BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016327
(391 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 537 bits (1383), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/294 (88%), Positives = 274/294 (93%), Gaps = 3/294 (1%)
Query: 96 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEV 155
AASD QLKSAREDI+ELLK+ FCHPI+VRLGWHDAGTY+KNIEEWP+RGGAN SLRF+V
Sbjct: 1 AASDSAQLKSAREDIKELLKTKFCHPIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFDV 60
Query: 156 ELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSG 215
ELKH ANAGLVNAL L++PIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDV+
Sbjct: 61 ELKHGANAGLVNALNLLKPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVTE 120
Query: 216 PEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPET 275
PEQCPEEGRLP AGPPSPA+HLR+VFYRMGLNDKEIVALSGAHT+GRSRP+RSGWGKPET
Sbjct: 121 PEQCPEEGRLPDAGPPSPAQHLRDVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPET 180
Query: 276 KYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKY 335
KYTKDGPGAPGGQSWT QWLKFDNSYFKDIKERRDEDLLVLPTDA LFEDPSFKVYAEKY
Sbjct: 181 KYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYAEKY 240
Query: 336 AEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDD---GAAPEKFVAAKYSSGK 386
A D EAFFKDYAEAHAKLSNLGAKF P EG L+ GAAPEKFVAAKYS+GK
Sbjct: 241 AADPEAFFKDYAEAHAKLSNLGAKFGPAEGFSLEGSPAGAAPEKFVAAKYSTGK 294
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 155/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL WH AGT+DK + GG +++ EL H+AN
Sbjct: 27 VEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 82
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 83 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 139
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 140 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 188
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 189 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 241
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 242 FFADYAEAHQKLSELG 257
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 155/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL WH AGT+DK + GG +++ EL H+AN
Sbjct: 27 VEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 82
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 83 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 139
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 140 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 188
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 189 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 241
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 242 FFADYAEAHQKLSELG 257
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 155/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL WH AGT+DK + GG +++ EL H+AN
Sbjct: 15 VEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 70
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 71 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 127
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 128 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 176
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 177 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 229
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 230 FFADYAEAHQKLSELG 245
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 155/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P++++L WH AGT+DK + GG +++ EL H+AN
Sbjct: 15 VEKAKKKLRGFIAEKRCAPLMLKLAWHSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 70
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 71 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 127
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 128 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 176
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 177 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 229
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 230 FFADYAEAHQKLSELG 245
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 154/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL WH AGT+DK + GG +++ EL H+AN
Sbjct: 27 VEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 82
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 83 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 139
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + E SG+ +G
Sbjct: 140 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKEASGF---------EG 188
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 189 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 241
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 242 FFADYAEAHQKLSELG 257
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 153/256 (59%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A+ +R + C P+++RL WH AGT+D + GG +++ + EL H AN
Sbjct: 15 IEKAKRKLRGFIAEKKCAPLILRLAWHSAGTFDSKT----KTGGPFGTIKHQAELAHGAN 70
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++PIK+++ V+YAD +QLA A+E GGP++P GR D P P E
Sbjct: 71 NGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEP---PPE 127
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL+D++IVALSG HT+G + ERSG+ +G
Sbjct: 128 GRLPDATKGS--DHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGF---------EG 176
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ + LL LP+D L D F+ EKYA D++
Sbjct: 177 P-------WTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDV 229
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 230 FFADYAEAHLKLSELG 245
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 154/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++ L WH AGT+DK + GG +++ EL H+AN
Sbjct: 15 VEKAKKKLRGFIAEKRCAPLMLALAWHSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 70
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 71 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 127
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 128 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 176
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 177 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 229
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 230 FFADYAEAHQKLSELG 245
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 154/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL W AGT+DK + GG +++ EL H+AN
Sbjct: 27 VEKAKKKLRGFIAEKRCAPLMLRLAWASAGTFDKGT----KTGGPFGTIKHPAELAHSAN 82
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 83 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 139
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 140 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 188
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 189 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 241
