Q 016315 200 VLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAIS 237 (391)
Q Consensus 200 vv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIA 237 (391)
++.|+ . .+++.+....+..++++||-+||..+|.
T Consensus 53 Ill~~-~---~l~~~~~~~l~~~~~~~v~iiGg~~~is 86 (92)
T PF04122_consen 53 ILLVN-N---SLPSSVKAFLKSLNIKKVYIIGGEGAIS 86 (92)
T ss_pred EEEEC-C---CCCHHHHHHHHHcCCCEEEEECCCCccC
Confidence 55665 3 5889999999999999999999988774
No 110
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=29.94 E-value=7.4e+02 Score=26.82 Aligned_cols=159 Identities=20% Similarity=0.158 Sum_probs=85.5
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhh--cc-h
Q 016315 158 RCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILK--AG-G 232 (391)
Q Consensus 158 ~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~--vG-G 232 (391)
..-.++.|+.-|++..|. -||-.. ++..+||-.||+.=|+ -|+...-...-.+....+.+|.. .++. .| |
T Consensus 188 ~~~~~~~P~GVV~~I~Pw---N~P~~l~~~~i~pALaaGN~VVl--KPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~ 262 (538)
T PLN02466 188 HVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFG 262 (538)
T ss_pred eEEEEEecceEEEEECCC---chHHHHHHHHHhHHHHcCCEEEe--ECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCc
Confidence 445789999999999996 377544 5567899999997544 34321101111223334555552 2322 23 4
Q ss_pred HHHHHHHhhCCCCCCCceEEecCCcHHHH------HHH-HHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhh
Q 016315 233 AQAISAMAWGTESCPKVEKIFGPGNQYVT------AAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 305 (391)
Q Consensus 233 AQAIAAlAYGTetIpkVDkIvGPGN~YVt------~AK-r~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQ 305 (391)
...-.+|. +-|+||+|.==|..=|- +|+ .+- . |-. -+.|-+ -+|-|++||.+..|-+++.-
T Consensus 263 ~~~~~~L~----~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~-p----v~l-ElGGkn--p~iV~~dADl~~Aa~~i~~~ 330 (538)
T PLN02466 263 PTAGAALA----SHMDVDKLAFTGSTDTGKIVLELAAKSNLK-P----VTL-ELGGKS--PFIVCEDADVDKAVELAHFA 330 (538)
T ss_pred hhHHHHHh----cCCCcCEEEEECCHHHHHHHHHHHHhcCCC-c----EEE-EcCCCC--eEEEcCCCCHHHHHHHHHHH
Confidence 33333444 35889999888885443 221 110 0 111 122444 33445679999888776654
Q ss_pred hccCC----CCc-eEEEecCchHHHHHHHHHHHHHH
Q 016315 306 AEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQC 336 (391)
Q Consensus 306 AEHdp----~a~-aiLvT~s~~la~~~V~~ei~~ql 336 (391)
+=... .+. -++| .++++ ++..+.+.+..
T Consensus 331 ~f~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~ 363 (538)
T PLN02466 331 LFFNQGQCCCAGSRTFV--HERVY-DEFVEKAKARA 363 (538)
T ss_pred HHhhcCCCcCcCcEEEE--cHHHH-HHHHHHHHHHH
Confidence 42222 122 2444 34455 66666555433
No 111
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=29.31 E-value=6.9e+02 Score=26.21 Aligned_cols=165 Identities=16% Similarity=0.229 Sum_probs=88.9
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHH-HHHHH-cCCc-chhh-
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKK-AGVT-HILK- 229 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iL-aAA~l-aGv~-eIy~- 229 (391)
+|...-.++.|+.-|++..|. -|| ...+...+||-.||+.=|+- |+.. -......| .+.+. +|.. .++.
T Consensus 107 ~~~~~~~~~~P~Gvv~~I~P~---N~P~~~~~~~~~~AL~aGN~vvlK--ps~~-~~~~~~~l~~~~~~aag~P~g~~~~ 180 (455)
T cd07120 107 PGSFSLVLREPMGVAGIIVPW---NSPVVLLVRSLAPALAAGCTVVVK--PAGQ-TAQINAAIIRILAEIPSLPAGVVNL 180 (455)
T ss_pred CCceEEEEEecceeEEEECCC---chHHHHHHHHHHHHHHcCCEEEeE--CCCC-ChHHHHHHHHHHHHhcCCCccceEE
Confidence 354556788999999999996 366 44555788999999864443 4321 11222222 23333 4652 2332
Q ss_pred -cc-hHHHHHHHhhCCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHH
Q 016315 230 -AG-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 301 (391)
Q Consensus 230 -vG-GAQAIAAlAYGTetIpkVDkIvGPGN~Y------Vt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaD 301 (391)
.| |...-.+|. +=|.+|+|.=-|..= -.+|+++ . .+-.. +.|-+ -+|-+++||.+.+|-.
T Consensus 181 v~g~~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~aa~~~--~---~~~lE-lGG~~--~~IV~~daDl~~aa~~ 248 (455)
T cd07120 181 FTESGSEGAAHLV----ASPDVDVISFTGSTATGRAIMAAAAPTL--K---RLGLE-LGGKT--PCIVFDDADLDAALPK 248 (455)
T ss_pred EecCchhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcC--C---eEEEE-CCCCC--eeEECCCCCHHHHHHH
Confidence 22 444333332 347899985555442 2223321 0 02222 22444 3344557999998888
Q ss_pred HHhhhccCC----CCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 302 LLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 302 LLaQAEHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
++.-+=... .+...++. .++.. ++..+.+.+.++.+
T Consensus 249 i~~~~~~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~l 288 (455)
T cd07120 249 LERALTIFAGQFCMAGSRVLV-QRSIA-DEVRDRLAARLAAV 288 (455)
T ss_pred HHHHHHHhCCCCCCCCeEEEE-cHHHH-HHHHHHHHHHHHhc
Confidence 765443322 23333333 44455 66777676666655
No 112
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=28.88 E-value=6.9e+02 Score=26.11 Aligned_cols=164 Identities=20% Similarity=0.206 Sum_probs=82.9
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhccceeecCCCeEEEEcCCCCCCCCCHHHHH-HHHHcCCcchhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY-CAKKAGVTHILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypSTv-LM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLa-AA~laGv~eIy~v--G 231 (391)
|.....++.|+.-|++..|.- ||-.. +...+||-.||..=|+ =|+. ........|+ ..+.+==..++.+ |
T Consensus 129 ~~~~~~~r~P~GVv~~I~p~N---~P~~~~~~~i~~ALaaGN~VIl--Kps~-~~p~~~~~l~~~~~~alP~gv~~~v~g 202 (475)
T PRK13473 129 GHTSMIRRDPVGVVASIAPWN---YPLMMAAWKLAPALAAGNTVVL--KPSE-ITPLTALKLAELAADILPPGVLNVVTG 202 (475)
T ss_pred CceeEEEEecceeEEEEccCC---hHHHHHHHHHHHHHhcCCEEEE--ECCC-CChHHHHHHHHHHHHhCCcCcEEEEec
Confidence 444556789999999999964 66544 4567899999986443 3432 1111111111 1111101122221 3
Q ss_pred -hHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 232 -GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 232 -GAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
|...-.+|. +-|.+|+|.=-|..=+ .+|+.+- .+...+ .|-+= +|-|++||.+..|-.++.
