Query 016318
Match_columns 391
No_of_seqs 265 out of 2154
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 11:34:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016318.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016318hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 8.9E-35 3E-39 273.9 29.1 295 64-391 14-312 (322)
2 3sre_A PON1, serum paraoxonase 100.0 8.2E-29 2.8E-33 234.2 27.1 277 65-390 46-355 (355)
3 3dr2_A Exported gluconolactona 99.9 2.6E-24 9E-29 200.7 29.2 259 59-391 36-305 (305)
4 3e5z_A Putative gluconolactona 99.9 4.2E-23 1.4E-27 191.1 30.0 251 67-390 26-284 (296)
5 3g4e_A Regucalcin; six bladed 99.9 1.4E-22 4.7E-27 188.3 28.0 208 60-300 4-219 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 4.6E-22 1.6E-26 184.9 26.6 261 65-390 14-297 (314)
7 2p4o_A Hypothetical protein; p 99.9 1.6E-20 5.4E-25 175.2 29.1 187 69-302 32-234 (306)
8 2ghs_A AGR_C_1268P; regucalcin 99.9 1.8E-19 6.2E-24 169.6 30.1 203 59-300 39-250 (326)
9 1q7f_A NHL, brain tumor CG1071 99.9 2.5E-19 8.4E-24 164.6 30.2 244 65-390 26-278 (286)
10 2dg1_A DRP35, lactonase; beta 99.9 1.1E-19 3.7E-24 170.6 26.6 199 66-300 42-253 (333)
11 4hw6_A Hypothetical protein, I 99.8 3.3E-19 1.1E-23 174.3 26.7 242 66-391 136-432 (433)
12 1rwi_B Serine/threonine-protei 99.8 2.8E-19 9.4E-24 162.5 24.2 234 70-391 25-263 (270)
13 3hrp_A Uncharacterized protein 99.8 2.9E-18 1E-22 166.5 28.7 241 66-391 128-409 (409)
14 2qc5_A Streptogramin B lactona 99.8 1.2E-17 4.1E-22 153.4 31.2 185 66-300 17-208 (300)
15 3tc9_A Hypothetical hydrolase; 99.8 3E-18 1E-22 167.4 27.8 241 65-391 133-429 (430)
16 3fvz_A Peptidyl-glycine alpha- 99.8 1.9E-18 6.6E-23 162.6 24.0 251 67-390 22-320 (329)
17 2qc5_A Streptogramin B lactona 99.8 2.2E-17 7.6E-22 151.7 29.8 231 67-390 60-298 (300)
18 2z2n_A Virginiamycin B lyase; 99.8 1.6E-17 5.5E-22 152.5 28.5 231 68-390 56-293 (299)
19 2qe8_A Uncharacterized protein 99.8 5.9E-18 2E-22 160.3 25.4 202 69-302 17-270 (343)
20 2z2n_A Virginiamycin B lyase; 99.8 7.1E-17 2.4E-21 148.2 31.5 185 66-300 12-203 (299)
21 1npe_A Nidogen, entactin; glyc 99.8 2.5E-17 8.5E-22 150.2 23.5 189 68-301 35-229 (267)
22 3v64_C Agrin; beta propeller, 99.8 2.9E-17 9.8E-22 156.1 24.0 191 67-303 71-268 (349)
23 3v65_B Low-density lipoprotein 99.8 4.9E-17 1.7E-21 156.6 22.4 190 67-302 114-310 (386)
24 1ijq_A LDL receptor, low-densi 99.8 1.4E-16 4.9E-21 149.2 24.9 194 67-303 28-231 (316)
25 3v64_C Agrin; beta propeller, 99.7 1.1E-15 3.6E-20 145.3 28.5 147 130-300 72-224 (349)
26 3v65_B Low-density lipoprotein 99.7 2.5E-15 8.4E-20 144.7 28.4 147 130-300 115-267 (386)
27 1rwi_B Serine/threonine-protei 99.7 4.7E-16 1.6E-20 141.0 21.9 189 66-302 64-256 (270)
28 3kya_A Putative phosphatase; s 99.7 1.5E-15 5.2E-20 149.0 27.0 246 65-391 135-474 (496)
29 3sov_A LRP-6, low-density lipo 99.7 4.2E-16 1.4E-20 146.1 21.6 190 68-303 34-231 (318)
30 3dsm_A Uncharacterized protein 99.7 1.9E-15 6.6E-20 142.1 26.3 221 68-356 83-310 (328)
31 1npe_A Nidogen, entactin; glyc 99.7 3.7E-15 1.3E-19 135.7 26.5 146 131-300 36-188 (267)
32 4a0p_A LRP6, LRP-6, low-densit 99.7 6.5E-16 2.2E-20 157.5 23.1 192 66-303 34-230 (628)
33 3p5b_L Low density lipoprotein 99.7 1.7E-15 5.8E-20 146.6 23.7 194 67-303 110-313 (400)
34 3a9g_A Putative uncharacterize 99.7 3.5E-15 1.2E-19 141.9 25.3 179 60-262 21-227 (354)
35 4a2l_A BT_4663, two-component 99.7 3.9E-15 1.3E-19 156.4 28.0 235 71-389 359-611 (795)
36 1ijq_A LDL receptor, low-densi 99.7 1E-14 3.4E-19 136.6 27.9 147 130-300 29-185 (316)
37 3s94_A LRP-6, low-density lipo 99.7 1.1E-14 3.9E-19 148.1 30.5 193 65-303 36-236 (619)
38 3v9f_A Two-component system se 99.7 1.5E-15 5E-20 159.4 24.3 231 71-389 365-608 (781)
39 1q7f_A NHL, brain tumor CG1071 99.7 1.6E-15 5.5E-20 139.0 20.7 185 67-298 75-269 (286)
40 3hrp_A Uncharacterized protein 99.7 5.6E-15 1.9E-19 143.4 23.1 193 68-302 171-402 (409)
41 3fvz_A Peptidyl-glycine alpha- 99.7 2.1E-15 7E-20 141.8 19.3 207 65-302 87-314 (329)
42 3p5b_L Low density lipoprotein 99.7 2.1E-14 7.2E-19 138.8 26.2 147 130-300 111-267 (400)
43 3s94_A LRP-6, low-density lipo 99.7 9.4E-15 3.2E-19 148.8 24.9 192 67-303 347-544 (619)
44 4a2l_A BT_4663, two-component 99.7 9.7E-15 3.3E-19 153.4 25.3 224 72-381 409-650 (795)
45 3v9f_A Two-component system se 99.7 2.4E-14 8.1E-19 150.1 27.0 231 71-380 315-557 (781)
46 2ism_A Putative oxidoreductase 99.7 7.1E-15 2.4E-19 139.7 20.7 210 67-301 29-288 (352)
47 3m0c_C LDL receptor, low-densi 99.6 4.7E-14 1.6E-18 146.8 25.4 147 130-300 423-579 (791)
48 3sov_A LRP-6, low-density lipo 99.6 1E-13 3.5E-18 129.8 25.0 148 130-301 34-188 (318)
49 3m0c_C LDL receptor, low-densi 99.6 4.7E-14 1.6E-18 146.8 24.7 194 67-303 422-625 (791)
50 1n7d_A LDL receptor, low-densi 99.6 2.3E-15 8E-20 155.5 14.0 213 67-323 404-623 (699)
51 2fp8_A Strictosidine synthase; 99.6 2.7E-14 9.1E-19 133.7 19.1 185 69-300 80-303 (322)
52 2p9w_A MAL S 1 allergenic prot 99.6 1.3E-13 4.4E-18 127.5 20.8 196 68-298 12-253 (334)
53 4a0p_A LRP6, LRP-6, low-densit 99.6 7.4E-13 2.5E-17 135.0 28.6 147 130-300 36-187 (628)
54 4hw6_A Hypothetical protein, I 99.6 6.2E-14 2.1E-18 136.9 19.6 190 66-302 179-425 (433)
55 3e5z_A Putative gluconolactona 99.6 3.7E-13 1.3E-17 123.9 22.9 182 68-299 68-277 (296)
56 3dsm_A Uncharacterized protein 99.6 4.4E-13 1.5E-17 125.9 23.6 185 69-298 44-244 (328)
57 3tc9_A Hypothetical hydrolase; 99.6 1.1E-13 3.9E-18 134.9 19.9 190 67-302 177-422 (430)
58 3vgz_A Uncharacterized protein 99.6 4.8E-12 1.6E-16 118.6 30.1 194 69-302 41-254 (353)
59 3hfq_A Uncharacterized protein 99.6 2.2E-12 7.4E-17 121.3 27.2 196 68-302 39-263 (347)
60 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 7.5E-13 2.6E-17 122.4 21.0 184 69-300 71-289 (314)
61 3g4e_A Regucalcin; six bladed 99.5 7E-13 2.4E-17 122.6 20.4 184 69-300 54-263 (297)
62 1n7d_A LDL receptor, low-densi 99.5 3.2E-13 1.1E-17 139.5 19.7 147 130-300 405-561 (699)
63 3ott_A Two-component system se 99.5 1.3E-12 4.5E-17 136.4 24.7 187 72-300 327-537 (758)
64 2dg1_A DRP35, lactonase; beta 99.5 5.9E-13 2E-17 124.5 19.5 148 131-300 45-203 (333)
65 2qe8_A Uncharacterized protein 99.5 1.5E-12 5E-17 123.1 21.4 195 66-300 64-311 (343)
66 3vgz_A Uncharacterized protein 99.5 3.8E-12 1.3E-16 119.3 23.5 189 71-300 143-335 (353)
67 3dr2_A Exported gluconolactona 99.5 1.9E-12 6.3E-17 120.1 20.1 186 69-299 86-297 (305)
68 3das_A Putative oxidoreductase 99.5 1.1E-11 3.8E-16 116.5 25.4 182 59-263 23-232 (347)
69 3hxj_A Pyrrolo-quinoline quino 99.5 9.9E-12 3.4E-16 115.6 24.4 212 74-382 103-315 (330)
70 3kya_A Putative phosphatase; s 99.5 4.6E-12 1.6E-16 124.3 22.2 193 67-302 184-467 (496)
71 3ott_A Two-component system se 99.5 5.5E-12 1.9E-16 131.7 23.0 185 71-300 375-578 (758)
72 3u4y_A Uncharacterized protein 99.5 7E-11 2.4E-15 109.8 28.1 188 68-300 40-242 (331)
73 2g8s_A Glucose/sorbosone dehyd 99.4 1.8E-11 6.2E-16 116.2 21.6 176 67-262 16-227 (353)
74 3hfq_A Uncharacterized protein 99.4 1.1E-10 3.8E-15 109.5 26.9 200 68-299 85-306 (347)
75 1ri6_A Putative isomerase YBHE 99.4 2E-10 6.8E-15 106.8 27.4 194 69-303 38-255 (343)
76 3no2_A Uncharacterized protein 99.4 1.6E-10 5.4E-15 105.8 25.4 226 69-369 37-272 (276)
77 3scy_A Hypothetical bacterial 99.4 2.9E-10 9.9E-15 107.4 27.6 191 67-299 48-279 (361)
78 1l0q_A Surface layer protein; 99.4 7.5E-10 2.5E-14 105.3 30.7 184 69-298 32-219 (391)
79 2p4o_A Hypothetical protein; p 99.4 2.5E-11 8.6E-16 112.7 19.2 184 69-300 72-279 (306)
80 2ism_A Putative oxidoreductase 99.4 2.3E-11 8E-16 115.4 18.6 199 68-299 74-334 (352)
81 3no2_A Uncharacterized protein 99.4 7.8E-10 2.7E-14 101.2 27.1 175 79-300 4-185 (276)
82 1jof_A Carboxy-CIS,CIS-muconat 99.3 6.2E-10 2.1E-14 105.7 25.4 191 68-299 39-275 (365)
83 2ghs_A AGR_C_1268P; regucalcin 99.3 1.4E-10 4.9E-15 108.6 20.6 181 70-300 91-293 (326)
84 3u4y_A Uncharacterized protein 99.3 1.7E-09 5.8E-14 100.4 25.4 189 75-303 4-200 (331)
85 3a9g_A Putative uncharacterize 99.3 9.2E-10 3.1E-14 104.4 23.1 157 130-301 28-219 (354)
86 3bws_A Protein LP49; two-domai 99.3 6.3E-09 2.2E-13 100.3 29.1 192 70-299 171-365 (433)
87 3hxj_A Pyrrolo-quinoline quino 99.3 7.3E-10 2.5E-14 102.9 21.5 175 72-300 140-315 (330)
88 1ri6_A Putative isomerase YBHE 99.3 9.2E-10 3.1E-14 102.2 22.0 191 70-299 85-297 (343)
89 3bws_A Protein LP49; two-domai 99.2 3.9E-09 1.3E-13 101.8 26.2 196 70-305 124-329 (433)
90 1l0q_A Surface layer protein; 99.2 1.2E-08 4.2E-13 96.8 27.8 176 82-303 4-182 (391)
91 2iwa_A Glutamine cyclotransfer 99.2 2.9E-09 9.8E-14 96.3 21.6 185 65-300 17-227 (266)
92 3das_A Putative oxidoreductase 99.2 4.4E-09 1.5E-13 98.8 23.3 154 130-300 31-222 (347)
93 1nir_A Nitrite reductase; hemo 99.2 6.3E-09 2.2E-13 104.4 25.1 188 70-298 180-389 (543)
94 2p9w_A MAL S 1 allergenic prot 99.2 1.7E-09 5.9E-14 100.0 19.1 164 130-302 12-207 (334)
95 1pby_B Quinohemoprotein amine 99.2 9.1E-09 3.1E-13 95.1 24.4 184 70-296 35-258 (337)
96 1cru_A Protein (soluble quinop 99.2 8E-10 2.8E-14 108.2 17.3 180 61-257 20-249 (454)
97 3qqz_A Putative uncharacterize 99.2 1.2E-08 4.2E-13 91.6 23.3 190 69-299 27-243 (255)
98 3scy_A Hypothetical bacterial 99.2 2.7E-08 9.2E-13 93.7 27.0 202 69-299 100-326 (361)
99 2iwa_A Glutamine cyclotransfer 99.1 4E-09 1.4E-13 95.4 18.9 158 67-266 64-237 (266)
100 1jmx_B Amine dehydrogenase; ox 99.1 7.3E-09 2.5E-13 96.4 20.2 204 70-296 44-312 (349)
101 1nir_A Nitrite reductase; hemo 99.1 3.5E-08 1.2E-12 98.9 26.2 184 75-302 144-347 (543)
102 1gxr_A ESG1, transducin-like e 99.1 2.8E-07 9.7E-12 84.8 29.2 188 70-302 99-288 (337)
103 3nol_A Glutamine cyclotransfer 99.0 1.9E-08 6.3E-13 90.1 19.2 153 70-265 88-255 (262)
104 1jof_A Carboxy-CIS,CIS-muconat 99.0 2.8E-08 9.5E-13 94.2 21.4 150 130-299 144-330 (365)
105 3nok_A Glutaminyl cyclase; bet 99.0 2.5E-08 8.4E-13 89.4 18.8 152 70-264 97-264 (268)
106 1jmx_B Amine dehydrogenase; ox 99.0 8.5E-08 2.9E-12 89.1 23.3 141 135-296 4-164 (349)
107 1pby_B Quinohemoprotein amine 99.0 8.8E-08 3E-12 88.4 23.0 193 70-296 83-297 (337)
108 3mbr_X Glutamine cyclotransfer 99.0 5.2E-08 1.8E-12 86.5 20.2 153 70-265 66-234 (243)
109 3ow8_A WD repeat-containing pr 99.0 1.1E-06 3.8E-11 81.6 30.1 196 65-305 77-274 (321)
110 3c75_H MADH, methylamine dehyd 98.9 1.1E-07 3.6E-12 92.0 21.8 96 78-195 82-196 (426)
111 1qks_A Cytochrome CD1 nitrite 98.9 3.8E-07 1.3E-11 91.7 26.4 190 69-298 197-408 (567)
112 1cru_A Protein (soluble quinop 98.9 1.7E-08 5.8E-13 98.8 16.1 164 130-300 26-248 (454)
113 3q6k_A 43.2 kDa salivary prote 98.9 2.2E-07 7.4E-12 88.0 22.9 153 130-300 86-296 (381)
114 1gxr_A ESG1, transducin-like e 98.9 2.4E-06 8E-11 78.6 29.8 192 69-303 52-248 (337)
115 3qqz_A Putative uncharacterize 98.9 6.3E-07 2.1E-11 80.4 24.7 198 130-389 26-250 (255)
116 4g56_B MGC81050 protein; prote 98.9 2.4E-07 8.3E-12 87.5 23.3 195 71-299 45-247 (357)
117 3zwl_B Eukaryotic translation 98.9 2E-06 6.9E-11 80.0 29.3 198 68-305 32-244 (369)
118 2hqs_A Protein TOLB; TOLB, PAL 98.9 5E-07 1.7E-11 87.2 25.5 179 70-296 180-370 (415)
119 2oiz_A Aromatic amine dehydrog 98.9 1.4E-07 4.7E-12 89.5 21.0 72 215-292 286-360 (361)
120 2ece_A 462AA long hypothetical 98.9 3.7E-07 1.3E-11 87.9 23.1 260 78-355 93-399 (462)
121 2ymu_A WD-40 repeat protein; u 98.9 2.1E-06 7E-11 85.8 29.9 186 70-303 223-409 (577)
122 4ery_A WD repeat-containing pr 98.9 3.2E-06 1.1E-10 77.6 28.7 193 68-305 23-218 (312)
123 2g8s_A Glucose/sorbosone dehyd 98.9 1.3E-08 4.5E-13 96.4 12.7 159 130-300 17-218 (353)
124 3ei3_B DNA damage-binding prot 98.9 1.5E-06 5.2E-11 82.1 27.1 203 69-310 74-282 (383)
125 3nol_A Glutamine cyclotransfer 98.9 2.4E-07 8.1E-12 83.0 19.9 171 72-297 46-243 (262)
126 2ymu_A WD-40 repeat protein; u 98.9 2.2E-06 7.7E-11 85.5 29.6 187 70-304 305-492 (577)
127 3nok_A Glutaminyl cyclase; bet 98.9 2.7E-07 9.3E-12 82.6 19.8 156 134-321 58-217 (268)
128 3c75_H MADH, methylamine dehyd 98.9 1E-07 3.4E-12 92.2 18.3 209 69-298 119-389 (426)
129 1k8k_C P40, ARP2/3 complex 41 98.8 3E-06 1E-10 79.2 27.8 192 70-302 10-225 (372)
130 1got_B GT-beta; complex (GTP-b 98.8 2E-06 6.8E-11 80.3 26.4 188 71-303 100-294 (340)
131 2ece_A 462AA long hypothetical 98.8 5.9E-07 2E-11 86.4 21.8 196 68-297 137-399 (462)
132 1fwx_A Nitrous oxide reductase 98.8 4.8E-07 1.6E-11 90.0 20.7 266 63-358 82-409 (595)
133 2hqs_A Protein TOLB; TOLB, PAL 98.8 4.6E-06 1.6E-10 80.4 26.8 144 131-297 179-328 (415)
134 2mad_H Methylamine dehydrogena 98.8 1.7E-06 5.8E-11 82.4 23.4 209 69-298 67-337 (373)
135 3sjl_D Methylamine dehydrogena 98.7 1.1E-06 3.8E-11 83.6 21.1 191 69-298 79-299 (386)
136 2ojh_A Uncharacterized protein 98.7 3.6E-06 1.2E-10 75.5 23.7 183 70-296 43-233 (297)
137 4e54_B DNA damage-binding prot 98.7 1.5E-06 5.3E-11 84.0 22.5 195 71-306 122-323 (435)
138 3ow8_A WD repeat-containing pr 98.7 3E-06 1E-10 78.6 23.4 186 70-301 124-312 (321)
139 4ery_A WD repeat-containing pr 98.7 1.9E-05 6.6E-10 72.2 28.6 155 69-266 66-223 (312)
140 3sjl_D Methylamine dehydrogena 98.7 8E-06 2.7E-10 77.7 25.7 147 75-259 39-212 (386)
141 1mda_H Methylamine dehydrogena 98.7 3.8E-07 1.3E-11 86.6 16.5 210 69-302 66-338 (368)
142 4a9v_A PHOX; hydrolase, beta-p 98.7 9E-08 3.1E-12 94.2 12.2 76 173-254 472-550 (592)
143 2pm9_A Protein WEB1, protein t 98.7 1.2E-05 4E-10 76.5 26.6 196 70-304 69-288 (416)
144 3fm0_A Protein CIAO1; WDR39,SG 98.7 9.4E-06 3.2E-10 75.9 25.4 194 72-305 20-220 (345)
145 2wg3_C Hedgehog-interacting pr 98.7 2.1E-06 7.1E-11 84.0 21.3 175 67-254 12-242 (463)
146 1qks_A Cytochrome CD1 nitrite 98.7 4.7E-06 1.6E-10 83.7 24.3 198 76-323 163-382 (567)
147 2ynn_A Coatomer subunit beta'; 98.7 1.9E-05 6.6E-10 72.3 26.5 158 66-266 11-172 (304)
148 3zwl_B Eukaryotic translation 98.7 6.9E-06 2.4E-10 76.3 23.7 187 70-299 76-279 (369)
149 2oiz_A Aromatic amine dehydrog 98.6 5.9E-06 2E-10 78.2 23.0 95 79-195 14-127 (361)
150 3vl1_A 26S proteasome regulato 98.6 1.4E-05 4.6E-10 76.3 25.8 154 69-266 57-212 (420)
151 2ojh_A Uncharacterized protein 98.6 1.1E-05 3.8E-10 72.2 23.9 146 131-297 42-191 (297)
152 2mad_H Methylamine dehydrogena 98.6 1.4E-05 4.9E-10 75.9 25.0 112 78-228 30-160 (373)
153 3s25_A Hypothetical 7-bladed b 98.6 8.8E-06 3E-10 75.1 22.7 176 137-391 110-292 (302)
154 1erj_A Transcriptional repress 98.6 5.7E-05 1.9E-09 71.9 29.3 151 72-266 127-287 (393)
155 4gqb_B Methylosome protein 50; 98.6 4.4E-06 1.5E-10 78.5 21.1 150 133-303 85-239 (344)
156 3sre_A PON1, serum paraoxonase 98.6 5.1E-06 1.7E-10 78.2 21.2 153 133-305 52-247 (355)
157 4gqb_B Methylosome protein 50; 98.6 2.2E-05 7.6E-10 73.6 25.7 189 71-303 85-282 (344)
158 1got_B GT-beta; complex (GTP-b 98.6 3.1E-05 1.1E-09 72.1 26.6 196 66-305 53-252 (340)
159 3mbr_X Glutamine cyclotransfer 98.6 9.9E-06 3.4E-10 71.8 21.5 152 176-390 20-177 (243)
160 2z3z_A Dipeptidyl aminopeptida 98.6 9.6E-06 3.3E-10 83.3 24.6 148 131-297 258-418 (706)
161 2ecf_A Dipeptidyl peptidase IV 98.6 4.6E-06 1.6E-10 86.2 22.1 160 69-253 37-227 (741)
162 1vyh_C Platelet-activating fac 98.6 2.5E-05 8.6E-10 74.9 25.9 190 70-304 152-363 (410)
163 1vyh_C Platelet-activating fac 98.6 2.4E-05 8.1E-10 75.1 25.6 154 70-266 110-265 (410)
164 1r5m_A SIR4-interacting protei 98.6 8E-05 2.8E-09 70.4 29.0 198 69-303 46-271 (425)
165 2aq5_A Coronin-1A; WD40 repeat 98.6 2.1E-05 7E-10 75.0 24.7 201 70-303 83-292 (402)
166 3jrp_A Fusion protein of prote 98.6 4.9E-05 1.7E-09 70.8 26.6 195 69-304 12-234 (379)
167 1yfq_A Cell cycle arrest prote 98.6 5E-06 1.7E-10 76.8 19.5 189 70-303 13-218 (342)
168 2aq5_A Coronin-1A; WD40 repeat 98.6 1.4E-05 4.8E-10 76.1 23.1 191 69-295 132-329 (402)
169 4aez_A CDC20, WD repeat-contai 98.6 5.9E-05 2E-09 71.8 27.2 182 70-298 136-322 (401)
170 3dwl_C Actin-related protein 2 98.6 1.6E-06 5.4E-11 81.6 16.0 196 70-305 13-231 (377)
171 3frx_A Guanine nucleotide-bind 98.6 0.00016 5.5E-09 66.6 29.4 197 66-306 15-223 (319)
172 1r5m_A SIR4-interacting protei 98.5 1.4E-05 4.8E-10 75.7 22.5 204 69-303 150-354 (425)
173 4g56_B MGC81050 protein; prote 98.5 3.3E-06 1.1E-10 79.6 17.8 190 71-302 142-335 (357)
174 3mkq_A Coatomer beta'-subunit; 98.5 5.7E-05 2E-09 78.5 28.7 194 66-304 11-211 (814)
175 3frx_A Guanine nucleotide-bind 98.5 0.00014 4.8E-09 67.0 28.2 182 70-298 67-256 (319)
176 3o4h_A Acylamino-acid-releasin 98.5 2.2E-06 7.7E-11 86.1 17.1 146 135-303 114-269 (582)
177 3pe7_A Oligogalacturonate lyas 98.5 2E-05 6.8E-10 74.3 22.2 199 74-297 41-257 (388)
178 1pgu_A Actin interacting prote 98.5 5.2E-05 1.8E-09 75.8 26.4 197 70-305 20-233 (615)
179 2pbi_B Guanine nucleotide-bind 98.5 6.6E-05 2.2E-09 70.5 25.4 196 70-303 108-308 (354)
180 3vl1_A 26S proteasome regulato 98.5 6.7E-05 2.3E-09 71.4 25.8 159 69-266 140-322 (420)
181 4aez_A CDC20, WD repeat-contai 98.5 4.2E-05 1.4E-09 72.8 24.3 187 72-300 180-370 (401)
182 1k8k_C P40, ARP2/3 complex 41 98.5 1.7E-05 5.8E-10 74.0 20.9 188 70-297 54-262 (372)
183 2z3z_A Dipeptidyl aminopeptida 98.5 5.5E-05 1.9E-09 77.6 26.5 202 69-296 82-328 (706)
184 3q7m_A Lipoprotein YFGL, BAMB; 98.5 6.7E-05 2.3E-09 70.8 25.1 244 79-383 103-370 (376)
185 4a11_B DNA excision repair pro 98.5 0.00014 4.8E-09 68.4 27.4 204 69-305 44-271 (408)
186 3f3f_A Nucleoporin SEH1; struc 98.5 9.9E-05 3.4E-09 67.4 25.7 194 69-305 12-244 (351)
187 4h5i_A Guanine nucleotide-exch 98.5 1.5E-05 5E-10 75.4 20.4 193 71-303 136-336 (365)
188 3k26_A Polycomb protein EED; W 98.5 4.3E-05 1.5E-09 70.9 23.2 193 70-303 71-311 (366)
189 2ecf_A Dipeptidyl peptidase IV 98.5 1.7E-05 6E-10 81.8 22.4 203 71-298 111-355 (741)
190 2xzm_R RACK1; ribosome, transl 98.5 0.00029 9.9E-09 65.5 28.8 185 70-297 78-273 (343)
191 3i2n_A WD repeat-containing pr 98.4 3.1E-05 1.1E-09 71.7 21.3 195 70-303 67-284 (357)
192 1fwx_A Nitrous oxide reductase 98.4 4E-05 1.4E-09 76.2 22.1 187 68-299 133-407 (595)
193 2pbi_B Guanine nucleotide-bind 98.4 6.7E-05 2.3E-09 70.4 23.0 186 71-300 157-347 (354)
194 2xyi_A Probable histone-bindin 98.4 6.6E-05 2.3E-09 72.3 23.4 210 69-308 129-351 (430)
195 2vdu_B TRNA (guanine-N(7)-)-me 98.4 7.6E-05 2.6E-09 72.3 23.7 159 70-266 104-271 (450)
196 1nr0_A Actin interacting prote 98.4 0.00015 5E-09 73.4 26.5 102 70-194 241-342 (611)
197 3ei3_B DNA damage-binding prot 98.4 5.7E-05 2E-09 71.1 22.1 154 70-266 120-282 (383)
198 1erj_A Transcriptional repress 98.4 0.0004 1.4E-08 65.9 28.1 209 70-306 66-283 (393)
199 1sq9_A Antiviral protein SKI8; 98.4 8.7E-05 3E-09 69.9 23.3 193 70-303 64-315 (397)
200 4h5i_A Guanine nucleotide-exch 98.4 0.0003 1E-08 66.3 26.7 103 178-298 135-238 (365)
201 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00027 9.1E-09 66.6 26.2 260 73-389 48-334 (376)
202 3pe7_A Oligogalacturonate lyas 98.4 9.7E-06 3.3E-10 76.5 16.0 177 73-292 85-302 (388)
203 2xzm_R RACK1; ribosome, transl 98.4 0.00056 1.9E-08 63.5 27.8 191 70-306 23-240 (343)
204 3k26_A Polycomb protein EED; W 98.3 0.00042 1.4E-08 64.0 26.8 158 69-266 19-192 (366)
205 3sfz_A APAF-1, apoptotic pepti 98.3 0.00055 1.9E-08 74.8 31.6 156 68-266 615-774 (1249)
206 2vdu_B TRNA (guanine-N(7)-)-me 98.3 7.8E-05 2.7E-09 72.2 21.6 191 69-299 150-373 (450)
207 3dwl_C Actin-related protein 2 98.3 1.2E-05 4.2E-10 75.5 15.1 189 70-300 57-272 (377)
208 3dw8_B Serine/threonine-protei 98.3 0.00036 1.2E-08 66.8 25.8 209 70-306 30-311 (447)
209 3dm0_A Maltose-binding peripla 98.3 0.001 3.5E-08 68.2 30.6 188 69-299 431-622 (694)
210 3s25_A Hypothetical 7-bladed b 98.3 0.00013 4.6E-09 67.1 21.4 136 79-267 24-177 (302)
211 1nr0_A Actin interacting prote 98.3 0.00011 3.6E-09 74.4 22.7 195 70-306 20-217 (611)
212 2xyi_A Probable histone-bindin 98.3 6.2E-05 2.1E-09 72.5 20.0 193 70-301 183-401 (430)
213 3mkq_A Coatomer beta'-subunit; 98.3 8E-05 2.7E-09 77.4 22.1 191 70-305 57-254 (814)
214 1mda_H Methylamine dehydrogena 98.3 2.6E-05 9E-10 73.9 16.4 200 69-290 124-367 (368)
215 3iz6_a 40S ribosomal protein R 98.3 0.00067 2.3E-08 64.0 26.3 196 70-306 68-276 (380)
216 3q6k_A 43.2 kDa salivary prote 98.3 0.00029 1E-08 66.5 23.3 201 67-299 85-343 (381)
217 3lrv_A PRE-mRNA-splicing facto 98.3 0.00054 1.8E-08 63.6 25.2 188 78-308 46-242 (343)
218 2pm7_B Protein transport prote 98.2 0.00056 1.9E-08 62.1 24.7 195 70-305 11-233 (297)
219 3odt_A Protein DOA1; ubiquitin 98.2 0.00094 3.2E-08 60.2 26.1 180 70-299 61-245 (313)
220 3fm0_A Protein CIAO1; WDR39,SG 98.2 0.00091 3.1E-08 62.2 26.3 155 70-264 63-223 (345)
221 3azo_A Aminopeptidase; POP fam 98.2 0.00013 4.5E-09 74.1 21.6 157 70-266 131-325 (662)
222 2ynn_A Coatomer subunit beta'; 98.2 0.00068 2.3E-08 61.8 24.5 190 71-305 58-254 (304)
223 3jrp_A Fusion protein of prote 98.2 0.00051 1.7E-08 63.8 23.9 155 131-306 12-187 (379)
224 3v7d_B Cell division control p 98.2 0.0031 1.1E-07 60.7 30.2 181 78-305 130-336 (464)
225 3odt_A Protein DOA1; ubiquitin 98.2 0.0009 3.1E-08 60.3 24.8 183 69-299 19-204 (313)
226 3mmy_A MRNA export factor; mRN 98.2 0.00025 8.6E-09 65.5 21.5 101 69-194 40-147 (368)
227 3dm0_A Maltose-binding peripla 98.2 0.00065 2.2E-08 69.6 25.6 194 70-306 384-588 (694)
228 2pm9_A Protein WEB1, protein t 98.1 0.00012 4.1E-09 69.3 18.5 208 70-305 115-332 (416)
229 3sfz_A APAF-1, apoptotic pepti 98.1 0.00059 2E-08 74.6 26.1 208 69-305 883-1111(1249)
230 3i2n_A WD repeat-containing pr 98.1 0.00066 2.2E-08 62.5 22.9 193 69-304 19-237 (357)
231 3o4h_A Acylamino-acid-releasin 98.1 8.2E-05 2.8E-09 74.6 17.6 173 71-296 24-211 (582)
232 3iz6_a 40S ribosomal protein R 98.1 0.00053 1.8E-08 64.7 22.4 156 72-266 209-375 (380)
233 3jro_A Fusion protein of prote 98.1 0.00041 1.4E-08 72.0 22.6 195 70-305 11-233 (753)
234 1k32_A Tricorn protease; prote 98.1 0.0011 3.8E-08 71.3 26.5 148 71-254 340-491 (1045)
235 1sq9_A Antiviral protein SKI8; 98.1 0.00027 9.4E-09 66.4 19.3 164 69-266 187-395 (397)
236 4aow_A Guanine nucleotide-bind 98.1 0.0065 2.2E-07 55.3 29.6 187 69-299 87-276 (340)
237 3bg1_A Protein SEC13 homolog; 98.1 0.00067 2.3E-08 62.3 21.3 194 70-305 15-242 (316)
238 1pgu_A Actin interacting prote 98.1 0.0014 4.9E-08 65.2 25.4 188 71-305 67-278 (615)
239 3azo_A Aminopeptidase; POP fam 98.1 0.00087 3E-08 68.0 24.0 152 140-299 88-261 (662)
240 2hes_X YDR267CP; beta-propelle 98.0 0.0077 2.6E-07 55.4 29.2 191 72-303 18-223 (330)
241 3lrv_A PRE-mRNA-splicing facto 98.0 0.0027 9.1E-08 58.8 25.0 192 72-299 80-280 (343)
242 4aow_A Guanine nucleotide-bind 98.0 0.00075 2.6E-08 61.7 20.9 191 70-302 130-329 (340)
243 2j04_A TAU60, YPL007P, hypothe 98.0 0.0015 5E-08 65.0 23.6 183 69-296 86-284 (588)
244 3dw8_B Serine/threonine-protei 98.0 0.0013 4.4E-08 62.8 22.9 165 68-266 177-373 (447)
245 1k32_A Tricorn protease; prote 98.0 0.00015 5.1E-09 78.2 17.9 180 70-297 297-490 (1045)
246 3amr_A 3-phytase; beta-propell 98.0 0.00046 1.6E-08 64.3 18.6 135 142-299 39-200 (355)
247 1xfd_A DIP, dipeptidyl aminope 98.0 0.00068 2.3E-08 69.5 22.0 202 70-295 62-322 (723)
248 3b7f_A Glycosyl hydrolase, BNR 98.0 0.00038 1.3E-08 66.3 18.4 179 76-299 19-253 (394)
249 3gre_A Serine/threonine-protei 98.0 0.0016 5.4E-08 62.3 22.6 161 69-266 64-245 (437)
250 1yfq_A Cell cycle arrest prote 98.0 0.0005 1.7E-08 63.1 18.2 189 69-302 57-274 (342)
251 4gga_A P55CDC, cell division c 98.0 0.0051 1.7E-07 58.6 25.9 179 72-297 151-338 (420)
252 2oaj_A Protein SNI1; WD40 repe 97.9 0.00062 2.1E-08 72.2 21.0 191 69-306 18-238 (902)
253 4a5s_A Dipeptidyl peptidase 4 97.9 0.0032 1.1E-07 65.0 26.0 174 72-267 65-295 (740)
254 1z68_A Fibroblast activation p 97.9 0.00064 2.2E-08 69.8 19.9 198 70-292 61-324 (719)
255 4e54_B DNA damage-binding prot 97.9 0.001 3.5E-08 63.9 20.1 152 131-305 120-277 (435)
256 3mmy_A MRNA export factor; mRN 97.9 0.001 3.4E-08 61.4 19.3 206 69-299 87-335 (368)
257 4a11_B DNA excision repair pro 97.9 0.0017 5.7E-08 60.9 21.0 155 69-266 100-276 (408)
258 3f3f_A Nucleoporin SEH1; struc 97.9 0.0021 7.2E-08 58.4 21.0 160 69-266 58-249 (351)
259 3amr_A 3-phytase; beta-propell 97.9 0.0033 1.1E-07 58.5 21.8 137 145-300 89-253 (355)
260 3b7f_A Glycosyl hydrolase, BNR 97.9 0.0012 3.9E-08 62.9 19.5 196 70-298 56-298 (394)
261 1xfd_A DIP, dipeptidyl aminope 97.9 0.0016 5.6E-08 66.6 21.9 152 133-298 257-428 (723)
262 3c5m_A Oligogalacturonate lyas 97.8 0.0012 4E-08 61.9 18.9 197 71-296 38-255 (396)
263 1tl2_A L10, protein (tachylect 97.8 0.00075 2.6E-08 58.4 15.5 168 55-263 27-207 (236)
264 4gga_A P55CDC, cell division c 97.8 0.0037 1.3E-07 59.6 22.5 193 76-306 195-391 (420)
265 3jro_A Fusion protein of prote 97.8 0.0018 6.1E-08 67.2 21.4 139 131-289 10-155 (753)
266 2j04_A TAU60, YPL007P, hypothe 97.8 0.00066 2.3E-08 67.4 16.8 144 71-253 132-286 (588)
267 2xdw_A Prolyl endopeptidase; a 97.8 0.0076 2.6E-07 61.9 25.3 190 72-298 128-354 (710)
268 3vu4_A KMHSV2; beta-propeller 97.8 0.022 7.5E-07 53.0 26.3 212 70-308 21-269 (355)
269 2hes_X YDR267CP; beta-propelle 97.8 0.0055 1.9E-07 56.4 21.9 156 70-266 60-230 (330)
270 3bg1_A Protein SEC13 homolog; 97.8 0.0057 1.9E-07 55.9 21.7 203 71-299 60-282 (316)
271 3v7d_B Cell division control p 97.8 0.0026 9E-08 61.2 20.4 147 75-266 275-421 (464)
272 2ovr_B FBW7, F-BOX/WD repeat p 97.7 0.033 1.1E-06 53.2 28.7 144 75-266 124-268 (445)
273 2gop_A Trilobed protease; beta 97.7 0.011 3.6E-07 54.4 23.5 150 69-263 59-250 (347)
274 1z68_A Fibroblast activation p 97.6 0.00039 1.3E-08 71.4 12.9 136 71-253 18-187 (719)
275 3vu4_A KMHSV2; beta-propeller 97.6 0.014 4.8E-07 54.3 22.2 72 178-267 197-272 (355)
276 3zwu_A Alkaline phosphatase PH 97.6 0.00073 2.5E-08 67.5 13.5 119 129-252 382-548 (592)
277 1p22_A F-BOX/WD-repeat protein 97.6 0.038 1.3E-06 52.7 25.2 144 75-266 138-285 (435)
278 2wg3_C Hedgehog-interacting pr 97.5 0.0024 8.3E-08 62.2 16.3 159 130-295 13-237 (463)
279 3gre_A Serine/threonine-protei 97.5 0.028 9.7E-07 53.4 23.6 163 70-265 113-291 (437)
280 3c5m_A Oligogalacturonate lyas 97.5 0.0051 1.8E-07 57.4 17.9 116 133-266 190-329 (396)
281 4ggc_A P55CDC, cell division c 97.5 0.026 9E-07 50.6 21.9 217 69-303 68-308 (318)
282 2ad6_A Methanol dehydrogenase 97.5 0.055 1.9E-06 54.1 25.6 43 337-381 483-526 (571)
283 2oit_A Nucleoporin 214KDA; NH2 97.4 0.0034 1.2E-07 60.6 16.1 157 71-265 95-277 (434)
284 4a5s_A Dipeptidyl peptidase 4 97.4 0.0064 2.2E-07 62.8 18.4 137 73-252 21-188 (740)
285 2pm7_B Protein transport prote 97.4 0.071 2.4E-06 47.9 24.9 115 131-266 10-132 (297)
286 2xbg_A YCF48-like protein; pho 97.4 0.085 2.9E-06 48.5 24.5 175 72-298 83-268 (327)
287 2oaj_A Protein SNI1; WD40 repe 97.4 0.01 3.5E-07 62.8 19.8 154 71-265 61-241 (902)
288 1kb0_A Quinohemoprotein alcoho 97.3 0.08 2.7E-06 54.1 25.2 42 336-379 495-537 (677)
289 1tl2_A L10, protein (tachylect 97.2 0.004 1.4E-07 53.9 12.1 107 132-262 42-159 (236)
290 2oit_A Nucleoporin 214KDA; NH2 97.2 0.0099 3.4E-07 57.3 16.4 168 71-266 39-223 (434)
291 4ggc_A P55CDC, cell division c 97.2 0.11 3.7E-06 46.5 27.0 99 178-296 152-257 (318)
292 2j04_B YDR362CP, TAU91; beta p 97.1 0.014 4.9E-07 57.7 17.1 197 70-304 209-422 (524)
293 1p22_A F-BOX/WD-repeat protein 97.1 0.1 3.5E-06 49.6 22.3 148 72-266 177-325 (435)
294 2ovr_B FBW7, F-BOX/WD repeat p 97.1 0.21 7.2E-06 47.5 28.9 145 72-266 163-308 (445)
295 2xbg_A YCF48-like protein; pho 97.1 0.07 2.4E-06 49.1 20.1 143 72-262 125-275 (327)
296 2xdw_A Prolyl endopeptidase; a 97.0 0.046 1.6E-06 56.0 19.7 186 71-299 173-400 (710)
297 2gop_A Trilobed protease; beta 97.0 0.032 1.1E-06 51.1 16.9 115 154-297 45-187 (347)
298 1w6s_A Methanol dehydrogenase 96.9 0.32 1.1E-05 48.9 24.9 43 336-380 491-534 (599)
299 4a9v_A PHOX; hydrolase, beta-p 96.9 0.0058 2E-07 60.3 11.5 123 174-300 381-552 (592)
300 2bkl_A Prolyl endopeptidase; m 96.9 0.088 3E-06 53.7 20.6 159 71-267 123-305 (695)
301 2hz6_A Endoplasmic reticulum t 96.9 0.0019 6.5E-08 61.0 7.4 143 73-265 4-148 (369)
302 2j04_B YDR362CP, TAU91; beta p 96.8 0.053 1.8E-06 53.6 18.1 153 131-305 208-381 (524)
303 4gq1_A NUP37; propeller, trans 96.8 0.11 3.9E-06 48.8 19.2 189 71-299 139-379 (393)
304 3iuj_A Prolyl endopeptidase; h 96.8 0.41 1.4E-05 48.8 24.7 139 135-292 179-338 (693)
305 1kb0_A Quinohemoprotein alcoho 96.8 0.23 7.9E-06 50.6 22.6 83 214-300 456-540 (677)
306 1yr2_A Prolyl oligopeptidase; 96.7 0.2 6.7E-06 51.6 21.5 116 135-267 213-351 (741)
307 2bkl_A Prolyl endopeptidase; m 96.5 0.34 1.2E-05 49.3 22.1 180 72-297 171-381 (695)
308 1flg_A Protein (quinoprotein e 96.5 0.48 1.7E-05 47.3 22.3 43 336-380 504-547 (582)
309 3zwu_A Alkaline phosphatase PH 96.5 0.03 1E-06 55.9 13.2 124 65-194 380-549 (592)
310 2w18_A PALB2, fancn, partner a 96.3 0.44 1.5E-05 44.2 19.4 151 74-263 184-354 (356)
311 1yiq_A Quinohemoprotein alcoho 96.3 0.24 8.3E-06 50.6 19.4 43 336-380 493-536 (689)
312 2ad6_A Methanol dehydrogenase 96.3 0.69 2.4E-05 46.1 22.4 84 213-300 442-527 (571)
313 1kv9_A Type II quinohemoprotei 96.2 0.28 9.7E-06 49.9 19.1 43 336-380 476-519 (668)
314 3iuj_A Prolyl endopeptidase; h 96.2 0.61 2.1E-05 47.5 21.5 111 134-266 237-359 (693)
315 1yr2_A Prolyl oligopeptidase; 96.1 0.38 1.3E-05 49.4 19.7 125 154-294 135-282 (741)
316 1kv9_A Type II quinohemoprotei 95.9 0.53 1.8E-05 47.9 19.4 82 214-300 437-521 (668)
317 3sbq_A Nitrous-oxide reductase 95.8 1.6 5.4E-05 43.0 21.3 136 216-357 299-455 (638)
318 1yiq_A Quinohemoprotein alcoho 95.8 1.1 3.9E-05 45.6 21.6 82 214-300 454-538 (689)
319 1k3i_A Galactose oxidase precu 95.8 1.8 6.3E-05 43.6 22.8 58 134-195 246-305 (656)
320 1flg_A Protein (quinoprotein e 95.6 2.1 7.3E-05 42.6 23.4 83 213-300 464-549 (582)
321 4gq1_A NUP37; propeller, trans 94.9 2.4 8.2E-05 39.4 22.7 149 78-266 99-286 (393)
322 2w18_A PALB2, fancn, partner a 94.6 2.8 9.7E-05 38.8 21.3 151 142-302 192-349 (356)
323 1w6s_A Methanol dehydrogenase 94.0 5.4 0.00018 39.8 24.0 82 213-300 451-536 (599)
324 1sqj_A OXG-RCBH, oligoxylogluc 93.8 7.2 0.00025 40.3 22.2 159 70-262 16-197 (789)
325 3a0f_A Xyloglucanase; beta-pro 93.7 7.2 0.00025 40.1 25.2 162 70-262 22-209 (763)
326 2cn3_A Xyloglucanase, beta-1,4 93.2 8.4 0.00029 39.4 22.6 108 71-194 25-151 (737)
327 2xe4_A Oligopeptidase B; hydro 92.6 6.4 0.00022 40.4 18.7 101 178-293 175-284 (751)
328 2xe4_A Oligopeptidase B; hydro 91.8 6.8 0.00023 40.1 17.8 114 134-267 177-305 (751)
329 1xip_A Nucleoporin NUP159; bet 91.2 6.3 0.00022 37.0 15.4 154 70-267 39-192 (388)
330 3ii7_A Kelch-like protein 7; p 90.6 8.6 0.00029 34.0 16.4 74 142-231 149-232 (306)
331 1xip_A Nucleoporin NUP159; bet 90.6 6.9 0.00024 36.7 15.0 133 68-252 87-231 (388)
332 2hz6_A Endoplasmic reticulum t 90.3 0.31 1.1E-05 45.5 5.4 59 187-265 9-67 (369)
333 2cn3_A Xyloglucanase, beta-1,4 89.5 8.5 0.00029 39.4 15.8 125 130-263 22-161 (737)
334 1k3i_A Galactose oxidase precu 89.1 5.3 0.00018 40.2 13.8 115 132-265 187-322 (656)
335 3a0f_A Xyloglucanase; beta-pro 88.4 8.3 0.00028 39.7 14.9 160 73-266 592-762 (763)
336 1zgk_A Kelch-like ECH-associat 85.2 20 0.00067 31.8 21.4 107 142-266 70-193 (308)
337 2woz_A Kelch repeat and BTB do 85.1 20 0.00069 31.8 15.8 74 142-231 158-238 (318)
338 2vpj_A Kelch-like protein 12; 84.1 21 0.00072 31.3 21.8 105 142-265 112-230 (301)
339 2vpj_A Kelch-like protein 12; 83.6 22 0.00075 31.1 23.4 107 142-266 62-184 (301)
340 2zwa_A Leucine carboxyl methyl 82.2 39 0.0013 34.1 16.2 81 135-226 494-579 (695)
341 1sqj_A OXG-RCBH, oligoxylogluc 81.2 45 0.0015 34.3 16.4 121 130-263 14-149 (789)
342 4asc_A Kelch repeat and BTB do 79.7 32 0.0011 30.4 18.7 103 152-266 13-126 (315)
343 2be1_A Serine/threonine-protei 78.6 6.7 0.00023 36.1 8.2 71 142-230 55-136 (339)
344 4asc_A Kelch repeat and BTB do 78.5 35 0.0012 30.1 23.8 97 154-266 69-174 (315)
345 2xn4_A Kelch-like protein 2; s 78.5 34 0.0012 29.9 18.7 74 142-231 155-236 (302)
346 3ii7_A Kelch-like protein 7; p 75.2 42 0.0014 29.4 23.8 107 142-266 55-178 (306)
347 1zgk_A Kelch-like ECH-associat 73.8 46 0.0016 29.2 20.8 106 142-266 121-240 (308)
348 2xn4_A Kelch-like protein 2; s 71.3 52 0.0018 28.7 22.6 106 142-266 61-182 (302)
349 2uvk_A YJHT; unknown function, 65.1 77 0.0026 28.3 16.0 117 90-231 168-301 (357)
350 2zwa_A Leucine carboxyl methyl 63.9 1.3E+02 0.0043 30.3 21.4 116 134-267 443-578 (695)
351 2uvk_A YJHT; unknown function, 60.4 94 0.0032 27.7 20.1 100 142-253 19-125 (357)
352 2be1_A Serine/threonine-protei 59.9 19 0.00064 33.0 6.8 71 142-228 10-80 (339)
353 3sbq_A Nitrous-oxide reductase 57.2 47 0.0016 32.8 9.2 67 127-194 319-395 (638)
354 3f6k_A Sortilin; protein sorti 54.5 1.5E+02 0.0051 29.9 12.9 34 134-167 93-133 (685)
355 3f6k_A Sortilin; protein sorti 54.3 1.8E+02 0.0063 29.2 17.0 105 145-262 58-165 (685)
356 2woz_A Kelch repeat and BTB do 44.5 1.6E+02 0.0055 25.7 23.7 108 142-266 56-184 (318)
357 2xzh_A Clathrin heavy chain 1; 27.2 3.6E+02 0.012 24.6 9.6 37 128-164 257-293 (365)
358 3oky_A Plexin-A2; transmembran 26.4 1.9E+02 0.0064 29.1 8.3 84 72-157 20-108 (681)
359 3al9_A Plexin-A2; beta-propell 21.9 2.9E+02 0.01 26.8 8.5 84 72-157 21-109 (539)
360 1bpo_A Protein (clathrin); cla 20.7 5.6E+02 0.019 24.5 10.1 37 128-164 256-292 (494)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=8.9e-35 Score=273.91 Aligned_cols=295 Identities=34% Similarity=0.635 Sum_probs=230.6
Q ss_pred ccccccCcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCc-ccCCCCCCccccccccCccCccceEEEec
Q 016318 64 FLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRS-ELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (391)
Q Consensus 64 ~~~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~P~gi~~d~ 140 (391)
..+++.+||++++|++|+++|+++.+++|++++.+ .++.+........ ..|++... ......+++|.||++++
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~p~gi~~~~ 89 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTD----AEKRPLCGRTYDISYNL 89 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCC----GGGHHHHCCEEEEEEET
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccc----hhccccCCCCceEEEcC
Confidence 35678899999999999989999999999999876 4555543211100 01211000 01122357899999995
Q ss_pred CCCcEEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 141 KTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 141 ~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
++++|||+|...+|+++|+++++++.+.....+.++..|+++++++ +|++|++++...+..+++...+++....|+|++
T Consensus 90 ~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 90 QNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 4689999999888999999988777776555555677899999999 999999997765555555555566677899999
Q ss_pred EeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcC
Q 016318 220 YDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 220 ~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
+|+++++.+.+...+..||||++++|++.+||+++.+++|++|++++...++.+.+.+++| |++|++|++|++||+...
T Consensus 170 ~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 170 YDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEE
T ss_pred EeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecC
Confidence 9999999888877888999999999999999999988999999998766666777777778 999999999999999876
Q ss_pred CCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEEECCEEEEec
Q 016318 300 RRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGS 379 (391)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~~~g~Lylgs 379 (391)
.+... |.+ ...+.+.++|++|+.+..+..++|..+..++.+...+|+||+++
T Consensus 249 ~~~~~-----------------~~~-----------~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 249 ELDGN-----------------MHG-----------RVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp ETTSS-----------------TTS-----------CEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEEC
T ss_pred ccccc-----------------ccC-----------CCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEee
Confidence 33211 000 12367899999999999999888876667888888899999999
Q ss_pred CCCCeEEEEeCC
Q 016318 380 VLMPFVAVYDLS 391 (391)
Q Consensus 380 ~~~~~i~~~~~~ 391 (391)
..+++|.+++++
T Consensus 301 ~~~~~i~~~~~~ 312 (322)
T 2fp8_A 301 LFHGSVGILVYD 312 (322)
T ss_dssp SSCSEEEEEEC-
T ss_pred cCCCceEEEecc
Confidence 999999999874
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.97 E-value=8.2e-29 Score=234.21 Aligned_cols=277 Identities=18% Similarity=0.226 Sum_probs=199.2
Q ss_pred cccccCcceEEEccCCCeeEEEe-------------cCCEEEEEeCC----ceeEEEeecCCCcccCCCCCCcccccccc
Q 016318 65 LNQIQGPESMAFDPLGRGPYTGV-------------ADGRILFWDGL----KWTDFAFTSNNRSELCNPKPIATSYLKNE 127 (391)
Q Consensus 65 ~~~~~gPe~i~~d~~G~~ly~~~-------------~~g~I~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (391)
++...|||+|+++++|. +|+++ .+|+|++++.+ +.+.+..... ...
T Consensus 46 ~~~~~G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~----------------~~~ 108 (355)
T 3sre_A 46 KGIDNGSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGN----------------TLD 108 (355)
T ss_dssp TTCCSCCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECS----------------SCC
T ss_pred CCCCCCcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCC----------------CCC
Confidence 34347999999999886 78886 68999999976 2333322110 011
Q ss_pred CccCccceEEEecC-CC--cEEEEECCCC-----eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcc
Q 016318 128 HICGRPLGLRFDKK-TG--DLYIADAYFG-----LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNY 199 (391)
Q Consensus 128 ~~~g~P~gi~~d~~-~g--~L~V~d~~~g-----l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~ 199 (391)
....+|+||.+..+ ++ +|||+++..+ |++++++++..+ +....++.+++.||+++++++|.+|+++... +
T Consensus 109 ~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~-~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-f 186 (355)
T 3sre_A 109 ISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLL-HLKTIRHKLLPSVNDIVAVGPEHFYATNDHY-F 186 (355)
T ss_dssp GGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEE-EEEEECCTTCSSEEEEEEEETTEEEEEESCS-C
T ss_pred cCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEE-EEeccccCCCCCCceEEEeCCCCEEecCCcE-e
Confidence 12479999998652 34 5999998753 899999876544 4455667789999999999999999998531 1
Q ss_pred cchh-heeeecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccc-cCccceeecc
Q 016318 200 QRRN-FMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGE-KAGNLEAFAI 277 (391)
Q Consensus 200 ~~~~-~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~-~~g~~~~~~~ 277 (391)
.... ...+.+++.+.|+|++||+. +++++.+++.+||||+++||++++||+|+..++|++|+++++ +.+..++| .
T Consensus 187 td~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~ 263 (355)
T 3sre_A 187 IDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-S 263 (355)
T ss_dssp SSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-E
T ss_pred CCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-e
Confidence 1100 01122345678999999984 677888899999999999999999999999999999998743 23444566 6
Q ss_pred cCCCCCceEeCC-CCCEEEEEcCC-CchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEEC----CCCCEE
Q 016318 278 LPGYPDNVRTNE-KGEFWVAIHCR-RSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYS----PEGKIL 351 (391)
Q Consensus 278 ~~g~p~~i~~d~-~G~lwva~~~~-~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d----~~g~~~ 351 (391)
+++.||||++|+ +|++|+|.... ..+.. -.|.. .....+.++. .++++.
T Consensus 264 ~~g~PDGi~vD~e~G~lwva~~~~g~~v~~----~~P~~---------------------~~~s~v~rI~~~~~~~~~v~ 318 (355)
T 3sre_A 264 FDTLVDNISVDPVTGDLWVGCHPNGMRIFF----YDAEN---------------------PPGSEVLRIQDILSEEPKVT 318 (355)
T ss_dssp CSSEEEEEEECTTTCCEEEEEESCHHHHHS----CCTTS---------------------CCCEEEEEEECTTSSSCEEE
T ss_pred CCCCCceEEEeCCCCcEEEEecCCceEEEE----ECCCC---------------------CCCCEEEEEEccCCCCcEEE
Confidence 789999999999 59999976533 22211 12210 0012344443 467788
Q ss_pred EEEeCCCCCeeeceeEEEEECCEEEEecCCCCeEEEEeC
Q 016318 352 QVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 390 (391)
Q Consensus 352 ~~~~~~~g~~~~~is~~~~~~g~Lylgs~~~~~i~~~~~ 390 (391)
..|.+ +|+.+...|.+.+.+|+||+||+..+ +-.|+|
T Consensus 319 ~v~~d-dG~~l~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 319 VVYAE-NGTVLQGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp EEEEE-CSSSCCSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred EEEEc-CCCEEEeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 88887 89999999999999999999999998 555654
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.94 E-value=2.6e-24 Score=200.66 Aligned_cols=259 Identities=17% Similarity=0.199 Sum_probs=189.9
Q ss_pred ccceeccccccCcceEEEccCCC-eeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceE
Q 016318 59 NSEIKFLNQIQGPESMAFDPLGR-GPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGL 136 (391)
Q Consensus 59 ~~~~~~~~~~~gPe~i~~d~~G~-~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi 136 (391)
+.+.+..+ +..+|+.+++++|+ ++|++..+++|++++.+ ....+.. ..+.|.++
T Consensus 36 ~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~-----------------------~~~~~~gl 91 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLD-----------------------ATAFTNGN 91 (305)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEE-----------------------SCSCEEEE
T ss_pred ceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeC-----------------------CCCcccee
Confidence 34555444 67899999999998 78899999999999876 4443322 13568999
Q ss_pred EEecCCCcEEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 137 RFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 137 ~~d~~~g~L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
++++ +|+||+++.. .+|.+++++ ++++.+.....+.++..|++++++++|++|++|+.................+.+
T Consensus 92 ~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 92 AVDA-QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp EECT-TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred eECC-CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC
Confidence 9998 7899999977 569999997 667776655556667789999999999999998531100000000001112357
Q ss_pred eEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCC-----CeEEEEEeccccCccceeecc-cCCCCCceEeCC
Q 016318 216 RVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV-----GRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNE 289 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~-----~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~ 289 (391)
+|+++|+++++++.+. .+..|||++++||++.||++++.. ++|+++++++......+.+.. .++.|++|++|+
T Consensus 170 ~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~ 248 (305)
T 3dr2_A 170 SVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR 248 (305)
T ss_dssp EEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT
T ss_pred eEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC
Confidence 8999999888887777 778999999999999999999863 799999987643333445544 357899999999
Q ss_pred CCCEEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEE
Q 016318 290 KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVE 369 (391)
Q Consensus 290 ~G~lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~ 369 (391)
+|++|++... .|.+++++|+.+..+..+.+ ++.+.
T Consensus 249 ~G~lwv~~~~----------------------------------------gv~~~~~~g~~~~~~~~~~~-----~~~~~ 283 (305)
T 3dr2_A 249 GGWLWSSSGT----------------------------------------GVCVFDSDGQLLGHIPTPGT-----ASNCT 283 (305)
T ss_dssp TSCEEECCSS----------------------------------------EEEEECTTSCEEEEEECSSC-----CCEEE
T ss_pred CCCEEEecCC----------------------------------------cEEEECCCCCEEEEEECCCc-----eeEEE
Confidence 9999998622 27779999998888876542 33333
Q ss_pred E--ECCEEEEecCCCCeEEEEeCC
Q 016318 370 E--KDGKLWMGSVLMPFVAVYDLS 391 (391)
Q Consensus 370 ~--~~g~Lylgs~~~~~i~~~~~~ 391 (391)
. +++.||+++. ..+.+++++
T Consensus 284 f~~d~~~L~it~~--~~l~~~~~~ 305 (305)
T 3dr2_A 284 FDQAQQRLFITGG--PCLWMLPLP 305 (305)
T ss_dssp ECTTSCEEEEEET--TEEEEEECC
T ss_pred EeCCCCEEEEEcC--CeEEEEECC
Confidence 3 3468999986 467777653
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.93 E-value=4.2e-23 Score=191.15 Aligned_cols=251 Identities=18% Similarity=0.224 Sum_probs=183.6
Q ss_pred cccCcceEEEccCCC-eeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 67 QIQGPESMAFDPLGR-GPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~-~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
....||+++++++|+ ++|+++.+++|++++++ ....+.. ..+.|.++++++ +|+
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~l~~~~-dg~ 81 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMH-----------------------PSHHQNGHCLNK-QGH 81 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEES-----------------------SCSSEEEEEECT-TCC
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEEC-----------------------CCCCcceeeECC-CCc
Confidence 467899999999998 88999999999999987 4222211 146689999998 899
Q ss_pred EEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 145 LYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 145 L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
|||++.. .+|+++|+++++++.+.....+.+...+++++++++|++|++++...................++|+++++.
T Consensus 82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 82 LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 9999976 569999998888777654444455678999999999999999853100000000000011235689999998
Q ss_pred CCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccc-cC-ccceeecccCCCCCceEeCCCCCEEEEEcCCC
Q 016318 224 TKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGE-KA-GNLEAFAILPGYPDNVRTNEKGEFWVAIHCRR 301 (391)
Q Consensus 224 ~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~-~~-g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~ 301 (391)
++...+...+..|++++++||++.+ ++++..++|+++++++. +. ...+.+....+.|++|++|++|++|++. .
T Consensus 162 -g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~-- 236 (296)
T 3e5z_A 162 -GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-G-- 236 (296)
T ss_dssp -SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-T--
T ss_pred -CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-C--
Confidence 7777777888899999999999977 99998899999998632 11 2234442235689999999999999998 3
Q ss_pred chhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEE--EC-CEEEEe
Q 016318 302 SLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEE--KD-GKLWMG 378 (391)
Q Consensus 302 ~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~--~~-g~Lylg 378 (391)
+.+.+++++|+.+..+..+.+ ++.+.. .+ +.||++
T Consensus 237 -------------------------------------~~v~~~~~~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~ 274 (296)
T 3e5z_A 237 -------------------------------------DGVHVLTPDGDELGRVLTPQT-----TSNLCFGGPEGRTLYMT 274 (296)
T ss_dssp -------------------------------------TEEEEECTTSCEEEEEECSSC-----CCEEEEESTTSCEEEEE
T ss_pred -------------------------------------CeEEEECCCCCEEEEEECCCC-----ceeEEEECCCCCEEEEE
Confidence 237778999998888876554 333433 23 589999
Q ss_pred cCCCCeEEEEeC
Q 016318 379 SVLMPFVAVYDL 390 (391)
Q Consensus 379 s~~~~~i~~~~~ 390 (391)
+. ..+.++++
T Consensus 275 t~--~~l~~~~~ 284 (296)
T 3e5z_A 275 VS--TEFWSIET 284 (296)
T ss_dssp ET--TEEEEEEC
T ss_pred cC--CeEEEEEc
Confidence 85 46777764
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.92 E-value=1.4e-22 Score=188.33 Aligned_cols=208 Identities=14% Similarity=0.181 Sum_probs=155.4
Q ss_pred cceeccccccCcceEEEccC-CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceE
Q 016318 60 SEIKFLNQIQGPESMAFDPL-GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGL 136 (391)
Q Consensus 60 ~~~~~~~~~~gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi 136 (391)
++.+.......+|+.+++++ +.++|++..+++|++++++ ....+. ....|.++
T Consensus 4 ~~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~------------------------~~~~~~~i 59 (297)
T 3g4e_A 4 IECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT------------------------MDAPVSSV 59 (297)
T ss_dssp EEEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE------------------------CSSCEEEE
T ss_pred EEEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe------------------------CCCceEEE
Confidence 34444556778999999984 6678888889999999987 222221 12568899
Q ss_pred EEecCCCcEEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCce
Q 016318 137 RFDKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGR 216 (391)
Q Consensus 137 ~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~ 216 (391)
++++ +|+|||+. ..+|+++|+++++++.+.....+.+...++++++|++|++|+++...... ........++
T Consensus 60 ~~~~-dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~~~~~~~~~~ 131 (297)
T 3g4e_A 60 ALRQ-SGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------PAVLERHQGA 131 (297)
T ss_dssp EEBT-TSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------TTBCCTTCEE
T ss_pred EECC-CCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------cccccCCCcE
Confidence 9998 78899997 56899999999988877655444456789999999999999998431100 0001134578
Q ss_pred EEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc--ccCccceeeccc---CCCCCceEeCCCC
Q 016318 217 VLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG--EKAGNLEAFAIL---PGYPDNVRTNEKG 291 (391)
Q Consensus 217 l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g--~~~g~~~~~~~~---~g~p~~i~~d~~G 291 (391)
|++++++ ++...+...+..|||++++||++.+|++++..++|++++++. ......+.+.++ ++.|++|++|++|
T Consensus 132 l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 132 LYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp EEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred EEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 9999986 566666677789999999999999999999999999998742 122223445443 4689999999999
Q ss_pred CEEEEEcCC
Q 016318 292 EFWVAIHCR 300 (391)
Q Consensus 292 ~lwva~~~~ 300 (391)
++|++....
T Consensus 211 ~lwva~~~~ 219 (297)
T 3g4e_A 211 KLWVACYNG 219 (297)
T ss_dssp CEEEEEETT
T ss_pred CEEEEEcCC
Confidence 999998764
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.91 E-value=4.6e-22 Score=184.90 Aligned_cols=261 Identities=22% Similarity=0.307 Sum_probs=178.7
Q ss_pred cccccCcceEEEccCCCeeEE-------EecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccce
Q 016318 65 LNQIQGPESMAFDPLGRGPYT-------GVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLG 135 (391)
Q Consensus 65 ~~~~~gPe~i~~d~~G~~ly~-------~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~g 135 (391)
.+.+..||+++++++|+++++ ++.+++|.+++.. ++..+... ........|.+
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~------------------~~~~~~~~~~~ 75 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKP------------------EVNGYGGIPAG 75 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECC------------------EETTEECCEEE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEec------------------ccCCCCCCCce
Confidence 345789999999999984444 4778999999865 44433210 00012467999
Q ss_pred EEEecCC-CcEEEEECCCCeEEEeCCCCeeEEc-eeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCC
Q 016318 136 LRFDKKT-GDLYIADAYFGLMKVGPEGGLATSL-ATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 136 i~~d~~~-g~L~V~d~~~gl~~~d~~~g~~~~~-~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
+++++ + |+|||++...+|+++|++ ++++.+ .....+.+...+++++++++|++|+++........++ .......
T Consensus 76 i~~~~-~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~--~~~~~~~ 151 (314)
T 1pjx_A 76 CQCDR-DANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY--TRSMQEK 151 (314)
T ss_dssp EEECS-SSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC--CBTTSSS
T ss_pred EEEec-CCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccc--cccccCC
Confidence 99998 6 899999987799999999 777665 4433334456799999999999999985421000000 0011223
Q ss_pred CceEEEEeCCCCeEEEeccCCCCcceEEEc----cCCCEEEEEeCCCCeEEEEEeccc-cCccceeecccC----CCCCc
Q 016318 214 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLS----KDKSFFVFCEGSVGRLHKYWLIGE-KAGNLEAFAILP----GYPDN 284 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~~~~~~~ngia~~----~d~~~l~v~et~~~~I~~~~~~g~-~~g~~~~~~~~~----g~p~~ 284 (391)
.++|++++++ ++...+......|++++++ +|++.+|++++.+++|++++.++. +....+.+..++ +.|++
T Consensus 152 ~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 230 (314)
T 1pjx_A 152 FGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADG 230 (314)
T ss_dssp CEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEE
T ss_pred CCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCc
Confidence 4789999987 7776666667789999999 999889999988899999987621 112223444443 56899
Q ss_pred eEeCCCCCEEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCC-CCEEEEEeCCCCCeee
Q 016318 285 VRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPE-GKILQVLEDSKGKVVK 363 (391)
Q Consensus 285 i~~d~~G~lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~g~~~~ 363 (391)
|++|++|++|++.... +.+.++|++ |+.+..+..+. .
T Consensus 231 i~~d~~G~l~v~~~~~--------------------------------------~~i~~~d~~~g~~~~~~~~~~----~ 268 (314)
T 1pjx_A 231 MDFDEDNNLLVANWGS--------------------------------------SHIEVFGPDGGQPKMRIRCPF----E 268 (314)
T ss_dssp EEEBTTCCEEEEEETT--------------------------------------TEEEEECTTCBSCSEEEECSS----S
T ss_pred eEECCCCCEEEEEcCC--------------------------------------CEEEEEcCCCCcEeEEEeCCC----C
Confidence 9999999999997653 235667776 66555554332 1
Q ss_pred ceeEEEE-ECCE-EEEecCCCCeEEEEeC
Q 016318 364 AISEVEE-KDGK-LWMGSVLMPFVAVYDL 390 (391)
Q Consensus 364 ~is~~~~-~~g~-Lylgs~~~~~i~~~~~ 390 (391)
.++.+.. .+|+ ||+++..+..|.++++
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 2344444 2344 8888877778887765
No 7
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.89 E-value=1.6e-20 Score=175.23 Aligned_cols=187 Identities=20% Similarity=0.170 Sum_probs=142.6
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
..||+++++++|++++++..+++|++++++ ....+.. ..++|.||++++ +|+|||
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-----------------------~~~~p~gia~~~-dG~l~v 87 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-----------------------VEGKVSGLAFTS-NGDLVA 87 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-----------------------CSSEEEEEEECT-TSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-----------------------CCCCceeEEEcC-CCcEEE
Confidence 689999999999966666688999999887 3332211 135799999998 788999
Q ss_pred EECCC-C--eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 148 ADAYF-G--LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 148 ~d~~~-g--l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
++... + |+++++.+++++.+.... ...++++++..+++++|++++. +|+|+++|+.+
T Consensus 88 ad~~~~~~~v~~~d~~~g~~~~~~~~~---~~~~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~ 147 (306)
T 2p4o_A 88 TGWNADSIPVVSLVKSDGTVETLLTLP---DAIFLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQ 147 (306)
T ss_dssp EEECTTSCEEEEEECTTSCEEEEEECT---TCSCEEEEEESSSSEEEEEETT-----------------TTEEEEEETTT
T ss_pred EeccCCcceEEEEcCCCCeEEEEEeCC---CccccCcccccCCCcEEEEECC-----------------CCeEEEEeCCC
Confidence 99753 4 999998888877665432 2356788888888889999854 47999999987
Q ss_pred CeEEEe-----------ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc-ccCccceeecccCCCCCceEeCCCCC
Q 016318 225 KQTTVL-----------LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG-EKAGNLEAFAILPGYPDNVRTNEKGE 292 (391)
Q Consensus 225 ~~~~~~-----------~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g-~~~g~~~~~~~~~g~p~~i~~d~~G~ 292 (391)
++.++. ...+..|||| ++|++++||+++.+++|++|++++ .+.+..+.+... ..|++|++|++|+
T Consensus 148 ~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~ 224 (306)
T 2p4o_A 148 PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGN 224 (306)
T ss_dssp TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCC
T ss_pred CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCC
Confidence 643332 1345689998 889999999999999999999875 233444555543 4799999999999
Q ss_pred EEEEEcCCCc
Q 016318 293 FWVAIHCRRS 302 (391)
Q Consensus 293 lwva~~~~~~ 302 (391)
+||+......
T Consensus 225 l~va~~~~~~ 234 (306)
T 2p4o_A 225 LYGATHIYNS 234 (306)
T ss_dssp EEEECBTTCC
T ss_pred EEEEeCCCCe
Confidence 9999876533
No 8
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.87 E-value=1.8e-19 Score=169.61 Aligned_cols=203 Identities=19% Similarity=0.185 Sum_probs=151.1
Q ss_pred ccceeccccccCcceEEEccC-CCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCcccCCCCCCccccccccCccCccce
Q 016318 59 NSEIKFLNQIQGPESMAFDPL-GRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLG 135 (391)
Q Consensus 59 ~~~~~~~~~~~gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~g 135 (391)
+++.+.......+|+++++++ +.++|++..+++|++++.+ . ...+. . ...|.+
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~-----------------------~~~v~~ 94 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-L-----------------------PFMGSA 94 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-C-----------------------SSCEEE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-C-----------------------CCcceE
Confidence 456666666778999999986 5677888889999999886 2 22221 0 245788
Q ss_pred EEEecCCCcEEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 136 LRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 136 i~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
+++++ +|++||++ ..+|+++|+++++++.+.....+.+...++++++|++|++|+++.... +....+
T Consensus 95 i~~~~-dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~ 161 (326)
T 2ghs_A 95 LAKIS-DSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAG 161 (326)
T ss_dssp EEEEE-TTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCE
T ss_pred EEEeC-CCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCce
Confidence 99998 79999997 567999999988877664432233345789999999999999874210 012357
Q ss_pred eEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEec--cc-cCccceeecc---cCCCCCceEeCC
Q 016318 216 RVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI--GE-KAGNLEAFAI---LPGYPDNVRTNE 289 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~--g~-~~g~~~~~~~---~~g~p~~i~~d~ 289 (391)
+|++++ +++.+.+......++++++++|++.+|++++..++|++++++ +. .....+.+.. ..+.|+++++|+
T Consensus 162 ~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~ 239 (326)
T 2ghs_A 162 SIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA 239 (326)
T ss_dssp EEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT
T ss_pred EEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC
Confidence 899999 577777666667899999999999999999888999999975 22 2222334433 246799999999
Q ss_pred CCCEEEEEcCC
Q 016318 290 KGEFWVAIHCR 300 (391)
Q Consensus 290 ~G~lwva~~~~ 300 (391)
+|++|++....
T Consensus 240 ~G~lwva~~~~ 250 (326)
T 2ghs_A 240 EGHIWNARWGE 250 (326)
T ss_dssp TSCEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 99999998653
No 9
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.87 E-value=2.5e-19 Score=164.64 Aligned_cols=244 Identities=16% Similarity=0.282 Sum_probs=171.2
Q ss_pred cccccCcceEEEccCCCeeEEEecCCEEEEEeCC-ce-eEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-KW-TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 65 ~~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
.+++..|.+++++++|++++++..+++|.+++.+ .. ..+.... ........|.+++++..+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~-----------------~~~~~~~~p~~i~~~~~~ 88 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECG-----------------KRDSQLLYPNRVAVVRNS 88 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBS-----------------SSTTCBSSEEEEEEETTT
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccC-----------------CCcccccCceEEEEEcCC
Confidence 4668899999999999955555778999999877 22 2221100 001124579999995338
Q ss_pred CcEEEEEC--CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 143 GDLYIADA--YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 143 g~L~V~d~--~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
++|||++. ...|.++|.++..++.+.. .....|++++++++|++|+++.. +++|++|
T Consensus 89 g~l~v~~~~~~~~i~~~d~~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~ 147 (286)
T 1q7f_A 89 GDIIVTERSPTHQIQIYNQYGQFVRKFGA----TILQHPRGVTVDNKGRIIVVECK-----------------VMRVIIF 147 (286)
T ss_dssp TEEEEEECGGGCEEEEECTTSCEEEEECT----TTCSCEEEEEECTTSCEEEEETT-----------------TTEEEEE
T ss_pred CeEEEEcCCCCCEEEEECCCCcEEEEecC----ccCCCceEEEEeCCCCEEEEECC-----------------CCEEEEE
Confidence 99999996 3569999976654444421 23457899999999999999854 4789999
Q ss_pred eCCCCeEEEec--cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc--CCCCCceEeCCCCCEEEE
Q 016318 221 DPTTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL--PGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 221 d~~~~~~~~~~--~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~--~g~p~~i~~d~~G~lwva 296 (391)
|+++.....+. ..+..|++|+++++|+ +|+++..+++|++++.+|. ....+... ...|.+|++|++|++|++
T Consensus 148 ~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~ 223 (286)
T 1q7f_A 148 DQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIA 223 (286)
T ss_dssp CTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEE
T ss_pred cCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEE
Confidence 98766555553 3456899999999998 9999988899999987653 12223211 146899999999999999
Q ss_pred EcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEE-ECCEE
Q 016318 297 IHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEE-KDGKL 375 (391)
Q Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~-~~g~L 375 (391)
..... ..+..++++|+.+..+....+. ..+..+.. .+|+|
T Consensus 224 ~~~~~-------------------------------------~~i~~~~~~g~~~~~~~~~~~~--~~~~~i~~~~~g~l 264 (286)
T 1q7f_A 224 DNHNN-------------------------------------FNLTIFTQDGQLISALESKVKH--AQCFDVALMDDGSV 264 (286)
T ss_dssp ECSSS-------------------------------------CEEEEECTTSCEEEEEEESSCC--SCEEEEEEETTTEE
T ss_pred eCCCC-------------------------------------EEEEEECCCCCEEEEEcccCCC--CcceeEEECCCCcE
Confidence 76531 1466788888887777543221 12334444 46899
Q ss_pred EEecCCCCeEEEEeC
Q 016318 376 WMGSVLMPFVAVYDL 390 (391)
Q Consensus 376 ylgs~~~~~i~~~~~ 390 (391)
|+++. ...|.++++
T Consensus 265 ~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 265 VLASK-DYRLYIYRY 278 (286)
T ss_dssp EEEET-TTEEEEEEC
T ss_pred EEECC-CCeEEEEEc
Confidence 99974 678887764
No 10
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.86 E-value=1.1e-19 Score=170.61 Aligned_cols=199 Identities=20% Similarity=0.284 Sum_probs=146.3
Q ss_pred ccccCcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
+....||+++++++|+++++++.+++|++++.+ .+..+... ....|.++++++ +|
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~----------------------~~~~~~~i~~~~-dg 98 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS----------------------HKANPAAIKIHK-DG 98 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC----------------------SSSSEEEEEECT-TS
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC----------------------CCCCcceEEECC-CC
Confidence 345689999999999955678888999999876 33332211 135689999998 78
Q ss_pred cEEEEECCC-----CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEE
Q 016318 144 DLYIADAYF-----GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVL 218 (391)
Q Consensus 144 ~L~V~d~~~-----gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~ 218 (391)
+|||++... +|+++|++++..+.+.... .....+++++++++|++|+++.... .....++|+
T Consensus 99 ~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~ 165 (333)
T 2dg1_A 99 RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVY 165 (333)
T ss_dssp CEEEEECTTSSSCCEEEEECTTSCSCEEEECSS--SSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEE
T ss_pred cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC--ccCCcccceEECCCCCEEEEecccc-----------ccCCCceEE
Confidence 999998765 6999999988776443211 1235789999999999999985310 112357899
Q ss_pred EEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc--ccCccc--eeecccC--CCCCceEeCCCCC
Q 016318 219 KYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG--EKAGNL--EAFAILP--GYPDNVRTNEKGE 292 (391)
Q Consensus 219 ~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g--~~~g~~--~~~~~~~--g~p~~i~~d~~G~ 292 (391)
++|+++++.+.+......++++++++|++.+|++++..++|++++++. ...... +.+...+ ..|++|++|++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~ 245 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN 245 (333)
T ss_dssp EECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC
T ss_pred EEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC
Confidence 999988887776666678999999999999999988788999999853 111110 1222233 3789999999999
Q ss_pred EEEEEcCC
Q 016318 293 FWVAIHCR 300 (391)
Q Consensus 293 lwva~~~~ 300 (391)
+|++....
T Consensus 246 l~v~~~~~ 253 (333)
T 2dg1_A 246 LYVAMYGQ 253 (333)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 99998653
No 11
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.85 E-value=3.3e-19 Score=174.33 Aligned_cols=242 Identities=13% Similarity=0.106 Sum_probs=169.2
Q ss_pred ccccCcceEEEccC---CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec
Q 016318 66 NQIQGPESMAFDPL---GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (391)
Q Consensus 66 ~~~~gPe~i~~d~~---G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~ 140 (391)
+++..|++|++|++ |+ ||++...++|.++++. .+..+.. ...+|.++++++
T Consensus 136 ~~~~~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~~~~-----------------------~~~~P~giavd~ 191 (433)
T 4hw6_A 136 GAFDNIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDIKTT-----------------------NIGQCADVNFTL 191 (433)
T ss_dssp CCCSCCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEEECC-----------------------CCSCEEEEEECT
T ss_pred cccCCCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEEeec-----------------------CCCCccEEEECC
Confidence 36889999999984 76 6666555899999985 3333311 246799999999
Q ss_pred CCCcEEEEECC-----CCeEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCC
Q 016318 141 KTGDLYIADAY-----FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 141 ~~g~L~V~d~~-----~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
+|+|||+|.. .+++.++..++..... .. ..+..|+++++++ +|+||+++.. +
T Consensus 192 -dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~--~~--~~~~~P~giavd~~~G~lyv~d~~-----------------~ 249 (433)
T 4hw6_A 192 -NGDMVVVDDQSSDTNTGIYLFTRASGFTERL--SL--CNARGAKTCAVHPQNGKIYYTRYH-----------------H 249 (433)
T ss_dssp -TCCEEEEECCSCTTSEEEEEECGGGTTCCEE--EE--EECSSBCCCEECTTTCCEEECBTT-----------------C
T ss_pred -CCCEEEEcCCCCcccceEEEEECCCCeeccc--cc--cccCCCCEEEEeCCCCeEEEEECC-----------------C
Confidence 6779999974 3577777654432110 00 1356899999999 8999999964 5
Q ss_pred ceEEEEeCCCCeE-EEecc--CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecccc--Cccceeeccc---C-------
Q 016318 215 GRVLKYDPTTKQT-TVLLR--NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK--AGNLEAFAIL---P------- 279 (391)
Q Consensus 215 g~l~~~d~~~~~~-~~~~~--~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~--~g~~~~~~~~---~------- 279 (391)
++|+++|+++++. +.+.. ....+++|+++|++++|||+++.+++|++++.++.. ......++.. .
T Consensus 250 ~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~ 329 (433)
T 4hw6_A 250 AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMG 329 (433)
T ss_dssp SEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEG
T ss_pred CEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcc
Confidence 7999999987876 44322 233566899999999999999999999999876421 1111222211 1
Q ss_pred -----CCCCceEe---------CCCCCEEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEEC
Q 016318 280 -----GYPDNVRT---------NEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYS 345 (391)
Q Consensus 280 -----g~p~~i~~---------d~~G~lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d 345 (391)
..|.+|++ |.+|++||+....+ .|.+++
T Consensus 330 ~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~--------------------------------------~I~~~~ 371 (433)
T 4hw6_A 330 TGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH--------------------------------------TVRVLT 371 (433)
T ss_dssp GGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT--------------------------------------EEEEEC
T ss_pred cceEEcCCccEEEEccccccccCCCCcEEEEECCCC--------------------------------------EEEEEC
Confidence 24778999 99999999987653 355567
Q ss_pred CCCCEEEEEeCC--------CC-----CeeeceeEEEEE--CCEEEEecCCCCeEEEEeCC
Q 016318 346 PEGKILQVLEDS--------KG-----KVVKAISEVEEK--DGKLWMGSVLMPFVAVYDLS 391 (391)
Q Consensus 346 ~~g~~~~~~~~~--------~g-----~~~~~is~~~~~--~g~Lylgs~~~~~i~~~~~~ 391 (391)
++|.+....... +| ..+.....+..+ +|+||++...+++|.++.++
T Consensus 372 ~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 PEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 777544443221 11 124445667666 69999999999999999764
No 12
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.85 E-value=2.8e-19 Score=162.51 Aligned_cols=234 Identities=21% Similarity=0.246 Sum_probs=164.0
Q ss_pred CcceEEEccCCCeeEE-E-ecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 70 GPESMAFDPLGRGPYT-G-VADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~-~-~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
.|++|+++++|+ +|+ + ..+++|.+++........ . .......|.+|++++ +|+|||
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~-~-------------------~~~~~~~p~~i~~~~-~g~l~v 82 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTV-L-------------------PFNGLYQPQGLAVDG-AGTVYV 82 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EE-C-------------------CCCSCCSCCCEEECT-TCCEEE
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccce-E-------------------eeCCcCCcceeEECC-CCCEEE
Confidence 999999999999 666 5 677899999876211110 0 001135799999998 788999
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
++...+|+++|++++....+.. .....|++++++++|++|+++.. +++|++++..+...
T Consensus 83 ~~~~~~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 83 TDFNNRVVTLAAGSNNQTVLPF----DGLNYPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQ 141 (270)
T ss_dssp EETTTEEEEECTTCSCCEECCC----CSCSSEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSC
T ss_pred EcCCCEEEEEeCCCceEeeeec----CCcCCCcceEECCCCCEEEEECC-----------------CCEEEEEECCCcee
Confidence 9985569999998876554321 12357899999999999999854 46899998766544
Q ss_pred EEe-ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCCCCceEeCCCCCEEEEEcCCCchhh
Q 016318 228 TVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCRRSLYS 305 (391)
Q Consensus 228 ~~~-~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~~d~~G~lwva~~~~~~~~~ 305 (391)
... ...+..|++++++++++ +|+++..+++|.+++.++.. ..... .....|.+|++|++|++|++.....
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~---- 213 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDEAGTVYVTEHNTN---- 213 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECTTCCEEEEETTTS----
T ss_pred EeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCc---eEeecccCCCCceEEEECCCCCEEEEECCCC----
Confidence 333 24456899999999998 99998888899999866532 11111 1114688999999999999986542
Q ss_pred hhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEEE-CCEEEEecCCCCe
Q 016318 306 HLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEK-DGKLWMGSVLMPF 384 (391)
Q Consensus 306 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~~-~g~Lylgs~~~~~ 384 (391)
.+.+++++++....... .+ ...+..+..+ +|+||+++..+..
T Consensus 214 ----------------------------------~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~ 256 (270)
T 1rwi_B 214 ----------------------------------QVVKLLAGSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDR 256 (270)
T ss_dssp ----------------------------------CEEEECTTCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTE
T ss_pred ----------------------------------cEEEEcCCCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCE
Confidence 25567777664433211 22 1234556554 4889999999999
Q ss_pred EEEEeCC
Q 016318 385 VAVYDLS 391 (391)
Q Consensus 385 i~~~~~~ 391 (391)
|.+++++
T Consensus 257 v~~~~~~ 263 (270)
T 1rwi_B 257 VVKLTSL 263 (270)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998764
No 13
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.83 E-value=2.9e-18 Score=166.51 Aligned_cols=241 Identities=16% Similarity=0.113 Sum_probs=166.4
Q ss_pred ccccCcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
.++..|.+|++|++|++++++..+++|.+++.+ ....+... ...|. ++++++++
T Consensus 128 a~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-----------------------~~~~~-ia~~~~g~ 183 (409)
T 3hrp_A 128 AKFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-----------------------FKGGK-PAVTKDKQ 183 (409)
T ss_dssp CCCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-----------------------CCBCB-CEECTTSS
T ss_pred cccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-----------------------CCCCc-eeEecCCC
Confidence 357899999999999966666777999999987 33333211 23466 88998555
Q ss_pred cEEEEECCC--CeEEEeCCCCee-EEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 144 DLYIADAYF--GLMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 144 ~L~V~d~~~--gl~~~d~~~g~~-~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
.||+++... .|+++++.++.. +.+. .........|+++++++ +|+||+++. +++|++
T Consensus 184 ~l~~~d~~~~~~I~~~d~~~~~~~~~~g-~~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~ 244 (409)
T 3hrp_A 184 RVYSIGWEGTHTVYVYMKASGWAPTRIG-QLGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGR 244 (409)
T ss_dssp EEEEEBSSTTCEEEEEEGGGTTCEEEEE-ECCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEE
T ss_pred cEEEEecCCCceEEEEEcCCCceeEEee-eccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEE
Confidence 689998754 599999887643 2221 11111346799999999 789999763 378999
Q ss_pred EeCCCCeEEEe----ccCCC--Ccc-eEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc--------------
Q 016318 220 YDPTTKQTTVL----LRNLQ--FPN-GLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL-------------- 278 (391)
Q Consensus 220 ~d~~~~~~~~~----~~~~~--~~n-gia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~-------------- 278 (391)
||++++....+ ..+.. .|. +++++|++..||+++..+++|++++.+|. ...+...
T Consensus 245 ~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~ 320 (409)
T 3hrp_A 245 FNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEA 320 (409)
T ss_dssp EETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGC
T ss_pred EECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCccccc
Confidence 99998876665 22222 244 99999976679999999999999987653 2222211
Q ss_pred -CCCCCceEeCCCCCEEEEEc-CCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEEC-CCCCEEEEEe
Q 016318 279 -PGYPDNVRTNEKGEFWVAIH-CRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYS-PEGKILQVLE 355 (391)
Q Consensus 279 -~g~p~~i~~d~~G~lwva~~-~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d-~~g~~~~~~~ 355 (391)
-..|.+|++|++|++|++.. ..++ |.+++ ++|.+.....
T Consensus 321 ~~~~P~gia~d~dG~lyvad~~~~~~--------------------------------------I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 321 LFAQPNGMTVDEDGNFYIVDGFKGYC--------------------------------------LRKLDILDGYVSTVAG 362 (409)
T ss_dssp BCSSEEEEEECTTCCEEEEETTTTCE--------------------------------------EEEEETTTTEEEEEEE
T ss_pred EeCCCeEEEEeCCCCEEEEeCCCCCE--------------------------------------EEEEECCCCEEEEEeC
Confidence 13589999999999999987 5432 44455 4454332222
Q ss_pred C------CCC----CeeeceeEEEEEC-CEEEEecCCCCeEEEEeCC
Q 016318 356 D------SKG----KVVKAISEVEEKD-GKLWMGSVLMPFVAVYDLS 391 (391)
Q Consensus 356 ~------~~g----~~~~~is~~~~~~-g~Lylgs~~~~~i~~~~~~ 391 (391)
. .+| ..+.....+..+. |+||++...+..|.++.++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 1 011 1134456666554 9999999999999999874
No 14
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.83 E-value=1.2e-17 Score=153.42 Aligned_cols=185 Identities=16% Similarity=0.227 Sum_probs=136.8
Q ss_pred ccccCcceEEEccCCCeeEEEe-cCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 66 NQIQGPESMAFDPLGRGPYTGV-ADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~-~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
.....|++|++|++|+ +|++. .+++|.+++.+ .+..+.. ......|.++++++ +|
T Consensus 17 ~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~---------------------~~~~~~~~~i~~~~-~g 73 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGK-VWFTQHKANKISSLDQSGRIKEFEV---------------------PTPDAKVMCLIVSS-LG 73 (300)
T ss_dssp STTCCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEEC---------------------SSTTCCEEEEEECT-TS
T ss_pred CCCCCcceeeECCCCC-EEEEcCCCCeEEEECCCCceEEEEC---------------------CCCCCcceeEEECC-CC
Confidence 3467999999999999 66655 57899999887 4333221 01136799999998 78
Q ss_pred cEEEEECCC-CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 144 DLYIADAYF-GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 144 ~L~V~d~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
++||++... +|+++|++ ++.+.+.... ....|++++++++|++|+++.. .++|+++|+
T Consensus 74 ~l~v~~~~~~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~ 132 (300)
T 2qc5_A 74 DIWFTENGANKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN-----------------GDRIGKLTA 132 (300)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT-----------------TTEEEEECT
T ss_pred CEEEEecCCCeEEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC-----------------CCeEEEECC
Confidence 999999864 49999998 6555443221 1256899999999999999854 468999999
Q ss_pred CCCeEEEec--cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc--cCCCCCceEeCCCCCEEEEEc
Q 016318 223 TTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--LPGYPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 223 ~~~~~~~~~--~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~--~~g~p~~i~~d~~G~lwva~~ 298 (391)
+ ++...+. .....|++++++++++ +|+++..+++|++++.++ +...+.. ....|.+|++|++|++|++..
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITNTG----KLEEYPLPTNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECCCC----cEEEeeCCCCCCCcceEEECCCCCEEEEcc
Confidence 8 6655432 2456899999999999 999988888999998643 2222321 113588999999999999986
Q ss_pred CC
Q 016318 299 CR 300 (391)
Q Consensus 299 ~~ 300 (391)
..
T Consensus 207 ~~ 208 (300)
T 2qc5_A 207 MG 208 (300)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 15
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=3e-18 Score=167.41 Aligned_cols=241 Identities=13% Similarity=0.124 Sum_probs=169.9
Q ss_pred cccccCcceEEEcc--CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec
Q 016318 65 LNQIQGPESMAFDP--LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (391)
Q Consensus 65 ~~~~~gPe~i~~d~--~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~ 140 (391)
.+++..|++|++|+ +|+ +|+....++|.+++.+ .+..+.. ...+|.+|++++
T Consensus 133 ~~~~~~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~~-----------------------~~~~P~~ia~d~ 188 (430)
T 3tc9_A 133 CGGFGGAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVYS-----------------------GLSKVRTICWTH 188 (430)
T ss_dssp CBCCSCCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEEC-----------------------CCSCEEEEEECT
T ss_pred ccCCCCCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEec-----------------------CCCCcceEEEeC
Confidence 34688999999996 466 7776666899999887 3333321 256799999998
Q ss_pred CCCc-EEEEECCC-----CeEEEeCCCCee--EEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeeccc
Q 016318 141 KTGD-LYIADAYF-----GLMKVGPEGGLA--TSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSA 211 (391)
Q Consensus 141 ~~g~-L~V~d~~~-----gl~~~d~~~g~~--~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~ 211 (391)
+++ |||++... .++.++.+++.. +.+. .+..|+++++++ +|+||+++..
T Consensus 189 -~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~--------------- 246 (430)
T 3tc9_A 189 -EADSMIITNDQNNNDRPNNYILTRESGFKVITELT------KGQNCNGAETHPINGELYFNSWN--------------- 246 (430)
T ss_dssp -TSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE------ECSSCCCEEECTTTCCEEEEETT---------------
T ss_pred -CCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec------cCCCceEEEEeCCCCEEEEEECC---------------
Confidence 565 99999743 367777765432 1221 256799999999 8999999965
Q ss_pred CCCceEEEEeCCCCeEEEec--cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecccc--Cccceeeccc---C-----
Q 016318 212 EDTGRVLKYDPTTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK--AGNLEAFAIL---P----- 279 (391)
Q Consensus 212 ~~~g~l~~~d~~~~~~~~~~--~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~--~g~~~~~~~~---~----- 279 (391)
+++|++|++++++...+. .....|++|+++|++++|||++..+++|++++.++.. ......+... .
T Consensus 247 --~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg 324 (430)
T 3tc9_A 247 --AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDG 324 (430)
T ss_dssp --TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCE
T ss_pred --CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCC
Confidence 579999999988764332 2345799999999999999999999999999887631 1111222211 0
Q ss_pred -------CCCC-ceEe--------CCCCCEEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEE
Q 016318 280 -------GYPD-NVRT--------NEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVK 343 (391)
Q Consensus 280 -------g~p~-~i~~--------d~~G~lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~ 343 (391)
..|. ++++ |++|++|++....+ .|.+
T Consensus 325 ~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~--------------------------------------~I~~ 366 (430)
T 3tc9_A 325 VGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENH--------------------------------------CIRI 366 (430)
T ss_dssp EGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGT--------------------------------------EEEE
T ss_pred CCcceEeCCCcceEEEccccccccCCCCeEEEEECCCc--------------------------------------EEEE
Confidence 2366 6777 56799999987642 3566
Q ss_pred ECCCCCEEEEEeCC--------CC-----CeeeceeEEEEE--CCEEEEecCCCCeEEEEeCC
Q 016318 344 YSPEGKILQVLEDS--------KG-----KVVKAISEVEEK--DGKLWMGSVLMPFVAVYDLS 391 (391)
Q Consensus 344 ~d~~g~~~~~~~~~--------~g-----~~~~~is~~~~~--~g~Lylgs~~~~~i~~~~~~ 391 (391)
++++|++....... +| ..+.....+..+ +|+||++...++.|.++.++
T Consensus 367 i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 367 LTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp ECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 77788655554331 22 123455666665 59999999999999998764
No 16
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=1.9e-18 Score=162.61 Aligned_cols=251 Identities=15% Similarity=0.221 Sum_probs=161.0
Q ss_pred cccCcceEEEccCCCeeEEEecC------------------------CEEEEEeCCceeEEEeecCCCcccCCCCCCccc
Q 016318 67 QIQGPESMAFDPLGRGPYTGVAD------------------------GRILFWDGLKWTDFAFTSNNRSELCNPKPIATS 122 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~~ly~~~~~------------------------g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (391)
++..|.+|++|++|+++.++..+ ++|++++.+.-+......
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--------------- 86 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--------------- 86 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC---------------
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC---------------
Confidence 46689999999999944444444 258888775111111111
Q ss_pred cccccCccCccceEEEecCCCcEEEEECCCC-eEEEeCCCC--eeEEceecc----CCCcccCCcceeecC-CCCEEEEe
Q 016318 123 YLKNEHICGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGG--LATSLATEA----EGVPLRFTNDLDIDD-EGNVYFTD 194 (391)
Q Consensus 123 ~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g--~~~~~~~~~----~~~~~~~~~~l~~d~-~G~ly~td 194 (391)
......|.++++++ +|+|||+|...+ |.++++++. .+..+.... ....+..|++|++++ +|++|+++
T Consensus 87 ----~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d 161 (329)
T 3fvz_A 87 ----KNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD 161 (329)
T ss_dssp ----TTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE
T ss_pred ----CCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEe
Confidence 01246799999998 789999998755 999999865 344443211 123466899999999 89999999
Q ss_pred C-CCcccchhheeeecccCCCceEEEEeCCCCeEEEec----------cCCCCcceEEEccCCCEEEEEeCCCCeEEEEE
Q 016318 195 S-STNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL----------RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYW 263 (391)
Q Consensus 195 ~-~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~----------~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~ 263 (391)
+ . +++|.+|++++.....+. ..+..|++|++++++..+||++..+++|.+++
T Consensus 162 ~~~-----------------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 162 GYC-----------------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp CSS-----------------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCC-----------------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence 5 3 478999997655555442 13456999999999556999999999999999
Q ss_pred ec-cccCccceeecc--cCCCCCceEeCCCCCEEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceE
Q 016318 264 LI-GEKAGNLEAFAI--LPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAM 340 (391)
Q Consensus 264 ~~-g~~~g~~~~~~~--~~g~p~~i~~d~~G~lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 340 (391)
.+ |.. ...+.. ....|.+++..+ |.+++..... . ++ ......
T Consensus 225 ~~~G~~---~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~-~-----v~-------------------------~~~~~~ 269 (329)
T 3fvz_A 225 TDTKEF---VREIKHASFGRNVFAISYIP-GFLFAVNGKP-Y-----FG-------------------------DQEPVQ 269 (329)
T ss_dssp TTTCCE---EEEECCTTTTTCEEEEEEET-TEEEEEECCC-C-----TT-------------------------CSCCCC
T ss_pred CCCCcE---EEEEeccccCCCcceeeecC-CEEEEeCCCE-E-----ec-------------------------cCCCcE
Confidence 76 421 112211 112345566666 5444432210 0 00 011123
Q ss_pred EEEEC-CCCCEEEEEeCCCCCeeeceeEEEEE-CCEEEEecCCCCeEEEEeC
Q 016318 341 AVKYS-PEGKILQVLEDSKGKVVKAISEVEEK-DGKLWMGSVLMPFVAVYDL 390 (391)
Q Consensus 341 v~~~d-~~g~~~~~~~~~~g~~~~~is~~~~~-~g~Lylgs~~~~~i~~~~~ 390 (391)
+..++ .+|+.+..+....+. +.....+..+ +|+||++...+..|.++++
T Consensus 270 v~~~~~~~g~~~~~~~~~~~~-~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 270 GFVMNFSSGEIIDVFKPVRKH-FDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEEETTTCCEEEEECCSSSC-CSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred EEEEEcCCCeEEEEEcCCCCc-cCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 44455 568877777533332 3345556554 4899999999999999875
No 17
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.82 E-value=2.2e-17 Score=151.66 Aligned_cols=231 Identities=12% Similarity=0.201 Sum_probs=164.4
Q ss_pred cccCcceEEEccCCCeeEEEec-CCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 67 QIQGPESMAFDPLGRGPYTGVA-DGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
....|.+|+++++|+ +|++.. +++|.+++.+ .+..+... .....|.++++++ +|+
T Consensus 60 ~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~g~~~~~~~~---------------------~~~~~~~~i~~~~-~g~ 116 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGD-IWFTENGANKIGKLSKKGGFTEYPLP---------------------QPDSGPYGITEGL-NGD 116 (300)
T ss_dssp TTCCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECS---------------------STTCCEEEEEECS-TTC
T ss_pred CCCcceeEEECCCCC-EEEEecCCCeEEEECCCCCeEEecCC---------------------CCCCCCccceECC-CCC
Confidence 346899999999999 565554 7899999877 43333210 1135689999998 799
Q ss_pred EEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 145 LYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 145 L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
|||++.. .+|++++++ +++..+... .....|++++++++|++|+++.. .++|+++|+
T Consensus 117 l~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~- 174 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD-GTIYEYDLP---NKGSYPAFITLGSDNALWFTENQ-----------------NNSIGRITN- 174 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSSEEEEETT-----------------TTEEEEECT-
T ss_pred EEEEccCCCeEEEECCC-CCEEEccCC---CCCCCceeEEECCCCCEEEEecC-----------------CCeEEEECC-
Confidence 9999985 459999998 655544211 12457899999999999999854 468999998
Q ss_pred CCeEEEec--cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec--ccCCCCCceEeCCCCCEEEEEcC
Q 016318 224 TKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA--ILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 224 ~~~~~~~~--~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~--~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
+++...+. .....|.+++++++++ +|+++...++|.+++.+| +...+. .....|.+|++|++|++|++...
T Consensus 175 ~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 175 TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTTG----EISEYDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred CCcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCCC----cEEEEECCCCCCCceEEEECCCCCEEEeccC
Confidence 56655443 3456799999999997 999988888999998633 222221 11235789999999999999855
Q ss_pred CCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEEE-CCEEEEe
Q 016318 300 RRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEK-DGKLWMG 378 (391)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~~-~g~Lylg 378 (391)
. ..+.+++++|+.. .+..+.+. ..+..+..+ +|+||++
T Consensus 250 ~--------------------------------------~~i~~~~~~g~~~-~~~~~~~~--~~~~~i~~~~~g~l~v~ 288 (300)
T 2qc5_A 250 A--------------------------------------NQIGRITNDNTIQ-EYQLQTEN--AEPHGITFGKDGSVWFA 288 (300)
T ss_dssp T--------------------------------------TEEEEECTTSCEE-EEECCSTT--CCCCCEEECTTSCEEEE
T ss_pred C--------------------------------------CeEEEECCCCcEE-EEECCccC--CccceeEeCCCCCEEEE
Confidence 3 3366788877654 44333222 234555554 5999999
Q ss_pred cCCCCeEEEEeC
Q 016318 379 SVLMPFVAVYDL 390 (391)
Q Consensus 379 s~~~~~i~~~~~ 390 (391)
+. + .|.+++.
T Consensus 289 ~~-~-~i~~~~p 298 (300)
T 2qc5_A 289 LK-C-KIGKLNL 298 (300)
T ss_dssp CS-S-EEEEEEE
T ss_pred cc-C-ceEEeCC
Confidence 98 6 8888764
No 18
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=1.6e-17 Score=152.51 Aligned_cols=231 Identities=10% Similarity=0.158 Sum_probs=162.8
Q ss_pred ccCcceEEEccCCCeeEEEe-cCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 68 IQGPESMAFDPLGRGPYTGV-ADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~-~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
...|.+|++|++|+ +|++. .+++|++++.+ .+..+... .....|.++++++ +|+|
T Consensus 56 ~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~~~~~~---------------------~~~~~~~~i~~~~-~g~l 112 (299)
T 2z2n_A 56 DAKVMCLTISSDGE-VWFTENAANKIGRITKKGIIKEYTLP---------------------NPDSAPYGITEGP-NGDI 112 (299)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECS---------------------STTCCEEEEEECT-TSCE
T ss_pred cCceeeEEECCCCC-EEEeCCCCCeEEEECCCCcEEEEeCC---------------------CcCCCceeeEECC-CCCE
Confidence 46799999999999 55555 47899999876 44333210 1145789999998 7899
Q ss_pred EEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 146 YIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 146 ~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
||++.. .+|+++|+ +++...+.... ....|++++++++|++|+++.. .++|+++|+ +
T Consensus 113 ~v~~~~~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~-~ 170 (299)
T 2z2n_A 113 WFTEMNGNRIGRITD-DGKIREYELPN---KGSYPSFITLGSDNALWFTENQ-----------------NNAIGRITE-S 170 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-T
T ss_pred EEEecCCceEEEECC-CCCEEEecCCC---CCCCCceEEEcCCCCEEEEeCC-----------------CCEEEEEcC-C
Confidence 999876 45999999 55555443221 2357899999999999999853 468999999 6
Q ss_pred CeEEEe--ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc--cCCCCCceEeCCCCCEEEEEcCC
Q 016318 225 KQTTVL--LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--LPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 225 ~~~~~~--~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~--~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
++...+ ......|++++++++++ +|+++...++|.+++..+ +...+.. ....|.+|++|++|++|++....
T Consensus 171 g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 171 GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITTSG----EITEFKIPTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECCCC----cEEEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence 776654 23456789999999998 999988788999998632 2333311 11468899999999999997543
Q ss_pred CchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEEECCEEEEecC
Q 016318 301 RSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 380 (391)
Q Consensus 301 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~~~g~Lylgs~ 380 (391)
..+.++|++|+ +..+..+.+. ..+..+...+|+||+++.
T Consensus 246 --------------------------------------~~i~~~d~~g~-~~~~~~~~~~--~~~~~i~~~~g~l~v~~~ 284 (299)
T 2z2n_A 246 --------------------------------------NKIGRLTSNNI-IEEYPIQIKS--AEPHGICFDGETIWFAME 284 (299)
T ss_dssp --------------------------------------TEEEEEETTTE-EEEEECSSSS--CCEEEEEECSSCEEEEET
T ss_pred --------------------------------------ceEEEECCCCc-eEEEeCCCCC--CccceEEecCCCEEEEec
Confidence 23666777664 3444333221 223444446799999976
Q ss_pred CCCeEEEEeC
Q 016318 381 LMPFVAVYDL 390 (391)
Q Consensus 381 ~~~~i~~~~~ 390 (391)
...|.+++.
T Consensus 285 -~~~l~~~~~ 293 (299)
T 2z2n_A 285 -CDKIGKLTL 293 (299)
T ss_dssp -TTEEEEEEE
T ss_pred -CCcEEEEEc
Confidence 678888764
No 19
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.81 E-value=5.9e-18 Score=160.34 Aligned_cols=202 Identities=14% Similarity=0.169 Sum_probs=136.1
Q ss_pred cCcceEEEccCCCeeEEEec---CC--EEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 69 QGPESMAFDPLGRGPYTGVA---DG--RILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~---~g--~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
..|++|+++++|+ +|++.. ++ +|++++......|.. .....| .....|+|+++|+ +|
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g~~~~~p~---~~~~~~-------------~~~~~p~gv~~d~-~g 78 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQDGLIPFPP---QSGNAI-------------ITFDTVLGIKSDG-NG 78 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETTEEEESCC---CCSSCC-------------CCCSCEEEEEECS-SS
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCCCeecCCC---cccCcc-------------cceeEeeEEEEcC-CC
Confidence 5899999999999 666532 23 788887223332211 000011 1256899999998 79
Q ss_pred cEEEEECC------CCeEEEeCCCCee-EEceec-cCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCC
Q 016318 144 DLYIADAY------FGLMKVGPEGGLA-TSLATE-AEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 144 ~L~V~d~~------~gl~~~d~~~g~~-~~~~~~-~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
+|||+|.. ..|+++|++++++ +.+... ....+..+++++++++ +|.+|+++++.. ..
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~ 144 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DK 144 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GG
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CC
Confidence 99999975 4699999998874 333221 1123345789999996 579999996311 14
Q ss_pred ceEEEEeCCCCeEEEeccC------------------------------CCCcceEEEccCCCEEEEEeCCCCeEEEEEe
Q 016318 215 GRVLKYDPTTKQTTVLLRN------------------------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWL 264 (391)
Q Consensus 215 g~l~~~d~~~~~~~~~~~~------------------------------~~~~ngia~~~d~~~l~v~et~~~~I~~~~~ 264 (391)
++|++||+.+++.....+. ...+|||+++||++.||++++.+.+|++++.
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 5788888876665443321 0247999999999999999998889999985
Q ss_pred cc---ccCccceeec-----ccCCCCCceEeCCCCCEEEEEcCCCc
Q 016318 265 IG---EKAGNLEAFA-----ILPGYPDNVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 265 ~g---~~~g~~~~~~-----~~~g~p~~i~~d~~G~lwva~~~~~~ 302 (391)
+. ...+..+.+. ...+.|++|++|++|++|++......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~ 270 (343)
T 2qe8_A 225 ADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSA 270 (343)
T ss_dssp HHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTE
T ss_pred HHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCe
Confidence 31 1111112111 12357999999999999999876543
No 20
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=7.1e-17 Score=148.20 Aligned_cols=185 Identities=14% Similarity=0.246 Sum_probs=135.2
Q ss_pred ccccCcceEEEccCCCeeEEEec-CCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVA-DGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
.....|.+|++|++|+ +|+++. +++|.+++.+ .+..+... .....|.++++++ +|
T Consensus 12 ~~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~~~~~~~~~~---------------------~~~~~~~~i~~~~-~g 68 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGK-VWITQHKANMISCINLDGKITEYPLP---------------------TPDAKVMCLTISS-DG 68 (299)
T ss_dssp SSSCCEEEEEECTTSC-EEEEETTTTEEEEECTTCCEEEEECS---------------------STTCCEEEEEECT-TS
T ss_pred CcCCCccceEECCCCC-EEEEecCCCcEEEEcCCCCeEEecCC---------------------cccCceeeEEECC-CC
Confidence 3456899999999999 666665 6899999877 33332210 1135689999998 79
Q ss_pred cEEEEECCC-CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 144 DLYIADAYF-GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 144 ~L~V~d~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
++|+++... +|++++++ ++++.+... .....|++++++++|++|+++.. .++|+++|+
T Consensus 69 ~l~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~ 127 (299)
T 2z2n_A 69 EVWFTENAANKIGRITKK-GIIKEYTLP---NPDSAPYGITEGPNGDIWFTEMN-----------------GNRIGRITD 127 (299)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT
T ss_pred CEEEeCCCCCeEEEECCC-CcEEEEeCC---CcCCCceeeEECCCCCEEEEecC-----------------CceEEEECC
Confidence 999998854 59999987 455544321 12357899999999999999853 468999999
Q ss_pred CCCeEEEec--cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec--ccCCCCCceEeCCCCCEEEEEc
Q 016318 223 TTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA--ILPGYPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 223 ~~~~~~~~~--~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~--~~~g~p~~i~~d~~G~lwva~~ 298 (391)
+++...+. .....|++++++++++ +|+++...++|++++.+ ++...+. .....|.+|++|++|++|++..
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITES----GDITEFKIPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT----CCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred -CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcCC----CcEEEeeCCCCCCcceeEEECCCCCEEEEcc
Confidence 56655443 2356799999999997 99998878899999863 2333321 1123578999999999999986
Q ss_pred CC
Q 016318 299 CR 300 (391)
Q Consensus 299 ~~ 300 (391)
..
T Consensus 202 ~~ 203 (299)
T 2z2n_A 202 IG 203 (299)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 21
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.79 E-value=2.5e-17 Score=150.19 Aligned_cols=189 Identities=17% Similarity=0.168 Sum_probs=138.9
Q ss_pred ccCcceEEEccC-CCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 68 IQGPESMAFDPL-GRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 68 ~~gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
...|+++++|++ ++++|++..+++|.+++.+ . ...+. ......|.++++|+++++
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~----------------------~~~~~~p~~ia~d~~~~~ 92 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII----------------------RQDLGSPEGIALDHLGRT 92 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE----------------------CTTCCCEEEEEEETTTTE
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE----------------------ECCCCCccEEEEEecCCe
Confidence 458999999985 5555666678899999876 2 11111 011367999999985689
Q ss_pred EEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 145 LYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 145 L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
||++|...+ |.+++.++...+.+... .+..|+++++|+ +|+||+++.. ..+++|++++.