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 242 FFADYAEAHQKLSELG 257
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 154/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL H AGT+DK + GG +++ EL H+AN
Sbjct: 27 VEKAKKKLRGFIAEKRCAPLMLRLAAHSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 82
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 83 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 139
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 140 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 188
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 189 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 241
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 242 FFADYAEAHQKLSELG 257
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 154/256 (60%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL + AGT+DK + GG +++ EL H+AN
Sbjct: 15 VEKAKKKLRGFIAEKRCAPLMLRLAAYSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 70
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 71 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 127
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 128 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 176
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 177 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 229
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 230 FFADYAEAHQKLSELG 245
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 153/256 (59%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL AGT+DK + GG +++ EL H+AN
Sbjct: 27 VEKAKKKLRGFIAEKRCAPLMLRLAAMSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 82
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 83 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 139
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 140 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 188
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 189 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 241
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 242 FFADYAEAHQKLSELG 257
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 153/256 (59%), Gaps = 26/256 (10%)
Query: 103 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAAN 162
++ A++ +R + C P+++RL AGT+DK + GG +++ EL H+AN
Sbjct: 27 VEKAKKKLRGFIAEKRCAPLMLRLAACSAGTFDKGT----KTGGPFGTIKHPAELAHSAN 82
Query: 163 AGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEE 222
GL A++L++P+K ++ ++YAD +QLA A+E GGP++P GR D P P E
Sbjct: 83 NGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEP---PPE 139
Query: 223 GRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDG 281
GRLP A S +HLR+VF + MGL D++IVALSG HT+G + ERSG+ +G
Sbjct: 140 GRLPDATKGS--DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGF---------EG 188
Query: 282 PGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEA 341
P WT L FDNSYF ++ E LL LP+D L DP F+ +KYA D++A
Sbjct: 189 P-------WTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDA 241
Query: 342 FFKDYAEAHAKLSNLG 357
FF DYAEAH KLS LG
Sbjct: 242 FFADYAEAHQKLSELG 257
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 143/278 (51%), Gaps = 40/278 (14%)
Query: 100 PDQLKSAREDIRELLKSTF-CHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVEL 157
P +++ R DI +++ P L+RL WH+A +YD + + G N AS+RF+ E
Sbjct: 6 PFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDC----FKKDGSPNSASMRFKPEC 61
Query: 158 KHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPE 217
+A N GL K ++ +K KY ++YADL+ LA+ AIE GGP IP +GRVD
Sbjct: 62 LYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGS 121
Query: 218 QCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKY 277
C +GRLP H+R VF R+G ND+E VAL GAHT G + E SG+ P
Sbjct: 122 VCGPDGRLPDGS--KTQSHVREVFRRLGFNDQETVALIGAHTCGETHIEFSGYHGP---- 175
Query: 278 TKDGPGAPGGQSWTVQWLKFDNSYFK----------------DIKERRDEDLLVLPTDAV 321
WT FDNS+F + +R L++LP+D
Sbjct: 176 ------------WTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVC 223
Query: 322 LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAK 359
L DPS++ Y E YA+D + F KD+A A KL+ LG +
Sbjct: 224 LLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELGTR 261
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 144/278 (51%), Gaps = 40/278 (14%)
Query: 100 PDQLKSAREDIRELLKSTF-CHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVEL 157
P +++ R DI +++ P L+RL WH+A +YD + + G N AS+RF+ E
Sbjct: 6 PFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDC----FKKDGSPNSASMRFKPEC 61
Query: 158 KHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPE 217
+A N GL K ++ +K KY ++YADL+ LA+ AIE GGP IP +GRVD
Sbjct: 62 LYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGS 121
Query: 218 QCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKY 277
C +GRLP H+R VF R+G ND+E VAL GAHT G E SG+ P +
Sbjct: 122 VCGPDGRLPDGS--KTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGP---W 176
Query: 278 TKDGPGAPGGQSWTVQWLKFDNSYFK----------------DIKERRDEDLLVLPTDAV 321
T D G FDNS+F + +R L++LP+D
Sbjct: 177 THDKNG-------------FDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVC 223
Query: 322 LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAK 359
L DPS++ Y E YA+D + F KD+A A KL+ LG +
Sbjct: 224 LLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELGTR 261
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 142/278 (51%), Gaps = 40/278 (14%)
Query: 100 PDQLKSAREDIRELLKSTF-CHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVEL 157
P +++ R DI +++ P L+RL WH+A +YD + + G N AS+RF+ E
Sbjct: 5 PFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDC----FKKDGSPNSASMRFKPEC 60
Query: 158 KHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPE 217
+A N GL K ++ +K KY ++YADL+ LA+ AIE GGP IP +GRVD
Sbjct: 61 LYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGS 120
Query: 218 QCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKY 277
C +GRLP H+R VF R+G ND+E VAL GAHT G E SG+ P
Sbjct: 121 VCGPDGRLPDGS--KTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGP---- 174
Query: 278 TKDGPGAPGGQSWTVQWLKFDNSYFK----------------DIKERRDEDLLVLPTDAV 321
WT FDNS+F + +R L++LP+D
Sbjct: 175 ------------WTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVC 222
Query: 322 LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAK 359
L DPS++ Y E YA+D + F KD+A A KL+ LG +
Sbjct: 223 LLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELGTR 260
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 142/266 (53%), Gaps = 41/266 (15%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDN 299
F R+ +ND+E+VALSGAHT+G++ + SG+ P WT FDN
Sbjct: 157 FFQRLNMNDREVVALSGAHTLGKTHLKNSGYEGP----------------WTANNNVFDN 200