T Consensus 203 ~~~~~~~~l~----~~~~vd~V~fTGs~~~g~~i~~~aa~~~~-----~~~lEl-gG~~p--~iV~~dADld~Aa~~i~~ 270 (475)
T PRK13473 203 RGATVGDALV----GHPKVRMVSLTGSIATGKHVLSAAADSVK-----RTHLEL-GGKAP--VIVFDDADLDAVVEGIRT 270 (475)
T ss_pred CchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcCC-----cEEEEC-CCCCe--eEECCCCCHHHHHHHHHH
Confidence 444444442 3578999884443322 1222110 022222 24442 344667999988777752
Q ss_pred ----hhccCCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 ----QAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 ----QAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-+=+.-.+...++. .++.. ++..+.+.+.++.+
T Consensus 271 ~~f~n~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~l 307 (475)
T PRK13473 271 FGYYNAGQDCTAACRIYA-QRGIY-DDLVAKLAAAVATL 307 (475)
T ss_pred HHHhcCCCCCCCCeEEEE-cHHHH-HHHHHHHHHHHHhC
Confidence 22223333333333 33455 66666666666554
No 113
>PF09824 ArsR: ArsR transcriptional regulator; InterPro: IPR014517 Members of this family of archaeal proteins are conserved transcriptional regulators belonging to the ArsR family.
Probab=28.31 E-value=75 Score=29.80 Aligned_cols=46 Identities=13% Similarity=0.235 Sum_probs=37.0
Q ss_pred CHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCC
Q 016315 58 THAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDK 104 (391)
Q Consensus 58 ~~~~~~~~l~R~~~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~ 104 (391)
+..++..++.=....++++++.|..|.+.|+. |...+-+.+++|.-
T Consensus 88 s~~DLsdii~i~f~~deel~~~~e~i~~~v~~-Gn~Sl~~lsr~l~~ 133 (160)
T PF09824_consen 88 SMEDLSDIIYIAFMSDEELRDYVEKIEKEVEA-GNTSLSDLSRKLGI 133 (160)
T ss_pred eHHHHHHHHheeecCHHHHHHHHHHHHHHHHc-CCCcHHHHHHHhCC
Confidence 34556665554445678999999999999999 99999999999883
No 114
>PRK11678 putative chaperone; Provisional
Probab=27.74 E-value=1.6e+02 Score=31.22 Aligned_cols=48 Identities=17% Similarity=0.193 Sum_probs=33.8
Q ss_pred CCeEEEEcCCCCCCC----CCH----HHHHHHHHcCCcchhhcchHHHHHHHhhCCC
Q 016315 196 CKTVVLATPPSQDGS----ICK----EVLYCAKKAGVTHILKAGGAQAISAMAWGTE 244 (391)
Q Consensus 196 V~~Ivv~TPP~~~G~----i~p----~iLaAA~laGv~eIy~vGGAQAIAAlAYGTe 244 (391)
|+++|+.-|..-+|. -+. .+..||.++|.+.+.-+=-..| ||++||..
T Consensus 149 v~~~VItvPa~F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtA-AAl~y~~~ 204 (450)
T PRK11678 149 ITQAVIGRPVNFQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVA-AGLDFEAT 204 (450)
T ss_pred CCcEEEEECCccccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHH-HHHHhccc
Confidence 577788778753321 111 1578999999999888877766 78899963
No 115
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=27.25 E-value=7.3e+02 Score=25.83 Aligned_cols=166 Identities=18% Similarity=0.175 Sum_probs=92.3
Q ss_pred EEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-----chhhc---ch
Q 016315 161 RVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-----HILKA---GG 232 (391)
Q Consensus 161 qr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-----eIy~v---GG 232 (391)
-++.|...|+...| |.+|. ..++..++|-.+|.. +++=|+..+-...-.++.+...++-+ .+.-+ ||
T Consensus 108 ~~~~P~Gvv~~I~p-~N~P~--l~~~s~~~aLlaGN~--~ilKpS~~~p~~~~~l~~~l~~~~p~~~~~~~~~vv~~~g~ 182 (422)
T cd07080 108 IRAQPRGLVVHIIA-GNVPL--LPVWSIVRGLLVKNV--NLLKMSSSDPLTATALLRSLADVDPNHPLTDSISVVYWPGG 182 (422)
T ss_pred eEEcCCceEEEEcc-CCccc--cHHHHHHHHHHhcCc--eEEECCCccchHHHHHHHHHHhcCCCCcccceEEEEEecCC
Confidence 46789999999888 45555 578888999999985 44556644322222334444444443 22222 54
Q ss_pred HHHHHHHhhCCCCCCCceEEecCCcHHHHHHHH-HhcCCCCcccccCCCCCcEEEEEecCCC----CHHH----HHHHHH
Q 016315 233 AQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNSEAMISIDMPAGPSEVLVIADIYA----SPVH----IAADLL 303 (391)
Q Consensus 233 AQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr-~v~~~~g~VgID~~AGPSEvlVIAD~tA----nP~~----VAaDLL 303 (391)
...++..-+. -+ |+|+-=|+--+...=+ .... + . ...-=||-=-.+|-|+.+ |.+. +|.|.+
T Consensus 183 ~~~~~~~l~~---~~--D~i~~~Gs~~~~~~i~~~a~~-~--~-~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~ 253 (422)
T cd07080 183 DAELEERILA---SA--DAVVAWGGEEAVKAIRSLLPP-G--C-RLIDFGPKYSFAVIDREALESEKLAEVADALAEDIC 253 (422)
T ss_pred chHHHHHHHH---hC--CEEEEeCCHHHHHHHHHhCCC-C--C-eeeecCCceeEEEecHHhhccccHHHHHHHHHHHHH
Confidence 4444443321 12 8888877766554422 2222 1 1 244567764445555555 5443 445555