T Consensus 93 lyv~d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~i~vd~~~g~lyv~~~~---------------~~~~~I~~~~~ 153 (267)
T 1npe_A 93 IFWTDSQLDRIEVAKMDGTQRRVLFDT----GLVNPRGIVTDPVRGNLYWTDWN---------------RDNPKIETSHM 153 (267)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEECS----SCSSEEEEEEETTTTEEEEEECC---------------SSSCEEEEEET
T ss_pred EEEEECCCCEEEEEEcCCCCEEEEEEC----CCCCccEEEEeeCCCEEEEEECC---------------CCCcEEEEEec
Confidence 999998755 99999987654444321 245799999999 5799999953 12468999988
Q ss_pred CCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCC
Q 016318 223 TTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRR 301 (391)
Q Consensus 223 ~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~ 301 (391)
++...+++. ..+..|+|++++++++.||++++..++|++++.+|. ....+......|++|++| ++++|++.....
T Consensus 154 dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~ 229 (267)
T 1npe_A 154 DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP---GRRKVLEGLQYPFAVTSY-GKNLYYTDWKTN 229 (267)
T ss_dssp TSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE---EEEEEEECCCSEEEEEEE-TTEEEEEETTTT
T ss_pred CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC---ceEEEecCCCCceEEEEe-CCEEEEEECCCC
Confidence 765555443 567789999999998889999999999999998763 223333333579999998 688999987653
No 22
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.78 E-value=2.9e-17 Score=156.14 Aligned_cols=191 Identities=17% Similarity=0.174 Sum_probs=144.7
Q ss_pred cccCcceEEEcc-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 67 QIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 67 ~~~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
.+..|+++++|+ ++.++|++..+++|.+++.+ ..+.+.. .....|.|+++|..++
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~----------------------~~~~~p~glavd~~~g 128 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS----------------------TGLESPGGLAVDWVHD 128 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------------SSCSCCCEEEEETTTT
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe----------------------CCCCCccEEEEecCCC
Confidence 467899999995 56777788888999999877 2222211 1145799999997678
Q ss_pred cEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEe
Q 016318 144 DLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD 221 (391)
Q Consensus 144 ~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d 221 (391)
+||++|...+ |.+++.++...+.+.. ..+..|++|++|+ +|.||++|... .++|.+++
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~l~~P~~iavdp~~g~ly~td~~~----------------~~~I~r~~ 188 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASS 188 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEEC----TTCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEE
T ss_pred eEEEEcCCCCeEEEEcCCCCceEEEEe----CCCCCcceEEEecCcCeEEEeccCC----------------CCEEEEEe
Confidence 9999998754 9999998765554432 1246799999997 67999999651 37899999
Q ss_pred CCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCCCCceEeCCCCCEEEEEcC
Q 016318 222 PTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 222 ~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
.++...+++. .++..||||+++++++.||++++..++|++++++|. ..+.+. ...+.|++|+++ +|++|++...
T Consensus 189 ~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~---~~~~~~~~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 189 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp TTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred CCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC---ceEEEEeCCCCCceEEEEE-CCEEEEecCC
Confidence 8876666654 567899999999988889999999999999998873 223333 223579999995 5789999877
Q ss_pred CCch
Q 016318 300 RRSL 303 (391)
Q Consensus 300 ~~~~ 303 (391)
...+
T Consensus 265 ~~~V 268 (349)
T 3v64_C 265 TKSI 268 (349)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 6543
No 23
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.76 E-value=4.9e-17 Score=156.64 Aligned_cols=190 Identities=17% Similarity=0.170 Sum_probs=143.4
Q ss_pred cccCcceEEEcc-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 67 QIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 67 ~~~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
.+..|+++++|+ ++.++|++..+++|++++.+ ..+.+.. .....|.|+++|+.++
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~----------------------~~~~~p~glavd~~~g 171 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS----------------------TGLESPGGLAVDWVHD 171 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC----------------------SSCSCCCCEEEETTTT
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe----------------------CCCCCccEEEEEeCCC
Confidence 467899999995 56777788889999999887 2222211 1145799999997678
Q ss_pred cEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEe
Q 016318 144 DLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD 221 (391)
Q Consensus 144 ~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d 221 (391)
+||++|...+ |.++++++...+.+.. ..+..|++|++|+ +|.||+++... .++|++++
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~----~~l~~P~giavdp~~g~ly~td~~~----------------~~~I~r~~ 231 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASS 231 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEE
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeec----CCCCCCcEEEEEcCCCeEEEeccCC----------------CCEEEEEe
Confidence 9999998755 9999998765554432 1256799999997 67899999641 37899999
Q ss_pred CCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCCCCceEeCCCCCEEEEEcC
Q 016318 222 PTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 222 ~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
+++...+++. .++..||||+++++++.|||+++..++|++++++|. ..+.+. ...+.|++|+++ ++++|++...
T Consensus 232 ~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P~giav~-~~~ly~td~~ 307 (386)
T 3v65_B 232 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGLPHPFAITVF-EDSLYWTDWH 307 (386)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC---SCEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred CCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC---eeEEEEECCCCCceEEEEE-CCEEEEeeCC
Confidence 9876655554 567889999999988889999999999999998873 223333 223579999995 5678888876
Q ss_pred CCc
Q 016318 300 RRS 302 (391)
Q Consensus 300 ~~~ 302 (391)
...
T Consensus 308 ~~~ 310 (386)
T 3v65_B 308 TKS 310 (386)
T ss_dssp TTE
T ss_pred CCe
Confidence 544
No 24
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.76 E-value=1.4e-16 Score=149.18 Aligned_cols=194 Identities=15% Similarity=0.170 Sum_probs=142.5
Q ss_pred cccCcceEEEccC-CCeeEEEecCCEEEEEeCCce---eEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 67 QIQGPESMAFDPL-GRGPYTGVADGRILFWDGLKW---TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 67 ~~~gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
.+..|+++++|++ +.++|++..+++|.+++.+.. ..... ........|.||++|..+
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~-------------------~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-------------------VISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE-------------------EECSSCSCCCEEEEETTT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEE-------------------EEeCCCCCcCEEEEeecC
Confidence 3678999999975 567777888899999987520 00000 001124679999999657
Q ss_pred CcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 143 GDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 143 g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
++||++|...+ |.++++++...+.+... .+..|+++++|+ +|.||+++.+ ..++|+++
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~ 148 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKG 148 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEEC----CCCCcceEEeCCCCCEEEEEccC----------------CCCeEEEE
Confidence 89999998755 99999987766655432 245799999997 6799999954 13689999
Q ss_pred eCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc---cCCCCCceEeCCCCCEEEE
Q 016318 221 DPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI---LPGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 221 d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~---~~g~p~~i~~d~~G~lwva 296 (391)
++++...+++. ..+..|+||+++++++.||++++..++|.+++++|. ..+.+.. ..+.|++|+++. |++|++
T Consensus 149 ~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~---~~~~~~~~~~~~~~P~giav~~-~~ly~~ 224 (316)
T 1ijq_A 149 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFE-DKVFWT 224 (316)
T ss_dssp ETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEECTTTTSSEEEEEEET-TEEEEE
T ss_pred cCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC---ceEEEeecCCccCCcEEEEEEC-CEEEEE
Confidence 98766555554 567899999999998889999999999999998873 2344433 235799999974 789998
Q ss_pred EcCCCch
Q 016318 297 IHCRRSL 303 (391)
Q Consensus 297 ~~~~~~~ 303 (391)
......+
T Consensus 225 d~~~~~V 231 (316)
T 1ijq_A 225 DIINEAI 231 (316)
T ss_dssp ETTTTEE
T ss_pred ECCCCeE
Confidence 8765543
No 25
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.75 E-value=1.1e-15 Score=145.29 Aligned_cols=147 Identities=16% Similarity=0.241 Sum_probs=114.6
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheee
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~ 207 (391)
..+|.|+++|+.++.||++|...+ |++++++++..+.+... .+..|+++++|+ .|+||++++.
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~ly~~d~~----------- 136 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSG----------- 136 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SCSCCCEEEEETTTTEEEEEETT-----------
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC----CCCCccEEEEecCCCeEEEEcCC-----------
Confidence 467999999976889999998755 99999998766554321 245789999996 6799999965
Q ss_pred ecccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCC-CeEEEEEeccccCccceeec-ccCCCCCc
Q 016318 208 VFSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFA-ILPGYPDN 284 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~-~~I~~~~~~g~~~g~~~~~~-~~~g~p~~ 284 (391)
.++|.+++.++...+++. ..+..|++|+++|++..||+++... ++|+|++++|.. .+.+. ..-..|++
T Consensus 137 ------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnG 207 (349)
T 3v64_C 137 ------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNG 207 (349)
T ss_dssp ------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEESCCSSCSCEEE
T ss_pred ------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCcce
Confidence 468999998876655554 5678999999999888899999988 999999988742 23332 22246999
Q ss_pred eEeCC-CCCEEEEEcCC
Q 016318 285 VRTNE-KGEFWVAIHCR 300 (391)
Q Consensus 285 i~~d~-~G~lwva~~~~ 300 (391)
|++|+ ++++|++....
T Consensus 208 la~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 208 LTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp EEEETTTTEEEEEETTT
T ss_pred EEEeCCCCEEEEEECCC
Confidence 99995 67799998664
No 26
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.73 E-value=2.5e-15 Score=144.74 Aligned_cols=147 Identities=16% Similarity=0.241 Sum_probs=114.2
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheee
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~ 207 (391)
..+|.|+++|+.++.||++|...+ |++++++++..+.+... .+..|+++++|+ .|+||++++.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~lY~~d~~----------- 179 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSG----------- 179 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS----SCSCCCCEEEETTTTEEEEEETT-----------
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC----CCCCccEEEEEeCCCeEEEEcCC-----------
Confidence 567999999976789999998765 99999998766654321 245789999996 6899999965
Q ss_pred ecccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCC-CeEEEEEeccccCccceeec-ccCCCCCc
Q 016318 208 VFSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFA-ILPGYPDN 284 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~-~~I~~~~~~g~~~g~~~~~~-~~~g~p~~ 284 (391)
.++|.+++.+++..+++. .++..|++|+++|++..||+++... ++|+|++++|.. ...+. ..-..|++
T Consensus 180 ------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnG 250 (386)
T 3v65_B 180 ------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNG 250 (386)
T ss_dssp ------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEE
T ss_pred ------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCeee
Confidence 468999998766555544 5678999999999888899999987 899999988742 22332 22246999
Q ss_pred eEeCC-CCCEEEEEcCC
Q 016318 285 VRTNE-KGEFWVAIHCR 300 (391)
Q Consensus 285 i~~d~-~G~lwva~~~~ 300 (391)
|++|+ ++++|++....
T Consensus 251 lavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp EEEEGGGTEEEEEETTT
T ss_pred EEEeCCCCEEEEEECCC
Confidence 99994 67799998664
No 27
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=4.7e-16 Score=141.02 Aligned_cols=189 Identities=21% Similarity=0.278 Sum_probs=137.0
Q ss_pred ccccCcceEEEccCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
..+..|.+|+++++|+ +|++..+++|.+++.+ ..... .. ......|.++++++ +|+
T Consensus 64 ~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~~~--~~-------------------~~~~~~p~~i~~~~-~g~ 120 (270)
T 1rwi_B 64 NGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQTV--LP-------------------FDGLNYPEGLAVDT-QGA 120 (270)
T ss_dssp CSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCEE--CC-------------------CCSCSSEEEEEECT-TCC
T ss_pred CCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCceEee--ee-------------------cCCcCCCcceEECC-CCC
Confidence 3456899999999999 7776668899999876 21110 00 01135689999998 789
Q ss_pred EEEEECCC-CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 145 LYIADAYF-GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 145 L~V~d~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
|||++... .|++++..+....... ......|++|+++++|++|+++.. +++|.+||++
T Consensus 121 l~v~~~~~~~i~~~~~~~~~~~~~~----~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~ 179 (270)
T 1rwi_B 121 VYVADRGNNRVVKLAAGSKTQTVLP----FTGLNDPDGVAVDNSGNVYVTDTD-----------------NNRVVKLEAE 179 (270)
T ss_dssp EEEEEGGGTEEEEECTTCCSCEECC----CCSCCSCCCEEECTTCCEEEEEGG-----------------GTEEEEECTT
T ss_pred EEEEECCCCEEEEEECCCceeEeec----cccCCCceeEEEeCCCCEEEEECC-----------------CCEEEEEecC
Confidence 99999764 4999976654333221 112457999999999999999853 4689999998
Q ss_pred CCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCCCCceEeCCCCCEEEEEcCCC
Q 016318 224 TKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCRR 301 (391)
Q Consensus 224 ~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~~d~~G~lwva~~~~~ 301 (391)
++...... ..+..|++|+++++|+ +|+++..+++|++++.++... .... .....|.+|+++++|++|++.....
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTS---TVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCC---EECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred CCceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcc---eeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 77665443 4457899999999996 999998888999998765321 1111 1113588999999999999987654
Q ss_pred c
Q 016318 302 S 302 (391)
Q Consensus 302 ~ 302 (391)
.
T Consensus 256 ~ 256 (270)
T 1rwi_B 256 R 256 (270)
T ss_dssp E
T ss_pred E
Confidence 3
No 28
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=1.5e-15 Score=148.95 Aligned_cols=246 Identities=15% Similarity=0.154 Sum_probs=166.3
Q ss_pred cccccCcceEEEccC--CCeeEEEec-CCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEE-
Q 016318 65 LNQIQGPESMAFDPL--GRGPYTGVA-DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF- 138 (391)
Q Consensus 65 ~~~~~gPe~i~~d~~--G~~ly~~~~-~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~- 138 (391)
.+.+..|..|++||+ ++ ||++.. +++|.+++.+ .+..+...+. ....+|.+|++
T Consensus 135 ~~~~~~p~~la~dp~~~~~-Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-------------------~~~~~p~~ia~~ 194 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDH-LYICYDGHKAIQLIDLKNRMLSSPLNINT-------------------IPTNRIRSIAFN 194 (496)
T ss_dssp CBCCCSEEEEEEETTEEEE-EEEEEETEEEEEEEETTTTEEEEEECCTT-------------------SSCSBEEEEEEC
T ss_pred ccccCCCCEEEEccCCCCE-EEEEECCCCeEEEEECCCCEEEEEEccCc-------------------cccCCCcEEEEe
Confidence 556778999999973 55 777665 4789999877 4444432110 12467999999
Q ss_pred ------ecCCCcEEEEECCC-------CeEEEeCCC-CeeE------EceeccCCCcccCCcceeecC-CCCEEEEeCCC
Q 016318 139 ------DKKTGDLYIADAYF-------GLMKVGPEG-GLAT------SLATEAEGVPLRFTNDLDIDD-EGNVYFTDSST 197 (391)
Q Consensus 139 ------d~~~g~L~V~d~~~-------gl~~~d~~~-g~~~------~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~ 197 (391)
+++++.|||++... .++.++... |.+. .+. .+..|+++++++ +|.||+++..
T Consensus 195 ~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~- 267 (496)
T 3kya_A 195 KKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE- 267 (496)
T ss_dssp CCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT-
T ss_pred ecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC-
Confidence 98433499999875 278886554 3332 221 245799999999 6899999964
Q ss_pred cccchhheeeecccCCCceEEEEeCC-------CCeE------------EEe--ccCCCCcceEEEccCCCEEEEEeCCC
Q 016318 198 NYQRRNFMQLVFSAEDTGRVLKYDPT-------TKQT------------TVL--LRNLQFPNGLSLSKDKSFFVFCEGSV 256 (391)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~l~~~d~~-------~~~~------------~~~--~~~~~~~ngia~~~d~~~l~v~et~~ 256 (391)
+++|++||++ +++. +.+ ......|.+|+++|+|+.|||+++.+
T Consensus 268 ----------------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~ 331 (496)
T 3kya_A 268 ----------------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINN 331 (496)
T ss_dssp ----------------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred ----------------CCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCC
Confidence 5789999987 5654 122 12234688999999999999999999
Q ss_pred CeEEEEEeccccC--ccceeeccc---C------------CCCC-ceEeC-------CCCCEEEEEcCCCchhhhhhhcC
Q 016318 257 GRLHKYWLIGEKA--GNLEAFAIL---P------------GYPD-NVRTN-------EKGEFWVAIHCRRSLYSHLMALY 311 (391)
Q Consensus 257 ~~I~~~~~~g~~~--g~~~~~~~~---~------------g~p~-~i~~d-------~~G~lwva~~~~~~~~~~~l~~~ 311 (391)
++|+|++.++... .....++.. . ..|. +++++ .+|+|||+...+++
T Consensus 332 h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~r--------- 402 (496)
T 3kya_A 332 HYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFC--------- 402 (496)
T ss_dssp TEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTE---------
T ss_pred CEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCE---------
Confidence 9999988776321 111222211 1 2477 77887 68899999877533
Q ss_pred ccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeC--------------CCC-----CeeeceeEEEEEC
Q 016318 312 PKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLED--------------SKG-----KVVKAISEVEEKD 372 (391)
Q Consensus 312 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~--------------~~g-----~~~~~is~~~~~~ 372 (391)
|.+++++|.+...... .+| ..++..+.+..+.
T Consensus 403 -----------------------------Ir~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~ 453 (496)
T 3kya_A 403 -----------------------------VRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD 453 (496)
T ss_dssp -----------------------------EEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred -----------------------------EEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence 4556666654433322 112 1244556676553
Q ss_pred --CEEEEecCCCCeEEEEeCC
Q 016318 373 --GKLWMGSVLMPFVAVYDLS 391 (391)
Q Consensus 373 --g~Lylgs~~~~~i~~~~~~ 391 (391)
|.||+....+++|.++.++
T Consensus 454 ~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 454 VKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp TTTEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEECC
Confidence 8999999999999998763
No 29
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.73 E-value=4.2e-16 Score=146.08 Aligned_cols=190 Identities=18% Similarity=0.188 Sum_probs=142.0
Q ss_pred ccCcceEEEcc-CCCeeEEEecCCEEEEEeCC-ce--eEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 68 IQGPESMAFDP-LGRGPYTGVADGRILFWDGL-KW--TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 68 ~~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
+..|.++++|+ ++.++|++..+++|.+++.+ .. ..+.. .....|.|+++|..++
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~----------------------~~l~~p~glavd~~~g 91 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----------------------SGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE----------------------ECCSCCCEEEEETTTT
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc----------------------CCCCCccEEEEEcCCC
Confidence 55788999987 57778888899999999876 21 11111 1146799999996578
Q ss_pred cEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEe
Q 016318 144 DLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD 221 (391)
Q Consensus 144 ~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d 221 (391)
+||++|...+ |.++++++...+.+.. ..+..|+++++|+ .|.||+++.+ ..++|++++
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~ 151 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAG 151 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEEC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEe----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEE
Confidence 9999998755 9999998765555532 2346799999997 5899999953 147899999
Q ss_pred CCCCeEEEe-ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc-cCCCCCceEeCCCCCEEEEEcC
Q 016318 222 PTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 222 ~~~~~~~~~-~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~~G~lwva~~~ 299 (391)
.++...+++ ..++..||||+++++++.||++++..++|++++++|. ..+.+.. .-+.|++|+++.+ .+|++...
T Consensus 152 ~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P~glav~~~-~lywtd~~ 227 (318)
T 3sov_A 152 MDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT---NRQAVVKGSLPHPFALTLFED-ILYWTDWS 227 (318)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSCCSCEEEEEEETT-EEEEEETT
T ss_pred cCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC---ceEEEecCCCCCceEEEEeCC-EEEEEecC
Confidence 876555554 3668899999999988889999999999999999873 2344433 3357999999854 56667766
Q ss_pred CCch
Q 016318 300 RRSL 303 (391)
Q Consensus 300 ~~~~ 303 (391)
...+
T Consensus 228 ~~~V 231 (318)
T 3sov_A 228 THSI 231 (318)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 5443
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=1.9e-15 Score=142.11 Aligned_cols=221 Identities=13% Similarity=0.133 Sum_probs=148.4
Q ss_pred ccCcceEEEccCCCeeEEEe-cCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 68 IQGPESMAFDPLGRGPYTGV-ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~-~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
...|++|+++++|+ +|++. .++.|.++|....+........ ........|.+|+++ +++||
T Consensus 83 ~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g---------------~~~~~~~~p~~i~~~--~~~ly 144 (328)
T 3dsm_A 83 FTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECP---------------DMDMESGSTEQMVQY--GKYVY 144 (328)
T ss_dssp CSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECT---------------TCCTTTCBCCCEEEE--TTEEE
T ss_pred CCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcC---------------CccccCCCcceEEEE--CCEEE
Confidence 46899999988886 78777 7899999998732222111100 000012378999994 78999
Q ss_pred EEECC--CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 147 IADAY--FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 147 V~d~~--~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
|++.. ..|.++|++++++...... ...|++++++++|++|+++.+.... .......++|+++|+++
T Consensus 145 v~~~~~~~~v~viD~~t~~~~~~i~~-----g~~p~~i~~~~dG~l~v~~~~~~~~-------~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 145 VNCWSYQNRILKIDTETDKVVDELTI-----GIQPTSLVMDKYNKMWTITDGGYEG-------SPYGYEAPSLYRIDAET 212 (328)
T ss_dssp EEECTTCCEEEEEETTTTEEEEEEEC-----SSCBCCCEECTTSEEEEEBCCBCTT-------CSSCBCCCEEEEEETTT
T ss_pred EEcCCCCCEEEEEECCCCeEEEEEEc-----CCCccceEEcCCCCEEEEECCCccC-------CccccCCceEEEEECCC
Confidence 99963 4599999998875543221 1358999999999999998541000 00001137899999999
Q ss_pred CeEEEecc--CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc-CCCCCceEeCC-CCCEEEEEcCC
Q 016318 225 KQTTVLLR--NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL-PGYPDNVRTNE-KGEFWVAIHCR 300 (391)
Q Consensus 225 ~~~~~~~~--~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~-~g~p~~i~~d~-~G~lwva~~~~ 300 (391)
+++..... ....|++++++||++.+|+++. .|++++.+..+... ..+... ...|++|++|+ +|++||+....
T Consensus 213 ~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~~~~ 288 (328)
T 3dsm_A 213 FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVADAID 288 (328)
T ss_dssp TEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEECTT
T ss_pred CeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEcccc
Confidence 88754332 2347999999999999999864 89999876533211 122221 24799999997 78899997321
Q ss_pred CchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeC
Q 016318 301 RSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLED 356 (391)
Q Consensus 301 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~ 356 (391)
- ...+.+.+||++|+.+..+..
T Consensus 289 y----------------------------------~~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 289 Y----------------------------------QQQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp S----------------------------------SSEEEEEEECTTCCEEEEEEE
T ss_pred c----------------------------------ccCCEEEEECCCCCEEEEEEe
Confidence 0 012567888888888877743
No 31
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.72 E-value=3.7e-15 Score=135.73 Aligned_cols=146 Identities=17% Similarity=0.210 Sum_probs=110.8
Q ss_pred CccceEEEecCCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCC-CCEEEEeCCCcccchhheeee
Q 016318 131 GRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRNFMQLV 208 (391)
Q Consensus 131 g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~-G~ly~td~~~~~~~~~~~~~~ 208 (391)
.+|.|+++|+++++||++|...+ |++++++++..+.+.. ..+..|++++++++ |++|+++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~~~~~p~~ia~d~~~~~lyv~d~~------------ 99 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----QDLGSPEGIALDHLGRTIFWTDSQ------------ 99 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----TTCCCEEEEEEETTTTEEEEEETT------------
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----CCCCCccEEEEEecCCeEEEEECC------------
Confidence 56899999986789999998765 9999998876554432 12457999999985 789999965
Q ss_pred cccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCC--CCeEEEEEeccccCccceeec-ccCCCCCc
Q 016318 209 FSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGS--VGRLHKYWLIGEKAGNLEAFA-ILPGYPDN 284 (391)
Q Consensus 209 ~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~--~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~ 284 (391)
+++|.+++.++...+.+. .++..|+++++++++..+|+++.. +++|++++++|.. .+.+. .....|.+
T Consensus 100 -----~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---~~~~~~~~~~~P~g 171 (267)
T 1npe_A 100 -----LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRILAQDNLGLPNG 171 (267)
T ss_dssp -----TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEEECTTCSCEEE
T ss_pred -----CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---cEEEEECCCCCCcE
Confidence 478999998765544443 456789999999987779999976 5799999987742 23332 22247999
Q ss_pred eEeCCC-CCEEEEEcCC
Q 016318 285 VRTNEK-GEFWVAIHCR 300 (391)
Q Consensus 285 i~~d~~-G~lwva~~~~ 300 (391)
|++|++ +++|++....
T Consensus 172 ia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp EEEETTTTEEEEEETTT
T ss_pred EEEcCCCCEEEEEECCC
Confidence 999986 4699988764
No 32
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.71 E-value=6.5e-16 Score=157.50 Aligned_cols=192 Identities=18% Similarity=0.147 Sum_probs=149.5
Q ss_pred ccccCcceEEEcc-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 66 NQIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 66 ~~~~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
..+..|.+|++|+ +|.++|++..+++|.+++.+ ..+.+.. .....|.||++|..+
T Consensus 34 ~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~----------------------~g~~~P~GlAvD~~~ 91 (628)
T 4a0p_A 34 TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE----------------------FGLDYPEGMAVDWLG 91 (628)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------------SSCSCCCEEEEETTT
T ss_pred CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe----------------------CCCCCcceEEEEeCC
Confidence 4467899999997 46667788888999999876 2232211 114679999999767
Q ss_pred CcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 143 GDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 143 g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
++||++|...+ |.+++.++...+.+.. ..+..|++|++|+ +|.||++|.+. .++|.+.
T Consensus 92 ~~LY~tD~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g~----------------~~~I~r~ 151 (628)
T 4a0p_A 92 KNLYWADTGTNRIEVSKLDGQHRQVLVW----KDLDSPRALALDPAEGFMYWTEWGG----------------KPKIDRA 151 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSTTCEEEEC----SSCCCEEEEEEETTTTEEEEEECSS----------------SCEEEEE
T ss_pred CEEEEEECCCCEEEEEecCCCcEEEEEe----CCCCCcccEEEccCCCeEEEeCCCC----------------CCEEEEE
Confidence 89999999865 9999998776555542 2356799999997 78999999541 4689999
Q ss_pred eCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCC
Q 016318 221 DPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 221 d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
+.++...+++...+..|+||+++++++.||++++..++|++++++|.. .+++......|.+|+++. +++|++....
T Consensus 152 ~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~---~~v~~~~l~~P~glav~~-~~ly~tD~~~ 227 (628)
T 4a0p_A 152 AMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN---REVIADDLPHPFGLTQYQ-DYIYWTDWSR 227 (628)
T ss_dssp ETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECCSCEEEEEEET-TEEEEEETTT
T ss_pred eCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc---eEEeeccCCCceEEEEEC-CEEEEecCCC
Confidence 998887888888899999999999988899999999999999998842 245544334799999986 6788887654
Q ss_pred Cch
Q 016318 301 RSL 303 (391)
Q Consensus 301 ~~~ 303 (391)
..+
T Consensus 228 ~~I 230 (628)
T 4a0p_A 228 RSI 230 (628)
T ss_dssp TEE
T ss_pred CEE
Confidence 443
No 33
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.71 E-value=1.7e-15 Score=146.56 Aligned_cols=194 Identities=15% Similarity=0.166 Sum_probs=142.0
Q ss_pred cccCcceEEEcc-CCCeeEEEecCCEEEEEeCCcee---EEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 67 QIQGPESMAFDP-LGRGPYTGVADGRILFWDGLKWT---DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 67 ~~~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
.+..|.+|++|+ ++.++|++..+++|++++.+... .... ........|.||++|..+
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~-------------------~~~~~~~~p~glavD~~~ 170 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-------------------VISRDIQAPDGLAVDWIH 170 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEE-------------------EECSSCSCEEEEEEETTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceE-------------------EEeCCCCCcccEEEEecC
Confidence 467899999996 56677788888999999876210 0000 011124679999999757
Q ss_pred CcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 143 GDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 143 g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
++||++|...+ |.++++++...+.+... .+..|++|++|+ .|.||++|.+. .++|.++
T Consensus 171 ~~lY~~d~~~~~I~~~~~~g~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~~----------------~~~I~~~ 230 (400)
T 3p5b_L 171 SNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKG 230 (400)
T ss_dssp TEEEEEETTTTEEEEECTTTCSEEEEEEC----SSCCEEEEEEETTTTEEEEEECSS----------------SCCEEEE
T ss_pred CceEEEECCCCeEEEEeCCCCceEEEEeC----CCCCcceEEEecccCeEEEEeCCC----------------CCEEEEE
Confidence 89999998865 99999998766665432 245799999998 67999999541 3689999
Q ss_pred eCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc---CCCCCceEeCCCCCEEEE
Q 016318 221 DPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL---PGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 221 d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~---~g~p~~i~~d~~G~lwva 296 (391)
+.++...+++. .++..|+||+++++++.|||+++..++|++++++|. ..+.+... -..|.+|+++. +++|++
T Consensus 231 ~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~l~~P~gl~v~~-~~lywt 306 (400)
T 3p5b_L 231 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFE-DKVFWT 306 (400)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CCEEEEECSSTTSSEEEEEEET-TEEEEE
T ss_pred eCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC---ccEEEEeCCCCCCCCEEEEEeC-CEEEEe
Confidence 98876655554 567899999999988889999999999999999873 23334321 24689999965 467777
Q ss_pred EcCCCch
Q 016318 297 IHCRRSL 303 (391)
Q Consensus 297 ~~~~~~~ 303 (391)
......+
T Consensus 307 d~~~~~V 313 (400)
T 3p5b_L 307 DIINEAI 313 (400)
T ss_dssp ESSSCSE
T ss_pred cCCCCeE
Confidence 7665443
No 34
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.71 E-value=3.5e-15 Score=141.90 Aligned_cols=179 Identities=15% Similarity=0.145 Sum_probs=121.1
Q ss_pred cceeccccccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEe
Q 016318 60 SEIKFLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFD 139 (391)
Q Consensus 60 ~~~~~~~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d 139 (391)
++.+.. .+..|++|+++++|+ +|++..+|+|++++.+..+.+..... .....+.|+||+++
T Consensus 21 ~~~va~-~l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~~~~~~~~v-----------------~~~g~~g~~gia~~ 81 (354)
T 3a9g_A 21 ISEVAS-DLEVPWSIAPLGGGR-YLVTERPGRLVLISPSGKKLVASFDV-----------------ANVGEAGLLGLALH 81 (354)
T ss_dssp EEEEEC-SCSCEEEEEEEETTE-EEEEETTTEEEEECSSCEEEEEECCC-----------------CCSTTCSEEEEEEC
T ss_pred EEEEeC-CCCCCeEEEEcCCCe-EEEEeCCCEEEEEeCCCceEeeccce-----------------eecCCCceeeEEeC
Confidence 344433 478999999999998 88888889999997653244432210 00113569999999
Q ss_pred cC---CCcEEEEECC--------CCeEEEeCCCC-----eeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchh
Q 016318 140 KK---TGDLYIADAY--------FGLMKVGPEGG-----LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRN 203 (391)
Q Consensus 140 ~~---~g~L~V~d~~--------~gl~~~d~~~g-----~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~ 203 (391)
++ ++.|||++.. ..|++++.+++ ..+.+...........+++|++++||+||+++...... .
T Consensus 82 pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~--~ 159 (354)
T 3a9g_A 82 PEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADP--R 159 (354)
T ss_dssp TTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCG--G
T ss_pred CCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCC--c
Confidence 84 5899999874 45999988765 23333332222234578999999999999996331110 0
Q ss_pred heeeecccCCCceEEEEeCCCC--------eEEEeccCCCCcceEEEcc-CCCEEEEEeCCCCe---EEEE
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTK--------QTTVLLRNLQFPNGLSLSK-DKSFFVFCEGSVGR---LHKY 262 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~--------~~~~~~~~~~~~ngia~~~-d~~~l~v~et~~~~---I~~~ 262 (391)
...+ .....|+|+|+++++. ..+++..++..|+|+++++ +++ ||++|...++ |.++
T Consensus 160 ~~~d--~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i 227 (354)
T 3a9g_A 160 LAQD--LSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGV-MVATEHGPVGHDEVNII 227 (354)
T ss_dssp GGTC--TTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCC-EEEEECCSSSCCEEEEE
T ss_pred cccC--CCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCC-EEEEecCCCCCcEEEEe
Confidence 0000 1233589999999764 3466777889999999999 566 9999987654 5554
No 35
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.70 E-value=3.9e-15 Score=156.41 Aligned_cols=235 Identities=13% Similarity=0.235 Sum_probs=164.8
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V 147 (391)
-.+|+.|++|+ +|+|+.+++|.+++.. .+..+....... ..........+++.|+ +|+ |||
T Consensus 359 V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~--------------~~~l~~~~v~~i~~d~-~g~~lWi 422 (795)
T 4a2l_A 359 VSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDES--------------ARGIGSNNIKAVYVDE-KKSLVYI 422 (795)
T ss_dssp EEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC--------------------CCSCSCEEEEEEET-TTTEEEE
T ss_pred eEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCc--------------ccCCCCccEEEEEEcC-CCCEEEE
Confidence 35788999998 9999999899999886 454442110000 0000124467888887 789 999
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
+....||+++|+++++++.+...........+..++.|++|+||+++. ++|++||+++++.
T Consensus 423 gt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 423 GTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------------------SALVRFNPEQRSF 483 (795)
T ss_dssp EETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------------------SCEEEEETTTTEE
T ss_pred EeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------------------CceeEEeCCCCeE
Confidence 998889999999998887764322222234677889999999999984 4799999999888
Q ss_pred EEeccC-----C--CCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec---ccCCC----CCceEeCCCCCE
Q 016318 228 TVLLRN-----L--QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA---ILPGY----PDNVRTNEKGEF 293 (391)
Q Consensus 228 ~~~~~~-----~--~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~---~~~g~----p~~i~~d~~G~l 293 (391)
+.+... + ...+.++.+++|+ +|++.. +.|++++.++.. . .+. ..++. ...|..|++|++
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~---~-~~~~~~~~~~l~~~~i~~i~~d~~g~l 556 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKR-LWIGGE--EGLSVFKQEGLD---I-QKASILPVSNVTKLFTNCIYEASNGII 556 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCC-EEEEES--SCEEEEEEETTE---E-EECCCSCSCGGGGSCEEEEEECTTSCE
T ss_pred EEccccccccccCCceEEEEEECCCCC-EEEEeC--CceEEEeCCCCe---E-EEecCCCCCCCCCCeeEEEEECCCCCE
Confidence 776432 1 2456788898998 999854 689999865432 2 221 11122 345888999999
Q ss_pred EEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEEE-C
Q 016318 294 WVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEK-D 372 (391)
Q Consensus 294 wva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~~-~ 372 (391)
|+++..+ +.++|++.+.+..|...+|.....+.++.++ +
T Consensus 557 WigT~~G----------------------------------------l~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~ 596 (795)
T 4a2l_A 557 WVGTREG----------------------------------------FYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSF 596 (795)
T ss_dssp EEEESSC----------------------------------------EEEEETTTTEEEEECGGGTCSCSCEEEEEECTT
T ss_pred EEEeCCC----------------------------------------ceeECCCCCcEEEeCCCCCCchhheEEEEECCC
Confidence 9998652 5667777777777776667665567777766 4
Q ss_pred CEEEEecCCCCeEEEEe
Q 016318 373 GKLWMGSVLMPFVAVYD 389 (391)
Q Consensus 373 g~Lylgs~~~~~i~~~~ 389 (391)
|+||+|+ ...|.+++
T Consensus 597 g~lWi~t--~~Gl~~~~ 611 (795)
T 4a2l_A 597 GRLWLST--NRGISCFN 611 (795)
T ss_dssp SCEEEEE--TTEEEEEE
T ss_pred CCEEEEc--CCceEEEc
Confidence 8999998 35666664
No 36
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.70 E-value=1e-14 Score=136.59 Aligned_cols=147 Identities=15% Similarity=0.219 Sum_probs=109.6
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCC----CeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchh
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEG----GLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRN 203 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~----g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~ 203 (391)
..+|.|+++|+++++||++|...+ |+++++++ ...+.+.. ..+..|.+|++|+ +|+||+++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~----~~~~~p~glavd~~~~~ly~~d~~------- 97 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV------- 97 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSCSCCCEEEEETTTTEEEEEETT-------
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----CCCCCcCEEEEeecCCeEEEEECC-------
Confidence 577999999976789999998755 99999886 22233221 1245789999996 6799999965
Q ss_pred heeeecccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCC-CeEEEEEeccccCccceeecc-cCC
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFAI-LPG 280 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~-~~I~~~~~~g~~~g~~~~~~~-~~g 280 (391)
.++|.+++++++..+++. ..+..|++|+++|++..||+++... ++|++++++|.. .+.+.. .-.
T Consensus 98 ----------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---~~~~~~~~~~ 164 (316)
T 1ijq_A 98 ----------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQ 164 (316)
T ss_dssp ----------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EEEEECSSCS
T ss_pred ----------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC---eEEEEECCCC
Confidence 478999999877666655 4678999999999888899999875 799999988742 233322 224
Q ss_pred CCCceEeCC-CCCEEEEEcCC
Q 016318 281 YPDNVRTNE-KGEFWVAIHCR 300 (391)
Q Consensus 281 ~p~~i~~d~-~G~lwva~~~~ 300 (391)
.|.+|++|+ ++++|++....
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTT
T ss_pred CceEEEEeccCCEEEEEECCC
Confidence 799999996 56799988664
No 37
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.70 E-value=1.1e-14 Score=148.13 Aligned_cols=193 Identities=18% Similarity=0.194 Sum_probs=141.1
Q ss_pred cccccCcceEEEcc-CCCeeEEEecCCEEEEEeCCce---eEEEeecCCCcccCCCCCCccccccccCccCccceEEEec
Q 016318 65 LNQIQGPESMAFDP-LGRGPYTGVADGRILFWDGLKW---TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (391)
Q Consensus 65 ~~~~~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~ 140 (391)
...+..|.+|++++ +|.++|++..+++|.+++.+.. ..+.. .....|.||++|.
T Consensus 36 ~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~----------------------~~~~~P~GlAvD~ 93 (619)
T 3s94_A 36 VGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----------------------SGLLSPDGLACDW 93 (619)
T ss_dssp CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC----------------------SSCSCEEEEEEET
T ss_pred EcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe----------------------CCCCCcCeEEEEe
Confidence 34577899999997 5566678888899999987621 11111 1146799999998
Q ss_pred CCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEE
Q 016318 141 KTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVL 218 (391)
Q Consensus 141 ~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~ 218 (391)
.+++||++|...+ |.+++.++...+.+.. ..+..|++|++|+ +|.||+||.+. .++|.
T Consensus 94 ~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g~----------------~~~I~ 153 (619)
T 3s94_A 94 LGEKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWGE----------------VPKIE 153 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSCCCCEEEETTTTEEEEEECSS----------------SCEEE
T ss_pred cCCEEEEEeCCCCEEEEEECCCCCEEEEEe----CCCCCCceEEEecCCCeEEEeccCC----------------CCEEE
Confidence 6788999998866 8999999876665542 2356899999998 58899999541 36899
Q ss_pred EEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc-cCCCCCceEeCCCCCEEEE
Q 016318 219 KYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 219 ~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~~G~lwva 296 (391)
+.+.++...+++. ..+..|+||+++++++.|||+++..++|++++++|.. .+.+.. .-..|.+|+++++ ++|++
T Consensus 154 r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gi~~~~~-~ly~t 229 (619)
T 3s94_A 154 RAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFED-ILYWT 229 (619)
T ss_dssp EEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE---EC---------CCCEEESSS-EEEEE
T ss_pred EEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc---cEEEEeCCCCCceEEEEeCC-EEEEe
Confidence 9998866555554 5788999999999888899999999999999988742 222322 2246999999876 78888
Q ss_pred EcCCCch
Q 016318 297 IHCRRSL 303 (391)
Q Consensus 297 ~~~~~~~ 303 (391)
......+
T Consensus 230 d~~~~~V 236 (619)
T 3s94_A 230 DWSTHSI 236 (619)
T ss_dssp CTTTCSE
T ss_pred cCCCCEE
Confidence 7655443
No 38
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=1.5e-15 Score=159.35 Aligned_cols=231 Identities=16% Similarity=0.171 Sum_probs=163.1
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..+|+.|++|+ +|+++.+++|.++++. .+..+.. +. ........+++.|+ +|+|||+
T Consensus 365 v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~--~~-----------------~~~~~~v~~i~~d~-~g~lWig 423 (781)
T 3v9f_A 365 VSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKE--NR-----------------ELLSNSVLCSLKDS-EGNLWFG 423 (781)
T ss_dssp EEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC------------------------CCCSBEEEEEECT-TSCEEEE
T ss_pred eEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccC--CC-----------------CCCCcceEEEEECC-CCCEEEE
Confidence 45788998998 9999988889999987 2322210 00 00134567888887 7999999
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
....||+++++++++++.+... +.....+..++.|++|+||+++. ++|++||+++++.+
T Consensus 424 t~~~Gl~~~~~~~~~~~~~~~~--~~~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 424 TYLGNISYYNTRLKKFQIIELE--KNELLDVRVFYEDKNKKIWIGTH-------------------AGVFVIDLASKKVI 482 (781)
T ss_dssp ETTEEEEEECSSSCEEEECCST--TTCCCCEEEEEECTTSEEEEEET-------------------TEEEEEESSSSSCC
T ss_pred eccCCEEEEcCCCCcEEEeccC--CCCCCeEEEEEECCCCCEEEEEC-------------------CceEEEeCCCCeEE
Confidence 8778999999999888776432 22234677889999999999984 47999999988776
Q ss_pred EeccC------CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCC----CceEeCCCCCEEEEEc
Q 016318 229 VLLRN------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYP----DNVRTNEKGEFWVAIH 298 (391)
Q Consensus 229 ~~~~~------~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p----~~i~~d~~G~lwva~~ 298 (391)
.+... ....+.++.+++|+ ||++. ..+.|.+++.++ ++.+.+....++| ..|..|++|++|+++.
T Consensus 483 ~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt-~~~Gl~~~~~~~---~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 483 HHYDTSNSQLLENFVRSIAQDSEGR-FWIGT-FGGGVGIYTPDM---QLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp EEECTTTSSCSCSCEEEEEECTTCC-EEEEE-SSSCEEEECTTC---CEEEEECTTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred ecccCcccccccceeEEEEEcCCCC-EEEEE-cCCCEEEEeCCC---CeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC
Confidence 55321 13566888999998 99984 445799987543 3344443323444 3578899999999986
Q ss_pred CCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEEE-CCEEEE
Q 016318 299 CRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEK-DGKLWM 377 (391)
Q Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~~-~g~Lyl 377 (391)
. +.+.++|++.+.+..|...+|.....+.++.++ +|+||+
T Consensus 558 ~---------------------------------------Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~ 598 (781)
T 3v9f_A 558 E---------------------------------------GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWA 598 (781)
T ss_dssp T---------------------------------------EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEE
T ss_pred C---------------------------------------CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEE
Confidence 4 334677877666777766667665566677665 489999
Q ss_pred ecCCCCeEEEEe
Q 016318 378 GSVLMPFVAVYD 389 (391)
Q Consensus 378 gs~~~~~i~~~~ 389 (391)
|+. ..|.+++
T Consensus 599 ~t~--~Gl~~~~ 608 (781)
T 3v9f_A 599 STN--TGISCYI 608 (781)
T ss_dssp ECS--SCEEEEE
T ss_pred EcC--CceEEEE
Confidence 984 3466654
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=1.6e-15 Score=139.03 Aligned_cols=185 Identities=14% Similarity=0.245 Sum_probs=133.8
Q ss_pred cccCcceEEE-ccCCCeeEEEec--CCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 67 QIQGPESMAF-DPLGRGPYTGVA--DGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 67 ~~~gPe~i~~-d~~G~~ly~~~~--~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
.+..|.++++ +++|+ +|++.. +++|.+++.+ ... ..... .....|.++++++ +
T Consensus 75 ~~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~~d~~g~~~--~~~~~-------------------~~~~~~~~i~~~~-~ 131 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGD-IIVTERSPTHQIQIYNQYGQFV--RKFGA-------------------TILQHPRGVTVDN-K 131 (286)
T ss_dssp CBSSEEEEEEETTTTE-EEEEECGGGCEEEEECTTSCEE--EEECT-------------------TTCSCEEEEEECT-T
T ss_pred cccCceEEEEEcCCCe-EEEEcCCCCCEEEEECCCCcEE--EEecC-------------------ccCCCceEEEEeC-C
Confidence 4568999999 57787 666663 7899999865 221 11100 1135689999998 7
Q ss_pred CcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEe
Q 016318 143 GDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD 221 (391)
Q Consensus 143 g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d 221 (391)
|+|||++...+ |+++++++..+..+... ..+..|++|+++++|++|++++. +++|.+||
T Consensus 132 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~ 191 (286)
T 1q7f_A 132 GRIIVVECKVMRVIIFDQNGNVLHKFGCS---KHLEFPNGVVVNDKQEIFISDNR-----------------AHCVKVFN 191 (286)
T ss_dssp SCEEEEETTTTEEEEECTTSCEEEEEECT---TTCSSEEEEEECSSSEEEEEEGG-----------------GTEEEEEE
T ss_pred CCEEEEECCCCEEEEEcCCCCEEEEeCCC---CccCCcEEEEECCCCCEEEEECC-----------------CCEEEEEc
Confidence 89999998754 99999886655544321 23457999999999999999854 47899999
Q ss_pred CCCCeEEEeccC--CCCcceEEEccCCCEEEEEeCCCC-eEEEEEeccccCccceeecc-cC-CCCCceEeCCCCCEEEE
Q 016318 222 PTTKQTTVLLRN--LQFPNGLSLSKDKSFFVFCEGSVG-RLHKYWLIGEKAGNLEAFAI-LP-GYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 222 ~~~~~~~~~~~~--~~~~ngia~~~d~~~l~v~et~~~-~I~~~~~~g~~~g~~~~~~~-~~-g~p~~i~~d~~G~lwva 296 (391)
++++....+... +..|.+|+++++|+ +|+++..++ +|.+++.+|. ....+.. .. ..|.+++++++|++|++
T Consensus 192 ~~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 192 YEGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQ---LISALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp TTCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSC---EEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred CCCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCCC---EEEEEcccCCCCcceeEEECCCCcEEEE
Confidence 876666555432 46899999999998 999988776 9999986542 1222322 11 24778999999999999
Q ss_pred Ec
Q 016318 297 IH 298 (391)
Q Consensus 297 ~~ 298 (391)
..
T Consensus 268 ~~ 269 (286)
T 1q7f_A 268 SK 269 (286)
T ss_dssp ET
T ss_pred CC
Confidence 53
No 40
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.68 E-value=5.6e-15 Score=143.35 Aligned_cols=193 Identities=18% Similarity=0.257 Sum_probs=137.0
Q ss_pred ccCcceEEEccCCCeeEEEecCC--EEEEEeCC-cee--EEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 68 IQGPESMAFDPLGRGPYTGVADG--RILFWDGL-KWT--DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~~g--~I~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
...|. ++++++|+.+|++..++ +|++++.. .+. .+... ......+|.++++++++
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~-------------------~~~~~~~p~~iav~p~~ 230 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQL-------------------GSTFSGKIGAVALDETE 230 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC-------------------CTTSCSCCCBCEECTTS
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeec-------------------cchhcCCcEEEEEeCCC
Confidence 45677 99999999888887755 89999876 322 22110 01125779999999867
Q ss_pred CcEEEEECCCCeEEEeCCCCeeEEceec-cCCCcccCCc-ceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 143 GDLYIADAYFGLMKVGPEGGLATSLATE-AEGVPLRFTN-DLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 143 g~L~V~d~~~gl~~~d~~~g~~~~~~~~-~~~~~~~~~~-~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
++||+++....|+++|++++..+.+... ..+.....|. ++++++ +|+||++++. +++|++
T Consensus 231 g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~ 293 (409)
T 3hrp_A 231 EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYK 293 (409)
T ss_dssp SEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEE
T ss_pred CeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEE
Confidence 8999987644599999998876555221 1111112345 999999 6899999965 578999
Q ss_pred EeCCCCeEEEec-cC--------------CCCcceEEEccCCCEEEEEeC-CCCeEEEEEeccccCccceeeccc-----
Q 016318 220 YDPTTKQTTVLL-RN--------------LQFPNGLSLSKDKSFFVFCEG-SVGRLHKYWLIGEKAGNLEAFAIL----- 278 (391)
Q Consensus 220 ~d~~~~~~~~~~-~~--------------~~~~ngia~~~d~~~l~v~et-~~~~I~~~~~~g~~~g~~~~~~~~----- 278 (391)
+++++. ...+. .. +..|+||+++++|+ |||+++ .+++|+++++.. +....+...
T Consensus 294 ~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~---G~v~~~~g~~~~~g 368 (409)
T 3hrp_A 294 ITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILD---GYVSTVAGQVDVAS 368 (409)
T ss_dssp ECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTT---TEEEEEEECTTCBS
T ss_pred EecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCC---CEEEEEeCCCCCCC
Confidence 998754 43332 22 56799999999999 999999 999999998432 222222211
Q ss_pred ----------CCCCCceEeCCCCCEEEEEcCCCc
Q 016318 279 ----------PGYPDNVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 279 ----------~g~p~~i~~d~~G~lwva~~~~~~ 302 (391)
-..|.+|++|++|++||+....++
T Consensus 369 ~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~ 402 (409)
T 3hrp_A 369 QIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKA 402 (409)
T ss_dssp CCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCE
T ss_pred cCCCChhceEeCCceEEEEcCCCCEEEEECCCCe
Confidence 135899999999999999887644
No 41
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=2.1e-15 Score=141.82 Aligned_cols=207 Identities=14% Similarity=0.185 Sum_probs=138.4
Q ss_pred cccccCcceEEEccCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 65 ~~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
.+.+..|.+|++|++|++++++..+++|.+++.+ ....+....... . . + ........|.+++++++++
T Consensus 87 ~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~--~-~--g------~~~~~~~~P~~ia~~~~~g 155 (329)
T 3fvz_A 87 KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM--Q-P--G------SDQNHFCQPTDVAVEPSTG 155 (329)
T ss_dssp TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTT--B-C--C------CSTTCCSSEEEEEECTTTC
T ss_pred CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccC--C-C--C------CCccccCCCcEEEEeCCCC
Confidence 3567799999999999966666778999999887 311111111000 0 0 0 0012256799999997579
Q ss_pred cEEEEEC-C-CCeEEEeCCCCeeEEceeccCC-----CcccCCcceeecCC-CCEEEEeCCCcccchhheeeecccCCCc
Q 016318 144 DLYIADA-Y-FGLMKVGPEGGLATSLATEAEG-----VPLRFTNDLDIDDE-GNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 144 ~L~V~d~-~-~gl~~~d~~~g~~~~~~~~~~~-----~~~~~~~~l~~d~~-G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
+|||+|. . ..|.++++++..+..+.....+ ..+..|++|+++++ |++|+++.. ++
T Consensus 156 ~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-----------------~~ 218 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-----------------NG 218 (329)
T ss_dssp CEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-----------------TT
T ss_pred eEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-----------------CC
Confidence 9999996 3 4499999876665555432221 34678999999998 899999965 57
Q ss_pred eEEEEeCCCCeEEEecc---CCCCcceEEEcc------CCCEEEEEeCCCCeEEEEEeccccCccceeec---ccCCCCC
Q 016318 216 RVLKYDPTTKQTTVLLR---NLQFPNGLSLSK------DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA---ILPGYPD 283 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~---~~~~~ngia~~~------d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~---~~~g~p~ 283 (391)
+|.+|++++++...... ....+.+++++| +++ +|+++....+|++++.... .....+. .....|.
T Consensus 219 ~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g--~~~~~~~~~~~~~~~p~ 295 (329)
T 3fvz_A 219 RIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSG--EIIDVFKPVRKHFDMPH 295 (329)
T ss_dssp EEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTC--CEEEEECCSSSCCSSEE
T ss_pred EEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCC--eEEEEEcCCCCccCCee
Confidence 99999998666544321 122445555555 776 7777777778999985432 1122222 1123689
Q ss_pred ceEeCCCCCEEEEEcCCCc
Q 016318 284 NVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 284 ~i~~d~~G~lwva~~~~~~ 302 (391)
+|++|++|++||+......
T Consensus 296 ~ia~~~dG~lyvad~~~~~ 314 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAHTNT 314 (329)
T ss_dssp EEEECTTSEEEEEESSSCC
T ss_pred EEEECCCCCEEEEECCCCE
Confidence 9999999999999877544
No 42
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.67 E-value=2.1e-14 Score=138.84 Aligned_cols=147 Identities=15% Similarity=0.210 Sum_probs=110.6
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCCC----eeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchh
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGG----LATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRN 203 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g----~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~ 203 (391)
...|.+|++|..++.||++|...+ |+++++++. ..+.+.. ..+..|.+|++|. .++||++|+.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~----~~~~~p~glavD~~~~~lY~~d~~------- 179 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV------- 179 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC----SSCSCEEEEEEETTTTEEEEEETT-------
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe----CCCCCcccEEEEecCCceEEEECC-------
Confidence 567999999976789999998765 999998763 2233221 1345799999997 7899999965
Q ss_pred heeeecccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCC-CCeEEEEEeccccCccceeec-ccCC
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGS-VGRLHKYWLIGEKAGNLEAFA-ILPG 280 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~-~~~I~~~~~~g~~~g~~~~~~-~~~g 280 (391)
+++|.+++++++..+++. ..+..|++|+++|.+.+||+++.. ..+|++++++|.. ...+. ..-.
T Consensus 180 ----------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~---~~~~~~~~l~ 246 (400)
T 3p5b_L 180 ----------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQ 246 (400)
T ss_dssp ----------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS---CEEEECSSCS
T ss_pred ----------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc---cEEEEECCCC
Confidence 478999999877766665 477889999999988889999976 4799999988742 22332 2224
Q ss_pred CCCceEeCC-CCCEEEEEcCC
Q 016318 281 YPDNVRTNE-KGEFWVAIHCR 300 (391)
Q Consensus 281 ~p~~i~~d~-~G~lwva~~~~ 300 (391)
.|.+|++|+ ++++|++....
T Consensus 247 ~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEEEeCCCEEEEEECCC
Confidence 799999995 56799987664
No 43
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.67 E-value=9.4e-15 Score=148.78 Aligned_cols=192 Identities=17% Similarity=0.122 Sum_probs=144.5
Q ss_pred cccCcceEEEcc-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 67 QIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 67 ~~~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
.+..|.+|++|+ +|+++|++...++|.+++.+ ..+.+.. ...+.|.||++|..++
T Consensus 347 ~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~----------------------~~~~~p~GlAvD~~~~ 404 (619)
T 3s94_A 347 DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVT----------------------AQIAHPDGIAVDWVAR 404 (619)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------------SSCSCCCEEEEETTTT
T ss_pred ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEE----------------------CCCCCcCceEEecccC
Confidence 467789999997 56667778888999999887 2232221 1247899999996578
Q ss_pred cEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEe
Q 016318 144 DLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD 221 (391)
Q Consensus 144 ~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d 221 (391)
+||++|...+ |.+++.++...+.+.. ..+..|++|++|+ +|.||++|.+. .++|.+.+
T Consensus 405 ~lY~tD~~~~~I~v~~~~G~~~~~l~~----~~l~~P~~iavdp~~G~ly~tD~g~----------------~~~I~r~~ 464 (619)
T 3s94_A 405 NLYWTDTGTDRIEVTRLNGTMRKILIS----EDLEEPRAIVLDPMVGYMYWTDWGE----------------IPKIERAA 464 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEEC----TTCCSEEEEEEETTTTEEEEEECSS----------------SCEEEEEE
T ss_pred cEEEEeCCCCcEEEEeCCCCeEEEEEE----CCCCCeeeEEEEcCCCcEEEecCCC----------------CCEEEEEc
Confidence 9999998866 8888888776555542 2367899999998 59999999651 36899998
Q ss_pred CCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCC
Q 016318 222 PTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 222 ~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
.++...+++. ..+..||||+++++++.|||+++..++|.+++++|.. ...++......|.+|+++.+ ++|++....
T Consensus 465 ~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~--~~~~~~~~l~~P~glav~~~-~ly~tD~~~ 541 (619)
T 3s94_A 465 LDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG--RRVLVEDKIPHIFGFTLLGD-YVYWTDWQR 541 (619)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC--CEEEEECCCCSSCCEEEETT-EEEEECTTS
T ss_pred cCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc--eEEEeccCCCCcEEEEEECC-EEEEeecCC
Confidence 8765555554 4688999999999888899999999999999998742 22222222347999999865 899998776
Q ss_pred Cch
Q 016318 301 RSL 303 (391)
Q Consensus 301 ~~~ 303 (391)
+.+
T Consensus 542 ~~I 544 (619)
T 3s94_A 542 RSI 544 (619)
T ss_dssp SCE
T ss_pred CeE
Confidence 554
No 44
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.67 E-value=9.7e-15 Score=153.37 Aligned_cols=224 Identities=13% Similarity=0.223 Sum_probs=156.8
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
.+++.|++|+.+|+++.+++|.++++. .+..+....+ . .......++..|+ +|+|||+.
T Consensus 409 ~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~----------------~--l~~~~v~~i~~d~-~g~lwigt 469 (795)
T 4a2l_A 409 KAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNS----------------Q--LVNENVYAILPDG-EGNLWLGT 469 (795)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTS----------------C--CSCSCEEEEEECS-SSCEEEEE
T ss_pred EEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCC----------------C--cCCCeeEEEEECC-CCCEEEEe
Confidence 478888888768999998899999987 4444421100 0 1134567888887 89999998
Q ss_pred CCCCeEEEeCCCCeeEEceecc--CCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 150 AYFGLMKVGPEGGLATSLATEA--EGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~--~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
. .||+++++++++++.+.... .+.....+..+..|++|++|+++. ++|++||+++++.
T Consensus 470 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------------------~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 470 L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------------------EGLSVFKQEGLDI 529 (795)
T ss_dssp S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------------------SCEEEEEEETTEE
T ss_pred c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------------------CceEEEeCCCCeE
Confidence 7 89999999998887764321 111224567889999999999983 4799999988877
Q ss_pred EEecc-----CC--CCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCc----eEeCCCCCEEEE
Q 016318 228 TVLLR-----NL--QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDN----VRTNEKGEFWVA 296 (391)
Q Consensus 228 ~~~~~-----~~--~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~----i~~d~~G~lwva 296 (391)
.+.. .+ ...++|+.+++|+ +|++.. + .|.+++.+. ++.+.+....|+|++ |..|++|++|++
T Consensus 530 -~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~-~-Gl~~~d~~~---~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~ 602 (795)
T 4a2l_A 530 -QKASILPVSNVTKLFTNCIYEASNGI-IWVGTR-E-GFYCFNEKD---KQIKRYNTTNGLPNNVVYGILEDSFGRLWLS 602 (795)
T ss_dssp -EECCCSCSCGGGGSCEEEEEECTTSC-EEEEES-S-CEEEEETTT---TEEEEECGGGTCSCSCEEEEEECTTSCEEEE
T ss_pred -EEecCCCCCCCCCCeeEEEEECCCCC-EEEEeC-C-CceeECCCC---CcEEEeCCCCCCchhheEEEEECCCCCEEEE
Confidence 4321 11 2345788888998 999843 3 899998543 445555444455654 788999999999
Q ss_pred EcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeece--eEE-EEECC
Q 016318 297 IHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAI--SEV-EEKDG 373 (391)
Q Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~i--s~~-~~~~g 373 (391)
+..+ +.+++++.+.+..|...+|.....+ .++ ...+|
T Consensus 603 t~~G----------------------------------------l~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G 642 (795)
T 4a2l_A 603 TNRG----------------------------------------ISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVG 642 (795)
T ss_dssp ETTE----------------------------------------EEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTS
T ss_pred cCCc----------------------------------------eEEEcCCCCcEEEcCCcCCCccccCccCceeECCCC
Confidence 8542 6678888777888877677544333 233 34468
Q ss_pred EEEEecCC
Q 016318 374 KLWMGSVL 381 (391)
Q Consensus 374 ~Lylgs~~ 381 (391)
+||+|+..
T Consensus 643 ~l~~g~~~ 650 (795)
T 4a2l_A 643 QMYFGGIN 650 (795)
T ss_dssp CEEEEETT
T ss_pred eEEEecCC
Confidence 99999865
No 45
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=2.4e-14 Score=150.15 Aligned_cols=231 Identities=14% Similarity=0.200 Sum_probs=158.9
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..+|+.|++|+ +|+|+.+++|.+++.. .+..+........ ..........+++.|+ +|+|||+
T Consensus 315 v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~~~v~~i~~d~-~g~lWig 379 (781)
T 3v9f_A 315 ARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMN-------------ESSLSNKVVSSVCDDG-QGKLWIG 379 (781)
T ss_dssp EEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCC-------------SSCCSSSCEEEEEECT-TSCEEEE
T ss_pred EEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccc-------------cCCCCCcceEEEEEcC-CCCEEEE
Confidence 35789999998 9999998899999876 4444432110000 0000124467888887 7999999
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
....||++++++++.++.+... .......+.+++.|++|+||+++.. ++|++||+++++.+
T Consensus 380 t~~~Gl~~~~~~~~~~~~~~~~-~~~~~~~v~~i~~d~~g~lWigt~~------------------~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 380 TDGGGINVFENGKRVAIYNKEN-RELLSNSVLCSLKDSEGNLWFGTYL------------------GNISYYNTRLKKFQ 440 (781)
T ss_dssp EBSSCEEEEETTEEEEECC------CCCSBEEEEEECTTSCEEEEETT------------------EEEEEECSSSCEEE
T ss_pred eCCCcEEEEECCCCeEEEccCC-CCCCCcceEEEEECCCCCEEEEecc------------------CCEEEEcCCCCcEE
Confidence 8888999999987766655211 1222345778889999999999853 68999999998887
Q ss_pred EeccC---CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccC------CCCCceEeCCCCCEEEEEcC
Q 016318 229 VLLRN---LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP------GYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 229 ~~~~~---~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~------g~p~~i~~d~~G~lwva~~~ 299 (391)
.+... ......++.+++++ ||++.. ..|++++.+. ++...+...+ ..+..|..|++|++|+++..
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~-lwigt~--~Gl~~~~~~~---~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~ 514 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKK-IWIGTH--AGVFVIDLAS---KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG 514 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSE-EEEEET--TEEEEEESSS---SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS
T ss_pred EeccCCCCCCeEEEEEECCCCC-EEEEEC--CceEEEeCCC---CeEEecccCcccccccceeEEEEEcCCCCEEEEEcC
Confidence 76532 23456788888887 999854 6899998654 2333332211 23456889999999999864
Q ss_pred CCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEEE-CCEEEEe
Q 016318 300 RRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEK-DGKLWMG 378 (391)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~~-~g~Lylg 378 (391)
. .+.+++++++.+..+...++.....+..+.++ +|+||+|
T Consensus 515 ~---------------------------------------Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 515 G---------------------------------------GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp S---------------------------------------CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred C---------------------------------------CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 2 26668888777777766566555566777765 4899999
Q ss_pred cC
Q 016318 379 SV 380 (391)
Q Consensus 379 s~ 380 (391)
+.
T Consensus 556 T~ 557 (781)
T 3v9f_A 556 TG 557 (781)
T ss_dssp ET
T ss_pred EC
Confidence 86
No 46
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.66 E-value=7.1e-15 Score=139.71 Aligned_cols=210 Identities=18% Similarity=0.195 Sum_probs=134.5
Q ss_pred cccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC---CC
Q 016318 67 QIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK---TG 143 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~---~g 143 (391)
.+..|++|+++++|+ +|++...|+|.+++....+.+..... .....+.|+||+++++ ++
T Consensus 29 ~l~~P~~ia~~pdG~-l~V~e~~g~I~~i~~g~~~~~~~~~v-----------------~~~g~~~p~gia~~pdf~~~g 90 (352)
T 2ism_A 29 GLEVPWALAFLPDGG-MLIAERPGRIRLFREGRLSTYAELSV-----------------YHRGESGLLGLALHPRFPQEP 90 (352)
T ss_dssp CCSCEEEEEECTTSC-EEEEETTTEEEEEETTEEEEEEECCC-----------------CCSTTCSEEEEEECTTTTTSC
T ss_pred CCCCceEEEEcCCCe-EEEEeCCCeEEEEECCCccEeecceE-----------------eecCCCCceeEEECCCCCCCC
Confidence 377999999999999 88888889999998334344432210 0112467999999984 47
Q ss_pred cEEEEECC------CCeEEEeCCCCee---EEceeccC--CCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccC
Q 016318 144 DLYIADAY------FGLMKVGPEGGLA---TSLATEAE--GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAE 212 (391)
Q Consensus 144 ~L~V~d~~------~gl~~~d~~~g~~---~~~~~~~~--~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~ 212 (391)
.|||++.. ..|.+++.+++.+ +.+..... ......+++|++++||+||+++...... ....+ ...
T Consensus 91 ~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~--~~~~d--~~~ 166 (352)
T 2ism_A 91 YVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYER--ELAQD--LAS 166 (352)
T ss_dssp EEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCG--GGGGC--TTC
T ss_pred EEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCC--ccccC--CCC
Confidence 99999874 4599998876532 33333222 2234578999999999999997432110 00000 113
Q ss_pred CCceEEEEeCCC-------------CeEEEeccCCCCcceEEEcc-CCCEEEEEeCCCCe--------EEEEEeccccCc
Q 016318 213 DTGRVLKYDPTT-------------KQTTVLLRNLQFPNGLSLSK-DKSFFVFCEGSVGR--------LHKYWLIGEKAG 270 (391)
Q Consensus 213 ~~g~l~~~d~~~-------------~~~~~~~~~~~~~ngia~~~-d~~~l~v~et~~~~--------I~~~~~~g~~~g 270 (391)
..|+|+++++++ ...+++..++..|+|+++++ +++ ||++|...++ |.++. .|..-|
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~dei~~i~-~G~nyG 244 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGE-LFSSEHGPSGEQGYGHDEVNLIV-PGGNYG 244 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCC-EEEEEECC------CCCEEEEEC-TTCBCC
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCC-EEEEEcCCCCCCCCCCeEEEEec-cCCcCC
Confidence 358999999875 24456667788899999999 555 9999987766 55543 222111
Q ss_pred c------------ceeecccC--CCCCceEeCCCCCEEEEEcCCC
Q 016318 271 N------------LEAFAILP--GYPDNVRTNEKGEFWVAIHCRR 301 (391)
Q Consensus 271 ~------------~~~~~~~~--g~p~~i~~d~~G~lwva~~~~~ 301 (391)
- .......+ ..|.++++ .+|++|++.....
T Consensus 245 wp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~ 288 (352)
T 2ism_A 245 WPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQ 288 (352)
T ss_dssp TTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTT
T ss_pred CCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCC
Confidence 0 01111111 24778888 5788999876543
No 47
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.63 E-value=4.7e-14 Score=146.79 Aligned_cols=147 Identities=15% Similarity=0.205 Sum_probs=110.9
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCCCe----eEEceeccCCCcccCCcceeecCC-CCEEEEeCCCcccchh
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGGL----ATSLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRN 203 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~----~~~~~~~~~~~~~~~~~~l~~d~~-G~ly~td~~~~~~~~~ 203 (391)
...|.+|+++..+++||++|...+ |++++.++.. .+.+. ...+..|.+||+|.. ++||++|+.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi----~~~l~~P~GLAvD~~~~~LY~tD~~------- 491 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----SRDIQAPDGLAVDWIHSNIYWTDSV------- 491 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE----CSSCSCCCEEEEETTTTEEEEEETT-------
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE----ecCCCCcceeeeeecCCcEEEEecC-------
Confidence 567899999986789999999866 9999987632 22222 123568999999975 489999965
Q ss_pred heeeecccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCC-CeEEEEEeccccCccceeec-ccCC
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFA-ILPG 280 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~-~~I~~~~~~g~~~g~~~~~~-~~~g 280 (391)
+++|.+++.+++..+++. ..+..|+||+++|.+..|||++... .+|++++++|.. ..++. ..-.
T Consensus 492 ----------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~ 558 (791)
T 3m0c_C 492 ----------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQ 558 (791)
T ss_dssp ----------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EEEEECSSCS
T ss_pred ----------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc---eEEEEeCCCC
Confidence 579999999877766665 5678899999999887899999876 899999988742 23333 2224
Q ss_pred CCCceEeC-CCCCEEEEEcCC
Q 016318 281 YPDNVRTN-EKGEFWVAIHCR 300 (391)
Q Consensus 281 ~p~~i~~d-~~G~lwva~~~~ 300 (391)
.|.+|++| .+|+||++....
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTT
T ss_pred CceEEEEecCCCeEEEEeCCC
Confidence 79999999 567799997654
No 48
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.63 E-value=1e-13 Score=129.81 Aligned_cols=148 Identities=16% Similarity=0.179 Sum_probs=111.6
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCCCee-EEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhhee
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~-~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~ 206 (391)
...|.++.+|..+++||++|...+ |++++++++.. +.+.. ..+..|.++++|. .|+||++|+.
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~----~~l~~p~glavd~~~g~ly~~d~~---------- 99 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----SGLLSPDGLACDWLGEKLYWTDSE---------- 99 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE----ECCSCCCEEEEETTTTEEEEEETT----------
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc----CCCCCccEEEEEcCCCeEEEEECC----------
Confidence 356889999976789999998765 99999987632 22211 1245799999996 7899999965
Q ss_pred eecccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCC-CCeEEEEEeccccCccceeec-ccCCCCC
Q 016318 207 LVFSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGS-VGRLHKYWLIGEKAGNLEAFA-ILPGYPD 283 (391)
Q Consensus 207 ~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~-~~~I~~~~~~g~~~g~~~~~~-~~~g~p~ 283 (391)
.++|.++++++...+++. ..+..|+||+++|.+..||+++.. ..+|+|++++|.. .+.+. ..-..|+
T Consensus 100 -------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pn 169 (318)
T 3sov_A 100 -------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINSEIYWPN 169 (318)
T ss_dssp -------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEE
T ss_pred -------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEECCCCCcc
Confidence 478999998876655554 678899999999987789999975 6899999988742 22332 2124699
Q ss_pred ceEeCC-CCCEEEEEcCCC
Q 016318 284 NVRTNE-KGEFWVAIHCRR 301 (391)
Q Consensus 284 ~i~~d~-~G~lwva~~~~~ 301 (391)
+|++|+ ++++|++.....
T Consensus 170 glavd~~~~~lY~aD~~~~ 188 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLN 188 (318)
T ss_dssp EEEEETTTTEEEEEETTTT
T ss_pred EEEEeccCCEEEEEECCCC
Confidence 999997 667999986643
No 49
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.63 E-value=4.7e-14 Score=146.81 Aligned_cols=194 Identities=15% Similarity=0.157 Sum_probs=141.7
Q ss_pred cccCcceEEEcc-CCCeeEEEecCCEEEEEeCCcee---EEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 67 QIQGPESMAFDP-LGRGPYTGVADGRILFWDGLKWT---DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 67 ~~~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
.+..|.+|++|. +++++|++..+++|++++.+... .... ........|.||++|..+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~-------------------vi~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-------------------VISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE-------------------EECSSCSCCCEEEEETTT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeE-------------------EEecCCCCcceeeeeecC
Confidence 367899999997 56677788888999999776210 0000 111125789999999756
Q ss_pred CcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCC-CCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 143 GDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 143 g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~-G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
++||++|...+ |.+++.++...+.+... .+..|++|++|+. |.||++|.+. .++|.+.
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~~----~l~~P~gIaVDp~~g~LYwtD~g~----------------~~~I~~~ 542 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKG 542 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECSS----------------SCEEEEE
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEeC----CCCCcceEEEecCCCCEEEecCCC----------------CCeEEEE
Confidence 79999999866 99999998776666432 2457999999984 8999999651 2689999
Q ss_pred eCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc---CCCCCceEeCCCCCEEEE
Q 016318 221 DPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL---PGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 221 d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~---~g~p~~i~~d~~G~lwva 296 (391)
+.++...+++. ..+..|+||++++.+..|||+++..++|++++++|.. ...+... -..|.+|+++. ++||++
T Consensus 543 ~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~---~~~v~~~~~~l~~P~glav~~-~~lYwt 618 (791)
T 3m0c_C 543 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWT 618 (791)
T ss_dssp ETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEE
T ss_pred ecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc---eEEEecCCCccCCCCEEEEeC-CEEEEE
Confidence 98876666554 5678999999998888899999999999999998742 2333221 12467788854 478888
Q ss_pred EcCCCch
Q 016318 297 IHCRRSL 303 (391)
Q Consensus 297 ~~~~~~~ 303 (391)
....+.+
T Consensus 619 D~~~~~I 625 (791)
T 3m0c_C 619 DIINEAI 625 (791)
T ss_dssp ETTTTEE
T ss_pred ECCCCEE
Confidence 8766554
No 50
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.62 E-value=2.3e-15 Score=155.49 Aligned_cols=213 Identities=15% Similarity=0.130 Sum_probs=143.9
Q ss_pred cccCcceEEEccC-CCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 67 QIQGPESMAFDPL-GRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 67 ~~~gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
.+..|++|+++++ +.++|+...+++|++++.+.... ...... ........|.||++|..+++|
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~----~~~~~~------------~i~~~~~~P~glavD~~~g~L 467 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG----VSSYDT------------VISRDIQAPDGLAVDWIHSNI 467 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-----CCCCC------------BCCSCC--CCCEECCCSSSBC
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCC----CcceEE------------EEeCCCCCcceEEEEeeCCcE
Confidence 4678999999975 45556667778999997652100 000000 111124679999999557899
Q ss_pred EEEECCC-CeEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 146 YIADAYF-GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 146 ~V~d~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
|++|... .|.++++++..++.+... .+..|++|++|+ .|.||+++.+. .++|.+++.+
T Consensus 468 Y~tD~~~~~I~v~d~dg~~~~~l~~~----~~~~P~giavDp~~g~ly~td~~~----------------~~~I~~~~~d 527 (699)
T 1n7d_A 468 YWTDSVLGTVSVADTKGVKRKTLFRE----QGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLN 527 (699)
T ss_dssp EECCTTTSCEEEEBSSSCCEEEECCC----SSCCCCCEECCSSSSCCEECCCSS----------------SCCEEBCCSS
T ss_pred EEEeccCCeEEEEecCCCceEEEEeC----CCCCcceEEEccCCCcEEEcccCC----------------CCeEEEEeCC
Confidence 9999875 499999998766655321 245799999998 57999998541 3688888876
Q ss_pred CCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc---cCCCCCceEeCCCCCEEEEEcC
Q 016318 224 TKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI---LPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 224 ~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~---~~g~p~~i~~d~~G~lwva~~~ 299 (391)
+...+++. ..+..||||+++++++.|||+++..++|++++++|. ..+++.. ..+.|.+|+++.+ ++|++...
T Consensus 528 G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~glavd~~-~lywtd~~ 603 (699)
T 1n7d_A 528 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFED-KVFWTDII 603 (699)
T ss_dssp SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCSSSCSSCCCCEEETT-EEEEECST
T ss_pred CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecCCcCCCceEeEEECC-EEEEEeCC
Confidence 55544443 567899999999988889999999999999998873 2333332 1247999999876 56666665
Q ss_pred CCchhhhhhhcCccceeeeeecCc
Q 016318 300 RRSLYSHLMALYPKIRHFLLKLPI 323 (391)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~~~~l~~ 323 (391)
...+.. ..+..++.+..+..
T Consensus 604 ~~~V~~----~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 604 NEAIFS----ANRLTGSDVNLLAE 623 (699)
T ss_dssp TTCEEE----EETTTEEEEECCCT
T ss_pred CCeEEE----EEccCCCceEEeec
Confidence 544322 12334555555544
No 51
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.61 E-value=2.7e-14 Score=133.71 Aligned_cols=185 Identities=16% Similarity=0.202 Sum_probs=129.1
Q ss_pred cCcceEEEcc-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 69 QGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 69 ~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
..|.+|++++ +|+ +|++...++|++++.+ .++.+..... .....+|.++++++++|+|
T Consensus 80 ~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~------------------~~~~~~p~~i~~d~~~G~l 140 (322)
T 2fp8_A 80 GRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVD------------------GVPFKWLYAVTVDQRTGIV 140 (322)
T ss_dssp CCEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEET------------------TEECSCEEEEEECTTTCCE
T ss_pred CCCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCC------------------CCcccccceEEEecCCCEE
Confidence 4699999997 777 8888777789999876 2333322110 0124578999999735799
Q ss_pred EEEECC------------------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhhee
Q 016318 146 YIADAY------------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 146 ~V~d~~------------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~ 206 (391)
||+|.. .+|+++|+++++++.+... +..|++|+++++|+ ||++++.
T Consensus 141 ~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-----~~~p~gia~~~dg~~lyv~d~~---------- 205 (322)
T 2fp8_A 141 YFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-----LHVPGGAEVSADSSFVLVAEFL---------- 205 (322)
T ss_dssp EEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-----ESCCCEEEECTTSSEEEEEEGG----------
T ss_pred EEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-----CccCcceEECCCCCEEEEEeCC----------
Confidence 999965 2399999998877665432 45799999999986 9999854
Q ss_pred eecccCCCceEEEEeCCC---CeEEEeccCCCCcceEEEccCCCEEEEEeCC----------CCeEEEEEeccccCccce
Q 016318 207 LVFSAEDTGRVLKYDPTT---KQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS----------VGRLHKYWLIGEKAGNLE 273 (391)
Q Consensus 207 ~~~~~~~~g~l~~~d~~~---~~~~~~~~~~~~~ngia~~~d~~~l~v~et~----------~~~I~~~~~~g~~~g~~~ 273 (391)
+++|.+|+.++ ++.+.+.. +..|+|++++++|+ +||++.. .++|.+++.+|. ..+
T Consensus 206 -------~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~---~~~ 273 (322)
T 2fp8_A 206 -------SHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGN---ILE 273 (322)
T ss_dssp -------GTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSC---EEE
T ss_pred -------CCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCC---EEE
Confidence 46899999875 34444433 22299999999998 9999765 467999976542 122
Q ss_pred eecccC----CCCCceEeCCCCCEEEEEcCC
Q 016318 274 AFAILP----GYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 274 ~~~~~~----g~p~~i~~d~~G~lwva~~~~ 300 (391)
.+.... ..|.+++. .+|++||+....
T Consensus 274 ~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~ 303 (322)
T 2fp8_A 274 VIPLPPPFAGEHFEQIQE-HDGLLYIGTLFH 303 (322)
T ss_dssp EEECCTTTTTSCCCEEEE-ETTEEEEECSSC
T ss_pred EEECCCCCccccceEEEE-eCCEEEEeecCC
Confidence 232211 24666766 478899987553
No 52
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.59 E-value=1.3e-13 Score=127.53 Aligned_cols=196 Identities=13% Similarity=0.083 Sum_probs=128.3
Q ss_pred ccCcceEEEccCCCeeEEEe-cCCEEEEEeCC-c-eeEEEeecCCCcccCCCCCCccccccccCccCccceEEE---ecC
Q 016318 68 IQGPESMAFDPLGRGPYTGV-ADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF---DKK 141 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~-~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~---d~~ 141 (391)
-.-||++.+|++...+|++. .+|+|.+++++ + ...+ ... ... .. -...-.|.||.+ |+
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~-~~s--~~-----------g~~~~~~sGl~~~~~D~- 75 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VID-GAS--SN-----------GDGEQQMSGLSLLTHDN- 75 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCT-TTC--CS-----------SCCSEEEEEEEESSSSS-
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecC-Ccc--cc-----------CCCcceeeEEEEeccCC-
Confidence 35799999997655588777 78999999987 2 2333 111 000 00 001235789999 78
Q ss_pred CCcEEE-EEC-------------CCCeEEEeCC---CCeeEEceec---cC------CCcccCCcceeecCCCCEEEEeC
Q 016318 142 TGDLYI-ADA-------------YFGLMKVGPE---GGLATSLATE---AE------GVPLRFTNDLDIDDEGNVYFTDS 195 (391)
Q Consensus 142 ~g~L~V-~d~-------------~~gl~~~d~~---~g~~~~~~~~---~~------~~~~~~~~~l~~d~~G~ly~td~ 195 (391)
+++||| ++. ...|+++|.. +++....... .+ +.....+|+|++|++|++|++++
T Consensus 76 ~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s 155 (334)
T 2p9w_A 76 SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA 155 (334)
T ss_dssp CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Confidence 699998 442 2449999988 6654433221 11 22345699999999999999985
Q ss_pred CCcccchhheeeecccCCC-ceEEEEeCCCCeEEEecc------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecccc
Q 016318 196 STNYQRRNFMQLVFSAEDT-GRVLKYDPTTKQTTVLLR------NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK 268 (391)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~-g~l~~~d~~~~~~~~~~~------~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~ 268 (391)
. . +.|+++++++.....+.. ....+|||+++||++.|+++++ .++|+++++..+.
T Consensus 156 ~-----------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv 217 (334)
T 2p9w_A 156 L-----------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPY 217 (334)
T ss_dssp E-----------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSS
T ss_pred C-----------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCc
Confidence 3 3 679999998775555431 1235789999999999999988 8999999987321
Q ss_pred Cccceee--c---ccCCCCCce-EeCCCCCE-EEEEc
Q 016318 269 AGNLEAF--A---ILPGYPDNV-RTNEKGEF-WVAIH 298 (391)
Q Consensus 269 ~g~~~~~--~---~~~g~p~~i-~~d~~G~l-wva~~ 298 (391)
.-....- . .+ ..|++| ....+|++ +|+..
T Consensus 218 ~~~v~~~~~G~~~~~-~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 218 AWPEPVKINGDFGTL-SGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp CCCEECEESSCCCCC-TTEEEEEEEEETTEEEEEEEE
T ss_pred ceeecccccCCcccc-cCcccccccccCCEEEEEEcC
Confidence 1001100 0 11 247885 66678886 66554
No 53
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.59 E-value=7.4e-13 Score=134.96 Aligned_cols=147 Identities=16% Similarity=0.253 Sum_probs=115.0
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheee
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~ 207 (391)
...|.||++|+.+++||++|...+ |++++++++..+.+... .+..|.+||+|. .|+||++|+.
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~----g~~~P~GlAvD~~~~~LY~tD~~----------- 100 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF----GLDYPEGMAVDWLGKNLYWADTG----------- 100 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SCSCCCEEEEETTTTEEEEEETT-----------
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC----CCCCcceEEEEeCCCEEEEEECC-----------
Confidence 457999999987889999998865 99999988766655432 235799999996 5789999965
Q ss_pred ecccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCC-CCeEEEEEeccccCccceeecccCCCCCce
Q 016318 208 VFSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGS-VGRLHKYWLIGEKAGNLEAFAILPGYPDNV 285 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~-~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i 285 (391)
.++|.+.+.+++..+++. ..+..|++|+++|.+..||+++.. ..+|+|++++|.. .+.+.+.-..|.+|
T Consensus 101 ------~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~---~~~l~~~~~~P~Gl 171 (628)
T 4a0p_A 101 ------TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE---RTTLVPNVGRANGL 171 (628)
T ss_dssp ------TTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSCSSEEEE
T ss_pred ------CCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc---eEEEECCCCCcceE
Confidence 478999998877666655 678899999999977779999975 6899999998843 23333322469999
Q ss_pred EeCCC-CCEEEEEcCC
Q 016318 286 RTNEK-GEFWVAIHCR 300 (391)
Q Consensus 286 ~~d~~-G~lwva~~~~ 300 (391)
++|.+ +++|++....
T Consensus 172 alD~~~~~LY~aD~~~ 187 (628)
T 4a0p_A 172 TIDYAKRRLYWTDLDT 187 (628)
T ss_dssp EEETTTTEEEEEETTT
T ss_pred EEccccCEEEEEECCC
Confidence 99985 6699988764
No 54
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.59 E-value=6.2e-14 Score=136.88 Aligned_cols=190 Identities=13% Similarity=0.137 Sum_probs=130.1
Q ss_pred ccccCcceEEEccCCCeeEEEecC-----CEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEe
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVAD-----GRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFD 139 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~~-----g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d 139 (391)
+.+..|.+|+++++|+ +|++... ..++.++.. .+..- .......+|.++++|
T Consensus 179 ~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~---------------------~~~~~~~~P~giavd 236 (433)
T 4hw6_A 179 TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTER---------------------LSLCNARGAKTCAVH 236 (433)
T ss_dssp CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCE---------------------EEEEECSSBCCCEEC
T ss_pred cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecc---------------------ccccccCCCCEEEEe
Confidence 3567899999999999 6666543 245555443 11100 000125779999999
Q ss_pred cCCCcEEEEECCCC-eEEEeCCCCee-EEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCce
Q 016318 140 KKTGDLYIADAYFG-LMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGR 216 (391)
Q Consensus 140 ~~~g~L~V~d~~~g-l~~~d~~~g~~-~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~ 216 (391)
+++|+|||+|...+ |++++++++.+ +.+..... ...+.+|+++++|+ ||++++. +++
T Consensus 237 ~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~---~~~~~~ia~dpdG~~LYvad~~-----------------~~~ 296 (433)
T 4hw6_A 237 PQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT---KGSNFHIVWHPTGDWAYIIYNG-----------------KHC 296 (433)
T ss_dssp TTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC---CSSCEEEEECTTSSEEEEEETT-----------------TTE
T ss_pred CCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC---CCCcccEEEeCCCCEEEEEeCC-----------------CCE
Confidence 86799999998866 99999997776 44432211 23456799999997 9999965 467
Q ss_pred EEEEeCC--CCeE---EEec---------------cCCCCcceEEE---------ccCCCEEEEEeCCCCeEEEEEeccc
Q 016318 217 VLKYDPT--TKQT---TVLL---------------RNLQFPNGLSL---------SKDKSFFVFCEGSVGRLHKYWLIGE 267 (391)
Q Consensus 217 l~~~d~~--~~~~---~~~~---------------~~~~~~ngia~---------~~d~~~l~v~et~~~~I~~~~~~g~ 267 (391)
|++++.+ ++++ ..+. ..+..|.|+++ +++++ |||+++.+++|++++.+|.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTPEGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECTTSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECCCCC
Confidence 8886643 4432 1221 13567999999 77776 9999999999999986542
Q ss_pred cCccceeecc------------------cCCCCCceEeC-CCCCEEEEEcCCCc
Q 016318 268 KAGNLEAFAI------------------LPGYPDNVRTN-EKGEFWVAIHCRRS 302 (391)
Q Consensus 268 ~~g~~~~~~~------------------~~g~p~~i~~d-~~G~lwva~~~~~~ 302 (391)
...++. .-..|.+|++| ++|++||+...+++
T Consensus 376 ----v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r 425 (433)
T 4hw6_A 376 ----VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHR 425 (433)
T ss_dssp ----EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred ----EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCE
Confidence 222110 01258899999 89999999887643
No 55
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=3.7e-13 Score=123.94 Aligned_cols=182 Identities=14% Similarity=0.168 Sum_probs=127.0
Q ss_pred ccCcceEEEccCCCeeEEEec-CCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 68 IQGPESMAFDPLGRGPYTGVA-DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
...|.+++++++|+ +|++.. +++|.+++.. .+..+.... ......+|.++++++ +|+
T Consensus 68 ~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~~~~~~~------------------~~~~~~~~~~i~~d~-~G~ 127 (296)
T 3e5z_A 68 SHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWESIADSF------------------EGKKLNSPNDVCLAP-DGS 127 (296)
T ss_dssp CSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEEEEECEE------------------TTEECCCCCCEEECT-TSC
T ss_pred CCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEEEEeecc------------------CCCCCCCCCCEEECC-CCC
Confidence 34689999999999 566554 5899999984 444442211 011245788999998 899
Q ss_pred EEEEEC------------------CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhhee
Q 016318 145 LYIADA------------------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 145 L~V~d~------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~ 206 (391)
||++|. ..+|++++++ ++++.+.. ....|++++++++|+++++++.
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----~~~~~~gi~~s~dg~~lv~~~~---------- 191 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR-----DRVKPNGLAFLPSGNLLVSDTG---------- 191 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC-----CCSSEEEEEECTTSCEEEEETT----------
T ss_pred EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec-----CCCCCccEEECCCCCEEEEeCC----------
Confidence 999864 2369999988 65555432 2357899999999987788754
Q ss_pred eecccCCCceEEEEeCC-CCeE----EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCC
Q 016318 207 LVFSAEDTGRVLKYDPT-TKQT----TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGY 281 (391)
Q Consensus 207 ~~~~~~~~g~l~~~d~~-~~~~----~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~ 281 (391)
.++|++|+.+ +++. +.+......|.+++++++|+ +|++. .++|.+++.+|. ....+. .+..
T Consensus 192 -------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~---~~~~~~-~~~~ 257 (296)
T 3e5z_A 192 -------DNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGD---ELGRVL-TPQT 257 (296)
T ss_dssp -------TTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSC---EEEEEE-CSSC
T ss_pred -------CCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCC---EEEEEE-CCCC
Confidence 4689998875 4554 23322345789999999998 99997 689999986542 122232 3323
Q ss_pred CCceEe-CCCCC-EEEEEcC
Q 016318 282 PDNVRT-NEKGE-FWVAIHC 299 (391)
Q Consensus 282 p~~i~~-d~~G~-lwva~~~ 299 (391)
|.++++ +++|+ +|+++..
T Consensus 258 ~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp CCEEEEESTTSCEEEEEETT
T ss_pred ceeEEEECCCCCEEEEEcCC
Confidence 889988 46765 9998754
No 56
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=4.4e-13 Score=125.94 Aligned_cols=185 Identities=16% Similarity=0.114 Sum_probs=128.6
Q ss_pred cCcceEEEccCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
..|++++++ +++ +|+... ++.|.++|....+...... ....|.++++++ +++|||
T Consensus 44 ~~~~~i~~~-~~~-lyv~~~~~~~v~viD~~t~~~~~~i~---------------------~~~~p~~i~~~~-~g~lyv 99 (328)
T 3dsm_A 44 DVAQSMVIR-DGI-GWIVVNNSHVIFAIDINTFKEVGRIT---------------------GFTSPRYIHFLS-DEKAYV 99 (328)
T ss_dssp SCEEEEEEE-TTE-EEEEEGGGTEEEEEETTTCCEEEEEE---------------------CCSSEEEEEEEE-TTEEEE
T ss_pred ccceEEEEE-CCE-EEEEEcCCCEEEEEECcccEEEEEcC---------------------CCCCCcEEEEeC-CCeEEE
Confidence 358899986 455 666655 5889999987333322111 146699999987 679999
Q ss_pred EECC-CCeEEEeCCCCeeEEceeccC-CCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCC
Q 016318 148 ADAY-FGLMKVGPEGGLATSLATEAE-GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 148 ~d~~-~gl~~~d~~~g~~~~~~~~~~-~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
++.+ ..|.++|++++++........ ..+...|.+|++ .++.+|+++.+ ..++|.++|++++
T Consensus 100 ~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~ 162 (328)
T 3dsm_A 100 TQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETD 162 (328)
T ss_dssp EEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTT
T ss_pred EECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCC
Confidence 9944 569999999987654322111 122347899999 57899999842 1368999999998
Q ss_pred eEEEeccCCCCcceEEEccCCCEEEEEeCCC----------CeEEEEEeccccCccceeecccC--CCCCceEeCCCCC-
Q 016318 226 QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV----------GRLHKYWLIGEKAGNLEAFAILP--GYPDNVRTNEKGE- 292 (391)
Q Consensus 226 ~~~~~~~~~~~~ngia~~~d~~~l~v~et~~----------~~I~~~~~~g~~~g~~~~~~~~~--g~p~~i~~d~~G~- 292 (391)
+..........|+++++++||+ +|++.... ++|++++.+. ++.......+ ..|.+|+++++|+
T Consensus 163 ~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 163 KVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAET---FTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp EEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTT---TEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred eEEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCC---CeEEEEEecCCCCCceeEEEecCCCE
Confidence 8765555556799999999998 88886654 7899998653 2222122233 2699999998776
Q ss_pred EEEEEc
Q 016318 293 FWVAIH 298 (391)
Q Consensus 293 lwva~~ 298 (391)
+|++..
T Consensus 239 lyv~~~ 244 (328)
T 3dsm_A 239 LYWINN 244 (328)
T ss_dssp EEEESS
T ss_pred EEEEcc
Confidence 777643
No 57
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=1.1e-13 Score=134.91 Aligned_cols=190 Identities=14% Similarity=0.176 Sum_probs=129.3
Q ss_pred cccCcceEEEccCCCeeEEEecC-----CEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec
Q 016318 67 QIQGPESMAFDPLGRGPYTGVAD-----GRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~~ly~~~~~-----g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~ 140 (391)
.+..|.+|++|++|+.+|++... ..++.++.+ .+..... . .....|.++++++
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~--------------------l-~~~~~p~giavdp 235 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITE--------------------L-TKGQNCNGAETHP 235 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEE--------------------E-EECSSCCCEEECT
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeee--------------------e-ccCCCceEEEEeC
Confidence 46789999999999966666542 245656554 2210000 0 0246799999998
Q ss_pred CCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEE
Q 016318 141 KTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVL 218 (391)
Q Consensus 141 ~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~ 218 (391)
++|+|||+|...+ |++++++++....+..... ...|++|+++++|+ ||+++.. +++|+
T Consensus 236 ~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~---~~~P~gia~~pdG~~lyv~d~~-----------------~~~I~ 295 (430)
T 3tc9_A 236 INGELYFNSWNAGQVFRYDFTTQETTPLFTIQD---SGWEFHIQFHPSGNYAYIVVVN-----------------QHYIL 295 (430)
T ss_dssp TTCCEEEEETTTTEEEEEETTTTEEEEEEECSS---SSCCEEEEECTTSSEEEEEETT-----------------TTEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC---CCcceeEEEcCCCCEEEEEECC-----------------CCEEE
Confidence 6789999998865 9999999887644432211 24799999999998 9999965 46777
Q ss_pred EEeCC--CCeE---EEec---------------cCCCCcc-eEEEc--------cCCCEEEEEeCCCCeEEEEEeccccC
Q 016318 219 KYDPT--TKQT---TVLL---------------RNLQFPN-GLSLS--------KDKSFFVFCEGSVGRLHKYWLIGEKA 269 (391)
Q Consensus 219 ~~d~~--~~~~---~~~~---------------~~~~~~n-gia~~--------~d~~~l~v~et~~~~I~~~~~~g~~~ 269 (391)
+++.+ ++++ ..+. ..+..|. |++++ ++++ |||+++.+++|.+++.+|
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~~n~~I~~i~~~G--- 371 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDRENHCIRILTPQG--- 371 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEGGGTEEEEECTTS---
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEECCCcEEEEECCCC---
Confidence 76544 2332 1111 1255788 88885 3455 999999999999998554
Q ss_pred ccceeeccc---------C---------CCCCceEeCC-CCCEEEEEcCCCc
Q 016318 270 GNLEAFAIL---------P---------GYPDNVRTNE-KGEFWVAIHCRRS 302 (391)
Q Consensus 270 g~~~~~~~~---------~---------g~p~~i~~d~-~G~lwva~~~~~~ 302 (391)
....+... . ..|.+|++|+ +|+|||+...+++
T Consensus 372 -~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r 422 (430)
T 3tc9_A 372 -RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRR 422 (430)
T ss_dssp -EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred -cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCe
Confidence 22222210 1 2589999998 6899999877543
No 58
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.57 E-value=4.8e-12 Score=118.58 Aligned_cols=194 Identities=13% Similarity=0.152 Sum_probs=132.1
Q ss_pred cCcceEEEccCCCeeEEEec-------CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC
Q 016318 69 QGPESMAFDPLGRGPYTGVA-------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~-------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~ 141 (391)
.+|.+++++++|+.+|++.. ++.|..++....+..... .....|.+++++++
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~---------------------~~~~~~~~~~~s~d 99 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI---------------------HNDLKPFGATINNT 99 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE---------------------EESSCCCSEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE---------------------ecCCCcceEEECCC
Confidence 47899999999998888874 468999987632222111 01356889999994
Q ss_pred CCcEEEEECCCC-eEEEeCCCCeeEEceeccCCC-----cccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCC
Q 016318 142 TGDLYIADAYFG-LMKVGPEGGLATSLATEAEGV-----PLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 142 ~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~-----~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
++.+|+++...+ |..+|.++++.........+. ....|.+++++++|+ +|+++.+ .+
T Consensus 100 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~ 163 (353)
T 3vgz_A 100 TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KE 163 (353)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SS
T ss_pred CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC----------------CC
Confidence 445999988644 999999988754332221111 112478899999986 7887732 24
Q ss_pred ceEEEEeCCCCeEEEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc----cCCCCCceEeCC
Q 016318 215 GRVLKYDPTTKQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI----LPGYPDNVRTNE 289 (391)
Q Consensus 215 g~l~~~d~~~~~~~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~----~~g~p~~i~~d~ 289 (391)
+.|+.+|.++++...... ....+++++++||++.+|++.. ++.|+.++....+. ...+.. ....+.++++++
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKI--LSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEE--EEEEECCCSSSCCCEEEEEEET
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeE--EEEEEcCCCCCCcccceEEECC
Confidence 689999999888766555 4456899999999999999854 67899998654211 111111 123456799999
Q ss_pred CCC-EEEEEcCCCc
Q 016318 290 KGE-FWVAIHCRRS 302 (391)
Q Consensus 290 ~G~-lwva~~~~~~ 302 (391)
+|+ +|++......
T Consensus 241 dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 241 ARQRAFITDSKAAE 254 (353)
T ss_dssp TTTEEEEEESSSSE
T ss_pred CCCEEEEEeCCCCE
Confidence 998 7777655443
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.56 E-value=2.2e-12 Score=121.32 Aligned_cols=196 Identities=15% Similarity=0.150 Sum_probs=127.8
Q ss_pred ccCcceEEEccCCCeeEEEec---CCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 68 IQGPESMAFDPLGRGPYTGVA---DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~---~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
...|.+++++++|+ +|+... ++.|..|+.+ ..+.+... ......|.++++++++
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~--------------------~~~~~~p~~~a~spdg 97 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV--------------------VAPGTPPAYVAVDEAR 97 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE--------------------EEESCCCSEEEEETTT
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee--------------------ecCCCCCEEEEECCCC
Confidence 46899999999999 777765 4788888654 32222211 1124679999999944
Q ss_pred CcEEEEECCCC-eEEEeCC-CCeeEEceec-cCCC------cccCCcceeecCCCCEEEEeCCCcccchhheeeecccCC
Q 016318 143 GDLYIADAYFG-LMKVGPE-GGLATSLATE-AEGV------PLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 143 g~L~V~d~~~g-l~~~d~~-~g~~~~~~~~-~~~~------~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
..||+++...+ +..++.+ ++..+.+... ..+. ....++.++++++|++|+++..
T Consensus 98 ~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~----------------- 160 (347)
T 3hfq_A 98 QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG----------------- 160 (347)
T ss_dssp TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----------------
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----------------
Confidence 45899886555 6666653 4444443321 1111 1235678999999999988854
Q ss_pred CceEEEEeCC-CCeEEEec----cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceee---cccC------
Q 016318 214 TGRVLKYDPT-TKQTTVLL----RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAF---AILP------ 279 (391)
Q Consensus 214 ~g~l~~~d~~-~~~~~~~~----~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~---~~~~------ 279 (391)
.+.+..|+.+ +++..... .....|++++++|||+++|++....++|..++++.. .++.+.. ...+
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCC
Confidence 4578778776 56554322 223468899999999999999888888888887641 1222222 2222
Q ss_pred CCCCceEeCCCCC-EEEEEcCCCc
Q 016318 280 GYPDNVRTNEKGE-FWVAIHCRRS 302 (391)
Q Consensus 280 g~p~~i~~d~~G~-lwva~~~~~~ 302 (391)
..|.+++++++|+ +|++......
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~ 263 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNT 263 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTE
T ss_pred CcceeEEECCCCCEEEEEeCCCCE
Confidence 2356699999998 7777654443
No 60
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=7.5e-13 Score=122.37 Aligned_cols=184 Identities=14% Similarity=0.188 Sum_probs=129.1
Q ss_pred cCcceEEEccC-CCeeEEEecCCEEEEEeCC-ceeEE-EeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 69 QGPESMAFDPL-GRGPYTGVADGRILFWDGL-KWTDF-AFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 69 ~gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
..|.+++++++ |+ +|+++.+++|++++.+ +...+ .... .......|.++++|+ +|+|
T Consensus 71 ~~~~~i~~~~~~g~-l~v~~~~~~l~~~d~~g~~~~~~~~~~------------------~~~~~~~~~~i~~d~-~g~l 130 (314)
T 1pjx_A 71 GIPAGCQCDRDANQ-LFVADMRLGLLVVQTDGTFEEIAKKDS------------------EGRRMQGCNDCAFDY-EGNL 130 (314)
T ss_dssp CCEEEEEECSSSSE-EEEEETTTEEEEEETTSCEEECCSBCT------------------TSCBCBCCCEEEECT-TSCE
T ss_pred CCCceEEEecCCCc-EEEEECCCCEEEEeCCCCEEEEEeccC------------------CCccccCCcCEEECC-CCCE
Confidence 57899999999 77 7888777789999876 32222 1100 001135689999998 7999
Q ss_pred EEEECCC----------------CeEEEeCCCCeeEEceeccCCCcccCCcceeec----CCC-CEEEEeCCCcccchhh
Q 016318 146 YIADAYF----------------GLMKVGPEGGLATSLATEAEGVPLRFTNDLDID----DEG-NVYFTDSSTNYQRRNF 204 (391)
Q Consensus 146 ~V~d~~~----------------gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d----~~G-~ly~td~~~~~~~~~~ 204 (391)
||++... +|++++++ ++.+.+... ...+++++++ ++| .+|+++..
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~-----~~~~~~i~~~~~~d~dg~~l~v~~~~-------- 196 (314)
T 1pjx_A 131 WITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA-----FQFPNGIAVRHMNDGRPYQLIVAETP-------- 196 (314)
T ss_dssp EEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE-----ESSEEEEEEEECTTSCEEEEEEEETT--------
T ss_pred EEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC-----CCCcceEEEecccCCCCCEEEEEECC--------
Confidence 9998753 59999988 655544322 2357899999 998 69999854
Q ss_pred eeeecccCCCceEEEEeCC-CCeEE---Eec---cCC-CCcceEEEccCCCEEEEEeCCCCeEEEEEec-cccCccceee
Q 016318 205 MQLVFSAEDTGRVLKYDPT-TKQTT---VLL---RNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI-GEKAGNLEAF 275 (391)
Q Consensus 205 ~~~~~~~~~~g~l~~~d~~-~~~~~---~~~---~~~-~~~ngia~~~d~~~l~v~et~~~~I~~~~~~-g~~~g~~~~~ 275 (391)
+++|++||.+ +++.. .+. ... ..|.+++++++|+ +|+++..+++|.+++.+ |.. ...+
T Consensus 197 ---------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~---~~~~ 263 (314)
T 1pjx_A 197 ---------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQP---KMRI 263 (314)
T ss_dssp ---------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSC---SEEE
T ss_pred ---------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcE---eEEE
Confidence 4689999865 45422 111 112 5689999999998 99998777899999865 321 1222
Q ss_pred cccC-CCCCceEeCCCCC-EEEEEcCC
Q 016318 276 AILP-GYPDNVRTNEKGE-FWVAIHCR 300 (391)
Q Consensus 276 ~~~~-g~p~~i~~d~~G~-lwva~~~~ 300 (391)
..+ ..|.+++++++|+ +|++....
T Consensus 264 -~~~~~~~~~i~~~~dg~~l~v~~~~~ 289 (314)
T 1pjx_A 264 -RCPFEKPSNLHFKPQTKTIFVTEHEN 289 (314)
T ss_dssp -ECSSSCEEEEEECTTSSEEEEEETTT
T ss_pred -eCCCCCceeEEECCCCCEEEEEeCCC
Confidence 233 4688999999999 99987653
No 61
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=7e-13 Score=122.61 Aligned_cols=184 Identities=16% Similarity=0.159 Sum_probs=128.8
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
..|.+++++++|+ +|++. +++|++++.+ .++.+..... .....+|.++++|+ +|++|
T Consensus 54 ~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~~~------------------~~~~~~~~di~~d~-dG~l~ 112 (297)
T 3g4e_A 54 APVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATVDN------------------DKKNNRFNDGKVDP-AGRYF 112 (297)
T ss_dssp SCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEECCT------------------TCSSEEEEEEEECT-TSCEE
T ss_pred CceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEecCC------------------CCCCCCCCCEEECC-CCCEE
Confidence 4688999999999 88887 5689999976 4444432210 01246789999999 79999
Q ss_pred EEECC------------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCC
Q 016318 147 IADAY------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 147 V~d~~------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
+++.. .+|+++++++ +.+.+... +..||+++++++|+ +|++++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~-----~~~pngi~~spdg~~lyv~~~~----------------- 169 (297)
T 3g4e_A 113 AGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQ-----VDISNGLDWSLDHKIFYYIDSL----------------- 169 (297)
T ss_dssp EEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEE-----ESBEEEEEECTTSCEEEEEEGG-----------------
T ss_pred EecCCcccccccccCCCcEEEEEECCC-CEEEEeec-----cccccceEEcCCCCEEEEecCC-----------------
Confidence 99742 2499999874 44443322 34789999999985 9999854
Q ss_pred CceEEEEeC--CCCeEE---Eec---cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccC-CCCCc
Q 016318 214 TGRVLKYDP--TTKQTT---VLL---RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP-GYPDN 284 (391)
Q Consensus 214 ~g~l~~~d~--~~~~~~---~~~---~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~-g~p~~ 284 (391)
+++|++|+. ++++.. ++. .....|.|++++++|+ ||++...+++|++++.+. ++.......| ..|.+
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~t---G~~~~~i~~p~~~~t~ 245 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVT---GKRLQTVKLPVDKTTS 245 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTT---CCEEEEEECSSSBEEE
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCC---ceEEEEEECCCCCceE
Confidence 467888764 566542 222 2235789999999997 999988888999998652 3322222344 46788
Q ss_pred eEeC-CCCC-EEEEEcCC
Q 016318 285 VRTN-EKGE-FWVAIHCR 300 (391)
Q Consensus 285 i~~d-~~G~-lwva~~~~ 300 (391)
+++. ++++ +||++...
T Consensus 246 ~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 246 CCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEESGGGCEEEEEEBCT
T ss_pred EEEeCCCCCEEEEEcCCc
Confidence 9997 5654 99988754
No 62
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.53 E-value=3.2e-13 Score=139.52 Aligned_cols=147 Identities=14% Similarity=0.199 Sum_probs=108.7
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCC----CeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchh
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEG----GLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRN 203 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~----g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~ 203 (391)
..+|.+|++++.++.||++|...+ |+++++++ ...+.+. ...+..|.+|++|. .|+||+++..
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i----~~~~~~P~glavD~~~g~LY~tD~~------- 473 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----SRDIQAPDGLAVDWIHSNIYWTDSV------- 473 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC----CSCC--CCCEECCCSSSBCEECCTT-------
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE----eCCCCCcceEEEEeeCCcEEEEecc-------
Confidence 577999999976788999998754 99999886 2222111 11245789999995 6799999864
Q ss_pred heeeecccCCCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCC-CeEEEEEeccccCccceeec-ccCC
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFA-ILPG 280 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~-~~I~~~~~~g~~~g~~~~~~-~~~g 280 (391)
.++|.+++++++..+++. ..+..|++|+++|++.+||+++... ++|++++++|.. .+++. ..-.
T Consensus 474 ----------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~---~~~l~~~~l~ 540 (699)
T 1n7d_A 474 ----------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQ 540 (699)
T ss_dssp ----------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC---CCEESCSSCS
T ss_pred ----------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC---eeEEEeCCCC
Confidence 478999999877766665 4578899999999877799998765 799999887742 22232 2224
Q ss_pred CCCceEeCCC-CCEEEEEcCC
Q 016318 281 YPDNVRTNEK-GEFWVAIHCR 300 (391)
Q Consensus 281 ~p~~i~~d~~-G~lwva~~~~ 300 (391)
.|.+|++|++ ++||++....
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~ 561 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKL 561 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTT
T ss_pred CccEEEEeccCCEEEEEecCC
Confidence 7999999965 6799998664
No 63
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.53 E-value=1.3e-12 Score=136.42 Aligned_cols=187 Identities=16% Similarity=0.122 Sum_probs=120.5
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCCc-----eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGLK-----WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
.+++.|++|+ +|+|+. +++++++... +..+.... . ..........+|..|+ +|+||
T Consensus 327 ~~i~~D~~g~-lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~-~---------------~~~l~~~~v~~i~~d~-~g~lW 387 (758)
T 3ott_A 327 YSLFRDSKGF-YWFGGA-NGLIRFTDPAGERHDAIWYRMGD-K---------------TYPLSHNRIRHIYEDK-EQQLW 387 (758)
T ss_dssp EEEEECTTCC-EEEEET-TEEEEESCTTSSCCCCEEECTTC-S---------------SSCCSCSCEEEEEECT-TSCEE
T ss_pred EEEEEcCCCC-EEEeeC-CcceeecccccccceeEEeccCC-c---------------CCCCCCCceEEEEECC-CCCEE
Confidence 4788899999 999986 4799997651 22221100 0 0000124567888887 89999
Q ss_pred EEECCCCeEEEeCCCCeeEEceeccC-C-CcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 147 IADAYFGLMKVGPEGGLATSLATEAE-G-VPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~~~~~~~-~-~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
|+. ..||.++++++++++.+..... + ........+..|++|+||+++.+ ++|++||+++
T Consensus 388 igt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~------------------~Gl~~~~~~~ 448 (758)
T 3ott_A 388 IAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCL------------------GGIFVVDKHK 448 (758)
T ss_dssp EEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESS------------------SCEEEEEHHH
T ss_pred EEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECC------------------CceEEEcccc
Confidence 998 4699999999998877642211 1 12235677889999999999853 5799998653
Q ss_pred ------CeEE---Ee--ccCCC--CcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc--cC--CCCCceEe
Q 016318 225 ------KQTT---VL--LRNLQ--FPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--LP--GYPDNVRT 287 (391)
Q Consensus 225 ------~~~~---~~--~~~~~--~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~--~~--g~p~~i~~ 287 (391)
+... .+ ..++. ....|..+++|+ ||++....+.|.+++.+. ++.+.+.. +. ..+..+..
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~---~~~~~~~~~~~~~~~~~~~i~~ 524 (758)
T 3ott_A 449 LMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRT---REVTKLFADELTGEKSPNYLLC 524 (758)
T ss_dssp HHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTT---TEEEEECTTTSCGGGCEEEEEE
T ss_pred ccccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCC---CceEEecCCCcCCCcccceEEE
Confidence 2221 11 12222 356788888898 998322346899998543 33343321 11 23567889
Q ss_pred CCCCCEEEEEcCC
Q 016318 288 NEKGEFWVAIHCR 300 (391)
Q Consensus 288 d~~G~lwva~~~~ 300 (391)
|.+|++|+++..+
T Consensus 525 d~~g~lWigt~~G 537 (758)
T 3ott_A 525 DEDGLLWVGFHGG 537 (758)
T ss_dssp CTTSCEEEEETTE
T ss_pred CCCCCEEEEecCc
Confidence 9999999998653
No 64
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.52 E-value=5.9e-13 Score=124.47 Aligned_cols=148 Identities=13% Similarity=0.209 Sum_probs=106.5
Q ss_pred CccceEEEecCCCcEEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeec
Q 016318 131 GRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVF 209 (391)
Q Consensus 131 g~P~gi~~d~~~g~L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~ 209 (391)
..|.++++++ +|+||+++.. .+|+++|+++++++.+.... ...+.+++++++|++|+++...