Query: 300 SYFKDI------KERRDED---------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFK 344
S++ ++ E+ D + L LPTD L +DP + ++YA DQ+ FFK
Sbjct: 201 SFYLNLLNEDWKLEKNDANNEQWDSKSGYLQLPTDYSLIQDPKYLSIVKEYANDQDKFFK 260
Query: 345 DYAEAHAKLSNLGAKF--DPPEGIVL 368
D+++A KL G F D P +
Sbjct: 261 DFSKAFEKLLENGITFPKDAPSPFIF 286
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 139/256 (54%), Gaps = 39/256 (15%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDN 299
F R+ +ND+E+VAL GAHT+G++ + SG+ P WT FDN
Sbjct: 157 FFQRLNMNDREVVALMGAHTLGKTHLKNSGYEGP----------------WTANNNVFDN 200
Query: 300 SYFKDI------KERRDED---------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFK 344
S++ ++ E+ D + ++LPTD L +DP + ++YA DQ+ FFK
Sbjct: 201 SFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFK 260
Query: 345 DYAEAHAKLSNLGAKF 360
D+++A KL G F
Sbjct: 261 DFSKAFEKLLENGITF 276
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 139/256 (54%), Gaps = 39/256 (15%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDN 299
F R+ +ND+E+VAL GAHT+G++ + SG+ P WT FDN
Sbjct: 157 FFQRLNMNDREVVALMGAHTLGKTHLKNSGYEGP----------------WTANPNVFDN 200
Query: 300 SYFKDI------KERRDED---------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFK 344
S++ ++ E+ D + ++LPTD L +DP + ++YA DQ+ FFK
Sbjct: 201 SFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFK 260
Query: 345 DYAEAHAKLSNLGAKF 360
D+++A KL G F
Sbjct: 261 DFSKAFEKLLENGITF 276
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 138/256 (53%), Gaps = 39/256 (15%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDN 299
F R+ +ND+E+VAL GAHT+G++ + SG+ P WT FDN
Sbjct: 157 FFQRLNMNDREVVALMGAHTLGKTHLKNSGYEGP----------------WTANNNVFDN 200
Query: 300 SYFKDI------KERRDED---------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFK 344
S++ ++ E+ D + L LPTD L +DP + ++YA DQ+ FFK
Sbjct: 201 SFYLNLLNEDWKLEKNDANNEQWDSKSGYLQLPTDYSLIQDPKYLSIVKEYANDQDKFFK 260
Query: 345 DYAEAHAKLSNLGAKF 360
D+++A KL G F
Sbjct: 261 DFSKAFEKLLENGITF 276
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 142/261 (54%), Gaps = 27/261 (10%)
Query: 119 CHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDK 178
C P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI +
Sbjct: 35 CGPVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKE 91
Query: 179 YSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHL 237
+ ++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++
Sbjct: 92 FPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYV 147
Query: 238 RNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLK 296
R F R+ +ND+E+VAL GAH +G++ +RSG+ +GP +T + +L
Sbjct: 148 RTFFQRLNMNDREVVALMGAHALGKTHLKRSGY---------EGPFGAANNVFTNEFYLN 198
Query: 297 FDNSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEA 349
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 199 LLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKA 258
Query: 350 HAKLSNLGAKF--DPPEGIVL 368
KL G F D P +
Sbjct: 259 FEKLLENGITFPKDAPSPFIF 279
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 139/255 (54%), Gaps = 19/255 (7%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ +RSG WG +T + ++W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNENWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF--DPPEGIVL 368
G F D P +
Sbjct: 272 NGITFPKDAPSPFIF 286
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 138/256 (53%), Gaps = 39/256 (15%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDN 299
F R+ +ND+E+VAL GAHT+G++ + SG+ P W FDN
Sbjct: 157 FFQRLNMNDREVVALMGAHTLGKTHLKNSGYEGP----------------WDATNNVFDN 200
Query: 300 SYFKDI------KERRDED---------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFK 344
S++ ++ E+ D + ++LPTD L +DP + ++YA DQ+ FFK
Sbjct: 201 SFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFK 260
Query: 345 DYAEAHAKLSNLGAKF 360
D+++A KL G F
Sbjct: 261 DFSKAFEKLLENGITF 276
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 136/245 (55%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ +RSG WG +T + ++W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNENWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ +RSG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDADYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ +RSG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 NGITF 273
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 134/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T +G + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEGYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF 360
G F
Sbjct: 272 NGITF 276
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 138/255 (54%), Gaps = 19/255 (7%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + ++W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNENWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF--DPPEGIVL 368
G F D P +
Sbjct: 272 NGITFPKDAPSPFIF 286
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 137/255 (53%), Gaps = 19/255 (7%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF--DPPEGIVL 368
G F D P +
Sbjct: 272 NGITFPKDAPSPFIF 286
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 43 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 99
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 100 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 155
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 156 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 215
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 216 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 270
Query: 356 LGAKF 360
G F
Sbjct: 271 NGITF 275
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF 360
G F
Sbjct: 272 NGITF 276
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 137/255 (53%), Gaps = 19/255 (7%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRAGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNCFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF--DPPEGIVL 368
G F D P +
Sbjct: 272 NGITFPKDAPSPFIF 286
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 138/249 (55%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 43 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 99
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 100 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 155
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ +RSG+ +GP +T + +L
Sbjct: 156 FFQRLNMNDREVVALMGAHALGKTHLKRSGY---------EGPFGAANNVFTNEFYLNLL 206
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 207 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDRFFKDFSKAFE 266
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 267 KLLENGITF 275
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF 360