Q ss_pred hhhccCCCC-ceEEEecCc-----hHHHHHHHHHHHHHHhcCCc
Q 016315 304 SQAEHGPDS-QVVLVIVGD-----GVDLDAIEQEISKQCQSLPR 341 (391)
Q Consensus 304 aQAEHdp~a-~aiLvT~s~-----~la~~~V~~ei~~ql~~lpr 341 (391)
.-+=..-.| +.++|-.+. +++ +++.+++++..+..|+
T Consensus 254 ~~~gQ~C~sp~~v~V~~~~~~~~~~f~-~~l~~~l~~~~~~~p~ 296 (422)
T cd07080 254 RYDQQACSSPQVVFVEKDDDEELREFA-EALAAALERLPRRYPA 296 (422)
T ss_pred HHhhhhccCCeEEEEECCCCchHHHHH-HHHHHHHHHHHHhCCC
Confidence 544443333 456665554 455 7777777766666664
No 116
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=27.25 E-value=7.8e+02 Score=26.22 Aligned_cols=170 Identities=16% Similarity=0.176 Sum_probs=89.8
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchH-hhhhccceeecCCCeEEEEcCCCCCCCCCHH-HHHHHHHcCCc-chhhc-
Q 016315 155 KGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA- 230 (391)
Q Consensus 155 ~Gv~~Gqr~~PierVGlYVPGG~a~ypST-vLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~-iLaAA~laGv~-eIy~v- 230 (391)
+|.....++.|+.-|++..|. -||=. .+...+||-.||+.=| +-|+... ..... +..+...+|+. .++.+
T Consensus 161 ~g~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~i~~ALaaGN~VV--lKPs~~t-p~~a~~l~~~l~~aGlP~gvv~vv 234 (514)
T PRK03137 161 PGEHNRYFYIPLGVGVVISPW---NFPFAIMAGMTLAAIVAGNTVL--LKPASDT-PVIAAKFVEVLEEAGLPAGVVNFV 234 (514)
T ss_pred CCceEEEEEecCcEEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EECCCCC-cHHHHHHHHHHHHhCCCCCcEEEe
Confidence 454556688999999999995 47744 4557889999998644 3344221 12222 33445566764 33332
Q ss_pred -c-hHHHHHHHhhCCCCCCCceEEecCCcHHHH--HHHHHhcCC----CC-cccccCCCCCcEEEEEecCCCCHHHHHHH
Q 016315 231 -G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT--AAKMILQNS----EA-MISIDMPAGPSEVLVIADIYASPVHIAAD 301 (391)
Q Consensus 231 -G-GAQAIAAlAYGTetIpkVDkIvGPGN~YVt--~AKr~v~~~----~g-~VgID~~AGPSEvlVIAD~tAnP~~VAaD 301 (391)
| |...-.+|. .-|+||+|.==|..-|- .++..-... +. .| +=-+.|-+=++ -+++||.+..|-.
T Consensus 235 ~g~~~~~~~~L~----~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v-~lElgGk~~~i--V~~daDl~~Aa~~ 307 (514)
T PRK03137 235 PGSGSEVGDYLV----DHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRV-IAEMGGKDAIV--VDEDADLDLAAES 307 (514)
T ss_pred ecCchHHHHHHh----cCCCcCEEEEECCcHHHHHHHHHHhcccccccccceE-EecCCCCCeEE--ECCCCCHHHHHHH
Confidence 3 444434444 35889998444443322 111111000 00 01 00122434333 3567899988877
Q ss_pred HHhhhccCC----CCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 302 LLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 302 LLaQAEHdp----~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
++.-+=+.. .|...++. .++.. +++.+.+.+.++.+
T Consensus 308 i~~~~~~~~GQ~C~a~~rv~V-~~~v~-d~f~~~l~~~~~~l 347 (514)
T PRK03137 308 IVASAFGFSGQKCSACSRAIV-HEDVY-DEVLEKVVELTKEL 347 (514)
T ss_pred HHHHHHhCCCCCCccCeEEEE-eHHHH-HHHHHHHHHHHHhC
Confidence 765443332 23233333 44455 77777777666654
No 117
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=27.16 E-value=1.4e+02 Score=29.41 Aligned_cols=71 Identities=24% Similarity=0.274 Sum_probs=44.5
Q ss_pred eEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCccccc
Q 016315 198 TVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISID 277 (391)
Q Consensus 198 ~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID 277 (391)
++|++.|+.-+..---.+..++..+|++.++-+=-+-| ||++||... + .| .+ .+-+|
T Consensus 100 ~~vitvP~~~~~~~r~~~~~~~~~ag~~~~~li~ep~a-aa~~~g~~~----~---~~-----------~~----~lVvD 156 (333)
T TIGR00904 100 RIVICVPSGITPVERRAVKESALSAGAREVYLIEEPMA-AAIGAGLPV----E---EP-----------TG----SMVVD 156 (333)
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCCeEEEecCHHH-HHHhcCCcc----c---CC-----------ce----EEEEE
Confidence 45566665422222335777888999998888855533 567788631 1 01 11 25578
Q ss_pred CCCCCcEEEEEecC
Q 016315 278 MPAGPSEVLVIADI 291 (391)
Q Consensus 278 ~~AGPSEvlVIAD~ 291 (391)
+=+|-+++.++..+
T Consensus 157 iG~gttdvs~v~~~ 170 (333)
T TIGR00904 157 IGGGTTEVAVISLG 170 (333)
T ss_pred cCCCeEEEEEEEeC
Confidence 88999999999544
No 118
>PF07788 DUF1626: Protein of unknown function (DUF1626); InterPro: IPR012431 This is a family consisting of sequences from hypothetical proteins of unknown function expressed by certain species of archaea. One member (Q9YCN7 from SWISSPROT) is thought to be similar to tropomyosin [].