T Consensus 45 ~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~i~~~~dg~l~v~~~~~------------ 107 (333)
T 2dg1_A 45 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSH----KANPAAIKIHKDGRLFVCYLGD------------ 107 (333)
T ss_dssp CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECS----SSSEEEEEECTTSCEEEEECTT------------
T ss_pred ccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCC----CCCcceEEECCCCcEEEEeCCC------------
Confidence 4578999998 7899998776 45999999988877654221 2468899999999999998541
Q ss_pred ccCCCceEEEEeCCCCeEEEecc---CCCCcceEEEccCCCEEEEEeCC------CCeEEEEEeccccCccceeecccCC
Q 016318 210 SAEDTGRVLKYDPTTKQTTVLLR---NLQFPNGLSLSKDKSFFVFCEGS------VGRLHKYWLIGEKAGNLEAFAILPG 280 (391)
Q Consensus 210 ~~~~~g~l~~~d~~~~~~~~~~~---~~~~~ngia~~~d~~~l~v~et~------~~~I~~~~~~g~~~g~~~~~~~~~g 280 (391)
....++|+++|+++++.+.+.. ....+++++++++|+ +|++... ..+|++++.++ ++...+.....
T Consensus 108 -~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~ 182 (333)
T 2dg1_A 108 -FKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDF---RTVTPIIQNIS 182 (333)
T ss_dssp -SSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTS---CCEEEEEEEES
T ss_pred -CCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCC---CEEEEeecCCC
Confidence 0112589999999888764332 234689999999998 8888654 36899987554 23333322223
Q ss_pred CCCceEeCCCCC-EEEEEcCC
Q 016318 281 YPDNVRTNEKGE-FWVAIHCR 300 (391)
Q Consensus 281 ~p~~i~~d~~G~-lwva~~~~ 300 (391)
.|.+++++++|+ +|++....
T Consensus 183 ~~~~i~~~~dg~~l~v~~~~~ 203 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTETTA 203 (333)
T ss_dssp SEEEEEECTTSSEEEEEEGGG
T ss_pred cccceEECCCCCEEEEEeCCC
Confidence 578899999997 88886543
No 65
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=1.5e-12 Score=123.06 Aligned_cols=195 Identities=15% Similarity=0.140 Sum_probs=133.3
Q ss_pred ccccCcceEEEccCCCeeEEEec-----CCEEEEEeCC--c-eeEEEeecCCCcccCCCCCCccccccccCccCccceEE
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVA-----DGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~-----~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~ 137 (391)
+.+..|.+|++|++|++|++++. .++|++++.+ + ...+. .... .......|.+++
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~-~~~~----------------~~~~~~~~~~v~ 126 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIY-LPPP----------------ITLSNSFVNDLA 126 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEE-CCTT----------------TSCTTCCCCEEE
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEE-CChh----------------hcccccccceEE
Confidence 45779999999999995555555 5799999976 2 22221 1100 001235689999
Q ss_pred EecCCCcEEEEEC---C-CCeEEEeCCCCeeEEceec------------cCCCcc-------------cCCcceeecCCC
Q 016318 138 FDKKTGDLYIADA---Y-FGLMKVGPEGGLATSLATE------------AEGVPL-------------RFTNDLDIDDEG 188 (391)
Q Consensus 138 ~d~~~g~L~V~d~---~-~gl~~~d~~~g~~~~~~~~------------~~~~~~-------------~~~~~l~~d~~G 188 (391)
++++++.+||+|. . .+|+++|+++++...+... .++..+ ..+++|+++++|
T Consensus 127 vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg 206 (343)
T 2qe8_A 127 VDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN 206 (343)
T ss_dssp EETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS
T ss_pred EecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC
Confidence 9975689999997 4 5699999987765543211 011111 247999999999
Q ss_pred -CEEEEeCCCcccchhheeeecccCCCceEEEEeCC---CCe---------EEEeccCCCCcceEEEccCCCEEEEEeCC
Q 016318 189 -NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT---TKQ---------TTVLLRNLQFPNGLSLSKDKSFFVFCEGS 255 (391)
Q Consensus 189 -~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~---~~~---------~~~~~~~~~~~ngia~~~d~~~l~v~et~ 255 (391)
.||+++.. ..++++++.. .+. +... .....|+|++++++|+ +|+++..
T Consensus 207 ~~ly~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~ 267 (343)
T 2qe8_A 207 EWLYLSPMH-----------------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLA 267 (343)
T ss_dssp CEEEEEESS-----------------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGG
T ss_pred CEEEEEeCC-----------------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccC
Confidence 59999854 2478888742 111 1111 1234799999999998 9999999
Q ss_pred CCeEEEEEe-ccccCccceeecccC--CCCCceEeCCCCCEEEEEcCC
Q 016318 256 VGRLHKYWL-IGEKAGNLEAFAILP--GYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 256 ~~~I~~~~~-~g~~~g~~~~~~~~~--g~p~~i~~d~~G~lwva~~~~ 300 (391)
+++|.+++. +| +...+...+ ..|++++++++|++|++....
T Consensus 268 ~~~V~~~d~~~G----~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 268 HSAIGVITSADR----AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp GTEEEEEETTTT----EEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CCeEEEEECCCC----CEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 999999986 43 344444333 369999999999999997654
No 66
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.50 E-value=3.8e-12 Score=119.27 Aligned_cols=189 Identities=14% Similarity=0.144 Sum_probs=135.0
Q ss_pred cceEEEccCCCeeEEEec--CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 71 PESMAFDPLGRGPYTGVA--DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~--~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
|++++++++|+.+|++.. ++.|+.++....+...... .....|.+++++++++.||++
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--------------------~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ--------------------NTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC--------------------CCCTTCCCCEEETTTTEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec--------------------CCCCccceEEECCCCCEEEEE
Confidence 788999999998888773 6889999987333222111 013448889999855568998
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
+....|..+|..+++...........+...+.+++++++|+ +|+++.. .+.+..||..+++.
T Consensus 203 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 203 NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----------------AAEVLVVDTRNGNI 265 (353)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----------------SSEEEEEETTTCCE
T ss_pred cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcE
Confidence 77666999999988765433221112234678899999986 8888743 47899999988876
Q ss_pred EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEEEEcCC
Q 016318 228 TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIHCR 300 (391)
Q Consensus 228 ~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~ 300 (391)
..... ...+.+++++||++.+|++....+.|..++... ++.......+..|.+++++++|+ +|++....
T Consensus 266 ~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 266 LAKVA-APESLAVLFNPARNEAYVTHRQAGKVSVIDAKS---YKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEE-CSSCCCEEEETTTTEEEEEETTTTEEEEEETTT---TEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEE-cCCCceEEECCCCCEEEEEECCCCeEEEEECCC---CeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 54433 234678999999999999988889999998653 22221223445688999999998 88887664
No 67
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=1.9e-12 Score=120.14 Aligned_cols=186 Identities=12% Similarity=0.138 Sum_probs=128.6
Q ss_pred cCcceEEEccCCCeeEEEec-CCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 69 QGPESMAFDPLGRGPYTGVA-DGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
..|.++++|++|+ +|++.. +++|.+++.+ +++.+..... .....+|.++++++ +|++|
T Consensus 86 ~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~g~~~~~~~~~~------------------~~~~~~~~~i~~d~-dG~l~ 145 (305)
T 3dr2_A 86 AFTNGNAVDAQQR-LVHCEHGRRAITRSDADGQAHLLVGRYA------------------GKRLNSPNDLIVAR-DGAIW 145 (305)
T ss_dssp SCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECEET------------------TEECSCCCCEEECT-TSCEE
T ss_pred CccceeeECCCCC-EEEEECCCCEEEEECCCCCEEEEEeccC------------------CCccCCCCCEEECC-CCCEE
Confidence 4689999999999 677665 4799999876 5444432110 01245688999998 89999
Q ss_pred EEEC------------------CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheee
Q 016318 147 IADA------------------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 147 V~d~------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~ 207 (391)
++|. ..+|+++|+++++++.+. . +..|++++++++|+ ||++++...
T Consensus 146 ~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-----~~~p~gl~~spdg~~lyv~~~~~~--------- 210 (305)
T 3dr2_A 146 FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-----LDHPNGLAFSPDEQTLYVSQTPEQ--------- 210 (305)
T ss_dssp EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-----ESSEEEEEECTTSSEEEEEECCC----------
T ss_pred EeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-----CCCCcceEEcCCCCEEEEEecCCc---------
Confidence 9763 135999999888777654 2 35789999999996 999985410
Q ss_pred ecccCCCceEEEEeCCCCeE---EEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCC
Q 016318 208 VFSAEDTGRVLKYDPTTKQT---TVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPD 283 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~~~~---~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~ 283 (391)
....++|++|+.+++.+ +.+. .....|.|++++++|+ ||++. .++|++++.+|.. ...+ ..+..|.
T Consensus 211 ---~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~~---~~~~-~~~~~~~ 280 (305)
T 3dr2_A 211 ---GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQL---LGHI-PTPGTAS 280 (305)
T ss_dssp -----CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSCE---EEEE-ECSSCCC
T ss_pred ---CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCCE---EEEE-ECCCcee
Confidence 01125788888765432 2222 1235789999999999 99985 4579999865531 1222 3444688
Q ss_pred ceEeCCCCC-EEEEEcC
Q 016318 284 NVRTNEKGE-FWVAIHC 299 (391)
Q Consensus 284 ~i~~d~~G~-lwva~~~ 299 (391)
+++++++++ +|++...
T Consensus 281 ~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 281 NCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEEECTTSCEEEEEETT
T ss_pred EEEEeCCCCEEEEEcCC
Confidence 999987775 9998764
No 68
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.49 E-value=1.1e-11 Score=116.47 Aligned_cols=182 Identities=12% Similarity=0.064 Sum_probs=118.6
Q ss_pred ccceeccccccCcceEEEccCCCeeEEEec-CCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccce
Q 016318 59 NSEIKFLNQIQGPESMAFDPLGRGPYTGVA-DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLG 135 (391)
Q Consensus 59 ~~~~~~~~~~~gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~g 135 (391)
+++.+.++ +..|.+|++.++|+ +|++.. .|+|++++.+ ....+..... ......+.|+|
T Consensus 23 ~~~~va~g-L~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~----------------v~~~g~~GllG 84 (347)
T 3das_A 23 VLRTVATG-LNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPG----------------VSPSGEGGLLG 84 (347)
T ss_dssp EEEEEECC-CSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTT----------------CCCBTTBSEEE
T ss_pred eeEEeecC-CCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCc----------------eeecCCCCcee
Confidence 44555444 88999999999999 777777 8999999865 3333322110 00112356899
Q ss_pred EEEecC---CCcEEEEEC---CCCeEEEeCCCC--------eeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccc
Q 016318 136 LRFDKK---TGDLYIADA---YFGLMKVGPEGG--------LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQR 201 (391)
Q Consensus 136 i~~d~~---~g~L~V~d~---~~gl~~~d~~~g--------~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~ 201 (391)
|+++++ ++.|||+.+ .+.|.++..+.+ ..+.+..........+...|++++||.|||+........
T Consensus 85 ia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~ 164 (347)
T 3das_A 85 IALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTG 164 (347)
T ss_dssp EEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGG
T ss_pred eEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCc
Confidence 999973 588999753 234899876642 233333322222234678899999999999953211100
Q ss_pred hhheeeecccCCCceEEEEeCCCC--------eEEEeccCCCCcceEEEccCCCEEEEEeCCCC---eEEEEE
Q 016318 202 RNFMQLVFSAEDTGRVLKYDPTTK--------QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG---RLHKYW 263 (391)
Q Consensus 202 ~~~~~~~~~~~~~g~l~~~d~~~~--------~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~---~I~~~~ 263 (391)
. ..+ .....|+|+|+++++. ..+++..++..|.|++++|+|+ ||++|.... .|.++.
T Consensus 165 ~--~qd--~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~ 232 (347)
T 3das_A 165 L--SQD--RKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIK 232 (347)
T ss_dssp G--TTC--TTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEEC
T ss_pred c--ccC--CCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEc
Confidence 0 000 0123689999999765 3456778889999999999988 999997653 455553
No 69
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.48 E-value=9.9e-12 Score=115.62 Aligned_cols=212 Identities=13% Similarity=0.133 Sum_probs=133.6
Q ss_pred EEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCC
Q 016318 74 MAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFG 153 (391)
Q Consensus 74 i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~g 153 (391)
.+++ +|+ +|+++.+++|++++.+.......... ......+.+++ +++||++....+
T Consensus 103 ~~~~-~~~-l~v~t~~~~l~~~d~~g~~~~~~~~~---------------------~~~~~~~~~~~-~g~l~vgt~~~~ 158 (330)
T 3hxj_A 103 FTIF-EDI-LYVTSMDGHLYAINTDGTEKWRFKTK---------------------KAIYATPIVSE-DGTIYVGSNDNY 158 (330)
T ss_dssp EEEE-TTE-EEEECTTSEEEEECTTSCEEEEEECS---------------------SCCCSCCEECT-TSCEEEECTTSE
T ss_pred ceEE-CCE-EEEEecCCEEEEEcCCCCEEEEEcCC---------------------CceeeeeEEcC-CCEEEEEcCCCE
Confidence 3444 555 88888888898888761111111100 11123346666 788999987778
Q ss_pred eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccC
Q 016318 154 LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRN 233 (391)
Q Consensus 154 l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 233 (391)
|+++|++ ++...... .. ......+++|++|++|+++ + +|+++|+.+.........
T Consensus 159 l~~~d~~-g~~~~~~~-~~---~~~~~~~~~d~~g~l~v~t-~-------------------~l~~~d~~g~~~~~~~~~ 213 (330)
T 3hxj_A 159 LYAINPD-GTEKWRFK-TN---DAITSAASIGKDGTIYFGS-D-------------------KVYAINPDGTEKWNFYAG 213 (330)
T ss_dssp EEEECTT-SCEEEEEE-CS---SCCCSCCEECTTCCEEEES-S-------------------SEEEECTTSCEEEEECCS
T ss_pred EEEECCC-CCEeEEEe-cC---CCceeeeEEcCCCEEEEEe-C-------------------EEEEECCCCcEEEEEccC
Confidence 9999998 54322111 11 2245678888999999987 3 788898443333333333
Q ss_pred CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCchhhhhhhcCcc
Q 016318 234 LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPK 313 (391)
Q Consensus 234 ~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~l~~~~~ 313 (391)
.....+++++++|+ +|++. .++.|++++.+|. ....+......+..+.++.+|++|+++..
T Consensus 214 ~~~~~~~~~~~~g~-l~v~t-~~~gl~~~~~~g~---~~~~~~~~~~~~~~~~~~~~g~l~v~t~~-------------- 274 (330)
T 3hxj_A 214 YWTVTRPAISEDGT-IYVTS-LDGHLYAINPDGT---EKWRFKTGKRIESSPVIGNTDTIYFGSYD-------------- 274 (330)
T ss_dssp SCCCSCCEECTTSC-EEEEE-TTTEEEEECTTSC---EEEEEECSSCCCSCCEECTTSCEEEECTT--------------
T ss_pred CcceeceEECCCCe-EEEEc-CCCeEEEECCCCC---EeEEeeCCCCccccceEcCCCeEEEecCC--------------
Confidence 34567788888887 88884 4678999864332 11122222234566888889999998754
Q ss_pred ceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEEE-ECCEEEEecCCC
Q 016318 314 IRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEE-KDGKLWMGSVLM 382 (391)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~~-~~g~Lylgs~~~ 382 (391)
+.+.++|++|+.+..+..... .+.++.. .+|+||+|+...
T Consensus 275 -------------------------ggl~~~d~~g~~~~~~~~~~~----~~~~~~~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 275 -------------------------GHLYAINPDGTEKWNFETGSW----IIATPVIDENGTIYFGTRNG 315 (330)
T ss_dssp -------------------------CEEEEECTTSCEEEEEECSSC----CCSCCEECTTCCEEEECTTS
T ss_pred -------------------------CCEEEECCCCcEEEEEEcCCc----cccceEEcCCCEEEEEcCCC
Confidence 347788999998877764322 2344445 679999998765
No 70
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=4.6e-12 Score=124.31 Aligned_cols=193 Identities=15% Similarity=0.142 Sum_probs=128.9
Q ss_pred cccCcceEEE-------ccCCCeeEEEecCC-------EEEEEeCC---ceeEEEeecCCCcccCCCCCCccccccccCc
Q 016318 67 QIQGPESMAF-------DPLGRGPYTGVADG-------RILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHI 129 (391)
Q Consensus 67 ~~~gPe~i~~-------d~~G~~ly~~~~~g-------~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (391)
.+..|.+|++ +++|+.+|++...+ .|+.++.. .+.. .+.. .....
T Consensus 184 ~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~------------~~~~------~~v~~ 245 (496)
T 3kya_A 184 PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDD------------RSDI------QLIAA 245 (496)
T ss_dssp SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCST------------TSCE------EEEEE
T ss_pred ccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceee------------cccc------eeecc
Confidence 3567999999 99998677776554 36666432 1110 0000 00012
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCC-------CCee------------EEceeccCCCcccCCcceeecCCCC
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPE-------GGLA------------TSLATEAEGVPLRFTNDLDIDDEGN 189 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~-------~g~~------------~~~~~~~~~~~~~~~~~l~~d~~G~ 189 (391)
...|.|++++++++.||+++...+ |+++|++ ++.+ +.+.... ....|++|+++++|+
T Consensus 246 ~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~---~~~~p~~ia~~p~G~ 322 (496)
T 3kya_A 246 YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA---DPSWEFQIFIHPTGK 322 (496)
T ss_dssp ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS---SSSCCEEEEECTTSS
T ss_pred CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC---CCCCceEEEEcCCCC
Confidence 457999999987789999999877 9999998 6654 1222111 124689999999998
Q ss_pred -EEEEeCCCcccchhheeeecccCCCceEEEEe--CCCCeE---EEec---------------cCCCCcc-eEEEc----
Q 016318 190 -VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD--PTTKQT---TVLL---------------RNLQFPN-GLSLS---- 243 (391)
Q Consensus 190 -ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d--~~~~~~---~~~~---------------~~~~~~n-gia~~---- 243 (391)
||++|+. +.+|++++ ..++.+ .++. ..+..|. |++++
T Consensus 323 ~lYvaD~~-----------------~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~ 385 (496)
T 3kya_A 323 YAYFGVIN-----------------NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDY 385 (496)
T ss_dssp EEEEEETT-----------------TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTC
T ss_pred EEEEEeCC-----------------CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccc
Confidence 8999965 46788844 444433 2221 1345788 88886
Q ss_pred ---cCCCEEEEEeCCCCeEEEEEeccccCccceeec-----------------c-------cCCCCCceEeCCC-CCEEE
Q 016318 244 ---KDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-----------------I-------LPGYPDNVRTNEK-GEFWV 295 (391)
Q Consensus 244 ---~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-----------------~-------~~g~p~~i~~d~~-G~lwv 295 (391)
.+++ |||+++.++||++++.+|. ...++ + .-..|.+|++|++ |+|||
T Consensus 386 ~~~~~g~-lyVaD~~N~rIr~i~~~G~----v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyV 460 (496)
T 3kya_A 386 TGEEEYD-FYFVDRLNFCVRKVTPEGI----VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYV 460 (496)
T ss_dssp CSSCCEE-EEEEEGGGTEEEEECTTCB----EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEE
T ss_pred cccCCCe-EEEEECCCCEEEEEeCCCC----EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEE
Confidence 4565 9999999999999986552 22121 0 0024788999996 99999
Q ss_pred EEcCCCc
Q 016318 296 AIHCRRS 302 (391)
Q Consensus 296 a~~~~~~ 302 (391)
+...+++
T Consensus 461 aD~~N~r 467 (496)
T 3kya_A 461 HDQVGHT 467 (496)
T ss_dssp EETTTTE
T ss_pred EeCCCCE
Confidence 9987644
No 71
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.46 E-value=5.5e-12 Score=131.68 Aligned_cols=185 Identities=19% Similarity=0.247 Sum_probs=120.2
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..+|+.|++|+ +|+++ +++|.+++++ .++.+...... ..........+..|+ +|+|||+
T Consensus 375 v~~i~~d~~g~-lWigt-~~GL~~~~~~~~~~~~~~~~~~~----------------~~~~~~~v~~i~~d~-~g~lWig 435 (758)
T 3ott_A 375 IRHIYEDKEQQ-LWIAT-DGSINRYDYATRQFIHYNIVDNT----------------GTYNTNWTYYIFEDT-AGQLWIS 435 (758)
T ss_dssp EEEEEECTTSC-EEEEE-TTEEEEEETTTTEEEEEEEECCC------------------CBSSSEEEEEECT-TSEEEEE
T ss_pred eEEEEECCCCC-EEEEe-CCcHhhcCcCCCcEEEeecCCCc----------------CCCCCceEEEEEEcC-CCCEEEE
Confidence 35788999998 99999 5689999986 45555321110 000123456788887 7999999
Q ss_pred ECCCCeEEEeCCC------CeeE---EceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 149 DAYFGLMKVGPEG------GLAT---SLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 149 d~~~gl~~~d~~~------g~~~---~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
....||+++|+++ +... .+ ....+.+...++.|..|++|+||+.... .++|++
T Consensus 436 T~~~Gl~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~~g~lWi~~~t-----------------~~Gl~~ 497 (758)
T 3ott_A 436 TCLGGIFVVDKHKLMQSTSGQYIAEQNY-SVHNGLSGMFINQIIPDNEGNVWVLLYN-----------------NKGIDK 497 (758)
T ss_dssp ESSSCEEEEEHHHHHHCCSSEEECSEEE-CGGGTCSCSCEEEEEECTTSCEEEEETT-----------------CSSEEE
T ss_pred ECCCceEEEccccccccCCcceeccccc-ccccccccceeeeEEEcCCCCEEEEccC-----------------CCCcEE
Confidence 9888999999763 2221 11 1122333345778999999999993211 257999
Q ss_pred EeCCCCeEEEeccC-C---CCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCC----CceEeCCCC
Q 016318 220 YDPTTKQTTVLLRN-L---QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYP----DNVRTNEKG 291 (391)
Q Consensus 220 ~d~~~~~~~~~~~~-~---~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p----~~i~~d~~G 291 (391)
||+++++++.+... + ..++.+..+.+|+ ||++. . +.|.+++.+. ++.+.+. ..++| .+|..+ +|
T Consensus 498 ~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-lWigt-~-~Gl~~~~~~~---~~~~~~~-~~gl~~~~i~~i~~~-~g 569 (758)
T 3ott_A 498 INPRTREVTKLFADELTGEKSPNYLLCDEDGL-LWVGF-H-GGVMRINPKD---ESQQSIS-FGSFSNNEILSMTCV-KN 569 (758)
T ss_dssp EETTTTEEEEECTTTSCGGGCEEEEEECTTSC-EEEEE-T-TEEEEECC-----CCCCBCC-CCC---CCEEEEEEE-TT
T ss_pred EeCCCCceEEecCCCcCCCcccceEEECCCCC-EEEEe-c-CceEEEecCC---CceEEec-ccCCCccceEEEEEC-CC
Confidence 99999988876422 2 2456788888898 99984 3 5899998543 2333332 12333 345565 89
Q ss_pred CEEEEEcCC
Q 016318 292 EFWVAIHCR 300 (391)
Q Consensus 292 ~lwva~~~~ 300 (391)
++|+++..+
T Consensus 570 ~lWi~t~~G 578 (758)
T 3ott_A 570 SIWVSTTNG 578 (758)
T ss_dssp EEEEEESSC
T ss_pred CEEEECCCC
Confidence 999998654
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.46 E-value=7e-11 Score=109.84 Aligned_cols=188 Identities=9% Similarity=-0.007 Sum_probs=121.1
Q ss_pred ccCcceEEEccCCCeeEEEec-CCEEEEEeCCceeE-EEeecCCCcccCCCCCCccccccccCccCccce-EEEecCCCc
Q 016318 68 IQGPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTD-FAFTSNNRSELCNPKPIATSYLKNEHICGRPLG-LRFDKKTGD 144 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~g-i~~d~~~g~ 144 (391)
...| +++++++|+.+|++.. ++.|+.++...-.. .... .....|.. +++++++..
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~---------------------~~~~~~~~~~~~s~dg~~ 97 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI---------------------QEGQSSMADVDITPDDQF 97 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE---------------------EECSSCCCCEEECTTSSE
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec---------------------ccCCCCccceEECCCCCE
Confidence 4456 9999999997777665 78999998862111 1110 01345666 999984344
Q ss_pred EEEEECCC---CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCce-EEE
Q 016318 145 LYIADAYF---GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGR-VLK 219 (391)
Q Consensus 145 L~V~d~~~---gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~-l~~ 219 (391)
||++.... .|..+|.++++....... ...+++++++++|+ +|+++.. .+. +..
T Consensus 98 l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~-----------------~~~~i~~ 155 (331)
T 3u4y_A 98 AVTVTGLNHPFNMQSYSFLKNKFISTIPI-----PYDAVGIAISPNGNGLILIDRS-----------------SANTVRR 155 (331)
T ss_dssp EEECCCSSSSCEEEEEETTTTEEEEEEEC-----CTTEEEEEECTTSSCEEEEEET-----------------TTTEEEE
T ss_pred EEEecCCCCcccEEEEECCCCCeEEEEEC-----CCCccceEECCCCCEEEEEecC-----------------CCceEEE
Confidence 66443332 599999988865443221 12468999999995 8888743 234 444
Q ss_pred EeCCC-CeE----EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCcc-ceeecccCCCCCceEeCCCCC-
Q 016318 220 YDPTT-KQT----TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN-LEAFAILPGYPDNVRTNEKGE- 292 (391)
Q Consensus 220 ~d~~~-~~~----~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~-~~~~~~~~g~p~~i~~d~~G~- 292 (391)
|+.+. +.. .........|.+++++|||+++|++....+.|..++++..+.-+ ...+ .....|.+++++++|+
T Consensus 156 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 156 FKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAV-GTNNLPGTIVVSRDGST 234 (331)
T ss_dssp EEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEE-ECSSCCCCEEECTTSSE
T ss_pred EEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeec-cCCCCCceEEECCCCCE
Confidence 44322 222 12223345689999999999999998888899999976432100 1112 2335789999999999
Q ss_pred EEEEEcCC
Q 016318 293 FWVAIHCR 300 (391)
Q Consensus 293 lwva~~~~ 300 (391)
+|++....
T Consensus 235 l~v~~~~~ 242 (331)
T 3u4y_A 235 VYVLTEST 242 (331)
T ss_dssp EEEECSSE
T ss_pred EEEEEcCC
Confidence 77765443
No 73
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.42 E-value=1.8e-11 Score=116.17 Aligned_cols=176 Identities=11% Similarity=0.157 Sum_probs=111.7
Q ss_pred cccCcceEEEccCCCeeEEEecCCEEEEEeCC-cee-EEEeecCCCcccCCCCCCccccccccCccCccceEEEecC---
Q 016318 67 QIQGPESMAFDPLGRGPYTGVADGRILFWDGL-KWT-DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK--- 141 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~--- 141 (391)
.+..|.+|+++++|+.+|++...|+|++++.+ ... .+.... . ......+.|+||+++++
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~----~------------v~~~g~~g~~gia~~pdf~~ 79 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVP----D------------VWAHGQGGLLDVVLAPDFAQ 79 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCC----C------------CCCSTTCSEEEEEECTTHHH
T ss_pred CCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCc----c------------cccCCCCCceeEEECCCCCC
Confidence 47899999999999846677778999999866 221 111110 0 00111345899999984
Q ss_pred CCcEEEEECC--------CCeEEEeCCCC--e---eEEceeccCC--CcccCCcceeecCCCCEEEEeCCCcccchhhee
Q 016318 142 TGDLYIADAY--------FGLMKVGPEGG--L---ATSLATEAEG--VPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 142 ~g~L~V~d~~--------~gl~~~d~~~g--~---~~~~~~~~~~--~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~ 206 (391)
++.|||++.. ..|.+++.+.+ . .+.+...... .....+++|++++||+||++....... ....
T Consensus 80 ~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~--~~~q 157 (353)
T 2g8s_A 80 SRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQR--PTAQ 157 (353)
T ss_dssp HCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCG--GGGG
T ss_pred CCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCC--CccC
Confidence 5899999754 23888876533 2 2333222221 123468899999999999997331110 0000
Q ss_pred eecccCCCceEEEEeCCCC-------------eEEEeccCCCCcceEEEccCCCEEEEEeCCCC---eEEEE
Q 016318 207 LVFSAEDTGRVLKYDPTTK-------------QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG---RLHKY 262 (391)
Q Consensus 207 ~~~~~~~~g~l~~~d~~~~-------------~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~---~I~~~ 262 (391)
+ .....|+|+|+++++. ..+++..++..|.|++++++...||++|...+ .|.++
T Consensus 158 ~--~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i 227 (353)
T 2g8s_A 158 D--LDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIP 227 (353)
T ss_dssp C--TTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECC
T ss_pred C--CCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEe
Confidence 0 0123578999998754 34566677888999999994444999987643 45544
No 74
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.42 E-value=1.1e-10 Score=109.49 Aligned_cols=200 Identities=14% Similarity=0.102 Sum_probs=128.7
Q ss_pred ccCcceEEEccCCCeeEEEe-cCCEEEEEeCC---ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 68 IQGPESMAFDPLGRGPYTGV-ADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~-~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
...|.+++++++|+.+|++. .++.|..|+.+ ....+...... +.++ ........|.++++++ +|
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~------~~~p-----~~~~~~~~~~~~~~sp-dg 152 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHS------GHGP-----RPEQDGSHIHYTDLTP-DN 152 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECC------CCCS-----STTCSSCCEEEEEECT-TS
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecC------CCCC-----CccccCCCceEEEECC-CC
Confidence 45899999999999888887 56778777653 33333221110 0000 0001234688999999 66
Q ss_pred cEEEEECCCC-eEEEeCC-CCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceE--E
Q 016318 144 DLYIADAYFG-LMKVGPE-GGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRV--L 218 (391)
Q Consensus 144 ~L~V~d~~~g-l~~~d~~-~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l--~ 218 (391)
++|+++...+ |..++.+ ++++...... .......|+++++++||+ +|+++.. .+.+ +
T Consensus 153 ~l~v~~~~~~~v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spdg~~l~v~~~~-----------------~~~v~v~ 214 (347)
T 3hfq_A 153 RLAVIDLGSDKVYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPDGQYAFLAGEL-----------------SSQIASL 214 (347)
T ss_dssp CEEEEETTTTEEEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEE
T ss_pred cEEEEeCCCCEEEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCCCCEEEEEeCC-----------------CCEEEEE
Confidence 7999988755 7777776 5655543221 111123678899999997 8887743 2444 4
Q ss_pred EEeCCCCeEEEecc--C-------CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccC---CCCCceE
Q 016318 219 KYDPTTKQTTVLLR--N-------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP---GYPDNVR 286 (391)
Q Consensus 219 ~~d~~~~~~~~~~~--~-------~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~---g~p~~i~ 286 (391)
.++..+++.+.... . ...+.+++++|||++||++....+.|..++++.. ++.+.....+ ..|.+++
T Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 215 KYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD--GHLTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp EEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG--GCEEEEEEEECSSSCCCEEE
T ss_pred EecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC--CcEEEeEEEecCCCCcCeEE
Confidence 45554566543321 1 1347789999999999999887889999987632 2333333322 3689999
Q ss_pred eCCCCC-EEEEEcC
Q 016318 287 TNEKGE-FWVAIHC 299 (391)
Q Consensus 287 ~d~~G~-lwva~~~ 299 (391)
++++|+ +|++...
T Consensus 293 ~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 293 LDPTEAFVVVVNQN 306 (347)
T ss_dssp ECTTSSEEEEEETT
T ss_pred ECCCCCEEEEEEcC
Confidence 999998 6776554
No 75
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.41 E-value=2e-10 Score=106.76 Aligned_cols=194 Identities=14% Similarity=0.209 Sum_probs=124.6
Q ss_pred cCcceEEEccCCCeeEEEecC-CEEEEEeCC----ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 69 QGPESMAFDPLGRGPYTGVAD-GRILFWDGL----KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~-g~I~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
..|.+++++++|+.+|++..+ +.|..|+.+ ....+.... ..+.|.++++++++.
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~s~dg~ 96 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA---------------------LPGSLTHISTDHQGQ 96 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE---------------------CSSCCSEEEECTTSS
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc---------------------cCCCCcEEEEcCCCC
Confidence 479999999999988888876 888887543 333222110 124788999999444
Q ss_pred cEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEe
Q 016318 144 DLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD 221 (391)
Q Consensus 144 ~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d 221 (391)
.||+++...+ |..++...+........... ...+.+++++++|+ +|+++.. ++.+..||
T Consensus 97 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d 157 (343)
T 1ri6_A 97 FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG--LDGCHSANISPDNRTLWVPALK-----------------QDRICLFT 157 (343)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEEECC--CTTBCCCEECTTSSEEEEEEGG-----------------GTEEEEEE
T ss_pred EEEEEecCCCeEEEEECCCCccccccccccC--CCCceEEEECCCCCEEEEecCC-----------------CCEEEEEE
Confidence 5888887655 77777643322222222221 13588999999995 7777632 46788888
Q ss_pred CCC-CeEEEe------ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccce---eecccCC------CCCce
Q 016318 222 PTT-KQTTVL------LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLE---AFAILPG------YPDNV 285 (391)
Q Consensus 222 ~~~-~~~~~~------~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~---~~~~~~g------~p~~i 285 (391)
..+ ++.... ......|++++++||++++|++....+.|..++++.. .++.+ .+...+. .|..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeeccccCccccccCCccce
Confidence 776 655321 1233478899999999999999877889999987532 12222 2222221 23469
Q ss_pred EeCCCCC-EEEEEcCCCch
Q 016318 286 RTNEKGE-FWVAIHCRRSL 303 (391)
Q Consensus 286 ~~d~~G~-lwva~~~~~~~ 303 (391)
+++++|+ +|++......+
T Consensus 237 ~~s~dg~~l~v~~~~~~~i 255 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLI 255 (343)
T ss_dssp EECTTSSEEEEEETTTTEE
T ss_pred EECCCCCEEEEEecCCCEE
Confidence 9999997 66665444433
No 76
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.39 E-value=1.6e-10 Score=105.79 Aligned_cols=226 Identities=13% Similarity=0.069 Sum_probs=146.9
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..+.+++++++|+ +++ +.+++|+.++++. +.+...... ....+.+..+.+ +|+++|+
T Consensus 37 ~~~~~~~~~pdG~-ilv-s~~~~V~~~d~~G-~~~W~~~~~-------------------~~~~~~~~~~~~-dG~~lv~ 93 (276)
T 3no2_A 37 WECNSVAATKAGE-ILF-SYSKGAKMITRDG-RELWNIAAP-------------------AGCEMQTARILP-DGNALVA 93 (276)
T ss_dssp CCCCEEEECTTSC-EEE-ECBSEEEEECTTS-CEEEEEECC-------------------TTCEEEEEEECT-TSCEEEE
T ss_pred CCCcCeEECCCCC-EEE-eCCCCEEEECCCC-CEEEEEcCC-------------------CCccccccEECC-CCCEEEE
Confidence 3688999999999 555 5678899998861 111111000 011244667777 7899998
Q ss_pred ECC-CC-eEEEeCCCCeeEEceeccC-CCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCC
Q 016318 149 DAY-FG-LMKVGPEGGLATSLATEAE-GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 149 d~~-~g-l~~~d~~~g~~~~~~~~~~-~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
+.. .+ ++.+|+++..+..+..... ..+...+..++.+++|+++++++. +++|+.+|++.+
T Consensus 94 ~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----------------~~~v~~~d~~G~ 156 (276)
T 3no2_A 94 WCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-----------------TSEVREIAPNGQ 156 (276)
T ss_dssp EESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----------------TTEEEEECTTSC
T ss_pred ecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-----------------CCEEEEECCCCC
Confidence 876 54 9999997765555432211 123456788899999999999854 589999999844
Q ss_pred eEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEec-cccCccceeec--ccCC----CCCceEeCCCCCEEEEEc
Q 016318 226 QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI-GEKAGNLEAFA--ILPG----YPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 226 ~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~-g~~~g~~~~~~--~~~g----~p~~i~~d~~G~lwva~~ 298 (391)
....+. ....|.+++..++++ ++++...+++|..++.+ |... -.+. ++++ .|.++.+.++|+++|+..
T Consensus 157 ~~w~~~-~~~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~---w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 157 LLNSVK-LSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIV---RRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEE-CSSCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEE---EEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEEE-CCCCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEE---EEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 333333 234678899999999 67777777899999866 4211 0111 1222 367889999999999976
Q ss_pred CCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEE
Q 016318 299 CRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVE 369 (391)
Q Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~ 369 (391)
.++.... + ....+.++++|++|+++..|.+.. .+..+|.++
T Consensus 232 ~g~~~~~-----~-----------------------~~~~~~~~~~~~~g~~~W~~~~~~--~~~~~~~~~ 272 (276)
T 3no2_A 232 QGHDREA-----G-----------------------KGKHPQLVEIDSEGKVVWQLNDKV--KFGMISTIC 272 (276)
T ss_dssp CTTCTTG-----G-----------------------GSCCCSEEEECTTSBEEEEECCTT--TSCCCCEEE
T ss_pred cCccccc-----c-----------------------ccCCceEEEECCCCCEEEEecCcc--cccceeeee
Confidence 4422100 0 001245888999999999997633 234566653
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.39 E-value=2.9e-10 Score=107.35 Aligned_cols=191 Identities=13% Similarity=0.162 Sum_probs=120.3
Q ss_pred cccCcceEEEccCCCeeEEEecC----CEEEE--EeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEE
Q 016318 67 QIQGPESMAFDPLGRGPYTGVAD----GRILF--WDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~~ly~~~~~----g~I~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~ 138 (391)
....|..++++++|+.+|++..+ +.|.. ++.+ ..+.+.... .....|..+++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~--------------------~~~~~p~~~~~ 107 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK--------------------TMGADPCYLTT 107 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE--------------------CSSSCEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec--------------------cCCCCcEEEEE
Confidence 45689999999999989998875 67754 4543 233332211 11356888888
Q ss_pred ecCCCcEEEEECCCC-eEEEeCCC-CeeEEcee--ccCC-------CcccCCcceeecCCCC-EEEEeCCCcccchhhee
Q 016318 139 DKKTGDLYIADAYFG-LMKVGPEG-GLATSLAT--EAEG-------VPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 139 d~~~g~L~V~d~~~g-l~~~d~~~-g~~~~~~~--~~~~-------~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~ 206 (391)
. ++.||+++...+ +..++..+ +.+..+.. ...+ .....++.++++++|+ +|+++..
T Consensus 108 -d-g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~---------- 175 (361)
T 3scy_A 108 -N-GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG---------- 175 (361)
T ss_dssp -C-SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT----------
T ss_pred -C-CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC----------
Confidence 3 677999987655 77777653 33222211 0111 1123457799999997 8888743
Q ss_pred eecccCCCceEEEE--eCCCC----e-E-------EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccc
Q 016318 207 LVFSAEDTGRVLKY--DPTTK----Q-T-------TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNL 272 (391)
Q Consensus 207 ~~~~~~~~g~l~~~--d~~~~----~-~-------~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~ 272 (391)
++.+..| +..++ + + .........|++++++|||+++|++....+.|..++++. ++.
T Consensus 176 -------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~---g~~ 245 (361)
T 3scy_A 176 -------TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD---GML 245 (361)
T ss_dssp -------TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET---TEE
T ss_pred -------CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC---Cce
Confidence 3455555 54443 2 2 122233457889999999999999987788999998763 222
Q ss_pred eeecc---cC---CCCCceEeCCCCC-EEEEEcC
Q 016318 273 EAFAI---LP---GYPDNVRTNEKGE-FWVAIHC 299 (391)
Q Consensus 273 ~~~~~---~~---g~p~~i~~d~~G~-lwva~~~ 299 (391)
+.... .+ ..|.+++++++|+ +|++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred EEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 22222 22 1345899999998 6666554
No 78
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.39 E-value=7.5e-10 Score=105.34 Aligned_cols=184 Identities=13% Similarity=0.171 Sum_probs=130.8
Q ss_pred cCcceEEEccCCCeeE-EEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 69 QGPESMAFDPLGRGPY-TGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly-~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
..|.+++++++|+.+| ++..++.|..|+....+...... ....+.++++++++..||+
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~---------------------~~~~v~~~~~spdg~~l~~ 90 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP---------------------AGSSPQGVAVSPDGKQVYV 90 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---------------------CSSSEEEEEECTTSSEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---------------------CCCCccceEECCCCCEEEE
Confidence 3588999999998665 55588999999876222221110 1236889999985455888
Q ss_pred EECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCC
Q 016318 148 ADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 148 ~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
+... ..|..+|..+++....... ...+.+++++++|+ +|++.+. ++.|..||..++
T Consensus 91 ~~~~~~~v~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~ 148 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVAGTVKT-----GKSPLGLALSPDGKKLYVTNNG-----------------DKTVSVINTVTK 148 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTT
T ss_pred EECCCCEEEEEECCCCeEEEEEeC-----CCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCC
Confidence 8766 4499999998865543322 12468899999986 7677643 578999999988
Q ss_pred eEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEEEEc
Q 016318 226 QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIH 298 (391)
Q Consensus 226 ~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwva~~ 298 (391)
+..........+..++++||++.+|++....+.|+.+++... +..........+.+++++++|+ +|++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 149 AVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---SVIDTVKVEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEECSSEEEEEEECTTSSEEEEEEE
T ss_pred cEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---eEEEEEecCCCccceEECCCCCEEEEEec
Confidence 876665555678999999999989888887889999987542 2221122234567889999997 666553
No 79
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.38 E-value=2.5e-11 Score=112.66 Aligned_cols=184 Identities=9% Similarity=-0.014 Sum_probs=124.1
Q ss_pred cCcceEEEccCCCeeEEEecC---CEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 69 QGPESMAFDPLGRGPYTGVAD---GRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~---g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
..|.+|+++++|+ +|++... .+|++++.. .++.+.... ....|.|++... ++
T Consensus 72 ~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~~---------------------~~~~~~g~~~~~-~~ 128 (306)
T 2p4o_A 72 GKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTLP---------------------DAIFLNGITPLS-DT 128 (306)
T ss_dssp SEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEECT---------------------TCSCEEEEEESS-SS
T ss_pred CCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeCC---------------------CccccCcccccC-CC
Confidence 3689999999999 6666532 369998754 444443221 134567888766 77
Q ss_pred cEEEEECCCC-eEEEeCCCCeeEEc--eec----cCCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCc
Q 016318 144 DLYIADAYFG-LMKVGPEGGLATSL--ATE----AEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 144 ~L~V~d~~~g-l~~~d~~~g~~~~~--~~~----~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
++|++|...| |+++|+.+++.+.. ... .....+..||+| +++| .+|++++. ++
T Consensus 129 ~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~-----------------~~ 189 (306)
T 2p4o_A 129 QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE-----------------KM 189 (306)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT-----------------TT
T ss_pred cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC-----------------CC
Confidence 8999997655 99999987643322 110 111235678998 5555 79999965 47
Q ss_pred eEEEEeCCC-CeE---EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec--ccC-CCCCceEeC
Q 016318 216 RVLKYDPTT-KQT---TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA--ILP-GYPDNVRTN 288 (391)
Q Consensus 216 ~l~~~d~~~-~~~---~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~--~~~-g~p~~i~~d 288 (391)
+|++|+.+. ++. +.+. .+..|.|++++++|+ +||++..+++|.+++.+| +..... ..+ ..|.+++++
T Consensus 190 ~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G----~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 190 LLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR----STTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp EEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCC-EEEECBTTCCEEEECTTC----CEEEEECGGGTCTTEEEEEEC
T ss_pred EEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCC-EEEEeCCCCeEEEECCCC----CEEEEeecccccCCceEEEEe
Confidence 899998764 332 2222 246799999999998 899998889999998554 222221 233 468999998
Q ss_pred ---CCC-CEEEEEcCC
Q 016318 289 ---EKG-EFWVAIHCR 300 (391)
Q Consensus 289 ---~~G-~lwva~~~~ 300 (391)
+++ .+||+....
T Consensus 264 g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 264 QTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CSTTTTTEEEEEECTT
T ss_pred cccCCCCEEEEECCCC
Confidence 674 599988753
No 80
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.37 E-value=2.3e-11 Score=115.39 Aligned_cols=199 Identities=15% Similarity=0.113 Sum_probs=121.2
Q ss_pred ccCcceEEEccC---CCeeEEEecC------CEEEEEeCC--ce---eEEEeecCCCcccCCCCCCccccccccCccCcc
Q 016318 68 IQGPESMAFDPL---GRGPYTGVAD------GRILFWDGL--KW---TDFAFTSNNRSELCNPKPIATSYLKNEHICGRP 133 (391)
Q Consensus 68 ~~gPe~i~~d~~---G~~ly~~~~~------g~I~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P 133 (391)
..+|.+|+++++ +..+|+.... ++|.+++.+ .+ +.+....+. .......|
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~----------------~~~~~h~~ 137 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPA----------------RPHGLHSG 137 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECC----------------CTTCCCCC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCC----------------CCCCCcCC
Confidence 569999999998 4447776552 789999755 11 112111000 00113457
Q ss_pred ceEEEecCCCcEEEEECC--------------CCeEEEeCCCC-------------eeEEceeccCCCcccCCcceeecC
Q 016318 134 LGLRFDKKTGDLYIADAY--------------FGLMKVGPEGG-------------LATSLATEAEGVPLRFTNDLDIDD 186 (391)
Q Consensus 134 ~gi~~d~~~g~L~V~d~~--------------~gl~~~d~~~g-------------~~~~~~~~~~~~~~~~~~~l~~d~ 186 (391)
.+|++++ +|.|||++.. ..|+++++++. ..+.+.. .++.|+++++++
T Consensus 138 ~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~-----G~rnp~g~a~d~ 211 (352)
T 2ism_A 138 GRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSL-----GHRNPQGLAWHP 211 (352)
T ss_dssp CCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEE-----CCSEECCCEECT
T ss_pred ceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEE-----cCCCcccEEEEC
Confidence 8999999 7899999642 23999998852 1111111 246799999999
Q ss_pred -CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC--------------C--eEEEeccCCCCcceEEEccCCCEE
Q 016318 187 -EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT--------------K--QTTVLLRNLQFPNGLSLSKDKSFF 249 (391)
Q Consensus 187 -~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~--------------~--~~~~~~~~~~~~ngia~~~d~~~l 249 (391)
+|+||+++.+...-. + .+...|.++.+.. + ...........|.|+++ .+|+ +
T Consensus 212 ~~g~l~v~d~g~~~~~-~--------~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~-l 280 (352)
T 2ism_A 212 KTGELFSSEHGPSGEQ-G--------YGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGD-L 280 (352)
T ss_dssp TTCCEEEEEECC---------------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTE-E
T ss_pred CCCCEEEEEcCCCCCC-C--------CCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCE-E
Confidence 799999996532200 0 0001122222110 0 00011122346889999 4665 9
Q ss_pred EEEeCCCCeEEEEEeccccC----ccceeecccCCCCCceEeCCCCCEEEEEcC
Q 016318 250 VFCEGSVGRLHKYWLIGEKA----GNLEAFAILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 250 ~v~et~~~~I~~~~~~g~~~----g~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
|+++..+++|+++++++... ...+.+....+.|.+++++++|.+|+++..
T Consensus 281 ~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 281 YVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp EEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred EEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 99999999999999876431 122333332357899999999999999865
No 81
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.35 E-value=7.8e-10 Score=101.16 Aligned_cols=175 Identities=11% Similarity=-0.028 Sum_probs=117.1
Q ss_pred CCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCeEEEe
Q 016318 79 LGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLMKVG 158 (391)
Q Consensus 79 ~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl~~~d 158 (391)
.|++++++..+++|+.++.+.-+........ ....++++.+++ +|+++++ ...+++.+|
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~-------------------~~~~~~~~~~~p-dG~ilvs-~~~~V~~~d 62 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE-------------------KGWECNSVAATK-AGEILFS-YSKGAKMIT 62 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECC-------------------TTCCCCEEEECT-TSCEEEE-CBSEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCC-------------------ccCCCcCeEECC-CCCEEEe-CCCCEEEEC
Confidence 3567888899999999998521222111100 013578889998 8899994 456799999
Q ss_pred CCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEec--cC---
Q 016318 159 PEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL--RN--- 233 (391)
Q Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~--- 233 (391)
+++..+..+... . ....++....++|+++++++. .+++++.+|++++.+..+. ..
T Consensus 63 ~~G~~~W~~~~~-~---~~~~~~~~~~~dG~~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~~~ 122 (276)
T 3no2_A 63 RDGRELWNIAAP-A---GCEMQTARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIER 122 (276)
T ss_dssp TTSCEEEEEECC-T---TCEEEEEEECTTSCEEEEEES----------------TTEEEEEECTTSCEEEEEEECCSCSS
T ss_pred CCCCEEEEEcCC-C---CccccccEECCCCCEEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCCCc
Confidence 954444444321 1 113456788899999999843 1468999998665544432 11
Q ss_pred -CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCCCCceEeCCCCCEEEEEcCC
Q 016318 234 -LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 234 -~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
...+.+++..++|+ ++++...+++|..++.+|. .++. ..++.|.++...++|+++++....
T Consensus 123 ~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~G~-----~~w~~~~~~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 123 PHAQFRQINKNKKGN-YLVPLFATSEVREIAPNGQ-----LLNSVKLSGTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp GGGSCSCCEECTTSC-EEEEETTTTEEEEECTTSC-----EEEEEECSSCCCEEEECTTSCEEEECBTT
T ss_pred ccccccCceECCCCC-EEEEecCCCEEEEECCCCC-----EEEEEECCCCccceeEcCCCCEEEEeCCC
Confidence 23567889999999 6677788899999986652 1222 334568888999999999986553
No 82
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.32 E-value=6.2e-10 Score=105.65 Aligned_cols=191 Identities=13% Similarity=0.123 Sum_probs=115.9
Q ss_pred ccCcceEEEccCCCeeEEEecCCEEEEEeCC---ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 68 IQGPESMAFDPLGRGPYTGVADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
...|..++++++|+.+|++..+ .|..|+.+ +....... ...+.|.++++++ +|+
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~---------------------~~~g~~~~~~~sp-dg~ 95 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH---------------------PIGGHPRANDADT-NTR 95 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE---------------------ECCSSGGGGCTTS-CCE
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe---------------------ecCCCCccEEECC-CCC
Confidence 4579999999999988988877 77777642 22111110 0123477788888 566
Q ss_pred -EE--EEE------C------CCC-eEEEeCC-CCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhhee
Q 016318 145 -LY--IAD------A------YFG-LMKVGPE-GGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 145 -L~--V~d------~------~~g-l~~~d~~-~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~ 206 (391)
|| +++ . ..| +..++.+ .++...............+.+++++++|+ +|+++.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~---------- 165 (365)
T 1jof_A 96 AIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT---------- 165 (365)
T ss_dssp EEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT----------
T ss_pred EEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC----------
Confidence 34 343 1 223 4445443 24332211111001124688999999996 7777743
Q ss_pred eecccCCCceEEEEeCC-CCeEEEec--c---CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccce----eec
Q 016318 207 LVFSAEDTGRVLKYDPT-TKQTTVLL--R---NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLE----AFA 276 (391)
Q Consensus 207 ~~~~~~~~g~l~~~d~~-~~~~~~~~--~---~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~----~~~ 276 (391)
.+.|..|+.+ +++...+. . ....|.+++++|||+++|++....+.|..++++.. .++.. .+.
T Consensus 166 -------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~ 237 (365)
T 1jof_A 166 -------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFP 237 (365)
T ss_dssp -------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEE
T ss_pred -------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEE
Confidence 3578888876 67654321 1 14568999999999999999877778888776421 12221 122
Q ss_pred ccC----C---------CCCceE-eCCCCC-EEEEEcC
Q 016318 277 ILP----G---------YPDNVR-TNEKGE-FWVAIHC 299 (391)
Q Consensus 277 ~~~----g---------~p~~i~-~d~~G~-lwva~~~ 299 (391)
.+| + .|.+++ ++++|+ +|++...
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 222 1 366799 999998 6766544
No 83
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.32 E-value=1.4e-10 Score=108.56 Aligned_cols=181 Identities=16% Similarity=0.166 Sum_probs=123.4
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
.|.+++++++|+ +|+++. .+|++++.+ .++.+.... ......+|.++++|+ +|++|+
T Consensus 91 ~v~~i~~~~dg~-l~v~~~-~gl~~~d~~~g~~~~~~~~~------------------~~~~~~~~~~i~~d~-~G~l~v 149 (326)
T 2ghs_A 91 MGSALAKISDSK-QLIASD-DGLFLRDTATGVLTLHAELE------------------SDLPGNRSNDGRMHP-SGALWI 149 (326)
T ss_dssp CEEEEEEEETTE-EEEEET-TEEEEEETTTCCEEEEECSS------------------TTCTTEEEEEEEECT-TSCEEE
T ss_pred cceEEEEeCCCe-EEEEEC-CCEEEEECCCCcEEEEeeCC------------------CCCCCCCCCCEEECC-CCCEEE
Confidence 578899999998 777764 459999875 444332110 001135688999998 789999
Q ss_pred EECC-------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 148 ADAY-------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 148 ~d~~-------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
++.. .+|++++ +++++.+... ...+++++++++|+ +|++++. .++|++
T Consensus 150 ~~~~~~~~~~~~~l~~~~--~g~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~~-----------------~~~I~~ 205 (326)
T 2ghs_A 150 GTMGRKAETGAGSIYHVA--KGKVTKLFAD-----ISIPNSICFSPDGTTGYFVDTK-----------------VNRLMR 205 (326)
T ss_dssp EEEETTCCTTCEEEEEEE--TTEEEEEEEE-----ESSEEEEEECTTSCEEEEEETT-----------------TCEEEE
T ss_pred EeCCCcCCCCceEEEEEe--CCcEEEeeCC-----CcccCCeEEcCCCCEEEEEECC-----------------CCEEEE
Confidence 9753 3599999 4666654322 23688999999995 8999854 468999
Q ss_pred EeCC--CC-eE---EEec---cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCC-CCCceEeC-
Q 016318 220 YDPT--TK-QT---TVLL---RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG-YPDNVRTN- 288 (391)
Q Consensus 220 ~d~~--~~-~~---~~~~---~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g-~p~~i~~d- 288 (391)
|+.+ ++ +. +.+. .....|.+++++++|+ +|++....++|.+++.+|. ....+ .++. .|.+++++
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~---~~~~i-~~~~~~~~~~af~g 280 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN---HIARY-EVPGKQTTCPAFIG 280 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCC---EEEEE-ECSCSBEEEEEEES
T ss_pred EEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC---EEEEE-ECCCCCcEEEEEec
Confidence 9864 55 32 2221 2235689999999998 9999766789999986442 11222 2332 47788887
Q ss_pred CCCC-EEEEEcCC
Q 016318 289 EKGE-FWVAIHCR 300 (391)
Q Consensus 289 ~~G~-lwva~~~~ 300 (391)
++++ +|++....
T Consensus 281 ~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 281 PDASRLLVTSARE 293 (326)
T ss_dssp TTSCEEEEEEBCT
T ss_pred CCCCEEEEEecCC
Confidence 6654 99987664
No 84
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.28 E-value=1.7e-09 Score=100.40 Aligned_cols=189 Identities=11% Similarity=0.065 Sum_probs=119.4
Q ss_pred EEccCCCeeE-EEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCC-
Q 016318 75 AFDPLGRGPY-TGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYF- 152 (391)
Q Consensus 75 ~~d~~G~~ly-~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~- 152 (391)
.++.+++.+| ++..++.|..++...-+...... .....| ++++++++..||+++...
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~--------------------~~~~~~-~~~~s~dg~~l~~~~~~~~ 62 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT--------------------LGYDFV-DTAITSDCSNVVVTSDFCQ 62 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE--------------------CCCCEE-EEEECSSSCEEEEEESTTC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE--------------------ccCCcc-eEEEcCCCCEEEEEeCCCC
Confidence 3444555445 55667899999876211111110 012346 999998444599998754
Q ss_pred CeEEEeCCCCee-EEceeccCCCcccCCcc-eeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEe
Q 016318 153 GLMKVGPEGGLA-TSLATEAEGVPLRFTND-LDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVL 230 (391)
Q Consensus 153 gl~~~d~~~g~~-~~~~~~~~~~~~~~~~~-l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~ 230 (391)
.|+++|.++++. ...... ...+.. ++++++|+..++... ....+.|..||.++++....
T Consensus 63 ~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~--------------~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQE-----GQSSMADVDITPDDQFAVTVTG--------------LNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp EEEEEECSSSSCEEEEEEE-----CSSCCCCEEECTTSSEEEECCC--------------SSSSCEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCceeEEeccc-----CCCCccceEECCCCCEEEEecC--------------CCCcccEEEEECCCCCeEEE
Confidence 599999998875 222221 124666 999999975444422 01112899999998887665
Q ss_pred ccCCCCcceEEEccCCCEEEEEeCCCCe-EEEEEeccccC-ccc-eeecccCCCCCceEeCCCCC-EEEEEcCCCch
Q 016318 231 LRNLQFPNGLSLSKDKSFFVFCEGSVGR-LHKYWLIGEKA-GNL-EAFAILPGYPDNVRTNEKGE-FWVAIHCRRSL 303 (391)
Q Consensus 231 ~~~~~~~ngia~~~d~~~l~v~et~~~~-I~~~~~~g~~~-g~~-~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~ 303 (391)
......|++++++|||+++|+++...+. |+.|+++.... ... .........|.+++++++|+ +|++......+
T Consensus 124 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 200 (331)
T 3u4y_A 124 IPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSI 200 (331)
T ss_dssp EECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeE
Confidence 5555678999999999989999877677 88888764211 001 11111223578999999998 88887654443
No 85
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.26 E-value=9.2e-10 Score=104.39 Aligned_cols=157 Identities=15% Similarity=0.145 Sum_probs=105.6
Q ss_pred cCccceEEEecCCCcEEEEECCCCeEEEeCCCCeeEEceec-cCCCcccCCcceeecCC----CCEEEEeCC-Ccccchh
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATE-AEGVPLRFTNDLDIDDE----GNVYFTDSS-TNYQRRN 203 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~-~~~~~~~~~~~l~~d~~----G~ly~td~~-~~~~~~~ 203 (391)
...|.+|++++ +|+|||++....|++++.+ ++ +.+... ........+.+|+++++ |.||++.+. ..
T Consensus 28 l~~P~~ia~~p-dG~l~V~e~~g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~----- 99 (354)
T 3a9g_A 28 LEVPWSIAPLG-GGRYLVTERPGRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE----- 99 (354)
T ss_dssp CSCEEEEEEEE-TTEEEEEETTTEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG-----
T ss_pred CCCCeEEEEcC-CCeEEEEeCCCEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC-----
Confidence 56799999999 7999999988669999854 44 444321 11112346899999996 899999742 00
Q ss_pred heeeecccCCCceEEEEeCCCC-----eEEEec-----cCCCCcceEEEccCCCEEEEEeCC-------------CCeEE
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTK-----QTTVLL-----RNLQFPNGLSLSKDKSFFVFCEGS-------------VGRLH 260 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~-----~~~~~~-----~~~~~~ngia~~~d~~~l~v~et~-------------~~~I~ 260 (391)
......+|.+++.+++ ..+++. .....+++++++|||. ||++... .++|+
T Consensus 100 ------~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ 172 (354)
T 3a9g_A 100 ------GGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKIL 172 (354)
T ss_dssp ------GGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEE
T ss_pred ------CCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEE
Confidence 0011257888887654 123332 2245789999999997 9998532 35899
Q ss_pred EEEeccccC-c----cceeecccCCCCCceEeCC-CCCEEEEEcCCC
Q 016318 261 KYWLIGEKA-G----NLEAFAILPGYPDNVRTNE-KGEFWVAIHCRR 301 (391)
Q Consensus 261 ~~~~~g~~~-g----~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~ 301 (391)
|++.+|.-. + ..++++.--..|.+|++|+ +|++|++.....
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~ 219 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPV 219 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSS
T ss_pred EEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCC
Confidence 998876310 0 2355553223589999999 899999987653
No 86
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.26 E-value=6.3e-09 Score=100.28 Aligned_cols=192 Identities=10% Similarity=0.089 Sum_probs=128.7
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
...+++++++|++++++..++.|..|+.+..+...... .....|.++++++++..+|++.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD--------------------LTGKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE--------------------CSSSSEEEEEEETTTTEEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc--------------------CCCCCeeEEEEcCCCCEEEEEe
Confidence 34568898899977888889999999876222221110 1135678999998545577887
Q ss_pred CCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 150 AYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 150 ~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
...+ |..+|..+++....... ...+.+++++++|+ +|++...... ....+|.|..||..+++.
T Consensus 231 ~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~----------~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 231 WISEDISVIDRKTKLEIRKTDK-----IGLPRGLLLSKDGKELYIAQFSASN----------QESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp TTTTEEEEEETTTTEEEEECCC-----CSEEEEEEECTTSSEEEEEEEESCT----------TCSCCEEEEEEETTTTEE
T ss_pred cCCCcEEEEECCCCcEEEEecC-----CCCceEEEEcCCCCEEEEEECCCCc----------cccCCCeEEEEECCCCcE
Confidence 5544 99999988765432211 12478899999985 5555421000 001357899999988876
Q ss_pred EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEEEEcC
Q 016318 228 TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIHC 299 (391)
Q Consensus 228 ~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwva~~~ 299 (391)
.........+.+++++|+++.+|++....+.|..+++... +..........+.+++++++|+ +|++...
T Consensus 296 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 296 IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK---KVQKSIPVFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT---EEEEEEECSSSEEEEEECTTSSEEEEEECC
T ss_pred EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC---cEEEEecCCCCCCeEEEcCCCCEEEEEecC
Confidence 5554333477899999999989999888899999987642 2111112334577899999998 6666554
No 87
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.26 E-value=7.3e-10 Score=102.86 Aligned_cols=175 Identities=13% Similarity=0.116 Sum_probs=116.8
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY 151 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~ 151 (391)
.+++++++|+ +|+++.+++|++++.+. ........ .......+.++. +++||++.
T Consensus 140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~g-~~~~~~~~--------------------~~~~~~~~~~d~-~g~l~v~t-- 194 (330)
T 3hxj_A 140 ATPIVSEDGT-IYVGSNDNYLYAINPDG-TEKWRFKT--------------------NDAITSAASIGK-DGTIYFGS-- 194 (330)
T ss_dssp SCCEECTTSC-EEEECTTSEEEEECTTS-CEEEEEEC--------------------SSCCCSCCEECT-TCCEEEES--
T ss_pred eeeEEcCCCE-EEEEcCCCEEEEECCCC-CEeEEEec--------------------CCCceeeeEEcC-CCEEEEEe--
Confidence 4568888888 99999999999998871 11111100 012233456776 78999998
Q ss_pred CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEec
Q 016318 152 FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 152 ~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 231 (391)
.+|+++|..+.....+. .. ......++++++|+||+++.. ++|+++|+++.......
T Consensus 195 ~~l~~~d~~g~~~~~~~--~~---~~~~~~~~~~~~g~l~v~t~~------------------~gl~~~~~~g~~~~~~~ 251 (330)
T 3hxj_A 195 DKVYAINPDGTEKWNFY--AG---YWTVTRPAISEDGTIYVTSLD------------------GHLYAINPDGTEKWRFK 251 (330)
T ss_dssp SSEEEECTTSCEEEEEC--CS---SCCCSCCEECTTSCEEEEETT------------------TEEEEECTTSCEEEEEE
T ss_pred CEEEEECCCCcEEEEEc--cC---CcceeceEECCCCeEEEEcCC------------------CeEEEECCCCCEeEEee
Confidence 78999995433322221 11 135778899999999999853 68999997666655544
Q ss_pred cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccC-CCCCceEeCCCCCEEEEEcCC
Q 016318 232 RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP-GYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 232 ~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~-g~p~~i~~d~~G~lwva~~~~ 300 (391)
........++++++++ ||++ +.++.|++++.+| +......++ .....+..|.+|++|+++..+
T Consensus 252 ~~~~~~~~~~~~~~g~-l~v~-t~~ggl~~~d~~g----~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 252 TGKRIESSPVIGNTDT-IYFG-SYDGHLYAINPDG----TEKWNFETGSWIIATPVIDENGTIYFGTRNG 315 (330)
T ss_dssp CSSCCCSCCEECTTSC-EEEE-CTTCEEEEECTTS----CEEEEEECSSCCCSCCEECTTCCEEEECTTS
T ss_pred CCCCccccceEcCCCe-EEEe-cCCCCEEEECCCC----cEEEEEEcCCccccceEEcCCCEEEEEcCCC
Confidence 4434456677877787 9988 5567899997433 221111232 235568899999999998775
No 88
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.25 E-value=9.2e-10 Score=102.21 Aligned_cols=191 Identities=9% Similarity=0.076 Sum_probs=123.0
Q ss_pred CcceEEEccCCCeeEEEec-CCEEEEEeCC---ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 70 GPESMAFDPLGRGPYTGVA-DGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
.|.+++++++|+.+|++.. ++.|..|+.+ ........ .....|.++++++++..|
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~---------------------~~~~~~~~~~~s~dg~~l 143 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV---------------------EGLDGCHSANISPDNRTL 143 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE---------------------CCCTTBCCCEECTTSSEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc---------------------cCCCCceEEEECCCCCEE
Confidence 7999999999997777765 7778888662 11111111 113457889999844468
Q ss_pred EEEECC-CCeEEEeCCC-CeeEEcee-ccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEe
Q 016318 146 YIADAY-FGLMKVGPEG-GLATSLAT-EAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD 221 (391)
Q Consensus 146 ~V~d~~-~gl~~~d~~~-g~~~~~~~-~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d 221 (391)
|+++.. ..|..++..+ ++++.... .........+++++++++|+ +|+++.. ++.+..|+
T Consensus 144 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----------------~~~i~~~~ 206 (343)
T 1ri6_A 144 WVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----------------NSSVDVWE 206 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEE
T ss_pred EEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEE
Confidence 998844 4588888876 65543320 11111123678899999997 7787743 46777777
Q ss_pred C--CCCeEEEec--c----C---CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc--cCCCCCceEeC
Q 016318 222 P--TTKQTTVLL--R----N---LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--LPGYPDNVRTN 288 (391)
Q Consensus 222 ~--~~~~~~~~~--~----~---~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~--~~g~p~~i~~d 288 (391)
. .+++..... . . ...+.+++++||++++|++....+.|..++++.. .++.+.... ..+.|.+++++
T Consensus 207 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~s 285 (343)
T 1ri6_A 207 LKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED-GSVLSKEGFQPTETQPRGFNVD 285 (343)
T ss_dssp SSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-SCCEEEEEEEECSSSCCCEEEC
T ss_pred ecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC-CCceEEeeeecCCCccceEEEC
Confidence 6 345432211 1 1 2245579999999999999877889999987621 122233322 23458999999
Q ss_pred CCCC-EEEEEcC
Q 016318 289 EKGE-FWVAIHC 299 (391)
Q Consensus 289 ~~G~-lwva~~~ 299 (391)
++|+ +|++...
T Consensus 286 ~dg~~l~~~~~~ 297 (343)
T 1ri6_A 286 HSGKYLIAAGQK 297 (343)
T ss_dssp TTSSEEEEECTT
T ss_pred CCCCEEEEecCC
Confidence 9998 6665533
No 89
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.23 E-value=3.9e-09 Score=101.77 Aligned_cols=196 Identities=17% Similarity=0.141 Sum_probs=128.6
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
.|.++++++++.+++++..++.|..|+....+........ ......+.+.++++++ ++++|++.
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~---------------~~~~~~~~v~~~~~~~-~~~~~~s~ 187 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPE---------------KYKKKLGFVETISIPE-HNELWVSQ 187 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCH---------------HHHTTCCEEEEEEEGG-GTEEEEEE
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcc---------------cccccCCceeEEEEcC-CCEEEEEE
Confidence 5778999997775555566778999987622222111000 0111234567889987 78898887
Q ss_pred CCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 150 AYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 150 ~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
...+ |..+|.++++....... ....+..++++++|+ +|++.+. ++.|..||..+++.
T Consensus 188 ~~d~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~-----------------~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 188 MQANAVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSNWI-----------------SEDISVIDRKTKLE 246 (433)
T ss_dssp GGGTEEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEecC-----------------CCcEEEEECCCCcE
Confidence 7644 89999887654432221 123578899999986 5566533 47899999988877
Q ss_pred EEeccCCCCcceEEEccCCCEEEEEeC-------CCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEEEEcC
Q 016318 228 TVLLRNLQFPNGLSLSKDKSFFVFCEG-------SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIHC 299 (391)
Q Consensus 228 ~~~~~~~~~~ngia~~~d~~~l~v~et-------~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwva~~~ 299 (391)
.........+.+++++|+++.++++.. ..+.|+.+++... +.......++.+.+++++++|+ +|++...
T Consensus 247 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 247 IRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE---KLIDTIGPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp EEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT---EEEEEEEEEECEEEEEECSSTTEEEEEETT
T ss_pred EEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC---cEEeeccCCCCcceEEECCCCCEEEEEecC
Confidence 665555556889999999998888864 3457888886542 2211122244677899999996 7777555
Q ss_pred CCchhh
Q 016318 300 RRSLYS 305 (391)
Q Consensus 300 ~~~~~~ 305 (391)
...+..
T Consensus 324 ~~~v~v 329 (433)
T 3bws_A 324 CSKIEV 329 (433)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 544433
No 90
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.21 E-value=1.2e-08 Score=96.80 Aligned_cols=176 Identities=14% Similarity=0.162 Sum_probs=121.0
Q ss_pred eeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCC-eEEEeCC
Q 016318 82 GPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFG-LMKVGPE 160 (391)
Q Consensus 82 ~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~ 160 (391)
++.++..++.|..|+....+...... ....|.++++++++..||++....+ |..+|..
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~---------------------~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~ 62 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIP---------------------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE---------------------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETT
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEee---------------------cCCCcceEEECCCCCEEEEECCCCCeEEEEECC
Confidence 45667788999999876322221110 1245789999984445777765544 9999998
Q ss_pred CCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccCCCCcce
Q 016318 161 GGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNG 239 (391)
Q Consensus 161 ~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ng 239 (391)
+++........ ..++.++++++|+ +|++.+. ++.|..||.++++..........+.+
T Consensus 63 ~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~-----------------~~~v~v~d~~~~~~~~~~~~~~~~~~ 120 (391)
T 1l0q_A 63 TNNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMA-----------------SSTLSVIDTTSNTVAGTVKTGKSPLG 120 (391)
T ss_dssp TTEEEEEEECS-----SSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSEEE
T ss_pred CCeEEEEEECC-----CCccceEECCCCCEEEEEECC-----------------CCEEEEEECCCCeEEEEEeCCCCcce
Confidence 88765433221 1678999999986 7777643 47899999999887666655567899
Q ss_pred EEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEEEEcCCCch
Q 016318 240 LSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIHCRRSL 303 (391)
Q Consensus 240 ia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~ 303 (391)
+++++|++.+|++....+.|+.+++... +..........|..++++++|+ +|++......+
T Consensus 121 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 121 LALSPDGKKLYVTNNGDKTVSVINTVTK---AVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSI 182 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCC---cEEEEEecCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 9999999999888888889999986542 2211112224567899999997 56665554443
No 91
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.20 E-value=2.9e-09 Score=96.29 Aligned_cols=185 Identities=10% Similarity=0.011 Sum_probs=120.9
Q ss_pred cccccCcceEEEccCCCeeEEEec---CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC
Q 016318 65 LNQIQGPESMAFDPLGRGPYTGVA---DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (391)
Q Consensus 65 ~~~~~gPe~i~~d~~G~~ly~~~~---~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~ 141 (391)
-+.-..|++++++++|. +|.++. ++.|.++|...-+...... . ...-.+.|++++
T Consensus 17 ~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~------------------l-~~~~fgeGi~~~-- 74 (266)
T 2iwa_A 17 HDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHK------------------M-DDSYFGEGLTLL-- 74 (266)
T ss_dssp CCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEE------------------C-CTTCCEEEEEEE--
T ss_pred CCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEe------------------c-CCCcceEEEEEe--
Confidence 34334689999998875 888764 4799999987322222211 0 001234567776
Q ss_pred CCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 142 TGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 142 ~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
+++||++++..+ ++++|+++.++..-.. .+ .+.+..+.+|| .+|+++. ++.|..
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~~v~~~i~--~g----~~~g~glt~Dg~~l~vs~g------------------s~~l~v 130 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTLSNIKNFT--HQ----MKDGWGLATDGKILYGSDG------------------TSILYE 130 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTTEEEEEEE--CC----SSSCCEEEECSSSEEEECS------------------SSEEEE
T ss_pred CCEEEEEEecCCEEEEEECCCCcEEEEEE--CC----CCCeEEEEECCCEEEEECC------------------CCeEEE
Confidence 579999998866 9999999875432111 11 13444455555 7999873 379999
Q ss_pred EeCCCCeEEEecc------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccC--------------
Q 016318 220 YDPTTKQTTVLLR------NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP-------------- 279 (391)
Q Consensus 220 ~d~~~~~~~~~~~------~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~-------------- 279 (391)
+|+++.+...-.. ....+|++.+. |++ +|++....+.|.+++.+. ++..-..+++
T Consensus 131 iD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~t---g~V~~~I~~~g~~~~~~~~~~~~~ 205 (266)
T 2iwa_A 131 IDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE-VWANIWQTDCIARISAKD---GTLLGWILLPNLRKKLIDEGFRDI 205 (266)
T ss_dssp ECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTT---CCEEEEEECHHHHHHHHHTTCTTC
T ss_pred EECCCCcEEEEEEECCCCcccccceeEEEE-CCE-EEEecCCCCeEEEEECCC---CcEEEEEECCCccccccccccccc
Confidence 9999876433221 23468999887 774 999988889999999654 2222111221
Q ss_pred CCCCceEeCCCCC-EEEEEcCC
Q 016318 280 GYPDNVRTNEKGE-FWVAIHCR 300 (391)
Q Consensus 280 g~p~~i~~d~~G~-lwva~~~~ 300 (391)
..|.+|+.+++|+ +||+....
T Consensus 206 ~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 206 DVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp CCEEEEEEETTTTEEEEEETTC
T ss_pred CceEEEEEcCCCCEEEEECCCC
Confidence 2467999999886 88886553
No 92
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.19 E-value=4.4e-09 Score=98.78 Aligned_cols=154 Identities=16% Similarity=0.154 Sum_probs=105.6
Q ss_pred cCccceEEEecCCCcEEEEECCC-CeEEEeCCCCeeEEceec--cCCCcccCCcceeecC----CCCEEEEeCCCcccch
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYF-GLMKVGPEGGLATSLATE--AEGVPLRFTNDLDIDD----EGNVYFTDSSTNYQRR 202 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~-gl~~~d~~~g~~~~~~~~--~~~~~~~~~~~l~~d~----~G~ly~td~~~~~~~~ 202 (391)
...|.+|++.+ +|+|||+.... .|+++++++++.+.+... ........+.+|++++ +|.||++.+.
T Consensus 31 L~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~------ 103 (347)
T 3das_A 31 LNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS------ 103 (347)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC------
T ss_pred CCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec------
Confidence 57899999999 79999999744 499999877766544321 1111235688999998 4899997532
Q ss_pred hheeeecccCCCceEEEEeCCCC--------eEEEecc-----CCCCcceEEEccCCCEEEEEeC-------------CC
Q 016318 203 NFMQLVFSAEDTGRVLKYDPTTK--------QTTVLLR-----NLQFPNGLSLSKDKSFFVFCEG-------------SV 256 (391)
Q Consensus 203 ~~~~~~~~~~~~g~l~~~d~~~~--------~~~~~~~-----~~~~~ngia~~~d~~~l~v~et-------------~~ 256 (391)
...++|.||....+ +.+++.. ...+.+.|+++|||. |||+.. ..
T Consensus 104 ---------~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~ 173 (347)
T 3das_A 104 ---------ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLG 173 (347)
T ss_dssp ---------SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCST
T ss_pred ---------CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCC
Confidence 12468888865541 2333332 234567799999997 999842 35
Q ss_pred CeEEEEEeccccC-----ccceeecccCCCCCceEeCCCCCEEEEEcCC
Q 016318 257 GRLHKYWLIGEKA-----GNLEAFAILPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 257 ~~I~~~~~~g~~~-----g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
++|+|++.+|... ...++|+.--..|.+|++|++|.+|++.+..
T Consensus 174 G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~ 222 (347)
T 3das_A 174 GKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQ 222 (347)
T ss_dssp TCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCS
T ss_pred CEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCC
Confidence 7999999887410 1235555311248899999999999998764
No 93
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.18 E-value=6.3e-09 Score=104.37 Aligned_cols=188 Identities=14% Similarity=0.083 Sum_probs=123.7
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeC--CceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec----CCC
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDG--LKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK----KTG 143 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~----~~g 143 (391)
.|.+++++++|+.+|++..++.|..|+. ...+..... ..+..|.+++|++ ++.
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i---------------------~~g~~p~~va~sp~~~~dg~ 238 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI---------------------KIGIEARSVESSKFKGYEDR 238 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE---------------------ECCSEEEEEEECCSTTCTTT
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE---------------------ecCCCcceEEeCCCcCCCCC
Confidence 3889999999999999999999999998 432222211 1245689999998 778
Q ss_pred cEEEEECC-CCeEEEeCCCCeeEEceec----cCCC---cccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCC
Q 016318 144 DLYIADAY-FGLMKVGPEGGLATSLATE----AEGV---PLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 144 ~L~V~d~~-~gl~~~d~~~g~~~~~~~~----~~~~---~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
.||+++.. ..|..+|..+++....... .++. +...+..+++++++. +|++.. .+
T Consensus 239 ~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-----------------~~ 301 (543)
T 1nir_A 239 YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-----------------ET 301 (543)
T ss_dssp EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-----------------TT
T ss_pred EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC-----------------CC
Confidence 89999865 4588899888764432221 1110 112466788888765 555543 25
Q ss_pred ceEEEEeCCCCeEEE--eccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCC--CC-CceE-eC
Q 016318 215 GRVLKYDPTTKQTTV--LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG--YP-DNVR-TN 288 (391)
Q Consensus 215 g~l~~~d~~~~~~~~--~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g--~p-~~i~-~d 288 (391)
+.|..+|..+.+... ......+|.+++++||++++|++....+.|..++.+. ++......... .| .++. .+
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t---g~l~~~i~~g~~ph~g~g~~~~~ 378 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD---RRLSALVDVGKTPHPGRGANFVH 378 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSSSBCCTTCEEEEE
T ss_pred CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC---CeEEEeeccCCCCCCCCCcccCC
Confidence 789999987653211 1233467999999999999999987788999998654 22211111111 12 2333 35
Q ss_pred CC-CCEEEEEc
Q 016318 289 EK-GEFWVAIH 298 (391)
Q Consensus 289 ~~-G~lwva~~ 298 (391)
++ |.+|++..
T Consensus 379 p~~g~~~~s~~ 389 (543)
T 1nir_A 379 PKYGPVWSTSH 389 (543)
T ss_dssp TTTEEEEEEEB
T ss_pred CCCccEEEecc
Confidence 65 67888765
No 94
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.17 E-value=1.7e-09 Score=99.95 Aligned_cols=164 Identities=10% Similarity=0.080 Sum_probs=110.8
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCCCeeEEcee-ccC--CCcccCCcceee---cCCCCEEEE-eCCCcccc
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGGLATSLAT-EAE--GVPLRFTNDLDI---DDEGNVYFT-DSSTNYQR 201 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~-~~~--~~~~~~~~~l~~---d~~G~ly~t-d~~~~~~~ 201 (391)
...|-++++|+.++.+|+++.+.| |.++++.++..+.+.. ... +.+...+.+|.+ |++|.||+. +.+..|..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 567889999976889999998866 9999998765554421 111 334456789999 789999994 43222211
Q ss_pred hhheeeecccCCCceEEEEeCC---CCeEEEecc--------------CCCCcceEEEccCCCEEEEEeCCC-CeEEEEE
Q 016318 202 RNFMQLVFSAEDTGRVLKYDPT---TKQTTVLLR--------------NLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYW 263 (391)
Q Consensus 202 ~~~~~~~~~~~~~g~l~~~d~~---~~~~~~~~~--------------~~~~~ngia~~~d~~~l~v~et~~-~~I~~~~ 263 (391)
. -....+...|++||.. +++.....+ ....+|+++++++|+ +||+++.. ..|+|++
T Consensus 92 ~-----g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 92 A-----DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVS 165 (334)
T ss_dssp T-----SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEEC
T ss_pred c-----ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEe
Confidence 0 0011235679999988 665433221 223589999999999 99999999 9999999
Q ss_pred eccccCccceeec-ccC-----CCCCceEeCCCCCEEEEEcCCCc
Q 016318 264 LIGEKAGNLEAFA-ILP-----GYPDNVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 264 ~~g~~~g~~~~~~-~~~-----g~p~~i~~d~~G~lwva~~~~~~ 302 (391)
.+|.. ...|. ..| -.++||+..++|+++++....+.
T Consensus 166 pdG~~---~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~ 207 (334)
T 2p9w_A 166 ADGKT---VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA 207 (334)
T ss_dssp TTSCC---EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS
T ss_pred CCCCE---EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe
Confidence 87742 23332 111 13779999999997766555444
No 95
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.17 E-value=9.1e-09 Score=95.13 Aligned_cols=184 Identities=14% Similarity=0.022 Sum_probs=116.4
Q ss_pred CcceEEEccCCCeeEEEe-cCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 70 GPESMAFDPLGRGPYTGV-ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~-~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
.|.+++++++|+.+|++. .++.|..++....+........ ........|.++++++++..||++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~s~dg~~l~~~ 99 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS---------------TPEERVKSLFGAALSPDGKTLAIY 99 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC---------------BTTEEEECTTCEEECTTSSEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC---------------CcccccccccceEECCCCCEEEEE
Confidence 499999999997666654 5689999987622222111000 000001268899999854578998
Q ss_pred E------------CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCc
Q 016318 149 D------------AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 149 d------------~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
+ ....|..+|.++++....... + ..+.+++++++|+ +|+++ +
T Consensus 100 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~dg~~l~~~~--------------------~ 154 (337)
T 1pby_B 100 ESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--P---RQITMLAWARDGSKLYGLG--------------------R 154 (337)
T ss_dssp EEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--C---SSCCCEEECTTSSCEEEES--------------------S
T ss_pred ecccccccccccccCceEEEEECCCCcEEEEEeC--C---CCcceeEECCCCCEEEEeC--------------------C
Confidence 6 235699999988765433221 1 2578899999996 77773 5
Q ss_pred eEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCC-----------------------eEEEEEeccccCccc
Q 016318 216 RVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG-----------------------RLHKYWLIGEKAGNL 272 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~-----------------------~I~~~~~~g~~~g~~ 272 (391)
.+..+|.++++..........+..++++||++.+|++....+ .|+.+++... +.
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~---~~ 231 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG---EM 231 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC---CE
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC---Cc
Confidence 799999998877554433332345578999988887754444 3566665432 22
Q ss_pred ee--ecccCCCCCceEeCCCCC-EEEE
Q 016318 273 EA--FAILPGYPDNVRTNEKGE-FWVA 296 (391)
Q Consensus 273 ~~--~~~~~g~p~~i~~d~~G~-lwva 296 (391)
.. +......|.+++++++|+ +|++
T Consensus 232 ~~~~~~~~~~~~~~~~~s~dg~~l~~~ 258 (337)
T 1pby_B 232 AMREVRIMDVFYFSTAVNPAKTRAFGA 258 (337)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred eEeecCCCCCceeeEEECCCCCEEEEe
Confidence 21 111223567799999998 5665
No 96
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.16 E-value=8e-10 Score=108.23 Aligned_cols=180 Identities=12% Similarity=0.162 Sum_probs=114.5
Q ss_pred ceeccccccCcceEEEccCCCeeEEEecCC-EEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEE
Q 016318 61 EIKFLNQIQGPESMAFDPLGRGPYTGVADG-RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (391)
Q Consensus 61 ~~~~~~~~~gPe~i~~d~~G~~ly~~~~~g-~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~ 137 (391)
+.+.. .+..|.+|+++++|+ +|++...| +|++++.. ....+...... .+ .....+-++||+
T Consensus 20 ~~~a~-~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~---~~-----------~~~g~~Gllgia 83 (454)
T 1cru_A 20 KVILS-NLNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEI---VN-----------DADGQNGLLGFA 83 (454)
T ss_dssp EEEEC-CCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTC---CC-----------CTTSSCSEEEEE
T ss_pred EEEEC-CCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCcc---cc-----------ccCCCCceeEEE
Confidence 34433 478999999999999 77777765 79999764 34444332210 00 001135588999
Q ss_pred EecC---CCcEEEEECC-------------CCeEEEeCCC--Ce---eEEceeccCCCcccCCcceeecCCCCEEEEeCC
Q 016318 138 FDKK---TGDLYIADAY-------------FGLMKVGPEG--GL---ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSS 196 (391)
Q Consensus 138 ~d~~---~g~L~V~d~~-------------~gl~~~d~~~--g~---~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~ 196 (391)
++++ ++.|||+... ..|++++.+. +. .+.+..........+++.|++++||+||++...
T Consensus 84 ~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 84 FHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp ECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 9985 6889999853 3488887543 22 233333222223457899999999999999632
Q ss_pred Ccccc-hh-hee-------------eecccCCCceEEEEeCCCC-----------eEEEeccCCCCcceEEEccCCCEEE
Q 016318 197 TNYQR-RN-FMQ-------------LVFSAEDTGRVLKYDPTTK-----------QTTVLLRNLQFPNGLSLSKDKSFFV 250 (391)
Q Consensus 197 ~~~~~-~~-~~~-------------~~~~~~~~g~l~~~d~~~~-----------~~~~~~~~~~~~ngia~~~d~~~l~ 250 (391)
..... .+ +.. ..-.....|+|+|+++++. ..+++..++..|.|++++++|+ ||
T Consensus 164 ~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~ 242 (454)
T 1cru_A 164 QGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LL 242 (454)
T ss_dssp TTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EE
T ss_pred CCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EE
Confidence 11100 00 000 0000123589999999765 4567778889999999999887 99
Q ss_pred EEeCCCC
Q 016318 251 FCEGSVG 257 (391)
Q Consensus 251 v~et~~~ 257 (391)
++|....
T Consensus 243 ~~d~g~~ 249 (454)
T 1cru_A 243 QSEQGPN 249 (454)
T ss_dssp EEEECSS
T ss_pred EEecCCC
Confidence 9987543
No 97
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.15 E-value=1.2e-08 Score=91.65 Aligned_cols=190 Identities=11% Similarity=0.100 Sum_probs=124.4
Q ss_pred cCcceEEEccCCCeeEE-EecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 69 QGPESMAFDPLGRGPYT-GVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~-~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
..+.+++++++++.+|+ ...+++|++++.+. ....... ...+..+-||+++. ++.+||
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g-~v~~~i~-------------------l~g~~D~EGIa~~~-~g~~~v 85 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNG-DLIRTIP-------------------LDFVKDLETIEYIG-DNQFVI 85 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTC-CEEEEEE-------------------CSSCSSEEEEEECS-TTEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCC-CEEEEEe-------------------cCCCCChHHeEEeC-CCEEEE
Confidence 46889999998777886 66678999999871 1111110 01246788999997 788999
Q ss_pred EECCC-CeEEEeCCC-CeeEEcee---cc-CCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 148 ADAYF-GLMKVGPEG-GLATSLAT---EA-EGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 148 ~d~~~-gl~~~d~~~-g~~~~~~~---~~-~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
++... .++.++... +.+..+.. .. ....-....+|+.|+++ ++|++... ...+|+.+
T Consensus 86 s~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~ 149 (255)
T 3qqz_A 86 SDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKV 149 (255)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEE
T ss_pred EECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEE
Confidence 98664 466665432 22222211 11 11223356899999976 79998633 12368888
Q ss_pred e--CCCCeEEEecc-------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccC-C---------C
Q 016318 221 D--PTTKQTTVLLR-------NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP-G---------Y 281 (391)
Q Consensus 221 d--~~~~~~~~~~~-------~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~-g---------~ 281 (391)
+ +.+....+... .+..+.+++++|....+|+....+.+|..++.+|. ...+..+. | .
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~----~~~~~~L~~g~~~l~~~~~q 225 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE----VIGEMSLTKGSRGLSHNIKQ 225 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECSTTGGGCSSCCCS
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC----EEEEEEcCCccCCcccccCC
Confidence 7 22333443311 23467899999998889999888999999987764 22222222 1 5
Q ss_pred CCceEeCCCCCEEEEEcC
Q 016318 282 PDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 282 p~~i~~d~~G~lwva~~~ 299 (391)
|.||++|++|++||+.-.
T Consensus 226 pEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 226 AEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp EEEEEECTTCCEEEEETT
T ss_pred CCeeEECCCCCEEEEcCC
Confidence 789999999999998543
No 98
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.15 E-value=2.7e-08 Score=93.73 Aligned_cols=202 Identities=14% Similarity=0.104 Sum_probs=120.1
Q ss_pred cCcceEEEccCCCeeEEEe-cCCEEEEEeCC---ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 69 QGPESMAFDPLGRGPYTGV-ADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~-~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
..|..+++ +|+.+|++. .++.|..|+.. ....+..... ..+.+. . ........|+++++++++..
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~-----~~g~~~-~---~~~~~~~~~~~~~~spdg~~ 168 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIE-----FKGSGP-D---KERQTMPHLHCVRITPDGKY 168 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEE-----CCCCCS-C---TTTCSSCCEEEEEECTTSSE
T ss_pred CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEE-----ccCCCC-C---ccccCCCcceEEEECCCCCE
Confidence 46888888 677677776 46778877653 1111100000 000000 0 00111345789999994334
Q ss_pred EEEEECCCC-eEEE--eCCCC----e-eEEc-e-eccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCC
Q 016318 145 LYIADAYFG-LMKV--GPEGG----L-ATSL-A-TEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 145 L~V~d~~~g-l~~~--d~~~g----~-~~~~-~-~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
||+++...+ +..+ +..++ + +... . ..........|++++++++|+ +|+++..
T Consensus 169 l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~----------------- 231 (361)
T 3scy_A 169 LLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI----------------- 231 (361)
T ss_dssp EEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------
T ss_pred EEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----------------
Confidence 999987644 5555 54444 2 2211 0 000011124678999999996 7887743
Q ss_pred CceEEEEeCCCCeEEEec------cCCCCcceEEEccCCCEEEEEeCC-CCeEEEEEeccccCccceeeccc--CCCCCc
Q 016318 214 TGRVLKYDPTTKQTTVLL------RNLQFPNGLSLSKDKSFFVFCEGS-VGRLHKYWLIGEKAGNLEAFAIL--PGYPDN 284 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~------~~~~~~ngia~~~d~~~l~v~et~-~~~I~~~~~~g~~~g~~~~~~~~--~g~p~~ 284 (391)
++.|..|+.++++.+.+. .....|.+++++|||++||++... .+.|..|+++.. .++.+..... ...|.+
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-~g~~~~~~~~~~g~~~~~ 310 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-NGTLTKVGYQLTGIHPRN 310 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT-TCCEEEEEEEECSSCCCE
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC-CCcEEEeeEecCCCCCce
Confidence 467888887777664432 223457799999999999999887 678888887521 2333333222 247899
Q ss_pred eEeCCCCC-EEEEEcC
Q 016318 285 VRTNEKGE-FWVAIHC 299 (391)
Q Consensus 285 i~~d~~G~-lwva~~~ 299 (391)
++++++|+ +|++...
T Consensus 311 ~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 311 FIITPNGKYLLVACRD 326 (361)
T ss_dssp EEECTTSCEEEEEETT
T ss_pred EEECCCCCEEEEEECC
Confidence 99999998 6666544
No 99
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.13 E-value=4e-09 Score=95.37 Aligned_cols=158 Identities=15% Similarity=0.090 Sum_probs=111.5
Q ss_pred cccCcceEEEccCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 67 QIQGPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
.-..+|+++++ |+.+|+.++ ++.+..+|.+..+.+.... .. .+.+.|++.| +++|
T Consensus 64 ~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~------------------~g--~~~g~glt~D--g~~l 119 (266)
T 2iwa_A 64 DSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFT------------------HQ--MKDGWGLATD--GKIL 119 (266)
T ss_dssp TTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEE------------------CC--SSSCCEEEEC--SSSE
T ss_pred CCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEE------------------CC--CCCeEEEEEC--CCEE
Confidence 34567888887 344776665 5899999987544443321 00 1234555554 6789
Q ss_pred EEEECCCCeEEEeCCCCeeEEcee-ccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 146 YIADAYFGLMKVGPEGGLATSLAT-EAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 146 ~V~d~~~gl~~~d~~~g~~~~~~~-~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
|+++..+.|..+|+++.++..-.. ...+.+...+|.+... +|.+|++... ++.|.++|+++
T Consensus 120 ~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~-----------------~~~V~vID~~t 181 (266)
T 2iwa_A 120 YGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ-----------------TDCIARISAKD 181 (266)
T ss_dssp EEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEEETTT
T ss_pred EEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC-----------------CCeEEEEECCC
Confidence 999854559999999876543322 2234456679999888 7899998854 47899999999
Q ss_pred CeEEEecc--CC------------CCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 225 KQTTVLLR--NL------------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 225 ~~~~~~~~--~~------------~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
+++....+ ++ ..||||+++++++.+||+.....+++.+++..
T Consensus 182 g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 182 GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 98754432 11 36799999999999999998889999998764
No 100
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.10 E-value=7.3e-09 Score=96.39 Aligned_cols=204 Identities=17% Similarity=0.088 Sum_probs=113.3
Q ss_pred CcceEEEccCCCeeEEEe-cCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 70 GPESMAFDPLGRGPYTGV-ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~-~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
+|.+++++++|+.+|+.. .++.|..++....+........ . ........|.++++++++..||++
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~-----~---------~~~~~~~~~~~~~~spdg~~l~~~ 109 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS-----S---------VPGEVGRSMYSFAISPDGKEVYAT 109 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC-----C---------STTEEEECSSCEEECTTSSEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc-----c---------ccccccccccceEECCCCCEEEEE
Confidence 699999999998677654 5789999987622221111000 0 000002337899999855568888
Q ss_pred ECC------------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcc--cchhh-eeeecccC-
Q 016318 149 DAY------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNY--QRRNF-MQLVFSAE- 212 (391)
Q Consensus 149 d~~------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~--~~~~~-~~~~~~~~- 212 (391)
+.. ..|..+|.++++.......... ...+.+++++++|++|+++.. .+ ..... ....+...
T Consensus 110 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~l~~~~~~-i~~~d~~~~~~~~~~~~~~ 186 (349)
T 1jmx_B 110 VNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGSLYVAGPD-IYKMDVKTGKYTVALPLRN 186 (349)
T ss_dssp EEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSCEEEESSS-EEEECTTTCCEEEEECSTT
T ss_pred cccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeECCCCcEEEccCc-EEEEeCCCCceeccccccc
Confidence 743 4588999877543221111111 124678889999998875421 10 00000 00000000
Q ss_pred --------------------------------------------CCceEEEEeCCCCeEEEec--cCCCCcceEEEcc-C
Q 016318 213 --------------------------------------------DTGRVLKYDPTTKQTTVLL--RNLQFPNGLSLSK-D 245 (391)
Q Consensus 213 --------------------------------------------~~g~l~~~d~~~~~~~~~~--~~~~~~ngia~~~-d 245 (391)
....++.+|..+++++.+. .....+.+++++| |
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~d 266 (349)
T 1jmx_B 187 WNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKD 266 (349)
T ss_dssp CCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSC
T ss_pred cCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCC
Confidence 0001222444444443332 1123567888889 9
Q ss_pred CCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEEE
Q 016318 246 KSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVA 296 (391)
Q Consensus 246 ~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwva 296 (391)
++.+|++ .++|++++++. ++..........|.+++++++|+ +|++
T Consensus 267 g~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 267 PNQIYGV---LNRLAKYDLKQ---RKLIKAANLDHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp TTEEEEE---ESEEEEEETTT---TEEEEEEECSSCCCEEEECSSSSCEEEE
T ss_pred CCEEEEE---cCeEEEEECcc---CeEEEEEcCCCCccceEECCCCCEEEEe
Confidence 9988888 56899998654 22211122345688999999986 6664
No 101
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.09 E-value=3.5e-08 Score=98.89 Aligned_cols=184 Identities=9% Similarity=-0.038 Sum_probs=123.7
Q ss_pred EEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCe
Q 016318 75 AFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (391)
Q Consensus 75 ~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl 154 (391)
+++++|.++.++..++.|..||....+...... ....|+++++++++..||+++....|
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~---------------------~g~~~~~v~~spdg~~l~v~~~d~~V 202 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID---------------------TGYAVHISRMSASGRYLLVIGRDARI 202 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEE---------------------CSTTEEEEEECTTSCEEEEEETTSEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEe---------------------cCcccceEEECCCCCEEEEECCCCeE
Confidence 478888866666778899999887322222110 12238899999966679999887669
Q ss_pred EEEeC--CCCeeEEceeccCCCcccCCcceeecC----CCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 155 MKVGP--EGGLATSLATEAEGVPLRFTNDLDIDD----EGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 155 ~~~d~--~~g~~~~~~~~~~~~~~~~~~~l~~d~----~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
..+|. .+++...-.. .+ ..|.++++++ +|+ +|+++.. .+.+..+|..+++.
T Consensus 203 ~v~D~~~~t~~~~~~i~--~g---~~p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 203 DMIDLWAKEPTKVAEIK--IG---IEARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEP 260 (543)
T ss_dssp EEEETTSSSCEEEEEEE--CC---SEEEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCE
T ss_pred EEEECcCCCCcEEEEEe--cC---CCcceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEecccccc
Confidence 99999 6665332111 12 3689999999 985 6776632 36788899888775
Q ss_pred EEeccC------------CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EE
Q 016318 228 TVLLRN------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FW 294 (391)
Q Consensus 228 ~~~~~~------------~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lw 294 (391)
...... -..+.+|++++++..++++....+.|+.++....+.-....+ .....|.++.++++|+ ++
T Consensus 261 ~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 261 KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEE
T ss_pred ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEE
Confidence 443321 124568999999998999988889999999765322111111 2234789999999999 56
Q ss_pred EEEcCCCc
Q 016318 295 VAIHCRRS 302 (391)
Q Consensus 295 va~~~~~~ 302 (391)
++......
T Consensus 340 va~~~~~~ 347 (543)
T 1nir_A 340 TAANNSNK 347 (543)
T ss_dssp EEEGGGTE
T ss_pred EEecCCCe
Confidence 66554433
No 102
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.06 E-value=2.8e-07 Score=84.82 Aligned_cols=188 Identities=10% Similarity=-0.021 Sum_probs=125.6
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCcee--EEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWT--DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
...++++.++|+.++++..+|.|..|+..... ..... .........+++++++..|++
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~--------------------~~~~~~i~~~~~~~~~~~l~~ 158 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL--------------------TSSAPACYALAISPDSKVCFS 158 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE--------------------ECSSSCEEEEEECTTSSEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec--------------------ccCCCceEEEEECCCCCEEEE
Confidence 45678999999989999999999999876211 11111 011244678899884344566
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
+.....|..+|..+++........ ...+..++++++|+..++.+. +|.+..||..+++.
T Consensus 159 ~~~dg~v~~~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~ 217 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQTLVRQFQGH----TDGASCIDISNDGTKLWTGGL-----------------DNTVRSWDLREGRQ 217 (337)
T ss_dssp EETTSCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEE
T ss_pred EeCCCcEEEEeCCCCceeeeeecc----cCceEEEEECCCCCEEEEEec-----------------CCcEEEEECCCCce
Confidence 665566999999887544322211 234678899999977666533 57899999988876
Q ss_pred EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCc
Q 016318 228 TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 228 ~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~ 302 (391)
............++++|+++.++++ +..+.|..+++.... ...+....+....++++++|+++++......
T Consensus 218 ~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 218 LQQHDFTSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EeeecCCCceEEEEECCCCCEEEEE-cCCCcEEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCCc
Confidence 5555444567789999999977766 456789998876532 2222223344567889999997666554433
No 103
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=1.9e-08 Score=90.13 Aligned_cols=153 Identities=18% Similarity=0.166 Sum_probs=108.2
Q ss_pred CcceEEEccCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..|+++.+ |+.+|+.++ ++.++++|.+..+.+.... . .+.+.|++.| ++.||++
T Consensus 88 FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~------------------~---~~eG~glt~d--g~~L~~S 142 (262)
T 3nol_A 88 FGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFN------------------Y---DGEGWGLTHN--DQYLIMS 142 (262)
T ss_dssp CEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEE------------------C---SSCCCCEEEC--SSCEEEC
T ss_pred ceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEE------------------C---CCCceEEecC--CCEEEEE
Confidence 34788876 445888775 6889999988544443321 1 1345677765 6789999
Q ss_pred ECCCCeEEEeCCCCeeEEcee-ccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 149 DAYFGLMKVGPEGGLATSLAT-EAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~-~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
|....|..+|+++.++..-.. ...+.+...+|.+... +|.||+.... ++.|.++|++++++
T Consensus 143 dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~-----------------~~~I~vIDp~tG~V 204 (262)
T 3nol_A 143 DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ-----------------TNKIVRIDPETGKV 204 (262)
T ss_dssp CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEECTTTCBE
T ss_pred CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc-----------------CCeEEEEECCCCcE
Confidence 865569999999876543322 2345566778888776 8899998854 46899999999987
Q ss_pred EEeccC-------------CCCcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 016318 228 TVLLRN-------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 265 (391)
Q Consensus 228 ~~~~~~-------------~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~ 265 (391)
....+- ...+||||++|+++.+||+.-.=.+++.+.+.
T Consensus 205 ~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 205 TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 654321 13679999999999999986544577776653
No 104
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.03 E-value=2.8e-08 Score=94.17 Aligned_cols=150 Identities=15% Similarity=0.167 Sum_probs=95.5
Q ss_pred cCccceEEEecCCCcEEEEECCC-CeEEEeCC-CCeeEEceeccCCC-cccCCcceeecCCCC-EEEEeCCCcccchhhe
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYF-GLMKVGPE-GGLATSLATEAEGV-PLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFM 205 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~-gl~~~d~~-~g~~~~~~~~~~~~-~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~ 205 (391)
...|+++++++++..||+++... .|..++.+ +++.+.+... ... ....|.+++++++|+ +|+++..
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~-~~~~~g~~p~~~~~spdg~~l~v~~~~--------- 213 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSV-DAPDPGDHPRWVAMHPTGNYLYALMEA--------- 213 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEE-ECSSTTCCEEEEEECTTSSEEEEEETT---------
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeE-ecCCCCCCCCEeEECCCCCEEEEEECC---------
Confidence 45689999999444589988754 48888887 7766543221 100 124689999999994 7777642
Q ss_pred eeecccCCCce--EEEEeCCCCeEEE----e--c-cCC---C-------CcceEE-EccCCCEEEEEeCCCC-----eEE
Q 016318 206 QLVFSAEDTGR--VLKYDPTTKQTTV----L--L-RNL---Q-------FPNGLS-LSKDKSFFVFCEGSVG-----RLH 260 (391)
Q Consensus 206 ~~~~~~~~~g~--l~~~d~~~~~~~~----~--~-~~~---~-------~~ngia-~~~d~~~l~v~et~~~-----~I~ 260 (391)
++. ++.+|.++++... + . .+. . .+.+++ ++|||++||+++...+ .|.
T Consensus 214 --------~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~ 285 (365)
T 1jof_A 214 --------GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIA 285 (365)
T ss_dssp --------TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEE
T ss_pred --------CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEE
Confidence 234 4455666666431 1 1 111 1 478999 9999999999876554 888
Q ss_pred EEEeccccCcccee---ecc-cCCCCCceEeCC---CCC-EEEEEcC
Q 016318 261 KYWLIGEKAGNLEA---FAI-LPGYPDNVRTNE---KGE-FWVAIHC 299 (391)
Q Consensus 261 ~~~~~g~~~g~~~~---~~~-~~g~p~~i~~d~---~G~-lwva~~~ 299 (391)
.++++. .++... ... ....|.++++++ +|+ ++++...
T Consensus 286 v~~~~~--~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~ 330 (365)
T 1jof_A 286 GFKLRD--CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp EEEECT--TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS
T ss_pred EEEECC--CCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC
Confidence 888752 233332 111 223588899998 687 6666543
No 105
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.01 E-value=2.5e-08 Score=89.38 Aligned_cols=152 Identities=22% Similarity=0.282 Sum_probs=106.9
Q ss_pred CcceEEEccCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..|+++++ |+.+|+.++ ++.++.+|.+..+.+.... . .+.+.|++.| +++||++
T Consensus 97 FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~------------------~---~~eGwGLt~D--g~~L~vS 151 (268)
T 3nok_A 97 FAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTR------------------Y---SGEGWGLCYW--NGKLVRS 151 (268)
T ss_dssp CEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEE------------------C---SSCCCCEEEE--TTEEEEE
T ss_pred ceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEe------------------C---CCceeEEecC--CCEEEEE
Confidence 44888886 334777664 6889999988555444331 1 1345788876 5799999
Q ss_pred ECCCCeEEEeCCCCeeEEce-eccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 149 DAYFGLMKVGPEGGLATSLA-TEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~-~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
|....|..+|+++.++..-. ....+.+..++|.+... +|.||+.... ++.|.++|++++++
T Consensus 152 dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~-----------------s~~I~vIDp~TG~V 213 (268)
T 3nok_A 152 DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH-----------------SSDVLEIDPATGTV 213 (268)
T ss_dssp CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-----------------CSEEEEECTTTCBE
T ss_pred CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC-----------------CCeEEEEeCCCCcE
Confidence 96556999999987654322 22345566788888877 8899998854 46899999999987
Q ss_pred EEecc--------------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEe
Q 016318 228 TVLLR--------------NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWL 264 (391)
Q Consensus 228 ~~~~~--------------~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~ 264 (391)
....+ ...-+||||++|+++.+||+.-.=.+++.+.+
T Consensus 214 ~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 214 VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 65431 11367999999999889998654456666653
No 106
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.01 E-value=8.5e-08 Score=89.07 Aligned_cols=141 Identities=13% Similarity=0.070 Sum_probs=96.2
Q ss_pred eEEEecCCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccC
Q 016318 135 GLRFDKKTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAE 212 (391)
Q Consensus 135 gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~ 212 (391)
|+++.+ ++++|++....+ |..+|.++++....... . ....+.+++++++|+ +|++...
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~--~~~~~~~~~~s~dg~~~~v~~~~---------------- 63 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVM-P--DKFGPGTAMMAPDNRTAYVLNNH---------------- 63 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEEC-S--SCCSSCEEEECTTSSEEEEEETT----------------
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEec-C--CCCCCceeEECCCCCEEEEEeCC----------------
Confidence 445555 788998877655 99999998865433221 1 112478999999996 7888743
Q ss_pred CCceEEEEeCCCCeEEEeccC-------CCCcceEEEccCCCEEEEEeCC-----------CCeEEEEEeccccCcccee
Q 016318 213 DTGRVLKYDPTTKQTTVLLRN-------LQFPNGLSLSKDKSFFVFCEGS-----------VGRLHKYWLIGEKAGNLEA 274 (391)
Q Consensus 213 ~~g~l~~~d~~~~~~~~~~~~-------~~~~ngia~~~d~~~l~v~et~-----------~~~I~~~~~~g~~~g~~~~ 274 (391)
++.|..||.++++....... ...+++++++|||+.+|++... .+.|+.++++..+..+...
T Consensus 64 -~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 142 (349)
T 1jmx_B 64 -YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 142 (349)
T ss_dssp -TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE
T ss_pred -CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee
Confidence 47899999998876543322 2237899999999999998643 4789999976532221111
Q ss_pred ecccCCCCCceEeCCCCCEEEE
Q 016318 275 FAILPGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 275 ~~~~~g~p~~i~~d~~G~lwva 296 (391)
....+..+.+++++++|++|++
T Consensus 143 ~~~~~~~~~~~~~s~dg~l~~~ 164 (349)
T 1jmx_B 143 TFPMPRQVYLMRAADDGSLYVA 164 (349)
T ss_dssp EEECCSSCCCEEECTTSCEEEE
T ss_pred eccCCCcccceeECCCCcEEEc
Confidence 1123445778889999998875
No 107
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.00 E-value=8.8e-08 Score=88.41 Aligned_cols=193 Identities=14% Similarity=0.055 Sum_probs=117.6
Q ss_pred CcceEEEccCCCeeEEEe------------cCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEE
Q 016318 70 GPESMAFDPLGRGPYTGV------------ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~------------~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~ 137 (391)
.|.+++++++|+.+|++. .++.|..++....+...... ....|.+++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~---------------------~~~~~~~~~ 141 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE---------------------APRQITMLA 141 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE---------------------CCSSCCCEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe---------------------CCCCcceeE
Confidence 789999999998888886 46899999876322221110 134578899
Q ss_pred EecCCCcEEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeeccc-----
Q 016318 138 FDKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSA----- 211 (391)
Q Consensus 138 ~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~----- 211 (391)
+++++..||++ ...|+.+|..+++......... .+..++++++|. +|++......-...+.......
T Consensus 142 ~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1pby_B 142 WARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQS-----WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214 (337)
T ss_dssp ECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTT-----TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred ECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccc-----cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccc
Confidence 99844458888 3459999999886543322111 122335566664 5554422110000000000000
Q ss_pred -CCCceEEEEeCCCCeEEEec--cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeC
Q 016318 212 -EDTGRVLKYDPTTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTN 288 (391)
Q Consensus 212 -~~~g~l~~~d~~~~~~~~~~--~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d 288 (391)
.....|..+|.++++..... .....+++++++||++++|++ .+.|++++++. ++.......+..|.+++++
T Consensus 215 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s 288 (337)
T 1pby_B 215 TAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEK---NASIKRVPLPHSYYSVNVS 288 (337)
T ss_dssp GGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTT---TEEEEEEECSSCCCEEEEC
T ss_pred cccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCC---CcCcceecCCCceeeEEEC
Confidence 01126889999988775322 223467889999999999988 47899998654 2221122234568899999
Q ss_pred CCCC-EEEE
Q 016318 289 EKGE-FWVA 296 (391)
Q Consensus 289 ~~G~-lwva 296 (391)
++|+ +|++
T Consensus 289 ~dg~~l~~~ 297 (337)
T 1pby_B 289 TDGSTVWLG 297 (337)
T ss_dssp TTSCEEEEE
T ss_pred CCCCEEEEE
Confidence 9998 6665
No 108
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.00 E-value=5.2e-08 Score=86.46 Aligned_cols=153 Identities=17% Similarity=0.135 Sum_probs=108.5
Q ss_pred CcceEEEccCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..|+++++ |+.+|..++ ++.++++|.+..+.+.... ..+.+.|++.| +++||++
T Consensus 66 fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~---------------------~~~~Gwglt~d--g~~L~vS 120 (243)
T 3mbr_X 66 FGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFR---------------------YPGEGWALTSD--DSHLYMS 120 (243)
T ss_dssp CEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEE---------------------CSSCCCEEEEC--SSCEEEE
T ss_pred ceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEe---------------------CCCCceEEeeC--CCEEEEE
Confidence 45888886 344777654 6889999988555544331 02346777765 6799999
Q ss_pred ECCCCeEEEeCCCCeeEEc-eeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 149 DAYFGLMKVGPEGGLATSL-ATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~-~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
|....|..+|+++.++..- .....+.+..++|.+... +|.+|+.... +..|.++|++++++
T Consensus 121 dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~-----------------s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 121 DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL-----------------TSRIARIDPASGKV 182 (243)
T ss_dssp CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-----------------TTEEEEECTTTCBE
T ss_pred CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC-----------------CCeEEEEECCCCCE
Confidence 9756699999998765432 222345566778888766 8899988854 46899999999987
Q ss_pred EEecc--------------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 016318 228 TVLLR--------------NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 265 (391)
Q Consensus 228 ~~~~~--------------~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~ 265 (391)
....+ ...-+||||++|+++.+||+.-.=.+++.+.+.
T Consensus 183 ~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 183 VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 65431 123679999999999999986544577777654
No 109
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.99 E-value=1.1e-06 Score=81.63 Aligned_cols=196 Identities=14% Similarity=0.101 Sum_probs=125.0
Q ss_pred cccccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 65 ~~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
.+.-.+-.++++.+++..+.+++.|+.|..|+......+..... .......+++++ +++
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~--------------------~~~~~~~~~~sp-dg~ 135 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA--------------------GPVDAWTLAFSP-DSQ 135 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--------------------CTTCCCCEEECT-TSS
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC--------------------CCccEEEEEECC-CCC
Confidence 34334556788999999889999999999998762222211110 123345788998 566
Q ss_pred EEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 145 LYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 145 L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
.+++....| +..++.++++........ ......+++.++|++.++.+. +|.|..||..
