BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016319
(391 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80450|TGT3B_ARATH Trihelix transcription factor GT-3b OS=Arabidopsis thaliana
GN=GT-3B PE=1 SV=1
Length = 289
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 293 GVRRNKWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWS 352
G R +W EE K+LI +RGEL F K LW+ IS + ++ F R+P QCK +W
Sbjct: 36 GDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCKWK 95
Query: 353 SLLQKY---EESKSGNSQKSWPYFEEMNKIFS 381
+L+ ++ E ++ +++ +P++++M IF+
Sbjct: 96 NLVTRFKGCETMEAETARQQFPFYDDMQNIFT 127
>sp|Q9SDW0|TGT3A_ARATH Trihelix transcription factor GT-3a OS=Arabidopsis thaliana
GN=GT-3A PE=1 SV=1
Length = 323
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 298 KWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQK 357
+W EE K+L+ +R EL F K LW+ ++ +A++GF R+ QCKS+W +L+ +
Sbjct: 51 QWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTR 110
Query: 358 Y---EESKSGNSQKSWPYFEEMNKIF 380
Y E ++ ++ +P++ E+ IF
Sbjct: 111 YKACETTEPDAIRQQFPFYNEIQSIF 136
>sp|Q9LU92|TGT4_ARATH Trihelix transcription factor GT-4 OS=Arabidopsis thaliana GN=GT-4
PE=2 SV=1
Length = 372
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 295 RRNKWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSL 354
R W +E + LI +R E+ + F K LW++IS + +GF+R+PS C +W ++
Sbjct: 51 RAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNI 110
Query: 355 LQKYEESK-------SGNSQKSWPYFEEMNKIF 380
L++++++K SG S K Y+ E+ IF
Sbjct: 111 LKEFKKAKQHEDKATSGGSTKM-SYYNEIEDIF 142
>sp|Q9FX53|TGT1_ARATH Trihelix transcription factor GT-1 OS=Arabidopsis thaliana GN=GT-1
PE=1 SV=1
Length = 406
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 295 RRNKWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSL 354
R W +E + LI R + F K LW++IS+ + +GF+R+P+ C +W +L
Sbjct: 83 RAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNL 142
Query: 355 LQKYEESKS---GNSQKSWPYFEEMNKIF 380
L++++++K GN Y++E+ I
Sbjct: 143 LKEFKKAKHHDRGNGSAKMSYYKEIEDIL 171
>sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2
PE=2 SV=1
Length = 575
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 298 KWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQK 357
+W EV+ LI++R L + +Q + LW+EIS + G+NR+ +CK +W ++ +
Sbjct: 397 RWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNRSAKRCKEKWENINKY 456
Query: 358 YEESKSGNSQ-----KSWPYFEEMNKIFSDSD 384
+++ K N + K+ PYF ++ ++++ +
Sbjct: 457 FKKVKESNKKRPLDSKTCPYFHQLEALYNERN 488
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 297 NKWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
N+W E L+++R E+ F+ + LW+EIS + G+ R+ +CK ++ ++ +
Sbjct: 40 NRWPRPETLALLRIRSEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKFENVYK 99
Query: 357 KYEESKSGNSQKS----WPYFEEM 376
++ +K G + KS + +FEE+
Sbjct: 100 YHKRTKEGRTGKSEGKTYRFFEEL 123
>sp|Q9C882|GTL1_ARATH Trihelix transcription factor GTL1 OS=Arabidopsis thaliana GN=GTL1