Probab=26.72 E-value=66 Score=26.21 Aligned_cols=29 Identities=24% Similarity=0.395 Sum_probs=24.2
Q ss_pred eecCCC--eEEEEcCCCCCCCCCHHHHHHHHHcCCc
Q 016315 192 QIAGCK--TVVLATPPSQDGSICKEVLYCAKKAGVT 225 (391)
Q Consensus 192 kVAGV~--~Ivv~TPP~~~G~i~p~iLaAA~laGv~ 225 (391)
|+-|++ +++++||= +++..+..|..+|++
T Consensus 40 k~~grk~~r~ivVtp~-----id~~a~~~A~~LGIe 70 (70)
T PF07788_consen 40 KVHGRKVDRLIVVTPY-----IDDRAKEMAEELGIE 70 (70)
T ss_pred HHHCCCcceEEEEEee-----cCHHHHHHHHHhCCC
Confidence 456776 99999985 888999999999984
No 119
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=26.29 E-value=7.8e+02 Score=25.86 Aligned_cols=156 Identities=18% Similarity=0.182 Sum_probs=83.3
Q ss_pred EEEEEecceeeEeecCCCCCCc-hHhhhhccceeecCCCeEEEEcCCCCCCCCCHHH---HH-----HHHHcCCc-chhh
Q 016315 160 KRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LY-----CAKKAGVT-HILK 229 (391)
Q Consensus 160 Gqr~~PierVGlYVPGG~a~yp-STvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~i---La-----AA~laGv~-eIy~ 229 (391)
-.++.|+.-|++..|. -|| .+.+...+||-.+|+.=| +-|+. ..|.+ |+ +...+|+. .++.
T Consensus 127 ~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~ALaaGN~Vv--lKps~----~~p~~~~~l~~l~~~~~~~aglP~gv~~ 197 (474)
T cd07130 127 MEQWNPLGVVGVITAF---NFPVAVWGWNAAIALVCGNVVV--WKPSP----TTPLTAIAVTKIVARVLEKNGLPGAIAS 197 (474)
T ss_pred EEEEecceeEEEEccC---CCHHHHHHHHhhHHHHcCCeEE--eeCCc----cCHHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 3567999999999995 366 344557789999998644 33432 22322 11 23456653 2222
Q ss_pred -c-chHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHH
Q 016315 230 -A-GGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 301 (391)
Q Consensus 230 -v-GGAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaD 301 (391)
+ |+...-.+|. .=|.||+|.=-|..=+ .+|+++ .. +... +-|-+=++| +++||.+..|-.
T Consensus 198 ~v~g~~~~~~~L~----~~~~vd~V~fTGs~~~g~~i~~~aa~~~-~~----~~lE-lGGk~p~iV--~~dadl~~Aa~~ 265 (474)
T cd07130 198 LVCGGADVGEALV----KDPRVPLVSFTGSTAVGRQVGQAVAARF-GR----SLLE-LGGNNAIIV--MEDADLDLAVRA 265 (474)
T ss_pred EEeCChhHHHHHh----cCCCCCEEEEECchHHHHHHHHHHHhcC-CC----EEEE-cCCCCeEEE--CCCCCHHHHHHH
Confidence 2 5544323333 2488999984444322 122222 11 4444 336665554 445899887766
Q ss_pred HHhhhccC----CCCc-eEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 302 LLSQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 302 LLaQAEHd----p~a~-aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
++.-+=.. -.|. -++| .+++. ++..+.+.+.++.+
T Consensus 266 i~~~~~~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~l 305 (474)
T cd07130 266 VLFAAVGTAGQRCTTTRRLIV--HESIY-DEVLERLKKAYKQV 305 (474)
T ss_pred HHHHHHhcCCCCCcCCeEEEE--cHhHH-HHHHHHHHHHHhcC
Confidence 65433221 1222 3444 33355 66666666666554
No 120
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=26.22 E-value=1.6e+02 Score=28.71 Aligned_cols=56 Identities=25% Similarity=0.247 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCC
Q 016315 214 EVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIY 292 (391)
Q Consensus 214 ~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~t 292 (391)
.+..++..+|+..+|-+=-.-| ||++||...-. ..+. +-+|+=+|=|++.++.++.
T Consensus 118 ~~~~~~e~~g~~~~~lv~ep~A-Aa~a~g~~~~~------------------~~~~----lVvDiG~gttdvs~v~~g~ 173 (335)
T PRK13930 118 AVREAAEHAGAREVYLIEEPMA-AAIGAGLPVTE------------------PVGN----MVVDIGGGTTEVAVISLGG 173 (335)
T ss_pred HHHHHHHHcCCCeEEecccHHH-HHHhcCCCcCC------------------CCce----EEEEeCCCeEEEEEEEeCC
Confidence 5666788888888888743322 45677764210 0111 5578888888888887754
No 121
>PF04895 DUF651: Archaeal protein of unknown function (DUF651); InterPro: IPR006979 This conserved region is found in the C-terminal region of a number of conserved archaeal proteins of unknown function.
Probab=25.43 E-value=29 Score=30.46 Aligned_cols=43 Identities=19% Similarity=0.031 Sum_probs=31.3
Q ss_pred HHHHHHHhhCCeEEEECCHHHHHhccchhhhccccccccccceE
Q 016315 342 GEFASKALGHSFMVFARDMLEVSQEFPSFVLSNLDEVDQQSSML 385 (391)
Q Consensus 342 ~~ia~~sl~~g~iivv~sleeAi~~an~~~~~~l~~~~~~~~~~ 385 (391)
++-+++|+++.- ..++|++||++.+++.+.....+.-.+|.+|
T Consensus 56 RE~vR~A~~~~p-~~f~~l~eAl~~~~~~l~~~~~~w~~~s~ll 98 (110)
T PF04895_consen 56 RENVRKAMKGKP-EKFETLEEALEYVSSRLKLPIKEWLRKSKLL 98 (110)
T ss_pred HHHHHHHHhCCC-cccCCHHHHHHHHHHHhCCCHHHHHHHhHHH
Confidence 345566666333 5679999999999999887777776666554
No 122
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=24.87 E-value=99 Score=26.49 Aligned_cols=33 Identities=27% Similarity=0.201 Sum_probs=27.2
Q ss_pred HHHHHHHHhhhccCCCCceEEEecCchHHHHHHH
Q 016315 296 VHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIE 329 (391)
Q Consensus 296 ~~VAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~ 329 (391)
..++.|++.+|.+..-...+|+|-|.+++ ..++
T Consensus 85 ~~l~~d~~~~~~~~~~d~ivLvSgD~Df~-~~i~ 117 (149)
T cd06167 85 VALAIDALELAYKRRIDTIVLVSGDSDFV-PLVE 117 (149)
T ss_pred HHHHHHHHHHhhhcCCCEEEEEECCccHH-HHHH
Confidence 45899999999998777899999999987 4433
No 123
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=24.45 E-value=8.2e+02 Score=25.50 Aligned_cols=161 Identities=16% Similarity=0.190 Sum_probs=86.2
Q ss_pred EEEEEEecceeeEeecCCCCCCchHhh-hhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c-hH
Q 016315 159 CKRVARSIGSVGLYVPGGTAVLPSTAL-MLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G-GA 233 (391)
Q Consensus 159 ~Gqr~~PierVGlYVPGG~a~ypSTvL-M~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G-GA 233 (391)
.-.++.|+.-|++..|.- ||-... ...+||-.+|+.=|+- |+...-...-.+..+...+|.. .++.+ | |.