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~~----~~~v~~~~~spdg~~lasg~~-----------------dg~i~iwd~~ 194 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEYSLDTR----GKFILSIAYSPDGKYLASGAI-----------------DGIINIFDIA 194 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEEEEECS----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETT
T ss_pred EEEEEcCCCcEEEEEcCCCceeEEecCC----CceEEEEEECCCCCEEEEEcC-----------------CCeEEEEECC
Confidence 555544444 888888876543322211 134678899999987776543 5789999998
Q ss_pred CCeEEEeccC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCc
Q 016318 224 TKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 224 ~~~~~~~~~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~ 302 (391)
+++....... ....+.++++||++.|..+ ...+.|..+++.... ....+....+....++++++|.+.++......
T Consensus 195 ~~~~~~~~~~h~~~v~~l~~spd~~~l~s~-s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 195 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTA-SDDGYIKIYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp TTEEEEEECCCSSCCCEEEECTTSCEEEEE-CTTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCcEEEEEcccCCceeEEEEcCCCCEEEEE-cCCCeEEEEECCCcc--eeEEEcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 8876544433 3356789999999955444 667788888865321 11222222233457889999997776665544
Q ss_pred hhh
Q 016318 303 LYS 305 (391)
Q Consensus 303 ~~~ 305 (391)
+.+
T Consensus 272 v~i 274 (321)
T 3ow8_A 272 VKV 274 (321)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 110
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.94 E-value=1.1e-07 Score=92.04 Aligned_cols=96 Identities=13% Similarity=-0.034 Sum_probs=65.5
Q ss_pred cCCCeeEEEecC-----CEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC-
Q 016318 78 PLGRGPYTGVAD-----GRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY- 151 (391)
Q Consensus 78 ~~G~~ly~~~~~-----g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~- 151 (391)
++++.+|+.... +.|..+|....+..... +.+..| |++++++++.|||++..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I---------------------~vG~~P-gia~SpDgk~lyVan~~~ 139 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMT---------------------DGGFLP-HPVAAEDGSFFAQASTVF 139 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE---------------------EECSSC-EEEECTTSSCEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEE---------------------ECCCCC-ceEECCCCCEEEEEeccc
Confidence 467778887764 68999998844444322 124569 99999977779999852
Q ss_pred ---------CCeEEEeCCCCeeEEceeccCCC---cccCCcceeecCCC-CEEEEeC
Q 016318 152 ---------FGLMKVGPEGGLATSLATEAEGV---PLRFTNDLDIDDEG-NVYFTDS 195 (391)
Q Consensus 152 ---------~gl~~~d~~~g~~~~~~~~~~~~---~~~~~~~l~~d~~G-~ly~td~ 195 (391)
+.|..||+.++++..-....... ....|.++++++|| .+|+++.
T Consensus 140 ~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~ 196 (426)
T 3c75_H 140 ERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF 196 (426)
T ss_dssp EETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC
T ss_pred cccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec
Confidence 34999999987654321111011 12468999999999 6999873
No 111
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.94 E-value=3.8e-07 Score=91.74 Aligned_cols=190 Identities=13% Similarity=0.102 Sum_probs=121.5
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEe----cCC
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFD----KKT 142 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d----~~~ 142 (391)
..|+++++++||+.+|++..++.|..+|.. ..+..... ..+..|.+++++ +++
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i---------------------~~G~~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI---------------------KIGSEARSIETSKMEGWED 255 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE---------------------ECCSEEEEEEECCSTTCTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE---------------------ecCCCCceeEEccccCCCC
Confidence 368999999999999999999999999983 32222211 124569999999 556
Q ss_pred CcEEEEECCCC-eEEEeCCCCeeEEceec----cCCC---cccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCC
Q 016318 143 GDLYIADAYFG-LMKVGPEGGLATSLATE----AEGV---PLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 143 g~L~V~d~~~g-l~~~d~~~g~~~~~~~~----~~~~---~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
..+||++...+ +..+|..+.+....... .++. +...+..+...+++..|+... ..+
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~----------------~~~ 319 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV----------------KET 319 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----------------TTT
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe----------------cCC
Confidence 67999987744 88999887654332111 1110 011334566666654444331 236
Q ss_pred ceEEEEeCCCCeEEEe--ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc-CCC--C-CceE-e
Q 016318 215 GRVLKYDPTTKQTTVL--LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL-PGY--P-DNVR-T 287 (391)
Q Consensus 215 g~l~~~d~~~~~~~~~--~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~-~g~--p-~~i~-~ 287 (391)
|.|..+|..+.+.... .....++.++.+++|++++|++....++|..++.+.. +....... ... | .++. +
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~---kl~~~i~vgg~~Phpg~g~~~~ 396 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG---KLVAIEDTGGQTPHPGRGANFV 396 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT---EEEEEEECSSSSBCCTTCEEEE
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC---cEEEEEeccCcCCCCccceeeE
Confidence 8888888776532221 2334578899999999999999888899999987642 22111122 112 2 3554 4
Q ss_pred CCC-CCEEEEEc
Q 016318 288 NEK-GEFWVAIH 298 (391)
Q Consensus 288 d~~-G~lwva~~ 298 (391)
+++ |.+|++..
T Consensus 397 ~p~~g~v~~t~~ 408 (567)
T 1qks_A 397 HPTFGPVWATSH 408 (567)
T ss_dssp ETTTEEEEEEEB
T ss_pred CCCCCcEEEeCC
Confidence 665 66998764
No 112
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.94 E-value=1.7e-08 Score=98.79 Aligned_cols=164 Identities=13% Similarity=0.226 Sum_probs=104.9
Q ss_pred cCccceEEEecCCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCC----cccCCcceeecC----CCCEEEEeCCCccc
Q 016318 130 CGRPLGLRFDKKTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGV----PLRFTNDLDIDD----EGNVYFTDSSTNYQ 200 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~----~~~~~~~l~~d~----~G~ly~td~~~~~~ 200 (391)
...|.+|++++ +|+|||++...+ |++++..+++.+.+....... ....+.+|++++ +|.||++.+.....
T Consensus 26 l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 56799999999 899999998765 999998767666543221110 123456999998 78999998420000
Q ss_pred chhheeeecccCCCceEEEEeCCC--Ce---EEEecc-----CCCCcceEEEccCCCEEEEEeCC---------------
Q 016318 201 RRNFMQLVFSAEDTGRVLKYDPTT--KQ---TTVLLR-----NLQFPNGLSLSKDKSFFVFCEGS--------------- 255 (391)
Q Consensus 201 ~~~~~~~~~~~~~~g~l~~~d~~~--~~---~~~~~~-----~~~~~ngia~~~d~~~l~v~et~--------------- 255 (391)
... -......+|+|++.+. ++ .+++.. ...++++|++++||+ |||+...
T Consensus 105 ~~~-----~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~~~~~~~~~ 178 (454)
T 1cru_A 105 STD-----KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLAYLFLPNQA 178 (454)
T ss_dssp C-------CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGGGTTSCCCT
T ss_pred CCc-----cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCcccccccccc
Confidence 000 0000024788776432 22 233332 245789999999998 9998432
Q ss_pred -----------------CCeEEEEEecccc-Cc-------cceeecccCCCCCceEeCCCCCEEEEEcCC
Q 016318 256 -----------------VGRLHKYWLIGEK-AG-------NLEAFAILPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 256 -----------------~~~I~~~~~~g~~-~g-------~~~~~~~~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
.++|+|++.+|.- .+ ..++++.--..|.++++|++|++|++.+..
T Consensus 179 ~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 179 QHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGP 248 (454)
T ss_dssp TCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEEECS
T ss_pred ccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEecCC
Confidence 3689999987631 11 245555311247889999999999998754
No 113
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.93 E-value=2.2e-07 Score=87.97 Aligned_cols=153 Identities=13% Similarity=0.059 Sum_probs=104.1
Q ss_pred cCccceEEEecCCCcEEEEECC-------------CC---eEEEeCCCC--eeE-Eceec-cCCCcccCCcceeec-C--
Q 016318 130 CGRPLGLRFDKKTGDLYIADAY-------------FG---LMKVGPEGG--LAT-SLATE-AEGVPLRFTNDLDID-D-- 186 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~-------------~g---l~~~d~~~g--~~~-~~~~~-~~~~~~~~~~~l~~d-~-- 186 (391)
.-.+.++.+|+ .++|||.|.+ .+ |+.+|..++ ++. ++.-+ ..-.+..+.+++++| .
T Consensus 86 lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 86 LTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred eEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 34578999998 8999999976 22 889999988 543 33211 111234688999999 2
Q ss_pred -----CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccC-------------------CCCcceEEE
Q 016318 187 -----EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRN-------------------LQFPNGLSL 242 (391)
Q Consensus 187 -----~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-------------------~~~~ngia~ 242 (391)
++.+|++|++ .++|+.||..+++...+.+. .....||++
T Consensus 165 ~~~c~~~~aYItD~~-----------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaL 227 (381)
T 3q6k_A 165 KGDCSETFVYITNFL-----------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITL 227 (381)
T ss_dssp TTTSCSEEEEEEETT-----------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEE
T ss_pred CCCCCccEEEEEcCC-----------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEe
Confidence 4679999965 46899999888876555421 013568999
Q ss_pred ccC----CCEEEEEeCCCCeEEEEEec---ccc-CccceeecccCCCCCc--eEeC-CCCCEEEEEcCC
Q 016318 243 SKD----KSFFVFCEGSVGRLHKYWLI---GEK-AGNLEAFAILPGYPDN--VRTN-EKGEFWVAIHCR 300 (391)
Q Consensus 243 ~~d----~~~l~v~et~~~~I~~~~~~---g~~-~g~~~~~~~~~g~p~~--i~~d-~~G~lwva~~~~ 300 (391)
+|+ +++||+.-..+.+++++..+ .+. ....+.+.+.+...++ +++| .+|++|++....
T Consensus 228 sp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~ 296 (381)
T 3q6k_A 228 GDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANT 296 (381)
T ss_dssp CCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSS
T ss_pred cCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccC
Confidence 998 89999998888899999732 211 2223333333212343 5676 899999998664
No 114
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.93 E-value=2.4e-06 Score=78.56 Aligned_cols=192 Identities=13% Similarity=0.040 Sum_probs=119.8
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCc---eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLK---WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD- 144 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~- 144 (391)
....+++++++|+.++++. +|.|..|+... ...+... ...........+++++ +++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~------------------~~~~~~~~v~~~~~~~-~~~~ 111 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL------------------DCLNRDNYIRSCKLLP-DGCT 111 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEE------------------ECSCTTSBEEEEEECT-TSSE
T ss_pred CceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecc------------------cccCCCCcEEEEEEcC-CCCE
Confidence 3567899999999777777 99999998651 1111100 0001234567899998 555
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
|+++.....|..+|..+++......... .......+++.++|+..++.+. +|.+..||..+
T Consensus 112 l~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~-----------------dg~v~~~d~~~ 172 (337)
T 1gxr_A 112 LIVGGEASTLSIWDLAAPTPRIKAELTS--SAPACYALAISPDSKVCFSCCS-----------------DGNIAVWDLHN 172 (337)
T ss_dssp EEEEESSSEEEEEECCCC--EEEEEEEC--SSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTT
T ss_pred EEEEcCCCcEEEEECCCCCcceeeeccc--CCCceEEEEECCCCCEEEEEeC-----------------CCcEEEEeCCC
Confidence 5555544558888988775322211111 1124678899999876666532 47899999988
Q ss_pred CeEEEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCch
Q 016318 225 KQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 225 ~~~~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
++...... .......++++|+++.++.+ +..+.|..+++... +.......++....++++++|++.++......+
T Consensus 173 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i 248 (337)
T 1gxr_A 173 QTLVRQFQGHTDGASCIDISNDGTKLWTG-GLDNTVRSWDLREG---RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNV 248 (337)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTT---EEEEEEECSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CceeeeeecccCceEEEEECCCCCEEEEE-ecCCcEEEEECCCC---ceEeeecCCCceEEEEECCCCCEEEEEcCCCcE
Confidence 77554433 33467789999999977666 55678998886542 111111234455678899999866655444333
No 115
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.93 E-value=6.3e-07 Score=80.43 Aligned_cols=198 Identities=13% Similarity=0.164 Sum_probs=119.9
Q ss_pred cCccceEEEecCCCcEEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeee
Q 016318 130 CGRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLV 208 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~ 208 (391)
...+.||+++++++.||+.... ..|+++|+++...+.+. ..+ ..-+.+|+.+.+|.+|+++.+
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~--l~g--~~D~EGIa~~~~g~~~vs~E~------------ 89 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIP--LDF--VKDLETIEYIGDNQFVISDER------------ 89 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEE--CSS--CSSEEEEEECSTTEEEEEETT------------
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEe--cCC--CCChHHeEEeCCCEEEEEECC------------
Confidence 3568899999867789985544 44999999944333331 122 245789999999999999754
Q ss_pred cccCCCceEEEEeCCC-CeEE---EeccCC-CCc-----ceEEEccCCCEEEEEeCCCC-eEEEEEeccccC-ccceeec
Q 016318 209 FSAEDTGRVLKYDPTT-KQTT---VLLRNL-QFP-----NGLSLSKDKSFFVFCEGSVG-RLHKYWLIGEKA-GNLEAFA 276 (391)
Q Consensus 209 ~~~~~~g~l~~~d~~~-~~~~---~~~~~~-~~~-----ngia~~~d~~~l~v~et~~~-~I~~~~~~g~~~-g~~~~~~ 276 (391)
+++++.|+... ++.. ...-.+ ..+ -|+|++++++.+|++.-... +|+.++ |-.. ....+..
T Consensus 90 -----~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~ 162 (255)
T 3qqz_A 90 -----DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISK 162 (255)
T ss_dssp -----TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEE
T ss_pred -----CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeec
Confidence 35677665332 2211 111111 123 69999999988888865444 777776 3111 1122221
Q ss_pred c------c-CCCCCceEeCCC-CCEEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCC
Q 016318 277 I------L-PGYPDNVRTNEK-GEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEG 348 (391)
Q Consensus 277 ~------~-~g~p~~i~~d~~-G~lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g 348 (391)
+ . -.-+.++++|+. |++|+-.... ..++++|.+|
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s--------------------------------------~~L~~~d~~g 204 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHES--------------------------------------RALQEVTLVG 204 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTT--------------------------------------TEEEEECTTC
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCC--------------------------------------CeEEEEcCCC
Confidence 1 0 113567888874 4577765543 3477888889
Q ss_pred CEEEEEeCCCCC-----eeeceeEEEEEC-CEEEEecCCCCeEEEEe
Q 016318 349 KILQVLEDSKGK-----VVKAISEVEEKD-GKLWMGSVLMPFVAVYD 389 (391)
Q Consensus 349 ~~~~~~~~~~g~-----~~~~is~~~~~~-g~Lylgs~~~~~i~~~~ 389 (391)
+++..+.=..|. .+.....++.+. |+||+.|=. +.+-|++
T Consensus 205 ~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~ 250 (255)
T 3qqz_A 205 EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFT 250 (255)
T ss_dssp CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEE
T ss_pred CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEE
Confidence 866555433332 233445665544 889998655 4666654
No 116
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.92 E-value=2.4e-07 Score=87.49 Aligned_cols=195 Identities=11% Similarity=0.028 Sum_probs=110.0
Q ss_pred cceEEEccCCCeeEEEec------CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 71 PESMAFDPLGRGPYTGVA------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
-.++++.|||+.+.+++. |+.|..++....... ...|. ...........++|++ ++.
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~-------~~~~~---------~~~~~~~~V~~~~~s~-d~~ 107 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN-------ESLCT---------AGVQTEAGVTDVAWVS-EKG 107 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C-------GGGCS---------EEEECSSCEEEEEEET-TTE
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc-------eeEec---------ccCCCCCCEEEEEEcC-CCC
Confidence 468999999998888876 667777754310000 00010 0001123367899998 788
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
++++...+.|..+|..+++............-..++.+++.++|+..++.+. ++.|..||.++
T Consensus 108 ~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~-----------------dg~v~iwd~~~ 170 (357)
T 4g56_B 108 ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK-----------------DFSVKVWDLSQ 170 (357)
T ss_dssp EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTT
T ss_pred EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC-----------------CCeEEEEECCC
Confidence 8888765557777877664322111000011235678999999987777543 57899999988
Q ss_pred CeEEEeccC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCC-CEEEEEcC
Q 016318 225 KQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKG-EFWVAIHC 299 (391)
Q Consensus 225 ~~~~~~~~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G-~lwva~~~ 299 (391)
++....... -...+.++++++++.++++....+.|..+++...+......+......+..+++.+++ +++++...
T Consensus 171 ~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 171 KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 876554433 3456789999988656666566677887776532211111111122345567787765 45544333
No 117
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.92 E-value=2e-06 Score=80.00 Aligned_cols=198 Identities=9% Similarity=0.124 Sum_probs=119.3
Q ss_pred ccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE-E
Q 016318 68 IQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-Y 146 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L-~ 146 (391)
-....+++++++|+.++++..+|.|..|+........... ...+...++++++ ++++ +
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~~l~ 90 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD--------------------GHTGTIWSIDVDC-FTKYCV 90 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC--------------------CCSSCEEEEEECT-TSSEEE
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh--------------------hcCCcEEEEEEcC-CCCEEE
Confidence 3456789999999999999999999999876222222111 1134567889998 5554 4
Q ss_pred EEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
.+.....|..+|..+++...... . ...+..+++.++|+..++.... .....|.+..||..++.
T Consensus 91 s~~~dg~i~iwd~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~~~~~------------~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 91 TGSADYSIKLWDVSNGQCVATWK-S----PVPVKRVEFSPCGNYFLAILDN------------VMKNPGSINIYEIERDS 153 (369)
T ss_dssp EEETTTEEEEEETTTCCEEEEEE-C----SSCEEEEEECTTSSEEEEEECC------------BTTBCCEEEEEEEEECT
T ss_pred EEeCCCeEEEEECCCCcEEEEee-c----CCCeEEEEEccCCCEEEEecCC------------ccCCCCEEEEEEecCCc
Confidence 44444448889988776544332 1 1246788999999876665321 00112566666654331
Q ss_pred ------------EEEec--cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC
Q 016318 227 ------------TTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE 292 (391)
Q Consensus 227 ------------~~~~~--~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~ 292 (391)
...+. ........++++++++.++++ ...+.|..+++.... .....+....+....++++++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG-HKDGKISKYDVSNNY-EYVDSIDLHEKSISDMQFSPDLT 231 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE-ETTSEEEEEETTTTT-EEEEEEECCSSCEEEEEECTTSS
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE-cCCCEEEEEECCCCc-EeEEEEecCCCceeEEEECCCCC
Confidence 11111 111256789999999977666 456789999865411 11122222233456788999998
Q ss_pred EEEEEcCCCchhh
Q 016318 293 FWVAIHCRRSLYS 305 (391)
Q Consensus 293 lwva~~~~~~~~~ 305 (391)
+.++......+..
T Consensus 232 ~l~~~~~d~~i~v 244 (369)
T 3zwl_B 232 YFITSSRDTNSFL 244 (369)
T ss_dssp EEEEEETTSEEEE
T ss_pred EEEEecCCceEEE
Confidence 6666554444433
No 118
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.91 E-value=5e-07 Score=87.21 Aligned_cols=179 Identities=12% Similarity=0.055 Sum_probs=116.5
Q ss_pred CcceEEEccCCCeeEEEecCC---EEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 70 GPESMAFDPLGRGPYTGVADG---RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g---~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
...++++.|+|+.++++..++ .|+.++.. +...+.. ..+....+++++ +|+
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~-----------------------~~~~~~~~~~sp-dg~ 235 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-----------------------FPRHNGAPAFSP-DGS 235 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-----------------------CSSCEEEEEECT-TSS
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec-----------------------CCCcccCEEEcC-CCC
Confidence 456788999999777777664 88888876 2222210 123456789998 555
Q ss_pred -EEEEECCC---CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 145 -LYIADAYF---GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 145 -L~V~d~~~---gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
|+++.... .|+.+|..+++.+.+.... .....+++.+||+ |+++... .+...|+.
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~-----~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~ 295 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQIRQVTDGR-----SNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYK 295 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEEECCCCS-----SCEEEEEECTTSSEEEEEECT---------------TSSCEEEE
T ss_pred EEEEEEecCCCceEEEEECCCCCEEeCcCCC-----CcccceEECCCCCEEEEEECC---------------CCCcEEEE
Confidence 65454332 3999999988776553221 2456788999997 5555421 12337999
Q ss_pred EeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCC--CCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEE
Q 016318 220 YDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS--VGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 220 ~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~--~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva 296 (391)
+|..+++.+.+.........++++|||++|+++... ...|+.+++++. +...+... .....++++++|+..+.
T Consensus 296 ~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~---~~~~l~~~-~~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 296 VNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG---GVQVLSST-FLDETPSLAPNGTMVIY 370 (415)
T ss_dssp EETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC---CEEECCCS-SSCEEEEECTTSSEEEE
T ss_pred EECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC---CEEEecCC-CCcCCeEEcCCCCEEEE
Confidence 999988876665444456689999999988877543 357888887652 22222221 24567889999984443
No 119
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.91 E-value=1.4e-07 Score=89.49 Aligned_cols=72 Identities=13% Similarity=0.210 Sum_probs=52.3
Q ss_pred ceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc---cCCCCCceEeCCCC
Q 016318 215 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI---LPGYPDNVRTNEKG 291 (391)
Q Consensus 215 g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~---~~g~p~~i~~d~~G 291 (391)
+.|..+|.++++...-..... |.+|+++|||++||++.. +.|..++.+. +..+.... ....|.+++++++|
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t---~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQ---PEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSS---SSCEEEEEETTSCSSEEEEEECCCS
T ss_pred ceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCC---CcceeeEEeccCCCCcEEEEecCCC
Confidence 468889998887655444334 999999999999998864 8899998653 32233332 23478999999998
Q ss_pred C
Q 016318 292 E 292 (391)
Q Consensus 292 ~ 292 (391)
+
T Consensus 360 ~ 360 (361)
T 2oiz_A 360 G 360 (361)
T ss_dssp C
T ss_pred C
Confidence 5
No 120
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.89 E-value=3.7e-07 Score=87.88 Aligned_cols=260 Identities=10% Similarity=0.008 Sum_probs=146.6
Q ss_pred cCCCeeEEE-ecCCEEEEEeCC----ceeEEEeecCCCcccCCCCCCccccccccC-ccCccceEEEecCCCcEEEEECC
Q 016318 78 PLGRGPYTG-VADGRILFWDGL----KWTDFAFTSNNRSELCNPKPIATSYLKNEH-ICGRPLGLRFDKKTGDLYIADAY 151 (391)
Q Consensus 78 ~~G~~ly~~-~~~g~I~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~P~gi~~d~~~g~L~V~d~~ 151 (391)
.+++.+|+. ...++|+.+|.. +.+.....-+ |+ ..+. ...+|+++.+.+ +| +||+..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~-----~~---------~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g 156 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEP-----EE---------VKKVSGYSRLHTVHCGP-DA-IYISALG 156 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECH-----HH---------HHHHHCEEEEEEEEECS-SC-EEEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeech-----hh---------cccccCCCcccceeECC-Ce-EEEEcCC
Confidence 567767764 456889999864 2222211100 00 0001 134899999998 67 9997554
Q ss_pred C-------CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeC-CCcccch-hheeeecccCCCceEEEEeC
Q 016318 152 F-------GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDS-STNYQRR-NFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 152 ~-------gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~-~~~~~~~-~~~~~~~~~~~~g~l~~~d~ 222 (391)
. ++..+|.+|.++..-... .+.+..+++++...+++++.++.. +.--... -+..+.++.....+|..||.
T Consensus 157 ~~~g~~~g~v~vlD~~T~~v~~~~~~-~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~ 235 (462)
T 2ece_A 157 NEEGEGPGGILMLDHYSFEPLGKWEI-DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL 235 (462)
T ss_dssp ETTSCSCCEEEEECTTTCCEEEECCS-BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred CcCCCCCCeEEEEECCCCeEEEEEcc-CCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence 3 599999998875543321 223345677888899988666652 2100011 01111111244678999999
Q ss_pred CCCeEEEeccC---CCCcceEEE--ccCCCEEEEEeC-----CCCeEEEEEeccccCccceee--c------cc------
Q 016318 223 TTKQTTVLLRN---LQFPNGLSL--SKDKSFFVFCEG-----SVGRLHKYWLIGEKAGNLEAF--A------IL------ 278 (391)
Q Consensus 223 ~~~~~~~~~~~---~~~~ngia~--~~d~~~l~v~et-----~~~~I~~~~~~g~~~g~~~~~--~------~~------ 278 (391)
++++...-..- ...|..|.+ +|++++.||+.. .++.|+++..++......+++ . .+
T Consensus 236 ~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 236 RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKP 315 (462)
T ss_dssp TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccc
Confidence 88765443322 146777766 999999999876 778888876653211111111 0 11
Q ss_pred ----CCCCCceEeCCCCC-EEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecC---ccceEEEEECCCCCE
Q 016318 279 ----PGYPDNVRTNEKGE-FWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGG---RLHAMAVKYSPEGKI 350 (391)
Q Consensus 279 ----~g~p~~i~~d~~G~-lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~v~~~d~~g~~ 350 (391)
++.|.+|.+++||+ +||+......+....+. .+...+++.+++........-...+ ...+.-++++++|+.
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~-d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS-NPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS-STTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec-CCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 25688999999998 88888776554332221 2333455555443210000000000 013456778999998
Q ss_pred EEEEe
Q 016318 351 LQVLE 355 (391)
Q Consensus 351 ~~~~~ 355 (391)
+++-+
T Consensus 395 LyVaN 399 (462)
T 2ece_A 395 VYVTN 399 (462)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88776
No 121
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.89 E-value=2.1e-06 Score=85.76 Aligned_cols=186 Identities=13% Similarity=0.119 Sum_probs=119.9
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE-EEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L-~V~ 148 (391)
...++++.++|+.+.++..++.|..|+.+. ..+.... .......++++.+ +++. ..+
T Consensus 223 ~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~-~~~~~~~--------------------~~~~~v~~v~~~~-d~~~l~~~ 280 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLT--------------------GHSSSVNGVAFRP-DGQTIASA 280 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTS-CEEEEEC--------------------CCSSCEEEEEECT-TSSEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeCCC-CEEEEEe--------------------cCCCCEEEEEEcC-CCCEEEEE
Confidence 456899999999889999999998887651 1111111 0124466889998 5554 445
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
.....+..++..+...+.+... ...+.++++.++|...++.+. ++.+..||..+.+..
T Consensus 281 ~~d~~i~~w~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~t~~~-----------------d~~i~~w~~~~~~~~ 338 (577)
T 2ymu_A 281 SDDKTVKLWNRNGQLLQTLTGH-----SSSVWGVAFSPDGQTIASASD-----------------DKTVKLWNRNGQHLQ 338 (577)
T ss_dssp ETTSCEEEEETTSCEEEEECCC-----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTSCEEE
T ss_pred eCCCEEEEEeCCCcEEEEEecC-----CCCeEEEEECCCCCEEEEEeC-----------------CCeEEEEeCCCCeeE
Confidence 4444577788766544443221 124678899999987776543 467888898877777
Q ss_pred EeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCch
Q 016318 229 VLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 229 ~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
.+........+++++||++.+..+ ...+.|..++..+. ....+....+....++++++|++.++....+.+
T Consensus 339 ~~~~~~~~v~~~~~s~~g~~l~~~-~~dg~v~~~~~~~~---~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v 409 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 409 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTCC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred EEeCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEcCCCC---EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEE
Confidence 665545567789999999976655 45567777765432 122222223345678899999866655444443
No 122
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.88 E-value=3.2e-06 Score=77.56 Aligned_cols=193 Identities=15% Similarity=0.076 Sum_probs=120.7
Q ss_pred ccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 68 IQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
-..-.+++++++|+.+.++..+|.|..|+........... ........+++++ ++++++
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~~l~ 81 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------------------GHKLGISDVAWSS-DSNLLV 81 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------------------CCSSCEEEEEECT-TSSEEE
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc--------------------cCCCceEEEEEcC-CCCEEE
Confidence 3456789999999989999999999999875211111110 1123456889998 566544
Q ss_pred -EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 148 -ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 148 -~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
+.....|..+|.++++........ ......+++.+++++.++.+. ++.+..||..+++
T Consensus 82 s~~~d~~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~ 140 (312)
T 4ery_A 82 SASDDKTLKIWDVSSGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSF-----------------DESVRIWDVKTGK 140 (312)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTCC
T ss_pred EECCCCEEEEEECCCCcEEEEEcCC----CCCEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCE
Confidence 444444888898877543322211 124677888999987777643 5789999998776
Q ss_pred EEEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc-cCCCCCceEeCCCCCEEEEEcCCCchh
Q 016318 227 TTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEKGEFWVAIHCRRSLY 304 (391)
Q Consensus 227 ~~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~~G~lwva~~~~~~~~ 304 (391)
...... .......++++++++.++.+ ...+.|..+++...+ ....+.. .......++++++|++.++......+.
T Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 217 (312)
T 4ery_A 141 CLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 217 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCC--EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEE
T ss_pred EEEEecCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCc--eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 544332 33456789999999966555 556788888865321 1112211 111234578899998776655544443
Q ss_pred h
Q 016318 305 S 305 (391)
Q Consensus 305 ~ 305 (391)
.
T Consensus 218 i 218 (312)
T 4ery_A 218 L 218 (312)
T ss_dssp E
T ss_pred E
Confidence 3
No 123
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.88 E-value=1.3e-08 Score=96.36 Aligned_cols=159 Identities=15% Similarity=0.122 Sum_probs=101.8
Q ss_pred cCccceEEEecCCCc-EEEEECCCCeEEEeCCCCeeEEceec--cCCCcccCCcceeecC----CCCEEEEeCCCcccch
Q 016318 130 CGRPLGLRFDKKTGD-LYIADAYFGLMKVGPEGGLATSLATE--AEGVPLRFTNDLDIDD----EGNVYFTDSSTNYQRR 202 (391)
Q Consensus 130 ~g~P~gi~~d~~~g~-L~V~d~~~gl~~~d~~~g~~~~~~~~--~~~~~~~~~~~l~~d~----~G~ly~td~~~~~~~~ 202 (391)
...|.+|++++ +|+ |||++....|+++++++...+.+... ........+.+|++++ +|.||++.+...
T Consensus 17 l~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~---- 91 (353)
T 2g8s_A 17 LDHPWALAFLP-DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVG---- 91 (353)
T ss_dssp ESSEEEEEECS-TTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEEC----
T ss_pred CCCcEEEEEcC-CCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCC----
Confidence 56799999999 788 99999765699998764322222211 0001123578999998 589999974310
Q ss_pred hheeeecccCCCceEEEEeCCCC-----eEEEeccC-------CCCcceEEEccCCCEEEEEeCC-------------CC
Q 016318 203 NFMQLVFSAEDTGRVLKYDPTTK-----QTTVLLRN-------LQFPNGLSLSKDKSFFVFCEGS-------------VG 257 (391)
Q Consensus 203 ~~~~~~~~~~~~g~l~~~d~~~~-----~~~~~~~~-------~~~~ngia~~~d~~~l~v~et~-------------~~ 257 (391)
..+....+|.+++.+.+ ..+++... ...+++++++|||. ||++... .+
T Consensus 92 ------~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g 164 (353)
T 2g8s_A 92 ------DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQG 164 (353)
T ss_dssp ------SSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTT
T ss_pred ------CCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCe
Confidence 00001347888765432 23333322 34578999999995 9999532 35
Q ss_pred eEEEEEecccc-C---------ccceeecccCCCCCceEeCC-CCCEEEEEcCC
Q 016318 258 RLHKYWLIGEK-A---------GNLEAFAILPGYPDNVRTNE-KGEFWVAIHCR 300 (391)
Q Consensus 258 ~I~~~~~~g~~-~---------g~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~ 300 (391)
+|+|++.+|.. . ...++++.--..|.++++|+ +|++|++....
T Consensus 165 ~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 165 KLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp EEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS
T ss_pred EEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC
Confidence 89999987631 0 13455543112488999999 89999998764
No 124
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.88 E-value=1.5e-06 Score=82.11 Aligned_cols=203 Identities=13% Similarity=0.057 Sum_probs=129.8
Q ss_pred cCcceEEEccCC-CeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-
Q 016318 69 QGPESMAFDPLG-RGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD- 144 (391)
Q Consensus 69 ~gPe~i~~d~~G-~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~- 144 (391)
..-.+++++++| +.++++..+|.|..|+.. ....... .....+...++++++++++
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------~~~h~~~v~~~~~~~~~~~~ 133 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ--------------------GMGPGDAITGMKFNQFNTNQ 133 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC--------------------CCSTTCBEEEEEEETTEEEE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee--------------------cCCcCCceeEEEeCCCCCCE
Confidence 355688999999 889999999999999876 2211110 0012355678999873334
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
|+.+.....|..+|..+.....+..... ....+..+++.++|++.++.+. ++.+..||...
T Consensus 134 l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~ 194 (383)
T 3ei3_B 134 LFVSSIRGATTLRDFSGSVIQVFAKTDS--WDYWYCCVDVSVSRQMLATGDS-----------------TGRLLLLGLDG 194 (383)
T ss_dssp EEEEETTTEEEEEETTSCEEEEEECCCC--SSCCEEEEEEETTTTEEEEEET-----------------TSEEEEEETTS
T ss_pred EEEEeCCCEEEEEECCCCceEEEeccCC--CCCCeEEEEECCCCCEEEEECC-----------------CCCEEEEECCC
Confidence 4555444458888988766655532211 1235678899999987766533 57899999876
Q ss_pred CeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccC-ccceeecccCCCCCceEeCC-CCCEEEEEcCCCc
Q 016318 225 KQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA-GNLEAFAILPGYPDNVRTNE-KGEFWVAIHCRRS 302 (391)
Q Consensus 225 ~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~-g~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~ 302 (391)
.....+.......+.++++|+++.++++-...+.|..+++...+. +.........+....+++++ +|++.++......
T Consensus 195 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~ 274 (383)
T 3ei3_B 195 HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE 274 (383)
T ss_dssp CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE
T ss_pred CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc
Confidence 666666555567789999999984444445567888888764221 11111112334566789999 9987776655555
Q ss_pred hhhhhhhc
Q 016318 303 LYSHLMAL 310 (391)
Q Consensus 303 ~~~~~l~~ 310 (391)
+.++.+..
T Consensus 275 i~iwd~~~ 282 (383)
T 3ei3_B 275 IRVYSSYD 282 (383)
T ss_dssp EEEEETTB
T ss_pred EEEEECCC
Confidence 54443433
No 125
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.88 E-value=2.4e-07 Score=82.97 Aligned_cols=171 Identities=13% Similarity=0.033 Sum_probs=109.5
Q ss_pred ceEEEccCCCeeEEEecC-C--EEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCcc--ceEEEecCCCcEE
Q 016318 72 ESMAFDPLGRGPYTGVAD-G--RILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRP--LGLRFDKKTGDLY 146 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~-g--~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P--~gi~~d~~~g~L~ 146 (391)
+++.++ +|. +|.++.+ | .|.++|.+.-+...... ...++ .|++++ +++||
T Consensus 46 qGL~~~-~~~-LyestG~~g~S~v~~vD~~Tgkv~~~~~---------------------l~~~~FgeGit~~--g~~ly 100 (262)
T 3nol_A 46 EGFFYR-NGY-FYESTGLNGRSSIRKVDIESGKTLQQIE---------------------LGKRYFGEGISDW--KDKIV 100 (262)
T ss_dssp EEEEEE-TTE-EEEEEEETTEEEEEEECTTTCCEEEEEE---------------------CCTTCCEEEEEEE--TTEEE
T ss_pred ceEEEE-CCE-EEEECCCCCCceEEEEECCCCcEEEEEe---------------------cCCccceeEEEEe--CCEEE
Confidence 788898 665 8877654 3 89999887322222211 01234 456776 57999
Q ss_pred EEECCCC-eEEEeCCCCeeE-EceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 147 IADAYFG-LMKVGPEGGLAT-SLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 147 V~d~~~g-l~~~d~~~g~~~-~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
++++..+ ++++|+++.+.. .+... + ...+++.| .+.+|+++. +++|..+|+++
T Consensus 101 ~ltw~~~~v~v~D~~t~~~~~ti~~~--~----eG~glt~d-g~~L~~SdG------------------s~~i~~iDp~T 155 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLRQVRSFNYD--G----EGWGLTHN-DQYLIMSDG------------------TPVLRFLDPES 155 (262)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECS--S----CCCCEEEC-SSCEEECCS------------------SSEEEEECTTT
T ss_pred EEEeeCCEEEEEECccCcEEEEEECC--C----CceEEecC-CCEEEEECC------------------CCeEEEEcCCC
Confidence 9998766 999999887543 22211 1 22345543 347999883 36899999998
Q ss_pred CeEEEec------cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccC-------------CCCCce
Q 016318 225 KQTTVLL------RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP-------------GYPDNV 285 (391)
Q Consensus 225 ~~~~~~~------~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~-------------g~p~~i 285 (391)
.+...-. ..+..+|.+.+. +|+ ||++....+.|.+++.+. ++..-..+++ ..|+||
T Consensus 156 ~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~t---G~V~~~Id~~~L~~~~~~~~~~~~vlNGI 230 (262)
T 3nol_A 156 LTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPET---GKVTGIIDLNGILAEAGPLPSPIDVLNGI 230 (262)
T ss_dssp CSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTT---CBEEEEEECTTGGGGSCSCCSSCCCEEEE
T ss_pred CeEEEEEEeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCC---CcEEEEEECCcCccccccccCcCCceEEE
Confidence 7654322 123456777765 675 999988889999998543 3332222221 246889
Q ss_pred EeCCCCC-EEEEE
Q 016318 286 RTNEKGE-FWVAI 297 (391)
Q Consensus 286 ~~d~~G~-lwva~ 297 (391)
+.|++++ +||+.
T Consensus 231 A~dp~~~~lfVTG 243 (262)
T 3nol_A 231 AWDKEHHRLFVTG 243 (262)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEC
Confidence 9998765 88864
No 126
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.88 E-value=2.2e-06 Score=85.49 Aligned_cols=187 Identities=12% Similarity=0.119 Sum_probs=118.3
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
...++++.++|+.+.++..++.|..|+..... +.... .....+.++++++ +++.++..
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-~~~~~--------------------~~~~~v~~~~~s~-~g~~l~~~ 362 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQH-LQTLT--------------------GHSSSVWGVAFSP-DGQTIASA 362 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCE-EEEEC--------------------CCSSCEEEEEECT-TSSEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-eEEEe--------------------CCCCCEEEEEECC-CCCEEEEE
Confidence 44678999999988999999999888866211 11110 0124467889998 56554443
Q ss_pred CCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 150 AYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 150 ~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
...| +..++..+..+..+... ...+..++++++|+..++.+. ++.|..||.......
T Consensus 363 ~~dg~v~~~~~~~~~~~~~~~~-----~~~v~~~~~s~dg~~l~~~~~-----------------d~~v~~~~~~~~~~~ 420 (577)
T 2ymu_A 363 SDDKTVKLWNRNGQLLQTLTGH-----SSSVRGVAFSPDGQTIASASD-----------------DKTVKLWNRNGQLLQ 420 (577)
T ss_dssp ETTSEEEEEETTCCEEEEEECC-----SSCEEEEEECTTSSCEEEEET-----------------TSEEEEECTTCCEEE
T ss_pred eCCCEEEEEcCCCCEEEEecCC-----CCCeEEEEECCCCCEEEEEeC-----------------CCEEEEEeCCCCEEE
Confidence 3444 77777665544444221 124678999999986666532 467888887655555
Q ss_pred EeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCchh
Q 016318 229 VLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLY 304 (391)
Q Consensus 229 ~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~ 304 (391)
.+...-....+++++||++.+..+ ...+.|..++..+. ....+....+....++++++|.+.++......+.
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~ 492 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTIASA-SDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 492 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSC---EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred EecCCCCCeEEEEECCCCCEEEEE-cCCCEEEEEECCCC---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 554444566789999999966655 45667877775442 1222222223446788999999777655554443
No 127
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.86 E-value=2.7e-07 Score=82.63 Aligned_cols=156 Identities=16% Similarity=0.174 Sum_probs=96.7
Q ss_pred ceEEEecCCCcEEEEECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccC
Q 016318 134 LGLRFDKKTGDLYIADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAE 212 (391)
Q Consensus 134 ~gi~~d~~~g~L~V~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~ 212 (391)
.|+.++ ++.||+++...| |.++|++++++..-. .+. ..+..+++++. ++||+++..
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~--~~FgeGit~~g-~~Ly~ltw~---------------- 114 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME--RLG--NIFAEGLASDG-ERLYQLTWT---------------- 114 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE--ECT--TCCEEEEEECS-SCEEEEESS----------------
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC--CcceeEEEEeC-CEEEEEEcc----------------
Confidence 589997 589999998765 899999998764432 222 23556677763 499999854
Q ss_pred CCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccC-ccceeecc-cC-CCCCceEeCC
Q 016318 213 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA-GNLEAFAI-LP-GYPDNVRTNE 289 (391)
Q Consensus 213 ~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~-g~~~~~~~-~~-g~p~~i~~d~ 289 (391)
++.++.||+++.+...-..-. +.|..+++|++.||+++ .+++|+.++.+..+. .+.++-.+ .+ ..++.+...
T Consensus 115 -~~~v~V~D~~Tl~~~~ti~~~--~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~- 189 (268)
T 3nok_A 115 -EGLLFTWSGMPPQRERTTRYS--GEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA- 189 (268)
T ss_dssp -SCEEEEEETTTTEEEEEEECS--SCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred -CCEEEEEECCcCcEEEEEeCC--CceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-
Confidence 579999999988765433322 33444557888899997 588999998543211 11111111 00 123345554
Q ss_pred CCCEEEEEcCCCchhhhhhhcCccceeeeeec
Q 016318 290 KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKL 321 (391)
Q Consensus 290 ~G~lwva~~~~~~~~~~~l~~~~~~~~~~~~l 321 (391)
+|.+|++......+ +...|..++++..+
T Consensus 190 dG~lyanvw~s~~I----~vIDp~TG~V~~~I 217 (268)
T 3nok_A 190 NGVIYANIWHSSDV----LEIDPATGTVVGVI 217 (268)
T ss_dssp TTEEEEEETTCSEE----EEECTTTCBEEEEE
T ss_pred CCEEEEEECCCCeE----EEEeCCCCcEEEEE
Confidence 78999887654322 22344444444444
No 128
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.86 E-value=1e-07 Score=92.23 Aligned_cols=209 Identities=11% Similarity=0.015 Sum_probs=122.0
Q ss_pred cCcceEEEccCCCeeEEEec----------CCEEEEEeCCceeEEEeec-CCCcccCCCCCCccccccccCccCccceEE
Q 016318 69 QGPESMAFDPLGRGPYTGVA----------DGRILFWDGLKWTDFAFTS-NNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~----------~g~I~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~ 137 (391)
..| +|++++||+.+|++.. ++.|..+|....+...... ... ........|.+++
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~--------------~r~~~g~~P~~~~ 183 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDA--------------PRFLVGTYQWMNA 183 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC--------------CCCCBSCCGGGSE
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCc--------------cccccCCCcceEE
Confidence 368 9999999999999873 5679999887333332210 000 0001235799999
Q ss_pred EecCCCcEEEEECC--CCeEEEeCCCCeeEEceeccCCCcccCCcc----eeecCCCCEEEEeCCCc-cc--------ch
Q 016318 138 FDKKTGDLYIADAY--FGLMKVGPEGGLATSLATEAEGVPLRFTND----LDIDDEGNVYFTDSSTN-YQ--------RR 202 (391)
Q Consensus 138 ~d~~~g~L~V~d~~--~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~----l~~d~~G~ly~td~~~~-~~--------~~ 202 (391)
++++++.|||++.. +.|.++|..++++..-.. ..+.....|.+ ++..++|++.+.+.... .. ..
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~-v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~ 262 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD-VPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE 262 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE-cCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence 99966689999864 449999999886543211 11111122333 56677887555543211 00 00
Q ss_pred h-hee----------eecccCCCceEEEEeCCCCeEEEecc----------CCCCcce---EEEccCCCEEEEEeCC---
Q 016318 203 N-FMQ----------LVFSAEDTGRVLKYDPTTKQTTVLLR----------NLQFPNG---LSLSKDKSFFVFCEGS--- 255 (391)
Q Consensus 203 ~-~~~----------~~~~~~~~g~l~~~d~~~~~~~~~~~----------~~~~~ng---ia~~~d~~~l~v~et~--- 255 (391)
. -+. .++-....++++.+|..+++..+... ....|.| +++++|++.+||+...
T Consensus 263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~ 342 (426)
T 3c75_H 263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE 342 (426)
T ss_dssp TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence 0 000 00000123567777776555443211 0012444 8999999999998641
Q ss_pred ------CCeEEEEEeccccCccceeecc--cCCCCCceEeCCCCC-EEEEEc
Q 016318 256 ------VGRLHKYWLIGEKAGNLEAFAI--LPGYPDNVRTNEKGE-FWVAIH 298 (391)
Q Consensus 256 ------~~~I~~~~~~g~~~g~~~~~~~--~~g~p~~i~~d~~G~-lwva~~ 298 (391)
.+.|+.++.+. .++... +++.|.+|.++++|+ +|+..+
T Consensus 343 gthk~~s~~VsVID~~T-----~kvv~~I~vg~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 343 WKHKAASRFVVVLNAET-----GERINKIELGHEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp TCTTSCEEEEEEEETTT-----CCEEEEEEEEEEECEEEECCSSSCEEEEEE
T ss_pred ccccCCCCEEEEEECCC-----CeEEEEEECCCCcCeEEEccCCCEEEEEEc
Confidence 35799998543 233333 345699999999998 665555
No 129
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.85 E-value=3e-06 Score=79.16 Aligned_cols=192 Identities=7% Similarity=-0.021 Sum_probs=116.2
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LY 146 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~ 146 (391)
.-.+++++++|+.++++..++.|..|+.. .+....... ...+...++++++ +++ |+
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~~l~ 68 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK--------------------EHNGQVTGVDWAP-DSNRIV 68 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE--------------------CCSSCEEEEEEET-TTTEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec--------------------CCCCcccEEEEeC-CCCEEE
Confidence 45688999999988899899999999765 222222211 1134567899998 555 55
Q ss_pred EEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
++.....|..+|..+++......... ....+..+++.++|+..++.+. ++.+..||..+++
T Consensus 69 ~~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-----------------d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 69 TCGTDRNAYVWTLKGRTWKPTLVILR--INRAARCVRWAPNEKKFAVGSG-----------------SRVISICYFEQEN 129 (372)
T ss_dssp EEETTSCEEEEEEETTEEEEEEECCC--CSSCEEEEEECTTSSEEEEEET-----------------TSSEEEEEEETTT
T ss_pred EEcCCCeEEEEECCCCeeeeeEEeec--CCCceeEEEECCCCCEEEEEeC-----------------CCEEEEEEecCCC
Confidence 55544558888887775433221111 1235678899999976666533 4667777765554
Q ss_pred ----EEEeccC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEecccc---------------Ccc-ceeecccCCCCCce
Q 016318 227 ----TTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK---------------AGN-LEAFAILPGYPDNV 285 (391)
Q Consensus 227 ----~~~~~~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~---------------~g~-~~~~~~~~g~p~~i 285 (391)
....... ......++++|+++.++.+ ...+.|..+++.... .++ ...+....+....+
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 208 (372)
T 1k8k_C 130 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG-SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV 208 (372)
T ss_dssp TEEEEEEECTTCCSCEEEEEECTTSSEEEEE-ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE
T ss_pred cceeeeeeecccCCCeeEEEEcCCCCEEEEE-cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEE
Confidence 2233222 3456789999999966655 456778888754210 011 11121122345678
Q ss_pred EeCCCCCEEEEEcCCCc
Q 016318 286 RTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 286 ~~d~~G~lwva~~~~~~ 302 (391)
+++++|++.++......
T Consensus 209 ~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 209 CFSANGSRVAWVSHDST 225 (372)
T ss_dssp EECSSSSEEEEEETTTE
T ss_pred EECCCCCEEEEEeCCCE
Confidence 88899986665544433
No 130
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.85 E-value=2e-06 Score=80.34 Aligned_cols=188 Identities=11% Similarity=0.015 Sum_probs=121.6
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCCc----eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGLK----WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
..++++.++|+.+.++..++.|..|+... ....... ....+....+.+.+ ++.++
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~--------------------~~h~~~v~~~~~~~-~~~l~ 158 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL--------------------AGHTGYLSCCRFLD-DNQIV 158 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEE--------------------ECCSSCEEEEEEEE-TTEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEe--------------------cCCCccEEEEEECC-CCcEE
Confidence 45788999999899999999999887651 1111111 01124456677877 67777
Q ss_pred EEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
.+.....|..+|..+++......... .....+++.++|+++++.+. ++.+..||..+++
T Consensus 159 s~s~d~~i~~wd~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~sg~~-----------------d~~v~~wd~~~~~ 217 (340)
T 1got_B 159 TSSGDTTCALWDIETGQQTTTFTGHT----GDVMSLSLAPDTRLFVSGAC-----------------DASAKLWDVREGM 217 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCS----SCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCS
T ss_pred EEECCCcEEEEECCCCcEEEEEcCCC----CceEEEEECCCCCEEEEEeC-----------------CCcEEEEECCCCe
Confidence 77666668899998876443222111 24678899999998887643 5789999988776
Q ss_pred EEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc--cCCCCCceEeCCCCCEEEEEcCCCch
Q 016318 227 TTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--LPGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 227 ~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~--~~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
..... ......+.++++|+++.+..+ ...+.|..+++.... ....+.. .......++++++|++.++......+
T Consensus 218 ~~~~~~~h~~~v~~v~~~p~~~~l~s~-s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i 294 (340)
T 1got_B 218 CRQTFTGHESDINAICFFPNGNAFATG-SDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eEEEEcCCcCCEEEEEEcCCCCEEEEE-cCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCCCeE
Confidence 54433 333467899999999966554 556788888765321 1112211 11123567889999977766554443
No 131
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.82 E-value=5.9e-07 Score=86.45 Aligned_cols=196 Identities=11% Similarity=0.053 Sum_probs=116.6
Q ss_pred ccCcceEEEccCCCeeEEEecC------CEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC
Q 016318 68 IQGPESMAFDPLGRGPYTGVAD------GRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~~------g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~ 141 (391)
...|..+...++| ++.+...+ |+|..+|....+........ ....+.+..+.+.++
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~-----------------~~~~~~~Yd~~~~p~ 198 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID-----------------RGDQYLAYDFWWNLP 198 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB-----------------CTTCCCCCCEEEETT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC-----------------CCCccccceEEECCC
Confidence 4589999999999 55555554 78999998744444332100 001233456777884
Q ss_pred CCcEEEEEC-------------------CCCeEEEeCCCCeeEEceeccCCCcccCCcceee--cCCC-CEEEEeCCCcc
Q 016318 142 TGDLYIADA-------------------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDI--DDEG-NVYFTDSSTNY 199 (391)
Q Consensus 142 ~g~L~V~d~-------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~--d~~G-~ly~td~~~~~ 199 (391)
.+.++++++ ...|..+|.+++++..-... +.....|.+|.+ +++| ..|++..-+
T Consensus 199 ~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v--g~~g~~P~~i~f~~~Pdg~~aYV~~e~~-- 274 (462)
T 2ece_A 199 NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL--GEENRMALELRPLHDPTKLMGFINMVVS-- 274 (462)
T ss_dssp TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES--CTTEEEEEEEEECSSTTCCEEEEEEEEE--
T ss_pred CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec--CCCCCccceeEeeECCCCCEEEEEEeee--
Confidence 444566553 24499999987754322111 112235777755 8888 577776300
Q ss_pred cchhheeeecccCCCceEEEEeCCCCeEEEec-----c-----C-----------CCCcceEEEccCCCEEEEEeCCCCe
Q 016318 200 QRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL-----R-----N-----------LQFPNGLSLSKDKSFFVFCEGSVGR 258 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-----~-----~-----------~~~~ngia~~~d~~~l~v~et~~~~ 258 (391)
...-++.|++|..+.++.+... . . ...|.+|.+++||++|||+....+.
T Consensus 275 ----------~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~ 344 (462)
T 2ece_A 275 ----------LKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE 344 (462)
T ss_dssp ----------TTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE
T ss_pred ----------ccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE
Confidence 0001244543332234322111 0 0 2457899999999999999999999
Q ss_pred EEEEEeccccCccceeecc-----------------cCCCCCceEeCCCCC-EEEEE
Q 016318 259 LHKYWLIGEKAGNLEAFAI-----------------LPGYPDNVRTNEKGE-FWVAI 297 (391)
Q Consensus 259 I~~~~~~g~~~g~~~~~~~-----------------~~g~p~~i~~d~~G~-lwva~ 297 (391)
|..|++..+.. .+.... ++|.|.++.++++|+ +||+.
T Consensus 345 VavfdV~d~~~--~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 345 VRQYDISNPFK--PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEECSSTTS--CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEecCCCC--cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999864321 221111 224699999999998 66664
No 132
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.79 E-value=4.8e-07 Score=89.95 Aligned_cols=266 Identities=13% Similarity=0.065 Sum_probs=154.1
Q ss_pred eccccccCcceEEEc--cCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEE-
Q 016318 63 KFLNQIQGPESMAFD--PLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF- 138 (391)
Q Consensus 63 ~~~~~~~gPe~i~~d--~~G~~ly~~~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~- 138 (391)
+.-|+...|.--..| +||+.+|+... +++|.+++.+..+..... ..+....|+|+++
T Consensus 82 ~~~gd~hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii-------------------~ip~g~~phg~~~~ 142 (595)
T 1fwx_A 82 HDNGDLHHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAIL-------------------EIPNAKGIHGLRPQ 142 (595)
T ss_dssp CCCCCBCCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEE-------------------ECSSCCSEEEEEEC
T ss_pred cccCCCCccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEE-------------------eCCCCCCCcceeee
Confidence 334555555433322 27888888665 578999999843322211 0011356999998
Q ss_pred e-cCCCcEEEEE-----------------CCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCc
Q 016318 139 D-KKTGDLYIAD-----------------AYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTN 198 (391)
Q Consensus 139 d-~~~g~L~V~d-----------------~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~ 198 (391)
. ++.+.+|+++ .+.+ +..+|.++.++.--.. ..+ .|.+++++++|. +|++...+.
T Consensus 143 ~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~-Vgg----~pd~~~~spdGk~~~vt~~~se 217 (595)
T 1fwx_A 143 KWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL-VSG----NLDNCDADYEGKWAFSTSYNSE 217 (595)
T ss_dssp CSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE-ESS----CCCCEEECSSSSEEEEEESCTT
T ss_pred ecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEE-eCC----CccceEECCCCCEEEEEecCcc
Confidence 3 6567788884 2223 7788988764332111 122 589999999985 666664331
Q ss_pred cc---------chhhee---------eecccC--CCceEEEEeCCC--CeE-EEeccCCCCcceEEEccCCCEEEEEeCC
Q 016318 199 YQ---------RRNFMQ---------LVFSAE--DTGRVLKYDPTT--KQT-TVLLRNLQFPNGLSLSKDKSFFVFCEGS 255 (391)
Q Consensus 199 ~~---------~~~~~~---------~~~~~~--~~g~l~~~d~~~--~~~-~~~~~~~~~~ngia~~~d~~~l~v~et~ 255 (391)
-. ..+++. .+-.++ --+++-.+|.++ ++. .........|.|+.++|||+++|+++..
T Consensus 218 ~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~ 297 (595)
T 1fwx_A 218 KGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL 297 (595)
T ss_dssp CCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT
T ss_pred cCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC
Confidence 10 001000 000000 014588899887 332 2223334689999999999999999999
Q ss_pred CCeEEEEEecccc------C-ccceeecccC--CCCCceEeCCCCCEEEEEcCCCchhhhhhhc----C--ccceeeeee
Q 016318 256 VGRLHKYWLIGEK------A-GNLEAFAILP--GYPDNVRTNEKGEFWVAIHCRRSLYSHLMAL----Y--PKIRHFLLK 320 (391)
Q Consensus 256 ~~~I~~~~~~g~~------~-g~~~~~~~~~--g~p~~i~~d~~G~lwva~~~~~~~~~~~l~~----~--~~~~~~~~~ 320 (391)
.++|..|+.+..+ . ....+..+.+ ..|..++++++|++|++..-...+..+.+.. + ....+.+.+
T Consensus 298 s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~k 377 (595)
T 1fwx_A 298 SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDK 377 (595)
T ss_dssp SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEE
T ss_pred CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEE
Confidence 9999999976321 0 1112333322 3699999999999999987765554433322 0 012456666
Q ss_pred cCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCC
Q 016318 321 LPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSK 358 (391)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~ 358 (391)
++.....-.... +.-..++++|+.+++.+..+
T Consensus 378 idV~yqpGh~~~------~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 378 LDVHYQPGHLKT------VMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp EECSSCEEEEEE------TTTTSTTCCSSEEEEEESCC
T ss_pred eeccccccccee------ccceEeCCCCCEEEEcCCCC
Confidence 665432110100 01123568899888887655
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.77 E-value=4.6e-06 Score=80.41 Aligned_cols=144 Identities=12% Similarity=0.095 Sum_probs=95.1
Q ss_pred CccceEEEecCCCcEEEEECCC---CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhhee
Q 016318 131 GRPLGLRFDKKTGDLYIADAYF---GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 131 g~P~gi~~d~~~g~L~V~d~~~---gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~ 206 (391)
....++++++++..|+.+.... .|+.+|.++++.+.+... . .....+++.+||+ |+++.+.
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~----~~~~~~~~spdg~~la~~~~~---------- 243 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-P----RHNGAPAFSPDGSKLAFALSK---------- 243 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-S----SCEEEEEECTTSSEEEEEECT----------
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-C----CcccCEEEcCCCCEEEEEEec----------
Confidence 4466889998444465555443 499999998877655322 1 2467889999997 6656532
Q ss_pred eecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCC--CeEEEEEeccccCccceeecccCCCCCc
Q 016318 207 LVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV--GRLHKYWLIGEKAGNLEAFAILPGYPDN 284 (391)
Q Consensus 207 ~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~--~~I~~~~~~g~~~g~~~~~~~~~g~p~~ 284 (391)
.++..|+.+|.++++...+.........++++|||+.|+++.... .+|+++++.+. +...+....+....
T Consensus 244 -----~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~---~~~~l~~~~~~~~~ 315 (415)
T 2hqs_A 244 -----TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG---APQRITWEGSQNQD 315 (415)
T ss_dssp -----TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CCEECCCSSSEEEE
T ss_pred -----CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC---CEEEEecCCCcccC
Confidence 123569999999988877665545667899999999888775433 37999987653 22222222233446
Q ss_pred eEeCCCCCEEEEE
Q 016318 285 VRTNEKGEFWVAI 297 (391)
Q Consensus 285 i~~d~~G~lwva~ 297 (391)
++++++|+..+..
T Consensus 316 ~~~spdG~~l~~~ 328 (415)
T 2hqs_A 316 ADVSSDGKFMVMV 328 (415)
T ss_dssp EEECTTSSEEEEE
T ss_pred eEECCCCCEEEEE
Confidence 7889999855443
No 134
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.77 E-value=1.7e-06 Score=82.39 Aligned_cols=209 Identities=11% Similarity=0.010 Sum_probs=115.4
Q ss_pred cCcceEEEccCCCeeEEEec----------CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVA----------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~----------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~ 138 (391)
.+| ++++++||+.+|++.. ++.|..+|....+......-. +. ........|.++++
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~------~~-------~~~~~g~~p~~~~~ 132 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELP------DA-------PRFDVGPYSWMNAN 132 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECC------Cc-------cccccCCCccceEE
Confidence 478 9999999999999863 467888988633332221100 00 00001246889999
Q ss_pred ecCCCcEEEEECC--CCeEEEeCCCCeeEEc-eeccCCCcccCCcc----eeecCCCCEEEEeCCCccc-ch--------
Q 016318 139 DKKTGDLYIADAY--FGLMKVGPEGGLATSL-ATEAEGVPLRFTND----LDIDDEGNVYFTDSSTNYQ-RR-------- 202 (391)
Q Consensus 139 d~~~g~L~V~d~~--~gl~~~d~~~g~~~~~-~~~~~~~~~~~~~~----l~~d~~G~ly~td~~~~~~-~~-------- 202 (391)
+++++.|||++.. ..|..+| +++++... .. ..+.....+.+ ++..++|.+.+.+...+.. ..
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA 210 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccC
Confidence 9966779999854 4599999 88865432 21 11110011111 3344566544443311000 00
Q ss_pred -hhee----------eecccCCCceEEEEeCCCCeEEEec----------cCCCCcce---EEEccCCCEEEEEeC----
Q 016318 203 -NFMQ----------LVFSAEDTGRVLKYDPTTKQTTVLL----------RNLQFPNG---LSLSKDKSFFVFCEG---- 254 (391)
Q Consensus 203 -~~~~----------~~~~~~~~g~l~~~d~~~~~~~~~~----------~~~~~~ng---ia~~~d~~~l~v~et---- 254 (391)
..+. .++-....+.++.+|..+++.++.. .....|.| +++++|++.+|++..
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~ 290 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA 290 (373)
T ss_pred CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence 0000 0000012346777777654332211 01113555 889999999999754
Q ss_pred -----CCCeEEEEEeccccCccceeec--ccCCCCCceEeCCCCC-EEEEEc
Q 016318 255 -----SVGRLHKYWLIGEKAGNLEAFA--ILPGYPDNVRTNEKGE-FWVAIH 298 (391)
Q Consensus 255 -----~~~~I~~~~~~g~~~g~~~~~~--~~~g~p~~i~~d~~G~-lwva~~ 298 (391)
..+.|++++.+.. ++.. ..++.|.+|+++++|+ +|++..
T Consensus 291 ~~~~~~~~~V~VID~~t~-----~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLVG-----QTSSQISLGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ccccCCCCeEEEEECCCC-----EEEEEEECCCCcCeEEECCCCCeEEEEEc
Confidence 2357999986532 2222 3456799999999998 666554
No 135
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.75 E-value=1.1e-06 Score=83.59 Aligned_cols=191 Identities=13% Similarity=0.023 Sum_probs=102.5
Q ss_pred cCcceEEEccCCCeeEEEec----------CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVA----------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~----------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~ 138 (391)
.+|. +++++||+.+|++.. ++.|..||....+......-. . + .......+|.++++
T Consensus 79 ~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~-----~--g------~r~~~g~~P~~~a~ 144 (386)
T 3sjl_D 79 FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELP-----D--A------PRFLVGTYPWMTSL 144 (386)
T ss_dssp SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET-----T--C------CCCCBSCCGGGEEE
T ss_pred CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECC-----C--c------cccccCCCCceEEE
Confidence 4686 999999999999863 467888988743333221100 0 0 00012357999999
Q ss_pred ecCCCcEEEEECC--CCeEEEeCCCCeeEEceeccCCCcccCCcc----eeecCCCCEEEEeCCCcccchhheeeecccC
Q 016318 139 DKKTGDLYIADAY--FGLMKVGPEGGLATSLATEAEGVPLRFTND----LDIDDEGNVYFTDSSTNYQRRNFMQLVFSAE 212 (391)
Q Consensus 139 d~~~g~L~V~d~~--~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~----l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~ 212 (391)
++++..|||++.. +.|..+|..++++..-.. ..+....+|.+ +++.+||.+.+.+..
T Consensus 145 spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~-v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~---------------- 207 (386)
T 3sjl_D 145 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD-VPDCYHIFPTAPDTFFMHCRDGSLAKVAFG---------------- 207 (386)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSEEEEEEEETTEEEEEETTSCEEEEECC----------------
T ss_pred cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE-CCCcceeecCCCceeEEECCCCCEEEEECC----------------
Confidence 9966679999863 459999999986543221 11111112322 244555554444321
Q ss_pred CCceEEEEeCCCCeEEEeccC--CCCcceEEE-ccCCCEEEEEeCCCCeEEEEEeccccC---ccceeecc-------cC
Q 016318 213 DTGRVLKYDPTTKQTTVLLRN--LQFPNGLSL-SKDKSFFVFCEGSVGRLHKYWLIGEKA---GNLEAFAI-------LP 279 (391)
Q Consensus 213 ~~g~l~~~d~~~~~~~~~~~~--~~~~ngia~-~~d~~~l~v~et~~~~I~~~~~~g~~~---g~~~~~~~-------~~ 279 (391)
..+++.. ..+ ...+. ....+..++ .++|+.+|++. .++++.++..+... ...++|.. .|
T Consensus 208 ~~g~v~~--~~~----~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p 279 (386)
T 3sjl_D 208 TEGTPEI--THT----EVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRP 279 (386)
T ss_dssp SSSCCEE--EEC----CCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEE
T ss_pred CCCeEEE--eec----ceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceeccccccccccccC
Confidence 1122211 000 01111 111122344 47887666654 57899999876432 12222221 12
Q ss_pred CCCCceEeCCCCC-EEEEEc
Q 016318 280 GYPDNVRTNEKGE-FWVAIH 298 (391)
Q Consensus 280 g~p~~i~~d~~G~-lwva~~ 298 (391)
+....+.++++++ +||++.
T Consensus 280 ~g~q~~a~~~~~~~lyV~~~ 299 (386)
T 3sjl_D 280 GGWQQVAYHRALDRIYLLVD 299 (386)
T ss_dssp CSSSCEEEETTTTEEEEEEE
T ss_pred CCcceeeECCCCCeEEEEec
Confidence 2233477887666 999875
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.74 E-value=3.6e-06 Score=75.45 Aligned_cols=183 Identities=11% Similarity=0.006 Sum_probs=112.8
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCc-eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLK-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
...+++++++|+.++++. ++.|+.++... ....... ..+....+..+++++++..|+++
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~-------------------~~~~~~~~~~~~~spdg~~l~~~ 102 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD-------------------TGFATICNNDHGISPDGALYAIS 102 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC-------------------CTTCCCBCSCCEECTTSSEEEEE
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec-------------------cccccccccceEECCCCCEEEEE
Confidence 567899999999666654 78899997653 2111100 00112445678999843345555
Q ss_pred EC----CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 149 DA----YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 149 d~----~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
.. ...|+.++..+++.+.+... .....+++.++|+ ++++... .+.-+|+.++..
T Consensus 103 ~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~ 161 (297)
T 2ojh_A 103 DKVEFGKSAIYLLPSTGGTPRLMTKN------LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDID 161 (297)
T ss_dssp ECTTTSSCEEEEEETTCCCCEECCSS------SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETT
T ss_pred EeCCCCcceEEEEECCCCceEEeecC------CCccceEECCCCCEEEEEECC---------------CCceEEEEEECC
Confidence 42 23489999887766554321 1256678899986 5545421 112368888888
Q ss_pred CCeEEEeccCCCCcceEEEccCCCEEEEEeC--CCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEE
Q 016318 224 TKQTTVLLRNLQFPNGLSLSKDKSFFVFCEG--SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 224 ~~~~~~~~~~~~~~ngia~~~d~~~l~v~et--~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva 296 (391)
+++...+.........++++||++.++++.. ...+||.++..+. ....+.........+.++++|+..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 162 SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEEEEEEECTTSSEEEE
T ss_pred CCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEEecCCcccCCeEECCCCCEEEE
Confidence 8887776655566788999999998877653 3456777765442 22233222223445788999985443
No 137
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.74 E-value=1.5e-06 Score=84.03 Aligned_cols=195 Identities=14% Similarity=0.146 Sum_probs=122.1
Q ss_pred cceEEEcc-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 71 PESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 71 Pe~i~~d~-~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
-.+|++.| +++++.+|+.||.|..|+.. ....+.. .....+...+|+|++.++++++
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~--------------------~~gH~~~V~~l~f~p~~~~~l~ 181 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIK--------------------GIGAGGSITGLKFNPLNTNQFY 181 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEEC--------------------CCSSSCCCCEEEECSSCTTEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEE--------------------ccCCCCCEEEEEEeCCCCCEEE
Confidence 35789997 56778899999999999765 1111111 1111345678999874566555
Q ss_pred EECCCC-eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 148 ADAYFG-LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 148 ~d~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
+....| |..+|.+++..+.+..... .......++++++|++.++.+. +|.|..||.+++.
T Consensus 182 s~s~D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~-----------------dg~i~~wd~~~~~ 242 (435)
T 4e54_B 182 ASSMEGTTRLQDFKGNILRVFASSDT--INIWFCSLDVSASSRMVVTGDN-----------------VGNVILLNMDGKE 242 (435)
T ss_dssp EECSSSCEEEEETTSCEEEEEECCSS--CSCCCCCEEEETTTTEEEEECS-----------------SSBEEEEESSSCB
T ss_pred EEeCCCEEEEeeccCCceeEEeccCC--CCccEEEEEECCCCCEEEEEeC-----------------CCcEeeeccCcce
Confidence 545544 8888998877665543211 1234567889999988777643 5789999987766
Q ss_pred EEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc---CCCCCceEeCCCCCEEEEEcCCCch
Q 016318 227 TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL---PGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 227 ~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~---~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
+..+...-...+.++++|+++.++++-...+.|..+++...+. ...+... .+....++++++|++.++......+
T Consensus 243 ~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~--~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i 320 (435)
T 4e54_B 243 LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG--KASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEI 320 (435)
T ss_dssp CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS--SSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCE
T ss_pred eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccc--cceEEEeeeccccccceeECCCCCeeEEEcCCCEE
Confidence 5444433345678999999876666655566777777653211 1111111 1223457788899877665555444
Q ss_pred hhh
Q 016318 304 YSH 306 (391)
Q Consensus 304 ~~~ 306 (391)
.++
T Consensus 321 ~iw 323 (435)
T 4e54_B 321 RVY 323 (435)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 138
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.73 E-value=3e-06 Score=78.60 Aligned_cols=186 Identities=13% Similarity=0.088 Sum_probs=120.8
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE-EE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YI 147 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L-~V 147 (391)
...++++.++|+.+.+++.+|.|..++.. .-..+... ........+++++ ++++ ..
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~---------------------~~~~~v~~~~~sp-dg~~las 181 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD---------------------TRGKFILSIAYSP-DGKYLAS 181 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE---------------------CSSSCEEEEEECT-TSSEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec---------------------CCCceEEEEEECC-CCCEEEE
Confidence 34578999999999999999999999876 21111111 1123456889998 5665 44
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
+....-|..+|..+++........ ....+.+++.++|++.++.+. ++.|..||..+++.
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~~h----~~~v~~l~~spd~~~l~s~s~-----------------dg~i~iwd~~~~~~ 240 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLEGH----AMPIRSLTFSPDSQLLVTASD-----------------DGYIKIYDVQHANL 240 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCC----SSCCCEEEECTTSCEEEEECT-----------------TSCEEEEETTTCCE
T ss_pred EcCCCeEEEEECCCCcEEEEEccc----CCceeEEEEcCCCCEEEEEcC-----------------CCeEEEEECCCcce
Confidence 444445888999887643322211 134688999999988777643 57899999887765
Q ss_pred EEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCC
Q 016318 228 TVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRR 301 (391)
Q Consensus 228 ~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~ 301 (391)
.... ........++++|+++.++.+ ...+.|..+++... .....+....+....++++++|+..++.....
T Consensus 241 ~~~~~~h~~~v~~~~~sp~~~~l~s~-s~D~~v~iwd~~~~--~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 241 AGTLSGHASWVLNVAFCPDDTHFVSS-SSDKSVKVWDVGTR--TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred eEEEcCCCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCC--EEEEEEcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 4433 333456789999999965544 55677888876532 11222322233456788999998776655543
No 139
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.73 E-value=1.9e-05 Score=72.22 Aligned_cols=155 Identities=10% Similarity=0.057 Sum_probs=102.5
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE-EE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L-~V 147 (391)
....++++.++|+.++++..++.|..|+........... ........+.+++ ++++ +.
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~l~s 124 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK--------------------GHSNYVFCCNFNP-QSNLIVS 124 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECS-SSSEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc--------------------CCCCCEEEEEEcC-CCCEEEE
Confidence 356689999999999999999999999876222221110 0123456788988 5554 44
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
+.....|..+|..+++........ ......+++.++|++.++.+. +|.+..||..+++.
T Consensus 125 ~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 125 GSFDESVRIWDVKTGKCLKTLPAH----SDPVSAVHFNRDGSLIVSSSY-----------------DGLCRIWDTASGQC 183 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCC----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCE
T ss_pred EeCCCcEEEEECCCCEEEEEecCC----CCcEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCce
Confidence 544455889998877543222111 124677889999987776543 57899999887765
Q ss_pred EE-ecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 228 TV-LLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 228 ~~-~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
.. +.. .....+.++++|++++++.+ +..+.|..+++..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~~ 223 (312)
T 4ery_A 184 LKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSK 223 (312)
T ss_dssp EEEECCSSCCCEEEEEECTTSSEEEEE-ETTTEEEEEETTT
T ss_pred eeEEeccCCCceEEEEECCCCCEEEEE-cCCCeEEEEECCC
Confidence 33 322 22345678999999976665 5567888888653
No 140
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.71 E-value=8e-06 Score=77.67 Aligned_cols=147 Identities=16% Similarity=0.042 Sum_probs=97.3
Q ss_pred EEccCCCeeEEEec-----CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 75 AFDPLGRGPYTGVA-----DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 75 ~~d~~G~~ly~~~~-----~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
+..|+|+.+|+... ++.|..+|....+.+... +.+..|. +++++++..|||++
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I---------------------~vG~~P~-va~spDG~~lyVan 96 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI---------------------DGGFLPN-PVVADDGSFIAHAS 96 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEE---------------------EECSSCE-EEECTTSSCEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEE---------------------ECCCCCc-EEECCCCCEEEEEc
Confidence 34578888999876 579999998844443322 1245575 99999666799998
Q ss_pred CC----------CCeEEEeCCCCeeEEceeccCCC---cccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCc
Q 016318 150 AY----------FGLMKVGPEGGLATSLATEAEGV---PLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 150 ~~----------~gl~~~d~~~g~~~~~~~~~~~~---~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
.+ +.|..+|+.+.++..-.....+. ....|.++++++||+ +|+++.. +.+
T Consensus 97 ~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----------------~~~ 160 (386)
T 3sjl_D 97 TVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----------------PAP 160 (386)
T ss_dssp EEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----------------SSC
T ss_pred ccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----------------CCC
Confidence 42 33999999988654322111111 134799999999994 8998732 246
Q ss_pred eEEEEeCCCCeEEEeccC----CCCcce----EEEccCCCEEEEEeCCCCeE
Q 016318 216 RVLKYDPTTKQTTVLLRN----LQFPNG----LSLSKDKSFFVFCEGSVGRL 259 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~----~~~~ng----ia~~~d~~~l~v~et~~~~I 259 (391)
.|..+|.++++...-..- ..+|.| +++++||+.+|++-...+++
T Consensus 161 ~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred eEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 899999999876443221 224555 47889999777764333555
No 141
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.71 E-value=3.8e-07 Score=86.57 Aligned_cols=210 Identities=8% Similarity=-0.135 Sum_probs=118.4
Q ss_pred cCcceEEEccCCCeeEEEe----------cCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEE
Q 016318 69 QGPESMAFDPLGRGPYTGV----------ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~----------~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~ 138 (391)
..| ++++++||+.+|++. .++.|..+|....+......-... .-.....+|.++++
T Consensus 66 ~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~-------------~~~~~g~~P~~ia~ 131 (368)
T 1mda_H 66 FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA-------------PRFSVGPRVHIIGN 131 (368)
T ss_dssp TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS-------------CSCCBSCCTTSEEE
T ss_pred CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc-------------cccccCCCcceEEE
Confidence 368 899999999999987 357899999884333332210000 00012357999999
Q ss_pred ecCCCcEEEEECC-C-CeEE--EeCCCCeeEEceeccCCCcccCCcc----eeecCCCCEEEEeCCC------cccch--
Q 016318 139 DKKTGDLYIADAY-F-GLMK--VGPEGGLATSLATEAEGVPLRFTND----LDIDDEGNVYFTDSST------NYQRR-- 202 (391)
Q Consensus 139 d~~~g~L~V~d~~-~-gl~~--~d~~~g~~~~~~~~~~~~~~~~~~~----l~~d~~G~ly~td~~~------~~~~~-- 202 (391)
+++++.|||++.. . .+.. +|+.+ ++.+.. .+.....|.+ ++..++|.+.+.+... +....
T Consensus 132 SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v--~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t 207 (368)
T 1mda_H 132 CASSACLLFFLFGSSAAAGLSVPGASD--DQLTKS--ASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT 207 (368)
T ss_dssp CTTSSCEEEEECSSSCEEEEEETTTEE--EEEEEC--SSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC
T ss_pred cCCCCEEEEEccCCCCeEEEEEEchhh--ceEEEC--CCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee
Confidence 9966689999865 3 3777 78876 343321 1111112222 3444566544444321 00000
Q ss_pred hhe------ee------ecccCCCceEEEEeCCCCeEEEecc----------CCCCcce---EEEccCCCEEEEEeC---
Q 016318 203 NFM------QL------VFSAEDTGRVLKYDPTTKQTTVLLR----------NLQFPNG---LSLSKDKSFFVFCEG--- 254 (391)
Q Consensus 203 ~~~------~~------~~~~~~~g~l~~~d~~~~~~~~~~~----------~~~~~ng---ia~~~d~~~l~v~et--- 254 (391)
..+ .. ++-... +.+..+|..+++.++... ....|.| +++++|++.+||+..
T Consensus 208 ~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~ 286 (368)
T 1mda_H 208 GAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHS 286 (368)
T ss_dssp TTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECS
T ss_pred eeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEecccc
Confidence 000 00 000001 567778876544333211 1123555 899999999999754
Q ss_pred C-----CCeEEEEEeccccCccceeecc--cCCCCCceEeCCCCC-EEEEEc-CCCc
Q 016318 255 S-----VGRLHKYWLIGEKAGNLEAFAI--LPGYPDNVRTNEKGE-FWVAIH-CRRS 302 (391)
Q Consensus 255 ~-----~~~I~~~~~~g~~~g~~~~~~~--~~g~p~~i~~d~~G~-lwva~~-~~~~ 302 (391)
. ...+..++.+. .++... ..+.|.+|+++++|+ +|++.. ....
T Consensus 287 ~~~~~~~~~~~ViD~~t-----~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~ 338 (368)
T 1mda_H 287 RSCLAAAENTSSVTASV-----GQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp SCTTSCEEEEEEEESSS-----CCEEECCEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred CcccccCCCEEEEECCC-----CeEEEEEECCCCcceEEECCCCCEEEEEccCCCCe
Confidence 2 24677887543 233333 334699999999997 899887 3433
No 142
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.70 E-value=9e-08 Score=94.20 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=58.9
Q ss_pred CCcccCCcceeecCCCCEEE-EeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccC--CCCcceEEEccCCCEE
Q 016318 173 GVPLRFTNDLDIDDEGNVYF-TDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRN--LQFPNGLSLSKDKSFF 249 (391)
Q Consensus 173 ~~~~~~~~~l~~d~~G~ly~-td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~ngia~~~d~~~l 249 (391)
+.++..|++|++|++|+||| +|.+.. . ...++...+..++++++.+++++.+... ...+||++++||++.|
T Consensus 472 ~~~fnsPDnL~fd~~G~LWf~TD~~~~--~----~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktL 545 (592)
T 4a9v_A 472 QNMFNSPDGLGFDKAGRLWILTDGDSS--N----AGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTL 545 (592)
T ss_dssp TTCCCCEEEEEECTTCCEEEEECCCCC--C----SGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEE
T ss_pred cCccCCCCceEECCCCCEEEEeCCCcC--c----cccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEE
Confidence 34689999999999999999 675421 1 1122344566899999999999888754 3579999999999999
Q ss_pred EEEeC
Q 016318 250 VFCEG 254 (391)
Q Consensus 250 ~v~et 254 (391)
||+-.
T Consensus 546 fV~vQ 550 (592)
T 4a9v_A 546 FVGIQ 550 (592)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99854
No 143
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.69 E-value=1.2e-05 Score=76.45 Aligned_cols=196 Identities=8% Similarity=0.008 Sum_probs=119.2
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCc----eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLK----WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
...++++.++|+.++++..+|.|..|+... ...... .....+....++++++++++
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~--------------------~~~h~~~v~~~~~~~~~~~~ 128 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMAR--------------------FSNHSSSVKTVKFNAKQDNV 128 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEE--------------------CCCSSSCCCEEEECSSSTTB
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhh--------------------ccCCccceEEEEEcCCCCCE
Confidence 456889999999899999999999997652 111111 11123456789999842555
Q ss_pred EEEECC-CCeEEEeCCCCe------eEEceeccCCCcccCCcceeecCC-CCEEEEeCCCcccchhheeeecccCCCceE
Q 016318 146 YIADAY-FGLMKVGPEGGL------ATSLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRNFMQLVFSAEDTGRV 217 (391)
Q Consensus 146 ~V~d~~-~gl~~~d~~~g~------~~~~~~~~~~~~~~~~~~l~~d~~-G~ly~td~~~~~~~~~~~~~~~~~~~~g~l 217 (391)
+++... ..|..+|..+++ ......... .....+..+++.++ ++++++.+. +|.|
T Consensus 129 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~v 190 (416)
T 2pm9_A 129 LASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM-SSVDEVISLAWNQSLAHVFASAGS-----------------SNFA 190 (416)
T ss_dssp EEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC-CSSCCCCEEEECSSCTTEEEEESS-----------------SSCE
T ss_pred EEEEcCCCeEEEEECCCCcccccccccccccccc-CCCCCeeEEEeCCCCCcEEEEEcC-----------------CCCE
Confidence 444444 458888887764 111111111 11235788999998 677777543 5789
Q ss_pred EEEeCCCCeEEEeccC-------CCCcceEEEccCCCEEEEEeCCCC---eEEEEEeccccCccceeec-ccCCCCCceE
Q 016318 218 LKYDPTTKQTTVLLRN-------LQFPNGLSLSKDKSFFVFCEGSVG---RLHKYWLIGEKAGNLEAFA-ILPGYPDNVR 286 (391)
Q Consensus 218 ~~~d~~~~~~~~~~~~-------~~~~ngia~~~d~~~l~v~et~~~---~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~ 286 (391)
..||..+++....... ....+.++++|++..++++....+ .|..+++.... .....+. ...+....++
T Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~~ 269 (416)
T 2pm9_A 191 SIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLNQGHQKGILSLD 269 (416)
T ss_dssp EEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCCSCCSSCEEEEE
T ss_pred EEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEeecCccCceeEEE
Confidence 9999988776544332 345678999999743444445455 78888876421 1112222 2223456688
Q ss_pred eCC-CCCEEEEEcCCCchh
Q 016318 287 TNE-KGEFWVAIHCRRSLY 304 (391)
Q Consensus 287 ~d~-~G~lwva~~~~~~~~ 304 (391)
+++ +|+++++......+.
T Consensus 270 ~s~~~~~~l~s~~~dg~v~ 288 (416)
T 2pm9_A 270 WCHQDEHLLLSSGRDNTVL 288 (416)
T ss_dssp ECSSCSSCEEEEESSSEEE
T ss_pred eCCCCCCeEEEEeCCCCEE
Confidence 888 787666555444443
No 144
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.69 E-value=9.4e-06 Score=75.92 Aligned_cols=194 Identities=13% Similarity=0.044 Sum_probs=115.3
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE-EEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YIA 148 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L-~V~ 148 (391)
.+++++++|+.+.++..|+.|..|+.. .+...... ..........+++++ ++++ ..+
T Consensus 20 ~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~-------------------~~~h~~~v~~~~~sp-~g~~l~s~ 79 (345)
T 3fm0_A 20 WFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVL-------------------SEGHQRTVRKVAWSP-CGNYLASA 79 (345)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEE-------------------CSSCSSCEEEEEECT-TSSEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeee-------------------ccccCCcEEEEEECC-CCCEEEEE
Confidence 378999999989999999998888654 11111100 011124467899998 5654 444
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE-
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT- 227 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~- 227 (391)
.....+..++..++..+.+... .+ ....++.+++.++|++.++.+. ++.+..||..+++.
T Consensus 80 s~D~~v~iw~~~~~~~~~~~~~-~~-h~~~v~~v~~sp~~~~l~s~s~-----------------D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 80 SFDATTCIWKKNQDDFECVTTL-EG-HENEVKSVAWAPSGNLLATCSR-----------------DKSVWVWEVDEEDEY 140 (345)
T ss_dssp ETTSCEEEEEECCC-EEEEEEE-CC-CSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEEECTTSCE
T ss_pred ECCCcEEEEEccCCCeEEEEEc-cC-CCCCceEEEEeCCCCEEEEEEC-----------------CCeEEEEECCCCCCe
Confidence 4444577777666543332211 11 1235688999999988777643 56788888765432
Q ss_pred ---EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCchh
Q 016318 228 ---TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLY 304 (391)
Q Consensus 228 ---~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~ 304 (391)
..+.......+.++++|+++.+..+ ...+.|..++...........+....+....++++++|++.++....+.+.
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQELLASA-SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSCEEEE-ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEEecCcCCCeEEEEECCCCCEEEEE-eCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEE
Confidence 2222333456789999999966555 556677777654321101111221223345788999998777665555544
Q ss_pred h
Q 016318 305 S 305 (391)
Q Consensus 305 ~ 305 (391)
+
T Consensus 220 i 220 (345)
T 3fm0_A 220 I 220 (345)
T ss_dssp E
T ss_pred E
Confidence 3
No 145
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.68 E-value=2.1e-06 Score=83.97 Aligned_cols=175 Identities=14% Similarity=0.123 Sum_probs=104.3
Q ss_pred cccCcceEEEccCCC-eeEEEecCCEEEEEeCC-ce--eEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-
Q 016318 67 QIQGPESMAFDPLGR-GPYTGVADGRILFWDGL-KW--TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK- 141 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~-~ly~~~~~g~I~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~- 141 (391)
.+..|.+|++.++|. .+|++...|+|++++.+ .. ..+...... ..++ ......+-++||+++++
T Consensus 12 gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~---~~~g--------~~~~~e~Gllgia~~P~f 80 (463)
T 2wg3_C 12 GLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKL---VQSG--------IKGGDERGLLSLAFHPNY 80 (463)
T ss_dssp EESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTT---BCCC--------CSSSCCCSEEEEEECTTH
T ss_pred CCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcce---eccC--------ccccCCCcceeeEeCCCC
Confidence 478999999999984 48888899999999765 21 122221100 0000 00001245789999973
Q ss_pred --CCcEEEEECC-------------CCeEEEeCCCC--------eeEEceeccCCCcccCCcceeecCCCCEEEEeCCCc
Q 016318 142 --TGDLYIADAY-------------FGLMKVGPEGG--------LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTN 198 (391)
Q Consensus 142 --~g~L~V~d~~-------------~gl~~~d~~~g--------~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~ 198 (391)
++.|||+-+. ..|.++....+ ..+.+.........-+...|++++||+|||+.....
T Consensus 81 ~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 81 KKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp HHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred cCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 4789998542 24666655321 123332221111223567799999999999963321
Q ss_pred ccc--hhheeeecccCCCceEEEEeCCCC--------------------eEEEeccCCCCcceEEEccC-----CC-EEE
Q 016318 199 YQR--RNFMQLVFSAEDTGRVLKYDPTTK--------------------QTTVLLRNLQFPNGLSLSKD-----KS-FFV 250 (391)
Q Consensus 199 ~~~--~~~~~~~~~~~~~g~l~~~d~~~~--------------------~~~~~~~~~~~~ngia~~~d-----~~-~l~ 250 (391)
... .....+ .....|.|+|+|++++ ..+++..++..|.|++++++ |+ ++|
T Consensus 161 ~~~~~~~~~q~--~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~ 238 (463)
T 2wg3_C 161 ITLDDMEEMDG--LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTIL 238 (463)
T ss_dssp CCHHHHHHCTT--CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEE
T ss_pred CCCCccccccC--cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEE
Confidence 100 000000 1233588999999863 24567788899999999997 33 577
Q ss_pred EEeC
Q 016318 251 FCEG 254 (391)
Q Consensus 251 v~et 254 (391)
.+|.
T Consensus 239 ~~D~ 242 (463)
T 2wg3_C 239 CSDS 242 (463)
T ss_dssp EECC
T ss_pred eccc
Confidence 7775
No 146
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.68 E-value=4.7e-06 Score=83.75 Aligned_cols=198 Identities=11% Similarity=-0.007 Sum_probs=123.1
Q ss_pred EccCCCeeEEE-ecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCe
Q 016318 76 FDPLGRGPYTG-VADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (391)
Q Consensus 76 ~d~~G~~ly~~-~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl 154 (391)
.|+.+. +|+. ..++.|..+|....+.+.... ....|+++.+++++..|||++....|
T Consensus 163 ~d~~~~-~~V~~~~~~~V~viD~~t~~v~~~i~---------------------~g~~p~~v~~SpDGr~lyv~~~dg~V 220 (567)
T 1qks_A 163 WDLENL-FSVTLRDAGQIALIDGSTYEIKTVLD---------------------TGYAVHISRLSASGRYLFVIGRDGKV 220 (567)
T ss_dssp CCGGGE-EEEEETTTTEEEEEETTTCCEEEEEE---------------------CSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred cCCCce-EEEEeCCCCeEEEEECCCCeEEEEEe---------------------CCCCccceEECCCCCEEEEEcCCCeE
Confidence 444344 5554 456899999987333322211 23568999999955568999866669
Q ss_pred EEEeCC--CCeeEEceeccCCCcccCCcceeec----CCC-CEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 155 MKVGPE--GGLATSLATEAEGVPLRFTNDLDID----DEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 155 ~~~d~~--~g~~~~~~~~~~~~~~~~~~~l~~d----~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
..+|.. ++++. .....| ..|.+++++ +|| .+|+++.. .+.+..+|..+.+.
T Consensus 221 ~viD~~~~t~~~v--~~i~~G---~~P~~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 221 NMIDLWMKEPTTV--AEIKIG---SEARSIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDGETLEP 278 (567)
T ss_dssp EEEETTSSSCCEE--EEEECC---SEEEEEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEETTTCCE
T ss_pred EEEECCCCCCcEe--EEEecC---CCCceeEEccccCCCCCEEEEEEcc-----------------CCeEEEEECCCCcE
Confidence 999995 55332 221122 358899999 588 58887632 46888999888765
Q ss_pred EEecc--C----------CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceee-cccCCCCCceEeCCCCC-E
Q 016318 228 TVLLR--N----------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAF-AILPGYPDNVRTNEKGE-F 293 (391)
Q Consensus 228 ~~~~~--~----------~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~-~~~~g~p~~i~~d~~G~-l 293 (391)
..... + .....++..++++..++++....+.|+.++....+ ...+- .....+|.++.++++|+ +
T Consensus 279 ~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~--~~~v~~i~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 279 KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN--NLKTTEISAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS--EEEEEEEECCSSEEEEEECTTSCEE
T ss_pred EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc--cceeeeeeccccccCceECCCCCEE
Confidence 44321 1 01335788888888788887778999999865432 11111 11223577889999998 5
Q ss_pred EEEEcCCCchhhhhhhcCccceeeeeecCc
Q 016318 294 WVAIHCRRSLYSHLMALYPKIRHFLLKLPI 323 (391)
Q Consensus 294 wva~~~~~~~~~~~l~~~~~~~~~~~~l~~ 323 (391)
|++......+.. .....++++..++.
T Consensus 357 ~va~~~sn~V~V----iD~~t~kl~~~i~v 382 (567)
T 1qks_A 357 ITAANARNKLVV----IDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEGGGTEEEE----EETTTTEEEEEEEC
T ss_pred EEEeCCCCeEEE----EECCCCcEEEEEec
Confidence 676655444322 12334555555543
No 147
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.67 E-value=1.9e-05 Score=72.33 Aligned_cols=158 Identities=10% Similarity=0.056 Sum_probs=102.1
Q ss_pred ccccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD- 144 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~- 144 (391)
+.-..-.+++++|+|+.+.++..||.|..|+........... ........+++.+ +++
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~ 69 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ--------------------VTETPVRAGKFIA-RKNW 69 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEEEG-GGTE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee--------------------ccCCcEEEEEEeC-CCCE
Confidence 333456789999999999999999999999876222221111 0112345778888 555
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
|..+.....|..+|..+++........ ....+.+++.+++.+.++.+. ++.|..||..+
T Consensus 70 l~s~s~d~~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~sgs~-----------------D~~v~lWd~~~ 128 (304)
T 2ynn_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWEN 128 (304)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSEEEEEET-----------------TSCEEEEEGGG
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCC----CCcEEEEEEcCCCCEEEEECC-----------------CCeEEEEECCC
Confidence 455544445888898877543322221 135788999999987777643 57888898776
Q ss_pred C-eEEE-eccCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEecc
Q 016318 225 K-QTTV-LLRNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 225 ~-~~~~-~~~~~~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g 266 (391)
+ .... +...-...+.++++| +++ ++++-...+.|..+++..
T Consensus 129 ~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 129 NWALEQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp TTEEEEEECCCCSCEEEEEECTTCTT-EEEEEETTSEEEEEETTC
T ss_pred CcchhhhhcccCCcEEEEEECCCCCC-EEEEEeCCCeEEEEECCC
Confidence 6 3333 333334567899998 566 445546667888887643
No 148
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.66 E-value=6.9e-06 Score=76.32 Aligned_cols=187 Identities=15% Similarity=0.042 Sum_probs=112.9
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE-EEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L-~V~ 148 (391)
...+++++++|+.++++..+|.|..|+........... ....+..+++++ +++. +++
T Consensus 76 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------------------~~~~v~~~~~~~-~~~~l~~~ 133 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK---------------------SPVPVKRVEFSP-CGNYFLAI 133 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---------------------CSSCEEEEEECT-TSSEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---------------------cCCCeEEEEEcc-CCCEEEEe
Confidence 45688999999989999999999999876222221110 134567889998 5554 444
Q ss_pred ECC-----CCeEEEeCCCCeeEEceeccC---------CCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCC
Q 016318 149 DAY-----FGLMKVGPEGGLATSLATEAE---------GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 149 d~~-----~gl~~~d~~~g~~~~~~~~~~---------~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
... ..|..+|..++.......... .........++++++|+..++.+. +
T Consensus 134 ~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------d 196 (369)
T 3zwl_B 134 LDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK-----------------D 196 (369)
T ss_dssp ECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET-----------------T
T ss_pred cCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC-----------------C
Confidence 433 346666654432111000000 001125677888888876665432 5
Q ss_pred ceEEEEeCCC-CeEEE-eccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC
Q 016318 215 GRVLKYDPTT-KQTTV-LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE 292 (391)
Q Consensus 215 g~l~~~d~~~-~~~~~-~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~ 292 (391)
|.|..||..+ ++... +.........++++|+++.++.+ +..+.|..+++...+ ....+. .......++++++|.
T Consensus 197 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~--~~~~~~-~~~~~~~~~~~~~~~ 272 (369)
T 3zwl_B 197 GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTLQ--VLKKYE-TDCPLNTAVITPLKE 272 (369)
T ss_dssp SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC--EEEEEE-CSSCEEEEEECSSSS
T ss_pred CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe-cCCceEEEEECCCCc--eeeeec-CCCCceeEEecCCCc
Confidence 7899999987 44433 33334466789999999977666 556788888865421 111221 233456788899998
Q ss_pred EEEEEcC
Q 016318 293 FWVAIHC 299 (391)
Q Consensus 293 lwva~~~ 299 (391)
+.++...
T Consensus 273 ~l~~~~~ 279 (369)
T 3zwl_B 273 FIILGGG 279 (369)
T ss_dssp EEEEEEC
T ss_pred eEEEeec
Confidence 6555443
No 149
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.65 E-value=5.9e-06 Score=78.15 Aligned_cols=95 Identities=7% Similarity=0.039 Sum_probs=58.5
Q ss_pred CCCeeEEEe------cCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC-
Q 016318 79 LGRGPYTGV------ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY- 151 (391)
Q Consensus 79 ~G~~ly~~~------~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~- 151 (391)
+++.+|+.. .++.|+++|....+...... ....| ++++++++..|||++..
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~---------------------~g~~p-~i~~spdg~~lyv~~~~~ 71 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVP---------------------TAFNG-HVQVSNDGKKIYTMTTYH 71 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEE---------------------CCEEE-EEEECTTSSEEEEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEec---------------------CCCCC-ceEECCCCCEEEEEEecc
Confidence 344466654 35789999876322222111 13458 99999966679999741
Q ss_pred ---------CCeEEEeCCCCeeEEceeccCC--CcccCCcceeecCCC-CEEEEeC
Q 016318 152 ---------FGLMKVGPEGGLATSLATEAEG--VPLRFTNDLDIDDEG-NVYFTDS 195 (391)
Q Consensus 152 ---------~gl~~~d~~~g~~~~~~~~~~~--~~~~~~~~l~~d~~G-~ly~td~ 195 (391)
..|..+|..+.+...-.....+ .....|.++++++|| .+|+++.
T Consensus 72 ~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~ 127 (361)
T 2oiz_A 72 ERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA 127 (361)
T ss_dssp TTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE
T ss_pred cccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECC
Confidence 2289999987654322111111 012479999999999 5888763
No 150
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.65 E-value=1.4e-05 Score=76.27 Aligned_cols=154 Identities=7% Similarity=0.038 Sum_probs=99.8
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V 147 (391)
....+++++++|+.++++..+|.|..|+........ ... .........+.+ +++ |.+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~--------------------~~~-~~~~~~~~~~~~-~~~~l~~ 114 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSK--------------------MLK-RADYTAVDTAKL-QMRRFIL 114 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTT--------------------TSC-SCCEEEEEEECS-SSCEEEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceee--------------------EEe-cCCceEEEEEec-CCCEEEE
Confidence 345589999999999999999999999875211100 000 011122234566 455 555
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
+.....|..+|..+++........ ...+..+++.++|++.++.+. ++.+..||..+++.
T Consensus 115 ~~~dg~i~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~-----------------d~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 115 GTTEGDIKVLDSNFNLQREIDQAH----VSEITKLKFFPSGEALISSSQ-----------------DMQLKIWSVKDGSN 173 (420)
T ss_dssp EETTSCEEEECTTSCEEEEETTSS----SSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTCCC
T ss_pred EECCCCEEEEeCCCcceeeecccc----cCccEEEEECCCCCEEEEEeC-----------------CCeEEEEeCCCCcC
Confidence 554455889998887654432221 235788999999987766543 57899999877654
Q ss_pred E-EeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 228 T-VLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 228 ~-~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
. .+.........++++|+++.++.+ ...+.|..+++..
T Consensus 174 ~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 174 PRTLIGHRATVTDIAIIDRGRNVLSA-SLDGTIRLWECGT 212 (420)
T ss_dssp CEEEECCSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTT
T ss_pred ceEEcCCCCcEEEEEEcCCCCEEEEE-cCCCcEEEeECCC
Confidence 3 333334466789999999966655 5566788887653
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.65 E-value=1.1e-05 Score=72.22 Aligned_cols=146 Identities=13% Similarity=0.102 Sum_probs=92.9
Q ss_pred CccceEEEecCCCcEEEEECCCCeEEEeCCC-CeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeec
Q 016318 131 GRPLGLRFDKKTGDLYIADAYFGLMKVGPEG-GLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVF 209 (391)
Q Consensus 131 g~P~gi~~d~~~g~L~V~d~~~gl~~~d~~~-g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~ 209 (391)
+.+.++++++ +++.++......|+.+|.++ ++...+.... ....+.++++.++|+..++....
T Consensus 42 ~~v~~~~~sp-dg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~------------ 105 (297)
T 2ojh_A 42 ELFEAPNWSP-DGKYLLLNSEGLLYRLSLAGDPSPEKVDTGF---ATICNNDHGISPDGALYAISDKV------------ 105 (297)
T ss_dssp SCCEEEEECT-TSSEEEEEETTEEEEEESSSCCSCEECCCTT---CCCBCSCCEECTTSSEEEEEECT------------
T ss_pred cceEeeEECC-CCCEEEEEcCCeEEEEeCCCCCCceEecccc---ccccccceEECCCCCEEEEEEeC------------
Confidence 4466889998 56655444455699999988 7666543221 12356789999999755554210
Q ss_pred ccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCC--eEEEEEeccccCccceeecccCCCCCceEe
Q 016318 210 SAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG--RLHKYWLIGEKAGNLEAFAILPGYPDNVRT 287 (391)
Q Consensus 210 ~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~--~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~ 287 (391)
......|+.++..+++.+.+... ...+.++++||++.++++....+ +||.++..+ +....+...++.+..+..
T Consensus 106 -~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~ 180 (297)
T 2ojh_A 106 -EFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS---GVETRLTHGEGRNDGPDY 180 (297)
T ss_dssp -TTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT---CCEEECCCSSSCEEEEEE
T ss_pred -CCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCC---CcceEcccCCCccccceE
Confidence 11346899999888776665433 24678899999998876544444 566665543 223333333345567889
Q ss_pred CCCCC-EEEEE
Q 016318 288 NEKGE-FWVAI 297 (391)
Q Consensus 288 d~~G~-lwva~ 297 (391)
+++|+ ++++.
T Consensus 181 s~dg~~l~~~~ 191 (297)
T 2ojh_A 181 SPDGRWIYFNS 191 (297)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 99998 44443
No 152
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.63 E-value=1.4e-05 Score=75.94 Aligned_cols=112 Identities=9% Similarity=-0.071 Sum_probs=70.0
Q ss_pred cCCCeeEEEec-C-C---EEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC-
Q 016318 78 PLGRGPYTGVA-D-G---RILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY- 151 (391)
Q Consensus 78 ~~G~~ly~~~~-~-g---~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~- 151 (391)
++++.+|+... + . .|..+|....+..... +.+..| ++++++++..|||++..
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i---------------------~~g~~p-~i~~spDg~~lyv~n~~~ 87 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHV---------------------NGGFLP-NPVAAHSGSEFALASTSF 87 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEe---------------------cCCCCC-CeEECCCCCEEEEEeccc
Confidence 56666777654 2 2 7888887733333221 123457 99999966679999742
Q ss_pred ---------CCeEEEeCCCCeeEEceecc-CCC--cccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEE
Q 016318 152 ---------FGLMKVGPEGGLATSLATEA-EGV--PLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVL 218 (391)
Q Consensus 152 ---------~gl~~~d~~~g~~~~~~~~~-~~~--~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~ 218 (391)
+.|..+|+.+.+...-.... ... ....|.++++++|| .+|++... ..+.|.
T Consensus 88 ~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----------------~~~~v~ 151 (373)
T 2mad_H 88 SRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----------------AGPAVG 151 (373)
T ss_pred cccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----------------CCCeEE
Confidence 23889999876543211111 010 02468899999998 58888632 135688
Q ss_pred EEeCCCCeEE
Q 016318 219 KYDPTTKQTT 228 (391)
Q Consensus 219 ~~d~~~~~~~ 228 (391)
.+| ++++..
T Consensus 152 viD-~t~~~~ 160 (373)
T 2mad_H 152 LVV-QGGSSD 160 (373)
T ss_pred EEE-CCCCEE
Confidence 888 777654
No 153
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.63 E-value=8.8e-06 Score=75.05 Aligned_cols=176 Identities=7% Similarity=0.107 Sum_probs=108.4
Q ss_pred EEecCCCcEEEEE---CC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeeccc
Q 016318 137 RFDKKTGDLYIAD---AY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSA 211 (391)
Q Consensus 137 ~~d~~~g~L~V~d---~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~ 211 (391)
.+..+++.||.++ .. ..|++++.++...+.+..... .+++++| .||+++.+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~---------~~~~~~g~~iy~t~~g--------------- 165 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL---------FTCNTSDRYFYYNNPK--------------- 165 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC---------CCSEEETTEEEEECTT---------------
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc---------eEeeEECCEEEEEeCC---------------
Confidence 4444467899988 23 349999999877776653311 2345544 79999853
Q ss_pred CCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCC-CeEEEEEeccccCccceeecccCCCCCceEeCCC
Q 016318 212 EDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEK 290 (391)
Q Consensus 212 ~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~-~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~ 290 (391)
...|++.+.+++..+.+..+ +....++|++++||+++... .+|.|.+++|.. .+++.+- ..| .++++
T Consensus 166 --~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt~~-~~~---~~~~~ 233 (302)
T 3s25_A 166 --NGQLYRYDTASQSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN---PVVLTEA-NIE---HYNVY 233 (302)
T ss_dssp --TCCEEEEETTTTEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC---CEECSCS-CEE---EEEEE
T ss_pred --CceEEEEECCCCCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEECCCCC---eEEEeCC-Ccc---eEEEC
Confidence 36899999888877766543 22345679999999998643 689999998842 3333321 112 24444
Q ss_pred CC-EEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEEeCCCCCeeeceeEEE
Q 016318 291 GE-FWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVE 369 (391)
Q Consensus 291 G~-lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~is~~~ 369 (391)
|. +|.+.... ...+...+.+|...+.+.. +. +..+.
T Consensus 234 g~~Iy~~~~~~-------------------------------------~~~i~~~~~DG~~r~~l~~--~~----~~~i~ 270 (302)
T 3s25_A 234 GSLIFYQRGGD-------------------------------------NPALCVVKNDGTGFKELAK--GE----FCNIN 270 (302)
T ss_dssp TTEEEEEECSS-------------------------------------SCEEEEEETTSCCCEEEEE--SC----EEEEE
T ss_pred CCEEEEEECCC-------------------------------------CcEEEEEECCCCccEEeeC--Cc----cceEE
Confidence 44 44332221 0234555666653333322 11 22466
Q ss_pred EECCEEEEecCCCCeEEEEeCC
Q 016318 370 EKDGKLWMGSVLMPFVAVYDLS 391 (391)
Q Consensus 370 ~~~g~Lylgs~~~~~i~~~~~~ 391 (391)
..+++||........|.+++++
T Consensus 271 i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 271 VTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp ECSSEEEEEETTTCCEEEEESS
T ss_pred EeCCEEEEEECCCCeEEEEECC
Confidence 6889999999888888888764
No 154
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.62 E-value=5.7e-05 Score=71.88 Aligned_cols=151 Identities=16% Similarity=0.090 Sum_probs=98.6
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEEEEC
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIADA 150 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V~d~ 150 (391)
.++++.++|+.+.++..|+.|..|+........... ........+++++ +++ |+.+..
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~--------------------~h~~~v~~~~~~p-~~~~l~s~s~ 185 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ--------------------GHEQDIYSLDYFP-SGDKLVSGSG 185 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEECT-TSSEEEEEET
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc--------------------cCCCCEEEEEEcC-CCCEEEEecC
Confidence 478999999999999999999999876322221111 1124467889998 455 444544
Q ss_pred CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEE
Q 016318 151 YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTV 229 (391)
Q Consensus 151 ~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 229 (391)
...|..+|..+++........ .....+++.+ +|++.++.+. ++.+..||..+++...
T Consensus 186 d~~v~iwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~s~-----------------d~~v~iwd~~~~~~~~ 243 (393)
T 1erj_A 186 DRTVRIWDLRTGQCSLTLSIE-----DGVTTVAVSPGDGKYIAAGSL-----------------DRAVRVWDSETGFLVE 243 (393)
T ss_dssp TSEEEEEETTTTEEEEEEECS-----SCEEEEEECSTTCCEEEEEET-----------------TSCEEEEETTTCCEEE
T ss_pred CCcEEEEECCCCeeEEEEEcC-----CCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCcEEE
Confidence 444888899887654332211 2356778887 7877776543 5788889988776543
Q ss_pred ecc--------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 230 LLR--------NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 230 ~~~--------~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
... .......++++||++.++.+ ...+.|..+++..
T Consensus 244 ~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~~~ 287 (393)
T 1erj_A 244 RLDSENESGTGHKDSVYSVVFTRDGQSVVSG-SLDRSVKLWNLQN 287 (393)
T ss_dssp EEC------CCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEEC--
T ss_pred eecccccCCCCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEECCC
Confidence 221 12245689999999966554 5567888887653
No 155
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.62 E-value=4.4e-06 Score=78.48 Aligned_cols=150 Identities=10% Similarity=0.027 Sum_probs=92.1
Q ss_pred cceEEEecCCCcEEEEECCCCeEEEeCCCCeeEEcee-ccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeeccc
Q 016318 133 PLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLAT-EAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSA 211 (391)
Q Consensus 133 P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~-~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~ 211 (391)
...++|.+ ++.|.++...+.|..+|.++++...... ...+ .-...+.+++.++|+..++.+.
T Consensus 85 v~~~~~s~-d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~-H~~~V~~v~~spdg~~l~sgs~--------------- 147 (344)
T 4gqb_B 85 VADLTWVG-ERGILVASDSGAVELWELDENETLIVSKFCKYE-HDDIVSTVSVLSSGTQAVSGSK--------------- 147 (344)
T ss_dssp EEEEEEET-TTEEEEEETTSEEEEEEECTTSSCEEEEEEEEC-CSSCEEEEEECTTSSEEEEEET---------------
T ss_pred EEEEEEeC-CCeEEEEECCCEEEEEeccCCCceeEeeccccC-CCCCEEEEEECCCCCEEEEEeC---------------
Confidence 56889998 6778877655557778887764322111 1111 1135788999999988777643
Q ss_pred CCCceEEEEeCCCCeEEEeccC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCC-CCCceEeC
Q 016318 212 EDTGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPG-YPDNVRTN 288 (391)
Q Consensus 212 ~~~g~l~~~d~~~~~~~~~~~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g-~p~~i~~d 288 (391)
++.|..||.++++......+ -...+.+++++++..++++-...+.|..+++...+. ...+. ...+ .+..+++.
T Consensus 148 --d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 148 --DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp --TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEEC
T ss_pred --CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeeec
Confidence 57899999988876544433 345678999999876777666677888887654211 11121 1111 24457777
Q ss_pred CC-CCEEEEEcCCCch
Q 016318 289 EK-GEFWVAIHCRRSL 303 (391)
Q Consensus 289 ~~-G~lwva~~~~~~~ 303 (391)
++ ++++++......+
T Consensus 224 p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 224 PQQSEVFVFGDENGTV 239 (344)
T ss_dssp SSCTTEEEEEETTSEE
T ss_pred CCCCcceEEeccCCcE
Confidence 64 4566544444443
No 156
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.62 E-value=5.1e-06 Score=78.21 Aligned_cols=153 Identities=11% Similarity=0.107 Sum_probs=100.0
Q ss_pred cceEEEecCCCcEEEEEC------------CCC-eEEEeCC--CCeeEEceecc--CCCcccCCcceeecC--CC--CEE
Q 016318 133 PLGLRFDKKTGDLYIADA------------YFG-LMKVGPE--GGLATSLATEA--EGVPLRFTNDLDIDD--EG--NVY 191 (391)
Q Consensus 133 P~gi~~d~~~g~L~V~d~------------~~g-l~~~d~~--~g~~~~~~~~~--~~~~~~~~~~l~~d~--~G--~ly 191 (391)
|-.|.+++ +|.+|++.. ..| |+++|++ +++.+.+.... .......|.+|.+.+ +| +||
T Consensus 52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 45677777 788888861 344 9999987 34555553221 111234788888744 45 588
Q ss_pred EEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEec----cCCCCcceEEEccCCCEEEEEeC-------------
Q 016318 192 FTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL----RNLQFPNGLSLSKDKSFFVFCEG------------- 254 (391)
Q Consensus 192 ~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~----~~~~~~ngia~~~d~~~l~v~et------------- 254 (391)
+.+... ....-.++++++.++....+. ..+..||.++++++|+ +|+++.
T Consensus 131 Vvnh~~-------------~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~ 196 (355)
T 3sre_A 131 VVNHPG-------------SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEM 196 (355)
T ss_dssp EEECST-------------TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHH
T ss_pred EEECCC-------------CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchh
Confidence 988541 112235888998876654432 3467899999999998 777754
Q ss_pred ----CCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEEEEcCCCchhh
Q 016318 255 ----SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIHCRRSLYS 305 (391)
Q Consensus 255 ----~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~ 305 (391)
..++|++++. ++.+...+--..|++|+++++|+ +|++....+.++.