G F
Sbjct: 272 DGITF 276
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 137/255 (53%), Gaps = 19/255 (7%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 103 WISSGDLFSLGGVTAVQEWQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF--DPPEGIVL 368
G F D P +
Sbjct: 274 NGITFPKDAPSPFIF 288
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ +RSG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKRSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPT L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTXYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF 360
G F
Sbjct: 272 NGITF 276
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 137/249 (55%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GPG +T + +L
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPGGAANNVFTNEFYLNLL 209
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 210 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 269
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 270 KLLENGITF 278
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 137/249 (55%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GPG +T + +L
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPGGAANNVFTNEFYLNLL 207
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 208 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 267
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 268 KLLENGITF 276
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 136/255 (53%), Gaps = 19/255 (7%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPWNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF--DPPEGIVL 368
G F D P +
Sbjct: 274 NGITFPKDAPSPFIF 288
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 137/249 (55%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GPG +T + +L
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPGGAANNVFTNEFYLNLL 207
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 208 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 267
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 268 KLLEDGITF 276
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 137/249 (55%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GPG +T + +L
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPGGAANNVFTNEFYLNLL 204
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 205 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 264
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 265 KLLEDGITF 273
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 137/249 (55%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 42 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 98
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 99 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 154
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GPG +T + +L
Sbjct: 155 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPGGAANNVFTNEFYLNLL 205
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 206 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 265
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 266 KLLEDGITF 274
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEKYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 NGITF 273
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALKGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 NGITF 273
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 47 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 103
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 104 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 159
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 160 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 219
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 220 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 274
Query: 356 LGAKF 360
G F
Sbjct: 275 NGITF 279
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYIMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL W+ +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWYTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A+++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDAD--KDADYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF 360
G F
Sbjct: 272 NGITF 276
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEYYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 NGITF 273
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 DGITF 273
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF 360
G F
Sbjct: 272 NGITF 276
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 DGITF 273
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRAGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGCANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 137/249 (55%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GPG +T + +L
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPGGAANNVFTNEFYLNLL 207
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPT+ L +DP + ++YA DQ+ FFKD+++A
Sbjct: 208 NEDWKLEKNDANNEQWDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 267
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 268 KLLENGITF 276
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LV+L WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVKLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A ++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDM--DKDAGYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF 360
G F
Sbjct: 272 NGITF 276
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPT+ L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTNYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + + LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMHLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 NGITF 273
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GP +T + +L
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPQGAANNVFTNEFYLNLL 209
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 210 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 269
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 270 KLLENGITF 278
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GP +T + +L
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPFGAANNVFTNEFYLNLL 209
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 210 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 269
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 270 KLLENGITF 278
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 47 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 103
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 104 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 159