T Consensus 127 ~~~~~~P~Gvv~~I~p~N---~P~~~~~~~~~~ALaaGN~VvlK--ps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~ 201 (467)
T TIGR01804 127 SYTIREPLGVCVGIGAWN---YPLQIASWKIAPALAAGNAMVFK--PSEITPLTALKVAELMEEAGLPDGVFNVVLGKGA 201 (467)
T ss_pred EEEEEeeeeEEEEECCCc---hHHHHHHHHHHHHHhcCCEEEee--CCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcH
Confidence 457789999999999964 665544 4568999999865443 3321111111233344555553 33222 3 34
Q ss_pred HHHHHHhhCCCCCCCceEEecCCcHH----HH--HHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhc
Q 016315 234 QAISAMAWGTESCPKVEKIFGPGNQY----VT--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAE 307 (391)
Q Consensus 234 QAIAAlAYGTetIpkVDkIvGPGN~Y----Vt--~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAE 307 (391)
..-.+|. .-|.||+|.==|..= |. +|+++ . .+-..+- |.+=++| |++||.+..|..++.-+=
T Consensus 202 ~~~~~L~----~~~~v~~V~fTGs~~~g~~v~~~a~~~l-~----~~~lElG-G~~~~iV--~~dADl~~Aa~~i~~~~~ 269 (467)
T TIGR01804 202 EVGEPLV----NHKDVAKVSFTGGVPTGKKIMAAAADHL-K----HVTMELG-GKSPLIV--FDDADLELAVDQAMNGNF 269 (467)
T ss_pred HHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhcC-C----cEEEecC-CCCeeEE--CCCCCHHHHHHHHHHHHH
Confidence 3333332 357899995555522 22 22221 1 1334422 6554444 567899887776654432
Q ss_pred cCC----CC-ceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 308 HGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 308 Hdp----~a-~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
... .+ +-++| . ++.+ ++..+.+.+.++.+
T Consensus 270 ~~~GQ~C~a~~rv~V-~-~~i~-d~f~~~l~~~~~~~ 303 (467)
T TIGR01804 270 FSAGQVCSNGTRVFV-H-NKIK-EKFEARLVERTKRI 303 (467)
T ss_pred HhcCCCCCCCCEEEE-c-HHHH-HHHHHHHHHHHHhC
Confidence 222 12 23444 3 4455 66777776666554
No 124
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=23.10 E-value=8.4e+02 Score=25.15 Aligned_cols=169 Identities=18% Similarity=0.165 Sum_probs=95.3
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc-chhhc--c
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILKA--G 231 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~-eIy~v--G 231 (391)
|...-.++.|+.-|++..|.- +|- ..++..+||-.+|+.=|+- |+...-...-.+..+...+|.. .++.+ |
T Consensus 110 ~~~~~~~~~P~Gvv~~I~p~N---~P~~~~~~~l~~ALaaGN~vilK--ps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g 184 (453)
T cd07099 110 NKKATVEYRPYGVVGVISPWN---YPLLTPMGDIIPALAAGNAVVLK--PSEVTPLVGELLAEAWAAAGPPQGVLQVVTG 184 (453)
T ss_pred CceeEEEEecceEEEEECCCC---hHHHHHHHHHHHHHHcCCEEEEE--CCccchHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence 445567889999999999953 664 4466789999999975543 4322111122344555677775 65544 3
Q ss_pred hHHHHHHHhhCCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhcc--
Q 016315 232 GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH-- 308 (391)
Q Consensus 232 GAQAIAAlAYGTetIpkVDkIvGPGN~YVt~A-Kr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEH-- 308 (391)
+...-.+|. + .+||+|.==|+.-|-.+ .+......-.|...+ .|-+= +|-|++||.+..+-.++.-+=.
T Consensus 185 ~~~~~~~l~---~--~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lel-gG~~p--~iV~~dadl~~a~~~i~~~~~~~~ 256 (453)
T cd07099 185 DGATGAALI---D--AGVDKVAFTGSVATGRKVMAAAAERLIPVVLEL-GGKDP--MIVLADADLERAAAAAVWGAMVNA 256 (453)
T ss_pred CchHHHHHh---c--CCCCEEEEECCHHHHHHHHHHHHhcCCeEEEEC-CCCCe--EEECCCCCHHHHHHHHHHHHHhcC
Confidence 233333333 2 25999998898776332 111110000132232 36553 4445569999888777743332
Q ss_pred --CCCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 309 --GPDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 309 --dp~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
.-.+...++. .++.. +++.+.+.+.++.+
T Consensus 257 GQ~C~a~~ri~V-~~~i~-d~f~~~l~~~~~~l 287 (453)
T cd07099 257 GQTCISVERVYV-HESVY-DEFVARLVAKARAL 287 (453)
T ss_pred CCCCCCCcEEEE-cHHHH-HHHHHHHHHHHHhc
Confidence 2223333333 34455 77777777776655
No 125
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=22.98 E-value=9e+02 Score=25.45 Aligned_cols=164 Identities=15% Similarity=0.144 Sum_probs=85.4
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhccceeecCCCeEEEEcCCCCCCCCCHHHHHHHHHcCCc----chhhc
Q 016315 156 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT----HILKA 230 (391)
Q Consensus 156 Gv~~Gqr~~PierVGlYVPGG~a~ypS-TvLM~aIPAkVAGV~~Ivv~TPP~~~G~i~p~iLaAA~laGv~----eIy~v 230 (391)
|...-.++.|+.-|++..|. -||- +.+...+||-.||+.=| +-|+...-...-.+..+.+.+|.. .+..
T Consensus 133 ~~~~~~~~~PlGVv~~I~p~---N~P~~~~~~~~~~ALaaGN~Vv--~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~- 206 (488)
T PRK13252 133 GSFVYTRREPLGVCAGIGAW---NYPIQIACWKSAPALAAGNAMI--FKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQ- 206 (488)
T ss_pred CceEEEEEeeeeEEEEECCC---chHHHHHHHHHHHHHhcCCeEE--EeCCccCcHHHHHHHHHHHHcCcCcccEEEEe-
Confidence 44445677999999999986 4774 45556789999998644 445422111112233344556553 2322
Q ss_pred chHHHHHHHhhCCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 231 GGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 231 GGAQAIAAlAYGTetIpkVDkIvGPGN~YV------t~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
|+...-.+|. +-|.||+|.=-|..-+ .+|+.+. . |... +-|-+= +|-|++||.+..+-.++.