T Consensus 197 ~~~~~~g~vyr~d~-----~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~ 247 (355)
T 3sre_A 197 HLGLAWSFVTYYSP-----NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHV 247 (355)
T ss_dssp HTTCCCEEEEEECT-----TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred hccCCccEEEEEEC-----CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEE
Confidence 2357888863 23444443224699999999995 9999877665544
No 157
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.61 E-value=2.2e-05 Score=73.60 Aligned_cols=189 Identities=10% Similarity=0.035 Sum_probs=114.0
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCC--c-eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
-.++++.+++. +.+++.+|.|..|+.. + ....... .....+...+++|++ ++++++
T Consensus 85 v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~-------------------~~~H~~~V~~v~~sp-dg~~l~ 143 (344)
T 4gqb_B 85 VADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFC-------------------KYEHDDIVSTVSVLS-SGTQAV 143 (344)
T ss_dssp EEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEE-------------------EECCSSCEEEEEECT-TSSEEE
T ss_pred EEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeecc-------------------ccCCCCCEEEEEECC-CCCEEE
Confidence 45788988876 8899999999988765 1 1111110 001124567899998 566544
Q ss_pred -EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEEEEeCCCC
Q 016318 148 -ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 148 -~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
+....-|..+|..+++........ ....+.+++.+++ +++++.+. ++.|..||..++
T Consensus 144 sgs~d~~i~iwd~~~~~~~~~~~~h----~~~V~~~~~~~~~~~~l~s~s~-----------------D~~v~iwd~~~~ 202 (344)
T 4gqb_B 144 SGSKDICIKVWDLAQQVVLSSYRAH----AAQVTCVAASPHKDSVFLSCSE-----------------DNRILLWDTRCP 202 (344)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCC----SSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTSS
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCc----CCceEEEEecCCCCCceeeecc-----------------cccccccccccc
Confidence 444455888999887654322211 1346788888887 57666533 578999999877
Q ss_pred eEEEecc---CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEEEEcCCC
Q 016318 226 QTTVLLR---NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIHCRR 301 (391)
Q Consensus 226 ~~~~~~~---~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~ 301 (391)
+...... .....+.++++|++..++++-..++.|..+++...+ ....+....+....++++++|. +.++.....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC
Confidence 6543321 123467899998665466665667788888865321 1122222223345688888885 444443434
Q ss_pred ch
Q 016318 302 SL 303 (391)
Q Consensus 302 ~~ 303 (391)
.+
T Consensus 281 ~i 282 (344)
T 4gqb_B 281 SL 282 (344)
T ss_dssp CE
T ss_pred eE
Confidence 43
No 158
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.61 E-value=3.1e-05 Score=72.14 Aligned_cols=196 Identities=11% Similarity=0.056 Sum_probs=117.6
Q ss_pred ccccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
+....-.+++++++|+.+.+++.||.|..|+........... ........+++++ ++++
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~--------------------~~~~~v~~~~~s~-~~~~ 111 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP--------------------LRSSWVMTCAYAP-SGNY 111 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--------------------CSSSCEEEEEECT-TSSE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee--------------------cCCccEEEEEECC-CCCE
Confidence 333455688999999999999999999999876222111110 0123456788998 5665
Q ss_pred EEEECC-CCeEEEeCCCCe--eEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 146 YIADAY-FGLMKVGPEGGL--ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 146 ~V~d~~-~gl~~~d~~~g~--~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
+++... ..+..++..++. .+.. ....+. ......+.+.+++.+..+.. ++.+..||.
T Consensus 112 l~s~~~d~~v~iw~~~~~~~~~~~~-~~~~~h-~~~v~~~~~~~~~~l~s~s~------------------d~~i~~wd~ 171 (340)
T 1got_B 112 VACGGLDNICSIYNLKTREGNVRVS-RELAGH-TGYLSCCRFLDDNQIVTSSG------------------DTTCALWDI 171 (340)
T ss_dssp EEEEETTCEEEEEETTTCSBSCEEE-EEEECC-SSCEEEEEEEETTEEEEEET------------------TSCEEEEET
T ss_pred EEEEeCCCeEEEEECccCCCcceeE-EEecCC-CccEEEEEECCCCcEEEEEC------------------CCcEEEEEC
Confidence 444334 447777776542 1111 111111 12345566666666544432 578999999
Q ss_pred CCCeEEEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCC
Q 016318 223 TTKQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRR 301 (391)
Q Consensus 223 ~~~~~~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~ 301 (391)
.+++...... .-...+.++++|+++.+ ++-...+.|..+++... .....+....+....++++++|+++++.....
T Consensus 172 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sg~~d~~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLF-VSGACDASAKLWDVREG--MCRQTFTGHESDINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTC--SEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCcEEEEEcCCCCceEEEEECCCCCEE-EEEeCCCcEEEEECCCC--eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCC
Confidence 8887654433 33456789999999954 45456678888876532 11222322233456788999999777666555
Q ss_pred chhh
Q 016318 302 SLYS 305 (391)
Q Consensus 302 ~~~~ 305 (391)
.+.+
T Consensus 249 ~v~i 252 (340)
T 1got_B 249 TCRL 252 (340)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 5444
No 159
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.61 E-value=9.9e-06 Score=71.76 Aligned_cols=152 Identities=18% Similarity=0.162 Sum_probs=103.6
Q ss_pred ccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEecc--CCCCcceEEEccCCCEEEEEe
Q 016318 176 LRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLR--NLQFPNGLSLSKDKSFFVFCE 253 (391)
Q Consensus 176 ~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--~~~~~ngia~~~d~~~l~v~e 253 (391)
..|..++.++. +.||+++.. .+...|.++|++++++..-.. .-.+.-|+++ +++.||+..
T Consensus 20 ~~ftqGL~~~~-~~LyestG~---------------~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~lt 81 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGE---------------TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLT 81 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECC---------------TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEE
T ss_pred ccccccEEEEC-CEEEEECCC---------------CCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEE
Confidence 35778999986 799999743 224589999999998765443 2335556665 566799998
Q ss_pred CCCCeEEEEEeccccCccceeecc--cCCCCCceEeCCCCCEEEEEcCCCchhhhhhhcCccceeeeeecCccceeeeEE
Q 016318 254 GSVGRLHKYWLIGEKAGNLEAFAI--LPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLI 331 (391)
Q Consensus 254 t~~~~I~~~~~~g~~~g~~~~~~~--~~g~p~~i~~d~~G~lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~ 331 (391)
...+++++|+.+. .+.... .++.+.+++.| .+.+|++..+
T Consensus 82 w~~~~v~v~D~~t-----l~~~~ti~~~~~Gwglt~d-g~~L~vSdgs-------------------------------- 123 (243)
T 3mbr_X 82 WRNHEGFVYDLAT-----LTPRARFRYPGEGWALTSD-DSHLYMSDGT-------------------------------- 123 (243)
T ss_dssp SSSSEEEEEETTT-----TEEEEEEECSSCCCEEEEC-SSCEEEECSS--------------------------------
T ss_pred eeCCEEEEEECCc-----CcEEEEEeCCCCceEEeeC-CCEEEEECCC--------------------------------
Confidence 8899999998543 233222 34556777765 3569998643
Q ss_pred eecCccceEEEEECCC-CCEEEEEeC-CCCCeeeceeEEEEECCEEEEecCCCCeEEEEeC
Q 016318 332 HVGGRLHAMAVKYSPE-GKILQVLED-SKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 390 (391)
Q Consensus 332 ~~~~~~~~~v~~~d~~-g~~~~~~~~-~~g~~~~~is~~~~~~g~Lylgs~~~~~i~~~~~ 390 (391)
..+..+|+. .+++....- .+|..+..+.++...+|+||......+.|.|++.
T Consensus 124 -------~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 124 -------AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDP 177 (243)
T ss_dssp -------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECT
T ss_pred -------CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEEC
Confidence 235667764 455555543 2455555566666678999999989999999874
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.60 E-value=9.6e-06 Score=83.31 Aligned_cols=148 Identities=11% Similarity=0.094 Sum_probs=92.9
Q ss_pred CccceEEEecCCCcEEEEECCC-----CeEEEeCCCC-eeEEceeccCCCcccCCcceeecC--CCCEEEEeCCCcccch
Q 016318 131 GRPLGLRFDKKTGDLYIADAYF-----GLMKVGPEGG-LATSLATEAEGVPLRFTNDLDIDD--EGNVYFTDSSTNYQRR 202 (391)
Q Consensus 131 g~P~gi~~d~~~g~L~V~d~~~-----gl~~~d~~~g-~~~~~~~~~~~~~~~~~~~l~~d~--~G~ly~td~~~~~~~~ 202 (391)
..+..+++++++..|+++.... .|+.+|..++ ..+.+............+.+++.+ +|+++++...
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~------ 331 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR------ 331 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT------
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc------
Confidence 3456789998433477754433 4899999988 665554322211112346789999 9986555422
Q ss_pred hheeeecccCCCceEEEEeCCCCeEEEeccCCCCcce-EEEccCCCEEEEEeCCCC----eEEEEEeccccCccceeecc
Q 016318 203 NFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNG-LSLSKDKSFFVFCEGSVG----RLHKYWLIGEKAGNLEAFAI 277 (391)
Q Consensus 203 ~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ng-ia~~~d~~~l~v~et~~~----~I~~~~~~g~~~g~~~~~~~ 277 (391)
.+..+|+.++.+++..+.+..+...... ++++||++.|+++....+ +|+++++++. +.+.+..
T Consensus 332 ---------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~ 399 (706)
T 2z3z_A 332 ---------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG---KTKDLTP 399 (706)
T ss_dssp ---------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC---CCEESCC
T ss_pred ---------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC---CceeccC
Confidence 1235788999777777666544333344 789999998988866544 8888886652 2222222
Q ss_pred cCCCCCceEeCCCCCEEEEE
Q 016318 278 LPGYPDNVRTNEKGEFWVAI 297 (391)
Q Consensus 278 ~~g~p~~i~~d~~G~lwva~ 297 (391)
.+....++++++|+.++..
T Consensus 400 -~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 400 -ESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp -SSSEEEEEECTTSSEEEEE
T ss_pred -CCceEEEEECCCCCEEEEE
Confidence 1224567889999866544
No 161
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.59 E-value=4.6e-06 Score=86.17 Aligned_cols=160 Identities=12% Similarity=0.025 Sum_probs=93.7
Q ss_pred cCcceEEEccCCCeeEEEec-CC-----EEEEEeCC--ceeEEEeecCCC--cccCCCCCCccccccccCccCccceEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVA-DG-----RILFWDGL--KWTDFAFTSNNR--SELCNPKPIATSYLKNEHICGRPLGLRF 138 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~-~g-----~I~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~P~gi~~ 138 (391)
..+.++++++||+.++++.. ++ .|+.++.+ +........... +........................+++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 35778999999998888777 77 89999876 332222111000 0000000000000000000012457889
Q ss_pred ecCCCcEEEEECCCCeEEEeCCCC---eeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCC
Q 016318 139 DKKTGDLYIADAYFGLMKVGPEGG---LATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 139 d~~~g~L~V~d~~~gl~~~d~~~g---~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
++++..|+++.. ..|+.+|.+++ +.+.+... ...+..+++++||+ |.++. +
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~SPDG~~la~~~-------------------~ 171 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG-----EGFATDAKLSPKGGFVSFIR-------------------G 171 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCS-----SSCEEEEEECTTSSEEEEEE-------------------T
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccC-----CcccccccCCCCCCEEEEEe-------------------C
Confidence 994334565553 55999999887 55544322 12467789999997 44443 2
Q ss_pred ceEEEEeCCCCeEEEeccCCCC-----------------cceEEEccCCCEEEEEe
Q 016318 215 GRVLKYDPTTKQTTVLLRNLQF-----------------PNGLSLSKDKSFFVFCE 253 (391)
Q Consensus 215 g~l~~~d~~~~~~~~~~~~~~~-----------------~ngia~~~d~~~l~v~e 253 (391)
+.|+.+|..+++...+...... +.+++++|||++|+++.
T Consensus 172 ~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 172 RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 4799999988887766433221 47799999999888874
No 162
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.59 E-value=2.5e-05 Score=74.91 Aligned_cols=190 Identities=14% Similarity=0.102 Sum_probs=118.6
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE-EEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L-~V~ 148 (391)
...+++++++|+.+.+++.|+.|..|+......+... ....+...++++++ +++. +.+
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~--------------------~~h~~~V~~v~~~p-~~~~l~s~ 210 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM--------------------HGHDHNVSSVSIMP-NGDHIVSA 210 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC--------------------CCCSSCEEEEEECS-SSSEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE--------------------cCCCCCEEEEEEeC-CCCEEEEE
Confidence 4467899999998999999999999987632222211 11134467889998 5554 444
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
....-|..+|..++......... ....+.++..++|++.++.+. ++.+..||..+++..
T Consensus 211 s~D~~i~~wd~~~~~~~~~~~~h----~~~v~~~~~~~~g~~l~s~s~-----------------D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 211 SRDKTIKMWEVQTGYCVKTFTGH----REWVRMVRPNQDGTLIASCSN-----------------DQTVRVWVVATKECK 269 (410)
T ss_dssp ETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEE
T ss_pred eCCCeEEEEECCCCcEEEEEeCC----CccEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCcee
Confidence 44444888898877533221111 124677888999988877643 578888998877655
Q ss_pred Eec-cCCCCcceEEEccC--------------------CCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEe
Q 016318 229 VLL-RNLQFPNGLSLSKD--------------------KSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRT 287 (391)
Q Consensus 229 ~~~-~~~~~~ngia~~~d--------------------~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~ 287 (391)
... ......+.++++|+ +.++ ++-+..+.|..+++... .....+....+...++++
T Consensus 270 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~sgs~D~~i~iwd~~~~--~~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 270 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL-LSGSRDKTIKMWDVSTG--MCLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEE-EEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEE
T ss_pred eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEE-EEEeCCCeEEEEECCCC--ceEEEEECCCCcEEEEEE
Confidence 433 33345567888886 5544 44456678888876532 111222222234467889
Q ss_pred CCCCCEEEEEcCCCchh
Q 016318 288 NEKGEFWVAIHCRRSLY 304 (391)
Q Consensus 288 d~~G~lwva~~~~~~~~ 304 (391)
+++|.+.++......+.
T Consensus 347 ~~~g~~l~s~s~D~~i~ 363 (410)
T 1vyh_C 347 HSGGKFILSCADDKTLR 363 (410)
T ss_dssp CSSSSCEEEEETTTEEE
T ss_pred cCCCCEEEEEeCCCeEE
Confidence 99998666655544433
No 163
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.59 E-value=2.4e-05 Score=75.10 Aligned_cols=154 Identities=12% Similarity=0.092 Sum_probs=100.9
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE-E
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI-A 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V-~ 148 (391)
...++++.++++.+.+++.||.|..|+.......... ....+...+++|++ ++++++ +
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l--------------------~~h~~~V~~v~~~~-~~~~l~sg 168 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL--------------------KGHTDSVQDISFDH-SGKLLASC 168 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE--------------------CCCSSCEEEEEECT-TSSEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE--------------------eccCCcEEEEEEcC-CCCEEEEE
Confidence 4558899999999999999999999987621111111 11134467899998 566554 4
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
....-|..+|..+++........ ......+++.++|+..++.+. ++.+..||..+++..
T Consensus 169 s~D~~i~iwd~~~~~~~~~~~~h----~~~V~~v~~~p~~~~l~s~s~-----------------D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 169 SADMTIKLWDFQGFECIRTMHGH----DHNVSSVSIMPNGDHIVSASR-----------------DKTIKMWEVQTGYCV 227 (410)
T ss_dssp ETTSCCCEEETTSSCEEECCCCC----SSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTCCEE
T ss_pred eCCCeEEEEeCCCCceeEEEcCC----CCCEEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCcEE
Confidence 44444888888776533221111 134678899999987777643 578999999887654
Q ss_pred E-eccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 229 V-LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 229 ~-~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
. +.......+.+++++|++.+..+ ...+.|..+++..
T Consensus 228 ~~~~~h~~~v~~~~~~~~g~~l~s~-s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 228 KTFTGHREWVRMVRPNQDGTLIASC-SNDQTVRVWVVAT 265 (410)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTT
T ss_pred EEEeCCCccEEEEEECCCCCEEEEE-cCCCeEEEEECCC
Confidence 3 33333456788999999955544 5566777777643
No 164
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.58 E-value=8e-05 Score=70.43 Aligned_cols=198 Identities=11% Similarity=0.046 Sum_probs=116.4
Q ss_pred cCcceEEEccCCC-eeEEEecCCEEEEEeC----Ccee------EEEeecCCCcccCCCCCCccccccccCccCccceEE
Q 016318 69 QGPESMAFDPLGR-GPYTGVADGRILFWDG----LKWT------DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (391)
Q Consensus 69 ~gPe~i~~d~~G~-~ly~~~~~g~I~~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~ 137 (391)
....+++++++|+ .++++..+|.|..|+. ..-. ........ .... .......+....++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHP----FALS------ASSGKTTNQVTCLA 115 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECC----CCCC------------CBCEEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccc----cccc------ccccCCCCceEEEE
Confidence 4567999999999 9999999999999977 4111 11111000 0000 00001133577899
Q ss_pred EecCCCc-EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCce
Q 016318 138 FDKKTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGR 216 (391)
Q Consensus 138 ~d~~~g~-L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~ 216 (391)
+++ +++ |+++.....|..+|..+..+..+... ...+..+++.++|+..++.+. +|.
T Consensus 116 ~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~-----------------d~~ 172 (425)
T 1r5m_A 116 WSH-DGNSIVTGVENGELRLWNKTGALLNVLNFH-----RAPIVSVKWNKDGTHIISMDV-----------------ENV 172 (425)
T ss_dssp ECT-TSSEEEEEETTSCEEEEETTSCEEEEECCC-----CSCEEEEEECTTSSEEEEEET-----------------TCC
T ss_pred EcC-CCCEEEEEeCCCeEEEEeCCCCeeeeccCC-----CccEEEEEECCCCCEEEEEec-----------------CCe
Confidence 998 555 55555445588888655444444211 135678899999976665432 478
Q ss_pred EEEEeCCCCeEEEeccCCC-C---------------cceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCC
Q 016318 217 VLKYDPTTKQTTVLLRNLQ-F---------------PNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG 280 (391)
Q Consensus 217 l~~~d~~~~~~~~~~~~~~-~---------------~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g 280 (391)
+..||..+++......... . ...+++++++. ++++ ...+.|..+++...+ ....+....+
T Consensus 173 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~g~i~~~d~~~~~--~~~~~~~~~~ 248 (425)
T 1r5m_A 173 TILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIP-GPKGAIFVYQITEKT--PTGKLIGHHG 248 (425)
T ss_dssp EEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEE-CGGGCEEEEETTCSS--CSEEECCCSS
T ss_pred EEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEE-cCCCeEEEEEcCCCc--eeeeeccCCC
Confidence 8899988776544332221 2 67788998875 4444 567789999876421 1122222223
Q ss_pred CCCceEeCCCCCEEEEEcCCCch
Q 016318 281 YPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 281 ~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
....++++++|+++++......+
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCE
T ss_pred ceEEEEECCCCCEEEEEcCCCEE
Confidence 34568888888866655444443
No 165
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.58 E-value=2.1e-05 Score=74.96 Aligned_cols=201 Identities=10% Similarity=-0.051 Sum_probs=119.9
Q ss_pred CcceEEEcc-CCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE-E
Q 016318 70 GPESMAFDP-LGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY-I 147 (391)
Q Consensus 70 gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~-V 147 (391)
...++++++ +++.++++..||.|..|+........... .+ ............++++++++.+++ .
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~-----~~--------~~~~~~h~~~v~~~~~~p~~~~~l~s 149 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR-----EP--------VITLEGHTKRVGIVAWHPTAQNVLLS 149 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC-----SC--------SEEEECCSSCEEEEEECSSBTTEEEE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC-----Cc--------eEEecCCCCeEEEEEECcCCCCEEEE
Confidence 456889999 89989999999999999865110000000 00 001111235577899998432454 4
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
+.....|..+|..+++....... .+ ....+..+++.++|+++++.+. +|.|..||..+++.
T Consensus 150 ~~~dg~i~iwd~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAVLTLGP-DV-HPDTIYSVDWSRDGALICTSCR-----------------DKRVRVIEPRKGTV 210 (402)
T ss_dssp EETTSCEEEEETTTTEEEEEECT-TT-CCSCEEEEEECTTSSCEEEEET-----------------TSEEEEEETTTTEE
T ss_pred EcCCCEEEEEECCCCCccEEEec-CC-CCCceEEEEECCCCCEEEEEec-----------------CCcEEEEeCCCCce
Confidence 44445589999988764432210 11 1235678999999976666533 57899999988876
Q ss_pred EEec-cCC--CCcceEEEccCCCEEEEEe--CCCCeEEEEEeccccCccceeec-ccCCCCCceEeCCCCCEEE-EEcCC
Q 016318 228 TVLL-RNL--QFPNGLSLSKDKSFFVFCE--GSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWV-AIHCR 300 (391)
Q Consensus 228 ~~~~-~~~--~~~ngia~~~d~~~l~v~e--t~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~~d~~G~lwv-a~~~~ 300 (391)
.... ... ..+..+++++|++++.++. ...+.|..+++...... ..... ...+....++++++|++++ +....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d 289 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP-LSLQELDTSSGVLLPFFDPDTNIVYLCGKGD 289 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC-SEEEECCCCSSCEEEEEETTTTEEEEEETTC
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC-ceEEeccCCCceeEEEEcCCCCEEEEEEcCC
Confidence 5443 222 2367899999998555542 45677888886543211 11111 1223456788899998654 43333
Q ss_pred Cch
Q 016318 301 RSL 303 (391)
Q Consensus 301 ~~~ 303 (391)
..+
T Consensus 290 g~i 292 (402)
T 2aq5_A 290 SSI 292 (402)
T ss_dssp SCE
T ss_pred CeE
Confidence 333
No 166
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.56 E-value=4.9e-05 Score=70.81 Aligned_cols=195 Identities=13% Similarity=0.079 Sum_probs=117.6
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-CCc-
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGD- 144 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~-~g~- 144 (391)
..-.+++++++|+.+.++..+|.|..|+.. ......... ...+....+++.++ +++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--------------------~h~~~v~~~~~~~~~~~~~ 71 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--------------------GHEGPVWRVDWAHPKFGTI 71 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC--------------------CCSSCEEEEEECCGGGCSE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec--------------------CCCCcEEEEEeCCCCCCCE
Confidence 355688999999989999999999888754 222222111 11344568888752 145
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
|+.+.....|..+|..+++......... ....+..+++.++ |++.++.+. ++.+..||.
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~-----------------d~~i~v~d~ 132 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEF 132 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEEC
T ss_pred EEEeccCCEEEEEEcCCCceeEeeeecC--CCcceEEEEeCCCCCCCEEEEecC-----------------CCcEEEEec
Confidence 4555544558888888775433322111 1235678889888 877666533 578888988
Q ss_pred CCCe---EEEeccCCCCcceEEEcc-------------CCCEEEEEeCCCCeEEEEEeccccCccceeeccc---CCCCC
Q 016318 223 TTKQ---TTVLLRNLQFPNGLSLSK-------------DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL---PGYPD 283 (391)
Q Consensus 223 ~~~~---~~~~~~~~~~~ngia~~~-------------d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~---~g~p~ 283 (391)
.++. ...+.......+.++++| |++.++.+ ...+.|..+++..... .......+ .+...
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~-~~~~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQ-TYVLESTLEGHSDWVR 210 (379)
T ss_dssp CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEE-ETTSCEEEEEEETTTT-EEEEEEEECCCSSCEE
T ss_pred CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEE-eCCCeEEEEEecCCCc-ceeeEEEEecccCcEe
Confidence 7662 222323334567889998 68866555 5567888888764321 11111122 23345
Q ss_pred ceEeCCC---CCEEEEEcCCCchh
Q 016318 284 NVRTNEK---GEFWVAIHCRRSLY 304 (391)
Q Consensus 284 ~i~~d~~---G~lwva~~~~~~~~ 304 (391)
.++++++ |++.++......+.
T Consensus 211 ~~~~sp~~~~~~~l~s~~~dg~i~ 234 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQDRTCI 234 (379)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEE
T ss_pred EEEECCCCCCCCeEEEEeCCCEEE
Confidence 7888998 77666655544443
No 167
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.56 E-value=5e-06 Score=76.77 Aligned_cols=189 Identities=11% Similarity=-0.026 Sum_probs=115.4
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC--c-eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc--
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-- 144 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-- 144 (391)
...++++.++|+.++++..+|.|..|+.. . ....... .........+++++ +++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~--------------------~~~~~~v~~~~~~~-~~~~~ 71 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS--------------------LRYKHPLLCCNFID-NTDLQ 71 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEE--------------------EECSSCEEEEEEEE-SSSEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceee--------------------eecCCceEEEEECC-CCCcE
Confidence 45688999999989999999999888754 2 0111100 01134567899998 555
Q ss_pred EEEEECCCCeEEEeC-CCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 145 LYIADAYFGLMKVGP-EGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 145 L~V~d~~~gl~~~d~-~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
|+++.....|..+|. .+++...+... ........+++.+ +++.++.+. ++.+..||..
T Consensus 72 l~~~~~dg~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~~-----------------d~~i~iwd~~ 130 (342)
T 1yfq_A 72 IYVGTVQGEILKVDLIGSPSFQALTNN---EANLGICRICKYG-DDKLIAASW-----------------DGLIEVIDPR 130 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSEEECBSC---CCCSCEEEEEEET-TTEEEEEET-----------------TSEEEEECHH
T ss_pred EEEEcCCCeEEEEEeccCCceEecccc---CCCCceEEEEeCC-CCEEEEEcC-----------------CCeEEEEccc
Confidence 666665556999999 88876554321 0113467888888 776666533 4678888865
Q ss_pred C---------CeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc-ccCccceeecccCCCCCceEeCC-CCC
Q 016318 224 T---------KQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG-EKAGNLEAFAILPGYPDNVRTNE-KGE 292 (391)
Q Consensus 224 ~---------~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g-~~~g~~~~~~~~~g~p~~i~~d~-~G~ 292 (391)
+ ++.............+++++++ ++++ +..+.|..+++.. ...............+..+++++ +|+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 131 NYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE 207 (342)
T ss_dssp HHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC
T ss_pred ccccccccccCCeeeEEeeCCceEEEEecCCc--EEEE-eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC
Confidence 4 3221111222356788898877 5555 5567899998765 22111111112334456788888 888
Q ss_pred EEEEEcCCCch
Q 016318 293 FWVAIHCRRSL 303 (391)
Q Consensus 293 lwva~~~~~~~ 303 (391)
++++......+
T Consensus 208 ~l~~~~~dg~i 218 (342)
T 1yfq_A 208 GYACSSIDGRV 218 (342)
T ss_dssp EEEEEETTSEE
T ss_pred EEEEEecCCcE
Confidence 66655544443
No 168
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.56 E-value=1.4e-05 Score=76.13 Aligned_cols=191 Identities=12% Similarity=0.066 Sum_probs=120.8
Q ss_pred cCcceEEEccCC-CeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 69 QGPESMAFDPLG-RGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G-~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
....++++.++| +.++++..||.|..|+........... .....+....+++++++..|++
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------~~~~~~~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG------------------PDVHPDTIYSVDWSRDGALICT 193 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC------------------TTTCCSCEEEEEECTTSSCEEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe------------------cCCCCCceEEEEECCCCCEEEE
Confidence 356678999998 688999999999999876322222110 0111345678999984444566
Q ss_pred EECCCCeEEEeCCCCeeEEce-eccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 148 ADAYFGLMKVGPEGGLATSLA-TEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~-~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
+.....|..+|..+++..... .... ...+..+++.++|+++++..+ ...++.+..||..+++
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEKDRPHE---GTRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLE 256 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSC---SSSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCS
T ss_pred EecCCcEEEEeCCCCceeeeeccCCC---CCcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCcccc
Confidence 655555999999887644322 1211 124677889999987776511 0125789999987754
Q ss_pred E--EE-eccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc--CCCCCceEeCCCCCEEE
Q 016318 227 T--TV-LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL--PGYPDNVRTNEKGEFWV 295 (391)
Q Consensus 227 ~--~~-~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~--~g~p~~i~~d~~G~lwv 295 (391)
. .. ..........++++||++.++++....+.|..+++...+. ....+... .+...++++.++|.+.+
T Consensus 257 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~-~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 257 EPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP-FLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp SCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT-CEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred CCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc-ceEeecccccCCcccceEEecccccce
Confidence 2 12 1233345678999999998888876678888888765321 02222222 24567788888876544
No 169
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.55 E-value=5.9e-05 Score=71.84 Aligned_cols=182 Identities=10% Similarity=-0.012 Sum_probs=117.4
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
...++++.++|+.++++..+|.|..|+........... ...+....+.++ +..|+.+.
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~~v~~~~~~--~~~l~~~~ 193 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA--------------------GHQARVGCLSWN--RHVLSSGS 193 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------------------CCSSCEEEEEEE--TTEEEEEE
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec--------------------CCCCceEEEEEC--CCEEEEEc
Confidence 34678999999989999999999999876222222111 113445677775 35666666
Q ss_pred CCCCeEEEeCCCCe--eEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 150 AYFGLMKVGPEGGL--ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 150 ~~~gl~~~d~~~g~--~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
....|..+|..... ...+. .. ...+..+++.++|++.++.+. +|.|..||..+++.
T Consensus 194 ~dg~i~i~d~~~~~~~~~~~~-~~----~~~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~ 251 (401)
T 4aez_A 194 RSGAIHHHDVRIANHQIGTLQ-GH----SSEVCGLAWRSDGLQLASGGN-----------------DNVVQIWDARSSIP 251 (401)
T ss_dssp TTSEEEEEETTSSSCEEEEEE-CC----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTCSSE
T ss_pred CCCCEEEEecccCcceeeEEc-CC----CCCeeEEEEcCCCCEEEEEeC-----------------CCeEEEccCCCCCc
Confidence 55558888887332 22221 11 135678899999987777543 57899999987765
Q ss_pred EEec-cCCCCcceEEEccCCCEEEEEeC--CCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEc
Q 016318 228 TVLL-RNLQFPNGLSLSKDKSFFVFCEG--SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 228 ~~~~-~~~~~~ngia~~~d~~~l~v~et--~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~ 298 (391)
.... ........++++|++..++++.. ..+.|..+++...+ ....+ ...+....++++++|.+.++..
T Consensus 252 ~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 252 KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA--RVNTV-DAGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC--EEEEE-ECSSCEEEEEECSSSSEEEEEE
T ss_pred cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC--EEEEE-eCCCcEEEEEECCCCCeEEEEe
Confidence 4433 33456689999998876777643 56788888865321 11122 2233456788999998776643
No 170
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.55 E-value=1.6e-06 Score=81.64 Aligned_cols=196 Identities=8% Similarity=-0.073 Sum_probs=110.1
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCc--eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLK--WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
.-.+++++++|+.+.++..++.|..|+... +.... ......+...++++++++..|..
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~--------------------~~~~h~~~v~~~~~s~~~~~l~s 72 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR--------------------TFSDHDKIVTCVDWAPKSNRIVT 72 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC--------------------CBCCCSSCEEEEEECTTTCCEEE
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE--------------------EEecCCceEEEEEEeCCCCEEEE
Confidence 345889999999888888999888886541 12111 11112345678999984344555
Q ss_pred EECCCCeEEEeCCCCe-eEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 148 ADAYFGLMKVGPEGGL-ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~-~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
+.....|..+|..+++ .+..... .+ .......+++.++|++.++.+. ++.+..||.++++
T Consensus 73 ~s~d~~v~vwd~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 73 CSQDRNAYVYEKRPDGTWKQTLVL-LR-LNRAATFVRWSPNEDKFAVGSG-----------------ARVISVCYFEQEN 133 (377)
T ss_dssp EETTSSEEEC------CCCCEEEC-CC-CSSCEEEEECCTTSSCCEEEES-----------------SSCEEECCC----
T ss_pred EeCCCeEEEEEcCCCCceeeeeEe-cc-cCCceEEEEECCCCCEEEEEec-----------------CCeEEEEEECCcc
Confidence 5555558888887765 1111111 11 1234678888998876665432 4678888887765
Q ss_pred ----EEEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccC-------------ccceeec--ccCCCCCceE
Q 016318 227 ----TTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA-------------GNLEAFA--ILPGYPDNVR 286 (391)
Q Consensus 227 ----~~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~-------------g~~~~~~--~~~g~p~~i~ 286 (391)
...+.. .-...+.++++|+++.++.+ ...+.|..+++..... ...+... ...+....++
T Consensus 134 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 212 (377)
T 3dwl_C 134 DWWVSKHLKRPLRSTILSLDWHPNNVLLAAG-CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVG 212 (377)
T ss_dssp -CCCCEEECSSCCSCEEEEEECTTSSEEEEE-ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEE
T ss_pred cceeeeEeecccCCCeEEEEEcCCCCEEEEE-eCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEE
Confidence 344443 34467789999999966655 4566788887642110 0011111 1122345688
Q ss_pred eCCCCCEEEEEcCCCchhh
Q 016318 287 TNEKGEFWVAIHCRRSLYS 305 (391)
Q Consensus 287 ~d~~G~lwva~~~~~~~~~ 305 (391)
++++|+++++......+.+
T Consensus 213 ~sp~~~~l~~~~~d~~i~i 231 (377)
T 3dwl_C 213 FSPSGNALAYAGHDSSVTI 231 (377)
T ss_dssp ECTTSSCEEEEETTTEEC-
T ss_pred ECCCCCEEEEEeCCCcEEE
Confidence 9999986665555444443
No 171
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.55 E-value=0.00016 Score=66.58 Aligned_cols=197 Identities=10% Similarity=0.018 Sum_probs=118.0
Q ss_pred ccccCcceEEEccCC-CeeEEEecCCEEEEEeCC----ce-eEEEeecCCCcccCCCCCCccccccccCccCccceEEEe
Q 016318 66 NQIQGPESMAFDPLG-RGPYTGVADGRILFWDGL----KW-TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFD 139 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G-~~ly~~~~~g~I~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d 139 (391)
|--..-.++++.+++ +.+.+++.|+.|..|+.. .. ..+... .........++++
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~--------------------~~h~~~v~~~~~s 74 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF--------------------KGHSHIVQDCTLT 74 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEE--------------------ECCSSCEEEEEEC
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEE--------------------eCCcccEEEEEEC
Confidence 333345678888754 788999999999988653 11 111111 1112445678898
Q ss_pred cCCCcEEE-EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEE
Q 016318 140 KKTGDLYI-ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVL 218 (391)
Q Consensus 140 ~~~g~L~V-~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~ 218 (391)
+ ++++++ +.....|..+|..+++........ ......+++++++.+.++.+. ++.+.
T Consensus 75 ~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~-----------------D~~i~ 132 (319)
T 3frx_A 75 A-DGAYALSASWDKTLRLWDVATGETYQRFVGH----KSDVMSVDIDKKASMIISGSR-----------------DKTIK 132 (319)
T ss_dssp T-TSSEEEEEETTSEEEEEETTTTEEEEEEECC----SSCEEEEEECTTSCEEEEEET-----------------TSCEE
T ss_pred C-CCCEEEEEeCCCEEEEEECCCCCeeEEEccC----CCcEEEEEEcCCCCEEEEEeC-----------------CCeEE
Confidence 8 566544 444445888899887643322211 124678899999988777643 57788
Q ss_pred EEeCCCCeEEEeccCCCCcceEEEccCCC-----EEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCE
Q 016318 219 KYDPTTKQTTVLLRNLQFPNGLSLSKDKS-----FFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEF 293 (391)
Q Consensus 219 ~~d~~~~~~~~~~~~~~~~ngia~~~d~~-----~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~l 293 (391)
.||.+++....+.........+++.|.+. ..+++-...+.|..+++...+ ....+....+....++++++|++
T Consensus 133 vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 133 VWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFIGHNSNINTLTASPDGTL 210 (319)
T ss_dssp EEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEECCCCSCEEEEEECTTSSE
T ss_pred EEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeecCCCCcEEEEEEcCCCCE
Confidence 89987766666654444566778777432 134444556778877764311 11112222233456888999997
Q ss_pred EEEEcCCCchhhh
Q 016318 294 WVAIHCRRSLYSH 306 (391)
Q Consensus 294 wva~~~~~~~~~~ 306 (391)
.++......+.++
T Consensus 211 l~s~~~dg~i~iw 223 (319)
T 3frx_A 211 IASAGKDGEIMLW 223 (319)
T ss_dssp EEEEETTCEEEEE
T ss_pred EEEEeCCCeEEEE
Confidence 7766555555443
No 172
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.54 E-value=1.4e-05 Score=75.73 Aligned_cols=204 Identities=9% Similarity=0.025 Sum_probs=120.5
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
....++++.++|+.++++..+|.|..|+................... ...............+.+.+ ++.++++
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 223 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSS-----INAENHSGDGSLGVDVEWVD-DDKFVIP 223 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------------------CCCBSCCEEEE-TTEEEEE
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccc-----eeeccccCCcceeeEEEEcC-CCEEEEE
Confidence 34568899999998999999999999987622222211110000000 00000001112266788887 6777777
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
.....|..+|..+++........ ......+++.++|+++++.+. +|.+..||..+++..
T Consensus 224 ~~~g~i~~~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~ 282 (425)
T 1r5m_A 224 GPKGAIFVYQITEKTPTGKLIGH----HGPISVLEFNDTNKLLLSASD-----------------DGTLRIWHGGNGNSQ 282 (425)
T ss_dssp CGGGCEEEEETTCSSCSEEECCC----SSCEEEEEEETTTTEEEEEET-----------------TSCEEEECSSSBSCS
T ss_pred cCCCeEEEEEcCCCceeeeeccC----CCceEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCccc
Confidence 66566999998876433221111 134678899999986666533 578999998776543
Q ss_pred Eec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCch
Q 016318 229 VLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 229 ~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
... ........++++|++ .++.+ ...+.|..+++...+ ....+....+....++++++|++.++......+
T Consensus 283 ~~~~~~~~~i~~~~~~~~~-~l~~~-~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 283 NCFYGHSQSIVSASWVGDD-KVISC-SMDGSVRLWSLKQNT--LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp EEECCCSSCEEEEEEETTT-EEEEE-ETTSEEEEEETTTTE--EEEEEECTTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred eEecCCCccEEEEEECCCC-EEEEE-eCCCcEEEEECCCCc--EeEecccCCccEEEEEEcCCCCEEEEEECCCeE
Confidence 333 233456789999999 45544 567788888865321 111222222345678899999866665544443
No 173
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.54 E-value=3.3e-06 Score=79.61 Aligned_cols=190 Identities=8% Similarity=-0.027 Sum_probs=113.9
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEEC
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~ 150 (391)
..++++.++|+.+.++..++.|..|+........... ...+....+++.++++.++++..
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~--------------------~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN--------------------AHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEECTTCSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc--------------------CCCCCEEEEEEccCCCceeeeec
Confidence 4578999999989999999999999877322222111 11244567888874444555444
Q ss_pred C-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 151 Y-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 151 ~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
. ..|..+|..+++........ .....+..+++.+++ +++++.+. ++.|..||..+++..
T Consensus 202 ~dg~v~~wd~~~~~~~~~~~~~--~~~~~v~~v~~sp~~~~~la~g~~-----------------d~~i~~wd~~~~~~~ 262 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATRIDFC--ASDTIPTSVTWHPEKDDTFACGDE-----------------TGNVSLVNIKNPDSA 262 (357)
T ss_dssp TTSCEEECCTTSSSCBCBCCCT--TCCSCEEEEEECTTSTTEEEEEES-----------------SSCEEEEESSCGGGC
T ss_pred cCCceEEEECCCCceeeeeeec--cccccccchhhhhcccceEEEeec-----------------ccceeEEECCCCcEe
Confidence 4 44788888776433221111 112346778888864 56555422 478889998776543
Q ss_pred E-eccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCC-CCCEEEEEcCCCc
Q 016318 229 V-LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNE-KGEFWVAIHCRRS 302 (391)
Q Consensus 229 ~-~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~ 302 (391)
. +.......+.++++|++..++++-...+.|..+++.. ++........+....+++++ +|.++++......
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~---~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF---SEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS---CEEEEECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC---CcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 3 3323345678999999854555545566787777543 22111111223456788886 7777766554433
No 174
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.53 E-value=5.7e-05 Score=78.52 Aligned_cols=194 Identities=9% Similarity=0.030 Sum_probs=120.9
Q ss_pred ccccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-
Q 016318 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD- 144 (391)
Q Consensus 66 ~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~- 144 (391)
+.-....+++++|+|+.+.++..+|.|..|+........... ...+...++++++ +++
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~--------------------~~~~~v~~~~~s~-~~~~ 69 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ--------------------VTETPVRAGKFIA-RKNW 69 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEEEG-GGTE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe--------------------cCCCcEEEEEEeC-CCCE
Confidence 333466789999999999999999999999866222221111 1134567899999 555
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
|.++.....|..+|..+++........ ...+..+++.++|...++.+. +|.+..||..+
T Consensus 70 l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~-----------------dg~i~vw~~~~ 128 (814)
T 3mkq_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWEN 128 (814)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSEEEEEET-----------------TSEEEEEEGGG
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecC----CCCEEEEEEeCCCCEEEEEcC-----------------CCEEEEEECCC
Confidence 555554445888998877543322211 134678899999976555432 57888898876
Q ss_pred C-eEEEe-ccCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEeccccCccceeecc-cCCCCCceEeCC--CCCEEEEEc
Q 016318 225 K-QTTVL-LRNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNE--KGEFWVAIH 298 (391)
Q Consensus 225 ~-~~~~~-~~~~~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~--~G~lwva~~ 298 (391)
+ ..... ...-.....++++| +++.++.+ +..+.|..+++..... ...+.. ..+....++..+ +|.+.++..
T Consensus 129 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~dg~v~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASG-CLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp TSEEEEEEECCSSCEEEEEEETTEEEEEEEE-ETTSEEEEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CceEEEEEcCCCCcEEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 5 33333 33334567899999 77755554 5567888888754321 111211 223455677777 787666655
Q ss_pred CCCchh
Q 016318 299 CRRSLY 304 (391)
Q Consensus 299 ~~~~~~ 304 (391)
..+.+.
T Consensus 206 ~dg~i~ 211 (814)
T 3mkq_A 206 DDLTIK 211 (814)
T ss_dssp TTSEEE
T ss_pred CCCEEE
Confidence 544443
No 175
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.53 E-value=0.00014 Score=67.03 Aligned_cols=182 Identities=11% Similarity=0.074 Sum_probs=111.6
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE-E
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI-A 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V-~ 148 (391)
.-.++++.++|+.+++++.|+.|..|+...-+.+.... ...+....+++++ ++.+++ +
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~~l~s~ 125 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV--------------------GHKSDVMSVDIDK-KASMIISG 125 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEECT-TSCEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc--------------------cCCCcEEEEEEcC-CCCEEEEE
Confidence 44578899999989999999999999876222222111 1124467888988 565544 4
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC------CCCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD------EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~------~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
...+.|..+|.++..+..+... ......+.+.+ ++...++.+ .++.+..||.
T Consensus 126 s~D~~i~vwd~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~~wd~ 183 (319)
T 3frx_A 126 SRDKTIKVWTIKGQCLATLLGH-----NDWVSQVRVVPNEKADDDSVTIISAG-----------------NDKMVKAWNL 183 (319)
T ss_dssp ETTSCEEEEETTSCEEEEECCC-----SSCEEEEEECCC------CCEEEEEE-----------------TTSCEEEEET
T ss_pred eCCCeEEEEECCCCeEEEEecc-----CCcEEEEEEccCCCCCCCccEEEEEe-----------------CCCEEEEEEC
Confidence 4445588888876655444221 12344555554 333444443 2578889998
Q ss_pred CCCeEEEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEc
Q 016318 223 TTKQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 223 ~~~~~~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~ 298 (391)
.+.+...... .-...+.++++||++++..+ ...+.|..+++...+ ....+ ........++++++|.+.++..
T Consensus 184 ~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~-~~dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 184 NQFQIEADFIGHNSNINTLTASPDGTLIASA-GKDGEIMLWNLAAKK--AMYTL-SAQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp TTTEEEEEECCCCSCEEEEEECTTSSEEEEE-ETTCEEEEEETTTTE--EEEEE-ECCSCEEEEEECSSSSEEEEEE
T ss_pred CcchhheeecCCCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCc--EEEEe-cCCCcEEEEEEcCCCCEEEEEc
Confidence 8776654332 33456789999999965544 556788888765421 11111 1223345688999998665543
No 176
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.52 E-value=2.2e-06 Score=86.11 Aligned_cols=146 Identities=12% Similarity=-0.046 Sum_probs=93.1
Q ss_pred eEEEecCCCc-EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCC
Q 016318 135 GLRFDKKTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 135 gi~~d~~~g~-L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
..+++++++. +|++....++..+|.++++.+.+.... ..++++++||+..++.+.. ...
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-------~~~~~~spDG~~la~~~~~-------------~~~ 173 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-------GFGFVSDIRGDLIAGLGFF-------------GGG 173 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-------SCEEEEEEETTEEEEEEEE-------------ETT
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-------CceEEECCCCCEEEEEEEc-------------CCC
Confidence 3455553334 566555566778888888877665321 1778899999866643210 111
Q ss_pred CceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCC-CeEEEEEeccccCccceeecccCCCCCceE------
Q 016318 214 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFAILPGYPDNVR------ 286 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~-~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~------ 286 (391)
...|+.+|.++++.+.+.......+.++++|||+.|+.++..+ .+|+++++++. +...+....+.+.+++
T Consensus 174 ~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG---SVEDLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC---CEEECCCSCSHHHHHCCSEEEE
T ss_pred CeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC---cEEEccCCCcChhhhhhccccc
Confidence 2569999999998888765555568899999999888665433 27999987653 2232222222234455
Q ss_pred --eCCCCCEEEEEcCCCch
Q 016318 287 --TNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 287 --~d~~G~lwva~~~~~~~ 303 (391)
.+++|.++++.......
T Consensus 251 ~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp EEECTTSCEEEEEEETTEE
T ss_pred eeEcCCCcEEEEEEcCCcE
Confidence 89999877766544433
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.50 E-value=2e-05 Score=74.34 Aligned_cols=199 Identities=15% Similarity=0.100 Sum_probs=113.3
Q ss_pred EEEccCCCeeEEEec-CC--EEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEEC
Q 016318 74 MAFDPLGRGPYTGVA-DG--RILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (391)
Q Consensus 74 i~~d~~G~~ly~~~~-~g--~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~ 150 (391)
.++.|||+.+++... +| .|+.++.+.-...... .. ......+.++++++..|+++..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-~~-------------------~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT-EG-------------------RGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC-CS-------------------SCBCSSSCEECTTSSEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee-eC-------------------CCCCccceEEcCCCCEEEEEeC
Confidence 468899996666655 55 5888887622211111 00 0111225578885556777766
Q ss_pred CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCc--cc-ch--hheeeecccCCCceEEEEeCCCC
Q 016318 151 YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTN--YQ-RR--NFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 151 ~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~--~~-~~--~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
...|+.+|.++++.+.+.....+. ........+++|...++..... +. .. ..+...........|+.+|.+++
T Consensus 101 ~~~l~~~d~~~g~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVYQVPAEW--VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred CCeEEEEECCCCcceeeeechhhc--ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 667999999998776654322111 0011223477887766421100 00 00 00111223445578999999999
Q ss_pred eEEEeccCCCCcceEEEcc-CCCEEEEEeCC-----CCeEEEEEeccccCccceeecccC-C-CCCceEeCCCCC-E-EE
Q 016318 226 QTTVLLRNLQFPNGLSLSK-DKSFFVFCEGS-----VGRLHKYWLIGEKAGNLEAFAILP-G-YPDNVRTNEKGE-F-WV 295 (391)
Q Consensus 226 ~~~~~~~~~~~~ngia~~~-d~~~l~v~et~-----~~~I~~~~~~g~~~g~~~~~~~~~-g-~p~~i~~d~~G~-l-wv 295 (391)
+.+.+.........++++| ||+.|.++... ..+|+.++.++.. ...+.... + .....+.+++|+ + |+
T Consensus 179 ~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 179 ESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN---MRKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp CEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC---CEESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred ceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc---eEEeeeCCCCcccccceECCCCCEEEEE
Confidence 9888776555678899999 99877665443 3489999876632 22222211 1 122457888987 4 44
Q ss_pred EE
Q 016318 296 AI 297 (391)
Q Consensus 296 a~ 297 (391)
+.
T Consensus 256 ~~ 257 (388)
T 3pe7_A 256 SY 257 (388)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 178
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.50 E-value=5.2e-05 Score=75.81 Aligned_cols=197 Identities=12% Similarity=0.011 Sum_probs=115.5
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCce----eEEEeecCCCcccCCCCCCccccccccCccCc-cceEEEec--CC
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKW----TDFAFTSNNRSELCNPKPIATSYLKNEHICGR-PLGLRFDK--KT 142 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-P~gi~~d~--~~ 142 (391)
.+.+++++++|+.+.++. ++.|..|+.+.. ..... .....+. ...+++++ ++
T Consensus 20 ~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~--------------------~~~h~~~~v~~~~~sp~~~~ 78 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQ--------------------FTGHGSSVVTTVKFSPIKGS 78 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEE--------------------ECTTTTSCEEEEEECSSTTC
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceE--------------------EecCCCceEEEEEECcCCCC
Confidence 567899999999676666 788888876521 11111 1112344 67899998 65
Q ss_pred CcEEEEECCCCeEEEeCCCC------eeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCce
Q 016318 143 GDLYIADAYFGLMKVGPEGG------LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGR 216 (391)
Q Consensus 143 g~L~V~d~~~gl~~~d~~~g------~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~ 216 (391)
..|.++.....|..+|..++ ..+..... .+ .......+++.++|+..++.... ....+.
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~~~-------------~~~~~~ 143 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF-QV-LAGPISDISWDFEGRRLCVVGEG-------------RDNFGV 143 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE-EC-CSSCEEEEEECTTSSEEEEEECC-------------SSCSEE
T ss_pred CEEEEecCCCEEEEEeCCCCcccccccccccchh-hc-ccccEEEEEEeCCCCEEEEeccC-------------CCCccE
Confidence 55666665445777777544 22222111 11 12347889999999866665321 112367
Q ss_pred EEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCC---CCCceEeCCC-CC
Q 016318 217 VLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG---YPDNVRTNEK-GE 292 (391)
Q Consensus 217 l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g---~p~~i~~d~~-G~ 292 (391)
++.||. ......+.......+.++++|+++.++++-...+.|..+++... .....+....+ ....++++++ |+
T Consensus 144 v~~~d~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 144 FISWDS-GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF--KFSASDRTHHKQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp EEETTT-CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB--EEEEEECSSSCTTCCEEEEEECSTTCC
T ss_pred EEEEEC-CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc--ceeeeecccCCCCceEEEEEECCCCCC
Confidence 888883 33444444444567889999999854555566778888875431 11112222222 3456888998 88
Q ss_pred EEEEEcCCCchhh
Q 016318 293 FWVAIHCRRSLYS 305 (391)
Q Consensus 293 lwva~~~~~~~~~ 305 (391)
+.++......+..
T Consensus 221 ~l~~~~~dg~i~v 233 (615)
T 1pgu_A 221 FVITVGSDRKISC 233 (615)
T ss_dssp EEEEEETTCCEEE
T ss_pred EEEEEeCCCeEEE
Confidence 6665544444433
No 179
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.49 E-value=6.6e-05 Score=70.45 Aligned_cols=196 Identities=12% Similarity=0.010 Sum_probs=115.5
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
...++++.++|+.+.++..++.+..++...-. ...... . ........+....+.+.+++..|+.+.
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~-----~~~~~~-~--------~~~~~~h~~~v~~~~~~~~~~~l~t~s 173 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDK-----NENMAA-K--------KKSVAMHTNYLSACSFTNSDMQILTAS 173 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCT-----TCCSGG-G--------CEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccc-----cccccc-c--------ceeeeccCCcEEEEEEeCCCCEEEEEe
Confidence 45688999999999999999998888653100 000000 0 000111234456788888433456565
Q ss_pred CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC--CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD--EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~--~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
....|..+|..+++......... .....+++.+ +|++.++.+. +|.+..||..+++.
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~g~~l~sgs~-----------------Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFHGHG----ADVLCLDLAPSETGNTFVSGGC-----------------DKKAMVWDMRSGQC 232 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEECCS----SCEEEEEECCCSSCCEEEEEET-----------------TSCEEEEETTTCCE
T ss_pred CCCcEEEEeCCCCeEEEEEcCCC----CCeEEEEEEeCCCCCEEEEEeC-----------------CCeEEEEECCCCcE
Confidence 55558888988775432222111 1345566654 5676666533 58899999988875
Q ss_pred EEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc--CCCCCceEeCCCCCEEEEEcCCCch
Q 016318 228 TVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL--PGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 228 ~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~--~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
..... .-...+.++++|+++.+..+ ...+.|..+++...+ ....+... ......+.++++|.+.++......+
T Consensus 233 ~~~~~~h~~~v~~v~~~p~~~~l~s~-s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i 308 (354)
T 2pbi_B 233 VQAFETHESDVNSVRYYPSGDAFASG-SDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 308 (354)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEecCCCCCeEEEEEeCCCCEEEEE-eCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcE
Confidence 44433 33467899999999965544 556778888765421 12222211 1123467889999977665554443
No 180
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.49 E-value=6.7e-05 Score=71.38 Aligned_cols=159 Identities=13% Similarity=0.088 Sum_probs=103.0
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V 147 (391)
....++++.++|+.+++++.++.|..|+.......... ....+...++++++ +++ |+.
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~--------------------~~h~~~v~~~~~~~-~~~~l~s 198 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL--------------------IGHRATVTDIAIID-RGRNVLS 198 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE--------------------ECCSSCEEEEEEET-TTTEEEE
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE--------------------cCCCCcEEEEEEcC-CCCEEEE
Confidence 45678999999999999999999999987621111111 11134567899998 555 555
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCC--------------------cccCCcceeecCCCCEEEEeCCCcccchhheee
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGV--------------------PLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~--------------------~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~ 207 (391)
+.....|..+|..+++........... .......++++++|++.++.+.
T Consensus 199 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----------- 267 (420)
T 3vl1_A 199 ASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV----------- 267 (420)
T ss_dssp EETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET-----------
T ss_pred EcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC-----------
Confidence 554455889998877544322211000 0134556777888876666533
Q ss_pred ecccCCCceEEEEeCCCCeEEEec-cC-CCCcceEEEccCCC-EEEEEeCCCCeEEEEEecc
Q 016318 208 VFSAEDTGRVLKYDPTTKQTTVLL-RN-LQFPNGLSLSKDKS-FFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~~~~~~~~-~~-~~~~ngia~~~d~~-~l~v~et~~~~I~~~~~~g 266 (391)
+|.+..||..+++..... .. ....+.++++|+++ .++.+ ...+.|..+++..
T Consensus 268 ------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g-~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 268 ------SGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAG-YENGMLAQWDLRS 322 (420)
T ss_dssp ------TSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEE-ETTSEEEEEETTC
T ss_pred ------CCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEE-eCCCeEEEEEcCC
Confidence 578999998877644333 22 24567899999998 56555 5567898888764
No 181
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.49 E-value=4.2e-05 Score=72.83 Aligned_cols=187 Identities=9% Similarity=-0.052 Sum_probs=115.8
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEEEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIAD 149 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V~d 149 (391)
.++++ +++.++++..+|.|..|+.. .-...... ....+...++++++ +++ |.++.
T Consensus 180 ~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------------~~~~~~v~~~~~~~-~~~~l~s~~ 236 (401)
T 4aez_A 180 GCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTL--------------------QGHSSEVCGLAWRS-DGLQLASGG 236 (401)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE--------------------ECCSSCEEEEEECT-TSSEEEEEE
T ss_pred EEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEE--------------------cCCCCCeeEEEEcC-CCCEEEEEe
Confidence 34455 45668888888888888765 21111111 11135567899998 555 55555
Q ss_pred CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
..+.|..+|..+++........ ...+..+++.++| +++++.++ ..++.+..||..+++..
T Consensus 237 ~d~~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~p~~~~ll~~~~g---------------s~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 237 NDNVVQIWDARSSIPKFTKTNH----NAAVKAVAWCPWQSNLLATGGG---------------TMDKQIHFWNAATGARV 297 (401)
T ss_dssp TTSCEEEEETTCSSEEEEECCC----SSCCCEEEECTTSTTEEEEECC---------------TTTCEEEEEETTTCCEE
T ss_pred CCCeEEEccCCCCCccEEecCC----cceEEEEEECCCCCCEEEEecC---------------CCCCEEEEEECCCCCEE
Confidence 4556889998876543322111 2357889999976 56666532 12578999999888765
Q ss_pred EeccCCCCcceEEEccCCCEEEEEe-CCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCC
Q 016318 229 VLLRNLQFPNGLSLSKDKSFFVFCE-GSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 229 ~~~~~~~~~ngia~~~d~~~l~v~e-t~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
.........+.++++++++.++++. ...+.|..+++..........+....+....++++++|.+.++....
T Consensus 298 ~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 298 NTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD 370 (401)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT
T ss_pred EEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC
Confidence 5554445678999999999777653 35678888886542111111111223456678999999866665544
No 182
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.48 E-value=1.7e-05 Score=73.98 Aligned_cols=188 Identities=9% Similarity=-0.045 Sum_probs=113.6
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
...++++.++|+.++++..+|.|..|+.. ........ ......+..+++++++..|++
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------------------~~~~~~v~~~~~~~~~~~l~~ 113 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI--------------------LRINRAARCVRWAPNEKKFAV 113 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC--------------------CCCSSCEEEEEECTTSSEEEE
T ss_pred cccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEe--------------------ecCCCceeEEEECCCCCEEEE
Confidence 45688999999989999999999988764 21111110 111345678999984444566
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC----
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT---- 223 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~---- 223 (391)
+.....+..+|.+++................+..+++.++|+++++.+. +|.+..||..
T Consensus 114 ~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 114 GSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC-----------------DFKCRIFSAYIKEV 176 (372)
T ss_dssp EETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET-----------------TSCEEEEECCCTTT
T ss_pred EeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC-----------------CCCEEEEEcccccc
Confidence 6554557776666554111111111111235778899999987776533 4778888842
Q ss_pred --------------CCeE-EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeC
Q 016318 224 --------------TKQT-TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTN 288 (391)
Q Consensus 224 --------------~~~~-~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d 288 (391)
+++. ..+.......+.++++|+++.++.+ ...+.|..+++...+ ....+....+....++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV-SHDSTVCLADADKKM--AVATLASETLPLLAVTFI 253 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE-ETTTEEEEEEGGGTT--EEEEEECSSCCEEEEEEE
T ss_pred cccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE-eCCCEEEEEECCCCc--eeEEEccCCCCeEEEEEe
Confidence 3333 3333333457789999999966666 556788888875421 122222222234668888
Q ss_pred CCCCEEEEE
Q 016318 289 EKGEFWVAI 297 (391)
Q Consensus 289 ~~G~lwva~ 297 (391)
++|.+.++.
T Consensus 254 ~~~~~l~~~ 262 (372)
T 1k8k_C 254 TESSLVAAG 262 (372)
T ss_dssp ETTEEEEEE
T ss_pred cCCCEEEEE
Confidence 888866655
No 183
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.48 E-value=5.5e-05 Score=77.59 Aligned_cols=202 Identities=13% Similarity=0.002 Sum_probs=111.0
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..+.++++++|+. +.++ .++.|+.++...-....... ..+.+..+++++ +|+.++.
T Consensus 82 ~~v~~~~~spd~~-~~~~-~~~~i~~~d~~~~~~~~l~~---------------------~~~~~~~~~~Sp-dG~~la~ 137 (706)
T 2z3z_A 82 FPSFRTLDAGRGL-VVLF-TQGGLVGFDMLARKVTYLFD---------------------TNEETASLDFSP-VGDRVAY 137 (706)
T ss_dssp CCCEEEEETTTTE-EEEE-ETTEEEEEETTTTEEEEEEC---------------------CTTCCTTCEECT-TSSEEEE
T ss_pred cCceeEEECCCCe-EEEE-ECCEEEEEECCCCceEEccC---------------------CcccccCCcCCC-CCCEEEE
Confidence 4678999999954 4443 46899999876211111110 013345678888 5553333
Q ss_pred ECCCCeEEEeCCC-----CeeEEceeccCC----------CcccCCcceeecCCCC-EEEEeC--CCc--ccch------
Q 016318 149 DAYFGLMKVGPEG-----GLATSLATEAEG----------VPLRFTNDLDIDDEGN-VYFTDS--STN--YQRR------ 202 (391)
Q Consensus 149 d~~~gl~~~d~~~-----g~~~~~~~~~~~----------~~~~~~~~l~~d~~G~-ly~td~--~~~--~~~~------ 202 (391)
.....|+.++..+ ++...+...... .....+.+++.++||+ |+++.. +.. +...
T Consensus 138 ~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 138 VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSS
T ss_pred EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCC
Confidence 3345699999887 766554322111 0112357899999996 444431 000 0000
Q ss_pred ----hheee-ecccCCCceEEEEeCCCCeEEEeccC---CCCcceEEEccCCCEEEEEeCCC----CeEEEEEeccccCc
Q 016318 203 ----NFMQL-VFSAEDTGRVLKYDPTTKQTTVLLRN---LQFPNGLSLSKDKSFFVFCEGSV----GRLHKYWLIGEKAG 270 (391)
Q Consensus 203 ----~~~~~-~~~~~~~g~l~~~d~~~~~~~~~~~~---~~~~ngia~~~d~~~l~v~et~~----~~I~~~~~~g~~~g 270 (391)
...+. .-+......|+.+|.++++...+... -.....++++|||+.|+++.... ..|+.+++.+.+
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-- 295 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-- 295 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--
Confidence 00000 00112346799999999887665432 13456899999999888764332 378888765421
Q ss_pred cceeec-c-cCC---CCCceEeCC--CCCEEEE
Q 016318 271 NLEAFA-I-LPG---YPDNVRTNE--KGEFWVA 296 (391)
Q Consensus 271 ~~~~~~-~-~~g---~p~~i~~d~--~G~lwva 296 (391)
....+. . ... ....+++++ +|++.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~ 328 (706)
T 2z3z_A 296 FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ 328 (706)
T ss_dssp EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred eeeEEEEccCCCeECccCCceeecCCCCEEEEE
Confidence 222222 1 111 125678888 8984443
No 184
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.48 E-value=6.7e-05 Score=70.78 Aligned_cols=244 Identities=14% Similarity=0.048 Sum_probs=125.5
Q ss_pred CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCeEEE
Q 016318 79 LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLMKV 157 (391)
Q Consensus 79 ~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl~~~ 157 (391)
+| .+|+++.++.|+.++.. .-......... .....| .++ ++.+|++....+|+.+
T Consensus 103 ~~-~v~v~~~~g~l~a~d~~tG~~~W~~~~~~------------------~~~~~p---~~~--~~~v~v~~~~g~l~~~ 158 (376)
T 3q7m_A 103 GG-HVYIGSEKAQVYALNTSDGTVAWQTKVAG------------------EALSRP---VVS--DGLVLIHTSNGQLQAL 158 (376)
T ss_dssp TT-EEEEEETTSEEEEEETTTCCEEEEEECSS------------------CCCSCC---EEE--TTEEEEECTTSEEEEE
T ss_pred CC-EEEEEcCCCEEEEEECCCCCEEEEEeCCC------------------ceEcCC---EEE--CCEEEEEcCCCeEEEE
Confidence 44 49999999999999976 21111111000 001222 233 6789998766679999
Q ss_pred eCCCCeeEEceeccCC-CcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccCCCC
Q 016318 158 GPEGGLATSLATEAEG-VPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQF 236 (391)
Q Consensus 158 d~~~g~~~~~~~~~~~-~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~ 236 (391)
|+.+|+..-....... .........+++ +|.+|++.. +|+|+.+|+++|+..--... ..
T Consensus 159 d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~------------------~g~l~~~d~~tG~~~w~~~~-~~ 218 (376)
T 3q7m_A 159 NEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGD------------------NGRVSAVLMEQGQMIWQQRI-SQ 218 (376)
T ss_dssp ETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCT------------------TTEEEEEETTTCCEEEEEEC-CC
T ss_pred ECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcC------------------CCEEEEEECCCCcEEEEEec-cc
Confidence 9988864422111110 001111223333 678888753 37899999988876432211 11
Q ss_pred c-------------ceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCch
Q 016318 237 P-------------NGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 237 ~-------------ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
+ ....+ ++..+|++ +.++.++.++.+. |+.......+ .+..+..+ ++++|++...+.-.
T Consensus 219 ~~~~~~~~~~~~~~~~p~~--~~~~v~~~-~~~g~l~~~d~~t---G~~~w~~~~~-~~~~~~~~-~~~l~~~~~~g~l~ 290 (376)
T 3q7m_A 219 ATGSTEIDRLSDVDTTPVV--VNGVVFAL-AYNGNLTALDLRS---GQIMWKRELG-SVNDFIVD-GNRIYLVDQNDRVM 290 (376)
T ss_dssp -----------CCCCCCEE--ETTEEEEE-CTTSCEEEEETTT---CCEEEEECCC-CEEEEEEE-TTEEEEEETTCCEE
T ss_pred CCCCcccccccccCCCcEE--ECCEEEEE-ecCcEEEEEECCC---CcEEeeccCC-CCCCceEE-CCEEEEEcCCCeEE
Confidence 1 11122 23448877 4567899998642 2222111121 22334454 66788887643221
Q ss_pred hhhhhhcCccceeeeeecCc-cce-------eeeEEeecCccceEEEEEC-CCCCEEEEEeCCCCCeeeceeEEEEECCE
Q 016318 304 YSHLMALYPKIRHFLLKLPI-SAK-------THYLIHVGGRLHAMAVKYS-PEGKILQVLEDSKGKVVKAISEVEEKDGK 374 (391)
Q Consensus 304 ~~~~l~~~~~~~~~~~~l~~-~~~-------~~~~~~~~~~~~~~v~~~d-~~g~~~~~~~~~~g~~~~~is~~~~~~g~ 374 (391)
+-.+..++.+.+.+. ... ....++++ ...+.+.++| .+|+.+..+....+.. .+.....+|+
T Consensus 291 -----~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~-~~~g~l~~~d~~tG~~~~~~~~~~~~~---~~~~~~~~~~ 361 (376)
T 3q7m_A 291 -----ALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVG-DSEGYLHWINVEDGRFVAQQKVDSSGF---QTEPVAADGK 361 (376)
T ss_dssp -----EEETTTCCEEEEECTTTTSCCCCCEEETTEEEEE-CTTSEEEEEETTTCCEEEEEECCTTCB---CSCCEEETTE
T ss_pred -----EEECCCCcEEEeecccCCCcccCCEEECCEEEEE-eCCCeEEEEECCCCcEEEEEecCCCcc---eeCCEEECCE
Confidence 113334555554431 110 00112222 2345677777 4677766655423222 2334456899
Q ss_pred EEEecCCCC
Q 016318 375 LWMGSVLMP 383 (391)
Q Consensus 375 Lylgs~~~~ 383 (391)
||+++....
T Consensus 362 l~v~~~~G~ 370 (376)
T 3q7m_A 362 LLIQAKDGT 370 (376)
T ss_dssp EEEEBTTSC
T ss_pred EEEEeCCCE
Confidence 999987654
No 185
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.48 E-value=0.00014 Score=68.42 Aligned_cols=204 Identities=11% Similarity=0.072 Sum_probs=117.3
Q ss_pred cCcceEEEcc-CCCeeEEEecCCEEEEEeCCc---eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 69 QGPESMAFDP-LGRGPYTGVADGRILFWDGLK---WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 69 ~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
..-.++++.+ +|+.++++..+|.|..|+... ...+.... .+... ........+....+++.+++++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA-----VCSIG-----RDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE-----EEEEC-----TTCTTCCSSCEEEEEECTTCTT
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc-----ccccc-----ccccccCCCcEEEEEEccCCCc
Confidence 3556899999 999999999999999998761 11110000 00000 0000112355678999874444
Q ss_pred -EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC---CCCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 145 -LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD---EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 145 -L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~---~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
|+.+.....|..+|..+++....... . .....+...+ ++.+.++... +|.+..|
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~ 171 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNF-E----ETVYSHHMSPVSTKHCLVAVGTR-----------------GPKVQLC 171 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEEC-S----SCEEEEEECSSCSSCCEEEEEES-----------------SSSEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccC-C----CceeeeEeecCCCCCcEEEEEcC-----------------CCeEEEE
Confidence 45554444588899988765443321 1 1234555554 4445555432 5789999
Q ss_pred eCCCCeEEE-eccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceee---------------cccCCCCCc
Q 016318 221 DPTTKQTTV-LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAF---------------AILPGYPDN 284 (391)
Q Consensus 221 d~~~~~~~~-~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~---------------~~~~g~p~~ 284 (391)
|..+++... +.........++++|+++.++++....+.|..+++.... .....+ ....+....
T Consensus 172 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 172 DLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS-GCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp ESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS-CCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred eCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC-cccccccccccccceeeccccccccCceeE
Confidence 988775433 333334567899999998655555667788888875321 011111 011123456
Q ss_pred eEeCCCCCEEEEEcCCCchhh
Q 016318 285 VRTNEKGEFWVAIHCRRSLYS 305 (391)
Q Consensus 285 i~~d~~G~lwva~~~~~~~~~ 305 (391)
++++++|++.++......+..
T Consensus 251 ~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 251 LCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp EEECTTSSEEEEEETTSCEEE
T ss_pred EEEcCCCCEEEEecCCCeEEE
Confidence 888999986666554444433
No 186
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.48 E-value=9.9e-05 Score=67.44 Aligned_cols=194 Identities=13% Similarity=0.022 Sum_probs=109.7
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCC-c---eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-CC
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL-K---WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TG 143 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~-~g 143 (391)
..-.+++++++|+.++++..+|.|..|+.. . ....... ....+....+++.+. ++
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--------------------~~~~~~v~~~~~~~~~d~ 71 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSW--------------------RAHDSSIVAIDWASPEYG 71 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEE--------------------ECCSSCEEEEEECCGGGC
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceeccee--------------------ccCCCcEEEEEEcCCCCC
Confidence 456689999999999999999999999765 1 1111111 112345678888863 24
Q ss_pred c-EEEEECCCCeEEEeCCCCee-------EEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeeecccCC
Q 016318 144 D-LYIADAYFGLMKVGPEGGLA-------TSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 144 ~-L~V~d~~~gl~~~d~~~g~~-------~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
+ |..+.....|..+|..+++. +.+... .+ .......+++.++ +++.++.+.
T Consensus 72 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~l~~~~~----------------- 132 (351)
T 3f3f_A 72 RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL-ND-SKGSLYSVKFAPAHLGLKLACLGN----------------- 132 (351)
T ss_dssp SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEET-----------------
T ss_pred CEEEEEcCCCeEEEEecCCCcccccccCcceeeee-cc-cCCceeEEEEcCCCCCcEEEEecC-----------------
Confidence 4 44454444477888776531 111111 11 1235678889888 876666533
Q ss_pred CceEEEEeCCCCeEEEe------c--------cCCCCcceEEEccC---CCEEEEEeCCCCeEEEEEeccccCccceeec
Q 016318 214 TGRVLKYDPTTKQTTVL------L--------RNLQFPNGLSLSKD---KSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA 276 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~------~--------~~~~~~ngia~~~d---~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~ 276 (391)
+|.|..||..+++.... . ........++++|+ ++.+.++. ..+.+ .++... .++.....
T Consensus 133 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~-~~~~~-~~~~~~--~~~~~~~~ 208 (351)
T 3f3f_A 133 DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA-LEQAI-IYQRGK--DGKLHVAA 208 (351)
T ss_dssp TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE-TTEEE-EEEECT--TSCEEEEE
T ss_pred CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec-CCCcE-EEEccC--CCceeeee
Confidence 57888898766542110 0 12234567889987 77666654 34444 443221 12222222
Q ss_pred ccC---CCCCceEeCCCC----CEEEEEcCCCchhh
Q 016318 277 ILP---GYPDNVRTNEKG----EFWVAIHCRRSLYS 305 (391)
Q Consensus 277 ~~~---g~p~~i~~d~~G----~lwva~~~~~~~~~ 305 (391)
.+. +....++++++| +++++......+..
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 222 334567888887 55555544444433
No 187
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.47 E-value=1.5e-05 Score=75.39 Aligned_cols=193 Identities=10% Similarity=0.026 Sum_probs=117.1
Q ss_pred cceEEEccCCCeeEEEe--cCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 71 PESMAFDPLGRGPYTGV--ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~--~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
...+++.|||+.+.+++ .|+.|..|+.......... + ..+...+++|++ +|++++.
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~--------------------~-~~~~V~~v~fsp-dg~~l~s 193 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI--------------------E-TRGEVKDLHFST-DGKVVAY 193 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE--------------------E-CSSCCCEEEECT-TSSEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe--------------------C-CCCceEEEEEcc-CCceEEe
Confidence 34799999999776655 5788888888732222211 1 124567899999 7787776
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
....++.+++..++......... ......+.+++.++|...++.+.. ......+..++.......
T Consensus 194 ~s~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~v~fspdg~~l~~~s~d-------------~~~~~~i~~~~~~~~~~~ 258 (365)
T 4h5i_A 194 ITGSSLEVISTVTGSCIARKTDF--DKNWSLSKINFIADDTVLIAASLK-------------KGKGIVLTKISIKSGNTS 258 (365)
T ss_dssp ECSSCEEEEETTTCCEEEEECCC--CTTEEEEEEEEEETTEEEEEEEES-------------SSCCEEEEEEEEETTEEE
T ss_pred ccceeEEEEEeccCcceeeeecC--CCCCCEEEEEEcCCCCEEEEEecC-------------CcceeEEeecccccceec
Confidence 66777888888776543221111 112346788999999877765320 011123556665544432
Q ss_pred E-----eccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc-cCCCCCceEeCCCCCEEEEEcCCCc
Q 016318 229 V-----LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 229 ~-----~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~~G~lwva~~~~~~ 302 (391)
. +.......+.++++|||++|..+ +..+.|..+++... .....+.. -.+....++++++|++.++......
T Consensus 259 ~~~~~~~~~~~~~V~~~~~Spdg~~lasg-s~D~~V~iwd~~~~--~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 259 VLRSKQVTNRFKGITSMDVDMKGELAVLA-SNDNSIALVKLKDL--SMSKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp EEEEEEEESSCSCEEEEEECTTSCEEEEE-ETTSCEEEEETTTT--EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred ceeeeeecCCCCCeEeEEECCCCCceEEE-cCCCEEEEEECCCC--cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 2 22333456789999999966555 55677888876431 11122211 1234567899999998877665544
Q ss_pred h
Q 016318 303 L 303 (391)
Q Consensus 303 ~ 303 (391)
+
T Consensus 336 v 336 (365)
T 4h5i_A 336 I 336 (365)
T ss_dssp E
T ss_pred E
Confidence 4
No 188
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.47 E-value=4.3e-05 Score=70.88 Aligned_cols=193 Identities=8% Similarity=-0.045 Sum_probs=112.5
Q ss_pred CcceEEEccC----CCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-
Q 016318 70 GPESMAFDPL----GRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD- 144 (391)
Q Consensus 70 gPe~i~~d~~----G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~- 144 (391)
...++++.++ |+.++++..+|.|..|+........... ...+...++++++++++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--------------------~~~~~i~~~~~~~~~~~~ 130 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV--------------------GHGNAINELKFHPRDPNL 130 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE--------------------SCCSCEEEEEECSSCTTE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec--------------------CCCCcEEEEEECCCCCCE
Confidence 3567888888 6689999999999999876222221111 11345678899873344
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
|+.+.....|..+|..+++.........+ ....+..++++++|+..++.+. +|.+..||..+
T Consensus 131 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~ 192 (366)
T 3k26_A 131 LLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLLGEKIMSCGM-----------------DHSLKLWRINS 192 (366)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESCS
T ss_pred EEEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCCCCEEEEecC-----------------CCCEEEEECCC
Confidence 55555455599999987764433211111 1235788899999987776533 46788888776
Q ss_pred CeEEEec-----------------------------cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccC------
Q 016318 225 KQTTVLL-----------------------------RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA------ 269 (391)
Q Consensus 225 ~~~~~~~-----------------------------~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~------ 269 (391)
++..... ......+.++++ ++.+ ++....+.|..+++.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~ 269 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLI-LSKSCENAIVCWKPGKMEDDIDKIK 269 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEE-EEECSSSEEEEEEESSTTCCGGGCC
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEE-EEEecCCEEEEEeCCCccccccccc
Confidence 5422110 022344567776 6644 4446678888888754311
Q ss_pred ---ccceeeccc---CCCCCceEeCCC--CCEEEEEcCCCch
Q 016318 270 ---GNLEAFAIL---PGYPDNVRTNEK--GEFWVAIHCRRSL 303 (391)
Q Consensus 270 ---g~~~~~~~~---~g~p~~i~~d~~--G~lwva~~~~~~~ 303 (391)
........+ .+....++++++ |++.++......+
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i 311 (366)
T 3k26_A 270 PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL 311 (366)
T ss_dssp TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCE
T ss_pred cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcE
Confidence 000111111 223455666666 8876665554443
No 189
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.47 E-value=1.7e-05 Score=81.77 Aligned_cols=203 Identities=10% Similarity=0.057 Sum_probs=114.0
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEEEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIAD 149 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V~d 149 (391)
..++++++||+.++++.. +.|+.++...-. . ..+. ......+.+..+++++ +|+ |..+.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~-------~--~~~~---------~l~~~~~~~~~~~~SP-DG~~la~~~ 170 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEG-------K--AAVR---------QLTHGEGFATDAKLSP-KGGFVSFIR 170 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCS-------T--TSCC---------BCCCSSSCEEEEEECT-TSSEEEEEE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCC-------c--ceEE---------EcccCCcccccccCCC-CCCEEEEEe
Confidence 578899999997777665 889988765210 0 0000 1111134567889999 565 44443
Q ss_pred CCCCeEEEeCCCCeeEEceeccCCC------------cccCCcceeecCCCC-EEEEeCCC-cccc-------------h
Q 016318 150 AYFGLMKVGPEGGLATSLATEAEGV------------PLRFTNDLDIDDEGN-VYFTDSST-NYQR-------------R 202 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~~~~------------~~~~~~~l~~d~~G~-ly~td~~~-~~~~-------------~ 202 (391)
...|+.+|.++++...+....... .+..+.+++.++||+ |+++.... .... .
T Consensus 171 -~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 171 -GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp -TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred -CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccce
Confidence 456999999988776654321110 011257789999996 66653210 0000 0
Q ss_pred hheee-ecccCCCceEEEEeCCC-CeEEEeccC---CCCcceEEEccCCCEEEEEeC----CCCeEEEEEeccccCccce
Q 016318 203 NFMQL-VFSAEDTGRVLKYDPTT-KQTTVLLRN---LQFPNGLSLSKDKSFFVFCEG----SVGRLHKYWLIGEKAGNLE 273 (391)
Q Consensus 203 ~~~~~-~~~~~~~g~l~~~d~~~-~~~~~~~~~---~~~~ngia~~~d~~~l~v~et----~~~~I~~~~~~g~~~g~~~ 273 (391)
...+. .-+..+...|+.+|.++ ++...+... ......+++ |||+.|+++.. ....|+.+++.+ ++..
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~---g~~~ 325 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS---NQQR 325 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT---CCEE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC---CceE
Confidence 00000 00011223788899988 876665422 234568899 99998887643 234677777654 2222
Q ss_pred eec-c-cCC---CCCceEeCCCCCEEEEEc
Q 016318 274 AFA-I-LPG---YPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 274 ~~~-~-~~g---~p~~i~~d~~G~lwva~~ 298 (391)
... . ..+ ....++++++|+++++..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 355 (741)
T 2ecf_A 326 VLAHETSPTWVPLHNSLRFLDDGSILWSSE 355 (741)
T ss_dssp EEEEEECSSCCCCCSCCEECTTSCEEEEEC
T ss_pred EEEEcCCCCcCCcCCceEECCCCeEEEEec
Confidence 222 1 112 235788999998554433
No 190
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.46 E-value=0.00029 Score=65.47 Aligned_cols=185 Identities=12% Similarity=0.033 Sum_probs=109.2
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V~ 148 (391)
.-.++++.+++..+++++.|+.|..|+......+.... ...+...++++++ +++ |..+
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~--------------------~h~~~v~~v~~sp-~~~~l~s~ 136 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV--------------------GHQSEVYSVAFSP-DNRQILSA 136 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE--------------------CCCSCEEEEEECS-STTEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc--------------------CCCCcEEEEEECC-CCCEEEEE
Confidence 44678999999988999999999999876222221111 1124467899998 555 5555
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCC----------CEEEEeCCCcccchhheeeecccCCCceEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG----------NVYFTDSSTNYQRRNFMQLVFSAEDTGRVL 218 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G----------~ly~td~~~~~~~~~~~~~~~~~~~~g~l~ 218 (391)
.....|..+|..+......... . ........+++.+++ .++++.+ .+|.|.
T Consensus 137 ~~d~~i~~wd~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~ 197 (343)
T 2xzm_R 137 GAEREIKLWNILGECKFSSAEK-E-NHSDWVSCVRYSPIMKSANKVQPFAPYFASVG-----------------WDGRLK 197 (343)
T ss_dssp ETTSCEEEEESSSCEEEECCTT-T-SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE-----------------TTSEEE
T ss_pred cCCCEEEEEeccCCceeeeecc-c-CCCceeeeeeeccccccccccCCCCCEEEEEc-----------------CCCEEE
Confidence 5455588888775433222111 0 111234566666654 4444432 257888
Q ss_pred EEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEE
Q 016318 219 KYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAI 297 (391)
Q Consensus 219 ~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~ 297 (391)
.||........+...-...+.++++||+++|..+ ...+.|..+++..... ....+. .......+++++++.+.++.
T Consensus 198 iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sg-s~dg~v~iwd~~~~~~-~~~~~~-~~~~v~~v~~sp~~~~la~~ 273 (343)
T 2xzm_R 198 VWNTNFQIRYTFKAHESNVNHLSISPNGKYIATG-GKDKKLLIWDILNLTY-PQREFD-AGSTINQIAFNPKLQWVAVG 273 (343)
T ss_dssp EEETTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTCEEEEEESSCCSS-CSEEEE-CSSCEEEEEECSSSCEEEEE
T ss_pred EEcCCCceeEEEcCccccceEEEECCCCCEEEEE-cCCCeEEEEECCCCcc-cceeec-CCCcEEEEEECCCCCEEEEE
Confidence 8995543333343334466789999999966554 5567888887632211 111121 12234678889998765443
No 191
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.44 E-value=3.1e-05 Score=71.67 Aligned_cols=195 Identities=10% Similarity=0.025 Sum_probs=113.8
Q ss_pred CcceEEEccC---CCeeEEEecCCEEEEEeCCcee-EEEeecCCCcccCCCCCCccccccccCccCccceEE------Ee
Q 016318 70 GPESMAFDPL---GRGPYTGVADGRILFWDGLKWT-DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR------FD 139 (391)
Q Consensus 70 gPe~i~~d~~---G~~ly~~~~~g~I~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~------~d 139 (391)
...++++.++ |+.++++..+|.|..|+..... ...... ...+....+. ++
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~s 126 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK--------------------GHKEIINAIDGIGGLGIG 126 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEEC--------------------CCSSCEEEEEEESGGGCC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEE--------------------ecccceEEEeeccccccC
Confidence 4567888888 6889999999999999876211 111110 0122334453 35
Q ss_pred cCCCcEEEEECCCCeEEEeCCCCe--eEEceeccCCCcccCCccee----ecCCCCEEEEeCCCcccchhheeeecccCC
Q 016318 140 KKTGDLYIADAYFGLMKVGPEGGL--ATSLATEAEGVPLRFTNDLD----IDDEGNVYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 140 ~~~g~L~V~d~~~gl~~~d~~~g~--~~~~~~~~~~~~~~~~~~l~----~d~~G~ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
+++..|+.+.....|..+|..+++ +..+. ...+........++ +.+++++.++.+.
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----------------- 188 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQKDDPVANME-PVQGENKRDCWTVAFGNAYNQEERVVCAGYD----------------- 188 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSCSSCSEEEC-CCTTSCCCCEEEEEEECCCC-CCCEEEEEET-----------------
T ss_pred CCccEEEEEeCCCeEEEEeCCCCCCcceecc-ccCCCCCCceEEEEEEeccCCCCCEEEEEcc-----------------
Confidence 523345555544558888987764 22221 22222122445555 5678877766533
Q ss_pred CceEEEEeCCCCeEEEeccCCCCcceEEEcc---CCCEEEEEeCCCCeEEEEEeccccCc-ccee--ecccCCCCCceEe
Q 016318 214 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSK---DKSFFVFCEGSVGRLHKYWLIGEKAG-NLEA--FAILPGYPDNVRT 287 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~---d~~~l~v~et~~~~I~~~~~~g~~~g-~~~~--~~~~~g~p~~i~~ 287 (391)
+|.+..||..+++...........+.++++| +++.++++ +..+.|..+++...+.- .... +....+....+++
T Consensus 189 d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~ 267 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRH 267 (357)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEE
T ss_pred CCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEE
Confidence 5789999999888765544445678999999 89877666 55678888887643211 1110 1112233456788
Q ss_pred CCCCC-EEEEEcCCCch
Q 016318 288 NEKGE-FWVAIHCRRSL 303 (391)
Q Consensus 288 d~~G~-lwva~~~~~~~ 303 (391)
+++|. ++++......+
T Consensus 268 ~~~~~~~l~~~~~dg~i 284 (357)
T 3i2n_A 268 LPQNRELFLTAGGAGGL 284 (357)
T ss_dssp ETTEEEEEEEEETTSEE
T ss_pred CCCCCcEEEEEeCCCcE
Confidence 88887 45444444333
No 192
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.41 E-value=4e-05 Score=76.25 Aligned_cols=187 Identities=10% Similarity=-0.060 Sum_probs=118.3
Q ss_pred ccCcceEEE-c-cCCCeeEEEe------------------cCCEEEEEeCCceeEEEeecCCCcccCCCCCCcccccccc
Q 016318 68 IQGPESMAF-D-PLGRGPYTGV------------------ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNE 127 (391)
Q Consensus 68 ~~gPe~i~~-d-~~G~~ly~~~------------------~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (391)
..+|+++++ . ++++.+|++. .++.+-.+|.+..+.... .
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~q---------------------I 191 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQ---------------------V 191 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEE---------------------E
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEE---------------------E
Confidence 368999998 4 8999888884 234566666653222211 1
Q ss_pred CccCccceEEEecCCCcEEEEECCC--------------------------------------CeEEEeCCC--Cee--E
Q 016318 128 HICGRPLGLRFDKKTGDLYIADAYF--------------------------------------GLMKVGPEG--GLA--T 165 (391)
Q Consensus 128 ~~~g~P~gi~~d~~~g~L~V~d~~~--------------------------------------gl~~~d~~~--g~~--~ 165 (391)
...++|.+++++++++.+|+++... ++.++|..+ ++. .
T Consensus 192 ~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~ 271 (595)
T 1fwx_A 192 LVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTR 271 (595)
T ss_dssp EESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEE
T ss_pred EeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEE
Confidence 1245788999988666678876432 355555554 211 1
Q ss_pred EceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe------------EEEecc
Q 016318 166 SLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ------------TTVLLR 232 (391)
Q Consensus 166 ~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~------------~~~~~~ 232 (391)
.+. -...|.++.+++||+ +|+++-. +..+..||.++.+ +..-..
T Consensus 272 ~Ip------vg~~PhGv~~sPDGk~v~V~~~~-----------------s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 272 YIP------IANNPHGCNMAPDKKHLCVAGKL-----------------SPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp EEE------EESSCCCEEECTTSSEEEEECTT-----------------SSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred EEe------cCCCceEEEEcCCCCEEEEeCCC-----------------CCeEEEEECcccccccccccCcccceEEEcC
Confidence 110 014789999999996 7777633 5788888877542 222223
Q ss_pred CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecccc---C--ccceeecccC-----C---CCCceEeCCCCCEEEEEcC
Q 016318 233 NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK---A--GNLEAFAILP-----G---YPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 233 ~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~---~--g~~~~~~~~~-----g---~p~~i~~d~~G~lwva~~~ 299 (391)
....|.++++++|| .+|++....+.|.+++++... . ...++...++ | ...+++.++||++.++.+.
T Consensus 329 vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 329 LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 34689999999999 799999889999999976410 0 1122332222 2 1256778999996666554
No 193
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.41 E-value=6.7e-05 Score=70.37 Aligned_cols=186 Identities=11% Similarity=0.063 Sum_probs=115.5
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-CCc-EEEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGD-LYIA 148 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~-~g~-L~V~ 148 (391)
-.++++.++++.+++++.|+.|..|+........... ........+.+.+. +++ |+.+
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~--------------------~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH--------------------GHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECCCSSCCEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc--------------------CCCCCeEEEEEEeCCCCCEEEEE
Confidence 3578888999889999999999999876222211110 01233456666542 344 5555
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
.....|..+|..+++........ ....+.+++.++|++.++.+. ++.+..||..+++..
T Consensus 217 s~Dg~v~~wd~~~~~~~~~~~~h----~~~v~~v~~~p~~~~l~s~s~-----------------D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 217 GCDKKAMVWDMRSGQCVQAFETH----ESDVNSVRYYPSGDAFASGSD-----------------DATCRLYDLRADREV 275 (354)
T ss_dssp ETTSCEEEEETTTCCEEEEECCC----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCC----CCCeEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCcEE
Confidence 54555999998877643322111 135788999999988777643 578888998776544
Q ss_pred EeccC---CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCC
Q 016318 229 VLLRN---LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 229 ~~~~~---~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
..... ......++++|++++++.+ ...+.|..+++... .....+....+....++++++|.+.++....
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~l~~g-~~d~~i~vwd~~~~--~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRLLFAG-YNDYTINVWDVLKG--SRVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTC--SEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEcCCCcccceeEEEEeCCCCEEEEE-ECCCcEEEEECCCC--ceEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 33322 1245689999999966655 55678888876421 1122222222344568899999876655443
No 194
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.40 E-value=6.6e-05 Score=72.34 Aligned_cols=210 Identities=12% Similarity=0.085 Sum_probs=121.5
Q ss_pred cCcceEEEccC-CCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EE
Q 016318 69 QGPESMAFDPL-GRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LY 146 (391)
Q Consensus 69 ~gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~ 146 (391)
..+.++++.++ ++++++++.+|.|..|+...... .......+.. ..........+.++++++ .+. ++
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~----~~~~~~~~~~------~~~~~~h~~~v~~l~~~~-~~~~~l 197 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPS----KPEPSGECQP------DLRLRGHQKEGYGLSWNP-NLNGYL 197 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCS----SCCTTCCCCC------SEEEECCSSCCCCEEECT-TSTTEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCccc----ccCccccCCC------cEEecCCCCCeEEEEeCC-CCCCeE
Confidence 36778999987 67788899999999887541000 0000000000 001111234568899998 444 55
Q ss_pred EEECC-CCeEEEeCCCCee--EEc--eeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 147 IADAY-FGLMKVGPEGGLA--TSL--ATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 147 V~d~~-~gl~~~d~~~g~~--~~~--~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
++... ..|..++..++.. ..+ .....+ ....+.++++.+ +++++++.+. +|.|..|
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~-----------------dg~i~i~ 259 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVAD-----------------DQKLMIW 259 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEE
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeC-----------------CCeEEEE
Confidence 54444 4488888876321 000 011111 123577889988 5677777643 5789999
Q ss_pred eCCCC----eEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEE
Q 016318 221 DPTTK----QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWV 295 (391)
Q Consensus 221 d~~~~----~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwv 295 (391)
|..++ ....+...-..++.++++|+++.++++....+.|..+++.... .....+....+....++++++|. +++
T Consensus 260 d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 260 DTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp ETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred ECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEEE
Confidence 98765 2233333345678999999998666665667889998876421 11223322234456788999885 566
Q ss_pred EEcCCCchhhhhh
Q 016318 296 AIHCRRSLYSHLM 308 (391)
Q Consensus 296 a~~~~~~~~~~~l 308 (391)
+....+.+.++.+
T Consensus 339 s~~~d~~i~iwd~ 351 (430)
T 2xyi_A 339 SSGTDRRLHVWDL 351 (430)
T ss_dssp EEETTSCCEEEEG
T ss_pred EEeCCCcEEEEeC
Confidence 5555544444333
No 195
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.39 E-value=7.6e-05 Score=72.29 Aligned_cols=159 Identities=9% Similarity=0.069 Sum_probs=98.9
Q ss_pred CcceEEEccCCCee-EEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 70 GPESMAFDPLGRGP-YTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 70 gPe~i~~d~~G~~l-y~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
...+++++++|+.+ +++..+|.|..|+.. ......... .......+.++++++++..|+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~------------------~~~~~~~v~~~~~sp~~~~l~ 165 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK------------------RFCFSKRPNAISIAEDDTTVI 165 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE------------------EEECSSCEEEEEECTTSSEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee------------------cccCCCCceEEEEcCCCCEEE
Confidence 45789999999975 678889988888643 111111000 000125577899998444566
Q ss_pred EEECCCCeEEEeCCCCeeEE-ceeccCCCcccCCcceeecCC---CCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 147 IADAYFGLMKVGPEGGLATS-LATEAEGVPLRFTNDLDIDDE---GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~-~~~~~~~~~~~~~~~l~~d~~---G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
+++....++.++..++.... ......+ ....+..+++.++ |++.++.+. ++.|..||.
T Consensus 166 ~~~~~g~v~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~-----------------d~~i~vwd~ 227 (450)
T 2vdu_B 166 IADKFGDVYSIDINSIPEEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDR-----------------DEHIKISHY 227 (450)
T ss_dssp EEETTSEEEEEETTSCCCSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEET-----------------TSCEEEEEE
T ss_pred EEeCCCcEEEEecCCcccccccceeeec-ccCceEEEEEcCCCCCCcEEEEEcC-----------------CCcEEEEEC
Confidence 66654558889887654321 0001111 1135678889988 876666533 478888888
Q ss_pred CCCeEE-Eec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 223 TTKQTT-VLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 223 ~~~~~~-~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
.+++.. .+. ......+.++++ |+++++.+ ...+.|..+++..
T Consensus 228 ~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~-~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA-GGDDKIFAWDWKT 271 (450)
T ss_dssp SCTTCEEEECCCCSSCEEEEEEC-STTEEEEE-ESSSEEEEEETTT
T ss_pred CCCceeeeeecCCCCceEEEEEC-CCCEEEEE-eCCCeEEEEECCC
Confidence 776543 323 233467889999 99966655 5567888888654
No 196
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.39 E-value=0.00015 Score=73.40 Aligned_cols=102 Identities=18% Similarity=0.171 Sum_probs=61.5
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
...+++++++|+.+.+++.|+.|..|+............. ........++.++ +..+..+.
T Consensus 241 ~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~--~~~l~s~s 301 (611)
T 1nr0_A 241 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG-----------------TRIEDQQLGIIWT--KQALVSIS 301 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-----------------SSGGGCEEEEEEC--SSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCC-----------------CCccceeEEEEEc--CCEEEEEe
Confidence 4568999999999999999999999987622222111100 0001223455553 44555555
Q ss_pred CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEe
Q 016318 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTD 194 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td 194 (391)
....+..+++.+++........ ......+++.++|+..++.
T Consensus 302 ~d~~i~~~~~~~~~~~~~~~gh----~~~v~~l~~spdg~~l~s~ 342 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVRYGH----NKAITALSSSADGKTLFSA 342 (611)
T ss_dssp TTCCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEE
T ss_pred CCCcEEEEeCCCCCcceEEcCC----CCCEEEEEEeCCCCEEEEE
Confidence 5555888888877533221111 2346778888888766664
No 197
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.39 E-value=5.7e-05 Score=71.11 Aligned_cols=154 Identities=12% Similarity=0.032 Sum_probs=102.5
Q ss_pred CcceEEEcc-CCCeeEEEecCCEEEEEeCCc--eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 70 GPESMAFDP-LGRGPYTGVADGRILFWDGLK--WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 70 gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
...++++.+ +++.++++..++.|..|+... ...+... .........+++++++..|+
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--------------------~~~~~~v~~~~~~~~~~~l~ 179 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKT--------------------DSWDYWYCCVDVSVSRQMLA 179 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECC--------------------CCSSCCEEEEEEETTTTEEE
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEecc--------------------CCCCCCeEEEEECCCCCEEE
Confidence 456888988 678899999999999998762 2222110 00124467889998433455
Q ss_pred EEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCC-
Q 016318 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT- 224 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~- 224 (391)
+++....|..+|..+..+..+... ...+..+++.++|. ++++.+. ++.+..||..+
T Consensus 180 ~~~~d~~i~i~d~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~ 237 (383)
T 3ei3_B 180 TGDSTGRLLLLGLDGHEIFKEKLH-----KAKVTHAEFNPRCDWLMATSSV-----------------DATVKLWDLRNI 237 (383)
T ss_dssp EEETTSEEEEEETTSCEEEEEECS-----SSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEEGGGC
T ss_pred EECCCCCEEEEECCCCEEEEeccC-----CCcEEEEEECCCCCCEEEEEeC-----------------CCEEEEEeCCCC
Confidence 555445588889865555444321 13578899999987 6666533 57888898876
Q ss_pred ---CeEEEeccCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEecc
Q 016318 225 ---KQTTVLLRNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 225 ---~~~~~~~~~~~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g 266 (391)
++.............++++| +++.++.+ ...+.|..+++..
T Consensus 238 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~-~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 238 KDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT-DQRNEIRVYSSYD 282 (383)
T ss_dssp CSTTCEEEEEECSSCEEEEEECTTTSCEEEEE-ESSSEEEEEETTB
T ss_pred CcccceEEEecCCCceEEEEEcCCCCCEEEEE-cCCCcEEEEECCC
Confidence 44443334445678899999 99976655 5567899888764
No 198
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.38 E-value=0.0004 Score=65.94 Aligned_cols=209 Identities=13% Similarity=-0.012 Sum_probs=117.1
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE-E
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI-A 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V-~ 148 (391)
.-.++++.++|+.+.++. ++.+..|+...-...............+.... .............++|++ ++++++ +
T Consensus 66 ~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~v~~v~~s~-dg~~l~s~ 141 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLN--TSSSPSSDLYIRSVCFSP-DGKFLATG 141 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------------CCCCBEEEEEECT-TSSEEEEE
T ss_pred EEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcccccccccccc--ccccCCCceeEEEEEECC-CCCEEEEE
Confidence 346899999999666654 66787787652111111110000000000000 000000112356889998 565544 4
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
.....|..+|..+++......... .....+++.++|+..++.+. ++.+..||..+++..
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~p~~~~l~s~s~-----------------d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQGHE----QDIYSLDYFPSGDKLVSGSG-----------------DRTVRIWDLRTGQCS 200 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS----SCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEE
T ss_pred cCCCeEEEEECCCCcEEEEEccCC----CCEEEEEEcCCCCEEEEecC-----------------CCcEEEEECCCCeeE
Confidence 444558888998876543322211 24678899999987776643 578999999888765
Q ss_pred EeccCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEeccccCccceeec-------ccCCCCCceEeCCCCCEEEEEcCC
Q 016318 229 VLLRNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-------ILPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 229 ~~~~~~~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-------~~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
...........++++| +++.+..+ ...+.|..+++.... ....+. ...+....++++++|.+.++....
T Consensus 201 ~~~~~~~~v~~~~~~~~~~~~l~~~-s~d~~v~iwd~~~~~--~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 201 LTLSIEDGVTTVAVSPGDGKYIAAG-SLDRAVRVWDSETGF--LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp EEEECSSCEEEEEECSTTCCEEEEE-ETTSCEEEEETTTCC--EEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEcCCCcEEEEEECCCCCEEEEE-cCCCcEEEEECCCCc--EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 5444444567889998 78855544 556778888754321 111111 011223568889999877766555
Q ss_pred Cchhhh
Q 016318 301 RSLYSH 306 (391)
Q Consensus 301 ~~~~~~ 306 (391)
+.+.++
T Consensus 278 ~~v~~w 283 (393)
T 1erj_A 278 RSVKLW 283 (393)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 555443
No 199
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.38 E-value=8.7e-05 Score=69.93 Aligned_cols=193 Identities=15% Similarity=0.131 Sum_probs=115.3
Q ss_pred CcceEEEccC----C---CeeEEEecCCEEEEEeCC--c------eeEEEeecCCCcccCCCCCCccccccccCc--cCc
Q 016318 70 GPESMAFDPL----G---RGPYTGVADGRILFWDGL--K------WTDFAFTSNNRSELCNPKPIATSYLKNEHI--CGR 132 (391)
Q Consensus 70 gPe~i~~d~~----G---~~ly~~~~~g~I~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~ 132 (391)
...++++.++ | +.++++..+|.|..|+.. . +..+.. .... .+.
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 123 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDL--------------------LDSDMKKHS 123 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECC--------------------SCTTGGGSC
T ss_pred cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecc--------------------cccccCCCc
Confidence 4568889988 8 889999999999988754 1 111100 0000 255
Q ss_pred cceEEEe----cCCCc-EEEEECCCCeEEEeCCC------Ce-eE-----Ecee--ccCCCcccCCcceeecCCCCEEEE
Q 016318 133 PLGLRFD----KKTGD-LYIADAYFGLMKVGPEG------GL-AT-----SLAT--EAEGVPLRFTNDLDIDDEGNVYFT 193 (391)
Q Consensus 133 P~gi~~d----~~~g~-L~V~d~~~gl~~~d~~~------g~-~~-----~~~~--~~~~~~~~~~~~l~~d~~G~ly~t 193 (391)
...++++ +++.. |+++.....|..+|..+ ++ +. .+.. .........+..+++.++| ++++
T Consensus 124 v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~ 202 (397)
T 1sq9_A 124 FWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIAT 202 (397)
T ss_dssp EEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE
T ss_pred EEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEE
Confidence 6789999 74444 55555545577777665 22 22 2211 0001112357889999999 6555
Q ss_pred eCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccC-------CCCcceEEEccCCCEEEEEeCCC---CeEEEEE
Q 016318 194 DSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRN-------LQFPNGLSLSKDKSFFVFCEGSV---GRLHKYW 263 (391)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-------~~~~ngia~~~d~~~l~v~et~~---~~I~~~~ 263 (391)
.+. +|.+..||..+++....... ......++++|++++++++ ... +.|..++
T Consensus 203 ~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-~~d~~~g~i~i~d 264 (397)
T 1sq9_A 203 GFN-----------------NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFGCITLYE 264 (397)
T ss_dssp ECT-----------------TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEEEEEEEE
T ss_pred EeC-----------------CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE-ecCCCCceEEEEE
Confidence 533 57899999988766554443 4567789999999976665 444 6788887
Q ss_pred eccccCccceeecc-------------cCCCCCceEeCCCCCEEEEEcCCCch
Q 016318 264 LIGEKAGNLEAFAI-------------LPGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 264 ~~g~~~g~~~~~~~-------------~~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
+... .....+.. ..+....++++++|+++++......+
T Consensus 265 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 265 TEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp TTTC--CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred CCCC--cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 6532 11122222 22334568888899876665544433
No 200
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.37 E-value=0.0003 Score=66.29 Aligned_cols=103 Identities=13% Similarity=0.020 Sum_probs=63.1
Q ss_pred CCcceeecCCCCEEE-EeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCC
Q 016318 178 FTNDLDIDDEGNVYF-TDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV 256 (391)
Q Consensus 178 ~~~~l~~d~~G~ly~-td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~ 256 (391)
+...+++.|||++.+ +..+ .++.|..||.++++.......-...+.++++|||+++..+ + .
T Consensus 135 ~~~~v~fSpDg~~la~as~~----------------~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~-s-~ 196 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSK----------------VPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYI-T-G 196 (365)
T ss_dssp CEEEEEECTTSSCEEEEESC----------------SSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEE-C-S
T ss_pred CEEEEEEcCCCCEEEEEECC----------------CCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEec-c-c
Confidence 456789999997554 4432 2567888999988766555444567899999999966554 3 4
Q ss_pred CeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEc
Q 016318 257 GRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 257 ~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~ 298 (391)
+.+.+++......-..............+++.++|.+.++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s 238 (365)
T 4h5i_A 197 SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAAS 238 (365)
T ss_dssp SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEE
T ss_pred eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEe
Confidence 567777754211000001111112235678888888666543
No 201
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.36 E-value=0.00027 Score=66.58 Aligned_cols=260 Identities=12% Similarity=0.072 Sum_probs=127.1
Q ss_pred eEEEccCCCeeEEEecCCEEEEEeCCceeEE-EeecCCCcccCCCCCCccccccccCccCcc--ceEEEecCCCcEEEEE
Q 016318 73 SMAFDPLGRGPYTGVADGRILFWDGLKWTDF-AFTSNNRSELCNPKPIATSYLKNEHICGRP--LGLRFDKKTGDLYIAD 149 (391)
Q Consensus 73 ~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P--~gi~~d~~~g~L~V~d 149 (391)
+.+++ +|. +|+++.++.|+.++...-+.. ...... ...+ ...+..+ .....+ ++.+|+++
T Consensus 48 ~p~v~-~~~-v~~~~~~g~v~a~d~~tG~~~W~~~~~~-~~~~------------~~~~~~~~~~~~~~~--~~~v~v~~ 110 (376)
T 3q7m_A 48 HPALA-DNV-VYAADRAGLVKALNADDGKEIWSVSLAE-KDGW------------FSKEPALLSGGVTVS--GGHVYIGS 110 (376)
T ss_dssp CCEEE-TTE-EEEECTTSEEEEEETTTCCEEEEEECCC----C------------CSCCCCCEEEEEEEE--TTEEEEEE
T ss_pred ccEEE-CCE-EEEEcCCCeEEEEEccCCceeeeecCcc-cccc------------ccccCcccccCceEe--CCEEEEEc
Confidence 34453 454 999999999999998611111 111000 0000 0000111 223343 68999998
Q ss_pred CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEE
Q 016318 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTV 229 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 229 (391)
....|+.+|.++|+..--. ...+. .....++ .+|.+|+... ++.|+.+|+++|+..-
T Consensus 111 ~~g~l~a~d~~tG~~~W~~-~~~~~---~~~~p~~-~~~~v~v~~~------------------~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 111 EKAQVYALNTSDGTVAWQT-KVAGE---ALSRPVV-SDGLVLIHTS------------------NGQLQALNEADGAVKW 167 (376)
T ss_dssp TTSEEEEEETTTCCEEEEE-ECSSC---CCSCCEE-ETTEEEEECT------------------TSEEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCCCEEEEE-eCCCc---eEcCCEE-ECCEEEEEcC------------------CCeEEEEECCCCcEEE
Confidence 7777999999988654211 11111 1111222 2678998764 3789999998887543
Q ss_pred eccCCCC------cceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccC---CC--------C-CceEeCCCC
Q 016318 230 LLRNLQF------PNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP---GY--------P-DNVRTNEKG 291 (391)
Q Consensus 230 ~~~~~~~------~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~---g~--------p-~~i~~d~~G 291 (391)
-...... ....++. ++ .+|+. +..++|+.++.+. |+........ +. . ....+ .+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~-~~-~v~~g-~~~g~l~~~d~~t---G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~ 240 (376)
T 3q7m_A 168 TVNLDMPSLSLRGESAPTTA-FG-AAVVG-GDNGRVSAVLMEQ---GQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNG 240 (376)
T ss_dssp EEECCC-----CCCCCCEEE-TT-EEEEC-CTTTEEEEEETTT---CCEEEEEECCC-----------CCCCCCEE-ETT
T ss_pred EEeCCCCceeecCCCCcEEE-CC-EEEEE-cCCCEEEEEECCC---CcEEEEEecccCCCCcccccccccCCCcEE-ECC
Confidence 2211110 1223333 34 47776 5567888887542 2221111111 00 0 11122 357
Q ss_pred CEEEEEcCCCchhhhhhhcCccceeeeeecCccceeee-----EEeecCccceEEEEECC-CCCEEEEEeCCCCCeeece
Q 016318 292 EFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHY-----LIHVGGRLHAMAVKYSP-EGKILQVLEDSKGKVVKAI 365 (391)
Q Consensus 292 ~lwva~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~i 365 (391)
.+|++...+.-. .-.+..++.+.+.+....... .+++. ...+.+.++|+ +|+.+.......+. ..
T Consensus 241 ~v~~~~~~g~l~-----~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~-~~~g~l~~~d~~tG~~~w~~~~~~~~---~~ 311 (376)
T 3q7m_A 241 VVFALAYNGNLT-----ALDLRSGQIMWKRELGSVNDFIVDGNRIYLV-DQNDRVMALTIDGGVTLWTQSDLLHR---LL 311 (376)
T ss_dssp EEEEECTTSCEE-----EEETTTCCEEEEECCCCEEEEEEETTEEEEE-ETTCCEEEEETTTCCEEEEECTTTTS---CC
T ss_pred EEEEEecCcEEE-----EEECCCCcEEeeccCCCCCCceEECCEEEEE-cCCCeEEEEECCCCcEEEeecccCCC---cc
Confidence 788876443221 123345566655543221100 11111 22345666774 56665554422222 23
Q ss_pred eEEEEECCEEEEecCCCCeEEEEe
Q 016318 366 SEVEEKDGKLWMGSVLMPFVAVYD 389 (391)
Q Consensus 366 s~~~~~~g~Lylgs~~~~~i~~~~ 389 (391)
+.....+++||+++.. ..+..++
T Consensus 312 ~~~~~~~~~l~v~~~~-g~l~~~d 334 (376)
T 3q7m_A 312 TSPVLYNGNLVVGDSE-GYLHWIN 334 (376)
T ss_dssp CCCEEETTEEEEECTT-SEEEEEE
T ss_pred cCCEEECCEEEEEeCC-CeEEEEE
Confidence 3344568899999864 3444444
No 202
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.36 E-value=9.7e-06 Score=76.49 Aligned_cols=177 Identities=10% Similarity=-0.038 Sum_probs=104.4
Q ss_pred eEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCcc--ceEEEecCCCcEEEE
Q 016318 73 SMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRP--LGLRFDKKTGDLYIA 148 (391)
Q Consensus 73 ~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P--~gi~~d~~~g~L~V~ 148 (391)
++++++||+.+++...++.|+.++.. ....+.... .+.. ....+++ +++++++
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~----------------------~~~~~~~~~~~~~-dg~~l~~ 141 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP----------------------AEWVGYGTWVANS-DCTKLVG 141 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC----------------------TTEEEEEEEEECT-TSSEEEE
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech----------------------hhcccccceeECC-CCCeecc
Confidence 56899999988888888899999876 222221111 0111 1122355 5665553
Q ss_pred E-----------------------CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCC-EEEEeCCCcccchh
Q 016318 149 D-----------------------AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGN-VYFTDSSTNYQRRN 203 (391)
Q Consensus 149 d-----------------------~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~-ly~td~~~~~~~~~ 203 (391)
. ....|+.+|..+++.+.+.... ....++++++ ||+ |.++....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-----~~~~~~~~sp~dg~~l~~~~~~~------ 210 (388)
T 3pe7_A 142 IEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-----QWLGHPIYRPYDDSTVAFCHEGP------ 210 (388)
T ss_dssp EEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEECSC------
T ss_pred ccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-----ccccccEECCCCCCEEEEEEecC------
Confidence 1 1134999999998877765321 2357788999 885 44444220
Q ss_pred heeeecccCCCceEEEEeCCCCeEEEeccCCC--CcceEEEccCCCEEEE-EeCCCC---eEEEEEeccccCccceeecc
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQ--FPNGLSLSKDKSFFVF-CEGSVG---RLHKYWLIGEKAGNLEAFAI 277 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~--~~ngia~~~d~~~l~v-~et~~~---~I~~~~~~g~~~g~~~~~~~ 277 (391)
......+|+.+|.++++.+.+..... ....++++|||+.|++ +...+. .|+++++++. +.+.+..