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 160 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 219
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPT+ L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 220 DANNEQWD-----SKSGYMMLPTEYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 274
Query: 356 LGAKF 360
G F
Sbjct: 275 NGITF 279
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 44 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 100
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A ++R
Sbjct: 101 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDY--DKDAGYVRT 156
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 157 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 216
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 217 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 271
Query: 356 LGAKF 360
G F
Sbjct: 272 NGITF 276
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GP +T + +L
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPQGAANNVFTNEFYLNLL 204
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 205 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 264
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 265 KLLEDGITF 273
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 133/243 (54%), Gaps = 15/243 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 47 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 103
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 104 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 159
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGW--GKPETKYTKDGPGAPGGQSWTVQWLKF 297
F R+ +ND+E+VAL GAH +G++ + SG+ G +T + + W ++
Sbjct: 160 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDA 219
Query: 298 DNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 357
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL G
Sbjct: 220 NNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENG 274
Query: 358 AKF 360
F
Sbjct: 275 ITF 277
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 25/249 (10%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQ-WLKFD 298
F R+ +ND+E+VAL GAH +G++ + SG+ +GP +T + +L
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGY---------EGPYGAANNVFTNEFYLNLL 204
Query: 299 NSYFKDIKERRDED-------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHA 351
N +K K + + ++LPTD L +DP + ++YA DQ+ FFKD+++A
Sbjct: 205 NEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFE 264
Query: 352 KLSNLGAKF 360
KL G F
Sbjct: 265 KLLEDGITF 273
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 133/243 (54%), Gaps = 15/243 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 42 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 98
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 99 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 154
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGW--GKPETKYTKDGPGAPGGQSWTVQWLKF 297
F R+ +ND+E+VAL GAH +G++ + SG+ G +T + + W ++
Sbjct: 155 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDA 214
Query: 298 DNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 357
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL G
Sbjct: 215 NNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENG 269
Query: 358 AKF 360
F
Sbjct: 270 ITF 272
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LV L WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVLLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 133/243 (54%), Gaps = 15/243 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSGW--GKPETKYTKDGPGAPGGQSWTVQWLKF 297
F R+ +ND+E+VAL GAH +G++ + SG+ G +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDA 213
Query: 298 DNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 357
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL G
Sbjct: 214 NNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENG 268
Query: 358 AKF 360
F
Sbjct: 269 ITF 271
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PELVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTELKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 NGITF 273
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LV L WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVALAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 NGITF 273
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 47 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 103
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 104 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 159
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 160 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 219
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPT L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 220 DANNEQWD-----SKSGYMMLPTAYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 274
Query: 356 LGAKF 360
G F
Sbjct: 275 NGITF 279
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL +H +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAFHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 131/243 (53%), Gaps = 17/243 (6%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGV 182
LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++ +
Sbjct: 46 LVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI 102
Query: 183 TYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRNVF 241
+ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R F
Sbjct: 103 SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRTFF 158
Query: 242 YRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWLKF 297
R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 QRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDA 218
Query: 298 DNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 357
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL G
Sbjct: 219 NNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENG 273
Query: 358 AKF 360
F
Sbjct: 274 ITF 276
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL W +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 46 PVLVRLAWLISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 102
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 103 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 158
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GAH +G++ + SG WG +T + + W ++
Sbjct: 159 FFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 218
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 219 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 273
Query: 356 LGAKF 360
G F
Sbjct: 274 NGITF 278
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
Ph 6, 100k
pdb|1DSG|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 5, Room Temperature.