T Consensus 207 g~~~~~~~L~----~~~~vd~V~fTGS~~~g~~i~~~aa~~l~-~----~~lE-lgG~~p--~iV~~dAdl~~A~~~i~~ 274 (488)
T PRK13252 207 GDGRVGAWLT----EHPDIAKVSFTGGVPTGKKVMAAAAASLK-E----VTME-LGGKSP--LIVFDDADLDRAADIAML 274 (488)
T ss_pred cCcHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcCC-c----EEEE-cCCCCe--eEECCCCCHHHHHHHHHH
Confidence 3233323333 3578999985554333 2222210 0 1111 224443 344567999998777662
Q ss_pred -hhccC---CCCceEEEecCchHHHHHHHHHHHHHHhcC
Q 016315 305 -QAEHG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSL 339 (391)
Q Consensus 305 -QAEHd---p~a~aiLvT~s~~la~~~V~~ei~~ql~~l 339 (391)
-..+. -.+...++.. ++.. +++.+.+.+.++.+
T Consensus 275 ~~~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~ 311 (488)
T PRK13252 275 ANFYSSGQVCTNGTRVFVQ-KSIK-AAFEARLLERVERI 311 (488)
T ss_pred HHHhhcCCCCCCCeEEEEc-HHHH-HHHHHHHHHHHHhc
Confidence 22221 1222233333 3454 66666666665554
No 126
>PF10792 DUF2605: Protein of unknown function (DUF2605); InterPro: IPR019728 This entry represents a protein conserved in Cyanobacteria. The function is not known.
Probab=22.65 E-value=44 Score=28.98 Aligned_cols=20 Identities=25% Similarity=0.542 Sum_probs=13.3
Q ss_pred HHHHHHHHhcCCCCcccccC
Q 016315 259 YVTAAKMILQNSEAMISIDM 278 (391)
Q Consensus 259 YVt~AKr~v~~~~g~VgID~ 278 (391)
=|++||.+|.-++|.|||||
T Consensus 56 ev~aa~~Lf~At~~q~gv~m 75 (98)
T PF10792_consen 56 EVNAARALFQATDGQVGVEM 75 (98)
T ss_pred HHHHHHHHHHhcCccccccH
Confidence 36777777744445688876
No 127
>cd00105 KH-I K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that belong to different protein folds, but they share a single KH motif. The KH motif is folded into a beta alpha alpha beta unit. In addition to the core, type II KH domains (e.g. ribosomal protein S3) include N-terminal extension and type I KH domains (e.g. hnRNP K) contain C-terminal extension.
Probab=22.55 E-value=1.9e+02 Score=21.01 Aligned_cols=29 Identities=21% Similarity=0.365 Sum_probs=22.2
Q ss_pred CCceEEecCCcHHHHHHHHHhcCCCCcccccCCC
Q 016315 247 PKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPA 280 (391)
Q Consensus 247 pkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~A 280 (391)
..+.+|.|||...+..-++..+ |.|++..
T Consensus 9 ~~~~~vIG~~G~~i~~I~~~s~-----~~I~i~~ 37 (64)
T cd00105 9 SLVGRIIGKGGSTIKEIREETG-----AKIKIPD 37 (64)
T ss_pred hhcceeECCCCHHHHHHHHHHC-----CEEEEcC
Confidence 3477899999999999888775 4555554
No 128
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=22.51 E-value=7e+02 Score=23.99 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=38.4
Q ss_pred CCCCCHHHHHHHHHcCCcchhh-cch-HHHHHHHhhCCCCCCCceEEecCCcHHHHHHHH
Q 016315 208 DGSICKEVLYCAKKAGVTHILK-AGG-AQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM 265 (391)
Q Consensus 208 ~G~i~p~iLaAA~laGv~eIy~-vGG-AQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr 265 (391)
+|.+...--.+|++.|+++.+- ++| -+|+-++..+. +.+=|+|+-|-|.|-.....
T Consensus 58 ~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al--~~~gd~Vlv~~~~h~s~~~~ 115 (294)
T cd00615 58 TGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAV--CGPGDKILIDRNCHKSVING 115 (294)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHc--CCCCCEEEEeCCchHHHHHH
Confidence 3445555566788999977664 544 57777776665 46779999998888665444
No 129
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=22.51 E-value=2.8e+02 Score=24.74 Aligned_cols=69 Identities=22% Similarity=0.241 Sum_probs=36.5
Q ss_pred HHHHHhhhccCCCCceEEEecC-chHHHHHHHHHHHHHH------------------------hcCC-cHHHHHHHhhCC
Q 016315 299 AADLLSQAEHGPDSQVVLVIVG-DGVDLDAIEQEISKQC------------------------QSLP-RGEFASKALGHS 352 (391)
Q Consensus 299 AaDLLaQAEHdp~a~aiLvT~s-~~la~~~V~~ei~~ql------------------------~~lp-r~~ia~~sl~~g 352 (391)
.+|+|.-.++||+.++|++--. -.-. ++..+.+.+-- ..+. ..++...++++.
T Consensus 42 ~~d~l~~~~~D~~t~~I~ly~E~~~d~-~~f~~~~~~a~~~KPVv~lk~Grt~~g~~aa~sHTgslag~~~~~~a~~~~a 120 (138)
T PF13607_consen 42 FADLLEYLAEDPDTRVIVLYLEGIGDG-RRFLEAARRAARRKPVVVLKAGRTEAGARAAASHTGSLAGDDAVYDAALRQA 120 (138)
T ss_dssp HHHHHHHHCT-SS--EEEEEES--S-H-HHHHHHHHHHCCCS-EEEEE---------------------HHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCEEEEEccCCCCH-HHHHHHHHHHhcCCCEEEEeCCCchhhhhhhhccCCcccCcHHHHHHHHHHc
Confidence 6788888888888888777322 1111 22222222111 1111 124555666777
Q ss_pred eEEEECCHHHHHhccc
Q 016315 353 FMVFARDMLEVSQEFP 368 (391)
Q Consensus 353 ~iivv~sleeAi~~an 368 (391)
.++.++|+||.++.+.