T Consensus 211 ------~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g---~~~~l~~ 281 (388)
T 3pe7_A 211 ------HDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL---ENRQLTS 281 (388)
T ss_dssp ------TTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC---CEEEEEE
T ss_pred ------CCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC---ceEEEEc
Confidence 00113589999988887777654432 2446789999997744 433222 3889887653 3333333
Q ss_pred cCC------CCCceEeCCCCC
Q 016318 278 LPG------YPDNVRTNEKGE 292 (391)
Q Consensus 278 ~~g------~p~~i~~d~~G~ 292 (391)
.++ .+++++++++|+
T Consensus 282 ~~~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 282 MPACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp ECCEEEEEECTTSSEEEEEEC
T ss_pred CCCceeeeecCCCCeEccCCC
Confidence 333 145555666665
No 203
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.35 E-value=0.00056 Score=63.52 Aligned_cols=191 Identities=9% Similarity=0.016 Sum_probs=112.9
Q ss_pred CcceEEE-----cc-CCCeeEEEecCCEEEEEeCCce-------eEEEeecCCCcccCCCCCCccccccccCccCccceE
Q 016318 70 GPESMAF-----DP-LGRGPYTGVADGRILFWDGLKW-------TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGL 136 (391)
Q Consensus 70 gPe~i~~-----d~-~G~~ly~~~~~g~I~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi 136 (391)
.-.++++ .+ +|+.+++++.|+.|..|+...- .... ...........+
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~--------------------~l~~h~~~V~~~ 82 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHK--------------------ALTGHNHFVSDL 82 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEE--------------------EECCCSSCEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccc--------------------hhccCCCceEEE
Confidence 3456777 55 8888999999999998875410 0000 011112445688
Q ss_pred EEecCCCcEEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 137 RFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 137 ~~d~~~g~L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
++++ ++.+.++... ..|..+|..+++........ ......+++.++|+..++.+. ++
T Consensus 83 ~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h----~~~v~~v~~sp~~~~l~s~~~-----------------d~ 140 (343)
T 2xzm_R 83 ALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGH----QSEVYSVAFSPDNRQILSAGA-----------------ER 140 (343)
T ss_dssp EECS-STTEEEEEETTSEEEEEETTSSCEEEEEECC----CSCEEEEEECSSTTEEEEEET-----------------TS
T ss_pred EECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC----CCcEEEEEECCCCCEEEEEcC-----------------CC
Confidence 9988 5665554444 44888898877543221111 124678999999987776533 57
Q ss_pred eEEEEeCCCCeEEEecc---CCCCcceEEEccCC----------CEEEEEeCCCCeEEEEEeccccCccceeecccCCCC
Q 016318 216 RVLKYDPTTKQTTVLLR---NLQFPNGLSLSKDK----------SFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYP 282 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~---~~~~~ngia~~~d~----------~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p 282 (391)
.+..||........... .......++++|++ .++ ++-...+.|..++..+ .....+....+..
T Consensus 141 ~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~---~~~~~~~~h~~~v 216 (343)
T 2xzm_R 141 EIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYF-ASVGWDGRLKVWNTNF---QIRYTFKAHESNV 216 (343)
T ss_dssp CEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEE-EEEETTSEEEEEETTT---EEEEEEECCSSCE
T ss_pred EEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEE-EEEcCCCEEEEEcCCC---ceeEEEcCccccc
Confidence 78888876444333321 12245678888876 534 4445567787776322 1112222223345
Q ss_pred CceEeCCCCCEEEEEcCCCchhhh
Q 016318 283 DNVRTNEKGEFWVAIHCRRSLYSH 306 (391)
Q Consensus 283 ~~i~~d~~G~lwva~~~~~~~~~~ 306 (391)
..++++++|++.++......+.++
T Consensus 217 ~~~~~s~~g~~l~sgs~dg~v~iw 240 (343)
T 2xzm_R 217 NHLSISPNGKYIATGGKDKKLLIW 240 (343)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEE
T ss_pred eEEEECCCCCEEEEEcCCCeEEEE
Confidence 678899999977765555554443
No 204
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.35 E-value=0.00042 Score=64.02 Aligned_cols=158 Identities=9% Similarity=0.017 Sum_probs=101.0
Q ss_pred cCcceEEEccC----CCeeEEEecCCEEEEEeCC---ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC
Q 016318 69 QGPESMAFDPL----GRGPYTGVADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (391)
Q Consensus 69 ~gPe~i~~d~~----G~~ly~~~~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~ 141 (391)
....++++.|+ ...++++..++.|..|+.. ....+.... ..........+++.++
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~------------------~~~~~~~v~~~~~~~~ 80 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYV------------------DADADENFYTCAWTYD 80 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEE------------------CSCTTCCEEEEEEEEC
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecc------------------ccCCCCcEEEEEeccC
Confidence 34568888863 4457778888888888766 222222111 0011345678888873
Q ss_pred C---Cc-EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCce
Q 016318 142 T---GD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGR 216 (391)
Q Consensus 142 ~---g~-L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~ 216 (391)
. ++ |+++.....|..+|..+++........ ...+..+++.+ ++++.++.+. +|.
T Consensus 81 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~s~~~-----------------dg~ 139 (366)
T 3k26_A 81 SNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGH----GNAINELKFHPRDPNLLLSVSK-----------------DHA 139 (366)
T ss_dssp TTTCCEEEEEEETTCEEEEECTTTCCEEEEEESC----CSCEEEEEECSSCTTEEEEEET-----------------TSC
T ss_pred CCCCCCEEEEecCCCEEEEEEchhceEeeeecCC----CCcEEEEEECCCCCCEEEEEeC-----------------CCe
Confidence 1 34 444544444888998877543322211 23578889998 8887776543 578
Q ss_pred EEEEeCCCCeEEEec----cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 217 VLKYDPTTKQTTVLL----RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 217 l~~~d~~~~~~~~~~----~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
|..||..+++..... ........++++|+++.++.+ ...+.|..+++..
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~ 192 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSC-GMDHSLKLWRINS 192 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESCS
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEe-cCCCCEEEEECCC
Confidence 999999888765554 233466789999999966655 4567888888764
No 205
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.34 E-value=0.00055 Score=74.81 Aligned_cols=156 Identities=13% Similarity=0.036 Sum_probs=101.8
Q ss_pred ccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE-
Q 016318 68 IQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY- 146 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~- 146 (391)
-..-.+++++++|+.+.+++.+|.|..|+......+.... ...+...+++|++ ++++.
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~--------------------~h~~~v~~~~~s~-~~~~l~ 673 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK--------------------AHEDEVLCCAFSS-DDSYIA 673 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------------------CCSSCEEEEEECT-TSSEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec--------------------cCCCCEEEEEEec-CCCEEE
Confidence 3455678999999999999999999999876322222111 1134567899998 55554
Q ss_pred EEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
.+...+.|..+|..+++........ ......+++.++ +.+.++.+. ++.+..||..+
T Consensus 674 s~~~d~~v~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~sg~~-----------------d~~v~vwd~~~ 732 (1249)
T 3sfz_A 674 TCSADKKVKIWDSATGKLVHTYDEH----SEQVNCCHFTNKSNHLLLATGSN-----------------DFFLKLWDLNQ 732 (1249)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSCCEEEEEET-----------------TSCEEEEETTS
T ss_pred EEeCCCeEEEEECCCCceEEEEcCC----CCcEEEEEEecCCCceEEEEEeC-----------------CCeEEEEECCC
Confidence 4444444888999887543322221 124567788774 345555432 57899999888
Q ss_pred CeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 225 KQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 225 ~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
++..... ......+.++++|+++.++.+ +..+.|..+++..
T Consensus 733 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 733 KECRNTMFGHTNSVNHCRFSPDDELLASC-SADGTLRLWDVRS 774 (1249)
T ss_dssp SSEEEEECCCSSCEEEEEECSSTTEEEEE-ESSSEEEEEEGGG
T ss_pred cchhheecCCCCCEEEEEEecCCCEEEEE-ECCCeEEEEeCCC
Confidence 7754433 333456789999999965554 5567788887653
No 206
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.31 E-value=7.8e-05 Score=72.19 Aligned_cols=191 Identities=10% Similarity=0.046 Sum_probs=119.4
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC---Cc-
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT---GD- 144 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~---g~- 144 (391)
..+.+++++++|+.++++..+|.|+.++........ .+.. ......+.+.++++++ + ++
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~--------~~~~--------~~~~h~~~v~~~~~sp-~~~~~~~ 212 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK--------FTQE--------PILGHVSMLTDVHLIK-DSDGHQF 212 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS--------CCCC--------CSEECSSCEEEEEEEE-CTTSCEE
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc--------ccce--------eeecccCceEEEEEcC-CCCCCcE
Confidence 346789999999999999999999998764111000 0000 0111235567899998 5 54
Q ss_pred EEEEECCCCeEEEeCCCCeeE-EceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 145 LYIADAYFGLMKVGPEGGLAT-SLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~-~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
|+.++....|..+|..+++.. .+.... ...+..+++. +|++.++.+. ++.|..||..
T Consensus 213 l~s~~~d~~i~vwd~~~~~~~~~~~~~h----~~~v~~~~~s-d~~~l~s~~~-----------------d~~v~vwd~~ 270 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQCFIVDKWLFGH----KHFVSSICCG-KDYLLLSAGG-----------------DDKIFAWDWK 270 (450)
T ss_dssp EEEEETTSCEEEEEESCTTCEEEECCCC----SSCEEEEEEC-STTEEEEEES-----------------SSEEEEEETT
T ss_pred EEEEcCCCcEEEEECCCCceeeeeecCC----CCceEEEEEC-CCCEEEEEeC-----------------CCeEEEEECC
Confidence 455554555888888766432 221111 1356888999 8887777643 5789999988
Q ss_pred CCeEEEeccC--------------------------CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc
Q 016318 224 TKQTTVLLRN--------------------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI 277 (391)
Q Consensus 224 ~~~~~~~~~~--------------------------~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~ 277 (391)
+++....... -....+++++|++++++++....+.|..+++.....++.+....
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~ 350 (450)
T 2vdu_B 271 TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQI 350 (450)
T ss_dssp TCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEE
T ss_pred CCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccE
Confidence 8764333210 11345789999999888886567888888872221222233322
Q ss_pred --cCCCCCceEeCCCCCEEEEEcC
Q 016318 278 --LPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 278 --~~g~p~~i~~d~~G~lwva~~~ 299 (391)
.++.+.+++++++ .+|++...
T Consensus 351 ~~~~~~v~~~~~~~~-~~~v~~~~ 373 (450)
T 2vdu_B 351 ITFPYNVISLSAHND-EFQVTLDN 373 (450)
T ss_dssp EECSSCEEEEEEETT-EEEEEECC
T ss_pred eccCCceEEEEecCC-cEEEEEec
Confidence 2355677888884 57777655
No 207
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.30 E-value=1.2e-05 Score=75.49 Aligned_cols=189 Identities=6% Similarity=-0.044 Sum_probs=109.5
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCce---eEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKW---TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
...++++.++|+.+++++.|+.|..|+...- ..... ..........+++++++..|+
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~--------------------~~~~~~~v~~~~~~~~~~~l~ 116 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV--------------------LLRLNRAATFVRWSPNEDKFA 116 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEE--------------------CCCCSSCEEEEECCTTSSCCE
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeE--------------------ecccCCceEEEEECCCCCEEE
Confidence 4568899999998999999999999876521 11111 111234567889988444566
Q ss_pred EEECCCCeEEEeCCCCe----eEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 147 IADAYFGLMKVGPEGGL----ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~----~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
++.....|..+|.++++ .+.+.. .....+..+++.++|++.++.+. ++.+..||.
T Consensus 117 ~~~~d~~i~iwd~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~ 175 (377)
T 3dwl_C 117 VGSGARVISVCYFEQENDWWVSKHLKR----PLRSTILSLDWHPNNVLLAAGCA-----------------DRKAYVLSA 175 (377)
T ss_dssp EEESSSCEEECCC-----CCCCEEECS----SCCSCEEEEEECTTSSEEEEEES-----------------SSCEEEEEE
T ss_pred EEecCCeEEEEEECCcccceeeeEeec----ccCCCeEEEEEcCCCCEEEEEeC-----------------CCEEEEEEE
Confidence 66655558888887764 222221 11235788999999987776533 467777776
Q ss_pred CCCe------------------EEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCcc--ceeecccCCCC
Q 016318 223 TTKQ------------------TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN--LEAFAILPGYP 282 (391)
Q Consensus 223 ~~~~------------------~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~--~~~~~~~~g~p 282 (391)
.+++ ...........+.++++||+++++.+ ...+.|..+++....... ...+....+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 254 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA-GHDSSVTIAYPSAPEQPPRALITVKLSQLPL 254 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE-ETTTEEC-CEECSTTSCEEECCCEECSSSCE
T ss_pred EecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE-eCCCcEEEEECCCCCCcceeeEeecCCCCce
Confidence 4221 11111222346789999999966655 556788888876532100 11222222334
Q ss_pred CceEeCCCCCEEEEEcCC
Q 016318 283 DNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 283 ~~i~~d~~G~lwva~~~~ 300 (391)
..++++++|.+.++....
T Consensus 255 ~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 255 RSLLWANESAIVAAGYNY 272 (377)
T ss_dssp EEEEEEETTEEEEEESSS
T ss_pred EEEEEcCCCCEEEEEcCC
Confidence 578888899876665443
No 208
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.30 E-value=0.00036 Score=66.80 Aligned_cols=209 Identities=11% Similarity=0.113 Sum_probs=115.4
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCcee-----------EEEeecCCCcccCCCCCCccccccccCccCccceEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWT-----------DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~ 138 (391)
.-.+++++++|+.+.++..+|.|..|+..... ........... -.++......+....+++
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~--------~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPE--------FDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCE--------EEGGGTEEECCCCCEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccc--------ccccccccccCceEEEEE
Confidence 45688999999999999999999999765111 11111000000 000000000145678999
Q ss_pred ecCC--CcEEEEECCCCeEEEeCCCCeeEEce------------------------------------eccCCCcccCCc
Q 016318 139 DKKT--GDLYIADAYFGLMKVGPEGGLATSLA------------------------------------TEAEGVPLRFTN 180 (391)
Q Consensus 139 d~~~--g~L~V~d~~~gl~~~d~~~g~~~~~~------------------------------------~~~~~~~~~~~~ 180 (391)
.+++ ..|..+.....|..++..++...... ..........+.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 9843 23555544444766666543321000 000001123567
Q ss_pred ceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCC-CeEEEe--------ccCCCCcceEEEccCC-CEEE
Q 016318 181 DLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT-KQTTVL--------LRNLQFPNGLSLSKDK-SFFV 250 (391)
Q Consensus 181 ~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~~~~~--------~~~~~~~ngia~~~d~-~~l~ 250 (391)
.+++.++|+++++. . ++.|..||..+ ++.... ...-...+.++++|++ +.++
T Consensus 182 ~~~~~~~~~~l~s~-~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 243 (447)
T 3dw8_B 182 SISINSDYETYLSA-D-----------------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFV 243 (447)
T ss_dssp EEEECTTSSEEEEE-C-----------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEE
T ss_pred EEEEcCCCCEEEEe-C-----------------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEE
Confidence 88899999877775 3 57888999873 322221 1122346789999998 7554
Q ss_pred EEeCCCCeEEEEEeccccCc--cceeecccCC------------CCCceEeCCCCCEEEEEcCCCchhhh
Q 016318 251 FCEGSVGRLHKYWLIGEKAG--NLEAFAILPG------------YPDNVRTNEKGEFWVAIHCRRSLYSH 306 (391)
Q Consensus 251 v~et~~~~I~~~~~~g~~~g--~~~~~~~~~g------------~p~~i~~d~~G~lwva~~~~~~~~~~ 306 (391)
.+ +..+.|..+++...... ....+..... ....++++++|++.++... ..+.++
T Consensus 244 s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 244 YS-SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp EE-ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred EE-eCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 44 56678888887643211 1233322111 3457889999997776555 554443
No 209
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.29 E-value=0.001 Score=68.16 Aligned_cols=188 Identities=12% Similarity=0.082 Sum_probs=116.6
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
..-.++++.++|+.+.+++.||.|..|+........... ...+...++++++++..|..+
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~s~~~~~l~s~ 490 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV--------------------GHTKDVLSVAFSLDNRQIVSA 490 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEECTTSSCEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe--------------------CCCCCEEEEEEeCCCCEEEEE
Confidence 345688999999999999999999999876222211111 113446788999844445555
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCC--CEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG--NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G--~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
.....|..+|..+.....+.....+ .......+++.+++ .+.++.+. ++.|..||..+++
T Consensus 491 s~D~~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~-----------------d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 491 SRDRTIKLWNTLGECKYTISEGGEG-HRDWVSCVRFSPNTLQPTIVSASW-----------------DKTVKVWNLSNCK 552 (694)
T ss_dssp ETTSCEEEECTTSCEEEEECSSTTS-CSSCEEEEEECSCSSSCEEEEEET-----------------TSCEEEEETTTCC
T ss_pred eCCCEEEEEECCCCcceeeccCCCC-CCCcEEEEEEeCCCCcceEEEEeC-----------------CCeEEEEECCCCc
Confidence 5555588888765543333221111 12346778888876 34555432 5789999988877
Q ss_pred EEEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCCCCceEeCCCCCEEEEEcC
Q 016318 227 TTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 227 ~~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
...... .....+.++++||++.+..+ ...+.|..+++... + .... ........+++++++.+.++...
T Consensus 553 ~~~~~~~h~~~v~~v~~spdg~~l~sg-~~Dg~i~iwd~~~~---~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 553 LRSTLAGHTGYVSTVAVSPDGSLCASG-GKDGVVLLWDLAEG---K-KLYSLEANSVIHALCFSPNRYWLCAATE 622 (694)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE-ETTSBCEEEETTTT---E-EEECCBCSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEEcCCCCCEEEEEEeCCCCEEEEE-eCCCeEEEEECCCC---c-eEEEecCCCcEEEEEEcCCCcEEEEEcC
Confidence 654433 33456789999999955444 55677888876532 1 1111 12233456888998876665443
No 210
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.29 E-value=0.00013 Score=67.05 Aligned_cols=136 Identities=9% Similarity=0.150 Sum_probs=85.5
Q ss_pred CCCeeEEEec--CCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC---
Q 016318 79 LGRGPYTGVA--DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY--- 151 (391)
Q Consensus 79 ~G~~ly~~~~--~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~--- 151 (391)
+|+.+|.... +++|++++.+ ..+.+.. ..+.-|.. +++.||.++..
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-------------------------~~~~~i~~--~g~~Iyy~~~~~~~ 76 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-------------------------DTAMYINA--DKNYVYYVRNNNQK 76 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-------------------------EEEEEEEE--CSSEEEEEEECC--
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccC-------------------------CceeeEEE--cCCEEEEEECCCCc
Confidence 4455676642 5899999876 2222221 11233333 35677766542
Q ss_pred -----------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 152 -----------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 152 -----------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
..|++++.++++.+.+.... .+.++++ .+.||+++.+ ......|++.
T Consensus 77 ~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~-------~~~~s~~-g~~Iy~~~~~--------------~~~~~~Iy~~ 134 (302)
T 3s25_A 77 ITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP-------CIYASLI-GNYIYYLHYD--------------TQTATSLYRI 134 (302)
T ss_dssp ----CCSSCCSEEEEEEETTSCCCEEEECSC-------EEEEEEE-TTEEEEEEES--------------SSSCEEEEEE
T ss_pred ccccceeccCCCeEEEEeCCCCcceEeecCC-------ccEEEEe-CCEEEEEeec--------------CCCCceEEEE
Confidence 24999999988766654321 1233332 3479998811 0124689999
Q ss_pred eCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccc
Q 016318 221 DPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGE 267 (391)
Q Consensus 221 d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~ 267 (391)
+.++...+.+..... .+++++++.||+++....+|++++++|.
T Consensus 135 ~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 135 RIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp ETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred ECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 988777666654432 4567899999999887789999998874
No 211
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.29 E-value=0.00011 Score=74.43 Aligned_cols=195 Identities=11% Similarity=0.032 Sum_probs=112.2
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
+|.+++++|+|+.+.++. ++.|..++.......... .........++|++ +|++.++.
T Consensus 20 ~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~--------------------~~h~~~v~~~~~sp-dg~~lasg 77 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIY--------------------TEHSHQTTVAKTSP-SGYYCASG 77 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEE--------------------CCCSSCEEEEEECT-TSSEEEEE
T ss_pred ceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEe--------------------cCCCCceEEEEECC-CCcEEEEE
Confidence 678899999999777766 568888876411111100 01124467889999 67655544
Q ss_pred CCCC-eEEEeCCCCeeEEc--eeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 150 AYFG-LMKVGPEGGLATSL--ATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 150 ~~~g-l~~~d~~~g~~~~~--~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
...| |..+|..+++.... ..... ...++++++++|...++.+.. ....+.+..+|.. ..
T Consensus 78 ~~d~~v~lWd~~~~~~~~~~~~~~~~----~~v~~v~fs~dg~~l~~~~~~-------------~~~~~~v~~wd~~-~~ 139 (611)
T 1nr0_A 78 DVHGNVRIWDTTQTTHILKTTIPVFS----GPVKDISWDSESKRIAAVGEG-------------RERFGHVFLFDTG-TS 139 (611)
T ss_dssp ETTSEEEEEESSSTTCCEEEEEECSS----SCEEEEEECTTSCEEEEEECC-------------SSCSEEEEETTTC-CB
T ss_pred eCCCCEEEeECCCCcceeeEeecccC----CceEEEEECCCCCEEEEEECC-------------CCceeEEEEeeCC-CC
Confidence 4444 77778754322111 11111 247889999999876664321 0113567777742 22
Q ss_pred EEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCchhhh
Q 016318 227 TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLYSH 306 (391)
Q Consensus 227 ~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~ 306 (391)
...+...-...+.++++|++...+++-...+.|..++.... .....+....+....++++++|++.++......+.++
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lw 217 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY 217 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEE
Confidence 22233333456789999998755566566677777764321 1112222222345678899999987776665555443
No 212
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.28 E-value=6.2e-05 Score=72.54 Aligned_cols=193 Identities=12% Similarity=0.009 Sum_probs=121.0
Q ss_pred CcceEEEccCCC-eeEEEecCCEEEEEeCCce----eEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 70 GPESMAFDPLGR-GPYTGVADGRILFWDGLKW----TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 70 gPe~i~~d~~G~-~ly~~~~~g~I~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
...++++++++. .++++..+|.|..|+.... ..+... .......+...+++++++++.
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-----------------~~~~~h~~~v~~v~~~p~~~~ 245 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAK-----------------NIFTGHTAVVEDVAWHLLHES 245 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECS-----------------EEECCCSSCEEEEEECSSCTT
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccc-----------------eeecCCCCCEeeeEEeCCCCC
Confidence 467899999887 8999999999999987520 000000 011112345778999885566
Q ss_pred EEEEECCCC-eEEEeCCCCe----eEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEE
Q 016318 145 LYIADAYFG-LMKVGPEGGL----ATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVL 218 (391)
Q Consensus 145 L~V~d~~~g-l~~~d~~~g~----~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~ 218 (391)
++++....| |..+|..++. +..+. .. ...++.+++.++|. ++++.+. +|.|.
T Consensus 246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~----~~~v~~i~~~p~~~~~l~tg~~-----------------dg~v~ 303 (430)
T 2xyi_A 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVD-AH----TAEVNCLSFNPYSEFILATGSA-----------------DKTVA 303 (430)
T ss_dssp EEEEEETTSEEEEEETTCSCSSSCSEEEE-CC----SSCEEEEEECSSCTTEEEEEET-----------------TSEEE
T ss_pred EEEEEeCCCeEEEEECCCCCCCcceeEee-cC----CCCeEEEEeCCCCCCEEEEEeC-----------------CCeEE
Confidence 666555544 8888887652 11121 11 13578899999885 6766533 57888
Q ss_pred EEeCCCC-e-EEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCc---------cceeeccc---CCCCCc
Q 016318 219 KYDPTTK-Q-TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAG---------NLEAFAIL---PGYPDN 284 (391)
Q Consensus 219 ~~d~~~~-~-~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g---------~~~~~~~~---~g~p~~ 284 (391)
.||..+. + ...+.........++++|+++.++++....++|..+++...... ..+..... .+.+..
T Consensus 304 vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 383 (430)
T 2xyi_A 304 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383 (430)
T ss_dssp EEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE
T ss_pred EEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE
Confidence 9998763 2 33443334567789999999767777677788888887642110 01222222 234677
Q ss_pred eEeCCCCC-EEEEEcCCC
Q 016318 285 VRTNEKGE-FWVAIHCRR 301 (391)
Q Consensus 285 i~~d~~G~-lwva~~~~~ 301 (391)
++.+++|. ++++....+
T Consensus 384 ~~~~p~~~~~l~s~s~dg 401 (430)
T 2xyi_A 384 FSWNPNEPWIICSVSEDN 401 (430)
T ss_dssp EEECSSSTTEEEEEETTS
T ss_pred EEECCCCCCEEEEEECCC
Confidence 88999998 666655443
No 213
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.28 E-value=8e-05 Score=77.44 Aligned_cols=191 Identities=7% Similarity=-0.081 Sum_probs=117.5
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V~ 148 (391)
...+++++++|+.+.+++.+|.|..|+........... ...+....+++++ ++. |.++
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--------------------~~~~~v~~~~~s~-~~~~l~~~ 115 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE--------------------AHPDYIRSIAVHP-TKPYVLSG 115 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECS-SSSEEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe--------------------cCCCCEEEEEEeC-CCCEEEEE
Confidence 45688999999999999999999999876222221111 1134567889998 554 5555
Q ss_pred ECCCCeEEEeCCCC-eeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 149 DAYFGLMKVGPEGG-LATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 149 d~~~gl~~~d~~~g-~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
+....|..+|.+++ ......... ...+..+++.+ +|+..++.+. +|.|..||..+++
T Consensus 116 ~~dg~i~vw~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~~l~~~~~-----------------dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 116 SDDLTVKLWNWENNWALEQTFEGH----EHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQST 174 (814)
T ss_dssp ETTSEEEEEEGGGTSEEEEEEECC----SSCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCSS
T ss_pred cCCCEEEEEECCCCceEEEEEcCC----CCcEEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCc
Confidence 54445888887765 322222211 12467788888 7766666533 5789999986654
Q ss_pred EEE-eccC-CCCcceEEEcc--CCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCc
Q 016318 227 TTV-LLRN-LQFPNGLSLSK--DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 227 ~~~-~~~~-~~~~ngia~~~--d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~ 302 (391)
... +... ....+.++++| +++.++++ +..+.|..+++...+ ....+....+....++++++|.+.++......
T Consensus 175 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 251 (814)
T 3mkq_A 175 PNFTLTTGQERGVNYVDYYPLPDKPYMITA-SDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGT 251 (814)
T ss_dssp CSEEEECCCTTCCCEEEECCSTTCCEEEEE-CTTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred ceeEEecCCCCCEEEEEEEECCCCCEEEEE-eCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe
Confidence 322 2222 24567899998 88866655 667788888765321 12222222233456788888886665554444
Q ss_pred hhh
Q 016318 303 LYS 305 (391)
Q Consensus 303 ~~~ 305 (391)
+..
T Consensus 252 v~v 254 (814)
T 3mkq_A 252 LKI 254 (814)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.26 E-value=2.6e-05 Score=73.88 Aligned_cols=200 Identities=8% Similarity=-0.077 Sum_probs=113.2
Q ss_pred cCcceEEEccCCCeeEEEecC--CEEEE--EeCCceeEEEeec-------CCC--cccCCCCCCc------c-----ccc
Q 016318 69 QGPESMAFDPLGRGPYTGVAD--GRILF--WDGLKWTDFAFTS-------NNR--SELCNPKPIA------T-----SYL 124 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~--g~I~~--~~~~~~~~~~~~~-------~~~--~~~~~~~~~~------~-----~~~ 124 (391)
..|+.+++++||+.+|++... ..+.. +|......+.... ... ...|. .+.. . ..+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~-dg~~~~vd~~~~~~~~~~v 202 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSC-PASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCC-TTSCEEEECCSSCCCCEEC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcC-CCCEEEEECccccccCCeE
Confidence 469999999999999998753 45666 6664322221100 000 00111 0000 0 000
Q ss_pred -----cccCccCccceEEEecCCCcEEEEECCCCeEEEeCCCCeeEEceec-cC-C---CcccCCcc---eeecCCC-CE
Q 016318 125 -----KNEHICGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATE-AE-G---VPLRFTND---LDIDDEG-NV 190 (391)
Q Consensus 125 -----~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~-~~-~---~~~~~~~~---l~~d~~G-~l 190 (391)
.......+|. . .++++.+|+.+. +.+..+|..++..+..... .. . .....|.+ ++++++| ++
T Consensus 203 ~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l 278 (368)
T 1mda_H 203 GAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278 (368)
T ss_dssp CCCSCTTSCBCSCCE--E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred EEEeeeeeeCCCCcc--c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence 0111234465 3 443566777666 6699999876543332211 00 0 01112333 7889886 69
Q ss_pred EEEeC---CCcccchhheeeecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeC-CCCeEEEEEecc
Q 016318 191 YFTDS---STNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEG-SVGRLHKYWLIG 266 (391)
Q Consensus 191 y~td~---~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et-~~~~I~~~~~~g 266 (391)
|++.. +.. +. ..+.+..+|.++++...-......|+||++++||+.+|++.. ..+.|..++.+.
T Consensus 279 yV~~~~~~~~~---------~~---~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 279 MILTVEHSRSC---------LA---AAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEEEECSSCT---------TS---CEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred EEEeccccCcc---------cc---cCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 98763 100 00 013566999998876554433347999999999998888877 589999999654
Q ss_pred ccCccceeecc--cCCCCCceEeCCC
Q 016318 267 EKAGNLEAFAI--LPGYPDNVRTNEK 290 (391)
Q Consensus 267 ~~~g~~~~~~~--~~g~p~~i~~d~~ 290 (391)
.++... ..+.|++|++..+
T Consensus 347 -----~kvv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 347 -----DQDQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp -----CEEEEECCCCSCCCEEECCCC
T ss_pred -----CcEEEEEECCCCCCEEEeecC
Confidence 233333 3457999988653
No 215
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.26 E-value=0.00067 Score=64.03 Aligned_cols=196 Identities=12% Similarity=0.096 Sum_probs=112.7
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
.-.++++.++|+.+.+++.||.|..|+........... ........+++++ ++++.++.
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~--------------------~h~~~v~~~~~s~-~g~~las~ 126 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK--------------------LHCPWVMECAFAP-NGQSVACG 126 (380)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE--------------------CCCTTCCCCEECT-TSSEEEEC
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe--------------------cCCCCEEEEEECC-CCCEEEEe
Confidence 45688999999989999999999999876222111111 0123356778988 56655543
Q ss_pred CC-CCeEEEeCCCCeeEE----ceeccCCCcccCCcceeecCC-CCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 150 AY-FGLMKVGPEGGLATS----LATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 150 ~~-~gl~~~d~~~g~~~~----~~~~~~~~~~~~~~~l~~d~~-G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
.. ..+..++..+..... ......+. ......+++.++ +...++.+. ++.+..||..
T Consensus 127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh-~~~v~~~~~~~~~~~~l~s~s~-----------------D~~i~~wd~~ 188 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRDGNMPVSRVLTGH-KGYASSCQYVPDQETRLITGSG-----------------DQTCVLWDVT 188 (380)
T ss_dssp CSSSCCEEEECCCCSSCCCSSTTCCBCCCC-SSCCCCCBCCSSSSSCEEEECT-----------------TSCEEEECTT
T ss_pred eCCCcEEEEECCCCccccCCccceeeccCC-CcceEEEEEecCCCCEEEEECC-----------------CCcEEEEEcC
Confidence 33 446666654321100 00011111 123455666664 344444432 5789999998
Q ss_pred CCeEEEecc-C-----CCCcceEEEcc-CCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEE
Q 016318 224 TKQTTVLLR-N-----LQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 224 ~~~~~~~~~-~-----~~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva 296 (391)
+++...... . ......+++++ +++ ++++-...+.|..+++.... .....+....+....++++++|+++++
T Consensus 189 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s 266 (380)
T 3iz6_a 189 TGQRISIFGSEFPSGHTADVLSLSINSLNAN-MFISGSCDTTVRLWDLRITS-RAVRTYHGHEGDINSVKFFPDGQRFGT 266 (380)
T ss_dssp TCCEEEEECCCSSSSCCSCEEEEEECSSSCC-EEEEEETTSCEEEEETTTTC-CCCEEECCCSSCCCEEEECTTSSEEEE
T ss_pred CCcEEEEeecccCCCCccCeEEEEeecCCCC-EEEEEECCCeEEEEECCCCC-cceEEECCcCCCeEEEEEecCCCeEEE
Confidence 876544331 1 12345677766 667 55555667788888765211 112233333345678999999998777
Q ss_pred EcCCCchhhh
Q 016318 297 IHCRRSLYSH 306 (391)
Q Consensus 297 ~~~~~~~~~~ 306 (391)
......+.++
T Consensus 267 ~s~D~~i~lw 276 (380)
T 3iz6_a 267 GSDDGTCRLF 276 (380)
T ss_dssp ECSSSCEEEE
T ss_pred EcCCCeEEEE
Confidence 6665555444
No 216
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.26 E-value=0.00029 Score=66.54 Aligned_cols=201 Identities=12% Similarity=0.085 Sum_probs=120.7
Q ss_pred cccCcceEEEccCCCeeEEEecC---------------CEEEEEeCCce--eEEEeecCCCcccCCCCCCccccccccCc
Q 016318 67 QIQGPESMAFDPLGRGPYTGVAD---------------GRILFWDGLKW--TDFAFTSNNRSELCNPKPIATSYLKNEHI 129 (391)
Q Consensus 67 ~~~gPe~i~~d~~G~~ly~~~~~---------------g~I~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (391)
.+...-++.+|+.|++|..++.. -+|+.+|...- +.+.... +.. .....
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~------~p~--------~~~~~ 150 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYY------FPT--------RLVEK 150 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEE------CCG--------GGCCC
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEE------CCH--------Hhccc
Confidence 47788899999999844445431 25677766521 2221110 000 01111
Q ss_pred cCccceEEEe-cC------CCcEEEEECC-CCeEEEeCCCCeeEEceec-----------cCCCcc---cCCcceeecCC
Q 016318 130 CGRPLGLRFD-KK------TGDLYIADAY-FGLMKVGPEGGLATSLATE-----------AEGVPL---RFTNDLDIDDE 187 (391)
Q Consensus 130 ~g~P~gi~~d-~~------~g~L~V~d~~-~gl~~~d~~~g~~~~~~~~-----------~~~~~~---~~~~~l~~d~~ 187 (391)
...-..+++| .+ ++..||+|.. .||.++|..+++..++... .+|..+ ...++|+++++
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 2445678888 21 3568999986 5799999998876655421 112222 35677888875
Q ss_pred ----C-CEEEEeCCCcccchhheeeecccCCCceEEEEeCC-------CCeEEEeccCC--CCcceEEEc-cCCCEEEEE
Q 016318 188 ----G-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT-------TKQTTVLLRNL--QFPNGLSLS-KDKSFFVFC 252 (391)
Q Consensus 188 ----G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-------~~~~~~~~~~~--~~~ngia~~-~d~~~l~v~ 252 (391)
+ .||+...++ .++++..++ ..+++.+-+.. ....+.+++ .+|. ||++
T Consensus 231 ~~~~~~~LYf~plss-----------------~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~-ly~~ 292 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSA-----------------IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKV-IFFA 292 (381)
T ss_dssp CTTSCCEEEEEESSC-----------------SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCE-EEEE
T ss_pred cCCCCeEEEEEECCC-----------------CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCe-EEEE
Confidence 3 699987442 245544310 12333333322 122346676 5565 9999
Q ss_pred eCCCCeEEEEEecc-c-cCccceeecccC--CCCCceEeCCCCCEEEEEcC
Q 016318 253 EGSVGRLHKYWLIG-E-KAGNLEAFAILP--GYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 253 et~~~~I~~~~~~g-~-~~g~~~~~~~~~--g~p~~i~~d~~G~lwva~~~ 299 (391)
+...+.|.+++..+ + +..+.+++..-+ -+|+++.++.+|.+|+....
T Consensus 293 ~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 293 EANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp ESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred eccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 99999999998765 3 124455555333 37999999999999998755
No 217
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.25 E-value=0.00054 Score=63.56 Aligned_cols=188 Identities=10% Similarity=0.004 Sum_probs=112.7
Q ss_pred cCCCeeEEEecCCEEEEEeCC---ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCe
Q 016318 78 PLGRGPYTGVADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (391)
Q Consensus 78 ~~G~~ly~~~~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl 154 (391)
.+++.++++..||.|..|+.. ....+.... .......|.-+.-+. ++.+.+-+....+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~------------------v~~~~~~~~~~s~s~-D~~i~~w~~~~~~ 106 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPN------------------PRTGGEHPAIISRGP-CNRLLLLYPGNQI 106 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEEC------------------CCTTCCCCSEEEECS-TTEEEEEETTTEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCC------------------ceeeeeCCceEEecC-CCeEEEEEccCce
Confidence 456779999999999999865 222222110 000112233222333 6777777766667
Q ss_pred EEEeCCCCe-eEEceeccCCCcccCCcceeecC--CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEec
Q 016318 155 MKVGPEGGL-ATSLATEAEGVPLRFTNDLDIDD--EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 155 ~~~d~~~g~-~~~~~~~~~~~~~~~~~~l~~d~--~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 231 (391)
..++..+++ ++.+.... ......+++.+ +|+++++.+. +|.+..||..+++.....
T Consensus 107 ~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~s~-----------------dg~i~~wd~~~~~~~~~~ 165 (343)
T 3lrv_A 107 TILDSKTNKVLREIEVDS----ANEIIYMYGHNEVNTEYFIWADN-----------------RGTIGFQSYEDDSQYIVH 165 (343)
T ss_dssp EEEETTTCCEEEEEECCC----SSCEEEEECCC---CCEEEEEET-----------------TCCEEEEESSSSCEEEEE
T ss_pred EEeecCCcceeEEeecCC----CCCEEEEEcCCCCCCCEEEEEeC-----------------CCcEEEEECCCCcEEEEE
Confidence 777877765 32222111 12467888999 8988887643 578999999888775443
Q ss_pred cC--CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc-cCCCCCceEeCCCCCEEEEEcCCCchhhhhh
Q 016318 232 RN--LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEKGEFWVAIHCRRSLYSHLM 308 (391)
Q Consensus 232 ~~--~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~~G~lwva~~~~~~~~~~~l 308 (391)
.. ....+.++++||++.+..+ +..+.|..+++...+.- ...+.. ..+....++++++|.+.++.... .+.++.+
T Consensus 166 ~~~~~~~i~~~~~~pdg~~lasg-~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~ 242 (343)
T 3lrv_A 166 SAKSDVEYSSGVLHKDSLLLALY-SPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDL 242 (343)
T ss_dssp CCCSSCCCCEEEECTTSCEEEEE-CTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEET
T ss_pred ecCCCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEc
Confidence 22 2246789999999955444 66778888887643211 022322 23445678999999876665543 4444433
No 218
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.25 E-value=0.00056 Score=62.15 Aligned_cols=195 Identities=13% Similarity=0.083 Sum_probs=108.7
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-CCcEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGDLY 146 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~-~g~L~ 146 (391)
.-.+++++++|+.+.++..|+.|..|+.. ....... .....+...+++|.+. +++++
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~--------------------l~gH~~~V~~v~~s~~~~g~~l 70 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDT--------------------LTGHEGPVWRVDWAHPKFGTIL 70 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEE--------------------ECCCSSCEEEEEECCGGGCSEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEE--------------------EccccCCeEEEEecCCCcCCEE
Confidence 34578999999999999999999988754 1111111 1111344567888642 25555
Q ss_pred EEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 147 IADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 147 V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
++... ..|..+|..+++.+.+... .+ .....+.+++.++ |.+.++.+. ++.+..||..
T Consensus 71 ~s~s~D~~v~iWd~~~~~~~~~~~~-~~-h~~~v~~v~~~p~~~g~~l~s~s~-----------------d~~v~~wd~~ 131 (297)
T 2pm7_B 71 ASCSYDGKVMIWKEENGRWSQIAVH-AV-HSASVNSVQWAPHEYGPMLLVASS-----------------DGKVSVVEFK 131 (297)
T ss_dssp EEEETTTEEEEEEBSSSCBCCCEEE-CC-CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEEBC
T ss_pred EEEcCCCEEEEEEcCCCceEEEEEe-ec-CCCceeEEEeCcCCCCcEEEEEEC-----------------CCcEEEEEec
Confidence 54444 4477788877643222111 11 1124678888886 776666533 5678888876
Q ss_pred CCe---EEEeccCCCCcceEEEccC-------------CCEEEEEeCCCCeEEEEEeccccCccceeecccCC---CCCc
Q 016318 224 TKQ---TTVLLRNLQFPNGLSLSKD-------------KSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG---YPDN 284 (391)
Q Consensus 224 ~~~---~~~~~~~~~~~ngia~~~d-------------~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g---~p~~ 284 (391)
++. ...+.......+.++++|+ ++.+ ++-...+.|..+++.... ........+.+ ....
T Consensus 132 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l-~sgs~D~~v~lwd~~~~~-~~~~~~~~l~~H~~~V~~ 209 (297)
T 2pm7_B 132 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDA-QTYVLESTLEGHSDWVRD 209 (297)
T ss_dssp SSSCBCCEEEECCSSCEEEEEECCCC------------CCEE-EEEETTSCEEEEEEETTT-TEEEEEEEECCCSSCEEE
T ss_pred CCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceE-EEEcCCCcEEEEEEcCCC-ceEEEEEEecCCCCceEE
Confidence 542 2222222334567888886 4544 444556677777765321 11111122333 3456
Q ss_pred eEeCCCC---CEEEEEcCCCchhh
Q 016318 285 VRTNEKG---EFWVAIHCRRSLYS 305 (391)
Q Consensus 285 i~~d~~G---~lwva~~~~~~~~~ 305 (391)
+++++++ ++.++....+.+.+
T Consensus 210 v~~sp~~~~~~~las~s~D~~v~i 233 (297)
T 2pm7_B 210 VAWSPTVLLRSYMASVSQDRTCII 233 (297)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEE
T ss_pred EEECCCCCCceEEEEEECCCcEEE
Confidence 7888875 55555444444443
No 219
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.24 E-value=0.00094 Score=60.19 Aligned_cols=180 Identities=14% Similarity=0.050 Sum_probs=105.8
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCce---eEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKW---TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
...+++++++|+.++++..+|.|..|+.... ..+. ...........+.++ ++.|+
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~--------------------~~~~~~~~i~~~~~~--~~~l~ 118 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLY--------------------TLIGHQGNVCSLSFQ--DGVVI 118 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-C--------------------EECCCSSCEEEEEEE--TTEEE
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCccc--------------------chhhcccCEEEEEec--CCEEE
Confidence 4568899999999999999999888865410 1110 111113445677774 45666
Q ss_pred EEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCC
Q 016318 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
++.....|..+| .......+. .. ......++..+ +++..++.+. +|.+..||.. .
T Consensus 119 ~~~~d~~i~~~d-~~~~~~~~~-~~----~~~v~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~-~ 174 (313)
T 3odt_A 119 SGSWDKTAKVWK-EGSLVYNLQ-AH----NASVWDAKVVSFSENKFLTASA-----------------DKTIKLWQND-K 174 (313)
T ss_dssp EEETTSEEEEEE-TTEEEEEEE-CC----SSCEEEEEEEETTTTEEEEEET-----------------TSCEEEEETT-E
T ss_pred EEeCCCCEEEEc-CCcEEEecc-cC----CCceeEEEEccCCCCEEEEEEC-----------------CCCEEEEecC-c
Confidence 666555588888 222222221 11 12355666665 6666665533 5788888833 2
Q ss_pred eEEEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcC
Q 016318 226 QTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 226 ~~~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
....+.. .......+++++++. ++.+ ...+.|..+++... .....+....+....++++++|.++.+...
T Consensus 175 ~~~~~~~~~~~~i~~~~~~~~~~-~~~~-~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d 245 (313)
T 3odt_A 175 VIKTFSGIHNDVVRHLAVVDDGH-FISC-SNDGLIKLVDMHTG--DVLRTYEGHESFVYCIKLLPNGDIVSCGED 245 (313)
T ss_dssp EEEEECSSCSSCEEEEEEEETTE-EEEE-ETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECTTSCEEEEETT
T ss_pred eEEEEeccCcccEEEEEEcCCCe-EEEc-cCCCeEEEEECCch--hhhhhhhcCCceEEEEEEecCCCEEEEecC
Confidence 3333333 344667899999998 5544 55678888886532 112222222344567889999976655443
No 220
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.23 E-value=0.00091 Score=62.20 Aligned_cols=155 Identities=9% Similarity=0.038 Sum_probs=94.7
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
.-.+++++++|+.+.+++.|+.|..|+.. ........ ....+...++++++ ++++++
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~--------------------~~h~~~v~~v~~sp-~~~~l~ 121 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL--------------------EGHENEVKSVAWAP-SGNLLA 121 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE--------------------CCCSSCEEEEEECT-TSSEEE
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc--------------------cCCCCCceEEEEeC-CCCEEE
Confidence 45689999999999999999998888654 22222211 11134567899998 565544
Q ss_pred -EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 148 -ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 148 -~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
+.....|..+|..++..........+ .......+++.++|++.++.+. ++.+..||..+++
T Consensus 122 s~s~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~-----------------d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 122 TCSRDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASASY-----------------DDTVKLYREEEDD 183 (345)
T ss_dssp EEETTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEEEEET-----------------TSCEEEEEEETTE
T ss_pred EEECCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEEEEeC-----------------CCcEEEEEecCCC
Confidence 44445577777765432111111111 1124677889999987666533 4677778776665
Q ss_pred EE---EeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEe
Q 016318 227 TT---VLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWL 264 (391)
Q Consensus 227 ~~---~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~ 264 (391)
.. .+.......+.++++|++++|..+ ...+.|..++.
T Consensus 184 ~~~~~~~~~h~~~v~~l~~sp~g~~l~s~-s~D~~v~iW~~ 223 (345)
T 3fm0_A 184 WVCCATLEGHESTVWSLAFDPSGQRLASC-SDDRTVRIWRQ 223 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEEE
T ss_pred EEEEEEecCCCCceEEEEECCCCCEEEEE-eCCCeEEEecc
Confidence 32 233333456789999999966555 44555555543
No 221
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.21 E-value=0.00013 Score=74.13 Aligned_cols=157 Identities=11% Similarity=-0.054 Sum_probs=96.4
Q ss_pred CcceEEEccCCCeeEEEecC----------CEEEEEeCCc------eeEEEeecCCCcccCCCCCCcccccccc-CccCc
Q 016318 70 GPESMAFDPLGRGPYTGVAD----------GRILFWDGLK------WTDFAFTSNNRSELCNPKPIATSYLKNE-HICGR 132 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~----------g~I~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~ 132 (391)
...++++++||+.+++...+ ..|+.++.+. -... ... .....
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------------------~l~~~~~~~ 189 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR---------------------ELSDDAHRF 189 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE---------------------ESSCSCSSE
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee---------------------EEEecCCCc
Confidence 35678899999978777665 4677776542 1100 000 11233
Q ss_pred cceEEEecCCCcEEEEECC--------CCeEEEeCC-CC---eeEEceeccCCCcccCCcceeecCCCCEEEEeCCCccc
Q 016318 133 PLGLRFDKKTGDLYIADAY--------FGLMKVGPE-GG---LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQ 200 (391)
Q Consensus 133 P~gi~~d~~~g~L~V~d~~--------~gl~~~d~~-~g---~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~ 200 (391)
..++++++++..|+++... ..|+.+|.+ ++ +.+.+..... .....++..+||++|++...
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~----~~~~~~~~spdg~l~~~~~~---- 261 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE----EAIAQAEWAPDGSLIVATDR---- 261 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT----BCEEEEEECTTSCEEEEECT----
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC----ceEcceEECCCCeEEEEECC----
Confidence 4567888844446555432 248999988 56 4444433211 24567888999998887643
Q ss_pred chhheeeecccCCCceEEEEeCCCCeEEEeccCCC-C--------cceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 201 RRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQ-F--------PNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 201 ~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~-~--------~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
.+...|+++|.++++.+.+...-. . ...++++++++.++.+.....+||++++++
T Consensus 262 -----------~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 262 -----------TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp -----------TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTT
T ss_pred -----------CCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCC
Confidence 122379999998888777653211 1 346888899996655543345788887654
No 222
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.21 E-value=0.00068 Score=61.82 Aligned_cols=190 Identities=7% Similarity=-0.081 Sum_probs=110.8
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE-EEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY-IAD 149 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~-V~d 149 (391)
-.++++.++|+.+++++.|+.|..|+........... ...+....+++++ ++.++ .+.
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~~l~sgs 116 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE--------------------AHPDYIRSIAVHP-TKPYVLSGS 116 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECS-SSSEEEEEE
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe--------------------CCCCcEEEEEEcC-CCCEEEEEC
Confidence 3577888999999999999999999876222221111 1134467889998 55544 444
Q ss_pred CCCCeEEEeCCCC-eeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 150 AYFGLMKVGPEGG-LATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 150 ~~~gl~~~d~~~g-~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
....|..+|..++ ......... ......+++.+ ++.+.++.+. ++.+..||..+++.
T Consensus 117 ~D~~v~lWd~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~sgs~-----------------D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 117 DDLTVKLWNWENNWALEQTFEGH----EHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTP 175 (304)
T ss_dssp TTSCEEEEEGGGTTEEEEEECCC----CSCEEEEEECTTCTTEEEEEET-----------------TSEEEEEETTCSSC
T ss_pred CCCeEEEEECCCCcchhhhhccc----CCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEECCCCCc
Confidence 4455888887765 222221111 13467889988 5677666543 57888898765532
Q ss_pred E-Eecc-CCCCcceEEEcc--CCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCch
Q 016318 228 T-VLLR-NLQFPNGLSLSK--DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 228 ~-~~~~-~~~~~ngia~~~--d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~ 303 (391)
. .+.. .....+.+++.+ +++++. +-...+.|..+++...+ ....+....+....+++++++.+.++....+.+
T Consensus 176 ~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~s~D~~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i 252 (304)
T 2ynn_A 176 NFTLTTGQERGVNYVDYYPLPDKPYMI-TASDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTL 252 (304)
T ss_dssp SEEEECCCTTCEEEEEECCSTTCCEEE-EEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred cceeccCCcCcEEEEEEEEcCCCCEEE-EEcCCCeEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeE
Confidence 2 2221 123345566665 667554 44566788888765321 111221111223457788888877665555444
Q ss_pred hh
Q 016318 304 YS 305 (391)
Q Consensus 304 ~~ 305 (391)
.+
T Consensus 253 ~i 254 (304)
T 2ynn_A 253 KI 254 (304)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 223
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.20 E-value=0.00051 Score=63.80 Aligned_cols=155 Identities=12% Similarity=0.016 Sum_probs=89.4
Q ss_pred CccceEEEecCCCc-EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheee
Q 016318 131 GRPLGLRFDKKTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 131 g~P~gi~~d~~~g~-L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~ 207 (391)
+....+++++ +++ |.++.....|..++..++..+.+... .+ .......+++.++ +++.++.+.
T Consensus 12 ~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~~~l~s~~~----------- 77 (379)
T 3jrp_A 12 ELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTL-TG-HEGPVWRVDWAHPKFGTILASCSY----------- 77 (379)
T ss_dssp CCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEET-----------
T ss_pred ccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEe-cC-CCCcEEEEEeCCCCCCCEEEEecc-----------
Confidence 4567889998 555 44454444477777664433332211 11 1124577888765 777776543
Q ss_pred ecccCCCceEEEEeCCCCeEE---EeccCCCCcceEEEccC--CCEEEEEeCCCCeEEEEEeccccCccceeecccCCCC
Q 016318 208 VFSAEDTGRVLKYDPTTKQTT---VLLRNLQFPNGLSLSKD--KSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYP 282 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~~~~~---~~~~~~~~~ngia~~~d--~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p 282 (391)
+|.|..||..+++.. .+.........++++|+ ++.++++ +..+.|..+++..........+.......
T Consensus 78 ------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~v 150 (379)
T 3jrp_A 78 ------DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDAHAIGV 150 (379)
T ss_dssp ------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCTTSCCCEEEEECCTTCE
T ss_pred ------CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEe-cCCCcEEEEecCCCCceeeEEecCCCCce
Confidence 578888888877532 22233346778999999 8866655 55778888887653221222222222233
Q ss_pred CceEeCC-------------CCCEEEEEcCCCchhhh
Q 016318 283 DNVRTNE-------------KGEFWVAIHCRRSLYSH 306 (391)
Q Consensus 283 ~~i~~d~-------------~G~lwva~~~~~~~~~~ 306 (391)
..++.++ ++.+.++......+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~ 187 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 187 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEETTSCEEEE
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEE
Confidence 4566776 57766655554444443
No 224
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.19 E-value=0.0031 Score=60.67 Aligned_cols=181 Identities=13% Similarity=0.005 Sum_probs=105.1
Q ss_pred cCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCeEEE
Q 016318 78 PLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLMKV 157 (391)
Q Consensus 78 ~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl~~~ 157 (391)
.+++.+++++.||.|..|+....+...... ...+....+++.+ ++.|..+.....|..+
T Consensus 130 ~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~--------------------~h~~~V~~l~~~~-~~~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 130 FEDNYVITGADDKMIRVYDSINKKFLLQLS--------------------GHDGGVWALKYAH-GGILVSGSTDRTVRVW 188 (464)
T ss_dssp EETTEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEECS-TTEEEEEETTSCEEEE
T ss_pred ECCCEEEEEcCCCcEEEEECCCCcEEEEEe--------------------CCCcCEEEEEEcC-CCEEEEEeCCCCEEEE
Confidence 356779999999999999876323222211 1134567888887 5666666655669999
Q ss_pred eCCCCeeEEceeccCCCcccCCcceeec--CCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE-------
Q 016318 158 GPEGGLATSLATEAEGVPLRFTNDLDID--DEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT------- 228 (391)
Q Consensus 158 d~~~g~~~~~~~~~~~~~~~~~~~l~~d--~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~------- 228 (391)
|.++++........ ......+++. +++++.++.+. +|.+..||..+++..
T Consensus 189 d~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~~l~s~s~-----------------d~~i~vwd~~~~~~~~~~~~~~ 247 (464)
T 3v7d_B 189 DIKKGCCTHVFEGH----NSTVRCLDIVEYKNIKYIVTGSR-----------------DNTLHVWKLPKESSVPDHGEEH 247 (464)
T ss_dssp ETTTTEEEEEECCC----SSCEEEEEEEESSSCEEEEEEET-----------------TSCEEEEECCCCCCC------C
T ss_pred ECCCCcEEEEECCC----CCccEEEEEecCCCCCEEEEEcC-----------------CCcEEEeeCCCCcccccccccC
Confidence 99887644322211 1234556665 46665555432 467777877655421
Q ss_pred -----------------EeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCC
Q 016318 229 -----------------VLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKG 291 (391)
Q Consensus 229 -----------------~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G 291 (391)
.+.. ....-.+++++++.++.+ ...+.|..+++... .....+....+....++++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~-~~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~ 322 (464)
T 3v7d_B 248 DYPLVFHTPEENPYFVGVLRG--HMASVRTVSGHGNIVVSG-SYDNTLIVWDVAQM--KCLYILSGHTDRIYSTIYDHER 322 (464)
T ss_dssp CSSEEESCGGGCTTEEEEECC--CSSCEEEEEEETTEEEEE-ETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEETTT
T ss_pred CcceEeeccCCCeEEEEEccC--ccceEEEEcCCCCEEEEE-eCCCeEEEEECCCC--cEEEEecCCCCCEEEEEEcCCC
Confidence 1111 112223567888866665 55678888886532 1112222222334567888999
Q ss_pred CEEEEEcCCCchhh
Q 016318 292 EFWVAIHCRRSLYS 305 (391)
Q Consensus 292 ~lwva~~~~~~~~~ 305 (391)
+..++......+..
T Consensus 323 ~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 323 KRCISASMDTTIRI 336 (464)
T ss_dssp TEEEEEETTSCEEE
T ss_pred CEEEEEeCCCcEEE
Confidence 87666555544444
No 225
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.0009 Score=60.34 Aligned_cols=183 Identities=9% Similarity=-0.031 Sum_probs=100.7
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc-EEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V 147 (391)
..-.++++ ++++.+++++.+|.|..|+........... ...+....+++++ +++ |++
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~l~~ 76 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY--------------------TGQGFLNSVCYDS-EKELLLF 76 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE--------------------ECSSCEEEEEEET-TTTEEEE
T ss_pred CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee--------------------cCCccEEEEEECC-CCCEEEE
Confidence 34567888 888889999999999999866211111110 0134567889998 555 555
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
+.....+..++..............+ .......++. ++++.++.+. +|.+..|| .....
T Consensus 77 ~~~dg~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~~l~~~~~-----------------d~~i~~~d-~~~~~ 135 (313)
T 3odt_A 77 GGKDTMINGVPLFATSGEDPLYTLIG-HQGNVCSLSF--QDGVVISGSW-----------------DKTAKVWK-EGSLV 135 (313)
T ss_dssp EETTSCEEEEETTCCTTSCC-CEECC-CSSCEEEEEE--ETTEEEEEET-----------------TSEEEEEE-TTEEE
T ss_pred ecCCCeEEEEEeeecCCCCcccchhh-cccCEEEEEe--cCCEEEEEeC-----------------CCCEEEEc-CCcEE
Confidence 54444466676543311000000111 1123455666 4455554432 57888888 22333
Q ss_pred EEeccCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEeccccCccceeecc-cCCCCCceEeCCCCCEEEEEcC
Q 016318 228 TVLLRNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 228 ~~~~~~~~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~~G~lwva~~~ 299 (391)
..+.........+++.+ +++.++.+ ...+.|..++.. .....+.. ..+....++.+++|.+.++...
T Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d 204 (313)
T 3odt_A 136 YNLQAHNASVWDAKVVSFSENKFLTA-SADKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGHFISCSND 204 (313)
T ss_dssp EEEECCSSCEEEEEEEETTTTEEEEE-ETTSCEEEEETT----EEEEEECSSCSSCEEEEEEEETTEEEEEETT
T ss_pred EecccCCCceeEEEEccCCCCEEEEE-ECCCCEEEEecC----ceEEEEeccCcccEEEEEEcCCCeEEEccCC
Confidence 33333344566788877 88866655 556778877621 11222222 3334566888888885554433
No 226
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.19 E-value=0.00025 Score=65.51 Aligned_cols=101 Identities=12% Similarity=0.140 Sum_probs=62.8
Q ss_pred cCcceEEEccC---CCeeEEEecCCEEEEEeCCc-eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 69 QGPESMAFDPL---GRGPYTGVADGRILFWDGLK-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 69 ~gPe~i~~d~~---G~~ly~~~~~g~I~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
..-.+++++++ |+.++++..+|.|..|+... -...... .....+....+++++ +++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------~~~h~~~v~~~~~~~-~~~ 99 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKA-------------------QQMHTGPVLDVCWSD-DGS 99 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEE-------------------EEECSSCEEEEEECT-TSS
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEE-------------------eccccCCEEEEEECc-CCC
Confidence 45678999998 68899999999999987651 1111000 001134567899998 555
Q ss_pred -EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceee--cCCCCEEEEe
Q 016318 145 -LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDI--DDEGNVYFTD 194 (391)
Q Consensus 145 -L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~--d~~G~ly~td 194 (391)
|+.+.....|..+|..+++...+... . .....+++ .++|++.++.
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~~l~~~ 147 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQIAQH-D----APVKTIHWIKAPNYSCVMTG 147 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEC-S----SCEEEEEEEECSSCEEEEEE
T ss_pred EEEEEcCCCcEEEEEcCCCCceeeccc-c----CceEEEEEEeCCCCCEEEEc
Confidence 55555444488899988876554322 1 23556666 6676655543
No 227
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.16 E-value=0.00065 Score=69.61 Aligned_cols=194 Identities=9% Similarity=0.020 Sum_probs=117.8
Q ss_pred CcceEEEccC-CCeeEEEecCCEEEEEeCCc----eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 70 GPESMAFDPL-GRGPYTGVADGRILFWDGLK----WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 70 gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
.-.+|++.++ ++++.+++.|+.|..|+... ...... ......+...++++++ +++
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~-------------------~~~~h~~~v~~v~~s~-~g~ 443 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQR-------------------RLTGHSHFVEDVVLSS-DGQ 443 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEE-------------------EEECCSSCEEEEEECT-TSS
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccc-------------------eecCCCCcEEEEEECC-CCC
Confidence 3457777765 46788999999999997641 000000 0111234467889998 566
Q ss_pred EEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 145 LYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 145 L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
++++... ..|..+|..+++......... .....+++.++|+..++.+. ++.|..||..
T Consensus 444 ~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~-----------------D~~i~iwd~~ 502 (694)
T 3dm0_A 444 FALSGSWDGELRLWDLAAGVSTRRFVGHT----KDVLSVAFSLDNRQIVSASR-----------------DRTIKLWNTL 502 (694)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCS----SCEEEEEECTTSSCEEEEET-----------------TSCEEEECTT
T ss_pred EEEEEeCCCcEEEEECCCCcceeEEeCCC----CCEEEEEEeCCCCEEEEEeC-----------------CCEEEEEECC
Confidence 5554444 448888988875443222211 24678899999987776543 5788888876
Q ss_pred CCeEEEeccC----CCCcceEEEccCCC-EEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEc
Q 016318 224 TKQTTVLLRN----LQFPNGLSLSKDKS-FFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 224 ~~~~~~~~~~----~~~~ngia~~~d~~-~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~ 298 (391)
+.....+... ....+.++++|++. ..+++-+..+.|..+++...+ ....+....+....++++++|++.++..
T Consensus 503 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~--~~~~~~~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 503 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK--LRSTLAGHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--EEEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 5544444322 12356889999862 244554666788888765421 1122222234456788999999877766
Q ss_pred CCCchhhh
Q 016318 299 CRRSLYSH 306 (391)
Q Consensus 299 ~~~~~~~~ 306 (391)
..+.+.++
T Consensus 581 ~Dg~i~iw 588 (694)
T 3dm0_A 581 KDGVVLLW 588 (694)
T ss_dssp TTSBCEEE
T ss_pred CCCeEEEE
Confidence 65555444
No 228
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00012 Score=69.32 Aligned_cols=208 Identities=10% Similarity=0.097 Sum_probs=120.0
Q ss_pred CcceEEEccC-CCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 70 GPESMAFDPL-GRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 70 gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
...++++.++ ++.++++..+|.|..|+....... ... ...... .......+...++++++++++++++
T Consensus 115 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~-~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~l~~ 183 (416)
T 2pm9_A 115 SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTES---PSN-YTPLTP-------GQSMSSVDEVISLAWNQSLAHVFAS 183 (416)
T ss_dssp CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSC---TTT-CCCBCC-------CCSCCSSCCCCEEEECSSCTTEEEE
T ss_pred ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccc---ccc-cccccc-------ccccCCCCCeeEEEeCCCCCcEEEE
Confidence 4568899998 888899999999999977521100 000 000000 0011123556789999843666665
Q ss_pred ECCCC-eEEEeCCCCeeEEceeccCC--CcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEEEEeCCC
Q 016318 149 DAYFG-LMKVGPEGGLATSLATEAEG--VPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTT 224 (391)
Q Consensus 149 d~~~g-l~~~d~~~g~~~~~~~~~~~--~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 224 (391)
....| |..+|..+++.......... .....+..+++.++| +++++.+.. ...+.|..||..+
T Consensus 184 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------------~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 184 AGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS--------------DNDPSILIWDLRN 249 (416)
T ss_dssp ESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC--------------SSSCCCCEEETTS
T ss_pred EcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC--------------CCCceEEEEeCCC
Confidence 45444 89999988754332221100 002357889999987 566665320 0112788888876
Q ss_pred C-eE-EEec-cCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCC-CEEEEEcC
Q 016318 225 K-QT-TVLL-RNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKG-EFWVAIHC 299 (391)
Q Consensus 225 ~-~~-~~~~-~~~~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G-~lwva~~~ 299 (391)
+ +. ..+. ........++++| +++.++.+ ...+.|..+++... .....+....+....++++++| .++++...
T Consensus 250 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~-~~dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 250 ANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS-GRDNTVLLWNPESA--EQLSQFPARGNWCFKTKFAPEAPDLFACASF 326 (416)
T ss_dssp TTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE-ESSSEEEEECSSSC--CEEEEEECSSSCCCCEEECTTCTTEEEECCS
T ss_pred CCCCcEEeecCccCceeEEEeCCCCCCeEEEE-eCCCCEEEeeCCCC--ccceeecCCCCceEEEEECCCCCCEEEEEec
Confidence 5 22 2222 2334567899999 88855555 55678888876532 1122232233456788999998 67766555
Q ss_pred CCchhh
Q 016318 300 RRSLYS 305 (391)
Q Consensus 300 ~~~~~~ 305 (391)
...+.+
T Consensus 327 d~~i~i 332 (416)
T 2pm9_A 327 DNKIEV 332 (416)
T ss_dssp SSEEEE
T ss_pred CCcEEE
Confidence 444433
No 229
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.13 E-value=0.00059 Score=74.59 Aligned_cols=208 Identities=12% Similarity=0.095 Sum_probs=123.4
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCc--------ee-E--EEeec---------C-CCcccCCCCCCcccccccc
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLK--------WT-D--FAFTS---------N-NRSELCNPKPIATSYLKNE 127 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~--------~~-~--~~~~~---------~-~~~~~~~~~~~~~~~~~~~ 127 (391)
....++++.++|+.+++++.+|.|..|+... .. . ..... . .......... .. ...
T Consensus 883 ~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~ 958 (1249)
T 3sfz_A 883 SWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKT---GQ-IDY 958 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESS---CC-EEE
T ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCc---ce-EEE
Confidence 3567899999999899999999999987430 00 0 00000 0 0000000000 00 000
Q ss_pred CccCccceEEEecCCCcEEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheee
Q 016318 128 HICGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 128 ~~~g~P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~ 207 (391)
........+++++++..+.+++....|..++..+++........ ......++++++|+..++.+.
T Consensus 959 ~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h----~~~v~~l~~s~dg~~l~s~~~----------- 1023 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH----KKAVRHIQFTADGKTLISSSE----------- 1023 (1249)
T ss_dssp ECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC----SSCCCCEEECSSSSCEEEECS-----------
T ss_pred cccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC----CCceEEEEECCCCCEEEEEcC-----------
Confidence 01234567889884444556655556888998876543321111 235778999999987777643
Q ss_pred ecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEe
Q 016318 208 VFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRT 287 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~ 287 (391)
+|.+..||..+++.............+++++++. ++.+ +..+.|..+++...+ ....+....+....+++
T Consensus 1024 ------dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~-~~dg~v~vwd~~~~~--~~~~~~~~~~~v~~~~~ 1093 (1249)
T 3sfz_A 1024 ------DSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSR-LLSW-SFDGTVKVWNVITGR--IERDFTCHQGTVLSCAI 1093 (1249)
T ss_dssp ------SSBEEEEETTTTEEECCBCCSSCEEEEEECSSSE-EEEE-ESSSEEEEEETTTTC--CCEEEECCSSCCCCEEE
T ss_pred ------CCEEEEEECCCCceEEEecCCCcEEEEEEcCCCc-EEEE-ECCCcEEEEECCCCc--eeEEEcccCCcEEEEEE
Confidence 5789999999888765554445667889999886 4444 456788888865421 12233323345678899
Q ss_pred CCCCCEEEEEcCCCchhh
Q 016318 288 NEKGEFWVAIHCRRSLYS 305 (391)
Q Consensus 288 d~~G~lwva~~~~~~~~~ 305 (391)
+++|++.++......+..
T Consensus 1094 s~d~~~l~s~s~d~~v~i 1111 (1249)
T 3sfz_A 1094 SSDATKFSSTSADKTAKI 1111 (1249)
T ss_dssp CSSSSSCEEECCSSCCCE
T ss_pred CCCCCEEEEEcCCCcEEE
Confidence 999986665555444433
No 230
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.13 E-value=0.00066 Score=62.53 Aligned_cols=193 Identities=12% Similarity=-0.010 Sum_probs=107.5
Q ss_pred cCcceEEEccCCCeeE-EEec---CCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-
Q 016318 69 QGPESMAFDPLGRGPY-TGVA---DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK- 141 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly-~~~~---~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~- 141 (391)
....++++.++|..+. +++. +|.|..|+.. ........ ........++++++
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~---------------------~~~~~v~~~~~~~~~ 77 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI---------------------EKAKPIKCGTFGATS 77 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE---------------------EESSCEEEEECTTCC
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee---------------------cccCcEEEEEEcCCC
Confidence 3567899999986444 4554 8888888765 22212111 01234567888874
Q ss_pred --CCcEEEEECCCCeEEEeCCCCe--eEEceeccCCC--cccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 142 --TGDLYIADAYFGLMKVGPEGGL--ATSLATEAEGV--PLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 142 --~g~L~V~d~~~gl~~~d~~~g~--~~~~~~~~~~~--~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
+..|+++.....|..+|..+++ +..+... .+. .+.+..++++.++|+..++.+. +|
T Consensus 78 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~s~~~~~l~~~~~-----------------d~ 139 (357)
T 3i2n_A 78 LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGH-KEIINAIDGIGGLGIGEGAPEIVTGSR-----------------DG 139 (357)
T ss_dssp TTTCCEEEEETTSCEEEECTTSCSSCSEEECCC-SSCEEEEEEESGGGCC-CCCEEEEEET-----------------TS
T ss_pred CCCceEEEecCCCeEEEEeCCCCCccEEEEEec-ccceEEEeeccccccCCCccEEEEEeC-----------------CC
Confidence 2446666555568888988764 2222211 110 0112222356778877666533 57
Q ss_pred eEEEEeCCCCe--EEEeccCC----CCcceEE----EccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCce
Q 016318 216 RVLKYDPTTKQ--TTVLLRNL----QFPNGLS----LSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNV 285 (391)
Q Consensus 216 ~l~~~d~~~~~--~~~~~~~~----~~~ngia----~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i 285 (391)
.+..||..+++ ...+.... .....++ ++++++.++.+ ...+.|..+++... +........+....+
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~---~~~~~~~~~~~v~~~ 215 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG-YDNGDIKLFDLRNM---ALRWETNIKNGVCSL 215 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE-ETTSEEEEEETTTT---EEEEEEECSSCEEEE
T ss_pred eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE-ccCCeEEEEECccC---ceeeecCCCCceEEE
Confidence 88899987765 33332111 1334555 67899966655 55678999887643 222222233445678
Q ss_pred EeCC---CCCEEEEEcCCCchh
Q 016318 286 RTNE---KGEFWVAIHCRRSLY 304 (391)
Q Consensus 286 ~~d~---~G~lwva~~~~~~~~ 304 (391)
.+++ +|++.++......+.
T Consensus 216 ~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 216 EFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp EESCSSSSCCEEEEEESTTEEE
T ss_pred EcCCCCCCCCEEEEECCCCeEE
Confidence 8888 777665554444443
No 231
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.12 E-value=8.2e-05 Score=74.59 Aligned_cols=173 Identities=15% Similarity=-0.004 Sum_probs=98.7
Q ss_pred cceEEEccCCCeeEEEec-CCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 71 PESMAFDPLGRGPYTGVA-DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~-~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
..++++.+||+.+.+++. +|.+..|+.+ ....+.. ........+++++ +..+|.
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~----------------------~~~~~~~~~~~sp-d~~l~~ 80 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNR----------------------EPINSVLDPHYGV-GRVILV 80 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCS----------------------SCCSEECEECTTC-SEEEEE
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeec----------------------ccccccccccCCC-CeEEEE
Confidence 457889999997766554 7765555422 2111110 0012344566776 444566
Q ss_pred EEC--C-C--CeEEEeC--CCCeeEEceeccCCCcccCCcceeecCCC--CEEEEeCCCcccchhheeeecccCCCceEE
Q 016318 148 ADA--Y-F--GLMKVGP--EGGLATSLATEAEGVPLRFTNDLDIDDEG--NVYFTDSSTNYQRRNFMQLVFSAEDTGRVL 218 (391)
Q Consensus 148 ~d~--~-~--gl~~~d~--~~g~~~~~~~~~~~~~~~~~~~l~~d~~G--~ly~td~~~~~~~~~~~~~~~~~~~~g~l~ 218 (391)
++. . . .|+.++. +++.. .+.. .. .....++.++| .+|++... +.+.
T Consensus 81 ~~~~~g~~~~~l~~~~~~~~g~~~-~l~~-~~-----~~~~~~~s~dg~~~~~~s~~~------------------~~~~ 135 (582)
T 3o4h_A 81 RDVSKGAEQHALFKVNTSRPGEEQ-RLEA-VK-----PMRILSGVDTGEAVVFTGATE------------------DRVA 135 (582)
T ss_dssp EECSTTSCCEEEEEEETTSTTCCE-ECTT-SC-----SBEEEEEEECSSCEEEEEECS------------------SCEE
T ss_pred eccCCCCcceEEEEEeccCCCccc-cccC-CC-----CceeeeeCCCCCeEEEEecCC------------------CCce
Confidence 664 1 1 3777887 55433 3221 11 12234555555 34544422 4455
Q ss_pred EEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCC---CCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEE
Q 016318 219 KYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS---VGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWV 295 (391)
Q Consensus 219 ~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~---~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwv 295 (391)
.||.++++.+.+..... +.++++|||++|+.+... ...|+++++++ ++.+.+...++...++++++||+..+
T Consensus 136 l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~---g~~~~l~~~~~~~~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 136 LYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS---GGLRVFDSGEGSFSSASISPGMKVTA 210 (582)
T ss_dssp EEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTT---CCCEEECCSSCEEEEEEECTTSCEEE
T ss_pred EEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC---CCceEeecCCCccccceECCCCCEEE
Confidence 77888888777654333 789999999987755322 14688888765 33344433334456788999998555
Q ss_pred E
Q 016318 296 A 296 (391)
Q Consensus 296 a 296 (391)
+
T Consensus 211 ~ 211 (582)
T 3o4h_A 211 G 211 (582)
T ss_dssp E
T ss_pred E
Confidence 3
No 232
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.12 E-value=0.00053 Score=64.73 Aligned_cols=156 Identities=15% Similarity=0.113 Sum_probs=101.1
Q ss_pred ceEEEcc-CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 72 ESMAFDP-LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 72 e~i~~d~-~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
.++++.+ +++.+.+++.|+.|..|+.. ....+.. .....+....+++++ +++++++.
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~--------------------~~~h~~~v~~v~~~p-~~~~l~s~ 267 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT--------------------YHGHEGDINSVKFFP-DGQRFGTG 267 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE--------------------ECCCSSCCCEEEECT-TSSEEEEE
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE--------------------ECCcCCCeEEEEEec-CCCeEEEE
Confidence 3556655 78888999999999999864 1111110 111134567899998 66665554
Q ss_pred CCC-CeEEEeCCCCeeEEceeccC---CCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCC
Q 016318 150 AYF-GLMKVGPEGGLATSLATEAE---GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 150 ~~~-gl~~~d~~~g~~~~~~~~~~---~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
... .|..+|..+++......... .........+++.++|.+.++.+. +|.+..||..++
T Consensus 268 s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-----------------dg~i~vwd~~~~ 330 (380)
T 3iz6_a 268 SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-----------------NGDCYVWDTLLA 330 (380)
T ss_dssp CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-----------------TSCEEEEETTTC
T ss_pred cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-----------------CCCEEEEECCCC
Confidence 444 48889998875443222111 112235678999999998887654 588999998877
Q ss_pred eEEEecc-----CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 226 QTTVLLR-----NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 226 ~~~~~~~-----~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
+...... .....+.++++||+++|. +-...+.|..+++.+
T Consensus 331 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 331 EMVLNLGTLQNSHEGRISCLGLSSDGSALC-TGSWDKNLKIWAFSG 375 (380)
T ss_dssp CEEEEECCSCSSCCCCCCEEEECSSSSEEE-EECTTSCEEEEECCS
T ss_pred ceEEEEecccCCCCCceEEEEECCCCCEEE-EeeCCCCEEEEecCC
Confidence 6543321 223567899999999554 446667777777665
No 233
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.00041 Score=72.01 Aligned_cols=195 Identities=12% Similarity=0.061 Sum_probs=117.5
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-CCcE-
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGDL- 145 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~-~g~L- 145 (391)
.-.+++++++|+.++++..+|.|..|+.. ......... ...+...+++++++ ++++
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~--------------------~h~~~V~~l~~s~~~~~~~l 70 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--------------------GHEGPVWRVDWAHPKFGTIL 70 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC--------------------CCSSCEEEEEECCTTSCSEE
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc--------------------CCcCceEEEEecCCCCCCEE
Confidence 45678899999989999999999998754 222222111 11344678888763 1554
Q ss_pred EEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 146 ~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
..+...+.|..+|..+++......... ....+..+++.++ |++.++.+. +|.+..||..
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sgs~-----------------dg~I~vwdl~ 131 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFK 131 (753)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECC
T ss_pred EEEeCCCeEEEEECCCCcccccccccC--CCCCeEEEEECCCCCCCEEEEEeC-----------------CCcEEEEEee
Confidence 445444458888888775433322111 1235678889888 877776643 5788889887
Q ss_pred CCe---EEEeccCCCCcceEEEcc-------------CCCEEEEEeCCCCeEEEEEeccccCccceeecc---cCCCCCc
Q 016318 224 TKQ---TTVLLRNLQFPNGLSLSK-------------DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI---LPGYPDN 284 (391)
Q Consensus 224 ~~~---~~~~~~~~~~~ngia~~~-------------d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~---~~g~p~~ 284 (391)
++. ...+.........++++| |++.++.+ ...+.|..+++..... ....... ..+....
T Consensus 132 ~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg-s~dg~I~iwd~~~~~~-~~~~~~~~~~h~~~V~~ 209 (753)
T 3jro_A 132 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQ-TYVLESTLEGHSDWVRD 209 (753)
T ss_dssp SSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE-ETTSCEEEEEEETTTT-EEEEEEEECCCSSCEEE
T ss_pred cCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE-ECCCeEEEEeccCCcc-cceeeeeecCCCCcEEE
Confidence 652 222323334567888888 57756555 5567788887764321 1111112 2234466
Q ss_pred eEeCCC---CCEEEEEcCCCchhh
Q 016318 285 VRTNEK---GEFWVAIHCRRSLYS 305 (391)
Q Consensus 285 i~~d~~---G~lwva~~~~~~~~~ 305 (391)
++++++ |++.++......+..
T Consensus 210 l~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 210 VAWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp EEECCCCSSSEEEEEEESSSCEEE
T ss_pred EEeccCCCCCCEEEEEecCCEEEE
Confidence 888888 776666555444433
No 234
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.08 E-value=0.0011 Score=71.30 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=92.8
Q ss_pred cceEEEccCCCeeEEEecCCEEE-EEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRIL-FWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
..++++. +|+.+++.+.+++++ .++.. ....+ ......+..+++++++..|++
T Consensus 340 ~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l-----------------------~~~~~~~~~~~~SpDG~~la~ 395 (1045)
T 1k32_A 340 YVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF-----------------------EENLGNVFAMGVDRNGKFAVV 395 (1045)
T ss_dssp EEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC-----------------------CCCCCSEEEEEECTTSSEEEE
T ss_pred EEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEe-----------------------cCCccceeeeEECCCCCEEEE
Confidence 3355666 776666666666777 66654 11111 011345678899994444666
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCc-ccchhheeeecccCCCceEEEEeCCCCe
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTN-YQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~-~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
+.....|+.+|.++++.+.+..... .....+++++||+..+..+... +. ......+.|+.+|.++++
T Consensus 396 ~~~~~~v~~~d~~tg~~~~~~~~~~----~~v~~~~~SpDG~~la~~~~~~~~~--------~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 396 ANDRFEIMTVDLETGKPTVIERSRE----AMITDFTISDNSRFIAYGFPLKHGE--------TDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSS----SCCCCEEECTTSCEEEEEEEECSST--------TCSCCEEEEEEEETTTTE
T ss_pred ECCCCeEEEEECCCCceEEeccCCC----CCccceEECCCCCeEEEEecCcccc--------ccCCCCCeEEEEECCCCc
Confidence 6555569999999988776643222 2357889999997444332100 00 001123579999999988
Q ss_pred EEEeccCCCCcceEEEccCCCEEEEEeC
Q 016318 227 TTVLLRNLQFPNGLSLSKDKSFFVFCEG 254 (391)
Q Consensus 227 ~~~~~~~~~~~ngia~~~d~~~l~v~et 254 (391)
...+.........++++|||+.|+++..
T Consensus 464 ~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 464 IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 7776665566778999999998887754
No 235
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.07 E-value=0.00027 Score=66.43 Aligned_cols=164 Identities=14% Similarity=0.081 Sum_probs=102.6
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE-EE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YI 147 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L-~V 147 (391)
....++++.++| .++++..+|.|..|+......+...... . ..+........+++++ ++++ ++
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~---------~h~~~~~~i~~i~~~~-~~~~l~~ 250 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ-----H---------SMINNSNSIRSVKFSP-QGSLLAI 250 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC-----C------------CCCCCEEEEEECS-STTEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc-----c---------cccccCCccceEEECC-CCCEEEE
Confidence 357789999999 8999999999999987632222211100 0 0000024467889998 5554 44
Q ss_pred EECC---CCeEEEeCCCCeeEEceec-cC-C-------CcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 148 ADAY---FGLMKVGPEGGLATSLATE-AE-G-------VPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 148 ~d~~---~gl~~~d~~~g~~~~~~~~-~~-~-------~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
+... ..|..+|..+++....... .. . .....+..+++.++|++.++.+. +|
T Consensus 251 ~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------dg 313 (397)
T 1sq9_A 251 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-----------------DG 313 (397)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-----------------TS
T ss_pred EecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-----------------CC
Confidence 4443 3488889877653322111 00 0 01235678899999987776543 57
Q ss_pred eEEEEeCCCCeEEEecc------C----------------CCCcceEEEccCC----------CEEEEEeCCCCeEEEEE
Q 016318 216 RVLKYDPTTKQTTVLLR------N----------------LQFPNGLSLSKDK----------SFFVFCEGSVGRLHKYW 263 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~------~----------------~~~~ngia~~~d~----------~~l~v~et~~~~I~~~~ 263 (391)
.|..||..+++...... . ....+.++++|++ +.++.+ ...+.|..++
T Consensus 314 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~-~~dg~i~iw~ 392 (397)
T 1sq9_A 314 KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV-CLDRSIRWFR 392 (397)
T ss_dssp EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEE-ETTTEEEEEE
T ss_pred eEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEe-cCCCcEEEEE
Confidence 89999998876544433 2 3456789999998 545444 5567888877
Q ss_pred ecc
Q 016318 264 LIG 266 (391)
Q Consensus 264 ~~g 266 (391)
+++
T Consensus 393 ~~~ 395 (397)
T 1sq9_A 393 EAG 395 (397)
T ss_dssp EEC
T ss_pred cCC
Confidence 654
No 236
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.07 E-value=0.0065 Score=55.35 Aligned_cols=187 Identities=12% Similarity=0.041 Sum_probs=108.7
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
....++++.++|+.++++..|+.|..++........... ........+.+.+.+..|+.+
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~s~ 146 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--------------------GHTKDVLSVAFSSDNRQIVSG 146 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEECTTSSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec--------------------CCCCceeEEEEeecCccceee
Confidence 356788999999999999999999998877222211111 012233445566633445555
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
.....+..+|..+......... + .......+++.++ ..+.++.+. ++.+..||..+++
T Consensus 147 s~d~~~~~~d~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~~~~~s~~~-----------------d~~i~i~d~~~~~ 206 (340)
T 4aow_A 147 SRDKTIKLWNTLGVCKYTVQDE--S-HSEWVSCVRFSPNSSNPIIVSCGW-----------------DKLVKVWNLANCK 206 (340)
T ss_dssp ETTSCEEEECTTSCEEEEECSS--S-CSSCEEEEEECSCSSSCEEEEEET-----------------TSCEEEEETTTTE
T ss_pred cCCCeEEEEEeCCCceEEEEec--c-ccCcccceEEccCCCCcEEEEEcC-----------------CCEEEEEECCCCc
Confidence 5555577778765543322111 1 1123455566554 345555432 4678889988887
Q ss_pred EEEeccC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcC
Q 016318 227 TTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 227 ~~~~~~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
......+ -...+.++++||++.++.+ ...+.|..+++...+ ....+ ........+...+++.+.++...
T Consensus 207 ~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~Dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~~~~~d 276 (340)
T 4aow_A 207 LKTNHIGHTGYLNTVTVSPDGSLCASG-GKDGQAMLWDLNEGK--HLYTL-DGGDIINALCFSPNRYWLCAATG 276 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE-ETTCEEEEEETTTTE--EEEEE-ECSSCEEEEEECSSSSEEEEEET
T ss_pred eeeEecCCCCcEEEEEECCCCCEEEEE-eCCCeEEEEEeccCc--eeeee-cCCceEEeeecCCCCceeeccCC
Confidence 6554433 3356789999999966555 556788888765321 11111 11223345677787776665443
No 237
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.06 E-value=0.00067 Score=62.26 Aligned_cols=194 Identities=13% Similarity=-0.011 Sum_probs=105.5
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-CCc-E
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGD-L 145 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~-~g~-L 145 (391)
.-.+++++++|+.+.+++.|+.|..|+.. ........ ....+....+++.+. +++ |
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l--------------------~gH~~~V~~v~~~~~~~~~~l 74 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL--------------------RGHEGPVWQVAWAHPMYGNIL 74 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEE--------------------ECCSSCEEEEEECCGGGSSCE
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEE--------------------cCCCccEEEEEeCCCCCCCEE
Confidence 34578999999999999999999888754 11111111 011244667888642 244 5
Q ss_pred EEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 146 ~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
..+.....|..+|..+++.+..... .+ .....+.+++.++ |.+.++.+. ++.+..||..
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~~~~-~~-h~~~V~~v~~~p~~~g~~lasgs~-----------------D~~i~lwd~~ 135 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKSHEH-AG-HDSSVNSVCWAPHDYGLILACGSS-----------------DGAISLLTYT 135 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEEEEE-CC-CSSCCCEEEECCTTTCSCEEEECS-----------------SSCEEEEEEC
T ss_pred EEEECCCEEEEEECCCCcceEEEEc-cC-CCCceEEEEECCCCCCcEEEEEcC-----------------CCCEEEEecC
Confidence 5555455588888887643222111 11 1135788899886 666666543 4677777766
Q ss_pred CCe-EEEe--c-cCCCCcceEEEccC-----------------CCEEEEEeCCCCeEEEEEeccccCccceeecccCC--
Q 016318 224 TKQ-TTVL--L-RNLQFPNGLSLSKD-----------------KSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG-- 280 (391)
Q Consensus 224 ~~~-~~~~--~-~~~~~~ngia~~~d-----------------~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g-- 280 (391)
++. .... . ......+.++++|+ ++ .+++-...+.|..+++... +..+....+.+
T Consensus 136 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~--~~~~~~~~l~~h~ 212 (316)
T 3bg1_A 136 GEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEED--GQWKEEQKLEAHS 212 (316)
T ss_dssp SSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTT--SCEEEEECCBCCS
T ss_pred CCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCC--CccceeeecccCC
Confidence 542 2211 1 11123456777776 24 3444344556666665432 11112222222
Q ss_pred -CCCceEeCCCC----CEEEEEcCCCchhh
Q 016318 281 -YPDNVRTNEKG----EFWVAIHCRRSLYS 305 (391)
Q Consensus 281 -~p~~i~~d~~G----~lwva~~~~~~~~~ 305 (391)
....+++++++ ++.++......+.+
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred CceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 34557777775 55555444444433
No 238
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.06 E-value=0.0014 Score=65.22 Aligned_cols=188 Identities=12% Similarity=0.123 Sum_probs=114.1
Q ss_pred cceEEEcc--CCCeeEEEecCCEEEEEeCC-c-------eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec
Q 016318 71 PESMAFDP--LGRGPYTGVADGRILFWDGL-K-------WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (391)
Q Consensus 71 Pe~i~~d~--~G~~ly~~~~~g~I~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~ 140 (391)
..++++.+ +|+.++++..+|.|..|+.. . ....... ....+....+++++
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~--------------------~~~~~~v~~~~~s~ 126 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF--------------------QVLAGPISDISWDF 126 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE--------------------ECCSSCEEEEEECT
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchh--------------------hcccccEEEEEEeC
Confidence 57899999 99999999999999988763 1 1111111 11134567899998
Q ss_pred CCCcEEEEECCC----CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCc
Q 016318 141 KTGDLYIADAYF----GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 141 ~~g~L~V~d~~~----gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
++..|.++.... .|+.+| .+..+..+.. .......+++.++|. +.++.+. ++
T Consensus 127 ~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~-----------------d~ 183 (615)
T 1pgu_A 127 EGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSG-----HSQRINACHLKQSRPMRSMTVGD-----------------DG 183 (615)
T ss_dssp TSSEEEEEECCSSCSEEEEETT-TCCEEEECCS-----CSSCEEEEEECSSSSCEEEEEET-----------------TT
T ss_pred CCCEEEEeccCCCCccEEEEEE-CCCcceeeec-----CCccEEEEEECCCCCcEEEEEeC-----------------CC
Confidence 433455554332 366666 2233333321 123567889999986 5555432 57
Q ss_pred eEEEEeCCCCeEEEeccC-CC---CcceEEEccC-CCEEEEEeCCCCeEEEEEeccccCccceee-c---ccCCCCCceE
Q 016318 216 RVLKYDPTTKQTTVLLRN-LQ---FPNGLSLSKD-KSFFVFCEGSVGRLHKYWLIGEKAGNLEAF-A---ILPGYPDNVR 286 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~-~~---~~ngia~~~d-~~~l~v~et~~~~I~~~~~~g~~~g~~~~~-~---~~~g~p~~i~ 286 (391)
.+..||..+++....... .. ..+.++++|+ ++.++.+ +..+.|..+++...+ ....+ . ...+....+.
T Consensus 184 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~ 260 (615)
T 1pgu_A 184 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITV-GSDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALS 260 (615)
T ss_dssp EEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEE-ETTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEE
T ss_pred cEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEE-eCCCeEEEEECCCCC--EeEEecccccccCCceEEEE
Confidence 899999888766544433 23 4678999999 9866655 456788888865321 11222 1 1223345678
Q ss_pred eCCCCCEEEEEcCCCchhh
Q 016318 287 TNEKGEFWVAIHCRRSLYS 305 (391)
Q Consensus 287 ~d~~G~lwva~~~~~~~~~ 305 (391)
++ +|+++++......+..
T Consensus 261 ~~-~~~~l~~~~~d~~i~~ 278 (615)
T 1pgu_A 261 WL-DSQKFATVGADATIRV 278 (615)
T ss_dssp ES-SSSEEEEEETTSEEEE
T ss_pred Ec-CCCEEEEEcCCCcEEE
Confidence 88 8886666555444433
No 239
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.06 E-value=0.00087 Score=68.04 Aligned_cols=152 Identities=13% Similarity=0.011 Sum_probs=89.2
Q ss_pred cCCCc-EEEEEC-CCCeEEEeCC--C-CeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCC
Q 016318 140 KKTGD-LYIADA-YFGLMKVGPE--G-GLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 140 ~~~g~-L~V~d~-~~gl~~~d~~--~-g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
++++. |+++.. ...|+.++.+ + +..+.+.............++++++||+ |+++..... . ......
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~-~-------~~~~~~ 159 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFT-G-------EGPSDV 159 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEEC-S-------SSTTCE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEeccc-C-------CCCCCc
Confidence 64455 555543 3459999987 5 6666554321100112456789999996 554431100 0 000012
Q ss_pred CceEEEEeCCC------CeEEEec-cCCCCcceEEEccCCCEEEEEeCCC-------CeEEEEEecc-ccCccceeecc-
Q 016318 214 TGRVLKYDPTT------KQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-------GRLHKYWLIG-EKAGNLEAFAI- 277 (391)
Q Consensus 214 ~g~l~~~d~~~------~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~-------~~I~~~~~~g-~~~g~~~~~~~- 277 (391)
...|+.+|.++ ++.+.+. ........++++|||++|+++.... ..|+.+++++ .+.++...+..
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 25799999988 7777776 5555667889999999887765332 4799999873 21113333322
Q ss_pred cCCCCCceEeCCCCCEEEEEcC
Q 016318 278 LPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 278 ~~g~p~~i~~d~~G~lwva~~~ 299 (391)
..+.+..++.+++|++++....
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECT
T ss_pred CCceEcceEECCCCeEEEEECC
Confidence 1234556788889986655443
No 240
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.0077 Score=55.42 Aligned_cols=191 Identities=11% Similarity=-0.022 Sum_probs=101.6
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE-E
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI-A 148 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V-~ 148 (391)
.+++++++ ++.++..|+.|..|+.. ......... .....+....+++++ ++++++ +
T Consensus 18 ~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~------------------~~~h~~~v~~v~~sp-~~~~las~ 76 (330)
T 2hes_X 18 WSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLD------------------ETAHKKAIRSVAWRP-HTSLLAAG 76 (330)
T ss_dssp EEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEEC------------------TTCCCSCEEEEEECT-TSSEEEEE
T ss_pred eeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEe------------------cCCccCCEEEEEECC-CCCEEEEE
Confidence 46677665 68999999999998765 122221110 000124467899998 566554 4
Q ss_pred ECCCCeEEEeCCCCe-----eEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 149 DAYFGLMKVGPEGGL-----ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 149 d~~~gl~~~d~~~g~-----~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
.....|..++..+.. .+.+. ...+ .......+++.++|++.++.+. ++.+..||..
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~-~~~~-h~~~V~~v~~sp~g~~las~s~-----------------D~~v~iwd~~ 137 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLA-IIEG-HENEVKGVAWSNDGYYLATCSR-----------------DKSVWIWETD 137 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEE-EEC-----CEEEEEECTTSCEEEEEET-----------------TSCEEEEECC
T ss_pred eCCCcEEEEEcccCcCccccceeEE-EEcC-CCCcEEEEEECCCCCEEEEEeC-----------------CCEEEEEecc
Confidence 434447777764321 11111 1111 1134678999999987777643 5778888873
Q ss_pred -CC---e-EEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCC--CCEEEE
Q 016318 224 -TK---Q-TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEK--GEFWVA 296 (391)
Q Consensus 224 -~~---~-~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~--G~lwva 296 (391)
.+ + ...+.......+.++++|+++.|..+ ...+.|..++...........+....+....+.++++ +...++
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~-s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASS-SYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEE-ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEE-cCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence 22 2 22333333456789999999955444 5556666665432110111122212223345667776 544444
Q ss_pred EcCCCch
Q 016318 297 IHCRRSL 303 (391)
Q Consensus 297 ~~~~~~~ 303 (391)
......+
T Consensus 217 ~s~D~~v 223 (330)
T 2hes_X 217 GSDDSTV 223 (330)
T ss_dssp EETTSCE
T ss_pred EeCCCeE
Confidence 4444343
No 241
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.0027 Score=58.77 Aligned_cols=192 Identities=9% Similarity=-0.008 Sum_probs=108.9
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec--CCCcEEEEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK--KTGDLYIAD 149 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~--~~g~L~V~d 149 (391)
.++.+.++ +.+++.|+.|..|+.+.-.......... .. ..... ...+....+++++ ++..+..+.
T Consensus 80 ~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~--~~-------~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s 146 (343)
T 3lrv_A 80 RTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK--VL-------REIEV-DSANEIIYMYGHNEVNTEYFIWAD 146 (343)
T ss_dssp CTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC--EE-------EEEEC-CCSSCEEEEECCC---CCEEEEEE
T ss_pred eeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc--ee-------EEeec-CCCCCEEEEEcCCCCCCCEEEEEe
Confidence 34444444 7778888888888766211111110000 00 00000 0123466788876 444455465
Q ss_pred CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE-
Q 016318 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT- 228 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~- 228 (391)
....|..+|..+++........ .......+++.++|.+.++.+. +|.|..||..+++..
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~~~---~~~~i~~~~~~pdg~~lasg~~-----------------dg~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHSAK---SDVEYSSGVLHKDSLLLALYSP-----------------DGILDVYNLSSPDQAS 206 (343)
T ss_dssp TTCCEEEEESSSSCEEEEECCC---SSCCCCEEEECTTSCEEEEECT-----------------TSCEEEEESSCTTSCC
T ss_pred CCCcEEEEECCCCcEEEEEecC---CCCceEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCCCCc
Confidence 5556889999887653332111 1224788999999998887543 578999999887654
Q ss_pred -Eecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccC-ccceeecccCCCC---CceEeCCCCCEEEEEcC
Q 016318 229 -VLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA-GNLEAFAILPGYP---DNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 229 -~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~-g~~~~~~~~~g~p---~~i~~d~~G~lwva~~~ 299 (391)
.+.. .....+.++++|+++++..+. . +.|..+++...+. ...+.+.. ...+ ..++++++|.+.++...
T Consensus 207 ~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 207 SRFPVDEEAKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVGTLAYPTYTI-PEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp EECCCCTTSCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTTCBSSCCCBC------CCEEEEECTTSSEEEEEET
T ss_pred cEEeccCCCCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCcceeeccccc-ccccccceEEEECCCCCEEEEecC
Confidence 3333 245667999999999776665 3 3888888764321 11111110 1122 23899999997766433
No 242
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.03 E-value=0.00075 Score=61.73 Aligned_cols=191 Identities=14% Similarity=0.167 Sum_probs=112.9
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC-CcEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT-GDLYIA 148 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~-g~L~V~ 148 (391)
....+.+.++++.++++..|+.+..++........... .........+++..+. +.++++
T Consensus 130 ~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 130 DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-------------------ESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS-------------------SSCSSCEEEEEECSCSSSCEEEE
T ss_pred ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEe-------------------ccccCcccceEEccCCCCcEEEE
Confidence 44556667788878888999988888765222211110 0012334456665532 334444
Q ss_pred ECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 149 DAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 149 d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
... ..|..+|..+++........ ....+.++++++|++.++.+. +|.+..||..+++.
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~s~-----------------Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGH----TGYLNTVTVSPDGSLCASGGK-----------------DGQAMLWDLNEGKH 249 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEEET-----------------TCEEEEEETTTTEE
T ss_pred EcCCCEEEEEECCCCceeeEecCC----CCcEEEEEECCCCCEEEEEeC-----------------CCeEEEEEeccCce
Confidence 333 44888888877654332221 124678999999988777643 57899999988876
Q ss_pred EEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccC-ccc--eee-cc---cCCCCCceEeCCCCCEEEEEcCC
Q 016318 228 TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA-GNL--EAF-AI---LPGYPDNVRTNEKGEFWVAIHCR 300 (391)
Q Consensus 228 ~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~-g~~--~~~-~~---~~g~p~~i~~d~~G~lwva~~~~ 300 (391)
......-...+.++++|++.++..+ ..+.|..+++.+... ... +.. .. .++....++++++|++.++....
T Consensus 250 ~~~~~~~~~v~~~~~~~~~~~~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 250 LYTLDGGDIINALCFSPNRYWLCAA--TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEE--ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred eeeecCCceEEeeecCCCCceeecc--CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 5555555567788999998844433 356788887664311 000 000 01 11223457889999977765544
Q ss_pred Cc
Q 016318 301 RS 302 (391)
Q Consensus 301 ~~ 302 (391)
..
T Consensus 328 g~ 329 (340)
T 4aow_A 328 NL 329 (340)
T ss_dssp SC
T ss_pred CE
Confidence 33
No 243
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.0015 Score=64.99 Aligned_cols=183 Identities=9% Similarity=0.040 Sum_probs=110.8
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
....++++.|+|..+-+++.+|.+..|+.+. .+.... .. ... .....+.++|++++..|+++
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~--------------~~~-~~~sv~svafSPDG~~LAsg 147 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SK--------------GNL-SSRTYHCFEWNPIESSIVVG 147 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CS--------------SCS-TTTCEEEEEECSSSSCEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CC--------------Ccc-ccccEEEEEEcCCCCEEEEE
Confidence 3567899999999899999999999998653 111111 00 000 01235689999955567777
Q ss_pred ECCCCeEEEeCCCCee--------EEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 149 DAYFGLMKVGPEGGLA--------TSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~--------~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
...+.|..+|.+++.. +.+.....+ .......++..++| + ++.++ ++.+..|
T Consensus 148 s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg-L-aass~-----------------D~tVrlW 207 (588)
T 2j04_A 148 NEDGELQFFSIRKNSENTPEFYFESSIRLSDAG-SKDWVTHIVWYEDV-L-VAALS-----------------NNSVFSM 207 (588)
T ss_dssp ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTT-CCCCEEEEEEETTE-E-EEEET-----------------TCCEEEE
T ss_pred cCCCEEEEEECCCCccccccceeeeeeeccccc-ccccEEEEEEcCCc-E-EEEeC-----------------CCeEEEE
Confidence 6666688889887742 333211222 23578899999999 4 44332 4678888
Q ss_pred eCCCCeE----EEecc-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCCCCceEe--CCCCC
Q 016318 221 DPTTKQT----TVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRT--NEKGE 292 (391)
Q Consensus 221 d~~~~~~----~~~~~-~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~~i~~--d~~G~ 292 (391)
|..+++. ..+.. .-.....++++ ++.+..+ . .+.|..+++.+. +...+. ...+...+|++ +++|.
T Consensus 208 d~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa-~-~~tIkLWd~~~~---~~~~~~~gh~~~V~~va~~~s~d~~ 280 (588)
T 2j04_A 208 TVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLT-C-PGYVHKIDLKNY---SISSLKTGSLENFHIIPLNHEKEST 280 (588)
T ss_dssp CCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEE-C-SSEEEEEETTTT---EEEEEECSCCSCCCEEEETTCSSCE
T ss_pred ECCCCccccceeeecccccCcEEEEEEE--CCEEEEE-e-CCeEEEEECCCC---eEEEEEcCCCceEEEEEeeeCCCCC
Confidence 8877663 22322 22457789998 4645544 3 478999987753 222222 22233445666 66665
Q ss_pred EEEE
Q 016318 293 FWVA 296 (391)
Q Consensus 293 lwva 296 (391)
..+.
T Consensus 281 ~La~ 284 (588)
T 2j04_A 281 ILLM 284 (588)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 244
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.00 E-value=0.0013 Score=62.80 Aligned_cols=165 Identities=9% Similarity=0.058 Sum_probs=98.4
Q ss_pred ccCcceEEEccCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC-cE
Q 016318 68 IQGPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG-DL 145 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g-~L 145 (391)
-....++++.++|+.+.++ .|+.|..|+.. .-..+...... + ............+++++ ++ ++
T Consensus 177 ~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~------~-------~~~~~~~~~v~~~~~~p-~~~~~ 241 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIK------P-------ANMEELTEVITAAEFHP-NSCNT 241 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECC------C-------SSGGGCCCCEEEEEECS-SCTTE
T ss_pred CcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecc------c-------ccccccCcceEEEEECC-CCCcE
Confidence 3456789999999977777 89999999887 22222111000 0 01111235577899998 44 55
Q ss_pred EE-EECCCCeEEEeCCCCee-----EEceeccCCCc-------ccCCcceeecCCCCEEEEeCCCcccchhheeeecccC
Q 016318 146 YI-ADAYFGLMKVGPEGGLA-----TSLATEAEGVP-------LRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAE 212 (391)
Q Consensus 146 ~V-~d~~~gl~~~d~~~g~~-----~~~~~~~~~~~-------~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~ 212 (391)
++ +.....|..+|..+++. ..+........ ......+++.++|++.++.+
T Consensus 242 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------------- 304 (447)
T 3dw8_B 242 FVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD----------------- 304 (447)
T ss_dssp EEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-----------------
T ss_pred EEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-----------------
Confidence 44 44444588899887653 33321111000 01567899999998777652
Q ss_pred CCceEEEEeCCC-CeEEEeccCCCC----------------cceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 213 DTGRVLKYDPTT-KQTTVLLRNLQF----------------PNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 213 ~~g~l~~~d~~~-~~~~~~~~~~~~----------------~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
.+.+..||..+ ++.......... ...++++||+++| ++-...+.|..+++..
T Consensus 305 -~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 305 -YLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNT 373 (447)
T ss_dssp -SSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTT
T ss_pred -CCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCC
Confidence 16788888865 432111111111 1238999999966 4546778898888764
No 245
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.00 E-value=0.00015 Score=78.17 Aligned_cols=180 Identities=13% Similarity=0.051 Sum_probs=112.9
Q ss_pred CcceEEEc-cCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccC-ccceEEEecCCCcEEE
Q 016318 70 GPESMAFD-PLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICG-RPLGLRFDKKTGDLYI 147 (391)
Q Consensus 70 gPe~i~~d-~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~P~gi~~d~~~g~L~V 147 (391)
...+++++ ++|+.+.++. ++.|+.++...-.... .. ...+ .+..++++ ++..|+.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~--------------------~~~~~~~~~~~~s-dg~~l~~ 353 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VP--------------------EPLRIRYVRRGGD-TKVAFIH 353 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CS--------------------CCSCEEEEEECSS-SEEEEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-cc--------------------CCCcceEEeeeEc-CCCeEEE
Confidence 47789999 9998665555 7788888765211111 00 0112 44566666 4455666
Q ss_pred EECCCCeE-EEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 148 ADAYFGLM-KVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 148 ~d~~~gl~-~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
+.....++ .++..+++.+.+. .. ...+..+++++||+..++.+. .+.++.+|.++++
T Consensus 354 ~s~~~~l~~~~d~~~~~~~~l~-~~----~~~~~~~~~SpDG~~la~~~~-----------------~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 354 GTREGDFLGIYDYRTGKAEKFE-EN----LGNVFAMGVDRNGKFAVVAND-----------------RFEIMTVDLETGK 411 (1045)
T ss_dssp EETTEEEEEEEETTTCCEEECC-CC----CCSEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTCC
T ss_pred EECCCceEEEEECCCCCceEec-CC----ccceeeeEECCCCCEEEEECC-----------------CCeEEEEECCCCc
Confidence 55545688 8898888766654 11 135678899999975544322 3689999999998
Q ss_pred EEEeccCC-CCcceEEEccCCCEEEEEeCCC---------CeEEEEEeccccCccceeecccCCCCCceEeCCCCC-EEE
Q 016318 227 TTVLLRNL-QFPNGLSLSKDKSFFVFCEGSV---------GRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWV 295 (391)
Q Consensus 227 ~~~~~~~~-~~~ngia~~~d~~~l~v~et~~---------~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~-lwv 295 (391)
...+.... .....++++|||++|.++.... ..|+.+++++. +...+.........++++++|+ ++.
T Consensus 412 ~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g---~~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 412 PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR---KIFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT---EEEECSCSSSBEEEEEECTTSCEEEE
T ss_pred eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC---cEEEeeCCCcccCCceEcCCCCEEEE
Confidence 87776333 3447899999999876664322 47888887652 2222222112234578899998 444
Q ss_pred EE
Q 016318 296 AI 297 (391)
Q Consensus 296 a~ 297 (391)
+.
T Consensus 489 ~s 490 (1045)
T 1k32_A 489 LS 490 (1045)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 246
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.00 E-value=0.00046 Score=64.28 Aligned_cols=135 Identities=17% Similarity=0.252 Sum_probs=83.6
Q ss_pred CCcEEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC----C----CEEEEeCCCcccchhheeeecccC
Q 016318 142 TGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE----G----NVYFTDSSTNYQRRNFMQLVFSAE 212 (391)
Q Consensus 142 ~g~L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~----G----~ly~td~~~~~~~~~~~~~~~~~~ 212 (391)
...++++... .||+.+|.++..+..+.. ..+|++++-++ | -+|+++.. .
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~R~---------------~ 96 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT-------GKLNNVDIRYDFPLNGKKVDIAAASNRS---------------E 96 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC-------SCEEEEEEEEEEEETTEEEEEEEEEECS---------------T
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC-------CCcccEEEecccccCCceEeEEEEeCCC---------------C
Confidence 3456666554 569999997766655421 24677666542 1 23444421 0
Q ss_pred CCceE--EEEeCCCCeEEEec-------cCCCCcceEEE--ccC-CC-EEEEEeCCCCeEEEEEeccccCc--cceeec-
Q 016318 213 DTGRV--LKYDPTTKQTTVLL-------RNLQFPNGLSL--SKD-KS-FFVFCEGSVGRLHKYWLIGEKAG--NLEAFA- 276 (391)
Q Consensus 213 ~~g~l--~~~d~~~~~~~~~~-------~~~~~~ngia~--~~d-~~-~l~v~et~~~~I~~~~~~g~~~g--~~~~~~- 276 (391)
++++| +..|+++++++.+. ..+..|.|+|+ +++ ++ ++|+++. .+++..|.+.....+ +.+...
T Consensus 97 ~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 97 GKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp TCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEE
Confidence 03444 55588888877763 33478999999 774 43 5777754 478888877533223 223333
Q ss_pred -ccCCCCCceEeCC-CCCEEEEEcC
Q 016318 277 -ILPGYPDNVRTNE-KGEFWVAIHC 299 (391)
Q Consensus 277 -~~~g~p~~i~~d~-~G~lwva~~~ 299 (391)
.+++.|.++..|+ .|.+|++...
T Consensus 176 f~lgsq~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 176 FKMNSQTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETT
T ss_pred ecCCCCcceEEEcCCCCeEEEeccc
Confidence 3567888999985 6779999765
No 247
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.99 E-value=0.00068 Score=69.50 Aligned_cols=202 Identities=7% Similarity=-0.036 Sum_probs=107.2
Q ss_pred CcceEEEccCCCeeEEEecC---------CEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEE
Q 016318 70 GPESMAFDPLGRGPYTGVAD---------GRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~---------g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~ 138 (391)
+..+++++|||+.+.++..+ +.|+.++.. ....+... ......+..+++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~--------------------~~~~~~~~~~~~ 121 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPP--------------------EVSNAKLQYAGW 121 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCT--------------------TCCSCCCSBCCB
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCC--------------------ccccccccccEE
Confidence 47889999999977776653 677777765 22111100 001123456778
Q ss_pred ecCCCcEEEEECCCCeEEEeCCCCeeEEceeccCCCc--------------ccCCcceeecCCCC-EEEEeCC-Cc---c
Q 016318 139 DKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVP--------------LRFTNDLDIDDEGN-VYFTDSS-TN---Y 199 (391)
Q Consensus 139 d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~--------------~~~~~~l~~d~~G~-ly~td~~-~~---~ 199 (391)
++++..|..+. ...|+.+|.++++...+........ +....+++.++||+ |+++... .. +
T Consensus 122 SPdG~~la~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~ 200 (723)
T 1xfd_A 122 GPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIM 200 (723)
T ss_dssp CSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEE
T ss_pred CCCCCEEEEEE-CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceE
Confidence 88433454443 3569999998887665543211100 11236789999996 4444311 00 0
Q ss_pred cchh-------heeee-c----ccCCCceEEEEeCCCCeE-EEeccC------CCCcceEEEccCCCEEEEEe-CC--CC
Q 016318 200 QRRN-------FMQLV-F----SAEDTGRVLKYDPTTKQT-TVLLRN------LQFPNGLSLSKDKSFFVFCE-GS--VG 257 (391)
Q Consensus 200 ~~~~-------~~~~~-~----~~~~~g~l~~~d~~~~~~-~~~~~~------~~~~ngia~~~d~~~l~v~e-t~--~~ 257 (391)
.... ....+ + +......|+.+|.++++. ..+... ......++++|||+.+++.. .. ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 280 (723)
T 1xfd_A 201 ELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVS 280 (723)
T ss_dssp EECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEE
T ss_pred EeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeE
Confidence 0000 00000 0 011234789999988874 444322 12345689999999664442 21 24
Q ss_pred eEEEEEeccccCcccee-ecc-cCCC----CCceEeCCCCC-EEE
Q 016318 258 RLHKYWLIGEKAGNLEA-FAI-LPGY----PDNVRTNEKGE-FWV 295 (391)
Q Consensus 258 ~I~~~~~~g~~~g~~~~-~~~-~~g~----p~~i~~d~~G~-lwv 295 (391)
.|+.+++++. +... +.. ..+. +..++++++|+ +++
T Consensus 281 ~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 322 (723)
T 1xfd_A 281 ILTLCDATTG---VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFF 322 (723)
T ss_dssp EEEEEETTTC---CEEEEEEEECSSCCCCCCCCCEECTTSCSEEE
T ss_pred EEEEEeCCCC---cceEEEEeccCCEEeccCCCceEcCCCCeEEE
Confidence 5777776542 2222 211 1222 24788999998 444
No 248
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.98 E-value=0.00038 Score=66.30 Aligned_cols=179 Identities=12% Similarity=0.072 Sum_probs=101.0
Q ss_pred EccCCCeeEEEecCCEEEEEeCC----ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec-CCCcEEEEEC
Q 016318 76 FDPLGRGPYTGVADGRILFWDGL----KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK-KTGDLYIADA 150 (391)
Q Consensus 76 ~d~~G~~ly~~~~~g~I~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~-~~g~L~V~d~ 150 (391)
.|.+|. +|+++..| +++++.+ .|..+.... .......|++|+ +.++||++..