pdb|1DSO|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 6, Room Temperature.
pdb|1DSP|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 7, Room Temperature
Length = 292
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 42 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 98
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 99 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 154
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GA +G++ + SG WG +T + + W ++
Sbjct: 155 FFQRLNMNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 214
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 215 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 269
Query: 356 LGAKF 360
G F
Sbjct: 270 NGITF 274
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
pdb|1CCG|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
Length = 291
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ E +NAGL N K ++PI ++
Sbjct: 41 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP 97
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 98 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 153
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GA +G++ + SG WG +T + + W ++
Sbjct: 154 FFQRLNMNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 213
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 214 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 268
Query: 356 LGAKF 360
G F
Sbjct: 269 NGITF 273
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
With Phosphate Bound, Ph 6, 100k
Length = 292
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 121 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS 180
P+LVRL WH +GT+DK+ GG + RF+ + +NAGL N K ++PI ++
Sbjct: 42 PVLVRLAWHISGTWDKHDNTGGSYGG---TYRFKKQFNDPSNAGLQNGFKFLEPIHKEFP 98
Query: 181 GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-CPEEGRLPAAGPPSPAEHLRN 239
++ DLF L TA++E GPKIP + GRVD PE P+ GRLP A A ++R
Sbjct: 99 WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT--PEDTTPDNGRLPDA--DKDAGYVRT 154
Query: 240 VFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWTVQWL 295
F R+ +ND+E+VAL GA +G++ + SG WG +T + + W ++
Sbjct: 155 FFQRLNMNDREVVALMGAGALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKN 214
Query: 296 KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+N + ++LPTD L +DP + ++YA DQ+ FFKD+++A KL
Sbjct: 215 DANNEQWD-----SKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLE 269
Query: 356 LGAKF 360
G F
Sbjct: 270 NGITF 274
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 124/296 (41%), Gaps = 61/296 (20%)
Query: 100 PDQLKSAREDIRELLKS-TFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFE--VE 156
P+ R I++ L+S T L+RL +HD G +AS+ +
Sbjct: 13 PNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFV-----------NGCDASILLDDTGS 61
Query: 157 LKHAANAG-LVNA---LKLIQPIKDKYSG-----VTYADLFQLASATAIEEAGGPKIPMK 207
++ NAG VN+ ++ IK V+ +D+ LAS ++ AGGP +
Sbjct: 62 IQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121
Query: 208 YGRVDVSGPEQCPEEGRLPAAGP--PSPAEHLRNV---FYRMGLNDKEIVALSGAHTVGR 262
GR D L A PSP E L N+ F +GLN ++VALSGAHT GR
Sbjct: 122 LGRRD-------SLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGR 174
Query: 263 SRP--------ERSGWGKPE-----TKYTKDGPGAP-GGQSWTVQWL------KFDNSYF 302
+R SG G P+ T + P G + T+ L FDN+YF
Sbjct: 175 ARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYF 234
Query: 303 KDIKERRDEDLLVLPTDAVLFEDPSFKVYA--EKYAEDQEAFFKDYAEAHAKLSNL 356
+++ +L +D LF A +A +Q FF+ +A++ + N+
Sbjct: 235 ANLQSNDG----LLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNI 286
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 108/270 (40%), Gaps = 56/270 (20%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASLRFE-----VELKHAA-NAGLVNALKLIQPIK 176
L+RL +HD G +AS+ + + K+A NA ++ IK
Sbjct: 38 LIRLHFHDCFVL-----------GCDASILLDNSGSIISEKNAGPNANSARGFNVVDNIK 86
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ D+ LAS ++ +GGP + GR D Q +P
Sbjct: 87 TALENACPGVVSCTDVLALASQASVSLSGGPSWTVDLGRRDTLTANQAGANSSIP----- 141
Query: 232 SPAEHLRNV---FYRMGLNDKEIVALSGAHTVGRSRP--------ERSGWGKPE------ 274
SP + L N+ F +GLN ++VALSGAHT GR+ SG G P+