T Consensus 121 Gv~~v~~~~el~~~~~ 136 (138)
T PF13607_consen 121 GVVRVDDLDELLDAAK 136 (138)
T ss_dssp TEEEESSHHHHHHHHC
T ss_pred CceEECCHHHHHHHHH
Confidence 8888999999988653
No 130
>PF07126 DUF1379: Protein of unknown function (DUF1379); InterPro: IPR009809 This family consists of several hypothetical bacterial proteins of around 180 residues in length. The function of this family is unknown.
Probab=22.42 E-value=88 Score=28.86 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=22.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhccCCCceEEecCc
Q 016315 122 LDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKG 156 (391)
Q Consensus 122 l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~~~~~G 156 (391)
++++.+.=|-.=+---.+||+.++|++|......+
T Consensus 49 ls~~~~~elaLnA~Aa~rF~KP~mPKSWfF~~~~~ 83 (153)
T PF07126_consen 49 LSDAQRAELALNAVAAKRFLKPQMPKSWFFDTQSG 83 (153)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCCC
Confidence 44444443333333445899999999998776544
No 131
>PRK15364 pathogenicity island 2 effector protein SseB; Provisional
Probab=22.02 E-value=2e+02 Score=27.72 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=44.9
Q ss_pred ChhhHHHHHHHHHHHHHHhhHH-------HHHHHHHHhCCCCCCceeeCCCCCCC--------CCCCHHHHHHHHHHHHH
Q 016315 72 DFSSIFSMVHPIVDDVRNRGDA-------SVKDYTERFDKVKLEKVVENVSELPD--------PELDAAVKEAFDVAYNN 136 (391)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~-------AL~~yt~kFD~~~~~~l~Vs~~ei~~--------A~l~~~~~~Ai~~A~~n 136 (391)
+..+....|.++|.+|.+.+|+ .|.+|-+. -| +.|+.-.++. ..++.--++|++-|.++
T Consensus 73 ~aQ~mAN~VDevIA~v~k~ddK~k~~LPddVI~Ymrd-Ng-----I~VdG~sid~Yl~k~~~~~~LdkG~LqAVKAALd~ 146 (196)
T PRK15364 73 NTQEKSNEMDEVIAKAAKGDAKTKEEVPEDVIKYMRD-NG-----ILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDN 146 (196)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccCCHHHHHHHHH-cC-----ceecccchHHHHhccCCccCCChhhHHHHHHHHHh
Confidence 4467788899999999999988 68899988 33 4444444421 26888889999988887
Q ss_pred H
Q 016315 137 I 137 (391)
Q Consensus 137 I 137 (391)
-
T Consensus 147 ~ 147 (196)
T PRK15364 147 D 147 (196)
T ss_pred h
Confidence 4
No 132
>KOG3022 consensus Predicted ATPase, nucleotide-binding [Cell cycle control, cell division, chromosome partitioning]
Probab=21.74 E-value=68 Score=32.75 Aligned_cols=81 Identities=21% Similarity=0.275 Sum_probs=47.0
Q ss_pred HHHhhCCCCCCCceEEecCCcHHHHHHHHHh-cCC---CCcccccCCCCCcEEEEEecCCCCHHHHHHHHHhhhccCCC-
Q 016315 237 SAMAWGTESCPKVEKIFGPGNQYVTAAKMIL-QNS---EAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPD- 311 (391)
Q Consensus 237 AAlAYGTetIpkVDkIvGPGN~YVt~AKr~v-~~~---~g~VgID~~AGPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~- 311 (391)
+.|..|--.=++=|-++.=|-.=-.+-|+++ ..+ -...-||||+|-|+.-+= =.++.+.
T Consensus 119 ~~mS~gfLl~~~~~~vIwRGpkk~~~I~qflk~vdwg~lDyLviDtPPGtsDehls----------------~~~~~~~~ 182 (300)
T KOG3022|consen 119 KLMSMGFLLKPRDDSVIWRGPKKNSMIKQFLKDVDWGELDYLVIDTPPGTSDEHLS----------------LVQFLRES 182 (300)
T ss_pred EEEEeeeecCCCCccceeechHHHHHHHHHHhcCCCCCcCEEEEeCCCCCChhhhh----------------eeeccccc
Confidence 3344443333334445544544444446643 111 123558999998865432 2333333
Q ss_pred CceEEEecCchHHHHHHHHHHH
Q 016315 312 SQVVLVIVGDGVDLDAIEQEIS 333 (391)
Q Consensus 312 a~aiLvT~s~~la~~~V~~ei~ 333 (391)
.-|++|||-.+.|+..|.+++.
T Consensus 183 ~gAviVTTPQ~vAl~Dv~K~i~ 204 (300)
T KOG3022|consen 183 DGAVIVTTPQEVALQDVRKEID 204 (300)
T ss_pred CceEEEeCchhhhhHHHHhhhh
Confidence 4489999999999888888876
No 133
>PF03433 EspA: EspA-like secreted protein ; InterPro: IPR005095 EspA is the prototypical member of this family. EspA, together with EspB, EspD and Tir are exported by a type III secretion system. These proteins are essential for attaching and effacing lesion formation. EspA is a structural protein and a major component of a large, transiently expressed, filamentous surface organelle which forms a direct link between the bacterium and the host cell [, ].; PDB: 1XOU_A.
Probab=21.14 E-value=32 Score=32.94 Aligned_cols=61 Identities=21% Similarity=0.293 Sum_probs=0.0
Q ss_pred ChhhHHHHHHHHHHHHHHhhHHH-------HHHHHHHhCCCCCCceeeCCCCCCC-------CCCCHHHHHHHHHHHHHH
Q 016315 72 DFSSIFSMVHPIVDDVRNRGDAS-------VKDYTERFDKVKLEKVVENVSELPD-------PELDAAVKEAFDVAYNNI 137 (391)
Q Consensus 72 ~~~~v~~~V~~Il~~Vr~~GD~A-------L~~yt~kFD~~~~~~l~Vs~~ei~~-------A~l~~~~~~Ai~~A~~nI 137 (391)
+..+....|.++|.++.+.||++ |.+|.++ ..+.|+...+.+ ..||..-++|++-|.++.