PE=1 SV=2
Length = 587
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 298 KWRPEEVKKLIKMRGELHSKFQ--VVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLL 355
+W E+ LI +R + ++Q V KG LW+EIST + G+NR +CK +W ++
Sbjct: 435 RWPKAEILALINLRSGMEPRYQDNVPKG--LLWEEISTSMKRMGYNRNAKRCKEKWENIN 492
Query: 356 QKYEESKSGNSQ-----KSWPYFEEMNKIFSD 382
+ Y++ K N + K+ PYF ++ ++ +
Sbjct: 493 KYYKKVKESNKKRPQDAKTCPYFHRLDLLYRN 524
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 297 NKWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
N+W EE L+++R ++ S F+ + LW+ +S L G+ R+ +CK ++ ++ +
Sbjct: 61 NRWPREETLALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKEKFENVQK 120
Query: 357 KYEESKSG----NSQKSWPYFEEMNKIFSDSDSEAM 388
Y+ +K + K++ +F ++ + + S ++
Sbjct: 121 YYKRTKETRGGRHDGKAYKFFSQLEALNTTPPSSSL 156
>sp|Q8IWY8|ZSC29_HUMAN Zinc finger and SCAN domain-containing protein 29 OS=Homo sapiens
GN=ZSCAN29 PE=1 SV=2
Length = 852
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 299 WRPEEVKKLIKMRGE--LHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE K + + E + + L+ ++ L GF RTP QC++++ SL
Sbjct: 411 WGYEETKTYLAILSETQFYEALRNCHRNSQLYGAVAERLWEYGFLRTPEQCRTKFKSLQT 470
Query: 357 KYEESKSGNSQKSWPYFEEMNKIFS 381
Y + K+G + ++ P+FEEM+ + S
Sbjct: 471 SYRKVKNGQAPETCPFFEEMDALVS 495
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 299 WRPEEVKKLIKM--RGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE + L+ + + E + + ++ ++ L GF RT QC++++ L +
Sbjct: 248 WGYEETRTLLAILSQTEFYEALRNCHRNSQVYGAVAERLREYGFLRTLEQCRTKFKGLQK 307
Query: 357 KYEESKSGNSQKSWPYFEEMNKIFS 381
Y + KSG+ ++ P+FEEM + S
Sbjct: 308 SYRKVKSGHPPETCPFFEEMEALMS 332
>sp|Q9LZS0|PTL_ARATH Trihelix transcription factor PTL OS=Arabidopsis thaliana GN=PTL
PE=2 SV=1
Length = 591
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 298 KWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANE-GFNRTPSQCKSRWSSLLQ 356
+W +E L+++R L KF+ + LW E+S ++ E G+ R+ +C+ ++ +L +
Sbjct: 119 RWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYK 178
Query: 357 KYEESKSGNS----QKSWPYFEEMNKIFSDSDS 385
Y ++K G + K + +F ++ ++ DS++
Sbjct: 179 YYRKTKEGKAGRQDGKHYRFFRQLEALYGDSNN 211
>sp|Q9NX65|ZN434_HUMAN Zinc finger protein 434 OS=Homo sapiens GN=ZNF434 PE=2 SV=2
Length = 485
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 299 WRPEEVKKLIKM--RGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE K L+ + + + K Q + +++ ++ L +GF RTP QC++++ SL
Sbjct: 44 WGYEETKTLLAILSSSQFYGKLQTCQQNSQIYRAMAEGLWEQGFLRTPEQCRTKFKSLQL 103
Query: 357 KYEESKSGNSQKSWPYFEEMNKI 379
Y + + G + ++EEMN +
Sbjct: 104 SYRKVRRGRVPEPCIFYEEMNAL 126
>sp|Q63HK3|ZKSC2_HUMAN Zinc finger protein with KRAB and SCAN domains 2 OS=Homo sapiens
GN=ZKSCAN2 PE=1 SV=2
Length = 967
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 299 WRPEEVKKLIKMRGE--LHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE K + + E + Q + L+ ++ L GF RTP QC++++ SL +
Sbjct: 500 WGYEETKTFLDILRETRFYEALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTKFKSLQK 559