Sbjct: 142 SPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGVFSNRLFNFSGKGNPDPTLNTT 201
Query: 275 --TKYTKDGPGAPGGQSWTVQWLK----FDNSYFKDIKERRDEDLLVLPTDAVLFEDPSF 328
+ + P G T L FDN+YF +++ +L +D LF
Sbjct: 202 LLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQSNNG----LLQSDQELFSTTGS 257
Query: 329 KVYA--EKYAEDQEAFFKDYAEAHAKLSNL 356
A +A +Q FF+ +A++ + N+
Sbjct: 258 ATIAIVTSFASNQTLFFQAFAQSMINMGNI 287
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 121/294 (41%), Gaps = 51/294 (17%)
Query: 96 AASDPDQLKSAREDIRELLKSTF-CHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFE 154
A S P+ ++ R+ + LK+ L+RL +HD G +ASL +
Sbjct: 8 AKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFV-----------NGCDASLLLD 56
Query: 155 ---VELKHAANAGLVNALKLIQPIKDKYSG-----VTYADLFQLASATAIEEAGGPKIPM 206
E N ++I IK V+ AD+ LA+ ++ +GGP +
Sbjct: 57 GADSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRV 116
Query: 207 KYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRP- 265
GR D Q LP+ P P + + F + LN ++VALSGAHT G+++
Sbjct: 117 ALGRKDGLVANQ-NSANNLPS--PFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCA 173
Query: 266 -------ERSGWGKP----ETKYTKDGPGAP--GGQSWTVQWL------KFDNSYFKDIK 306
+G G P ET + GG S L FDN+YFK++
Sbjct: 174 VFSNRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLL 233
Query: 307 ERRDEDLLVLPTDAVLFED----PSFKVYAEKYAEDQEAFFKDYAEAHAKLSNL 356
E + +L +D +LF + K E Y+ Q FF+D+ A ++ N+
Sbjct: 234 EGKG----LLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNI 283
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From
Synechococcus Pcc 7942
Length = 720
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 139/358 (38%), Gaps = 99/358 (27%)
Query: 94 KCAASDPDQLKSAREDIRELLKSTFCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASL 151
K A+ L++ D ++ + + H +++RL WH AGTY I + R G +
Sbjct: 57 KLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTY--RIAD-GRGGAGTGNQ 113
Query: 152 RFEVELKHAANAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGR 210
RF N L A +L+ PIK KY +++ADL A A E G +GR
Sbjct: 114 RFAPLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMGLKTFGFAFGR 173
Query: 211 VDVSGPEQ----CPEEGRLPAA---------------------------------GPPSP 233
D+ PE+ PE+ P + G P P
Sbjct: 174 EDIWHPEKDIYWGPEKEWFPPSTNPNSRYTGDRELENPLAAVTMGLIYVNPEGVDGNPDP 233
Query: 234 ---AEHLRNVFYRMGLNDKEIVALS-GAHTVGRSR-----------PERS-------GW- 270
A +R F RM +ND+E VAL+ G HTVG+ PE + GW
Sbjct: 234 LKTAHDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGNAALLGPEPEGADVEDQGLGWI 293
Query: 271 GKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFK--------DIKER------------RD 310
K ++ ++ + +WT ++DN YF ++K+ R+
Sbjct: 294 NKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNPAGAWQWEPINPRE 353
Query: 311 ED-------------LLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
ED L++ D + DP ++ +E++ +D F +A A KL++
Sbjct: 354 EDLPVDVEDPSIRRNLVMTDADMAMKMDPEYRKISERFYQDPAYFADVFARAWFKLTH 411
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLH|B Chain B, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLI|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLI|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLJ|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
pdb|3VLJ|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
Length = 737
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 139/360 (38%), Gaps = 103/360 (28%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASLRF 153
L++ + D+ EL+ S+ + H P+ +R+ WH AGTY R G A RF
Sbjct: 61 LEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADG---RGGAAGGRQRF 117
Query: 154 EVELKHAANAGLVNALKLIQPIKDKY-SGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 212
NA L A +L+ PIK KY +++ADL LA AIE G GR D
Sbjct: 118 APINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 177
Query: 213 V--------SGP-------EQCPEEGRLPAA-----------------GPPSP---AEHL 237
GP E+ E G + G P P A+++
Sbjct: 178 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNI 237
Query: 238 RNVFYRMGLNDKEIVAL-SGAHTVGR----SRPERSGWGKPETK--------YTKDGPGA 284
R F RM +NDKE AL +G HT G+ PE + +PE + +
Sbjct: 238 RQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNS 297