T Consensus 73 ~aQ~maN~vDevIA~~~k~~dk~k~~lp~dVi~Ym~~------ngI~VdG~si~~Yl~~n~~~~LdkG~LqaVKaAld~~ 146 (188)
T PF03433_consen 73 DAQDMANRVDEVIAEVAKSDDKAKAPLPDDVIDYMRD------NGIKVDGKSIDDYLKKNGSGGLDKGQLQAVKAALDNE 146 (188)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhccCCCccccccCCHHHHHHHHH------cCCeecCeeccchhhhhhhccCCchhHHHHHHHHHhh
Confidence 34566778999999999999998 6666665 235555555554 367777777777777765
Q ss_pred H
Q 016315 138 Y 138 (391)
Q Consensus 138 ~ 138 (391)
.
T Consensus 147 s 147 (188)
T PF03433_consen 147 S 147 (188)
T ss_dssp -
T ss_pred h
Confidence 3
No 134
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=20.47 E-value=1.7e+02 Score=32.91 Aligned_cols=155 Identities=8% Similarity=-0.004 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHhccCCCceE---EecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCC
Q 016315 130 FDVAYNNIYAFHLAQKSAETSV---ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 206 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~~~~~~~---~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~ 206 (391)
++.++++++.|.+...+..... ....+.....++.|+.-|++..|. . |+. + ++-++||-.||+. |++-|..
T Consensus 359 i~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw-N-P~~-~-~~~~~~ALaaGN~--vvlKpse 432 (715)
T TIGR01092 359 ISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFES-R-PDA-L-VQIASLAIRSGNG--LLLKGGK 432 (715)
T ss_pred HHHHHHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCC-C-hHH-H-HHHHHHHHHhCCE--EEEcCcc
Confidence 6678888888876322111011 112244456789999999999998 3 333 3 6789999999986 4444432
Q ss_pred CCCCCCHHH----HHHHHHc---CC-cchhhc--chHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHH-hcCCCCccc
Q 016315 207 QDGSICKEV----LYCAKKA---GV-THILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMI-LQNSEAMIS 275 (391)
Q Consensus 207 ~~G~i~p~i----LaAA~la---Gv-~eIy~v--GGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~-v~~~~g~Vg 275 (391)
..|.+ ....+.+ |+ +.++.+ |+...-..|. .-|+||+|+=-|+.=|-..=+. .+. -|.
T Consensus 433 ----~tp~t~~~l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~----~~~~vd~I~fTGS~~vG~~i~~~A~~---pv~ 501 (715)
T TIGR01092 433 ----EAARSNAILHKVITEAIPIHVGKKLIGLVTSREEIPDLLK----LDDVIDLVIPRGSNKLVSQIKKSTKI---PVL 501 (715)
T ss_pred ----cchHHHHHHHHHHHHHcCCCCCCcEEEEeCChHHHHHHHh----cCCCccEEEEcCCHHHHHHHHHhCCC---CEE
Confidence 23321 1111121 21 112221 5444333343 3578999988887654322110 111 011
Q ss_pred ccCCCCCcEEEEEecCCCCHHHHHHHHHh
Q 016315 276 IDMPAGPSEVLVIADIYASPVHIAADLLS 304 (391)
Q Consensus 276 ID~~AGPSEvlVIAD~tAnP~~VAaDLLa 304 (391)
. -+.|=+= +|-|++||.+..+.-++.
T Consensus 502 l-ElgGk~p--~iV~~dADl~~A~~~i~~ 527 (715)
T TIGR01092 502 G-HADGICH--VYVDKSASVDMAKRIVRD 527 (715)
T ss_pred E-EcCCcce--EEECCCCCHHHHHHHHHH
Confidence 0 1122222 444677898887644443
No 135
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=20.32 E-value=76 Score=35.43 Aligned_cols=73 Identities=18% Similarity=0.221 Sum_probs=49.4
Q ss_pred EEEEEecceeeEeecCCCCCCchHhhhhccceeecC--CCeEEEEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHH
Q 016315 160 KRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAG--CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAIS 237 (391)
Q Consensus 160 Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAG--V~~Ivv~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIA 237 (391)
...|.| +.+..-+ ..-|-..=-...| |+.+|+..|..-+-+---++-.||.++|. .++++===++-|
T Consensus 115 ~~~f~p-eeiss~~---------L~klke~Ae~~Lg~~v~~aviTVPa~F~~~Qr~at~~A~~iaGl-~vlrii~EPtAa 183 (620)
T KOG0101|consen 115 TKSFNP-EEISSMV---------LTKLKETAEAYLGKTVKKAVVTVPAYFNDSQRAATKDAALIAGL-NVLRIINEPTAA 183 (620)
T ss_pred ceeeee-eeeeehh---------ccccHHHHHHHhcCceeeEEEEecCCcCHHHHHHHHHHHHhcCC-ceeeeecchHHH
Confidence 456777 6654322 2223333333443 66788888876544455678889999999 788888888999
Q ss_pred HHhhCC
Q 016315 238 AMAWGT 243 (391)
Q Consensus 238 AlAYGT 243 (391)
|||||+
T Consensus 184 alAygl 189 (620)
T KOG0101|consen 184 ALAYGL 189 (620)
T ss_pred HHHhhc
Confidence 999995
No 136
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=20.17 E-value=2.3e+02 Score=22.23 Aligned_cols=69 Identities=29% Similarity=0.383 Sum_probs=42.7
Q ss_pred EecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEecCCCCHHHH---HHHHHhhhccCC------CCceEEEecCch
Q 016315 252 IFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI---AADLLSQAEHGP------DSQVVLVIVGDG 322 (391)
Q Consensus 252 IvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIAD~tAnP~~V---AaDLLaQAEHdp------~a~aiLvT~s~~ 322 (391)
|.|.||.=-+.++.+... ++ .|++|+++.+. +|+-. +..+-.++-++. .+..|++|....
T Consensus 4 iIG~G~mg~al~~~l~~~-----g~----~~~~v~~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~ 72 (96)
T PF03807_consen 4 IIGAGNMGSALARGLLAS-----GI----KPHEVIIVSSR--SPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQ 72 (96)
T ss_dssp EESTSHHHHHHHHHHHHT-----TS-----GGEEEEEEES--SHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GG
T ss_pred EECCCHHHHHHHHHHHHC-----CC----CceeEEeeccC--cHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHH
Confidence 459999999999998753 23 89999998755 44332 333322333311 255788888777
Q ss_pred HHHHHHHHHH
Q 016315 323 VDLDAIEQEI 332 (391)
Q Consensus 323 la~~~V~~ei 332 (391)
.. ..|..++
T Consensus 73 ~~-~~v~~~i 81 (96)
T PF03807_consen 73 QL-PEVLSEI 81 (96)
T ss_dssp GH-HHHHHHH
T ss_pred HH-HHHHHHH
Confidence 76 7777776
Done!