Query: 357 KYEESKSGNSQKSWPYFEEMNKIFSDSDS 385
Y + K+G+ +S +++EM+ + + S
Sbjct: 560 SYRKVKNGHVLESCAFYKEMDALINSRAS 588
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 299 WRPEEVKKLIKMRGE--LHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE K + + E + Q ++ ++ L GF RTP QC++++ SL +
Sbjct: 343 WSYEETKTFLAILKESRFYETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQK 402
Query: 357 KYEESKSGNSQKSWPYFEEMNKIFSDS 383
Y + ++G+ + +FE+M+ + + +
Sbjct: 403 SYRKVRNGHMLEPCAFFEDMDALLNPA 429
>sp|P17040|ZSC20_HUMAN Zinc finger and SCAN domain-containing protein 20 OS=Homo sapiens
GN=ZSCAN20 PE=2 SV=3
Length = 1043
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 299 WRPEEVKKLIKMRGE--LHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE K + + E K + +++ I+ L GF RT QC+ R+ +LL+
Sbjct: 486 WGYEETKAFLAILSESPFSEKLRTCHQNSQVYRAIAERLCALGFLRTLEQCRYRFKNLLR 545
Query: 357 KYEESKSGNSQKSWPYFEEMNKIF 380
Y ++KS + + P++EE++ +
Sbjct: 546 SYRKAKSSHPPGTCPFYEELDSLM 569
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 299 WRPEEVKKLIKMRGE--LHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE K + + E K + +++ I+ L GF RT QC+ R +LL+
Sbjct: 326 WGYEETKTFLAILSESPFSEKLRTCHQNRQVYRAIAEQLRARGFLRTLEQCRYRVKNLLR 385
Query: 357 KYEESKSGNSQKSWPYFEEMNKIF--------SDSDSEAMA 389
Y ++KS + + P++EE+ + +D EA+A
Sbjct: 386 NYRKAKSSHPPGTCPFYEELEALVRARTAIRATDGPGEAVA 426
>sp|B2KFW1|ZSC20_MOUSE Zinc finger and SCAN domain-containing protein 20 OS=Mus musculus
GN=Zscan20 PE=2 SV=2
Length = 1030
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 299 WRPEEVKKLIKMRGE--LHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE K + + E K + +++ I+ L GF RT QC+ R+ +LL+
Sbjct: 479 WGFEETKVFLAILSESPFAEKLRTCHQNSQIYRAIAERLRALGFLRTLEQCRYRFKNLLR 538
Query: 357 KYEESKSGNSQKSWPYFEEMNKIF 380
Y ++KS + P++EEM+ +
Sbjct: 539 SYRKAKSSCPPGTCPFYEEMDSLM 562
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 299 WRPEEVKKLIKMRGE--LHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQ 356
W EE K + + E K Q +++ I+ L GF RT QC+ R +LL+
Sbjct: 318 WGYEETKTFLAILSESPFSEKLQTCHQNRQVYRAIAERLRARGFLRTLEQCRYRVKNLLR 377
Query: 357 KYEESKSGNSQKSWPYFEEMNKI 379
Y ++K+ + + P++EE+ +
Sbjct: 378 NYRKAKNSHPPGTCPFYEELEAL 400
>sp|Q6P1R3|MSD2_HUMAN Myb/SANT-like DNA-binding domain-containing protein 2 OS=Homo
sapiens GN=MSANTD2 PE=1 SV=1
Length = 559
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 294 VRRNKWRPEEVKKLIKMRGE---LHSKFQVVKGR----------MALWKEISTHLANEGF 340
R W P E LI + G + +++Q ++G A+++ +S LA G+
Sbjct: 99 CRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGY 158
Query: 341 NRTPSQCKSRWSSLLQKYEESKSG--NSQKSWPYFEEMNKIFSDSDSEAMATK 391
RTPSQC+ R +L + Y K +KS FE++ ++F +A +
Sbjct: 159 ERTPSQCRERIKTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDAQPCQ 211
>sp|Q6NZR2|MSD2_MOUSE Myb/SANT-like DNA-binding domain-containing protein 2 OS=Mus
musculus GN=Msantd2 PE=1 SV=1
Length = 559