T Consensus 19 ~d~~g~-l~vgt~~G-l~~~~~~~~g~~W~~~~~~~---------------------~~~~v~~i~~dp~~~~~l~~g~~ 75 (394)
T 3b7f_A 19 ESGPVM-LLVATIKG-AWFLASDPARRTWELRGPVF---------------------LGHTIHHIVQDPREPERMLMAAR 75 (394)
T ss_dssp CCSCCE-EEEEETTE-EEEEEECTTSCSEEEEEEES---------------------TTSEEEEEEECSSSTTCEEEEEE
T ss_pred CCCCCE-EEEEecCc-eEEEECCCCCCCceECCccC---------------------CCCceEEEEECCCCCCeEEEEec
Confidence 455666 99999876 7766532 455432110 123467888986 3578999976
Q ss_pred CC----CeEEEeCCCCeeEEceec--cCCC-------cccCCcceeecC---CCCEEEEeCCCcccchhheeeecccCCC
Q 016318 151 YF----GLMKVGPEGGLATSLATE--AEGV-------PLRFTNDLDIDD---EGNVYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 151 ~~----gl~~~d~~~g~~~~~~~~--~~~~-------~~~~~~~l~~d~---~G~ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
.. +|++.+..+...+.+... .... .......|++++ .+.+|+....
T Consensus 76 ~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~------------------ 137 (394)
T 3b7f_A 76 TGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP------------------ 137 (394)
T ss_dssp C--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEET------------------
T ss_pred CCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecC------------------
Confidence 55 688887665555555322 1111 111234577875 6789997632
Q ss_pred ceEEEEeCCCCeEEEeccC-----------------C--CCcceEEEcc-CCCEEEEEeCCCCeEEEEEeccccCcccee
Q 016318 215 GRVLKYDPTTKQTTVLLRN-----------------L--QFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEA 274 (391)
Q Consensus 215 g~l~~~d~~~~~~~~~~~~-----------------~--~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g~~~g~~~~ 274 (391)
++|++.+..+...+.+... . .....|+++| +.+.+|++.. .+.|++.+-.|. +.+.
T Consensus 138 ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~---tW~~ 213 (394)
T 3b7f_A 138 QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAGT---DWKP 213 (394)
T ss_dssp TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTTS---SCEE
T ss_pred CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCCC---CceE
Confidence 6899987666565554321 0 0123678887 3445888743 356877753332 2222
Q ss_pred ecc------cC------C-CCCceEeCCC--CCEEEEEcC
Q 016318 275 FAI------LP------G-YPDNVRTNEK--GEFWVAIHC 299 (391)
Q Consensus 275 ~~~------~~------g-~p~~i~~d~~--G~lwva~~~ 299 (391)
+.. +| + ....|.++++ +.+|++...
T Consensus 214 ~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 214 LNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp CCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT
T ss_pred CCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC
Confidence 211 11 0 1235677775 779998654
No 249
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.96 E-value=0.0016 Score=62.28 Aligned_cols=161 Identities=11% Similarity=0.121 Sum_probs=94.5
Q ss_pred cCcceEEEcc-CCCeeEEEecCCEEEEEeCCc---eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCc
Q 016318 69 QGPESMAFDP-LGRGPYTGVADGRILFWDGLK---WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (391)
Q Consensus 69 ~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~ 144 (391)
..-.++++.+ +|+.+.+++.||.|..|+... -..+ .|. ... ...+...++++++ +++
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~---------~~~--------~~~-~h~~~v~~~~~~~-~~~ 124 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY---------SSS--------LTY-DCSSTVTQITMIP-NFD 124 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC---------SCS--------EEE-ECSSCEEEEEECT-TSS
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc---------cee--------eec-cCCCCEEEEEEeC-CCC
Confidence 4567899999 999899999999999997541 0000 000 000 1235577899998 555
Q ss_pred -EEEEECCCCeEEEeCC---CCeeEEcee-c----cCCC---cccCCccee--ecCCCCEEEEeCCCcccchhheeeecc
Q 016318 145 -LYIADAYFGLMKVGPE---GGLATSLAT-E----AEGV---PLRFTNDLD--IDDEGNVYFTDSSTNYQRRNFMQLVFS 210 (391)
Q Consensus 145 -L~V~d~~~gl~~~d~~---~g~~~~~~~-~----~~~~---~~~~~~~l~--~d~~G~ly~td~~~~~~~~~~~~~~~~ 210 (391)
|+++.....|..+|.+ +++...... . ..-. .......+. ..+++++.++.+.
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------------- 190 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN-------------- 190 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET--------------
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC--------------
Confidence 4555444446666652 332222111 0 0000 011223333 3456666555433
Q ss_pred cCCCceEEEEeCCCCeEEEeccC---CCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 211 AEDTGRVLKYDPTTKQTTVLLRN---LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 211 ~~~~g~l~~~d~~~~~~~~~~~~---~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
+|.|..||..+++....... ....+.++++|+++.++.+ +..+.|..+++..
T Consensus 191 ---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~ 245 (437)
T 3gre_A 191 ---LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILG-TTRGIIDIWDIRF 245 (437)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEE-ETTSCEEEEETTT
T ss_pred ---CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEE-cCCCeEEEEEcCC
Confidence 57899999988776444332 3467899999999966655 5567788888653
No 250
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.95 E-value=0.0005 Score=63.09 Aligned_cols=189 Identities=11% Similarity=-0.018 Sum_probs=111.3
Q ss_pred cCcceEEEccCCC-eeEEEecCCEEEEEeC-CceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 69 QGPESMAFDPLGR-GPYTGVADGRILFWDG-LKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 69 ~gPe~i~~d~~G~-~ly~~~~~g~I~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
....++++.++|+ .++++..+|.|..|+. ...... .... ........++++++ ++.|+
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~------------------~~~~~~v~~l~~~~-~~~l~ 116 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ-ALTN------------------NEANLGICRICKYG-DDKLI 116 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEE-ECBS------------------CCCCSCEEEEEEET-TTEEE
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceE-eccc------------------cCCCCceEEEEeCC-CCEEE
Confidence 3566889999999 9999999999999987 521111 0000 00134567889988 56666
Q ss_pred EEECCCCeEEEeCCC---------CeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceE
Q 016318 147 IADAYFGLMKVGPEG---------GLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRV 217 (391)
Q Consensus 147 V~d~~~gl~~~d~~~---------g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l 217 (391)
.+.....|..+|..+ ++. +. ... ....+..+++.+++ ++++.. ++.|
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~-~~~--~~~~v~~~~~~~~~-l~~~~~------------------d~~i 172 (342)
T 1yfq_A 117 AASWDGLIEVIDPRNYGDGVIAVKNLN--SN-NTK--VKNKIFTMDTNSSR-LIVGMN------------------NSQV 172 (342)
T ss_dssp EEETTSEEEEECHHHHTTBCEEEEESC--SS-SSS--SCCCEEEEEECSSE-EEEEES------------------TTEE
T ss_pred EEcCCCeEEEEcccccccccccccCCe--ee-EEe--eCCceEEEEecCCc-EEEEeC------------------CCeE
Confidence 666555588887654 221 11 111 11346678888777 555543 4788
Q ss_pred EEEeCCC-Ce--EEEec-cCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEeccc--c--CccceeecccC---------
Q 016318 218 LKYDPTT-KQ--TTVLL-RNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGE--K--AGNLEAFAILP--------- 279 (391)
Q Consensus 218 ~~~d~~~-~~--~~~~~-~~~~~~ngia~~~-d~~~l~v~et~~~~I~~~~~~g~--~--~g~~~~~~~~~--------- 279 (391)
..||..+ ++ ..... ..-.....++++| +++.++++ ...+.|..++++.. . ......+....
T Consensus 173 ~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (342)
T 1yfq_A 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS-SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA 251 (342)
T ss_dssp EEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE-ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSC
T ss_pred EEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE-ecCCcEEEEEEcCCCcccccccceeeecccccccccccc
Confidence 9999876 43 22222 2234567899999 99966665 45677777666532 1 01112222111
Q ss_pred CCCCceEeCCCCCEEEEEcCCCc
Q 016318 280 GYPDNVRTNEKGEFWVAIHCRRS 302 (391)
Q Consensus 280 g~p~~i~~d~~G~lwva~~~~~~ 302 (391)
+....++++++|++.++......
T Consensus 252 ~~i~~~~~s~~~~~l~~~~~dg~ 274 (342)
T 1yfq_A 252 YPVNSIEFSPRHKFLYTAGSDGI 274 (342)
T ss_dssp CCEEEEEECTTTCCEEEEETTSC
T ss_pred eeEEEEEEcCCCCEEEEecCCce
Confidence 13456788898885555444333
No 251
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.95 E-value=0.0051 Score=58.64 Aligned_cols=179 Identities=9% Similarity=-0.004 Sum_probs=100.9
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY 151 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~ 151 (391)
.+|++.++|+.+.+++.||.|..|+....+.+..... ...+...+.++ +..|..+...
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~--------------------h~~~v~~~s~~--~~~l~sgs~d 208 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS--------------------HSARVGSLSWN--SYILSSGSRS 208 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--------------------CSSCEEEEEEE--TTEEEEEETT
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC--------------------CCCceEEEeeC--CCEEEEEeCC
Confidence 5899999999999999999999998873333322211 12334455554 2344444444
Q ss_pred CCeEEEeCCCCee--EEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE--
Q 016318 152 FGLMKVGPEGGLA--TSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT-- 227 (391)
Q Consensus 152 ~gl~~~d~~~g~~--~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-- 227 (391)
..+..+|...... ..+... ......+...++|+..++... ++.+..++..+++.
T Consensus 209 ~~i~~~d~~~~~~~~~~~~~h-----~~~~~~~~~~~~g~~l~s~~~-----------------D~~v~i~~~~~~~~~~ 266 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATLSGH-----SQEVCGLRWAPDGRHLASGGN-----------------DNLVNVWPSAPGEGGW 266 (420)
T ss_dssp SEEEEEETTSSSCEEEEEECC-----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESSCCSSCS
T ss_pred CceeEeeecccceeeEEeccc-----ccceeeeeecCCCCeeeeeec-----------------cccceEEeeccccccc
Confidence 4477777654322 222111 124566778888887766533 46777788766542
Q ss_pred ---EEeccCCCCcceEEEccCCCEEEEEe--CCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEE
Q 016318 228 ---TVLLRNLQFPNGLSLSKDKSFFVFCE--GSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAI 297 (391)
Q Consensus 228 ---~~~~~~~~~~ngia~~~d~~~l~v~e--t~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~ 297 (391)
............++++|++..++++. +..+.|..+++.. ++.............+...++++..++.
T Consensus 267 ~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t---~~~~~~~~~~~~v~~~~~~~~~~~lv~~ 338 (420)
T 4gga_A 267 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS---GACLSAVDAHSQVCSILWSPHYKELISG 338 (420)
T ss_dssp CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT---TEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc---cccceeeccccceeeeeecCCCCeEEEE
Confidence 22222223456788888766555442 3346677776543 2211111122234556677777755544
No 252
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.95 E-value=0.00062 Score=72.24 Aligned_cols=191 Identities=14% Similarity=0.036 Sum_probs=119.4
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
....+++++++|+.+.+++.||.|..|+.......... . .......++|++ +..|..+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~--------------------~-~~~~V~~l~fsp-g~~L~S~ 75 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL--------------------E-DRSAIKEMRFVK-GIYLVVI 75 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC--------------------S-SCCCEEEEEEET-TTEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc--------------------C-CCCCEEEEEEcC-CCEEEEE
Confidence 35679999999999999999999999977632222111 0 123467899998 4446666
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT 228 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 228 (391)
+..+.|..+|.++++...... .. .....++++++|+..++.+. +|.|..||.++++..
T Consensus 76 s~D~~v~lWd~~~~~~~~~~~-~~----~~V~~v~~sp~g~~l~sgs~-----------------dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 76 NAKDTVYVLSLYSQKVLTTVF-VP----GKITSIDTDASLDWMLIGLQ-----------------NGSMIVYDIDRDQLS 133 (902)
T ss_dssp ETTCEEEEEETTTCSEEEEEE-CS----SCEEEEECCTTCSEEEEEET-----------------TSCEEEEETTTTEEE
T ss_pred ECcCeEEEEECCCCcEEEEEc-CC----CCEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCccc
Confidence 655668889988765332111 11 24678899999976665533 578999999888754
Q ss_pred Eec------------cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeeccc------------------
Q 016318 229 VLL------------RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL------------------ 278 (391)
Q Consensus 229 ~~~------------~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~------------------ 278 (391)
.+. ......+.++++|++..++++-...+.| .+++...+ ....+...
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE--IKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE--EEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc--eEEEEecccCCcCCCccccccccccc
Confidence 221 1123467899999743244444666777 77765421 11112110
Q ss_pred CCCCCceEeCCCCCEEEEEcCCCchhhh
Q 016318 279 PGYPDNVRTNEKGEFWVAIHCRRSLYSH 306 (391)
Q Consensus 279 ~g~p~~i~~d~~G~lwva~~~~~~~~~~ 306 (391)
.+....++++++|++.++......+.+|
T Consensus 211 ~~~V~~v~fspdg~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 211 TPKVIQSLYHPNSLHIITIHEDNSLVFW 238 (902)
T ss_dssp CCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence 0223567889999877776665555444
No 253
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.94 E-value=0.0032 Score=65.03 Aligned_cols=174 Identities=6% Similarity=-0.036 Sum_probs=91.1
Q ss_pred ceEEEccCCCeeEEEecC---------CEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 72 ESMAFDPLGRGPYTGVAD---------GRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~---------g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
.+++++|||+.+.+++.+ +.++.++...-... ......+.....+++|++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~---------------------~l~~~~~~~~~~~~SPdG 123 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI---------------------TEERIPNNTQWVTWSPVG 123 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC---------------------CSSCCCTTEEEEEECSST
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE---------------------EcccCCCcceeeEECCCC
Confidence 347889999977777665 44556655411100 000112334567888844
Q ss_pred CcEEEEECCCCeEEEeCCCCeeEEceeccC------CCc--------ccCCcceeecCCCC-EEEEe--CCCc--ccch-
Q 016318 143 GDLYIADAYFGLMKVGPEGGLATSLATEAE------GVP--------LRFTNDLDIDDEGN-VYFTD--SSTN--YQRR- 202 (391)
Q Consensus 143 g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~------~~~--------~~~~~~l~~d~~G~-ly~td--~~~~--~~~~- 202 (391)
..|..+ ..+.|+.++..+++.+.+..... |.+ +.....++..|||+ |.++. .+.. +...
T Consensus 124 ~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~ 202 (740)
T 4a5s_A 124 HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSF 202 (740)
T ss_dssp TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEE
T ss_pred CEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEe
Confidence 445433 34569999988887666543111 000 12234578899996 54442 1100 0000
Q ss_pred ------------hhee-eecccCCCceEEEEeCCC---C---eEEEecc------CCCCcceEEEccCCCEEEEE-eCCC
Q 016318 203 ------------NFMQ-LVFSAEDTGRVLKYDPTT---K---QTTVLLR------NLQFPNGLSLSKDKSFFVFC-EGSV 256 (391)
Q Consensus 203 ------------~~~~-~~~~~~~~g~l~~~d~~~---~---~~~~~~~------~~~~~ngia~~~d~~~l~v~-et~~ 256 (391)
...+ ..-+..+...|+.+|.++ + +...+.. .......++++|||+.+++. ....
T Consensus 203 ~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~ 282 (740)
T 4a5s_A 203 YSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ 282 (740)
T ss_dssp CCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST
T ss_pred ecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC
Confidence 0000 000112234688999988 7 5555532 22345578999999844333 2222
Q ss_pred --CeEEEEEeccc
Q 016318 257 --GRLHKYWLIGE 267 (391)
Q Consensus 257 --~~I~~~~~~g~ 267 (391)
..|+.+++++.
T Consensus 283 ~~~~i~~~d~~tg 295 (740)
T 4a5s_A 283 NYSVMDICDYDES 295 (740)
T ss_dssp TEEEEEEEEEETT
T ss_pred CEEEEEEEECCCC
Confidence 26888887653
No 254
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.91 E-value=0.00064 Score=69.78 Aligned_cols=198 Identities=9% Similarity=-0.045 Sum_probs=102.5
Q ss_pred CcceEEEccCCCeeEEEec---------CCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec
Q 016318 70 GPESMAFDPLGRGPYTGVA---------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~---------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~ 140 (391)
+..+++++|||+.+.+++. ++.|+.++.+.-+.... .........+++++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~---------------------~~l~~~~~~~~~SP 119 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG---------------------NELPRPIQYLCWSP 119 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS---------------------SCCCSSBCCEEECS
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc---------------------eecCcccccceECC
Confidence 3678999999997776665 57788887652111000 00012345688999
Q ss_pred CCCcEEEEECCCCeEEEeCCCCeeEEceeccCCCc--------------ccCCcceeecCCCC-EEEEeCC-Cccc---c
Q 016318 141 KTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVP--------------LRFTNDLDIDDEGN-VYFTDSS-TNYQ---R 201 (391)
Q Consensus 141 ~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~--------------~~~~~~l~~d~~G~-ly~td~~-~~~~---~ 201 (391)
++..|..+ ....|+.++..+++...+........ +.....++..+||+ |.++... .... .
T Consensus 120 DG~~la~~-~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~ 198 (719)
T 1z68_A 120 VGSKLAYV-YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAY 198 (719)
T ss_dssp STTCEEEE-ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred CCCEEEEE-ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEe
Confidence 43345444 34569999998887665532111000 11235789999996 4443211 0000 0
Q ss_pred -----------hhheee-ecccCCCceEEEEeCCCCeEE---Eec------cCCCCcceEEEccCCCEEEEE-eCCC--C
Q 016318 202 -----------RNFMQL-VFSAEDTGRVLKYDPTTKQTT---VLL------RNLQFPNGLSLSKDKSFFVFC-EGSV--G 257 (391)
Q Consensus 202 -----------~~~~~~-~~~~~~~g~l~~~d~~~~~~~---~~~------~~~~~~ngia~~~d~~~l~v~-et~~--~ 257 (391)
....+. .-+..+...|+.+|.++++.. .+. ........++++||++.++.. +... .
T Consensus 199 ~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~ 278 (719)
T 1z68_A 199 SYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVS 278 (719)
T ss_dssp EECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEE
T ss_pred eccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeE
Confidence 000000 001122347888898877642 221 112234678999998744432 2122 3
Q ss_pred eEEEEE----eccccCccceeec-----ccCCCCC-----ceEeCCCCC
Q 016318 258 RLHKYW----LIGEKAGNLEAFA-----ILPGYPD-----NVRTNEKGE 292 (391)
Q Consensus 258 ~I~~~~----~~g~~~g~~~~~~-----~~~g~p~-----~i~~d~~G~ 292 (391)
+|+.++ +.+. +..... ...+..+ .++++++|+
T Consensus 279 ~l~~~d~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 324 (719)
T 1z68_A 279 VLSICDFREDWQTW---DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAI 324 (719)
T ss_dssp EEEEEEECSSSSSE---ECCGGGEEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred EEEEEcccCCCCCC---ceEEEEecccccCCceEccccCCccEECCCCC
Confidence 588887 4432 222111 1223333 678889998
No 255
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.90 E-value=0.001 Score=63.93 Aligned_cols=152 Identities=13% Similarity=0.059 Sum_probs=93.7
Q ss_pred CccceEEEecCCCcE-EEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhheeee
Q 016318 131 GRPLGLRFDKKTGDL-YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQLV 208 (391)
Q Consensus 131 g~P~gi~~d~~~g~L-~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~~~ 208 (391)
.+..+|+|+|.++++ .+|.....|..+|..++....+... .+ ....+++|++.+ ++++.++.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-~g-H~~~V~~l~f~p~~~~~l~s~s~------------ 185 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-IG-AGGSITGLKFNPLNTNQFYASSM------------ 185 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-CS-SSCCCCEEEECSSCTTEEEEECS------------
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-cC-CCCCEEEEEEeCCCCCEEEEEeC------------
Confidence 457789999755554 4555445588888877654333221 11 123578899997 6787777643
Q ss_pred cccCCCceEEEEeCCCCeEEEeccCC---CCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCce
Q 016318 209 FSAEDTGRVLKYDPTTKQTTVLLRNL---QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNV 285 (391)
Q Consensus 209 ~~~~~~g~l~~~d~~~~~~~~~~~~~---~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i 285 (391)
+|.|..||.+++....+...- .....++++++++.++.+ ...+.|..+++.+... ..+....+....+
T Consensus 186 -----D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~dg~i~~wd~~~~~~---~~~~~h~~~v~~v 256 (435)
T 4e54_B 186 -----EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTG-DNVGNVILLNMDGKEL---WNLRMHKKKVTHV 256 (435)
T ss_dssp -----SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEE-CSSSBEEEEESSSCBC---CCSBCCSSCEEEE
T ss_pred -----CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEE-eCCCcEeeeccCccee---EEEecccceEEee
Confidence 578889999887776654322 234578999999965554 6677898888765321 1121112234567
Q ss_pred EeCCCCC-EEEEEcCCCchhh
Q 016318 286 RTNEKGE-FWVAIHCRRSLYS 305 (391)
Q Consensus 286 ~~d~~G~-lwva~~~~~~~~~ 305 (391)
++++++. +.++......+.+
T Consensus 257 ~~~p~~~~~~~s~s~d~~v~i 277 (435)
T 4e54_B 257 ALNPCCDWFLATASVDQTVKI 277 (435)
T ss_dssp EECTTCSSEEEEEETTSBCCE
T ss_pred eecCCCceEEEEecCcceeeE
Confidence 8888876 4444333344333
No 256
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.90 E-value=0.001 Score=61.38 Aligned_cols=206 Identities=10% Similarity=0.012 Sum_probs=109.2
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEE--ecCCCc-E
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF--DKKTGD-L 145 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~--d~~~g~-L 145 (391)
....++++.++|+.++++..+|.|..|+........... ......++++ ++ +++ |
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---------------------~~~~v~~~~~~~~~-~~~~l 144 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ---------------------HDAPVKTIHWIKAP-NYSCV 144 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---------------------CSSCEEEEEEEECS-SCEEE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc---------------------ccCceEEEEEEeCC-CCCEE
Confidence 345688999999989999999999999877222211110 1244567888 66 555 4
Q ss_pred EEEECCCCeEEEeCCCCeeEEceeccCCC---cccCCcceeecCCCCEEEEeCCCcccc--------------------h
Q 016318 146 YIADAYFGLMKVGPEGGLATSLATEAEGV---PLRFTNDLDIDDEGNVYFTDSSTNYQR--------------------R 202 (391)
Q Consensus 146 ~V~d~~~gl~~~d~~~g~~~~~~~~~~~~---~~~~~~~l~~d~~G~ly~td~~~~~~~--------------------~ 202 (391)
+.+.....|..+|..+++........... ......-+....++.+.+-+....-.. .
T Consensus 145 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (368)
T 3mmy_A 145 MTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDK 224 (368)
T ss_dssp EEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECT
T ss_pred EEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccC
Confidence 44444444888888766432211111000 001111122233444433332111000 0
Q ss_pred h-heeeecccCCCceEEEEeCCCCe----EEEeccCCC------------CcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 016318 203 N-FMQLVFSAEDTGRVLKYDPTTKQ----TTVLLRNLQ------------FPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 265 (391)
Q Consensus 203 ~-~~~~~~~~~~~g~l~~~d~~~~~----~~~~~~~~~------------~~ngia~~~d~~~l~v~et~~~~I~~~~~~ 265 (391)
. ....++.+..+|.+..||..... ...+..... ..+.++++||+++++.+ ...+.|..+++.
T Consensus 225 ~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-~~dg~i~iwd~~ 303 (368)
T 3mmy_A 225 QNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV-GSDGRFSFWDKD 303 (368)
T ss_dssp TSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE-ETTSCEEEEETT
T ss_pred CCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEE-ccCCeEEEEECC
Confidence 0 00014445556777788876542 112211111 46789999999977665 456788888865
Q ss_pred cccCccceeecccCCCCCceEeCCCCCEEEEEcC
Q 016318 266 GEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 266 g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
.. .....+....+....++++++|.+.++...
T Consensus 304 ~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 304 AR--TKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp TT--EEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred CC--cEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 32 111222222334567899999986665443
No 257
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.89 E-value=0.0017 Score=60.89 Aligned_cols=155 Identities=12% Similarity=0.058 Sum_probs=94.3
Q ss_pred cCcceEEEcc-CCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC--CC-c
Q 016318 69 QGPESMAFDP-LGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK--TG-D 144 (391)
Q Consensus 69 ~gPe~i~~d~-~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~--~g-~ 144 (391)
....++++.+ +++.++++..+|.|..|+........... .......+.+.+. ++ .
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~ 158 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN---------------------FEETVYSHHMSPVSTKHCL 158 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE---------------------CSSCEEEEEECSSCSSCCE
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc---------------------CCCceeeeEeecCCCCCcE
Confidence 3567888988 67778889999999999877322221110 0122345555542 22 3
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT 223 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 223 (391)
++++.....|..+|..+++........ ......+++.+++. ++++.+. +|.+..||..
T Consensus 159 ~~~~~~~~~v~~~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~ll~~~~~-----------------dg~i~i~d~~ 217 (408)
T 4a11_B 159 VAVGTRGPKVQLCDLKSGSCSHILQGH----RQEILAVSWSPRYDYILATASA-----------------DSRVKLWDVR 217 (408)
T ss_dssp EEEEESSSSEEEEESSSSCCCEEECCC----CSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETT
T ss_pred EEEEcCCCeEEEEeCCCcceeeeecCC----CCcEEEEEECCCCCcEEEEEcC-----------------CCcEEEEECC
Confidence 555555556888998776433222111 12467889999886 5655432 4778888876
Q ss_pred CCe--EEEe---------------ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 224 TKQ--TTVL---------------LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 224 ~~~--~~~~---------------~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
+++ ...+ .......+.++++|++++++.+ ...+.|..+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~ 276 (408)
T 4a11_B 218 RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV-GTDNRMRLWNSSN 276 (408)
T ss_dssp CSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTT
T ss_pred CCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe-cCCCeEEEEECCC
Confidence 543 1221 0112245689999999977666 4566788888764
No 258
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.88 E-value=0.0021 Score=58.39 Aligned_cols=160 Identities=9% Similarity=0.007 Sum_probs=93.6
Q ss_pred cCcceEEEcc--CCCeeEEEecCCEEEEEeCCce---------eEEEeecCCCcccCCCCCCccccccccCccCccceEE
Q 016318 69 QGPESMAFDP--LGRGPYTGVADGRILFWDGLKW---------TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (391)
Q Consensus 69 ~gPe~i~~d~--~G~~ly~~~~~g~I~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~ 137 (391)
....++++.+ +++.++++..||.|..|+...- ..... .....+...+++
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~--------------------~~~~~~~v~~~~ 117 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCT--------------------LNDSKGSLYSVK 117 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEE--------------------ECCCSSCEEEEE
T ss_pred CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeee--------------------ecccCCceeEEE
Confidence 3456788887 5888999999999998876510 11111 111235567899
Q ss_pred EecCC-Cc-EEEEECCCCeEEEeCCCCeeEE-ce-----e---ccCCCcccCCcceeecCC---CCEEEEeCCCcccchh
Q 016318 138 FDKKT-GD-LYIADAYFGLMKVGPEGGLATS-LA-----T---EAEGVPLRFTNDLDIDDE---GNVYFTDSSTNYQRRN 203 (391)
Q Consensus 138 ~d~~~-g~-L~V~d~~~gl~~~d~~~g~~~~-~~-----~---~~~~~~~~~~~~l~~d~~---G~ly~td~~~~~~~~~ 203 (391)
++++. ++ |+++.....|..+|..+++... +. . ............++..++ +.++++.+.
T Consensus 118 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~------- 190 (351)
T 3f3f_A 118 FAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL------- 190 (351)
T ss_dssp ECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-------
T ss_pred EcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC-------
Confidence 99831 55 5555544458888876654211 10 0 001112335567777775 666555533
Q ss_pred heeeecccCCCceEEEEeCCCCeEEEe---ccCCCCcceEEEccCC----CEEEEEeCCCCeEEEEEecc
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTKQTTVL---LRNLQFPNGLSLSKDK----SFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~~~~~~---~~~~~~~ngia~~~d~----~~l~v~et~~~~I~~~~~~g 266 (391)
++.+..++..+++.... ...-...+.++++|++ +.++ +-...+.|..+++..
T Consensus 191 ----------~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~-s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 191 ----------EQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIA-TGCKDGRIRIFKITE 249 (351)
T ss_dssp ----------TEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEE-EEETTSCEEEEEEEE
T ss_pred ----------CCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEE-EEcCCCeEEEEeCCC
Confidence 45666666666654332 2223356789999998 5444 445567777777654
No 259
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.87 E-value=0.0033 Score=58.51 Aligned_cols=137 Identities=8% Similarity=0.111 Sum_probs=76.5
Q ss_pred EEEEECC--CC---eEEEeCCCCeeEEceec--cCCCcccCCcceee--cC-CCC--EEEEeCCCcccchhheeeecccC
Q 016318 145 LYIADAY--FG---LMKVGPEGGLATSLATE--AEGVPLRFTNDLDI--DD-EGN--VYFTDSSTNYQRRNFMQLVFSAE 212 (391)
Q Consensus 145 L~V~d~~--~g---l~~~d~~~g~~~~~~~~--~~~~~~~~~~~l~~--d~-~G~--ly~td~~~~~~~~~~~~~~~~~~ 212 (391)
+++++.. .. ++.+|++++.++.+... .-+..+..|++++. ++ .|. +|+++.
T Consensus 89 a~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k----------------- 151 (355)
T 3amr_A 89 AAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK----------------- 151 (355)
T ss_dssp EEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-----------------
T ss_pred EEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-----------------
Confidence 4666655 33 56668888877766432 00122468999998 76 455 444442
Q ss_pred CCceEEEEeC---CCCeE--EEe--ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc--cC---C
Q 016318 213 DTGRVLKYDP---TTKQT--TVL--LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--LP---G 280 (391)
Q Consensus 213 ~~g~l~~~d~---~~~~~--~~~--~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~--~~---g 280 (391)
+|++..|.. ..++. +.+ ......+-|+++++....||++|.. ..||+|+.+.....+.+.+.. .. .
T Consensus 152 -~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~a 229 (355)
T 3amr_A 152 -EGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTR 229 (355)
T ss_dssp -SSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCS
T ss_pred -CCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCcccc
Confidence 355555443 22211 111 1223467899999988889999876 569999965322112222221 12 2
Q ss_pred CCCceEe--CCCCC--EEEEEcCC
Q 016318 281 YPDNVRT--NEKGE--FWVAIHCR 300 (391)
Q Consensus 281 ~p~~i~~--d~~G~--lwva~~~~ 300 (391)
-+.+|++ .++|. ++++..+.
T Consensus 230 DvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 230 DIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp CEEEEEEEECGGGCEEEEEEEGGG
T ss_pred CcceEEEEecCCCCEEEEEEcCCC
Confidence 3567777 44444 45544443
No 260
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.86 E-value=0.0012 Score=62.92 Aligned_cols=196 Identities=14% Similarity=0.098 Sum_probs=110.8
Q ss_pred CcceEEEcc--CCCeeEEEecCC----EEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC
Q 016318 70 GPESMAFDP--LGRGPYTGVADG----RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (391)
Q Consensus 70 gPe~i~~d~--~G~~ly~~~~~g----~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~ 141 (391)
...+|++|+ .+. +|+++..| .|++.+.. .|+.+..... .... . .........+..++++++.
T Consensus 56 ~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~-----~~~~-~---~~~~~~~~~~i~~l~~~~~ 125 (394)
T 3b7f_A 56 TIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEATRPPA-----FNKA-P---EGETGRVVDHVFWLTPGHA 125 (394)
T ss_dssp EEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEECSBCCC-----CCCC-C-------CCCCCEEEEEEECCT
T ss_pred ceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceECCcccc-----CCCc-c---cccccccccceeEEEeCCC
Confidence 457899998 555 99998887 89988544 5665431100 0000 0 0000001124457888752
Q ss_pred --CCcEEEEECCCCeEEEeCCCCeeEEceecc--C------------CCcccCCcceeecC--CCCEEEEeCCCcccchh
Q 016318 142 --TGDLYIADAYFGLMKVGPEGGLATSLATEA--E------------GVPLRFTNDLDIDD--EGNVYFTDSSTNYQRRN 203 (391)
Q Consensus 142 --~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~--~------------~~~~~~~~~l~~d~--~G~ly~td~~~~~~~~~ 203 (391)
.+.||++....+|++.+..+...+.+.... . +........|++++ .++||++...
T Consensus 126 ~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------- 198 (394)
T 3b7f_A 126 SEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------- 198 (394)
T ss_dssp TSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------
T ss_pred CCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------
Confidence 578999987778999977666666553211 0 01112345788886 4689998742
Q ss_pred heeeecccCCCceEEEEeCCCCeEEEeccCC-------------CCcceEEEccC-CCEEEEEeCCCCeEEEEEeccccC
Q 016318 204 FMQLVFSAEDTGRVLKYDPTTKQTTVLLRNL-------------QFPNGLSLSKD-KSFFVFCEGSVGRLHKYWLIGEKA 269 (391)
Q Consensus 204 ~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-------------~~~ngia~~~d-~~~l~v~et~~~~I~~~~~~g~~~ 269 (391)
++|++.+..++..+.+...+ .....|+++++ ...+|++. ...|++.+-.|.
T Consensus 199 -----------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~-- 263 (394)
T 3b7f_A 199 -----------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRREG-- 263 (394)
T ss_dssp -----------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTTT--
T ss_pred -----------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCCC--
Confidence 57888876666666553321 12356788875 35688874 357888763332
Q ss_pred ccceeecc-cCC----CCCceEeC--CCCCEEEEEc
Q 016318 270 GNLEAFAI-LPG----YPDNVRTN--EKGEFWVAIH 298 (391)
Q Consensus 270 g~~~~~~~-~~g----~p~~i~~d--~~G~lwva~~ 298 (391)
+.+.+.. ++. +...|.++ ..+.+|++..
T Consensus 264 -tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 264 -VWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp -EEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred -cceECCCCCCCCCccceEEEEECCCCCCEEEEEec
Confidence 2222221 221 11246676 4577999863
No 261
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.86 E-value=0.0016 Score=66.63 Aligned_cols=152 Identities=9% Similarity=0.031 Sum_probs=84.0
Q ss_pred cceEEEecCCCcEEEEEC--C---CCeEEEeCCCCeeEEceecc-CCCcccCCcceeecCCCC-EEEE-eCCCcccchhh
Q 016318 133 PLGLRFDKKTGDLYIADA--Y---FGLMKVGPEGGLATSLATEA-EGVPLRFTNDLDIDDEGN-VYFT-DSSTNYQRRNF 204 (391)
Q Consensus 133 P~gi~~d~~~g~L~V~d~--~---~gl~~~d~~~g~~~~~~~~~-~~~~~~~~~~l~~d~~G~-ly~t-d~~~~~~~~~~ 204 (391)
...+++++ +|++++... . ..|+.+|..+++...+.... .+........+++.+||+ |++. .....
T Consensus 257 ~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~------ 329 (723)
T 1xfd_A 257 ITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG------ 329 (723)
T ss_dssp EEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS------
T ss_pred eEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccC------
Confidence 45688998 677554322 1 13888899988766554321 111001124788999996 6654 32100
Q ss_pred eeeecccCCCceEEEEe-CCCCe---EEEeccCCCC-cceEEEccCCCEEEEEeCC----CCeEEEEEeccccCccceee
Q 016318 205 MQLVFSAEDTGRVLKYD-PTTKQ---TTVLLRNLQF-PNGLSLSKDKSFFVFCEGS----VGRLHKYWLIGEKAGNLEAF 275 (391)
Q Consensus 205 ~~~~~~~~~~g~l~~~d-~~~~~---~~~~~~~~~~-~ngia~~~d~~~l~v~et~----~~~I~~~~~~g~~~g~~~~~ 275 (391)
......+|+.+| ..+++ .+.+..+-.. ...++++||++.|+++... ..+||+++.++.. ....+
T Consensus 330 -----~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~--~~~~l 402 (723)
T 1xfd_A 330 -----GRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF--NRQCL 402 (723)
T ss_dssp -----SSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC--CCBCS
T ss_pred -----CCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC--Cccee
Confidence 000123688998 45555 5554432222 2236899999999877553 2457777654421 11222
Q ss_pred cc-c--CCCCCceEeCCCCCEEEEEc
Q 016318 276 AI-L--PGYPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 276 ~~-~--~g~p~~i~~d~~G~lwva~~ 298 (391)
.. + .+....++++++|+.++...
T Consensus 403 ~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 403 SCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp STTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred cccccCCCCeEEEEECCCCCEEEEEc
Confidence 21 1 23355788999998666543
No 262
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.84 E-value=0.0012 Score=61.91 Aligned_cols=197 Identities=15% Similarity=0.085 Sum_probs=99.5
Q ss_pred cceEEEccCCCeeEEEec-C--CEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccc-eEEEecCCCcEE
Q 016318 71 PESMAFDPLGRGPYTGVA-D--GRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPL-GLRFDKKTGDLY 146 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~-~--g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~-gi~~d~~~g~L~ 146 (391)
+.++++++||+.+++... + ..|+.++.+.-...... . ...... ++.+++++..|+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~-~--------------------~~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT-E--------------------GKGDNTFGGFISTDERAFF 96 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-C--------------------SSCBCTTTCEECTTSSEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-c--------------------CCCCccccceECCCCCEEE
Confidence 556788999996554433 2 37888876521111111 0 011111 256787444565
Q ss_pred EEECCCCeEEEeCCCCeeEEceeccCCCcccCCc--ceeecCCC---CEEEEeCCCccc-chhheeee--cccCCCceEE
Q 016318 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTN--DLDIDDEG---NVYFTDSSTNYQ-RRNFMQLV--FSAEDTGRVL 218 (391)
Q Consensus 147 V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~--~l~~d~~G---~ly~td~~~~~~-~~~~~~~~--~~~~~~g~l~ 218 (391)
++.....|+.+|.++++.+.+.....+ ..+. .+++.... .++... ..+. ..+++... ........|+
T Consensus 97 ~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~g~~l~~~~~~~~~~~~~~~--~~~spdg~~~~~~~~~~~~~~~~l~ 171 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQVIYTVDEE---WKGYGTWVANSDCTKLVGIEILK--RDWQPLTSWEKFAEFYHTNPTCRLI 171 (396)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTT---EEEEEEEEECTTSSEEEEEEEEG--GGCCCCCSHHHHHHHHHTCCCEEEE
T ss_pred EEEcCCcEEEEECCCCCcEEEEecccc---cCCCCCEEEeccCCccccccccc--cccCCCCcceeeeeeccCCCcceEE
Confidence 655555699999998876665432111 0011 01111000 000000 0000 00000000 0113456899
Q ss_pred EEeCCCCeEEEeccCCCCcceEEEcc-CCCEEEEEeCC-C----CeEEEEEeccccCccceeecc-cCC-CCCceEeCCC
Q 016318 219 KYDPTTKQTTVLLRNLQFPNGLSLSK-DKSFFVFCEGS-V----GRLHKYWLIGEKAGNLEAFAI-LPG-YPDNVRTNEK 290 (391)
Q Consensus 219 ~~d~~~~~~~~~~~~~~~~ngia~~~-d~~~l~v~et~-~----~~I~~~~~~g~~~g~~~~~~~-~~g-~p~~i~~d~~ 290 (391)
.+|.++++.+.+.........++++| |++.++++... . .+|+.+++++.+ ...+.. .++ .+..+.++++
T Consensus 172 ~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 172 KVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---VRKIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp EEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---CEESSCCCTTEEEEEEEECTT
T ss_pred EEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---eeEeeccCCCccccceEECCC
Confidence 99999988877765555567889999 77755554332 2 479999876532 222221 111 2344688999
Q ss_pred CC-EEEE
Q 016318 291 GE-FWVA 296 (391)
Q Consensus 291 G~-lwva 296 (391)
|+ ++.+
T Consensus 249 g~~l~~~ 255 (396)
T 3c5m_A 249 GSAMAYV 255 (396)
T ss_dssp SSCEEEE
T ss_pred CCEEEEE
Confidence 98 4444
No 263
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.82 E-value=0.00075 Score=58.42 Aligned_cols=168 Identities=16% Similarity=0.061 Sum_probs=94.8
Q ss_pred hhccccceeccccccCcceEEEccCCCeeEEEecCCEEEEEeCCc--eeEEEeecCCCcccCCCCCCccccccccCccCc
Q 016318 55 NLLQNSEIKFLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLK--WTDFAFTSNNRSELCNPKPIATSYLKNEHICGR 132 (391)
Q Consensus 55 ~~l~~~~~~~~~~~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 132 (391)
+=+.++.++..+.+..-.+++++|+|. ||+- .+|.++++++.. ....... ......|. -..
T Consensus 27 ~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~G--------------w~~ 89 (236)
T 1tl2_A 27 NWLARATLIGKGGWSNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGG--------------WNQ 89 (236)
T ss_dssp CHHHHSEEEESSSCTTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSC--------------GGG
T ss_pred chhhhccccCccccccceeEEECCCcc-EEEE-eCCeEEEECCCCCCccccccc-ccEecccc--------------ccc
Confidence 345677777776688889999999998 8887 889999998741 0000000 00000000 011
Q ss_pred cceEEEecCCCcEEEEECCCCeEEEeCCCCeeEEc-e--eccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeec
Q 016318 133 PLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSL-A--TEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVF 209 (391)
Q Consensus 133 P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~-~--~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~ 209 (391)
=..+.||+ +|.||+.. ...|+++++.+..-... . +.+...-......|.++++|+||..+ .
T Consensus 90 F~a~~fD~-~G~LYav~-dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-d------------- 153 (236)
T 1tl2_A 90 FQFLFFDP-NGYLYAVS-KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-G------------- 153 (236)
T ss_dssp CSEEEECT-TSCEEEEE-TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-T-------------
T ss_pred ceEEEECC-CCCEEEeC-CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-C-------------
Confidence 24688998 89999993 44499999843211111 1 11111111234778999999999998 3
Q ss_pred ccCCCceEEEEeCCCCe-------EEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEE
Q 016318 210 SAEDTGRVLKYDPTTKQ-------TTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYW 263 (391)
Q Consensus 210 ~~~~~g~l~~~d~~~~~-------~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~ 263 (391)
|.+++-.+-++. ...+. .+-..-.-+.+++++. ||..+ +.+|++..
T Consensus 154 -----g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 154 -----QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GGKFYEDY 207 (236)
T ss_dssp -----TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TTEEEEES
T ss_pred -----CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc-EEEEe--CCeEEecC
Confidence 455553332111 11111 2222222355788887 66665 56777763
No 264
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.82 E-value=0.0037 Score=59.59 Aligned_cols=193 Identities=9% Similarity=-0.050 Sum_probs=107.1
Q ss_pred EccCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE-EECCCC
Q 016318 76 FDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI-ADAYFG 153 (391)
Q Consensus 76 ~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V-~d~~~g 153 (391)
+..+++.+.++..++.+..++.. ........ ........++.+.+ +++.++ +...+.
T Consensus 195 ~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~--------------------~~h~~~~~~~~~~~-~g~~l~s~~~D~~ 253 (420)
T 4gga_A 195 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATL--------------------SGHSQEVCGLRWAP-DGRHLASGGNDNL 253 (420)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEE--------------------ECCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred EeeCCCEEEEEeCCCceeEeeecccceeeEEe--------------------cccccceeeeeecC-CCCeeeeeecccc
Confidence 33455666667777777766654 11111111 11123455777877 555444 444445
Q ss_pred eEEEeCCCCeeEEceeccCCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEecc
Q 016318 154 LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLR 232 (391)
Q Consensus 154 l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~ 232 (391)
+..++..+++..................++..+++ ++..+.++ ..++.|..||..+++......
T Consensus 254 v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g---------------s~D~~I~iwd~~t~~~~~~~~ 318 (420)
T 4gga_A 254 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG---------------TSDRHIRIWNVCSGACLSAVD 318 (420)
T ss_dssp EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEEC---------------TTTCEEEEEETTTTEEEEEEE
T ss_pred ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEee---------------cCCCEEEEEeCCccccceeec
Confidence 77777765532211000000111235667777754 55554322 235788899999988766665
Q ss_pred CCCCcceEEEccCCCEEEEEeC-CCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcCCCchhhh
Q 016318 233 NLQFPNGLSLSKDKSFFVFCEG-SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLYSH 306 (391)
Q Consensus 233 ~~~~~ngia~~~d~~~l~v~et-~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~ 306 (391)
.......++++++++.++++.. ..+.|..++.... .....+....+....++++++|++.++......+.+|
T Consensus 319 ~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~--~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriW 391 (420)
T 4gga_A 319 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM--AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 391 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC--cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 5567778899999997776643 4567888875431 1112222112334568899999977766555554443
No 265
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.0018 Score=67.17 Aligned_cols=139 Identities=12% Similarity=0.004 Sum_probs=81.9
Q ss_pred CccceEEEecCCCcEEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeee
Q 016318 131 GRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLV 208 (391)
Q Consensus 131 g~P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~ 208 (391)
+...++++++++..|..+...+.|..+|..++..+..... .+ ....+..+++.++ |++.++.+.
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l-~~-h~~~V~~l~~s~~~~~~~l~s~s~------------ 75 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TG-HEGPVWRVDWAHPKFGTILASCSY------------ 75 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEE-CC-CSSCEEEEEECCTTSCSEEEEEET------------
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceec-cC-CcCceEEEEecCCCCCCEEEEEeC------------
Confidence 4567888888434455555444477777764433332211 11 1234677888776 877777643
Q ss_pred cccCCCceEEEEeCCCCeEE---EeccCCCCcceEEEccC--CCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCC
Q 016318 209 FSAEDTGRVLKYDPTTKQTT---VLLRNLQFPNGLSLSKD--KSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPD 283 (391)
Q Consensus 209 ~~~~~~g~l~~~d~~~~~~~---~~~~~~~~~ngia~~~d--~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~ 283 (391)
+|.|..||..+++.. .+.........++++|+ ++.++.+ +..+.|..+++..........+...++...
T Consensus 76 -----Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sg-s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~ 149 (753)
T 3jro_A 76 -----DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (753)
T ss_dssp -----TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCSSSCCCCEEEECCSSCEE
T ss_pred -----CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEE-eCCCcEEEEEeecCCCcceeEeecCCCceE
Confidence 578888998887532 22233446678999999 8866555 567789988876542222222222233344
Q ss_pred ceEeCC
Q 016318 284 NVRTNE 289 (391)
Q Consensus 284 ~i~~d~ 289 (391)
.+..++
T Consensus 150 ~l~~~p 155 (753)
T 3jro_A 150 SASWAP 155 (753)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 566666
No 266
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.00066 Score=67.44 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=95.1
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCC-c-e-----eEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCC
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGL-K-W-----TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~-~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g 143 (391)
-.+++++|||+.+++++.||.|..|+.. + . -.+.....+ .....+....+++++ +|
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~----------------~~gh~~~V~sVawSP-dg 194 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS----------------DAGSKDWVTHIVWYE-DV 194 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS----------------CTTCCCCEEEEEEET-TE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc----------------cccccccEEEEEEcC-Cc
Confidence 5689999999999999999999999876 2 1 011111000 011124678999998 67
Q ss_pred cEEEEECCCCeEEEeCCCCeeEEceecc-CCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 144 DLYIADAYFGLMKVGPEGGLATSLATEA-EGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 144 ~L~V~d~~~gl~~~d~~~g~~~~~~~~~-~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
|.++...+.+..++.+++......... .+. -..+.++++. |+..++.+ ++.|..||.
T Consensus 195 -Laass~D~tVrlWd~~~~~~~~~~~tL~~~h-~~~V~svaFs--g~~LASa~------------------~~tIkLWd~ 252 (588)
T 2j04_A 195 -LVAALSNNSVFSMTVSASSHQPVSRMIQNAS-RRKITDLKIV--DYKVVLTC------------------PGYVHKIDL 252 (588)
T ss_dssp -EEEEETTCCEEEECCCSSSSCCCEEEEECCC-SSCCCCEEEE--TTEEEEEC------------------SSEEEEEET
T ss_pred -EEEEeCCCeEEEEECCCCccccceeeecccc-cCcEEEEEEE--CCEEEEEe------------------CCeEEEEEC
Confidence 767766678999999877632100011 111 1357788887 45555543 378999999
Q ss_pred CCCeEEEec-cCCCCcceEEE--ccCCCEEEEEe
Q 016318 223 TTKQTTVLL-RNLQFPNGLSL--SKDKSFFVFCE 253 (391)
Q Consensus 223 ~~~~~~~~~-~~~~~~ngia~--~~d~~~l~v~e 253 (391)
.+++...+. ......++|++ +||+..+.++.
T Consensus 253 ~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 253 KNYSISSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp TTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 988886655 44456778999 99998666653
No 267
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.78 E-value=0.0076 Score=61.89 Aligned_cols=190 Identities=11% Similarity=0.043 Sum_probs=101.2
Q ss_pred ceEEEccCCCeeEEEec-CC----EEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEE
Q 016318 72 ESMAFDPLGRGPYTGVA-DG----RILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~-~g----~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~ 146 (391)
.+++++|||+.+.++.. +| .|+.++...-....... ......++++++++..|+
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~---------------------~~~~~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL---------------------ERVKFSCMAWTHDGKGMF 186 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE---------------------EEECSCCEEECTTSSEEE
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc---------------------cCcccceEEEEeCCCEEE
Confidence 46789999996655544 33 78888766211111100 011134678888445577
Q ss_pred EEECCCC----------------eEEEeCCCCeeE--EceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheee
Q 016318 147 IADAYFG----------------LMKVGPEGGLAT--SLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 147 V~d~~~g----------------l~~~d~~~g~~~--~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~ 207 (391)
++..... |++++..+++.+ .+....+ ...+..++.+++||+ |+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~--~~~~~~~~~~SpDg~~l~~~~~~~---------- 254 (710)
T 2xdw_A 187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD--EPKWMGGAELSDDGRYVLLSIREG---------- 254 (710)
T ss_dssp EEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT--CTTCEEEEEECTTSCEEEEEEECS----------
T ss_pred EEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC--CCeEEEEEEEcCCCCEEEEEEEcc----------
Confidence 6654433 888888776532 2211111 112345788899996 44443210
Q ss_pred ecccCCCceEEEEeCCC------C--eEEEeccCCCCcceEEEccCCCEEEEEeCC---CCeEEEEEeccccCccceeec
Q 016318 208 VFSAEDTGRVLKYDPTT------K--QTTVLLRNLQFPNGLSLSKDKSFFVFCEGS---VGRLHKYWLIGEKAGNLEAFA 276 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~------~--~~~~~~~~~~~~ngia~~~d~~~l~v~et~---~~~I~~~~~~g~~~g~~~~~~ 276 (391)
...+..++.+|.++ + +.+.+....... .-.+++||+.+|+.... +.+|+++++++......+.+.
T Consensus 255 ---~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 255 ---CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ---SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred ---CCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 01145788888765 4 455554333222 23578899988887543 347999987653211222222
Q ss_pred -ccCC-CCCceEeCCCCCEEEEEc
Q 016318 277 -ILPG-YPDNVRTNEKGEFWVAIH 298 (391)
Q Consensus 277 -~~~g-~p~~i~~d~~G~lwva~~ 298 (391)
..+. ...++...+++.+++...
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEE
Confidence 1111 223455555566655543
No 268
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.77 E-value=0.022 Score=52.98 Aligned_cols=212 Identities=5% Similarity=-0.052 Sum_probs=106.8
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
.-.+++++++|+.+.++..+ ++..|+.+......... ......+.+..+.+.+.++.
T Consensus 21 ~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQE----------------------MRHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp CCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEE----------------------CSCCCEEEECTTSSEEEEEC
T ss_pred ceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeee----------------------cCCeEEEEEcCCCCEEEEEE
Confidence 45689999999966666655 46666655222221110 00122344444233343433
Q ss_pred CC-CCeEEEeCCCCeeEEceeccCCC--c-ccCCcceeecCCCCEEEEeCCCc-ccchh------------heeeecccC
Q 016318 150 AY-FGLMKVGPEGGLATSLATEAEGV--P-LRFTNDLDIDDEGNVYFTDSSTN-YQRRN------------FMQLVFSAE 212 (391)
Q Consensus 150 ~~-~gl~~~d~~~g~~~~~~~~~~~~--~-~~~~~~l~~d~~G~ly~td~~~~-~~~~~------------~~~~~~~~~ 212 (391)
.. ..|..+|..+++....... ... . ...++.+++..++.+++=+.... -.... .......+.
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~~-~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~ 156 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIKV-DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEF 156 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESS
T ss_pred CCccEEEEEECCCCcEEEEEEC-CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCC
Confidence 33 3477788877754322111 110 0 00122233333444444442211 00000 001111146
Q ss_pred CCceEEEEeCCCCe-----------------EEEeccCCCCcceEEEccCCCEEEEEeCCCCe-EEEEEeccccCcccee
Q 016318 213 DTGRVLKYDPTTKQ-----------------TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGR-LHKYWLIGEKAGNLEA 274 (391)
Q Consensus 213 ~~g~l~~~d~~~~~-----------------~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~-I~~~~~~g~~~g~~~~ 274 (391)
.+|.|..||..+++ ...+...-...+.++++||++++..+ ...+. |..+++... .....
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~-s~d~~~v~iwd~~~~--~~~~~ 233 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC-SQDGTIIRVFKTEDG--VLVRE 233 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE-ETTCSEEEEEETTTC--CEEEE
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE-eCCCCEEEEEECCCC--cEEEE
Confidence 67889999988765 34444444566899999999955544 55566 777775431 11222
Q ss_pred ec-c-cCCCCCceEeCCCCCEEEEEcCCCchhhhhh
Q 016318 275 FA-I-LPGYPDNVRTNEKGEFWVAIHCRRSLYSHLM 308 (391)
Q Consensus 275 ~~-~-~~g~p~~i~~d~~G~lwva~~~~~~~~~~~l 308 (391)
+. . ..+....++++++|++.++......+.++.+
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 32 1 2334456889999998777666555554434
No 269
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.0055 Score=56.40 Aligned_cols=156 Identities=11% Similarity=0.048 Sum_probs=91.4
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCc-------eeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLK-------WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~ 142 (391)
.-.++++.++|+.+.+++.|+.|..|+... ...... .....+...++++++ +
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~--------------------~~~h~~~V~~v~~sp-~ 118 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAI--------------------IEGHENEVKGVAWSN-D 118 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEE--------------------EC----CEEEEEECT-T
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEE--------------------EcCCCCcEEEEEECC-C
Confidence 356899999999899999999999987641 011110 111234567899998 5
Q ss_pred CcEEE-EECCCCeEEEeCC-CCe-eEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 143 GDLYI-ADAYFGLMKVGPE-GGL-ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 143 g~L~V-~d~~~gl~~~d~~-~g~-~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
+++++ +.....|..+|.. ++. .+.+.. ..+ .....+.+++.++|++.++.+. ++.+..
T Consensus 119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~-~~~-h~~~v~~v~~~p~~~~l~s~s~-----------------D~~i~i 179 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDESGEEYECISV-LQE-HSQDVKHVIWHPSEALLASSSY-----------------DDTVRI 179 (330)
T ss_dssp SCEEEEEETTSCEEEEECCTTCCCCEEEEE-ECC-CSSCEEEEEECSSSSEEEEEET-----------------TSCEEE
T ss_pred CCEEEEEeCCCEEEEEeccCCCCCeEEEEE-ecc-CCCceEEEEECCCCCEEEEEcC-----------------CCeEEE
Confidence 66544 4444458888873 221 122111 111 1134678899999988777643 467777
Q ss_pred EeCCCCeE---EEeccCCCCcceEEEccC--CCEEEEEeCCCCeEEEEEecc
Q 016318 220 YDPTTKQT---TVLLRNLQFPNGLSLSKD--KSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 220 ~d~~~~~~---~~~~~~~~~~ngia~~~d--~~~l~v~et~~~~I~~~~~~g 266 (391)
||..++.. ..+.........++++|+ +..+ ++-...+.|..+++.+
T Consensus 180 W~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 180 WKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL-CSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE-EEEETTSCEEEEEEEE
T ss_pred EECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE-EEEeCCCeEEEEEecC
Confidence 77655532 233333345678899998 5534 4434556666666543
No 270
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.76 E-value=0.0057 Score=55.95 Aligned_cols=203 Identities=8% Similarity=-0.011 Sum_probs=99.3
Q ss_pred cceEEEcc--CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCC-CcE
Q 016318 71 PESMAFDP--LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT-GDL 145 (391)
Q Consensus 71 Pe~i~~d~--~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~-g~L 145 (391)
-.++++.+ +|+.+.+++.|+.|..|+.. .+...... ....+...++++++++ +.+
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~--------------------~~h~~~V~~v~~~p~~~g~~ 119 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEH--------------------AGHDSSVNSVCWAPHDYGLI 119 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEE--------------------CCCSSCCCEEEECCTTTCSC
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEc--------------------cCCCCceEEEEECCCCCCcE
Confidence 34677764 47889999999999999875 12221111 0112446788998732 454
Q ss_pred EEEECC-CCeEEEeCCCCe-eEEceeccCCCcccCCcceeecCCC---CEEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 146 YIADAY-FGLMKVGPEGGL-ATSLATEAEGVPLRFTNDLDIDDEG---NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 146 ~V~d~~-~gl~~~d~~~g~-~~~~~~~~~~~~~~~~~~l~~d~~G---~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
+++... ..|..++..++. .+... ...+. ....+.++..+++ .+.....+ ..+ .....++.+..++.+..|
T Consensus 120 lasgs~D~~i~lwd~~~~~~~~~~~-~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~l~sgs~D~~v~lW 194 (316)
T 3bg1_A 120 LACGSSDGAISLLTYTGEGQWEVKK-INNAH-TIGCNAVSWAPAVVPGSLIDHPSG-QKP--NYIKRFASGGCDNLIKLW 194 (316)
T ss_dssp EEEECSSSCEEEEEECSSSCEEECC-BTTSS-SSCBCCCEECCCCCC------CCS-CCC--CCCCBEECCBTTSBCCEE
T ss_pred EEEEcCCCCEEEEecCCCCCcceee-eeccc-cCCcceEEEccccCCccccccccc-cCc--cccceEEEecCCCeEEEE
Confidence 444344 447777766542 22111 11111 1234555665542 11000000 000 000011222335666667
Q ss_pred eCCCC-eE---EEeccCCCCcceEEEccCC----CEEEEEeCCCCeEEEEEeccccCcc--ceeecccCCCCCceEeCCC
Q 016318 221 DPTTK-QT---TVLLRNLQFPNGLSLSKDK----SFFVFCEGSVGRLHKYWLIGEKAGN--LEAFAILPGYPDNVRTNEK 290 (391)
Q Consensus 221 d~~~~-~~---~~~~~~~~~~ngia~~~d~----~~l~v~et~~~~I~~~~~~g~~~g~--~~~~~~~~g~p~~i~~d~~ 290 (391)
|..++ +. ..+...-...+.++++|++ + ++++-...+.|..+++.....+. .+.+....+....++++++
T Consensus 195 d~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~ 273 (316)
T 3bg1_A 195 KEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS-TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT 273 (316)
T ss_dssp EECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC-EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTT
T ss_pred EeCCCCccceeeecccCCCceEEEEecCCCCCCCc-eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCC
Confidence 76543 21 1222222356789999986 5 44554566788877765421111 1222222334456778888
Q ss_pred CCEEEEEcC
Q 016318 291 GEFWVAIHC 299 (391)
Q Consensus 291 G~lwva~~~ 299 (391)
|++.++...
T Consensus 274 g~~las~~~ 282 (316)
T 3bg1_A 274 ANILAVSGG 282 (316)
T ss_dssp TCCEEEEES
T ss_pred CCEEEEEcC
Confidence 876655444
No 271
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.76 E-value=0.0026 Score=61.22 Aligned_cols=147 Identities=12% Similarity=0.105 Sum_probs=93.6
Q ss_pred EEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCe
Q 016318 75 AFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (391)
Q Consensus 75 ~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl 154 (391)
++.++++.++++..+|.|..|+......+.... ........+++++++..|+++.....|
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~l~sg~~dg~i 334 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS--------------------GHTDRIYSTIYDHERKRCISASMDTTI 334 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--------------------CCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 456778889999999999999876333322211 113446788999843345555555559
Q ss_pred EEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccCC
Q 016318 155 MKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNL 234 (391)
Q Consensus 155 ~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~ 234 (391)
..+|..+++........ ......++.+ ++..++.+. +|.+..||..+++........
T Consensus 335 ~vwd~~~~~~~~~~~~h----~~~v~~~~~~--~~~l~s~s~-----------------dg~v~vwd~~~~~~~~~~~~~ 391 (464)
T 3v7d_B 335 RIWDLENGELMYTLQGH----TALVGLLRLS--DKFLVSAAA-----------------DGSIRGWDANDYSRKFSYHHT 391 (464)
T ss_dssp EEEETTTTEEEEEECCC----SSCEEEEEEC--SSEEEEEET-----------------TSEEEEEETTTCCEEEEEECT
T ss_pred EEEECCCCcEEEEEeCC----CCcEEEEEEc--CCEEEEEeC-----------------CCcEEEEECCCCceeeeecCC
Confidence 99999877543322111 1234556665 455555432 578999999887655444444
Q ss_pred CCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 235 QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 235 ~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
.....++++++++.+..+. .+.|..+++..
T Consensus 392 ~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~ 421 (464)
T 3v7d_B 392 NLSAITTFYVSDNILVSGS--ENQFNIYNLRS 421 (464)
T ss_dssp TCCCEEEEEECSSEEEEEE--TTEEEEEETTT
T ss_pred CCccEEEEEeCCCEEEEec--CCeEEEEECCC
Confidence 4566788999999665554 57888888654
No 272
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.74 E-value=0.033 Score=53.18 Aligned_cols=144 Identities=10% Similarity=0.006 Sum_probs=86.1
Q ss_pred EEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCe
Q 016318 75 AFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (391)
Q Consensus 75 ~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl 154 (391)
++..+|+.+++++.+|.|..|+........... ...+....+.++ ++.|+.+.....|
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~--~~~l~s~~~dg~i 181 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV--------------------GHTGGVWSSQMR--DNIIISGSTDRTL 181 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECC--------------------CCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEc--------------------CCCCCEEEEEec--CCEEEEEeCCCeE
Confidence 455568889999999999999876322222111 112345677776 3556666655669
Q ss_pred EEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEec-cC
Q 016318 155 MKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL-RN 233 (391)
Q Consensus 155 ~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~ 233 (391)
..+|..+++......... .....++.+ ++..++.+. +|.+..||..+++..... ..
T Consensus 182 ~vwd~~~~~~~~~~~~h~----~~v~~~~~~--~~~l~s~s~-----------------dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 182 KVWNAETGECIHTLYGHT----STVRCMHLH--EKRVVSGSR-----------------DATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEEETTTTEEEEEECCCS----SCEEEEEEE--TTEEEEEET-----------------TSEEEEEESSSCCEEEEEECC
T ss_pred EEEECCcCcEEEEECCCC----CcEEEEEec--CCEEEEEeC-----------------CCEEEEEECCCCcEEEEEcCC
Confidence 999998875433222111 134455554 344444322 578999998877654433 22
Q ss_pred CCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 234 LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 234 ~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
....+.+++ +++.++.+ +..+.|..+++..
T Consensus 239 ~~~v~~~~~--~~~~l~~~-~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 239 VAAVRCVQY--DGRRVVSG-AYDFMVKVWDPET 268 (445)
T ss_dssp SSCEEEEEE--CSSCEEEE-ETTSCEEEEEGGG
T ss_pred cccEEEEEE--CCCEEEEE-cCCCEEEEEECCC
Confidence 334456666 67756555 5567888887653
No 273
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.74 E-value=0.011 Score=54.39 Aligned_cols=150 Identities=8% Similarity=-0.026 Sum_probs=87.7
Q ss_pred cCcceEEEccCCCeeEEEecC-----CEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC
Q 016318 69 QGPESMAFDPLGRGPYTGVAD-----GRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~-----g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~ 141 (391)
....+++++|||+.+++...+ ..|+.++.+ ....+... .. ..+++++++
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-----------------------~~-~~~~~wspd 114 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-----------------------KN-IRSLEWNED 114 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-----------------------SE-EEEEEECTT
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-----------------------CC-ccceeECCC
Confidence 345678999999866655432 247777765 22222111 11 456788874
Q ss_pred CCcEEEEEC---------------------------CCCeEEEeCCCCee-EEceeccCCCcccCCcceeecCCCCEEEE
Q 016318 142 TGDLYIADA---------------------------YFGLMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDDEGNVYFT 193 (391)
Q Consensus 142 ~g~L~V~d~---------------------------~~gl~~~d~~~g~~-~~~~~~~~~~~~~~~~~l~~d~~G~ly~t 193 (391)
+..|+++.. ...|+.+|..+++. +.+.. . ....++..++| ++++
T Consensus 115 g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-----~~~~~~~spdg-~~~~ 186 (347)
T 2gop_A 115 SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-----RFSSGIWHRDK-IVVN 186 (347)
T ss_dssp SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--E-----TTCEEEEETTE-EEEE
T ss_pred CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-----CcccccCCCCe-EEEE
Confidence 444655532 13489999998876 55533 1 45678889999 7776
Q ss_pred eCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCC-------CCeEEEEE
Q 016318 194 DSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS-------VGRLHKYW 263 (391)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~-------~~~I~~~~ 263 (391)
.....- . ....+...|+.+| +++.+.+... ... ..++|||+.|+++... ..+|+.++
T Consensus 187 ~~~~~~--~------~~~~~~~~l~~~d--~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 187 VPHREI--I------PQYFKFWDIYIWE--DGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EECCCS--S------CCSSCCEEEEEEE--TTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred Eecccc--c------ccccccccEEEeC--CCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 522100 0 0000135788898 6777666544 222 2338999987766433 35788886
No 274
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.63 E-value=0.00039 Score=71.40 Aligned_cols=136 Identities=10% Similarity=0.001 Sum_probs=84.8
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~ 148 (391)
+.++.+.++|+ +++...++.|+.++.. ....+.... .. .......+++++++..|.++
T Consensus 18 ~~~~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~-----------------~~--~~~~~~~~~~SpDg~~la~~ 77 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQSADNNIVLYNIETGQSYTILSNR-----------------TM--KSVNASNYGLSPDRQFVYLE 77 (719)
T ss_dssp CCCCEESSSSE-EEEECTTSCEEEEESSSCCEEEEECHH-----------------HH--HTTTCSEEEECTTSSEEEEE
T ss_pred CCccEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccc-----------------cc--cccceeeEEECCCCCeEEEE
Confidence 44778889997 5555578899999876 222221100 00 00124578899843345554
Q ss_pred EC---------CCCeEEEeCCCCee---EEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCc
Q 016318 149 DA---------YFGLMKVGPEGGLA---TSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 149 d~---------~~gl~~~d~~~g~~---~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
.. ...|+.+|.++++. +.+. .....+++.|||+ |.++. ++
T Consensus 78 ~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~--------~~~~~~~~SPDG~~la~~~-------------------~~ 130 (719)
T 1z68_A 78 SDYSKLWRYSYTATYYIYDLSNGEFVRGNELP--------RPIQYLCWSPVGSKLAYVY-------------------QN 130 (719)
T ss_dssp EEEEECSSSCEEEEEEEEETTTTEECCSSCCC--------SSBCCEEECSSTTCEEEEE-------------------TT
T ss_pred ecCceeEEeecceEEEEEECCCCccccceecC--------cccccceECCCCCEEEEEE-------------------CC
Confidence 33 13489999998875 3331 2367789999995 54443 25
Q ss_pred eEEEEeCCCCeEEEeccCC-------------------CCcceEEEccCCCEEEEEe
Q 016318 216 RVLKYDPTTKQTTVLLRNL-------------------QFPNGLSLSKDKSFFVFCE 253 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~~-------------------~~~ngia~~~d~~~l~v~e 253 (391)
.|+.++..+++...+.... ....+++++|||+.|+++.
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 7889998887766554221 1125899999999887764
No 275
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.59 E-value=0.014 Score=54.29 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=52.1
Q ss_pred CCcceeecCCCCEEEEeCCCcccchhheeeecccCCCce-EEEEeCCCCeEEEecc---CCCCcceEEEccCCCEEEEEe
Q 016318 178 FTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGR-VLKYDPTTKQTTVLLR---NLQFPNGLSLSKDKSFFVFCE 253 (391)
Q Consensus 178 ~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~-l~~~d~~~~~~~~~~~---~~~~~ngia~~~d~~~l~v~e 253 (391)
.+..++++++|++.++.+. ++. +..||..+++...... .....+.++++||++++..+
T Consensus 197 ~v~~~~~s~~g~~l~s~s~-----------------d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~- 258 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQ-----------------DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV- 258 (355)
T ss_dssp CEEEEEECTTSSEEEEEET-----------------TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE-
T ss_pred ceEEEEECCCCCEEEEEeC-----------------CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE-
Confidence 4678888999987777643 577 8889998876544333 33456789999999966555
Q ss_pred CCCCeEEEEEeccc
Q 016318 254 GSVGRLHKYWLIGE 267 (391)
Q Consensus 254 t~~~~I~~~~~~g~ 267 (391)
+..+.|..+++...
T Consensus 259 s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 259 SDKWTLHVFEIFND 272 (355)
T ss_dssp ETTCEEEEEESSCC
T ss_pred ECCCEEEEEEccCC
Confidence 55678888887643
No 276
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.58 E-value=0.00073 Score=67.53 Aligned_cols=119 Identities=15% Similarity=0.224 Sum_probs=81.7
Q ss_pred ccCccceEEEecCCCcEEEEECC---------------------CC-eEEEeCCCCe-------eEEcee---c------
Q 016318 129 ICGRPLGLRFDKKTGDLYIADAY---------------------FG-LMKVGPEGGL-------ATSLAT---E------ 170 (391)
Q Consensus 129 ~~g~P~gi~~d~~~g~L~V~d~~---------------------~g-l~~~d~~~g~-------~~~~~~---~------ 170 (391)
...||-++.+++.++.+|++... .| |++++++++. .+.+.. .
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 35789999999778899998653 13 8888765431 122211 0
Q ss_pred --------cCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccCC--CCcceE
Q 016318 171 --------AEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNL--QFPNGL 240 (391)
Q Consensus 171 --------~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~--~~~ngi 240 (391)
.....+..|.+|++|++|+|||.+.+...... .+....+..++.+++.+++++.+.... ....|+
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~-----~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~ 536 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAG-----DFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGI 536 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSG-----GGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEE
T ss_pred ccccccccCCCCCccCCcceEECCCCCEEEEecCCCcccc-----cccccccceEEEEeCCCCeEEEEEeCCCCccCcCe
Confidence 01124678999999999999999754221111 112234568999999999998876443 467899
Q ss_pred EEccCCCEEEEE
Q 016318 241 SLSKDKSFFVFC 252 (391)
Q Consensus 241 a~~~d~~~l~v~ 252 (391)
+++||+++|||+
T Consensus 537 ~fspDg~tlfvn 548 (592)
T 3zwu_A 537 SFSPDQKTLFVG 548 (592)
T ss_dssp EECTTSSEEEEE
T ss_pred eECCCCCEEEEE
Confidence 999999999886
No 277
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.56 E-value=0.038 Score=52.71 Aligned_cols=144 Identities=13% Similarity=0.114 Sum_probs=83.2
Q ss_pred EEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECCCCe
Q 016318 75 AFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (391)
Q Consensus 75 ~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~~gl 154 (391)
++..+|+.++++..+|.|..|+....+...... ...+....+.++ ++.|+++.....|
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~--------------------~h~~~v~~l~~~--~~~l~sg~~dg~i 195 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT--------------------GHTGSVLCLQYD--ERVIITGSSDSTV 195 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEEC--------------------CCSSCEEEEECC--SSEEEEEETTSCE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc--------------------CCCCcEEEEEEC--CCEEEEEcCCCeE
Confidence 455578889999999999999876322222111 012334566663 4556666655569
Q ss_pred EEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE----Ee
Q 016318 155 MKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT----VL 230 (391)
Q Consensus 155 ~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~----~~ 230 (391)
..+|..+++........ ......++++ ++..++.+. +|.+..||..+++.. .+
T Consensus 196 ~vwd~~~~~~~~~~~~h----~~~v~~l~~~--~~~l~s~s~-----------------dg~i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 196 RVWDVNTGEMLNTLIHH----CEAVLHLRFN--NGMMVTCSK-----------------DRSIAVWDMASPTDITLRRVL 252 (435)
T ss_dssp EEEESSSCCEEEEECCC----CSCEEEEECC--TTEEEEEET-----------------TSCEEEEECSSSSCCEEEEEE
T ss_pred EEEECCCCcEEEEEcCC----CCcEEEEEEc--CCEEEEeeC-----------------CCcEEEEeCCCCCCceeeeEe
Confidence 99998877543322111 1234455554 334444322 578888998766532 22
Q ss_pred ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 231 LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 231 ~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
.......+.+++ +++.++.+ +..+.|..+++..
T Consensus 253 ~~~~~~v~~~~~--~~~~l~s~-~~dg~i~vwd~~~ 285 (435)
T 1p22_A 253 VGHRAAVNVVDF--DDKYIVSA-SGDRTIKVWNTST 285 (435)
T ss_dssp CCCSSCEEEEEE--ETTEEEEE-ETTSEEEEEETTT
T ss_pred cCCCCcEEEEEe--CCCEEEEE-eCCCeEEEEECCc
Confidence 222233455665 77766655 5567888888653
No 278
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.53 E-value=0.0024 Score=62.19 Aligned_cols=159 Identities=17% Similarity=0.182 Sum_probs=89.8
Q ss_pred cCccceEEEecCCC--cEEEEECCCCeEEEeCCCCee-EEcee---cc-CC---CcccCCcceeecCC----CCEEEEeC
Q 016318 130 CGRPLGLRFDKKTG--DLYIADAYFGLMKVGPEGGLA-TSLAT---EA-EG---VPLRFTNDLDIDDE----GNVYFTDS 195 (391)
Q Consensus 130 ~g~P~gi~~d~~~g--~L~V~d~~~gl~~~d~~~g~~-~~~~~---~~-~~---~~~~~~~~l~~d~~----G~ly~td~ 195 (391)
...|.+|++.+ +| +|||+.....|++++.++... +.+.. .. .+ .....+-+|+++++ |.||++-+
T Consensus 13 L~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 13 LRQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp ESSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 56799999998 55 599998765588888765421 12211 11 11 00234567999985 89999853
Q ss_pred CCcccchhheeeecccCCCceEEEEeCCCC--------eEEEecc-----CCCCcceEEEccCCCEEEEEeCC-------
Q 016318 196 STNYQRRNFMQLVFSAEDTGRVLKYDPTTK--------QTTVLLR-----NLQFPNGLSLSKDKSFFVFCEGS------- 255 (391)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--------~~~~~~~-----~~~~~ngia~~~d~~~l~v~et~------- 255 (391)
...-.... -......+|.||....+ +.+++.+ .......|+++|||. |||+--.
T Consensus 92 ~~~~~~~~-----~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~~~~~~~ 165 (463)
T 2wg3_C 92 TNQERWAI-----GPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDGMITLDD 165 (463)
T ss_dssp ECCCSSCS-----SSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCTTCCHHH
T ss_pred CCCCCccc-----CCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCCCCCCCc
Confidence 21000000 00000136766654321 1223321 224556799999997 9998322
Q ss_pred ----------CCeEEEEEecccc------C-----------ccceeecccCCCCCceEeCCC-----CCEEE
Q 016318 256 ----------VGRLHKYWLIGEK------A-----------GNLEAFAILPGYPDNVRTNEK-----GEFWV 295 (391)
Q Consensus 256 ----------~~~I~~~~~~g~~------~-----------g~~~~~~~~~g~p~~i~~d~~-----G~lwv 295 (391)
.+.|+|++.+|.. . ...++|+.--.-|-++++|+. |.+|+
T Consensus 166 ~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~ 237 (463)
T 2wg3_C 166 MEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTI 237 (463)
T ss_dssp HHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEE
T ss_pred cccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEE
Confidence 3579999998731 0 124566531124889999987 65554
No 279
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.028 Score=53.37 Aligned_cols=163 Identities=10% Similarity=0.014 Sum_probs=93.4
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCC-----ceeEEEeecCCCcccCCCCCCccccccccC--ccCccceEE--Eec
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGL-----KWTDFAFTSNNRSELCNPKPIATSYLKNEH--ICGRPLGLR--FDK 140 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~P~gi~--~d~ 140 (391)
...++++.++++.+++++.||.|..|+.. ........... . .+...+ .......+. +.+
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i--~----------~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECI--R----------KINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEE--E----------EEEGGGGSSCCCEEEEEEEECS
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccccee--E----------EEEccCcccccCceEEEEEEcC
Confidence 45688999999989999999999888652 11111000000 0 000000 123344444 334
Q ss_pred CCCc-EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 141 KTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 141 ~~g~-L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
+++ |+++.....|..+|..+++........ .....+..++++++|++.++.+. +|.|..
T Consensus 181 -~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~~~-----------------dg~i~i 240 (437)
T 3gre_A 181 -EKSLLVALTNLSRVIIFDIRTLERLQIIENS--PRHGAVSSICIDEECCVLILGTT-----------------RGIIDI 240 (437)
T ss_dssp -SCEEEEEEETTSEEEEEETTTCCEEEEEECC--GGGCCEEEEEECTTSCEEEEEET-----------------TSCEEE
T ss_pred -CCCEEEEEeCCCeEEEEeCCCCeeeEEEccC--CCCCceEEEEECCCCCEEEEEcC-----------------CCeEEE
Confidence 444 444544455889998877543322210 01235788999999987776543 578999
Q ss_pred EeCCCCeEEEec--cCCCCcceEEEc----cCCCEEEEEeCCCCeEEEEEec
Q 016318 220 YDPTTKQTTVLL--RNLQFPNGLSLS----KDKSFFVFCEGSVGRLHKYWLI 265 (391)
Q Consensus 220 ~d~~~~~~~~~~--~~~~~~ngia~~----~d~~~l~v~et~~~~I~~~~~~ 265 (391)
||..+++..... ..-...+.++++ ++++.+ ++-...+.|..+++.
T Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l-~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 241 WDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIV-VGGSSKTFLTIWNFV 291 (437)
T ss_dssp EETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEE-EEESTTEEEEEEETT
T ss_pred EEcCCccEEEEEecCCCCceEEEEeccccCCCccEE-EEEcCCCcEEEEEcC
Confidence 998887654432 222234567444 566644 444566678888765
No 280
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.50 E-value=0.0051 Score=57.45 Aligned_cols=116 Identities=9% Similarity=-0.040 Sum_probs=69.6
Q ss_pred cceEEEec-CCCcEEEEECC------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhh
Q 016318 133 PLGLRFDK-KTGDLYIADAY------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNF 204 (391)
Q Consensus 133 P~gi~~d~-~~g~L~V~d~~------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~ 204 (391)
...+.+++ +++.|+++... ..|+.++.++++.+.+... .....+..++++++|+ |+++...
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~~~~~~~spdg~~l~~~~~~-------- 258 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH---AEGESCTHEFWIPDGSAMAYVSYF-------- 258 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC---CTTEEEEEEEECTTSSCEEEEEEE--------
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc---CCCccccceEECCCCCEEEEEecC--------
Confidence 44667776 34445544322 2599999888766655431 1112456678999986 6665321
Q ss_pred eeeecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEcc-CCCEEEEEeC---------------CCCeEEEEEecc
Q 016318 205 MQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSK-DKSFFVFCEG---------------SVGRLHKYWLIG 266 (391)
Q Consensus 205 ~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~-d~~~l~v~et---------------~~~~I~~~~~~g 266 (391)
.+...+.|+.+|.++++.+.+... ...+ +++++ ||+.++++.. ....|+++++++
T Consensus 259 -----~~~~~~~l~~~d~~~g~~~~l~~~-~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 259 -----KGQTDRVIYKANPETLENEEVMVM-PPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp -----TTTCCEEEEEECTTTCCEEEEEEC-CSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred -----CCCccceEEEEECCCCCeEEeeeC-CCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 011124599999988877665421 1122 78999 9996655321 336799998765
No 281
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.48 E-value=0.026 Score=50.62 Aligned_cols=217 Identities=9% Similarity=0.001 Sum_probs=113.3
Q ss_pred cCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcc----------c--CCCCC---------Ccccccccc
Q 016318 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSE----------L--CNPKP---------IATSYLKNE 127 (391)
Q Consensus 69 ~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~----------~--~~~~~---------~~~~~~~~~ 127 (391)
..-.++++.++|+.+.+++.||.|..|+....+.+......... . +...+ .........
T Consensus 68 ~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~ 147 (318)
T 4ggc_A 68 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS 147 (318)
T ss_dssp CCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEc
Confidence 45669999999999999999999999987621111111000000 0 00000 000000001
Q ss_pred CccCccceEEEecCCCcEEE-EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCC-CEEEEeCCCcccchhhe
Q 016318 128 HICGRPLGLRFDKKTGDLYI-ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFM 205 (391)
Q Consensus 128 ~~~g~P~gi~~d~~~g~L~V-~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~ 205 (391)
........+.+.+ .+++++ +.....|..+|..+++..................++..+++ ++....+
T Consensus 148 ~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------- 216 (318)
T 4ggc_A 148 GHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG---------- 216 (318)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE----------
T ss_pred CccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe----------
Confidence 1123345566666 455444 44334477778776532211000000011233455555543 4433221
Q ss_pred eeecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeC-CCCeEEEEEeccccCccceeecccCCCCCc
Q 016318 206 QLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEG-SVGRLHKYWLIGEKAGNLEAFAILPGYPDN 284 (391)
Q Consensus 206 ~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et-~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~ 284 (391)
+...+.+..+|..+.+.............++++++++.++++.. ..+.|..+++... .....+....+....
T Consensus 217 -----~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~--~~~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 217 -----GTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM--AKVAELKGHTSRVLS 289 (318)
T ss_dssp -----CTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--CEEEEECCCSSCEEE
T ss_pred -----cCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC--cEEEEEcCCCCCEEE
Confidence 12346677888887776665555556678889999997776643 4567888876431 111222212233456
Q ss_pred eEeCCCCCEEEEEcCCCch
Q 016318 285 VRTNEKGEFWVAIHCRRSL 303 (391)
Q Consensus 285 i~~d~~G~lwva~~~~~~~ 303 (391)
++++++|++.++....+.+
T Consensus 290 l~~spdg~~l~S~s~D~~v 308 (318)
T 4ggc_A 290 LTMSPDGATVASAAADETL 308 (318)
T ss_dssp EEECTTSSCEEEEETTTEE
T ss_pred EEEcCCCCEEEEEecCCeE
Confidence 8899999977765554443
No 282
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.45 E-value=0.055 Score=54.10 Aligned_cols=43 Identities=21% Similarity=0.269 Sum_probs=27.5
Q ss_pred cceEEEEEC-CCCCEEEEEeCCCCCeeeceeEEEEECCEEEEecCC
Q 016318 337 LHAMAVKYS-PEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVL 381 (391)
Q Consensus 337 ~~~~v~~~d-~~g~~~~~~~~~~g~~~~~is~~~~~~g~Lylgs~~ 381 (391)
..+.+.++| .+|+.+..+....+..... .+...+|++|+++..
T Consensus 483 ~dg~l~a~D~~tG~~lw~~~~~~~~~~~p--~~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 483 LDGYLKALDNKDGKELWNFKMPSGGIGSP--MTYSFKGKQYIGSMY 526 (571)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCCcEeee--EEEEECCEEEEEEEC
Confidence 346788888 4688888887654432211 223578999998653
No 283
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.44 E-value=0.0034 Score=60.59 Aligned_cols=157 Identities=11% Similarity=0.054 Sum_probs=92.2
Q ss_pred cceEEEccCCCeeE----EEecCCEEEEEeCCce--------eEEEeecCCCcccCCCCCCccccccccCccCccceEEE
Q 016318 71 PESMAFDPLGRGPY----TGVADGRILFWDGLKW--------TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (391)
Q Consensus 71 Pe~i~~d~~G~~ly----~~~~~g~I~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~ 138 (391)
..+++++++|+.++ ++..++.|..|+.... +.+.... ........+.++++
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-----------------~~~~h~~~V~~v~~ 157 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-----------------LLKDAGGMVIDMKW 157 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-----------------CCCSGGGSEEEEEE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-----------------ccCCCCCceEEEEE
Confidence 67899999999777 5667888888865311 0000000 01112355789999
Q ss_pred ecCCCcEEE-EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceE
Q 016318 139 DKKTGDLYI-ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRV 217 (391)
Q Consensus 139 d~~~g~L~V-~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l 217 (391)
+++++++++ +...+.|..+|..++........ ....+..++.+++|+..++.+. +|.|
T Consensus 158 ~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~----~~~~v~~v~wspdg~~lasgs~-----------------dg~v 216 (434)
T 2oit_A 158 NPTVPSMVAVCLADGSIAVLQVTETVKVCATLP----STVAVTSVCWSPKGKQLAVGKQ-----------------NGTV 216 (434)
T ss_dssp CSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC----GGGCEEEEEECTTSSCEEEEET-----------------TSCE
T ss_pred CCCCCCEEEEEECCCeEEEEEcCCCcceeeccC----CCCceeEEEEcCCCCEEEEEcC-----------------CCcE
Confidence 984366655 44444588889887743211111 1135788999999976665433 5789
Q ss_pred EEEeCCCCeEEEeccCCC-------CcceEEEccCCCEEEEEeCCC------CeEEEEEec
Q 016318 218 LKYDPTTKQTTVLLRNLQ-------FPNGLSLSKDKSFFVFCEGSV------GRLHKYWLI 265 (391)
Q Consensus 218 ~~~d~~~~~~~~~~~~~~-------~~ngia~~~d~~~l~v~et~~------~~I~~~~~~ 265 (391)
..||.+......+..... ....+++++++.++....+.. ..+..+++.
T Consensus 217 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 217 VQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp EEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred EEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 999987333333322111 345778888887655444333 236666654
No 284
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.39 E-value=0.0064 Score=62.78 Aligned_cols=137 Identities=9% Similarity=-0.004 Sum_probs=81.9
Q ss_pred eEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEEC
Q 016318 73 SMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (391)
Q Consensus 73 ~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~ 150 (391)
++.+.++|..++.+ ++.|..++.. +...+..... .........++.+++++..|.++..
T Consensus 21 ~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~Spdg~~l~~~~~ 81 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENST-----------------FDEFGHSINDYSISPDGQFILLEYN 81 (740)
T ss_dssp CEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTT-----------------TTTCCSCCCEEEECTTSSEEEEEEE
T ss_pred ccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechh-----------------hhhhcccccceEECCCCCEEEEEEC
Confidence 67888999866665 8999999876 2222211100 0000112235778884334555432
Q ss_pred C---------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEE
Q 016318 151 Y---------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKY 220 (391)
Q Consensus 151 ~---------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~ 220 (391)
. ..++.+|.++++.+.+.... ......++.|||+ |.++. ++.|+.+
T Consensus 82 ~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~-----~~~~~~~~SPdG~~la~~~-------------------~~~i~~~ 137 (740)
T 4a5s_A 82 YVKQWRHSYTASYDIYDLNKRQLITEERIP-----NNTQWVTWSPVGHKLAYVW-------------------NNDIYVK 137 (740)
T ss_dssp EEECSSSCEEEEEEEEETTTTEECCSSCCC-----TTEEEEEECSSTTCEEEEE-------------------TTEEEEE
T ss_pred CeeeEEEccceEEEEEECCCCcEEEcccCC-----CcceeeEECCCCCEEEEEE-------------------CCeEEEE
Confidence 1 12778999999876553211 1345678899985 55553 2468888
Q ss_pred eCCCCeEEEeccCC-------------------CCcceEEEccCCCEEEEE
Q 016318 221 DPTTKQTTVLLRNL-------------------QFPNGLSLSKDKSFFVFC 252 (391)
Q Consensus 221 d~~~~~~~~~~~~~-------------------~~~ngia~~~d~~~l~v~ 252 (391)
+..+++.+.+.... ....++++||||+.|.++
T Consensus 138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 88777766553211 222458899999987765
No 285
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.39 E-value=0.071 Score=47.93 Aligned_cols=115 Identities=13% Similarity=0.051 Sum_probs=68.3
Q ss_pred CccceEEEecCCCcEEEEECC-CCeEEEeCCCCeeEEceeccCCCcccCCcceeecC--CCCEEEEeCCCcccchhheee
Q 016318 131 GRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD--EGNVYFTDSSTNYQRRNFMQL 207 (391)
Q Consensus 131 g~P~gi~~d~~~g~L~V~d~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~--~G~ly~td~~~~~~~~~~~~~ 207 (391)
+....++|++ +|+++++... ..|..++..++..+.+.. ..+. -...+.+++.+ +|++.++.+.
T Consensus 10 ~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~-l~gH-~~~V~~v~~s~~~~g~~l~s~s~----------- 75 (297)
T 2pm7_B 10 EMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDT-LTGH-EGPVWRVDWAHPKFGTILASCSY----------- 75 (297)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEE-ECCC-SSCEEEEEECCGGGCSEEEEEET-----------
T ss_pred CceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEE-Eccc-cCCeEEEEecCCCcCCEEEEEcC-----------
Confidence 3456889998 5665554444 447777776432111111 1111 12456777764 4777776543
Q ss_pred ecccCCCceEEEEeCCCCeE---EEeccCCCCcceEEEccC--CCEEEEEeCCCCeEEEEEecc
Q 016318 208 VFSAEDTGRVLKYDPTTKQT---TVLLRNLQFPNGLSLSKD--KSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 208 ~~~~~~~g~l~~~d~~~~~~---~~~~~~~~~~ngia~~~d--~~~l~v~et~~~~I~~~~~~g 266 (391)
++.+..||.++++. ..+...-...+.++++|+ ++.+..+ +..+.|..+++..
T Consensus 76 ------D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~-s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 76 ------DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVA-SSDGKVSVVEFKE 132 (297)
T ss_dssp ------TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEEBCS
T ss_pred ------CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEE-ECCCcEEEEEecC
Confidence 57888899877642 223223345678999997 7755544 5567888888754
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.37 E-value=0.085 Score=48.52 Aligned_cols=175 Identities=13% Similarity=0.107 Sum_probs=94.7
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
.+|++++ ++ +|+....|.|++-... .|+...... ...+.+.+|.+.. ++++|++.
T Consensus 83 ~~i~~~~-~~-~~~~g~~g~i~~S~DgG~tW~~~~~~~--------------------~~~~~~~~i~~~~-~~~~~~~~ 139 (327)
T 2xbg_A 83 NSVSFQG-NE-GWIVGEPPIMLHTTDGGQSWSQIPLDP--------------------KLPGSPRLIKALG-NGSAEMIT 139 (327)
T ss_dssp EEEEEET-TE-EEEEEETTEEEEESSTTSSCEECCCCT--------------------TCSSCEEEEEEEE-TTEEEEEE
T ss_pred EEEEecC-Ce-EEEEECCCeEEEECCCCCCceECcccc--------------------CCCCCeEEEEEEC-CCCEEEEe
Confidence 3567764 44 6766667777775332 455432100 0013456777766 67888887
Q ss_pred CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCC-CCeEE
Q 016318 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPT-TKQTT 228 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~~~ 228 (391)
...+|++-.-.+...+.+..... ....+++++++|.+|+.... |.+++-+.. ....+
T Consensus 140 ~~g~v~~S~DgG~tW~~~~~~~~----~~~~~~~~~~~~~~~~~g~~------------------G~~~~S~d~gG~tW~ 197 (327)
T 2xbg_A 140 NVGAIYRTKDSGKNWQALVQEAI----GVMRNLNRSPSGEYVAVSSR------------------GSFYSTWEPGQTAWE 197 (327)
T ss_dssp TTCCEEEESSTTSSEEEEECSCC----CCEEEEEECTTSCEEEEETT------------------SSEEEEECTTCSSCE
T ss_pred CCccEEEEcCCCCCCEEeecCCC----cceEEEEEcCCCcEEEEECC------------------CcEEEEeCCCCCcee
Confidence 65557776544445555432221 23467888888888877632 677776533 23333
Q ss_pred EeccC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecc--cCCCC-----CceEeCCCCCEEEEEc
Q 016318 229 VLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--LPGYP-----DNVRTNEKGEFWVAIH 298 (391)
Q Consensus 229 ~~~~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~--~~g~p-----~~i~~d~~G~lwva~~ 298 (391)
.+... ......++++++++ +|++.. .+.+++...++. +.+.. .|..+ ..+..++++.+|++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~g~-~~~~~~-~G~~~~s~~D~G-----~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 198 PHNRTTSRRLHNMGFTPDGR-LWMIVN-GGKIAFSDPDNS-----ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EEECCSSSCEEEEEECTTSC-EEEEET-TTEEEEEETTEE-----EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred ECCCCCCCccceeEECCCCC-EEEEeC-CceEEEecCCCC-----CeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 33221 23445788888888 666533 456666533321 12221 11111 2355666777887654
No 287
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.01 Score=62.81 Aligned_cols=154 Identities=7% Similarity=-0.083 Sum_probs=98.4
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEEC
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~ 150 (391)
-.++++.+ |+.++++..|+.|..|+...-..+.... ..+....+++++++..|++++.
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~---------------------~~~~V~~v~~sp~g~~l~sgs~ 118 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF---------------------VPGKITSIDTDASLDWMLIGLQ 118 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE---------------------CSSCEEEEECCTTCSEEEEEET
T ss_pred EEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc---------------------CCCCEEEEEECCCCCEEEEEcC
Confidence 45788988 8878999999999999876211111110 0234678889985455677766
Q ss_pred CCCeEEEeCCCCeeEEcee-------ccCCCcccCCcceeecCCC-CEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 151 YFGLMKVGPEGGLATSLAT-------EAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 151 ~~gl~~~d~~~g~~~~~~~-------~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
...|..+|.++++...+.. .........+..+++.+++ .+.++.+. +|.+ .||.
T Consensus 119 dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~-----------------dg~v-lWd~ 180 (902)
T 2oaj_A 119 NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE-----------------YVTL-TYSL 180 (902)
T ss_dssp TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS-----------------SCEE-EEET
T ss_pred CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC-----------------CCcE-EEEC
Confidence 6669999998886542211 0001112357889999864 44444432 4778 9998
Q ss_pred CCCeEEEeccCC-------------------CCcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 016318 223 TTKQTTVLLRNL-------------------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 265 (391)
Q Consensus 223 ~~~~~~~~~~~~-------------------~~~ngia~~~d~~~l~v~et~~~~I~~~~~~ 265 (391)
++++.......- ...+.++++|||+++..+ ...+.|..+++.
T Consensus 181 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg-s~Dg~i~lWd~~ 241 (902)
T 2oaj_A 181 VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI-HEDNSLVFWDAN 241 (902)
T ss_dssp TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE-ETTCCEEEEETT
T ss_pred CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECC
Confidence 887654332211 346789999999955544 556778887764
No 288
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.31 E-value=0.08 Score=54.09 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=26.6
Q ss_pred ccceEEEEEC-CCCCEEEEEeCCCCCeeeceeEEEEECCEEEEec
Q 016318 336 RLHAMAVKYS-PEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGS 379 (391)
Q Consensus 336 ~~~~~v~~~d-~~g~~~~~~~~~~g~~~~~is~~~~~~g~Lylgs 379 (391)
...+.+.++| .+|+.+..+....+..... ...+.+|+.|++.
T Consensus 495 ~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p--~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 495 TADGRLVAYHAATGEKLWEAPTGTGVVAAP--STYMVDGRQYVSV 537 (677)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEE
T ss_pred CCCCcEEEEECCCCceeeeeeCCCCcccCC--EEEEeCCEEEEEE
Confidence 3446677888 4688888887665543222 2235788888864
No 289
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.23 E-value=0.004 Score=53.88 Aligned_cols=107 Identities=15% Similarity=0.009 Sum_probs=69.6
Q ss_pred ccceEEEecCCCcEEEEECCCCeEEEeCCCCeeEEcee---ccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeee
Q 016318 132 RPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLAT---EAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLV 208 (391)
Q Consensus 132 ~P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~~~~~~---~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~ 208 (391)
....++|++ +|.||+. ....|+++++.++.-..... .+...-......+.+|++|.||+++
T Consensus 42 ~~~~laf~P-~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~-------------- 105 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS-------------- 105 (236)
T ss_dssp TCSEEEECT-TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE--------------
T ss_pred cceeEEECC-CccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC--------------
Confidence 456899999 8999999 44459999987632222111 1100012236788999999999995
Q ss_pred cccCCCceEEEEeCCCCe--------EEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEE
Q 016318 209 FSAEDTGRVLKYDPTTKQ--------TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKY 262 (391)
Q Consensus 209 ~~~~~~g~l~~~d~~~~~--------~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~ 262 (391)
+|.|+|.++.+.. .++-..+-..-.-|.++|+|. ||... +++++|.
T Consensus 106 -----dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 106 -----KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKA 159 (236)
T ss_dssp -----TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEE
T ss_pred -----CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEec
Confidence 4799999984421 111122223346789999998 88775 6677774
No 290
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.22 E-value=0.0099 Score=57.30 Aligned_cols=168 Identities=8% Similarity=-0.065 Sum_probs=91.8
Q ss_pred cceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcc--cCCCCCCccccccccCccCccceEEEecCCCc-EEE
Q 016318 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSE--LCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~-L~V 147 (391)
-..+++.+++..++++..++ +..++................ .+... ...+..+.+.++++++ +++ |+|
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~l~~sp-dg~~lav 109 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQG-------LLVPMKFPIHHLALSC-DNLTLSA 109 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCC-------EEECCSSCEEEEEECT-TSCEEEE
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcc-------ccccCCCcccEEEEcC-CCCEEEE
Confidence 45688888888788887776 555443211000000000000 00000 0011134578999998 555 444
Q ss_pred ---EECCCC-eEEEeCCCC-----ee-EEce--eccCCCcccCCcceeecCC-CCEEEEeCCCcccchhheeeecccCCC
Q 016318 148 ---ADAYFG-LMKVGPEGG-----LA-TSLA--TEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 148 ---~d~~~g-l~~~d~~~g-----~~-~~~~--~~~~~~~~~~~~~l~~d~~-G~ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
+....+ |..+|..++ +. +.+. ....+ ....+.++++.++ ++++++.+. +
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~las~s~-----------------D 171 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD-AGGMVIDMKWNPTVPSMVAVCLA-----------------D 171 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS-GGGSEEEEEECSSCTTEEEEEET-----------------T
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCC-CCCceEEEEECCCCCCEEEEEEC-----------------C
Confidence 222233 677776433 10 1110 11111 1235788899987 777776543 5
Q ss_pred ceEEEEeCCCCeEEEeccC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 215 GRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 215 g~l~~~d~~~~~~~~~~~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
|.|..||..+++....... -...+.++++|+|+.|+++ ...+.|..++..+
T Consensus 172 g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasg-s~dg~v~iwd~~~ 223 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVG-KQNGTVVQYLPTL 223 (434)
T ss_dssp SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEE-ETTSCEEEECTTC
T ss_pred CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEE-cCCCcEEEEccCC
Confidence 7899999887754322222 3467889999999977766 4567888887653
No 291
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.21 E-value=0.11 Score=46.47 Aligned_cols=99 Identities=6% Similarity=-0.061 Sum_probs=48.6
Q ss_pred CCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEE-----EeccCCCCcceEEEccCCCEEE-E
Q 016318 178 FTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTT-----VLLRNLQFPNGLSLSKDKSFFV-F 251 (391)
Q Consensus 178 ~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-----~~~~~~~~~ngia~~~d~~~l~-v 251 (391)
....++..++|+..++.+. +|.+..||..+++.. ...........+++.+++..+. +
T Consensus 152 ~~~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 214 (318)
T 4ggc_A 152 EVCGLRWAPDGRHLASGGN-----------------DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 214 (318)
T ss_dssp CEEEEEECTTSSEEEEEET-----------------TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEE
T ss_pred ceEEEEEcCCCCEEEEEec-----------------CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEE
Confidence 3456677778876666533 577888888765421 1111222345677777655443 3
Q ss_pred EeC-CCCeEEEEEeccccCccceeecccCCCCCceEeCCCCCEEEE
Q 016318 252 CEG-SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVA 296 (391)
Q Consensus 252 ~et-~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva 296 (391)
+.. ..+.|..++.... ..............+...+++...++
T Consensus 215 ~~~~~~~~i~lwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 215 GGGTSDRHIRIWNVCSG---ACLSAVDAHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp EECTTTCEEEEEETTTC---CEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred EecCCCCEEEEEecccc---cccccccceeeeeeeeecccccceEE
Confidence 333 2344555543321 11111111122334556666664443
No 292
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.014 Score=57.70 Aligned_cols=197 Identities=9% Similarity=-0.068 Sum_probs=111.0
Q ss_pred CcceEEEccC------CCeeEEEecCCEEEEEeCCcee----EEEeecCCCcccCCCCCCccccccccCccCccceEEEe
Q 016318 70 GPESMAFDPL------GRGPYTGVADGRILFWDGLKWT----DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFD 139 (391)
Q Consensus 70 gPe~i~~d~~------G~~ly~~~~~g~I~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d 139 (391)
...++++.|+ ++++.+++.||.|..|+...-. ...... . +........+...+++++
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~-------~------p~~~l~~h~~~v~sv~~s 275 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE-------K------PSLTLSLADSLITTFDFL 275 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC-------S------CSEEECCTTTCEEEEEES
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec-------C------ceEEEEcCCCCEEEEEec
Confidence 3457888875 5678889999999888765100 000000 0 000111112446688888
Q ss_pred cCCCcEEEEECCCCeEEEeCCCCeeE-EceeccCCCcccCCcce--eecCCC-CEEEEeCCCcccchhheeeecccCCCc
Q 016318 140 KKTGDLYIADAYFGLMKVGPEGGLAT-SLATEAEGVPLRFTNDL--DIDDEG-NVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 140 ~~~g~L~V~d~~~gl~~~d~~~g~~~-~~~~~~~~~~~~~~~~l--~~d~~G-~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
+ ++.|..+.....|..+|..++... ...... -...+++ +..++| ++.++.+. ++
T Consensus 276 ~-~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H----~~~V~sv~~~~s~~g~~~laS~S~-----------------D~ 333 (524)
T 2j04_B 276 S-PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVH----DSYILSVSTAYSDFEDTVVSTVAV-----------------DG 333 (524)
T ss_dssp S-SSEEEEEETTSEEEEEETTBCSSCSEEEECS----SSCEEEEEEECCTTSCCEEEEEET-----------------TS
T ss_pred C-CCeEEEEeCCCEEEEEECCCCCCceEEeecc----cccEEEEEEEcCCCCCeEEEEecc-----------------CC
Confidence 7 566666655555888898765321 111111 1245677 346677 77777643 57
Q ss_pred eEEEEeCCCCeEE-EeccCC--CCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCCceEeCCCCC
Q 016318 216 RVLKYDPTTKQTT-VLLRNL--QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE 292 (391)
Q Consensus 216 ~l~~~d~~~~~~~-~~~~~~--~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~ 292 (391)
.+..||..+++.. .+.... ...+.++++|+++. +++....+.|..+++.... ....+....+....++++++|.
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~--~~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAF--AVHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTT--CCEEEEECSSCEEEEECCSSCC
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcccc--cceeeecCCCceEEEEeCCCCC
Confidence 8888987665421 111111 12467999999985 4554556677777654321 1122332334456788899998
Q ss_pred EEEEEcCCCchh
Q 016318 293 FWVAIHCRRSLY 304 (391)
Q Consensus 293 lwva~~~~~~~~ 304 (391)
+.++......+.
T Consensus 411 ~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 411 MVLAGSADGSLI 422 (524)
T ss_dssp BCEEEETTTEEE
T ss_pred eEEEEECCCEEE
Confidence 766655554443
No 293
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.10 E-value=0.1 Score=49.61 Aligned_cols=148 Identities=16% Similarity=0.121 Sum_probs=84.8
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY 151 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~ 151 (391)
.++++ +++.+++++.||.|..|+........... ........+.++ ++.++.+...
T Consensus 177 ~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~l~~~--~~~l~s~s~d 232 (435)
T 1p22_A 177 LCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI--------------------HHCEAVLHLRFN--NGMMVTCSKD 232 (435)
T ss_dssp EEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC--------------------CCCSCEEEEECC--TTEEEEEETT
T ss_pred EEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc--------------------CCCCcEEEEEEc--CCEEEEeeCC
Confidence 34444 67889999999999999876222221111 112345567775 3566666655
Q ss_pred CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEec
Q 016318 152 FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 152 ~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 231 (391)
..|..+|..++..........+. ......++. +|+..++.+. +|.+..||..+++.....
T Consensus 233 g~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~s~~~-----------------dg~i~vwd~~~~~~~~~~ 292 (435)
T 1p22_A 233 RSIAVWDMASPTDITLRRVLVGH-RAAVNVVDF--DDKYIVSASG-----------------DRTIKVWNTSTCEFVRTL 292 (435)
T ss_dssp SCEEEEECSSSSCCEEEEEECCC-SSCEEEEEE--ETTEEEEEET-----------------TSEEEEEETTTCCEEEEE
T ss_pred CcEEEEeCCCCCCceeeeEecCC-CCcEEEEEe--CCCEEEEEeC-----------------CCeEEEEECCcCcEEEEE
Confidence 66888888765432211111111 123445555 5555555432 578999999887654433
Q ss_pred cC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 232 RN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 232 ~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
.. ......+++ +++.++.+ ...+.|..+++..
T Consensus 293 ~~~~~~v~~~~~--~~~~l~~g-~~dg~i~iwd~~~ 325 (435)
T 1p22_A 293 NGHKRGIACLQY--RDRLVVSG-SSDNTIRLWDIEC 325 (435)
T ss_dssp ECCSSCEEEEEE--ETTEEEEE-ETTSCEEEEETTT
T ss_pred cCCCCcEEEEEe--CCCEEEEE-eCCCeEEEEECCC
Confidence 32 233445555 56655554 5567888888653
No 294
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.09 E-value=0.21 Score=47.47 Aligned_cols=145 Identities=11% Similarity=0.002 Sum_probs=85.4
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY 151 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~ 151 (391)
.+++++ ++.++++..||.|..|+........... .......++.++ ++.++++...
T Consensus 163 ~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~--~~~l~s~s~d 218 (445)
T 2ovr_B 163 WSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY--------------------GHTSTVRCMHLH--EKRVVSGSRD 218 (445)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEEE--TTEEEEEETT
T ss_pred EEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC--------------------CCCCcEEEEEec--CCEEEEEeCC
Confidence 455554 5678999999999999876322222111 012334567776 3567777655
Q ss_pred CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEec
Q 016318 152 FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 152 ~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 231 (391)
..|..+|..+++......... .....++. +|+..++.+. +|.+..||..+++.....
T Consensus 219 g~i~~wd~~~~~~~~~~~~~~----~~v~~~~~--~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~~ 275 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMGHV----AAVRCVQY--DGRRVVSGAY-----------------DFMVKVWDPETETCLHTL 275 (445)
T ss_dssp SEEEEEESSSCCEEEEEECCS----SCEEEEEE--CSSCEEEEET-----------------TSCEEEEEGGGTEEEEEE
T ss_pred CEEEEEECCCCcEEEEEcCCc----ccEEEEEE--CCCEEEEEcC-----------------CCEEEEEECCCCcEeEEe
Confidence 568889988765433222111 23445555 5554444422 578889998877654433
Q ss_pred cC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEecc
Q 016318 232 RN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 232 ~~-~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g 266 (391)
.. ......+++ +++.++.+ ...+.|..+++..
T Consensus 276 ~~~~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~~ 308 (445)
T 2ovr_B 276 QGHTNRVYSLQF--DGIHVVSG-SLDTSIRVWDVET 308 (445)
T ss_dssp CCCSSCEEEEEE--CSSEEEEE-ETTSCEEEEETTT
T ss_pred cCCCCceEEEEE--CCCEEEEE-eCCCeEEEEECCC
Confidence 32 233445555 78866665 4567888888653
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.07 E-value=0.07 Score=49.11 Aligned_cols=143 Identities=13% Similarity=0.093 Sum_probs=79.3
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
.+|++.++++ +|+...+|.|++-... .|+..... ..+...++.+++ ++++|++.
T Consensus 125 ~~i~~~~~~~-~~~~~~~g~v~~S~DgG~tW~~~~~~----------------------~~~~~~~~~~~~-~~~~~~~g 180 (327)
T 2xbg_A 125 RLIKALGNGS-AEMITNVGAIYRTKDSGKNWQALVQE----------------------AIGVMRNLNRSP-SGEYVAVS 180 (327)
T ss_dssp EEEEEEETTE-EEEEETTCCEEEESSTTSSEEEEECS----------------------CCCCEEEEEECT-TSCEEEEE
T ss_pred EEEEEECCCC-EEEEeCCccEEEEcCCCCCCEEeecC----------------------CCcceEEEEEcC-CCcEEEEE
Confidence 4566655666 6666667777776432 56554211 012346778887 67888776
Q ss_pred CCCCeEEEeCC-CCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE-
Q 016318 150 AYFGLMKVGPE-GGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT- 227 (391)
Q Consensus 150 ~~~gl~~~d~~-~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~- 227 (391)
...++++-+-. +...+.+... ......+++++++|++|+.... |.+++.+.+.++.
T Consensus 181 ~~G~~~~S~d~gG~tW~~~~~~----~~~~~~~~~~~~~g~~~~~~~~------------------G~~~~s~~D~G~tW 238 (327)
T 2xbg_A 181 SRGSFYSTWEPGQTAWEPHNRT----TSRRLHNMGFTPDGRLWMIVNG------------------GKIAFSDPDNSENW 238 (327)
T ss_dssp TTSSEEEEECTTCSSCEEEECC----SSSCEEEEEECTTSCEEEEETT------------------TEEEEEETTEEEEE
T ss_pred CCCcEEEEeCCCCCceeECCCC----CCCccceeEECCCCCEEEEeCC------------------ceEEEecCCCCCee
Confidence 55567776543 3334443221 1124567888899999988742 5666654332332
Q ss_pred EEeccC-CC---CcceEEEccCCCEEEEEeCCCCeEEEE
Q 016318 228 TVLLRN-LQ---FPNGLSLSKDKSFFVFCEGSVGRLHKY 262 (391)
Q Consensus 228 ~~~~~~-~~---~~ngia~~~d~~~l~v~et~~~~I~~~ 262 (391)
+.+... +. ....+++.++++ +|++.. .+.|++-
T Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g~-~g~i~~S 275 (327)
T 2xbg_A 239 GELLSPLRRNSVGFLDLAYRTPNE-VWLAGG-AGALLCS 275 (327)
T ss_dssp CCCBCTTSSCCSCEEEEEESSSSC-EEEEES-TTCEEEE
T ss_pred EeccCCcccCCcceEEEEecCCCE-EEEEeC-CCeEEEe
Confidence 222211 11 134567777777 666533 4456543
No 296
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.99 E-value=0.046 Score=55.99 Aligned_cols=186 Identities=15% Similarity=0.094 Sum_probs=98.1
Q ss_pred cceEEEccCCCeeEEEecCCE----------------EEEEeCC--cee-EEEeecCCCcccCCCCCCccccccccCccC
Q 016318 71 PESMAFDPLGRGPYTGVADGR----------------ILFWDGL--KWT-DFAFTSNNRSELCNPKPIATSYLKNEHICG 131 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~~~~g~----------------I~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 131 (391)
..++++.+||+.++.+..++. |++++.. ... ..... ......