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 294 VRRNKWRPEEVKKLIKMRGE---LHSKFQVVKGR----------MALWKEISTHLANEGF 340
R W P E LI + G + +++Q ++G A+++ +S LA G+
Sbjct: 99 CRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGY 158
Query: 341 NRTPSQCKSRWSSLLQKYEESKSG--NSQKSWPYFEEMNKIFSDSDSEAMATK 391
RTPSQC+ R +L + Y K +KS FE++ ++F +A +
Sbjct: 159 ERTPSQCRERIKTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDAQPCQ 211
>sp|Q5ZHX5|MSD2_CHICK Myb/SANT-like DNA-binding domain-containing protein 2 OS=Gallus
gallus GN=MSANTD2 PE=2 SV=1
Length = 556
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 294 VRRNKWRPEEVKKLIKMRGE---LHSKFQVVKGR----------MALWKEISTHLANEGF 340
R W P E LI + G + +++Q ++G A+++ +S LA G+
Sbjct: 95 CRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGY 154
Query: 341 NRTPSQCKSRWSSLLQKYEESKSG--NSQKSWPYFEEMNKIF 380
RTPSQC+ R +L + Y K +KS FE++ ++F
Sbjct: 155 ERTPSQCRERIKTLRRCYSRVKEHGVGKRKSSYTFEQLEQVF 196
>sp|Q8H181|GTL2_ARATH Trihelix transcription factor GTL2 OS=Arabidopsis thaliana
GN=At5g28300 PE=2 SV=1
Length = 619
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 19/121 (15%)
Query: 280 SLERSSSQPKPSKGVRRN----KWRPEEVKKLIKMRGEL----------HSKFQVVKGRM 325
+L+ + PKP K ++ +W +EV LI +R + + +
Sbjct: 437 TLKPKNQNPKPPKSDDKSDLGKRWPKDEVLALINIRRSISNMNDDDHKDENSLSTSSKAV 496
Query: 326 ALWKEISTHLANEGFNRTPSQCKSRWSSLLQKYEESKSGNSQ-----KSWPYFEEMNKIF 380
LW+ IS + G+ R+ +CK +W ++ + + ++K N + ++ PYF ++ ++
Sbjct: 497 PLWERISKKMLEIGYKRSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTALY 556
Query: 381 S 381
S
Sbjct: 557 S 557
>sp|Q98VG9|R1AB_FIPV Replicase polyprotein 1ab OS=Feline coronavirus (strain FIPV
WSU-79/1146) GN=rep PE=1 SV=2
Length = 6709
Score = 41.2 bits (95), Expect = 0.015, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 31/129 (24%)
Query: 183 ISQLNKTQAEGDGRQQNLQVDGI-------EVEELPEETTTTS-----SSDHGERLS-LD 229
ISQ + A D + V+ I +VE++ E+ T+T SS GE +S +D
Sbjct: 978 ISQYDLNTAADDKSDSDASVEDISLISDNEDVEQIEEDNTSTDDAEDVSSVEGETVSVVD 1037
Query: 230 SEDSDEFWKSFVAPASPINSLVKGNNVLIP--QEEQQMSELEEDGTEISDNDSL-----E 282
ED FV SLV+ NNVL P ++Q+S +E+ + ND E
Sbjct: 1038 VED-------FVEQV----SLVEENNVLTPAVNPDEQLSSVEKKDEVSAKNDPWAAAVDE 1086
Query: 283 RSSSQPKPS 291
+ + QPKPS
Sbjct: 1087 QEAEQPKPS 1095
>sp|Q5T230|UTF1_HUMAN Undifferentiated embryonic cell transcription factor 1 OS=Homo
sapiens GN=UTF1 PE=1 SV=1
Length = 341
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 325 MALWKEISTHLANEGFNRTPSQCKSRWSSLLQKYEESKSGNSQKSWPYFEEMNKIF 380
+ ++ +S LA + RTP+QC+ R+ L K+ E+ + Q P+ E++ K+
Sbjct: 92 LPTYRRVSAALAQQQVRRTPAQCRRRYKFLKDKFREA---HGQPPGPFDEQIRKLM 144
>sp|Q6BJ87|U507_DEBHA UPF0507 protein DEHA2G04334g OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DEHA2G04334g PE=3 SV=2
Length = 1235
Score = 37.4 bits (85), Expect = 0.18, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 263 QQMSELEEDGTEISDNDSLERSSSQPKPSKGVRRNK---WRPEEVKKLIKMRGELHSKFQ 319
QQ +LE + EI+D S S + +K R K + EE+KK++K+ EL +