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~-------------------~~~~~~ 233 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE-------------------FPDEPK 233 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC-------------------CTTCTT
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEec-------------------cCCCCe
Confidence 457899999987877776544 7776654 110 01000 000012
Q ss_pred ccceEEEecCCCcEEEEEC-----CCCeEEEeCCC------C--eeEEceeccCCCcccCCcceeecCCC-CEEEEeCCC
Q 016318 132 RPLGLRFDKKTGDLYIADA-----YFGLMKVGPEG------G--LATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSST 197 (391)
Q Consensus 132 ~P~gi~~d~~~g~L~V~d~-----~~gl~~~d~~~------g--~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~ 197 (391)
...++.+++++..|+++.. ...|+.+|.++ + ..+.+...... ..-.++++| .+|+....
T Consensus 234 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~------~~~~~s~dg~~l~~~s~~- 306 (710)
T 2xdw_A 234 WMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG------EYDYVTNEGTVFTFKTNR- 306 (710)
T ss_dssp CEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS------CEEEEEEETTEEEEEECT-
T ss_pred EEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc------EEEEEeccCCEEEEEECC-
Confidence 3457888884444655543 23488888875 4 34444332211 112355665 57776532
Q ss_pred cccchhheeeecccCCCceEEEEeCCCCe---EEEeccCCC--CcceEEEccCCCEEEEEeCCC--CeEEEEEe-ccccC
Q 016318 198 NYQRRNFMQLVFSAEDTGRVLKYDPTTKQ---TTVLLRNLQ--FPNGLSLSKDKSFFVFCEGSV--GRLHKYWL-IGEKA 269 (391)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~~~~--~~ngia~~~d~~~l~v~et~~--~~I~~~~~-~g~~~ 269 (391)
..++++|+.+|.++++ .+.+..... ...++++++++. ++++...+ .+|+++++ .|.
T Consensus 307 -------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~~g~-- 370 (710)
T 2xdw_A 307 -------------HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLATGA-- 370 (710)
T ss_dssp -------------TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETTTCC--
T ss_pred -------------CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECCCCC--
Confidence 1235689999988764 344443322 355778875555 66654433 36788876 331
Q ss_pred ccceeecccCCCCCceEeCCCCC-EEEEEcC
Q 016318 270 GNLEAFAILPGYPDNVRTNEKGE-FWVAIHC 299 (391)
Q Consensus 270 g~~~~~~~~~g~p~~i~~d~~G~-lwva~~~ 299 (391)
..+.+..-.+...++..+++|. ++++..+
T Consensus 371 -~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss 400 (710)
T 2xdw_A 371 -LLKIFPLEVGSVVGYSGQKKDTEIFYQFTS 400 (710)
T ss_dssp -EEEEECCCSSEEEEEECCTTCSEEEEEEEC
T ss_pred -EEEecCCCCceEEEEecCCCCCEEEEEEeC
Confidence 1122211123334466677775 5555433
No 297
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.98 E-value=0.032 Score=51.05 Aligned_cols=115 Identities=11% Similarity=0.103 Sum_probs=72.5
Q ss_pred eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEecc
Q 016318 154 LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLR 232 (391)
Q Consensus 154 l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~ 232 (391)
|+.++.++++.+.+ .....+++.|||+ |+++... .......|+.++.++++.+.+..
T Consensus 45 l~~~d~~~~~~~~l---------~~~~~~~~SpDg~~la~~~~~-------------~~~~~~~l~~~~~~~g~~~~l~~ 102 (347)
T 2gop_A 45 IVIENLKNNARRFI---------ENATMPRISPDGKKIAFMRAN-------------EEKKVSEIWVADLETLSSKKILE 102 (347)
T ss_dssp EEEEETTTCCEEEE---------ESCEEEEECTTSSEEEEEEEE-------------TTTTEEEEEEEETTTTEEEEEEE
T ss_pred EEEEeCCCCceEEc---------ccCCCeEECCCCCEEEEEEec-------------cCCCcceEEEEECCCCceEEEEc
Confidence 66666777665544 1356678899995 5554321 00123469999998888776654
Q ss_pred CCCCcceEEEccCCCEEEEEeCC--------------------------CCeEEEEEeccccCccc-eeecccCCCCCce
Q 016318 233 NLQFPNGLSLSKDKSFFVFCEGS--------------------------VGRLHKYWLIGEKAGNL-EAFAILPGYPDNV 285 (391)
Q Consensus 233 ~~~~~ngia~~~d~~~l~v~et~--------------------------~~~I~~~~~~g~~~g~~-~~~~~~~g~p~~i 285 (391)
... ...++++||++.|+++... ..+|+++++.+. +. +.+.. + ....+
T Consensus 103 ~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~---~~~~~l~~-~-~~~~~ 176 (347)
T 2gop_A 103 AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE---EVIEEFEK-P-RFSSG 176 (347)
T ss_dssp ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT---EEEEEEEE-E-TTCEE
T ss_pred CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC---eEEeeecC-C-Ccccc
Confidence 333 7789999999988877422 256888887652 22 33332 3 45677
Q ss_pred EeCCCCCEEEEE
Q 016318 286 RTNEKGEFWVAI 297 (391)
Q Consensus 286 ~~d~~G~lwva~ 297 (391)
..+++| ++++.
T Consensus 177 ~~spdg-~~~~~ 187 (347)
T 2gop_A 177 IWHRDK-IVVNV 187 (347)
T ss_dssp EEETTE-EEEEE
T ss_pred cCCCCe-EEEEE
Confidence 888888 55443
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.95 E-value=0.32 Score=48.85 Aligned_cols=43 Identities=12% Similarity=0.137 Sum_probs=28.4
Q ss_pred ccceEEEEEC-CCCCEEEEEeCCCCCeeeceeEEEEECCEEEEecC
Q 016318 336 RLHAMAVKYS-PEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 380 (391)
Q Consensus 336 ~~~~~v~~~d-~~g~~~~~~~~~~g~~~~~is~~~~~~g~Lylgs~ 380 (391)
...+.+.++| .+|+.+..+....+..... .+.+.+|++|++..
T Consensus 491 t~dg~l~A~D~~tG~~lW~~~l~~g~~~~P--~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 491 TLDGYLKARDSDTGDLLWKFKIPSGAIGYP--MTYTHKGTQYVAIY 534 (599)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEeeCCCCcEecc--EEEEeCCEEEEEEE
Confidence 3456788888 4688888887665543322 23367899998743
No 299
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.92 E-value=0.0058 Score=60.32 Aligned_cols=123 Identities=12% Similarity=0.176 Sum_probs=78.2
Q ss_pred CcccCCcceeecC-CCCEEEEeCCCcccchhh-eee---ecccCCCceEEEEeCCCC-------eEEEec----------
Q 016318 174 VPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNF-MQL---VFSAEDTGRVLKYDPTTK-------QTTVLL---------- 231 (391)
Q Consensus 174 ~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~-~~~---~~~~~~~g~l~~~d~~~~-------~~~~~~---------- 231 (391)
.++..|.++++++ +|.+|++-++..-...+- -.+ .......|.|+++....+ +...+.
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 4566799999998 789999965432110000 000 011234688998875422 123321
Q ss_pred ------------cCCCCcceEEEccCCCEEEEEeCC------------CCeEEEEEeccccCccceeecccC--CCCCce
Q 016318 232 ------------RNLQFPNGLSLSKDKSFFVFCEGS------------VGRLHKYWLIGEKAGNLEAFAILP--GYPDNV 285 (391)
Q Consensus 232 ------------~~~~~~ngia~~~d~~~l~v~et~------------~~~I~~~~~~g~~~g~~~~~~~~~--g~p~~i 285 (391)
..+..|++|+++++|+ |||++.. ++.+++++ +..++...|...| ..|.|+
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~d---p~tGel~~fl~~P~~aEpnGi 536 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCAD---PATGEIRRFMVGPIGCEVTGI 536 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEEC---TTTCCEEEEEECCTTCEEEEE
T ss_pred ccccCccCccccCccCCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEe---CCCCeEEEEEeCCCCccccCC
Confidence 1256799999999998 9994332 34788885 3346667776544 357999
Q ss_pred EeCCCCC-EEEEEcCC
Q 016318 286 RTNEKGE-FWVAIHCR 300 (391)
Q Consensus 286 ~~d~~G~-lwva~~~~ 300 (391)
++++|++ |||+....
T Consensus 537 afSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 537 SFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EECTTSSEEEEEEEST
T ss_pred EECCCCCEEEEEEeCC
Confidence 9999998 88987654
No 300
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.87 E-value=0.088 Score=53.73 Aligned_cols=159 Identities=9% Similarity=-0.040 Sum_probs=85.9
Q ss_pred cceEEEccCCCeeEEE-ecC----CEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcE
Q 016318 71 PESMAFDPLGRGPYTG-VAD----GRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (391)
Q Consensus 71 Pe~i~~d~~G~~ly~~-~~~----g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L 145 (391)
-.+++++|||+.+... ..+ ..|+.++...-...... ... ...-.++++++++..|
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~------------------~~~--~~~~~~~~wspDg~~l 182 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD------------------VIE--GGKYATPKWTPDSKGF 182 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC------------------CBS--CCTTCCCEECTTSSEE
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc------------------ccC--cccccceEEecCCCEE
Confidence 3467899999965433 323 46777776521110000 000 0111467888843446
Q ss_pred EEEECCCC-------------eEEEeCCCCeeE--EceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeec
Q 016318 146 YIADAYFG-------------LMKVGPEGGLAT--SLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVF 209 (391)
Q Consensus 146 ~V~d~~~g-------------l~~~d~~~g~~~--~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~ 209 (391)
+.+..... |++++..+++.+ .+....+. .....++.+++||+ |.++....
T Consensus 183 ~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~--~~~~~~~~~SpDG~~l~~~~~~~------------ 248 (695)
T 2bkl_A 183 YYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD--PTTFLQSDLSRDGKYLFVYILRG------------ 248 (695)
T ss_dssp EEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC--TTCEEEEEECTTSCCEEEEEEET------------
T ss_pred EEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC--CEEEEEEEECCCCCEEEEEEeCC------------
Confidence 55554332 899998877532 22221111 12345778899996 44443210
Q ss_pred ccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeC---CCCeEEEEEeccc
Q 016318 210 SAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEG---SVGRLHKYWLIGE 267 (391)
Q Consensus 210 ~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et---~~~~I~~~~~~g~ 267 (391)
..+..|+.++..+++.+.+............ ++++ +|+... .+.+|+++++++.
T Consensus 249 --~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 249 --WSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp --TTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred --CCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 0234677788767777666544433333433 6787 776644 2578999987653
No 301
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.85 E-value=0.0019 Score=60.96 Aligned_cols=143 Identities=12% Similarity=0.060 Sum_probs=54.2
Q ss_pred eEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEECC-
Q 016318 73 SMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY- 151 (391)
Q Consensus 73 ~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~- 151 (391)
+.+++ ++.+|+++.+|.|+.+|...-+..-..... . ....| +.. ++.+|++...
T Consensus 4 sP~v~--~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~--~----------------~~s~p----~~~-~g~~~v~~s~d 58 (369)
T 2hz6_A 4 TVTLP--ETLLFVSTLDGSLHAVSKRTGSIKWTLKED--P----------------VLQVP----THV-EEPAFLPDPND 58 (369)
T ss_dssp ----C--TTEEEEEETTSEEEEEETTTCCEEEEEECC--C----------------SCCCC----------CCEEECTTT
T ss_pred CCeee--CCEEEEEcCCCEEEEEECCCCCEEEEecCC--C----------------ceecc----eEc-CCCEEEEeCCC
Confidence 44553 455999999999999997611111111000 0 01112 112 4667776444
Q ss_pred CCeEEEeCCCCeeE-EceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEe
Q 016318 152 FGLMKVGPEGGLAT-SLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVL 230 (391)
Q Consensus 152 ~gl~~~d~~~g~~~-~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~ 230 (391)
..|+.+|.++|+.. .+....... .....++..++.+|++.. ++.++.+|+++|+..--
T Consensus 59 g~l~a~d~~tG~~~w~~~~~~~~~---~~~sp~~~~~~~v~~g~~------------------dg~v~a~D~~tG~~~w~ 117 (369)
T 2hz6_A 59 GSLYTLGSKNNEGLTKLPFTIPEL---VQASPCRSSDGILYMGKK------------------QDIWYVIDLLTGEKQQT 117 (369)
T ss_dssp CCEEEC-----CCSEECSCCHHHH---HTTCSCC-----CCCCEE------------------EEEEEEECCC-------
T ss_pred CEEEEEECCCCceeeeeeccCccc---cccCceEecCCEEEEEeC------------------CCEEEEEECCCCcEEEE
Confidence 45999999777532 221110000 001112223566776542 37899999998876432
Q ss_pred ccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 016318 231 LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 265 (391)
Q Consensus 231 ~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~ 265 (391)
... ...+..+|+++.+|++. ..+.|+.++.+
T Consensus 118 ~~~---~~~~~~~p~~~~v~~~~-~dg~v~a~d~~ 148 (369)
T 2hz6_A 118 LSS---AFADSLSPSTSLLYLGR-TEYTITMYDTK 148 (369)
T ss_dssp ------------------EEEEE-EEEEEECCCSS
T ss_pred ecC---CCcccccccCCEEEEEe-cCCEEEEEECC
Confidence 211 11234556777687763 34577777754
No 302
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.053 Score=53.61 Aligned_cols=153 Identities=9% Similarity=-0.075 Sum_probs=82.5
Q ss_pred CccceEEEecC-----CCcEEEEECCC-CeEEEeCCCCeeE-----Ecee---ccCCCcccCCcceeecCCCCEEEEeCC
Q 016318 131 GRPLGLRFDKK-----TGDLYIADAYF-GLMKVGPEGGLAT-----SLAT---EAEGVPLRFTNDLDIDDEGNVYFTDSS 196 (391)
Q Consensus 131 g~P~gi~~d~~-----~g~L~V~d~~~-gl~~~d~~~g~~~-----~~~~---~~~~~~~~~~~~l~~d~~G~ly~td~~ 196 (391)
+....+++.++ ++.++++.... -|..+|..++... .+.. ...+. -..+..+++.+++.|..+.
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h-~~~v~sv~~s~~~~lasgs-- 284 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLA-DSLITTFDFLSPTTVVCGF-- 284 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCT-TTCEEEEEESSSSEEEEEE--
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcC-CCCEEEEEecCCCeEEEEe--
Confidence 55678888873 13555544444 4777777655311 0000 01110 1245667776655433332
Q ss_pred CcccchhheeeecccCCCceEEEEeCCCCeE--EEeccCCCCcceE--EEccCC-CEEEEEeCCCCeEEEEEeccccCcc
Q 016318 197 TNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT--TVLLRNLQFPNGL--SLSKDK-SFFVFCEGSVGRLHKYWLIGEKAGN 271 (391)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~--~~~~~~~~~~ngi--a~~~d~-~~l~v~et~~~~I~~~~~~g~~~g~ 271 (391)
.+|.|..||.++++. ..+...-...+.| ++++++ + ++++-+..+.|..+++...+.
T Consensus 285 ----------------~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~-~laS~S~D~tvklWD~~~~~~-- 345 (524)
T 2j04_B 285 ----------------KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDT-VVSTVAVDGYFYIFNPKDIAT-- 345 (524)
T ss_dssp ----------------TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCC-EEEEEETTSEEEEECGGGHHH--
T ss_pred ----------------CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCe-EEEEeccCCeEEEEECCCCCc--
Confidence 258899999876532 2222223345677 467787 6 556656667787777653211
Q ss_pred ceeec-ccC-CCCCceEeCCCCCEEEEEcCCCchhh
Q 016318 272 LEAFA-ILP-GYPDNVRTNEKGEFWVAIHCRRSLYS 305 (391)
Q Consensus 272 ~~~~~-~~~-g~p~~i~~d~~G~lwva~~~~~~~~~ 305 (391)
...+. ... +....++++++|..+++......+.+
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred ccccccccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 11222 122 12456889999988877666544433
No 303
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.78 E-value=0.11 Score=48.76 Aligned_cols=189 Identities=7% Similarity=-0.017 Sum_probs=92.8
Q ss_pred cceEEEcc--------CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC
Q 016318 71 PESMAFDP--------LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (391)
Q Consensus 71 Pe~i~~d~--------~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~ 141 (391)
-.++++.+ +|+++.+++.|+.|..||.. .-...... ........++|+++
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~---------------------~~~~~v~~v~~~p~ 197 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY---------------------PLSSPGISVQFRPS 197 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE---------------------ECSSCEEEEEEETT
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec---------------------CCCCCcEEEEECCC
Confidence 45677865 78888999999999999854 21111111 01244568899984
Q ss_pred CCcE-EEEECCCCeEEEeCCCCeeEEceeccCC---------------------CcccCCcceeec-CCCCEEEEeCCCc
Q 016318 142 TGDL-YIADAYFGLMKVGPEGGLATSLATEAEG---------------------VPLRFTNDLDID-DEGNVYFTDSSTN 198 (391)
Q Consensus 142 ~g~L-~V~d~~~gl~~~d~~~g~~~~~~~~~~~---------------------~~~~~~~~l~~d-~~G~ly~td~~~~ 198 (391)
+.++ ..+....-|..+|..+++...-...... ........++.. ++|+..++.+.
T Consensus 198 ~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~-- 275 (393)
T 4gq1_A 198 NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCK-- 275 (393)
T ss_dssp EEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECT--
T ss_pred CCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeC--
Confidence 4344 4444334478888877643221100000 001123334443 46665555432
Q ss_pred ccchhheeeecccCCCceEEEEeCCCCeEEEecc-------------------CCCCcceEEEcc-CCCEEEEEeCCCCe
Q 016318 199 YQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLR-------------------NLQFPNGLSLSK-DKSFFVFCEGSVGR 258 (391)
Q Consensus 199 ~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-------------------~~~~~ngia~~~-d~~~l~v~et~~~~ 258 (391)
++.+..||..+++...... ......+..+++ .++.+.++....+.
T Consensus 276 ---------------d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~ 340 (393)
T 4gq1_A 276 ---------------SGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGL 340 (393)
T ss_dssp ---------------TSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTE
T ss_pred ---------------CCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCE
Confidence 4566667765443211110 011122333333 34445555566678
Q ss_pred EEEEEeccccCccceeecccCCCCCceEeCCCCCEEEEEcC
Q 016318 259 LHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHC 299 (391)
Q Consensus 259 I~~~~~~g~~~g~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 299 (391)
|+.++..... ....+.........++++++|+++++...
T Consensus 341 V~lwd~~~~~--~~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 341 IQLINTYEKD--SNSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp EEEEETTCTT--CCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred EEEEECCCCc--EEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 8888765321 11222222233467899999997765443
No 304
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.77 E-value=0.41 Score=48.77 Aligned_cols=139 Identities=6% Similarity=0.002 Sum_probs=70.9
Q ss_pred eEEEecCCCcEEEEECCC-------------CeEEEeCCCCee--EEceeccCCCcccCCcceeecCCCC-EEEEeCCCc
Q 016318 135 GLRFDKKTGDLYIADAYF-------------GLMKVGPEGGLA--TSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTN 198 (391)
Q Consensus 135 gi~~d~~~g~L~V~d~~~-------------gl~~~d~~~g~~--~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~ 198 (391)
+++++ ++..|+++.... .|++.+..++.. +.+... ......+..++.+++||+ |+++.++
T Consensus 179 ~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~-- 254 (693)
T 3iuj_A 179 GISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTEDDRFLLISAAN-- 254 (693)
T ss_dssp CCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECTTSCEEEEEEES--
T ss_pred cEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcCCCCEEEEEEcc--
Confidence 34566 466676665432 277777665532 222111 110012234677889996 4454422
Q ss_pred ccchhheeeecccCCCceEEEEeCCCC--eEEEeccCCCCcceEEEccCCCEEEEEeCC---CCeEEEEEeccccCccce
Q 016318 199 YQRRNFMQLVFSAEDTGRVLKYDPTTK--QTTVLLRNLQFPNGLSLSKDKSFFVFCEGS---VGRLHKYWLIGEKAGNLE 273 (391)
Q Consensus 199 ~~~~~~~~~~~~~~~~g~l~~~d~~~~--~~~~~~~~~~~~ngia~~~d~~~l~v~et~---~~~I~~~~~~g~~~g~~~ 273 (391)
......++.+|.+++ +.+.+......-... ++++++.+|+.... +.+|+++++++....+.+
T Consensus 255 ------------~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~ 321 (693)
T 3iuj_A 255 ------------STSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWR 321 (693)
T ss_dssp ------------SSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred ------------CCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccE
Confidence 111347888887665 455554433222222 56777777776433 368999998764332233
Q ss_pred eecccCCCCCceEeCCCCC
Q 016318 274 AFAILPGYPDNVRTNEKGE 292 (391)
Q Consensus 274 ~~~~~~g~p~~i~~d~~G~ 292 (391)
.+.. ...+.+.++.+|+
T Consensus 322 ~l~~--~~~~~~~~s~~g~ 338 (693)
T 3iuj_A 322 DLIP--ERQQVLTVHSGSG 338 (693)
T ss_dssp EEEC--CCSSCEEEEEETT
T ss_pred EEec--CCCCEEEEEEECC
Confidence 3332 2122234455555
No 305
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.76 E-value=0.23 Score=50.62 Aligned_cols=83 Identities=19% Similarity=0.188 Sum_probs=49.7
Q ss_pred CceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCC--CCCceEeCCCC
Q 016318 214 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG--YPDNVRTNEKG 291 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g--~p~~i~~d~~G 291 (391)
.|.|..+|+.+++..--.......++..+..++..+|++ +..+.++.++.+. |+...-..++. .-.-+....+|
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~t---G~~lw~~~~~~~~~~~p~~y~~~G 531 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAAT---GEKLWEAPTGTGVVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CCEEEEEECSSCCCSCCEEEEETT
T ss_pred ccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCC---CceeeeeeCCCCcccCCEEEEeCC
Confidence 478999999999864332222234566677777778877 6778999998653 22111112222 11124445788
Q ss_pred CEEEEEcCC
Q 016318 292 EFWVAIHCR 300 (391)
Q Consensus 292 ~lwva~~~~ 300 (391)
+.|++...+
T Consensus 532 ~~~v~~~~G 540 (677)
T 1kb0_A 532 RQYVSVAVG 540 (677)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 888876544
No 306
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.66 E-value=0.2 Score=51.56 Aligned_cols=116 Identities=15% Similarity=0.119 Sum_probs=65.2
Q ss_pred eEEEecCCCcEEEEECCC--------------CeEEEeCCCCee--EEceeccCCCcccCCcceeecCCCC-EEEEeCCC
Q 016318 135 GLRFDKKTGDLYIADAYF--------------GLMKVGPEGGLA--TSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSST 197 (391)
Q Consensus 135 gi~~d~~~g~L~V~d~~~--------------gl~~~d~~~g~~--~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~ 197 (391)
+++++++ ..|+++.... .|++.+..++.. +.+....+. ..+..++.+++||+ |.++....
T Consensus 213 ~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~--~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 213 GLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL--PKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC--TTCEEEEEECTTSCEEEEEEECT
T ss_pred cEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC--CeEEEEEEECCCCCEEEEEEEcc
Confidence 4567774 6666664332 277788766642 122211111 11345778899996 54443210
Q ss_pred cccchhheeeecccCCCceEEEEeCCCC--e-EEEeccCCCCcceEEEccCCCEEEEEeCC---CCeEEEEEeccc
Q 016318 198 NYQRRNFMQLVFSAEDTGRVLKYDPTTK--Q-TTVLLRNLQFPNGLSLSKDKSFFVFCEGS---VGRLHKYWLIGE 267 (391)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~l~~~d~~~~--~-~~~~~~~~~~~ngia~~~d~~~l~v~et~---~~~I~~~~~~g~ 267 (391)
...+..|+.+|.+++ + .+.+.......... +++|++.+++.... +.+|+++++++.
T Consensus 290 -------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 290 -------------TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp -------------TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred -------------CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 012357888888776 5 55555433222233 45888888877432 457999987653
No 307
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.53 E-value=0.34 Score=49.32 Aligned_cols=180 Identities=12% Similarity=0.036 Sum_probs=96.1
Q ss_pred ceEEEccCCCeeEEEecCCE-------------EEEEeCC--ce--eEEEeecCCCcccCCCCCCccccccccCccCccc
Q 016318 72 ESMAFDPLGRGPYTGVADGR-------------ILFWDGL--KW--TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPL 134 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~-------------I~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~ 134 (391)
.++++.+||+.++.+..+.. |++++.. .. ..+... ......-.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~--------------------~~~~~~~~ 230 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER--------------------TGDPTTFL 230 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC--------------------CCCTTCEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec--------------------CCCCEEEE
Confidence 57899999997777766543 8887654 11 111100 00012335
Q ss_pred eEEEecCCCcEEEEECCC----CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecc
Q 016318 135 GLRFDKKTGDLYIADAYF----GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFS 210 (391)
Q Consensus 135 gi~~d~~~g~L~V~d~~~----gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~ 210 (391)
++.+++++..|.++.... .|+.++..++..+.+...... ...... ++|.+|+....
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~-----~~~~~~-~~g~l~~~s~~-------------- 290 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA-----KYEVHA-WKDRFYVLTDE-------------- 290 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC-----CEEEEE-ETTEEEEEECT--------------
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc-----eEEEEe-cCCcEEEEECC--------------
Confidence 778888444465544333 488888777766666543221 122222 45557776531
Q ss_pred cCCCceEEEEeCCCCe---EEEeccC--CCCcceEEEccCCCEEEEEeCCC--CeEEEEEeccccCccceeecccC--CC
Q 016318 211 AEDTGRVLKYDPTTKQ---TTVLLRN--LQFPNGLSLSKDKSFFVFCEGSV--GRLHKYWLIGEKAGNLEAFAILP--GY 281 (391)
Q Consensus 211 ~~~~g~l~~~d~~~~~---~~~~~~~--~~~~ngia~~~d~~~l~v~et~~--~~I~~~~~~g~~~g~~~~~~~~~--g~ 281 (391)
..++++|+.+|.++++ .+.+... -....+++++ ++. ++++...+ .+|+.++++|. ..+.+ .++ +.
T Consensus 291 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~~~g~---~~~~l-~~~~~~~ 364 (695)
T 2bkl_A 291 GAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGH-LSLEYLKDATSEVRVATLKGK---PVRTV-QLPGVGA 364 (695)
T ss_dssp TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC---EEEEC-CCSSSSE
T ss_pred CCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEeCCCC---eeEEe-cCCCCeE
Confidence 1245789999987765 2444322 2234567776 444 66664433 46777765542 11111 122 23
Q ss_pred CCceEeCCCCC-EEEEE
Q 016318 282 PDNVRTNEKGE-FWVAI 297 (391)
Q Consensus 282 p~~i~~d~~G~-lwva~ 297 (391)
..++..+++|. ++++.
T Consensus 365 v~~~~~s~d~~~l~~~~ 381 (695)
T 2bkl_A 365 ASNLMGLEDLDDAYYVF 381 (695)
T ss_dssp ECCCBSCTTCSEEEEEE
T ss_pred EEEeecCCCCCEEEEEE
Confidence 34456667775 55443
No 308
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.49 E-value=0.48 Score=47.32 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=28.5
Q ss_pred ccceEEEEECC-CCCEEEEEeCCCCCeeeceeEEEEECCEEEEecC
Q 016318 336 RLHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 380 (391)
Q Consensus 336 ~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~is~~~~~~g~Lylgs~ 380 (391)
...+.+.++|. +|+++..+..+.+..... .+.+.+|++|++..
T Consensus 504 ~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P--~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 504 TGDGYFKAFDAKSGKELWKFQTGSGIVSPP--ITWEQDGEQYLGVT 547 (582)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEE
T ss_pred CCCCcEEEEECCCCCEEEEecCCCCcccCc--eEEEECCEEEEEEE
Confidence 34567888884 789888887765543222 22357899998843
No 309
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.48 E-value=0.03 Score=55.90 Aligned_cols=124 Identities=22% Similarity=0.384 Sum_probs=75.3
Q ss_pred cccccCcceEEEcc-CCCeeEEEec----------------------CCEEEEEeCC---------ceeEEEeecCCCcc
Q 016318 65 LNQIQGPESMAFDP-LGRGPYTGVA----------------------DGRILFWDGL---------KWTDFAFTSNNRSE 112 (391)
Q Consensus 65 ~~~~~gPe~i~~d~-~G~~ly~~~~----------------------~g~I~~~~~~---------~~~~~~~~~~~~~~ 112 (391)
...+..||++.+++ +|. +|++.. .|.|+++.++ .|..+.........
T Consensus 380 AT~f~RpEgi~~~p~~g~-vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~ 458 (592)
T 3zwu_A 380 ATRMDRPEWIVVSPKDGQ-VYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVH 458 (592)
T ss_dssp CCCEECEEEEEECTTTCC-EEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTS
T ss_pred eEEEeccceeEEcCCCCE-EEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccc
Confidence 45688999999996 566 665532 3789999654 23344322211000
Q ss_pred cCCCCCCccccccccCccCccceEEEecCCCcEEEEECC-------------CCeEEEeCCCCeeEEceeccCCCcccCC
Q 016318 113 LCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY-------------FGLMKVGPEGGLATSLATEAEGVPLRFT 179 (391)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~~-------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~ 179 (391)
.-... ..............|-+|+||+ .|+|||+.-. +.++..++.+++++.+.....+ .-.
T Consensus 459 ~~~~~-~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---aE~ 533 (592)
T 3zwu_A 459 AGTPK-GGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---CEV 533 (592)
T ss_dssp TTSGG-GCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT---CEE
T ss_pred ccccc-ccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC---ccC
Confidence 00000 0000001122356799999999 8999998643 2378889999999888754333 356
Q ss_pred cceeecCCCC-EEEEe
Q 016318 180 NDLDIDDEGN-VYFTD 194 (391)
Q Consensus 180 ~~l~~d~~G~-ly~td 194 (391)
.++++++||+ ||+.-
T Consensus 534 TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 534 TGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred cCeeECCCCCEEEEEE
Confidence 7889999984 66653
No 310
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.35 E-value=0.44 Score=44.22 Aligned_cols=151 Identities=16% Similarity=0.143 Sum_probs=78.9
Q ss_pred EEEcc---CCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEEC
Q 016318 74 MAFDP---LGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (391)
Q Consensus 74 i~~d~---~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d~ 150 (391)
+++.+ +|..+.+++.|+.|..||.+.-+.+....... ........++|++ ++.+.++..
T Consensus 184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~-----------------~~v~~v~~vafSp-dG~~lvs~s 245 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD-----------------SYQASVCHKAYSE-MGLLFIVLS 245 (356)
T ss_dssp EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC--------------------CCCEEEEEEE-TTEEEEEEC
T ss_pred EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC-----------------cceeeeEEEEECC-CCCEEEEec
Confidence 44555 67877888999999999987222221111000 0011234567888 666654321
Q ss_pred ------------C-CCeEEEeCCCCeeEEcee-c-cCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 151 ------------Y-FGLMKVGPEGGLATSLAT-E-AEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 151 ------------~-~gl~~~d~~~g~~~~~~~-~-~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
. .-+..+|+.+++...... . .++.... -+..+.+|.+.++.+ .++
T Consensus 246 ~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~---~lsg~~sg~~lASgS-----------------~Dg 305 (356)
T 2w18_A 246 HPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR---FLEGDVKDHCAAAIL-----------------TSG 305 (356)
T ss_dssp ------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC---EEEEEEETTEEEEEE-----------------TTS
T ss_pred cCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce---eEccccCCCEEEEEc-----------------CCC
Confidence 1 125556777775432110 0 1111100 011122233434432 357
Q ss_pred eEEEEeCCCCeEEEeccC-CCCcc-eEEEccCCCEEEEEeCCCCeEEEEE
Q 016318 216 RVLKYDPTTKQTTVLLRN-LQFPN-GLSLSKDKSFFVFCEGSVGRLHKYW 263 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~-~~~~n-gia~~~d~~~l~v~et~~~~I~~~~ 263 (391)
.|..+|..+++......+ ..... .++++|||++|+ +-...+.|+.++
T Consensus 306 TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La-SGS~D~TIklWd 354 (356)
T 2w18_A 306 TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL-AGQKDGNIFVYH 354 (356)
T ss_dssp CEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE-EECTTSCEEEEE
T ss_pred cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE-EEECCCcEEEec
Confidence 899999999986554433 23344 589999999554 446666776665
No 311
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.33 E-value=0.24 Score=50.61 Aligned_cols=43 Identities=14% Similarity=0.260 Sum_probs=28.3
Q ss_pred ccceEEEEECC-CCCEEEEEeCCCCCeeeceeEEEEECCEEEEecC
Q 016318 336 RLHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 380 (391)
Q Consensus 336 ~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~is~~~~~~g~Lylgs~ 380 (391)
...+.+.++|. +|+.+..+....+.....+ ..+.+|+.|++..
T Consensus 493 t~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~--ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 493 SADGRVIAYAADTGEKLWEQPAASGVMAAPV--TYSVDGEQYVTFM 536 (689)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEE
T ss_pred CCCCcEEEEECCCCccceeeeCCCCcccCce--EEEECCEEEEEEE
Confidence 44567888884 6888888876655432222 2267899998743
No 312
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.33 E-value=0.69 Score=46.05 Aligned_cols=84 Identities=14% Similarity=0.042 Sum_probs=46.2
Q ss_pred CCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCC--ceEeCCC
Q 016318 213 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPD--NVRTNEK 290 (391)
Q Consensus 213 ~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~--~i~~d~~ 290 (391)
..|.|+.+|+.+++..--........+..+...+..+|++ +..+.|+.++.+. |+..--..++.... -+....+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g-~~dg~l~a~D~~t---G~~lw~~~~~~~~~~~p~~~~~~ 517 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYA-TLDGYLKALDNKD---GKELWNFKMPSGGIGSPMTYSFK 517 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEE-CTTSEEEEEETTT---CCEEEEEECSSCCCSCCEEEEET
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEE-cCCCeEEEEECCC---CCEEEEEeCCCCcEeeeEEEEEC
Confidence 4589999999998764322211222333333345558876 5678899998543 22211112222111 1333468
Q ss_pred CCEEEEEcCC
Q 016318 291 GEFWVAIHCR 300 (391)
Q Consensus 291 G~lwva~~~~ 300 (391)
|++||+...+
T Consensus 518 G~~yv~~~~G 527 (571)
T 2ad6_A 518 GKQYIGSMYG 527 (571)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEECC
Confidence 8999987654
No 313
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.20 E-value=0.28 Score=49.86 Aligned_cols=43 Identities=21% Similarity=0.308 Sum_probs=25.8
Q ss_pred ccceEEEEECC-CCCEEEEEeCCCCCeeeceeEEEEECCEEEEecC
Q 016318 336 RLHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 380 (391)
Q Consensus 336 ~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~is~~~~~~g~Lylgs~ 380 (391)
...+.+.++|. +|+++..+....+.....+ ..+.+|++|++..
T Consensus 476 ~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~--~~~~~G~~yva~~ 519 (668)
T 1kv9_A 476 TAAGQMHAYSADKGEALWQFEAQSGIVAAPM--TFELAGRQYVAIM 519 (668)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEE
T ss_pred CCcccchhhhhhcChhheEecCCCCcccCce--EEEECCEEEEEEE
Confidence 34466777774 5888877766544322222 2267889888643
No 314
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.17 E-value=0.61 Score=47.52 Aligned_cols=111 Identities=14% Similarity=0.162 Sum_probs=63.5
Q ss_pred ceEEEecCCCcEEEEECC----CCeEEEeCCCC--eeEEceeccCCCcccCCcceeecC-CCCEEEEeCCCcccchhhee
Q 016318 134 LGLRFDKKTGDLYIADAY----FGLMKVGPEGG--LATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 134 ~gi~~d~~~g~L~V~d~~----~gl~~~d~~~g--~~~~~~~~~~~~~~~~~~~l~~d~-~G~ly~td~~~~~~~~~~~~ 206 (391)
.++.+++++..|++.... ..|+.+|.+++ ..+.+....+. .... +++ .+.+||.+..
T Consensus 237 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~-----~~~~-~~~~g~~l~~~t~~---------- 300 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA-----DVSL-VDNKGSTLYLLTNR---------- 300 (693)
T ss_dssp EEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS-----CEEE-EEEETTEEEEEECT----------
T ss_pred EEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc-----eEEE-EeccCCEEEEEECC----------
Confidence 467788843345554321 24888887665 44554332211 1111 344 4468877632
Q ss_pred eecccCCCceEEEEeCCCCeE---EEeccCCCCcceEEEccCCCEEEEEeCCCC--eEEEEEecc
Q 016318 207 LVFSAEDTGRVLKYDPTTKQT---TVLLRNLQFPNGLSLSKDKSFFVFCEGSVG--RLHKYWLIG 266 (391)
Q Consensus 207 ~~~~~~~~g~l~~~d~~~~~~---~~~~~~~~~~ngia~~~d~~~l~v~et~~~--~I~~~~~~g 266 (391)
..++++|+.+|.++++. +.+...-... +.++++++.|+++...+. +|+.++++|
T Consensus 301 ----~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 301 ----DAPNRRLVTVDAANPGPAHWRDLIPERQQV--LTVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp ----TCTTCEEEEEETTSCCGGGCEEEECCCSSC--EEEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred ----CCCCCEEEEEeCCCCCccccEEEecCCCCE--EEEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 12357899999887653 4444332222 277888988877755443 688887665
No 315
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.11 E-value=0.38 Score=49.41 Aligned_cols=125 Identities=11% Similarity=0.076 Sum_probs=68.7
Q ss_pred eEEEeCC---CCeeEEceeccC---CCcccCCcceeecCCCCE-EEEeCCCcccchhheeeecccCCCceEEEEeCCCCe
Q 016318 154 LMKVGPE---GGLATSLATEAE---GVPLRFTNDLDIDDEGNV-YFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 154 l~~~d~~---~g~~~~~~~~~~---~~~~~~~~~l~~d~~G~l-y~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 226 (391)
|++.+.. ++..+.+.+... +. .....++++.+||+. .++.+. .+.....|+.+|.++++
T Consensus 135 l~~~~~~~~~~~~~~~lld~~~l~~~~-~~~~~~~~~SPDG~~la~~~~~-------------~G~e~~~i~v~dl~tg~ 200 (741)
T 1yr2_A 135 LLVRPADAPVGTKGRVLLDPNTWAKDG-ATALDAWAASDDGRLLAYSVQD-------------GGSDWRTVKFVGVADGK 200 (741)
T ss_dssp EEEEETTSCTTCCCEEEECGGGCC-----EEEEEEEECTTSSEEEEEEEE-------------TTCSEEEEEEEETTTCC
T ss_pred EEEEcCCccCCCCCEEEECHHHhccCC-CEEEEeEEECCCCCEEEEEEcC-------------CCCceEEEEEEECCCCC
Confidence 6888776 666565533211 11 123456788999963 333211 01112468999999988
Q ss_pred EEEeccCCCCcceEEEccCCCEEEEEeCC-------------CCeEEEEEeccccCccceeecccCC---CCCceEeCCC
Q 016318 227 TTVLLRNLQFPNGLSLSKDKSFFVFCEGS-------------VGRLHKYWLIGEKAGNLEAFAILPG---YPDNVRTNEK 290 (391)
Q Consensus 227 ~~~~~~~~~~~ngia~~~d~~~l~v~et~-------------~~~I~~~~~~g~~~g~~~~~~~~~g---~p~~i~~d~~ 290 (391)
.......-....+++++|| +.|+++... ..+|+++++.++......++. .+. ...++.++++
T Consensus 201 ~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~-~~~~~~~~~~~~~SpD 278 (741)
T 1yr2_A 201 PLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA-TPELPKRGHGASVSSD 278 (741)
T ss_dssp EEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC-CTTCTTCEEEEEECTT
T ss_pred CCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec-cCCCCeEEEEEEECCC
Confidence 6543111111247899999 878877543 235888887543221122332 222 2236778999
Q ss_pred CCEE
Q 016318 291 GEFW 294 (391)
Q Consensus 291 G~lw 294 (391)
|+..
T Consensus 279 G~~l 282 (741)
T 1yr2_A 279 GRWV 282 (741)
T ss_dssp SCEE
T ss_pred CCEE
Confidence 9733
No 316
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.90 E-value=0.53 Score=47.85 Aligned_cols=82 Identities=20% Similarity=0.258 Sum_probs=47.4
Q ss_pred CceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCC--CCCceEeCCC
Q 016318 214 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPG--YPDNVRTNEK 290 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g--~p~~i~~d~~ 290 (391)
.|.|..+|+.+|+..--........+..+...+..+|++ +..+.++.++.+. |+. .+. .++. ...-+....+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~t---G~~-l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADK---GEA-LWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CCE-EEEEECSSCCCSCCEEEEET
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhc---Chh-heEecCCCCcccCceEEEEC
Confidence 388999999999864322222233444555567768777 6678899998542 221 111 1221 1112443467
Q ss_pred CCEEEEEcCC
Q 016318 291 GEFWVAIHCR 300 (391)
Q Consensus 291 G~lwva~~~~ 300 (391)
|++|++...+
T Consensus 512 G~~yva~~~G 521 (668)
T 1kv9_A 512 GRQYVAIMAG 521 (668)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 8889886653
No 317
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.84 E-value=1.6 Score=43.02 Aligned_cols=136 Identities=15% Similarity=0.087 Sum_probs=79.2
Q ss_pred eEEEEeCCC----C-eEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccc------cC--ccceeeccc-CC-
Q 016318 216 RVLKYDPTT----K-QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGE------KA--GNLEAFAIL-PG- 280 (391)
Q Consensus 216 ~l~~~d~~~----~-~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~------~~--g~~~~~~~~-~g- 280 (391)
++-.+|... + ....+......|.|+-++|||++++++.-....+..++.+-- +. -+..+.+.. .|
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 455666654 1 233344455689999999999999999888899999987621 11 011112221 13
Q ss_pred CCCceEeCCCCCEEEEEcCCCchhhhhh----hcCcc--ceeeeeecCccceeeeEEeecCccceEEEEECCCCCEEEEE
Q 016318 281 YPDNVRTNEKGEFWVAIHCRRSLYSHLM----ALYPK--IRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVL 354 (391)
Q Consensus 281 ~p~~i~~d~~G~lwva~~~~~~~~~~~l----~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~ 354 (391)
.|-..++|++|+.|.++.-...+..|-+ ..|.. ...++.++++--..-......+.. .+++|+.+.++
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get------~~~dGk~lv~l 452 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCET------NEADGKWLVAL 452 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTS------TTCCSCEEEEE
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCcc------CCCCccEEEEe
Confidence 4778899999999999876655543322 22211 234555665543322211111111 24678888777
Q ss_pred eCC
Q 016318 355 EDS 357 (391)
Q Consensus 355 ~~~ 357 (391)
+..
T Consensus 453 nK~ 455 (638)
T 3sbq_A 453 SKF 455 (638)
T ss_dssp ESC
T ss_pred ccc
Confidence 653
No 318
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.84 E-value=1.1 Score=45.60 Aligned_cols=82 Identities=20% Similarity=0.284 Sum_probs=48.5
Q ss_pred CceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCC--CCCceEeCCC
Q 016318 214 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPG--YPDNVRTNEK 290 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g--~p~~i~~d~~ 290 (391)
.|.|..+|++||+..--.......++-.+...+..++++ +..+.|+.++.+. |+ +.+. .++. ...-+....+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~t---G~-~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADT---GE-KLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CC-EEEEEECSSCCCSCCEEEEET
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCC---Cc-cceeeeCCCCcccCceEEEEC
Confidence 378999999999864332211122333555566767766 6678999998653 32 2221 2331 1122555678
Q ss_pred CCEEEEEcCC
Q 016318 291 GEFWVAIHCR 300 (391)
Q Consensus 291 G~lwva~~~~ 300 (391)
|+.||+...+
T Consensus 529 G~qyv~~~~G 538 (689)
T 1yiq_A 529 GEQYVTFMAG 538 (689)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999886643
No 319
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.76 E-value=1.8 Score=43.60 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=37.0
Q ss_pred ceEEEecCCCcEEEEECCC--CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeC
Q 016318 134 LGLRFDKKTGDLYIADAYF--GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDS 195 (391)
Q Consensus 134 ~gi~~d~~~g~L~V~d~~~--gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~ 195 (391)
.+.++.. +++|||.-... .+.++|+.+++.+.+..... .+.-...++-++|+||+...
T Consensus 246 ~~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~---~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 246 PGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQV---ARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp CEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSS---CCSSCEEEECTTSCEEEECC
T ss_pred ccccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCc---cccccceEEecCCeEEEEeC
Confidence 3566665 78999975432 49999999888776642111 12223445556888888753
No 320
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.57 E-value=2.1 Score=42.57 Aligned_cols=83 Identities=11% Similarity=0.074 Sum_probs=46.1
Q ss_pred CCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCCCC--ceEeCC
Q 016318 213 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPD--NVRTNE 289 (391)
Q Consensus 213 ~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~p~--~i~~d~ 289 (391)
..|.|..+|+.+|+..--.......++-.+.-.+..+|++ +..+.++.++.+. |+ +.+. .+++... -+....
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-~~dg~l~A~D~~t---G~-~lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTG-TGDGYFKAFDAKS---GK-ELWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEE-CTTSEEEEEETTT---CC-EEEEEECSSCCCSCCEEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEE-CCCCcEEEEECCC---CC-EEEEecCCCCcccCceEEEE
Confidence 4688999999999764222111112222222245557776 5677899888542 22 2221 2332111 255557
Q ss_pred CCCEEEEEcCC
Q 016318 290 KGEFWVAIHCR 300 (391)
Q Consensus 290 ~G~lwva~~~~ 300 (391)
+|+.||+...+
T Consensus 539 ~G~qYv~~~~G 549 (582)
T 1flg_A 539 DGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEcc
Confidence 89999987654
No 321
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.92 E-value=2.4 Score=39.44 Aligned_cols=149 Identities=6% Similarity=-0.130 Sum_probs=78.2
Q ss_pred cCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec-------CCCcEEEE
Q 016318 78 PLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK-------KTGDLYIA 148 (391)
Q Consensus 78 ~~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~-------~~g~L~V~ 148 (391)
++++.+.++..|+.|..|+.. ......... ......+....++|.+ .++++++.
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~-----------------~~~gH~~~v~~v~~~p~~~~~~~~d~~~las 161 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLG-----------------GKSGHHNFVNDIDIADVYSADNRLAEQVIAS 161 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEEC-----------------TTTSCSSCEEEEEEEEEECTTCSEEEEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeec-----------------ccCCCCCceEEEEEccccccccCCCCCEEEE
Confidence 345557778888888887654 111111110 1111235567888864 13556665
Q ss_pred ECCCC-eEEEeCCCCee-EEceeccCCCcccCCcceeecCCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCC
Q 016318 149 DAYFG-LMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 149 d~~~g-l~~~d~~~g~~-~~~~~~~~~~~~~~~~~l~~d~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
....+ |...|..++.. ..+... . .....+++.|++. +.++.+. ++.+..||..++
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~~~~~~-~----~~v~~v~~~p~~~~~l~~~~~-----------------d~~v~~wd~~t~ 219 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPILAGYPL-S----SPGISVQFRPSNPNQLIVGER-----------------NGNIRIFDWTLN 219 (393)
T ss_dssp EETTSEEEEEEEETTEEEEEEEEC-S----SCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCC
T ss_pred EECCCeEEEEECCCCceeeeecCC-C----CCcEEEEECCCCCceEEecCC-----------------CCEEEEEECCCC
Confidence 44444 77777655432 222211 1 2356788888774 4444432 467788887766
Q ss_pred eEEEecc--------------------------CCCCcceEEEc-cCCCEEEEEeCCCCeEEEEEecc
Q 016318 226 QTTVLLR--------------------------NLQFPNGLSLS-KDKSFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 226 ~~~~~~~--------------------------~~~~~ngia~~-~d~~~l~v~et~~~~I~~~~~~g 266 (391)
+...... .......++++ +|++.++ +-...+.+..+++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~-s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 220 LSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGIL-AMCKSGAWLRWNLFA 286 (393)
T ss_dssp C----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEE-EECTTSEEEEEEC--
T ss_pred cccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEE-EEeCCCCEEEEECcc
Confidence 5322110 01123456665 7888554 446677888877653
No 322
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=94.60 E-value=2.8 Score=38.79 Aligned_cols=151 Identities=7% Similarity=-0.045 Sum_probs=76.1
Q ss_pred CCcEEEEECCCC-eEEEeCCCCee-EEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEE
Q 016318 142 TGDLYIADAYFG-LMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLK 219 (391)
Q Consensus 142 ~g~L~V~d~~~g-l~~~d~~~g~~-~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~ 219 (391)
++.++++.+..+ |...|.++|+. +.+... .........+++.++|.+.++.+... ....+..+..++.+..
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~--~~~v~~v~~vafSpdG~~lvs~s~~~-----~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHID--DSYQASVCHKAYSEMGLLFIVLSHPC-----AKESESLRSPVFQLIV 264 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECC--C---CCCEEEEEEETTEEEEEEC-----------------CCEEEEE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCC--CcceeeeEEEEECCCCCEEEEeccCC-----CcceeeccCCCcEEEE
Confidence 567888766655 77789998864 333211 11123556678999998777653210 0123445666778888
Q ss_pred EeCCCCeEEEecc----CCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeecccCCCCC-ceEeCCCCCEE
Q 016318 220 YDPTTKQTTVLLR----NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPD-NVRTNEKGEFW 294 (391)
Q Consensus 220 ~d~~~~~~~~~~~----~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~~~~g~p~-~i~~d~~G~lw 294 (391)
+|+.+++...... ......-+..+.++. +.++-+..+.|..+++...+ ....+......+. .++++++|.+.
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~-~lASgS~DgTIkIWDl~tGk--~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQAGRFLEGDVKDH-CAAAILTSGTIAIWDLLLGQ--CTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp EETTTTEEEEEEEECCCTTCCCCEEEEEEETT-EEEEEETTSCEEEEETTTCS--EEEEECCC--CCCCEEEECSSSSEE
T ss_pred EECCCCEEEEEEEeeccCCCcceeEccccCCC-EEEEEcCCCcEEEEECCCCc--EEEEecCCCCCeEEEEEECCCCCEE
Confidence 9999887543220 000000111222244 44554456677777765321 1122221111233 37899999977
Q ss_pred EEEcCCCc
Q 016318 295 VAIHCRRS 302 (391)
Q Consensus 295 va~~~~~~ 302 (391)
++....+.
T Consensus 342 aSGS~D~T 349 (356)
T 2w18_A 342 LAGQKDGN 349 (356)
T ss_dssp EEECTTSC
T ss_pred EEEECCCc
Confidence 76655444
No 323
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.05 E-value=5.4 Score=39.83 Aligned_cols=82 Identities=16% Similarity=0.148 Sum_probs=45.7
Q ss_pred CCceEEEEeCCCCeEEEec-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccccCccceeec-ccCCC--CCceEeC
Q 016318 213 DTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGY--PDNVRTN 288 (391)
Q Consensus 213 ~~g~l~~~d~~~~~~~~~~-~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~~~g~~~~~~-~~~g~--p~~i~~d 288 (391)
..|.|..+|+.+++..--. .......|. +.-.+..+|++ +..+.|+.++.+. |+ +.+. .++.. -.-+...
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~-~~tagg~vf~g-t~dg~l~A~D~~t---G~-~lW~~~l~~g~~~~P~~y~ 524 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGT-MATAGDLVFYG-TLDGYLKARDSDT---GD-LLWKFKIPSGAIGYPMTYT 524 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBC-EEETTTEEEEE-CTTSEEEEEETTT---CC-EEEEEECSSCCCSCCEEEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcc-eEecCCEEEEE-CCCCeEEEEECCC---CC-EEEEeeCCCCcEeccEEEE
Confidence 4589999999999764322 121111232 22345557776 5677899898543 22 2222 23321 1114445
Q ss_pred CCCCEEEEEcCC
Q 016318 289 EKGEFWVAIHCR 300 (391)
Q Consensus 289 ~~G~lwva~~~~ 300 (391)
.+|+.||+...+
T Consensus 525 ~~G~qyv~~~~G 536 (599)
T 1w6s_A 525 HKGTQYVAIYYG 536 (599)
T ss_dssp ETTEEEEEEEEC
T ss_pred eCCEEEEEEEcc
Confidence 689999887654
No 324
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=93.76 E-value=7.2 Score=40.30 Aligned_cols=159 Identities=12% Similarity=0.040 Sum_probs=84.8
Q ss_pred CcceEEEccC-CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-CCcE
Q 016318 70 GPESMAFDPL-GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGDL 145 (391)
Q Consensus 70 gPe~i~~d~~-G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~-~g~L 145 (391)
.-.+|++++. .+.+|+++..+.|+|-+.. .|+.+.... . ...-.......|++++. .+.+
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~-~---------------~~~~~~~~i~~ia~dp~~~~~i 79 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFI-E---------------AQDMNIMGTESIALDPNNPDRL 79 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTC-C---------------GGGGGGCSEEEEEEETTEEEEE
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCC-C---------------cccccCCceeEEEECCCCCCEE
Confidence 3457888874 3459999988999998755 566542100 0 00001223567888863 3578
Q ss_pred EEEECC------CCeEEEeCCCCeeEEceeccC--C-Ccc-cCCcceeecCC--CCEEEEeCCCcccchhheeeecccCC
Q 016318 146 YIADAY------FGLMKVGPEGGLATSLATEAE--G-VPL-RFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 146 ~V~d~~------~gl~~~d~~~g~~~~~~~~~~--~-~~~-~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
|++... .+|++-+-.+...+.+..... + .+. .....+++++. +.+|+...
T Consensus 80 ~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~------------------ 141 (789)
T 1sqj_A 80 YLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR------------------ 141 (789)
T ss_dssp EEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS------------------
T ss_pred EEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec------------------
Confidence 998643 346666544445555432211 0 000 12346888763 46777652
Q ss_pred CceEEEEeCCCCeEEEeccCC------CCcceEEEcc-CCCEEEEEeCCCCeEEEE
Q 016318 214 TGRVLKYDPTTKQTTVLLRNL------QFPNGLSLSK-DKSFFVFCEGSVGRLHKY 262 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~~~~------~~~ngia~~~-d~~~l~v~et~~~~I~~~ 262 (391)
.++|++-+-.....+.+.... .....|+++| +.+.+|++......|++-
T Consensus 142 ~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S 197 (789)
T 1sqj_A 142 TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVT 197 (789)
T ss_dssp SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEE
T ss_pred cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEE
Confidence 145666554444444443210 1223566776 345688875433567664
No 325
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=93.71 E-value=7.2 Score=40.12 Aligned_cols=162 Identities=12% Similarity=0.103 Sum_probs=84.4
Q ss_pred CcceEEEccCC-CeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCcccccccc-CccCccceEEEecC-CCc
Q 016318 70 GPESMAFDPLG-RGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNE-HICGRPLGLRFDKK-TGD 144 (391)
Q Consensus 70 gPe~i~~d~~G-~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~P~gi~~d~~-~g~ 144 (391)
.-.+|++++.+ +.+|+++..|+|+|-... .|+.+...... ..+..+ ........|++|+. .+.
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~------------~~~~~~~~~~~~~~~ia~dp~~~~~ 89 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIIN------------NALAGNGANLLGTESIALDPHNPDR 89 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBT------------TCSSSCCCCCCSEEEEECCTTCTTC
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccc------------cccCCCcccccceeEEEECCCCCCE
Confidence 44588898865 679999988889998655 56654321000 000000 01123467788863 467
Q ss_pred EEEEECC-------CCeEEEeCCCCeeEEceeccC--CC-ccc-CCcceeecC--CCCEEEEeCCCcccchhheeeeccc
Q 016318 145 LYIADAY-------FGLMKVGPEGGLATSLATEAE--GV-PLR-FTNDLDIDD--EGNVYFTDSSTNYQRRNFMQLVFSA 211 (391)
Q Consensus 145 L~V~d~~-------~gl~~~d~~~g~~~~~~~~~~--~~-~~~-~~~~l~~d~--~G~ly~td~~~~~~~~~~~~~~~~~ 211 (391)
+|++... .+|++-+-.+...+.+..... +. ... ....|++++ .+.+|+...
T Consensus 90 ~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~---------------- 153 (763)
T 3a0f_A 90 LYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR---------------- 153 (763)
T ss_dssp EEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS----------------
T ss_pred EEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC----------------
Confidence 9997642 346655444444554432211 00 000 114588876 367888753
Q ss_pred CCCceEEEEeCCCCeEEEeccCCC-------CcceEEEccC-CCEEEEEeCCCCeEEEE
Q 016318 212 EDTGRVLKYDPTTKQTTVLLRNLQ-------FPNGLSLSKD-KSFFVFCEGSVGRLHKY 262 (391)
Q Consensus 212 ~~~g~l~~~d~~~~~~~~~~~~~~-------~~ngia~~~d-~~~l~v~et~~~~I~~~ 262 (391)
.++|++-+-.....+.+. .+. ....|+++|. .+.+|++....+.|++-
T Consensus 154 --~~~l~~S~DgG~TW~~~~-~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S 209 (763)
T 3a0f_A 154 --TQGLWRSTDRAQTWSRMN-QLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVT 209 (763)
T ss_dssp --SSCEEEESSTTSSCEECT-TSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEEE
T ss_pred --CCcEEEECCCCcCccccc-cCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEEE
Confidence 246666544333444433 111 1235677764 34488775433246654
No 326
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=93.23 E-value=8.4 Score=39.43 Aligned_cols=108 Identities=17% Similarity=0.201 Sum_probs=60.0
Q ss_pred cceEEEccC-CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecC-CCcEE
Q 016318 71 PESMAFDPL-GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGDLY 146 (391)
Q Consensus 71 Pe~i~~d~~-G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~-~g~L~ 146 (391)
..+|++++. .+.+|+++..|+|+|.+.. .|+.+..... ...-.......|++|+. .+.+|
T Consensus 25 i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~----------------~~~~~~~~i~~i~~dp~~~~~v~ 88 (737)
T 2cn3_A 25 MPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQ----------------MDEYSYYGVESIATDPVDPNRVY 88 (737)
T ss_dssp CCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCC----------------GGGGGGGCEEEEEECSSSTTCEE
T ss_pred eeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccC----------------cccccCCCcceEEeCCCCCCEEE
Confidence 447889875 2459999988889999755 5665421100 00000122457888863 46899
Q ss_pred EEECC---------CCeEEEeCCCCeeEEceeccC-C--Ccc-cCCcceeecCC--CCEEEEe
Q 016318 147 IADAY---------FGLMKVGPEGGLATSLATEAE-G--VPL-RFTNDLDIDDE--GNVYFTD 194 (391)
Q Consensus 147 V~d~~---------~gl~~~d~~~g~~~~~~~~~~-~--~~~-~~~~~l~~d~~--G~ly~td 194 (391)
++... .+|++-.-.+...+.+..... + .+. .....|++++. +.+|++.
T Consensus 89 v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 89 IVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred EEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 98632 346666544444454432211 0 000 12357888874 5788875
No 327
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.64 E-value=6.4 Score=40.36 Aligned_cols=101 Identities=7% Similarity=0.058 Sum_probs=56.7
Q ss_pred CCcceeec-CCCC-EEEEeCCCcccchhheeeecccCCCceEEEEeCCCC-eEEEeccCCC-CcceEEEccCCCEEEEEe
Q 016318 178 FTNDLDID-DEGN-VYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK-QTTVLLRNLQ-FPNGLSLSKDKSFFVFCE 253 (391)
Q Consensus 178 ~~~~l~~d-~~G~-ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~~~~~~~-~~ngia~~~d~~~l~v~e 253 (391)
...+..++ +||+ |.++.+.. +.....|+.+|.+++ +. +.+.+. ...+++++||++.|+++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~-------------G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMS-------------GNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESS-------------SSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCC-------------CCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEE
Confidence 34567889 9996 55544210 112235999999888 62 111111 134789999998777664
Q ss_pred CC-C---CeEEEEEeccccCccceeecc-cCCCCCceEeCCCCCE
Q 016318 254 GS-V---GRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEKGEF 293 (391)
Q Consensus 254 t~-~---~~I~~~~~~g~~~g~~~~~~~-~~g~p~~i~~d~~G~l 293 (391)
.. . .+|+++++.++......++.. ...+-.++..+++|+.
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~ 284 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT 284 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE
Confidence 32 1 368888876542222223322 1122234678889983
No 328
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=91.82 E-value=6.8 Score=40.14 Aligned_cols=114 Identities=10% Similarity=0.069 Sum_probs=65.8
Q ss_pred ceEEEe-cCCCc-E-EEEECCC----CeEEEeCCCC-eeEEceeccCCCcccCCcceeecCCC-CEEEEeCCCcccchhh
Q 016318 134 LGLRFD-KKTGD-L-YIADAYF----GLMKVGPEGG-LATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRNF 204 (391)
Q Consensus 134 ~gi~~d-~~~g~-L-~V~d~~~----gl~~~d~~~g-~~~~~~~~~~~~~~~~~~~l~~d~~G-~ly~td~~~~~~~~~~ 204 (391)
.+.+++ + +|+ | |+.+... .|+.+|.+++ +. +..... ....+++..+|| .|+++....
T Consensus 177 ~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~~~----~~~~~~~WspDg~~l~y~~~d~------- 242 (751)
T 2xe4_A 177 MEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADKVS----GTNGEIVWGPDHTSLFYVTKDE------- 242 (751)
T ss_dssp EEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCCEE----EECSCCEECSSTTEEEEEEECT-------
T ss_pred eeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCcccc----CceeeEEEecCCCEEEEEEECC-------
Confidence 356888 8 554 4 4444321 2999999988 52 111111 113467888888 566664210
Q ss_pred eeeecccCCCceEEEEeCCCCeE--EEe-c-cCCCCcceEEEccCCCEEEEEeC--CCCeEEEEEeccc
Q 016318 205 MQLVFSAEDTGRVLKYDPTTKQT--TVL-L-RNLQFPNGLSLSKDKSFFVFCEG--SVGRLHKYWLIGE 267 (391)
Q Consensus 205 ~~~~~~~~~~g~l~~~d~~~~~~--~~~-~-~~~~~~ngia~~~d~~~l~v~et--~~~~I~~~~~~g~ 267 (391)
......|++++..+++. ..+ . ..-.+-.++.++|||++|+++.. ....|+.++++++
T Consensus 243 ------~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 243 ------TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp ------TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ------CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 00113688888776642 122 1 11234457889999998887653 2457888887753
No 329
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=91.25 E-value=6.3 Score=36.97 Aligned_cols=154 Identities=11% Similarity=0.014 Sum_probs=82.7
Q ss_pred CcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEEEE
Q 016318 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (391)
Q Consensus 70 gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V~d 149 (391)
....+++.++.++++++..++ ++.++.+.......... ..+++. .... ..+ +..++| . +..|+|+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~---~~~~~~------~~~~-lp~-V~~l~f-d-~~~L~v~- 103 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDS---TPLTFK------WEKE-IPD-VIFVCF-H-GDQVLVS- 103 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSS---CCCCCS------EEEE-CTT-EEEEEE-E-TTEEEEE-
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcccc---ccccce------EEee-CCC-eeEEEE-C-CCEEEEE-
Confidence 455778888888777887775 55575541110000000 001100 0111 123 788899 3 6789998
Q ss_pred CCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEE
Q 016318 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTV 229 (391)
Q Consensus 150 ~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 229 (391)
...+|..+|..+-....-..... . ..+++..-+. ++.+.++ +|.|+.+|.++++...
T Consensus 104 ~~~~l~v~dv~sl~~~~~~~~~~-~---~v~~i~~~~p-~~av~~~------------------dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 104 TRNALYSLDLEELSEFRTVTSFE-K---PVFQLKNVNN-TLVILNS------------------VNDLSALDLRTKSTKQ 160 (388)
T ss_dssp ESSEEEEEESSSTTCEEEEEECS-S---CEEEEEECSS-EEEEEET------------------TSEEEEEETTTCCEEE
T ss_pred cCCcEEEEEchhhhccCccceee-c---ceeeEEecCC-CEEEEEC------------------CCCEEEEEccCCcccc
Confidence 45668999876432111111111 1 1223322221 2333332 5888999988777655
Q ss_pred eccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEeccc
Q 016318 230 LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGE 267 (391)
Q Consensus 230 ~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~g~ 267 (391)
+. .....++++|+| +.++ ..++.|..|+.++.
T Consensus 161 ~~---~~Vs~v~WSpkG--~~vg-~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 161 LA---QNVTSFDVTNSQ--LAVL-LKDRSFQSFAWRNG 192 (388)
T ss_dssp EE---ESEEEEEECSSE--EEEE-ETTSCEEEEEEETT
T ss_pred cc---CCceEEEEcCCc--eEEE-EcCCcEEEEcCCCc
Confidence 32 356689999999 3444 34567777876653
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.65 E-value=8.6 Score=34.04 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=44.8
Q ss_pred CCcEEEEEC----------CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeeccc
Q 016318 142 TGDLYIADA----------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSA 211 (391)
Q Consensus 142 ~g~L~V~d~----------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~ 211 (391)
++.|||... ...++++|+.+++.+.+..... ...-..+++. ++.||+...... .
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~-~~~i~v~GG~~~------------~ 212 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIE---ARKNHGLVFV-KDKIFAVGGQNG------------L 212 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSS---CCBSCEEEEE-TTEEEEECCEET------------T
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccc---hhhcceEEEE-CCEEEEEeCCCC------------C
Confidence 578888643 2348999999998777642211 1122223333 678888752100 0
Q ss_pred CCCceEEEEeCCCCeEEEec
Q 016318 212 EDTGRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 212 ~~~g~l~~~d~~~~~~~~~~ 231 (391)
.....+++||+.+++.+.+.
T Consensus 213 ~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 213 GGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp EEBCCEEEEETTTTEEEECC
T ss_pred CCCceEEEeeCCCCcEEECC
Confidence 11346899999999887764
No 331
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=90.63 E-value=6.9 Score=36.71 Aligned_cols=133 Identities=11% Similarity=0.084 Sum_probs=79.7
Q ss_pred ccCcceEEEccCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEecCCCcEEE
Q 016318 68 IQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 68 ~~gPe~i~~d~~G~~ly~~~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
+.++..+++ +|+.++++ .++.|..|+......-.... .++ .....+...+ .++.+
T Consensus 87 lp~V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~-----~~~---------------~~v~~i~~~~--p~~av 141 (388)
T 1xip_A 87 IPDVIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVT-----SFE---------------KPVFQLKNVN--NTLVI 141 (388)
T ss_dssp CTTEEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEE-----ECS---------------SCEEEEEECS--SEEEE
T ss_pred CCCeeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccc-----eee---------------cceeeEEecC--CCEEE
Confidence 445788899 78888998 78899999865211110000 000 0112333332 24666
Q ss_pred EECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeE
Q 016318 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQT 227 (391)
Q Consensus 148 ~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 227 (391)
++..+.|+.+|.+++....+. ..+..++..++| +.++.. +|.+..|++++++.
T Consensus 142 ~~~dG~L~v~dl~~~~~~~~~--------~~Vs~v~WSpkG-~~vg~~------------------dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 142 LNSVNDLSALDLRTKSTKQLA--------QNVTSFDVTNSQ-LAVLLK------------------DRSFQSFAWRNGEM 194 (388)
T ss_dssp EETTSEEEEEETTTCCEEEEE--------ESEEEEEECSSE-EEEEET------------------TSCEEEEEEETTEE
T ss_pred EECCCCEEEEEccCCcccccc--------CCceEEEEcCCc-eEEEEc------------------CCcEEEEcCCCccc
Confidence 665555888888766554332 246678899999 444432 47788888888874
Q ss_pred ---EEe------cc---CCCCcceEEEccCCCEEEEE
Q 016318 228 ---TVL------LR---NLQFPNGLSLSKDKSFFVFC 252 (391)
Q Consensus 228 ---~~~------~~---~~~~~ngia~~~d~~~l~v~ 252 (391)
..+ .+ +-....+|++.+++.++.+-
T Consensus 195 ~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 195 EKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 233 11 22456688888888866553
No 332
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=90.32 E-value=0.31 Score=45.52 Aligned_cols=59 Identities=10% Similarity=0.035 Sum_probs=32.7
Q ss_pred CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccCCCCcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 016318 187 EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 265 (391)
Q Consensus 187 ~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngia~~~d~~~l~v~et~~~~I~~~~~~ 265 (391)
++.+|+++. +|.|+.+|.++|+..--... .......+..+++ +|++.+..+.|+.++.+
T Consensus 9 ~~~v~~gs~------------------dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 9 ETLLFVSTL------------------DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TTEEEEEET------------------TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC---
T ss_pred CCEEEEEcC------------------CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECC
Confidence 567888874 37899999988876432222 2222222334565 56665667788888864
No 333
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=89.47 E-value=8.5 Score=39.38 Aligned_cols=125 Identities=12% Similarity=0.121 Sum_probs=72.3
Q ss_pred cCccceEEEecC-CCcEEEEECCCCeEEEeCCCCeeEEceeccCCC--cccCCcceeecC--CCCEEEEeCCCcccchhh
Q 016318 130 CGRPLGLRFDKK-TGDLYIADAYFGLMKVGPEGGLATSLATEAEGV--PLRFTNDLDIDD--EGNVYFTDSSTNYQRRNF 204 (391)
Q Consensus 130 ~g~P~gi~~d~~-~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~--~~~~~~~l~~d~--~G~ly~td~~~~~~~~~~ 204 (391)
.++..+|++++. .+.+|++....||++-+-.+...+.+....... .......|++|+ .+.+|++.......+
T Consensus 22 ~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~--- 98 (737)
T 2cn3_A 22 GGFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDW--- 98 (737)
T ss_dssp CSCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSS---
T ss_pred cceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccc---
Confidence 348889999874 367999876678999987777777654321100 123467889997 358999863210000
Q ss_pred eeeecccCCCceEEEEeCCCCeEEEeccCCC---------CcceEEEccC-CCEEEEEeCCCCeEEEEE
Q 016318 205 MQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQ---------FPNGLSLSKD-KSFFVFCEGSVGRLHKYW 263 (391)
Q Consensus 205 ~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~---------~~ngia~~~d-~~~l~v~et~~~~I~~~~ 263 (391)
....++|++-.-.....+.+..... ....++++|. .+.+|++......|+|-.
T Consensus 99 ------~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~ 161 (737)
T 2cn3_A 99 ------LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRST 161 (737)
T ss_dssp ------SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEES
T ss_pred ------ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeC
Confidence 0013567766544444444432211 1247899875 355777632235777653
No 334
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=89.10 E-value=5.3 Score=40.20 Aligned_cols=115 Identities=14% Similarity=0.173 Sum_probs=72.0
Q ss_pred ccceEEEecCCCcEEEEECC------------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcc
Q 016318 132 RPLGLRFDKKTGDLYIADAY------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNY 199 (391)
Q Consensus 132 ~P~gi~~d~~~g~L~V~d~~------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~ 199 (391)
.+...++.+.+++|||.... ..+.++|+.+++.+.+..... ....+..++++..+|.||+....
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-~~~~~~~~~~~~~~g~lyv~GG~--- 262 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-KHDMFCPGISMDGNGQIVVTGGN--- 262 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC-SCCCSSCEEEECTTSCEEEECSS---
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC-CCCCccccccCCCCCCEEEeCCC---
Confidence 35577776536788886321 127889999987766533211 11234456777789999998632
Q ss_pred cchhheeeecccCCCceEEEEeCCCCeEEEeccCCCCc---ceEEEccCCCEEEEEeC-CC-----CeEEEEEec
Q 016318 200 QRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEG-SV-----GRLHKYWLI 265 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---ngia~~~d~~~l~v~et-~~-----~~I~~~~~~ 265 (391)
....+.+||+.+++.+.+. .+..+ .+.++.+|++ +|+.-- .. ..+++|+..
T Consensus 263 -------------~~~~v~~yd~~t~~W~~~~-~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 263 -------------DAKKTSLYDSSSDSWIPGP-DMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp -------------STTCEEEEEGGGTEEEECC-CCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETT
T ss_pred -------------CCCceEEecCcCCceeECC-CCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCC
Confidence 1236999999998887764 23222 3456666888 666633 11 468888764
No 335
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=88.40 E-value=8.3 Score=39.67 Aligned_cols=160 Identities=13% Similarity=0.038 Sum_probs=83.0
Q ss_pred eEEEcc-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCccceEEEec-CCCcEEEE
Q 016318 73 SMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK-KTGDLYIA 148 (391)
Q Consensus 73 ~i~~d~-~G~~ly~~~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P~gi~~d~-~~g~L~V~ 148 (391)
.|++|+ +.+.+|++ .++.|++-... .|+.+....+. +. ..+.-|.+++ ++++||++
T Consensus 592 ~i~~d~~~~~~~y~g-~~g~v~~S~DgG~tW~~~~~~lp~----~~---------------~~~~~i~~~~~~~~~l~~~ 651 (763)
T 3a0f_A 592 GIAADRVQANTFYVY-VEGDFFVSTDGGKSYTKKGNGLPC----CW---------------TYTGTPVTSNLRAGELWVS 651 (763)
T ss_dssp CEEECSSSTTCEEEE-ETTEEEEESSTTSBCEEECBTSCC----SS---------------CCCEEEEECSSSTTCEEEE
T ss_pred eEEEeccCCCEEEEE-cCCCEEEEeCCCcCccccccCCCc----cc---------------CccccEEECCCCCCcEEEE
Confidence 677776 34558888 46778776433 56554211000 00 0011156654 36789999
Q ss_pred ECCCCeEEEeCCCCeeEEceeccCCCc-ccCCcceeec-C-CCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCC
Q 016318 149 DAYFGLMKVGPEGGLATSLATEAEGVP-LRFTNDLDID-D-EGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTK 225 (391)
Q Consensus 149 d~~~gl~~~d~~~g~~~~~~~~~~~~~-~~~~~~l~~d-~-~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 225 (391)
....+|++-+-.+...+.+....+... ...-.++++. . ...||+.... +....++|++-+-...
T Consensus 652 ~~~~~l~~S~D~G~tW~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~ 718 (763)
T 3a0f_A 652 VKGVGIYHSTDFGNTFTALAGSGSSLNPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGG 718 (763)
T ss_dssp ETTTEEEEESSTTSBCEECTTBTTTBEEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTS
T ss_pred cCCCeEEEEcCCCCCceEccCCCcccccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCC
Confidence 866678887655555555431111100 0001122222 2 3468876400 0012467888776655
Q ss_pred eEEEecc---CCCCcceEEEccCC-CEEEEEeCCCCeEEEEEecc
Q 016318 226 QTTVLLR---NLQFPNGLSLSKDK-SFFVFCEGSVGRLHKYWLIG 266 (391)
Q Consensus 226 ~~~~~~~---~~~~~ngia~~~d~-~~l~v~et~~~~I~~~~~~g 266 (391)
....+.. .+..+..|+.+|.. ..||++ |.++.|+.-++.|
T Consensus 719 tW~~~~~~~~~~~~~~~i~~~p~~~~~v~~~-T~GrGi~~g~~~~ 762 (763)
T 3a0f_A 719 LWTRLNDDAHNYGGATVISGDPRIYGRVYIG-MNGRGIICAQALG 762 (763)
T ss_dssp CCEECSCTTCCTBCEEEEEECTTSTTEEEEE-EBSSCEEEEESCC
T ss_pred CcEeccCccccCCCcceEEeCCCCCCEEEEe-CCCCeEEEEecCC
Confidence 6666652 22223357888754 348887 6677788877654
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=85.17 E-value=20 Score=31.75 Aligned_cols=107 Identities=16% Similarity=0.197 Sum_probs=59.3
Q ss_pred CCcEEEEECC----------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeeccc
Q 016318 142 TGDLYIADAY----------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSA 211 (391)
Q Consensus 142 ~g~L~V~d~~----------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~ 211 (391)
++.|||.... +.++++|+.+++.+.+...... +.-..+++ -+|.||+..... ..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~-~~~~iyv~GG~~------------~~ 133 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP---RNRIGVGV-IDGHIYAVGGSH------------GC 133 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC---CBTCEEEE-ETTEEEEECCEE------------TT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC---ccccEEEE-ECCEEEEEcCCC------------CC
Confidence 5788886322 3589999999887776432111 11122222 377899875210 00
Q ss_pred CCCceEEEEeCCCCeEEEeccCCC--CcceEEEccCCCEEEEEeCC-----CCeEEEEEecc
Q 016318 212 EDTGRVLKYDPTTKQTTVLLRNLQ--FPNGLSLSKDKSFFVFCEGS-----VGRLHKYWLIG 266 (391)
Q Consensus 212 ~~~g~l~~~d~~~~~~~~~~~~~~--~~ngia~~~d~~~l~v~et~-----~~~I~~~~~~g 266 (391)
.....+++||+.+++.+.+..-.. .....+.. +++ ||+.--. .+.+++|++..
T Consensus 134 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 134 IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRL-LYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE-EEEECCBCSSCBCCCEEEEETTT
T ss_pred cccccEEEECCCCCeEeECCCCCccccceEEEEE-CCE-EEEEeCCCCCCcCceEEEEeCCC
Confidence 113468999999998877643211 11223332 444 7776321 25688888543
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.05 E-value=20 Score=31.81 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=44.3
Q ss_pred CCcEEEEEC-------CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCC
Q 016318 142 TGDLYIADA-------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDT 214 (391)
Q Consensus 142 ~g~L~V~d~-------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~ 214 (391)
++.|||... ...++++|+.+++.+.+..... ...-..+++ -++.||+...... ....
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~-~~~~iyv~GG~~~------------~~~~ 221 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT---PRSMFGVAI-HKGKIVIAGGVTE------------DGLS 221 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS---CCBSCEEEE-ETTEEEEEEEEET------------TEEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC---CcccceEEE-ECCEEEEEcCcCC------------CCcc
Confidence 678888642 1349999999998777642211 111122232 3678888752100 0012
Q ss_pred ceEEEEeCCCCeEEEec
Q 016318 215 GRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 215 g~l~~~d~~~~~~~~~~ 231 (391)
..+.+||+++++.+.+.
T Consensus 222 ~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 222 ASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp EEEEEEETTTCCEEECC
T ss_pred ceEEEEECCCCeEEECC
Confidence 46889999999887764
No 338
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=84.10 E-value=21 Score=31.25 Aligned_cols=105 Identities=17% Similarity=0.248 Sum_probs=59.1
Q ss_pred CCcEEEEECC------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 142 TGDLYIADAY------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 142 ~g~L~V~d~~------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
++.|||.... ..++++|+.+++.+.+...... ..-..+++ -++.||+...... .....
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~-~~~~iyv~GG~~~------------~~~~~ 175 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA---REGAGLVV-ASGVIYCLGGYDG------------LNILN 175 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC---CBSCEEEE-ETTEEEEECCBCS------------SCBCC
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC---cccceEEE-ECCEEEEECCCCC------------Ccccc
Confidence 5788887432 2389999999888776432211 11122222 3678998752110 01235
Q ss_pred eEEEEeCCCCeEEEeccCCCCcc---eEEEccCCCEEEEEeCC-----CCeEEEEEec
Q 016318 216 RVLKYDPTTKQTTVLLRNLQFPN---GLSLSKDKSFFVFCEGS-----VGRLHKYWLI 265 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~~~~~n---gia~~~d~~~l~v~et~-----~~~I~~~~~~ 265 (391)
.+++||+.+++.+.+.. +..+. .++. -+++ ||+.-.. .+.+++|+++
T Consensus 176 ~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 176 SVEKYDPHTGHWTNVTP-MATKRSGAGVAL-LNDH-IYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp CEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTE-EEEECCBCSSSBCCCEEEEETT
T ss_pred eEEEEeCCCCcEEeCCC-CCcccccceEEE-ECCE-EEEEeCCCCCcccceEEEEeCC
Confidence 79999999998887642 22221 2222 2444 6666322 2467777754
No 339
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=83.65 E-value=22 Score=31.12 Aligned_cols=107 Identities=15% Similarity=0.117 Sum_probs=59.2
Q ss_pred CCcEEEEECC------CCeEEEeCCCCe---eEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccC
Q 016318 142 TGDLYIADAY------FGLMKVGPEGGL---ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAE 212 (391)
Q Consensus 142 ~g~L~V~d~~------~gl~~~d~~~g~---~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~ 212 (391)
++.|||.... ..++++|+.+++ .+.+..... .+.-..++. -++.||+..... ...
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~---~r~~~~~~~-~~~~lyv~GG~~------------~~~ 125 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNV---RRGLAGATT-LGDMIYVSGGFD------------GSR 125 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSS---CCBSCEEEE-ETTEEEEECCBC------------SSC
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCC---CccceeEEE-ECCEEEEEcccC------------CCc
Confidence 5788886332 349999999887 666532211 111122222 367899885221 011
Q ss_pred CCceEEEEeCCCCeEEEeccCC--CCcceEEEccCCCEEEEEeC-----CCCeEEEEEecc
Q 016318 213 DTGRVLKYDPTTKQTTVLLRNL--QFPNGLSLSKDKSFFVFCEG-----SVGRLHKYWLIG 266 (391)
Q Consensus 213 ~~g~l~~~d~~~~~~~~~~~~~--~~~ngia~~~d~~~l~v~et-----~~~~I~~~~~~g 266 (391)
....+++||+.+++.+.+..-. ......+. -+++ ||+.-- ..+.+++|++..
T Consensus 126 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 126 RHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGV-IYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp BCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTE-EEEECCBCSSCBCCCEEEEETTT
T ss_pred ccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCE-EEEECCCCCCcccceEEEEeCCC
Confidence 2357999999999887764221 11122332 2555 777632 135688888553
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=82.20 E-value=39 Score=34.15 Aligned_cols=81 Identities=6% Similarity=0.027 Sum_probs=46.3
Q ss_pred eEEEecCCCcEEEEECCC---CeEEEeCCCCeeEEceeccCCC-cccCCcceeecCC-CCEEEEeCCCcccchhheeeec
Q 016318 135 GLRFDKKTGDLYIADAYF---GLMKVGPEGGLATSLATEAEGV-PLRFTNDLDIDDE-GNVYFTDSSTNYQRRNFMQLVF 209 (391)
Q Consensus 135 gi~~d~~~g~L~V~d~~~---gl~~~d~~~g~~~~~~~~~~~~-~~~~~~~l~~d~~-G~ly~td~~~~~~~~~~~~~~~ 209 (391)
+.+.-. ++.|||..... .++++|+.+++.+.+....... +......++++.+ |.||+......-
T Consensus 494 ~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~---------- 562 (695)
T 2zwa_A 494 SACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMD---------- 562 (695)
T ss_dssp EEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTT----------
T ss_pred eEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCC----------
Confidence 444423 67898874332 4999999999888765311111 1112222454554 789998622100
Q ss_pred ccCCCceEEEEeCCCCe
Q 016318 210 SAEDTGRVLKYDPTTKQ 226 (391)
Q Consensus 210 ~~~~~g~l~~~d~~~~~ 226 (391)
.......+++||+.+.+
T Consensus 563 ~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 563 QTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SSCBCCEEEEEEECTTC
T ss_pred CCeeeCcEEEEEccCCc
Confidence 00123579999999887
No 341
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=81.24 E-value=45 Score=34.31 Aligned_cols=121 Identities=12% Similarity=0.046 Sum_probs=71.3
Q ss_pred cCccceEEEecC-CCcEEEEECCCCeEEEeCCCCeeEEceeccCCC--cccCCcceeecCC--CCEEEEeCCCcccchhh
Q 016318 130 CGRPLGLRFDKK-TGDLYIADAYFGLMKVGPEGGLATSLATEAEGV--PLRFTNDLDIDDE--GNVYFTDSSTNYQRRNF 204 (391)
Q Consensus 130 ~g~P~gi~~d~~-~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~--~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~ 204 (391)
.++..+|++++. .+.+|++....+|++-+-.+...+.+....... ......+|++++. +.+|++..... +
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~--~--- 88 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYV--G--- 88 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCT--T---
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccC--C---
Confidence 468889999874 367999987788999887766666654321100 1234678888874 57888752100 0
Q ss_pred eeeecccCCCceEEEEeCCCCeEEEeccCCC---------CcceEEEccC-CCEEEEEeCCCCeEEEEE
Q 016318 205 MQLVFSAEDTGRVLKYDPTTKQTTVLLRNLQ---------FPNGLSLSKD-KSFFVFCEGSVGRLHKYW 263 (391)
Q Consensus 205 ~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~---------~~ngia~~~d-~~~l~v~et~~~~I~~~~ 263 (391)
...+.|++-+-.....+.+...+. ....++++|. .+.+|+. +....|+|-.
T Consensus 89 -------~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~~gl~~S~ 149 (789)
T 1sqj_A 89 -------DEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRTEGIWKSS 149 (789)
T ss_dssp -------SSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSSSCEEEES
T ss_pred -------CcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-eccCCEEEEC
Confidence 001567766544445555432211 1236888874 3457765 4446677653
No 342
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=79.66 E-value=32 Score=30.37 Aligned_cols=103 Identities=13% Similarity=0.073 Sum_probs=52.6
Q ss_pred CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEec
Q 016318 152 FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 152 ~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 231 (391)
..++++|+.+++.+. . .... +......-++.-++.||+........ ..........+++||+.+++.+.+.
T Consensus 13 ~~~~~yd~~~~~W~~-~-~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~------~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 13 EGAVAYDPAANECYC-A-SLSS-QVPKNHVSLVTKENQVFVAGGLFYNE------DNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp TEEEEEETTTTEEEE-E-ECCC-CSCSSEEEEECTTCCEEEEEEEEECS------SCSSSCEEEEEEEEETTTTEEEECC
T ss_pred CceEEECCCCCeEec-C-CCCC-CCCccceEEEEECCEEEEEcCcccCC------CCCccccccceEEecCCCCeEEECC
Confidence 569999999988764 2 1111 11122222334577888875210000 0000011234899999999887764
Q ss_pred cCCCCc---ceEEEccCCCEEEEEeC--------CCCeEEEEEecc
Q 016318 232 RNLQFP---NGLSLSKDKSFFVFCEG--------SVGRLHKYWLIG 266 (391)
Q Consensus 232 ~~~~~~---ngia~~~d~~~l~v~et--------~~~~I~~~~~~g 266 (391)
. +..+ .+++.. ++ .||+.-- ..+.+++|++..
T Consensus 84 ~-~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~ 126 (315)
T 4asc_A 84 P-LPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLS 126 (315)
T ss_dssp C-BSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTT
T ss_pred C-CCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCC
Confidence 3 2222 123332 44 4777632 124588888543
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=78.61 E-value=6.7 Score=36.06 Aligned_cols=71 Identities=13% Similarity=0.130 Sum_probs=38.4
Q ss_pred CCcEEEEE-CCCC-eEEEeCCCCeeEEceec---cCCCcccCCcceee------cCCCCEEEEeCCCcccchhheeeecc
Q 016318 142 TGDLYIAD-AYFG-LMKVGPEGGLATSLATE---AEGVPLRFTNDLDI------DDEGNVYFTDSSTNYQRRNFMQLVFS 210 (391)
Q Consensus 142 ~g~L~V~d-~~~g-l~~~d~~~g~~~~~~~~---~~~~~~~~~~~l~~------d~~G~ly~td~~~~~~~~~~~~~~~~ 210 (391)
++.+||.. ...| |+.++.++|..+.-... ....++......++ ..+|.+|+...
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~--------------- 119 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM--------------- 119 (339)
T ss_dssp SSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEE---------------
T ss_pred CCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEec---------------
Confidence 45677665 2344 88888877744321111 11111111111222 25778888764
Q ss_pred cCCCceEEEEeCCCCeEEEe
Q 016318 211 AEDTGRVLKYDPTTKQTTVL 230 (391)
Q Consensus 211 ~~~~g~l~~~d~~~~~~~~~ 230 (391)
+|+++.+|..+|+..--
T Consensus 120 ---~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 120 ---RTIMYTINMLNGEIISA 136 (339)
T ss_dssp ---EEEEEEEETTTCCEEEE
T ss_pred ---CCEEEEEECCCCcEEEE
Confidence 48999999999987544
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=78.48 E-value=35 Score=30.12 Aligned_cols=97 Identities=9% Similarity=0.010 Sum_probs=53.1
Q ss_pred eEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEeCCCCeEEEeccC
Q 016318 154 LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDPTTKQTTVLLRN 233 (391)
Q Consensus 154 l~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 233 (391)
++++|+.+++.+.+...... +.-..++.. ++.||+...... . -.......+++||+.+++.+.+..
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~-~~~lyv~GG~~~-~--------~~~~~~~~~~~~d~~~~~W~~~~~- 134 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSP---RCLFGLGEA-LNSIYVVGGREI-K--------DGERCLDSVMCYDRLSFKWGESDP- 134 (315)
T ss_dssp EEEEETTTTEEEECCCBSSC---EESCEEEEE-TTEEEEECCEES-S--------TTCCBCCCEEEEETTTTEEEECCC-
T ss_pred eEEecCCCCeEEECCCCCcc---hhceeEEEE-CCEEEEEeCCcC-C--------CCCcccceEEEECCCCCcEeECCC-
Confidence 88999999888766432111 111222332 678888752100 0 001224579999999998877643
Q ss_pred CCCc---ceEEEccCCCEEEEEeCC------CCeEEEEEecc
Q 016318 234 LQFP---NGLSLSKDKSFFVFCEGS------VGRLHKYWLIG 266 (391)
Q Consensus 234 ~~~~---ngia~~~d~~~l~v~et~------~~~I~~~~~~g 266 (391)
+..+ ...+. -+++ ||+.--. .+.+++|++..
T Consensus 135 ~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 135 LPYVVYGHTVLS-HMDL-VYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp CSSCCBSCEEEE-ETTE-EEEECCBCTTSCBCCCEEEEETTT
T ss_pred CCCcccceeEEE-ECCE-EEEEeCCCCCCcccceEEEEeCCC
Confidence 2222 22333 3454 7776432 24688887543
No 345
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=78.46 E-value=34 Score=29.93 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=45.1
Q ss_pred CCcEEEEEC--------CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCC
Q 016318 142 TGDLYIADA--------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAED 213 (391)
Q Consensus 142 ~g~L~V~d~--------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~ 213 (391)
++.|||... ...++++|+.+++.+.+...... ..-..+++ -++.||+..... ....
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~-~~~~iyv~GG~~------------~~~~ 218 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR---RSGAGVGV-LNNLLYAVGGHD------------GPLV 218 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC---CBSCEEEE-ETTEEEEECCBS------------SSSB
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc---cccccEEE-ECCEEEEECCCC------------CCcc
Confidence 578888632 23489999999888776422111 11122222 267888875211 0011
Q ss_pred CceEEEEeCCCCeEEEec
Q 016318 214 TGRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 214 ~g~l~~~d~~~~~~~~~~ 231 (391)
...+++||+++++.+.+.
T Consensus 219 ~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp CCCEEEEETTTTEEEEEC
T ss_pred cceEEEEeCCCCCEeeCC
Confidence 357999999999888764
No 346
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=75.21 E-value=42 Score=29.36 Aligned_cols=107 Identities=15% Similarity=0.058 Sum_probs=60.0
Q ss_pred CCcEEEEECC-----CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCce
Q 016318 142 TGDLYIADAY-----FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGR 216 (391)
Q Consensus 142 ~g~L~V~d~~-----~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~ 216 (391)
++.|||.... ..++++|+.+++.+.+...... ..-..++ .-++.||+..... ........
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~-~~~~~iyv~GG~~-----------~~~~~~~~ 119 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP---RDSLAAC-AAEGKIYTSGGSE-----------VGNSALYL 119 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC---CBSCEEE-EETTEEEEECCBB-----------TTBSCCCC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc---ccceeEE-EECCEEEEECCCC-----------CCCcEeee
Confidence 5778886432 3489999999988776432111 1112222 2367898875210 01122357
Q ss_pred EEEEeCCCCeEEEeccCCCCc---ceEEEccCCCEEEEEeCC---------CCeEEEEEecc
Q 016318 217 VLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS---------VGRLHKYWLIG 266 (391)
Q Consensus 217 l~~~d~~~~~~~~~~~~~~~~---ngia~~~d~~~l~v~et~---------~~~I~~~~~~g 266 (391)
+++||+.+++.+.+.. +..+ ...+. -+++ +|+..-. .+.+++|++..
T Consensus 120 ~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 120 FECYDTRTESWHTKPS-MLTQRCSHGMVE-ANGL-IYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp EEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTE-EEEECCEESCTTTCEECCCEEEEETTT
T ss_pred EEEEeCCCCceEeCCC-CcCCcceeEEEE-ECCE-EEEECCCCCCCCcccccceEEEeCCCC
Confidence 9999999998877642 2221 22222 2454 7776321 35588887543
No 347
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=73.80 E-value=46 Score=29.21 Aligned_cols=106 Identities=11% Similarity=0.142 Sum_probs=60.2
Q ss_pred CCcEEEEEC------CCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 142 TGDLYIADA------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 142 ~g~L~V~d~------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
++.|||... ...++++|+.+++.+.+..... .+.-...++. ++.||+...... .....
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~-~~~iyv~GG~~~------------~~~~~ 184 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT---RRIGVGVAVL-NRLLYAVGGFDG------------TNRLN 184 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS---CCBSCEEEEE-TTEEEEECCBCS------------SCBCC
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc---cccceEEEEE-CCEEEEEeCCCC------------CCcCc
Confidence 578888632 2358999999988877643211 1112223333 678988752110 01135
Q ss_pred eEEEEeCCCCeEEEeccCCCCc---ceEEEccCCCEEEEEeCC-----CCeEEEEEecc
Q 016318 216 RVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS-----VGRLHKYWLIG 266 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~~~~~---ngia~~~d~~~l~v~et~-----~~~I~~~~~~g 266 (391)
.+++||+.+.+.+.+.. +..+ ..++.. +++ ||+.... ...+++|+++.
T Consensus 185 ~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 185 SAECYYPERNEWRMITA-MNTIRSGAGVCVL-HNC-IYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp CEEEEETTTTEEEECCC-CSSCCBSCEEEEE-TTE-EEEECCBCSSSBCCCEEEEETTT
T ss_pred eEEEEeCCCCeEeeCCC-CCCccccceEEEE-CCE-EEEEeCCCCCCccceEEEEeCCC
Confidence 79999999998877642 2222 223332 444 7776322 25688887553
No 348
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=71.29 E-value=52 Score=28.67 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=59.1
Q ss_pred CCcEEEEECC------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCc
Q 016318 142 TGDLYIADAY------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTG 215 (391)
Q Consensus 142 ~g~L~V~d~~------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g 215 (391)
++.|||.... ..++++|+.+++.+.+...... +.-..+++ -+|.||+..... ......
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~-~~~~iyv~GG~~------------~~~~~~ 124 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR---RSTLGAAV-LNGLLYAVGGFD------------GSTGLS 124 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEE-ETTEEEEEEEEC------------SSCEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc---ccceEEEE-ECCEEEEEcCCC------------CCccCc
Confidence 5788886432 3489999999888776432111 11122222 367888875210 001124
Q ss_pred eEEEEeCCCCeEEEeccCCCCc---ceEEEccCCCEEEEEeCC-------CCeEEEEEecc
Q 016318 216 RVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS-------VGRLHKYWLIG 266 (391)
Q Consensus 216 ~l~~~d~~~~~~~~~~~~~~~~---ngia~~~d~~~l~v~et~-------~~~I~~~~~~g 266 (391)
.+.+||+.+++.+.+.. +..+ .+++. -+++ ||+..-. .+.+++|++..
T Consensus 125 ~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAP-MNTRRSSVGVGV-VGGL-LYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp EEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTE-EEEECCEETTTTEECCCEEEEETTT
T ss_pred eEEEEeCCCCeEeecCC-CCCcccCceEEE-ECCE-EEEEeCCCCCCCccccEEEEEeCCC
Confidence 68999999998877642 2222 22332 2444 7776321 24588887543
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=65.10 E-value=77 Score=28.32 Aligned_cols=117 Identities=9% Similarity=-0.008 Sum_probs=52.0
Q ss_pred CEEEEEeCC--ceeEEEeecCCCcccCCCCCCccccccccCccCcc-ceEEEecCCCcEEEEEC-------CCCeEEEeC
Q 016318 90 GRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRP-LGLRFDKKTGDLYIADA-------YFGLMKVGP 159 (391)
Q Consensus 90 g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~P-~gi~~d~~~g~L~V~d~-------~~gl~~~d~ 159 (391)
..+.++++. .|+.+..... ..+- ++++.. ++.|||... ...++++|.
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~---------------------~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPW---------------------YGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSS---------------------CCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCC---------------------CCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEe
Confidence 478888877 6776643210 1111 344444 578888632 234777765
Q ss_pred --CCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccch-hhee-ee--cc-cCCCceEEEEeCCCCeEEEec
Q 016318 160 --EGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRR-NFMQ-LV--FS-AEDTGRVLKYDPTTKQTTVLL 231 (391)
Q Consensus 160 --~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~-~~~~-~~--~~-~~~~g~l~~~d~~~~~~~~~~ 231 (391)
++.+.+.+..... +......-++.-++.||+......-... .+.. .. .. ......+.+||+++.+.+.+.
T Consensus 225 d~~~~~W~~~~~~~~--~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 225 TGNNLKWNKLAPVSS--PDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp C---CEEEECCCSST--TTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred cCCCCcEEecCCCCC--CcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 7777666533211 1111122233346789887521000000 0000 00 00 001135789999988877653
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=63.91 E-value=1.3e+02 Score=30.35 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=67.7
Q ss_pred ceEEEecCCCcEEEEECC-------CCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhhee
Q 016318 134 LGLRFDKKTGDLYIADAY-------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQ 206 (391)
Q Consensus 134 ~gi~~d~~~g~L~V~d~~-------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~ 206 (391)
++++....++.|||.... +.++++|+.+++.+.+..... .+.-...++-.+|.||+.....
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~---~R~~h~~~~~~~~~iyv~GG~~--------- 510 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH---TRFRHSACSLPDGNVLILGGVT--------- 510 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB---CCBSCEEEECTTSCEEEECCBC---------
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC---CcccceEEEEcCCEEEEECCCC---------
Confidence 344443114678886331 348999999988877642211 1222333443488999986221
Q ss_pred eecccCCCceEEEEeCCCCeEEEeccC--CC----CcceEEEccCCCEEEEEeCC-------CCeEEEEEeccc
Q 016318 207 LVFSAEDTGRVLKYDPTTKQTTVLLRN--LQ----FPNGLSLSKDKSFFVFCEGS-------VGRLHKYWLIGE 267 (391)
Q Consensus 207 ~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~----~~ngia~~~d~~~l~v~et~-------~~~I~~~~~~g~ 267 (391)
..+.+++||+.+.+.+.+... +. ....++++.+.+.||+.... .+.+++|++...
T Consensus 511 ------~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 511 ------EGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp ------SSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred ------CCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 112799999999998877531 11 12235556553458877432 256999987654
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=60.42 E-value=94 Score=27.73 Aligned_cols=100 Identities=17% Similarity=0.126 Sum_probs=52.0
Q ss_pred CCcEEEEECC--CCeEEEeCCC--CeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceE
Q 016318 142 TGDLYIADAY--FGLMKVGPEG--GLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRV 217 (391)
Q Consensus 142 ~g~L~V~d~~--~gl~~~d~~~--g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l 217 (391)
++.|||.-.. +.++++|+.+ .+.+.+... ... .+.-..+++ -+|.||+......... -.......+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~-p~~-~R~~~~~~~-~~~~lyv~GG~~~~~~-------~~~~~~~~v 88 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAF-PGG-PRDQATSAF-IDGNLYVFGGIGKNSE-------GLTQVFNDV 88 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCC-TTC-CCBSCEEEE-ETTEEEEECCEEECTT-------SCEEECCCE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCC-CCC-cCccceEEE-ECCEEEEEcCCCCCCC-------ccceeeccE
Confidence 6789986432 3499999974 666665331 111 111222232 2678998752100000 000113569
Q ss_pred EEEeCCCCeEEEeccCCCCc---ceEEEccCCCEEEEEe
Q 016318 218 LKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCE 253 (391)
Q Consensus 218 ~~~d~~~~~~~~~~~~~~~~---ngia~~~d~~~l~v~e 253 (391)
++||+.+.+.+.+......+ ...+. .+++ ||+.-
T Consensus 89 ~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~-iyv~G 125 (357)
T 2uvk_A 89 HKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGK-AYVTG 125 (357)
T ss_dssp EEEETTTTEEEECSCCCSSCCSSEEEEE-ETTE-EEEEE
T ss_pred EEEeCCCCcEEECCCCCCcccccceEEE-ECCE-EEEEe
Confidence 99999999888765422121 12233 4555 77664
No 352
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=59.87 E-value=19 Score=33.01 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=38.6
Q ss_pred CCcEEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeecccCCCceEEEEe
Q 016318 142 TGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYD 221 (391)
Q Consensus 142 ~g~L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d 221 (391)
++.+||++....|+.+|.++|+..=-.......+.....+-+...+|.+|+.... .+|+|+.++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~----------------~dG~l~a~~ 73 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPF----------------GDGNIYYFN 73 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCS----------------TTTEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEEC----------------CCCEEEEEE
Confidence 4678888877779999988885432111110011100000011135567776521 258899999
Q ss_pred CCCCeEE
Q 016318 222 PTTKQTT 228 (391)
Q Consensus 222 ~~~~~~~ 228 (391)
.++|..+
T Consensus 74 ~~~G~~~ 80 (339)
T 2be1_A 74 AHQGLQK 80 (339)
T ss_dssp TTTEEEE
T ss_pred CCCCcEE
Confidence 8877543
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=57.24 E-value=47 Score=32.82 Aligned_cols=67 Identities=18% Similarity=0.125 Sum_probs=39.7
Q ss_pred cCccCccceEEEecCCCcEEEEECCC--CeEEEeCCC------CeeEEcee--ccCCCcccCCcceeecCCCCEEEEe
Q 016318 127 EHICGRPLGLRFDKKTGDLYIADAYF--GLMKVGPEG------GLATSLAT--EAEGVPLRFTNDLDIDDEGNVYFTD 194 (391)
Q Consensus 127 ~~~~g~P~gi~~d~~~g~L~V~d~~~--gl~~~d~~~------g~~~~~~~--~~~~~~~~~~~~l~~d~~G~ly~td 194 (391)
.+....|+|+.++| +|+-+++.... .+.+++.+. +++..... ..+-.....|-..++|++|+.|.|-
T Consensus 319 iP~pksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtl 395 (638)
T 3sbq_A 319 VPVPKNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTL 395 (638)
T ss_dssp EEESSSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEE
T ss_pred EeCCCCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeee
Confidence 34567899999999 56654444332 277776542 11100000 0011123578899999999999885
No 354
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=54.51 E-value=1.5e+02 Score=29.89 Aligned_cols=34 Identities=6% Similarity=0.096 Sum_probs=20.2
Q ss_pred ceEEEecC-CCcEEEEEC------CCCeEEEeCCCCeeEEc
Q 016318 134 LGLRFDKK-TGDLYIADA------YFGLMKVGPEGGLATSL 167 (391)
Q Consensus 134 ~gi~~d~~-~g~L~V~d~------~~gl~~~d~~~g~~~~~ 167 (391)
..|++++. .+++|++.. ..+|++-+-.+...+.+
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~ 133 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQT 133 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEE
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEec
Confidence 47888874 347888764 23466655444445544
No 355
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=54.26 E-value=1.8e+02 Score=29.22 Aligned_cols=105 Identities=12% Similarity=0.107 Sum_probs=52.4
Q ss_pred EEEEECCCCeEEEeCCCCeeEEceeccCCCcccCCcceeecCC--CCEEEEeCCCcccchhheeeecccCCCceEEEEeC
Q 016318 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRNFMQLVFSAEDTGRVLKYDP 222 (391)
Q Consensus 145 L~V~d~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~--G~ly~td~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 222 (391)
+|++....||++-+-.+...+.+........+.....|+++|. +++|++..... ....++|++-+-
T Consensus 58 ~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~------------~~~~g~v~rS~D 125 (685)
T 3f6k_A 58 VIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSG------------GSRGGRIFRSSD 125 (685)
T ss_dssp -----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCT------------TCSSCEEEEESS
T ss_pred eEEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccC------------CCCCceEEEECC
Confidence 3333333567777666556666543322222223467899883 37888864210 012467777665
Q ss_pred CCCeEEEeccCCCCcceEEEccCC-CEEEEEeCCCCeEEEE
Q 016318 223 TTKQTTVLLRNLQFPNGLSLSKDK-SFFVFCEGSVGRLHKY 262 (391)
Q Consensus 223 ~~~~~~~~~~~~~~~ngia~~~d~-~~l~v~et~~~~I~~~ 262 (391)
.+...+.+.........++++|.. +.+|++ ...+.|++-
T Consensus 126 gG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~-~~~~gly~S 165 (685)
T 3f6k_A 126 FAKNFVQTDLPFHPLTQMMYSPQNSDYLLAL-STENGLWVS 165 (685)
T ss_dssp TTSSCEEEECSSCBSSCCEEETTEEEEEEEE-BTTCCEEEE
T ss_pred CCceeEeccCCCCCceEEEEecCCCCEEEEE-ECCCCEEEE
Confidence 444455443222111257787753 345544 335667774
No 356
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=44.46 E-value=1.6e+02 Score=25.66 Aligned_cols=108 Identities=13% Similarity=0.155 Sum_probs=58.9
Q ss_pred CCcEEEEECC----C--------CeEEEeCCCCeeEEceeccCCCcccCCcceeecCCCCEEEEeCCCcccchhheeeec
Q 016318 142 TGDLYIADAY----F--------GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRNFMQLVF 209 (391)
Q Consensus 142 ~g~L~V~d~~----~--------gl~~~d~~~g~~~~~~~~~~~~~~~~~~~l~~d~~G~ly~td~~~~~~~~~~~~~~~ 209 (391)
++.|||.... . .++++|+.+++.+.+...... +.-..+++. ++.||+...... -
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~-~~~iyv~GG~~~----------~ 121 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA---RCLFGLGEV-DDKIYVVAGKDL----------Q 121 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC---BCSCEEEEE-TTEEEEEEEEBT----------T
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc---ccccceEEE-CCEEEEEcCccC----------C
Confidence 6788886441 0 178999999888776432111 112223332 678888752100 0
Q ss_pred ccCCCceEEEEeCCCCeEEEeccCCCCc---ceEEEccCCCEEEEEeCC------CCeEEEEEecc
Q 016318 210 SAEDTGRVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS------VGRLHKYWLIG 266 (391)
Q Consensus 210 ~~~~~g~l~~~d~~~~~~~~~~~~~~~~---ngia~~~d~~~l~v~et~------~~~I~~~~~~g 266 (391)
.......+++||+.+.+.+.+.. +..+ ..++. .+++ ||+.--. .+.+++|++..
T Consensus 122 ~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 122 TEASLDSVLCYDPVAAKWSEVKN-LPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TCCEEEEEEEEETTTTEEEEECC-CSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTT
T ss_pred CCcccceEEEEeCCCCCEeECCC-CCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCC
Confidence 01123468999999998877642 2221 22333 3554 7775321 24588888553
No 357
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=27.22 E-value=3.6e+02 Score=24.62 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=29.4
Q ss_pred CccCccceEEEecCCCcEEEEECCCCeEEEeCCCCee
Q 016318 128 HICGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLA 164 (391)
Q Consensus 128 ~~~g~P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~ 164 (391)
.....|..|.++..-|-+|+-+-+.-|+.+|.+||..
T Consensus 257 a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 257 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 293 (365)
T ss_dssp CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcE
Confidence 3467899999997667789987665599999999854
No 358
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=26.43 E-value=1.9e+02 Score=29.14 Aligned_cols=84 Identities=15% Similarity=0.128 Sum_probs=45.7
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCC-ceeEEEeecCC-CcccCCCCC--CccccccccCccCccceEEEecCCCcEEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNN-RSELCNPKP--IATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
..+++|++...+|+|..+ +|+.++++ +...-..+++. .+..|.+.. ..+... ...+.+.=.-+.+|+.+++|++
T Consensus 20 ~hl~~d~~tg~vYvGavN-~lyqL~~~L~~~~~~~TGP~~ds~~C~pp~~~~~C~~~-~~~tdN~NklLlvd~~~~~Li~ 97 (681)
T 3oky_A 20 NHLTVHRRTGAVYVGAIN-RVYKLTGNLTIQVAHKTGPEEDNKACYPPLIVQPCSEV-LTLTNNVNKLLIIDYSENRLLA 97 (681)
T ss_dssp EEEEECTTTCCEEEEETT-EEEEECTTCCEEEEEECCCEEECTTCSSCTTTSCCCSC-CEEECCCCCEEEEEGGGTEEEE
T ss_pred EEEEEcCCCCcEEEeEEE-EEEEcCcccceeeeEeecCcCCCCCccCCcccccCccc-CCcCCccceEEEEecCCCeEEE
Confidence 367788765459999887 79999887 43333333332 345575421 111100 0111222234566665677888
Q ss_pred EECC-CCeEEE
Q 016318 148 ADAY-FGLMKV 157 (391)
Q Consensus 148 ~d~~-~gl~~~ 157 (391)
+.+. .|+..+
T Consensus 98 CGS~~qGiC~~ 108 (681)
T 3oky_A 98 CGSLYQGVCKL 108 (681)
T ss_dssp ECSSTTTCEEE
T ss_pred eeCCcCcceee
Confidence 7653 676544
No 359
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=21.94 E-value=2.9e+02 Score=26.77 Aligned_cols=84 Identities=15% Similarity=0.131 Sum_probs=43.4
Q ss_pred ceEEEccCCCeeEEEecCCEEEEEeCC-ceeEEEeecC-CCcccCCCCC--CccccccccCccCccceEEEecCCCcEEE
Q 016318 72 ESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSN-NRSELCNPKP--IATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (391)
Q Consensus 72 e~i~~d~~G~~ly~~~~~g~I~~~~~~-~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~g~P~gi~~d~~~g~L~V 147 (391)
..+++|++++.+|+|..| +|++++.+ ....-....+ ..+..|.+.. ..|.... ..+.+.-.-+.++..+++||+
T Consensus 21 ~~l~~d~~~g~lyvGA~n-~ly~Ls~~L~~~~~~~tgP~~ds~~C~p~~~~~~C~~~~-~~~dN~nkvLl~~~~~~~L~~ 98 (539)
T 3al9_A 21 NHLTVHRRTGAVYVGAIN-RVYKLTGNLTIQVAHKTGPEEDNKACYPPLIVQPCSEVL-TLTNNVNKLLIIDYSENRLLA 98 (539)
T ss_dssp EEEEECTTTCCEEEEETT-EEEEECTTCCEEEEEECCCEEECTTCSSCTTTSCCCSCC-EEECCCEEEEEEEGGGTEEEE
T ss_pred EEEEEeCCCCEEEEEEee-eEEECCCCcccccccccCCccCcccccCccchhhccccC-CCCCceEEEEEEecCCCeEEE
Confidence 467888776669999887 69999976 3222222222 1233343210 1111100 011222234556554678999
Q ss_pred EECC-CCeEEE
Q 016318 148 ADAY-FGLMKV 157 (391)
Q Consensus 148 ~d~~-~gl~~~ 157 (391)
|... .|+..+
T Consensus 99 CGS~~qg~C~~ 109 (539)
T 3al9_A 99 CGSLYQGVCKL 109 (539)
T ss_dssp EESSTTTCEEE
T ss_pred eecCCCCCcee
Confidence 8654 666544
No 360
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=20.71 E-value=5.6e+02 Score=24.46 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=29.1
Q ss_pred CccCccceEEEecCCCcEEEEECCCCeEEEeCCCCee
Q 016318 128 HICGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLA 164 (391)
Q Consensus 128 ~~~g~P~gi~~d~~~g~L~V~d~~~gl~~~d~~~g~~ 164 (391)
.....|..|.++..-|-+|+-+-+.-|+.+|..|+..
T Consensus 256 ~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 256 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred cccCceeEEEecccCCEEEEEecCceEEEEeccccee
Confidence 3467799999998677788887655599999998854
Done!