Sbjct: 1128 QQAHQLEAEAEEIADTSSSFFSFASIIENKKARYKKLLLMKAEEIKKIMKLNAELKFDHE 1187
Query: 320 VVKGRMALWKEISTHLANEGFNRTP--SQCKSRWSSLLQKYEESKSGNSQK 368
+ ++ + + ++ N G R S C S+ ++KYE +K NS K
Sbjct: 1188 CIAAEISNFLKFKSNFINLGIKRYVRLSLCLSK----IRKYELTKLLNSCK 1234
>sp|P52551|MYBB_XENLA Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2
Length = 743
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 19/88 (21%)
Query: 272 GTEISDNDSLERSSSQPKPSKGVRRNKWRPEE---VKKLIKMRGELHSKFQVVKGRMALW 328
G ++ D + S P+P + + KW PEE +K L+K G+ W
Sbjct: 7 GDDLEDLQYQDTDSDVPEPKENRVKVKWTPEEDETLKALVKKHGQ------------GEW 54
Query: 329 KEISTHLANEGFNRTPSQCKSRWSSLLQ 356
K I+++L NRT QC+ RW +L
Sbjct: 55 KTIASNLN----NRTEQQCQHRWLRVLH 78
>sp|Q6J1H4|UTF1_MOUSE Undifferentiated embryonic cell transcription factor 1 OS=Mus
musculus GN=Utf1 PE=1 SV=2
Length = 339
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 325 MALWKEISTHLANEGFNRTPSQCKSRWSSLLQKYEESKSGNSQKSWPYFEEMNKIF 380
+ ++ +S LA + RTP+QC+ R+ L K +S+ Q S P+ ++ ++
Sbjct: 92 LPTYRRVSAALARQQVRRTPAQCRRRYKFLKDKLRDSQ---GQPSGPFDNQIRQLM 144
>sp|P34219|TOD6_YEAST Transcriptional regulatory protein TOD6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TOD6 PE=1 SV=1
Length = 525
Score = 35.0 bits (79), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 328 WKEISTHLANEGFNRTPSQCKSRWSSLLQKYEESKSGNSQKSWPYFEEMNKIF 380
WKEI+ H N RTP+ C+ RW L KSGN + + ++NK+F
Sbjct: 97 WKEIAHHFPN----RTPNACQFRWRRL-------KSGNLKSNKTAVIDINKLF 138
>sp|A1KBB8|URED_AZOSB Urease accessory protein UreD OS=Azoarcus sp. (strain BH72) GN=ureD
PE=3 SV=1
Length = 285
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 50 IASDGIIVVSMEILRPQHTDGQ----SGYSLKGKIRITTRCLWLDKGK------LLDALH 99
IA DG+ + S + G+ ++++ +IR R LWL++G+ LLD
Sbjct: 141 IAGDGVFIGSEMTCFGRSGAGERYTRGDFAMRTRIRRDGRTLWLERGRVEGGGALLD--- 197
Query: 100 KAAHAALSSCPVNCPLAHVEKTVSEVLRKVVRKYSSKRPEVIAVAMENPAAVLSDELNAR 159
+ L+ PV L KTV L + R EV A A E A +L L AR
Sbjct: 198 --SPVGLAGWPVTATLLVAAKTVDAALLEACR-------EVPAEAGEGAATLLPGLLVAR 248
Query: 160 LSGNS 164
G +
Sbjct: 249 YRGPA 253
>sp|Q43097|ACEA_PINTA Isocitrate lyase OS=Pinus taeda GN=ICL 8 PE=2 SV=1
Length = 580
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 300 RPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCKSRWSSLLQKYE 359
RP + ++++RG + + + LW+ + TH AN+ +RT S++ KY
Sbjct: 41 RPYTARDVVRLRGSMRQSYASNEMAKKLWRTLKTHQANKTASRTFGALDPVQVSMMAKYL 100
Query: 360 ES 361
+S
Sbjct: 101 DS 102
>sp|O15816|MYBB_DICDI Myb-like protein B OS=Dictyostelium discoideum GN=mybB PE=2 SV=2
Length = 711
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 14/67 (20%)
Query: 291 SKGVRR--NKWRPEEVKKLIKMRGELHSKFQVVKGRMALWKEISTHLANEGFNRTPSQCK 348
S+G+R NKW EE + LIK+ E K WK+I+T L G +T +QC
Sbjct: 432 SRGIRSPPNKWTKEESQNLIKLVTENGDK---------QWKKIATKL---GGGKTGAQCA 479
Query: 349 SRWSSLL 355
W +L
Sbjct: 480 QHWKRVL 486
>sp|Q6NZJ6|IF4G1_MOUSE Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus
GN=Eif4g1 PE=1 SV=1
Length = 1600
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 153 SDELNARLSGNSHVGFGMPALRKMVDRHPKISQLNKTQAEGDGRQQNLQVDGI--EVEEL 210
S + A+LS N V + R KI +LNK +A GD +VD EVE
Sbjct: 492 STPVPAQLSQNLEVAAATQVAVSVPKRRRKIKELNKKEAVGDLLDAFKEVDPAVPEVENQ 551
Query: 211 PEETTTTSSSDHGERLSLDSEDSDEFWKS 239
P + S G + E+++E W S
Sbjct: 552 PPTGSNPSPESEGSMVPTQPEETEETWDS 580
>sp|Q9GLP1|FA5_PIG Coagulation factor V OS=Sus scrofa GN=F5 PE=2 SV=1
Length = 2258
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 185 QLNKTQAEGDGRQQNLQVDGIEVEELPEETT----TTSSSDHGERLSLDSEDSDEFWKSF 240
++N QA+ + Q LQ+D ++++++ TT + SS + +R ++ D WKS+
Sbjct: 2142 RVNAWQAKANNNNQWLQIDLLKIKKITAITTQGCKSLSSEMYVKRYTIQYSDRGVEWKSY 2201
Query: 241 VAPASPINSLVKGNN 255
+S ++ + +GNN
Sbjct: 2202 REKSSMVDKIFEGNN 2216
>sp|D2WKD8|AT1A2_PIG Sodium/potassium-transporting ATPase subunit alpha-2 OS=Sus scrofa
GN=ATP1A2 PE=1 SV=1
Length = 1020
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 172 ALRKMVDRHPKISQL-----NKTQAEGDGRQQNLQVDGIEVEELPEETTTTSSSD--HGE 224
++RKM DR+PK++++ NK Q R+ N Q + ++ PE SS G+
Sbjct: 464 SVRKMRDRNPKVAEIPFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGK 523
Query: 225 RLSLDSEDSDEFWKSFV 241
+ LD E D F +++
Sbjct: 524 EIPLDKEMQDAFQNAYL 540
>sp|Q54TN2|MYBC_DICDI Myb-like protein C OS=Dictyostelium discoideum GN=mybC PE=1 SV=1
Length = 580
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 17/85 (20%)
Query: 276 SDNDSLE---RSSSQPKPSKGVRR--NKWRPEEVKKLIKMRGELHSKFQVVKGRMALWKE 330
SDNDS + R + S+G+R NKW EE +KLI++ E H Q WK+
Sbjct: 354 SDNDSNQKKKRERIRKSVSRGLRNPPNKWAKEESQKLIQLVHE-HGDKQ--------WKK 404
Query: 331 ISTHLANEGFNRTPSQCKSRWSSLL 355
I+ + G +T +QC W +L
Sbjct: 405 IAHQI---GGGKTGAQCAQHWKRVL 426
>sp|Q4J939|PGK_SULAC Phosphoglycerate kinase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=pgk PE=3 SV=1
Length = 415
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 29/148 (19%)
Query: 89 LDKGKLLDALHKAAHAALSSCPVNCPLAHVEK----------------TVSEVLRKVVRK 132
L+ LL + +A LS P+ P+ V + T+ ++ +
Sbjct: 256 LENKGLLSLVPRARKMLLSGAPIEIPVDFVTEQENSQTLEEPTSNLKGTIKDIGNTTIEM 315
Query: 133 YSSKRPEVIAVAMENPAAVLSDE---------LNARLSGNSHVGFGMPALRKMVDRHPKI 183
YSS E V + P V+ DE L + + G +V G + M+D++ +I
Sbjct: 316 YSSFIKESKVVVLRGPMGVIEDERFRRGSKALLTSAVEGPGYVIIGGGHMISMIDKNIQI 375
Query: 184 SQLNKTQAEGDGRQQNLQVDGIEVEELP 211
++ NK G L + G E+LP
Sbjct: 376 NE-NKVHVSTGGGALLLFLAG---EKLP 399
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,630,710
Number of Sequences: 539616
Number of extensions: 6214932
Number of successful extensions: 17061
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 16955
Number of HSP's gapped (non-prelim): 234
length of query: 391
length of database: 191,569,459
effective HSP length: 119
effective length of query: 272
effective length of database: 127,355,155
effective search space: 34640602160
effective search space used: 34640602160
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)