Query: 285 PGGQS--------WTVQWLKFDNSYFKDIKER----------------RDEDL------- 313
GG+ WT ++D Y ++ + + E+L
Sbjct: 298 KGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKSEELKNSVPDA 357
Query: 314 ---------LVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPE 364
++L TD L DP ++ E + E+ F ++A+A KL++L PPE
Sbjct: 358 HDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTHL--DMGPPE 415
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
pdb|3UW8|B Chain B, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
Length = 737
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 138/360 (38%), Gaps = 103/360 (28%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASLRF 153
L++ + D+ EL+ S+ + H P+ +R+ WH AGTY R G A RF
Sbjct: 61 LEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADG---RGGAAGGRQRF 117
Query: 154 EVELKHAANAGLVNALKLIQPIKDKY-SGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 212
NA L A +L+ PIK KY +++ADL LA AIE G GR D
Sbjct: 118 APINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 177
Query: 213 V--------SGP-------EQCPEEGRLPAA-----------------GPPSP---AEHL 237
GP E+ E G + G P P A+++
Sbjct: 178 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNI 237
Query: 238 RNVFYRMGLNDKEIVAL-SGAHTVGR----SRPERSGWGKPETK--------YTKDGPGA 284
R F RM +NDKE AL +G HT G+ PE + +PE + +
Sbjct: 238 RQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNS 297
Query: 285 PGGQS--------WTVQWLKFDNSYFKDIKER----------------RDEDL------- 313
GG+ WT ++D Y ++ + + E+L
Sbjct: 298 KGGEMITTGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKSEELKNSVPDA 357
Query: 314 ---------LVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPE 364
++L TD L DP ++ E + E+ F ++A+A KL++ PPE
Sbjct: 358 HDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTH--RDMGPPE 415
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
pdb|1ITK|B Chain B, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
Length = 731
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 138/360 (38%), Gaps = 103/360 (28%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASLRF 153
L++ + D+ EL+ S+ + H P+ +R+ WH AGTY R G A RF
Sbjct: 61 LEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADG---RGGAAGGRQRF 117
Query: 154 EVELKHAANAGLVNALKLIQPIKDKY-SGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 212
NA L A +L+ PIK KY +++ADL LA AIE G GR D
Sbjct: 118 APINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 177
Query: 213 V--------SGP-------EQCPEEGRLPAA-----------------GPPSP---AEHL 237
GP E+ E G + G P P A+++
Sbjct: 178 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNI 237
Query: 238 RNVFYRMGLNDKEIVAL-SGAHTVGR----SRPERSGWGKPETK--------YTKDGPGA 284
R F RM +NDKE AL +G HT G+ PE + +PE + +
Sbjct: 238 RQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNS 297
Query: 285 PGGQS--------WTVQWLKFDNSYFKDIKER----------------RDEDL------- 313
GG+ WT ++D Y ++ + + E+L
Sbjct: 298 KGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKSEELKNSVPDA 357
Query: 314 ---------LVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPE 364
++L TD L DP ++ E + E+ F ++A+A KL++ PPE
Sbjct: 358 HDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTH--RDMGPPE 415
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLK|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLL|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
pdb|3VLL|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
Length = 737
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 138/360 (38%), Gaps = 103/360 (28%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASLRF 153
L++ + D+ EL+ S+ + H P+ +R+ WH AGTY R G A RF
Sbjct: 61 LEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADG---RGGAAGGRQRF 117
Query: 154 EVELKHAANAGLVNALKLIQPIKDKY-SGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 212
NA L A +L+ PIK KY +++ADL LA AIE G GR D
Sbjct: 118 APINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 177
Query: 213 V--------SGP-------EQCPEEGRLPAA-----------------GPPSP---AEHL 237
GP E+ E G + G P P A+++
Sbjct: 178 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNI 237
Query: 238 RNVFYRMGLNDKEIVAL-SGAHTVGR----SRPERSGWGKPETK--------YTKDGPGA 284
R F RM +NDKE AL +G HT G+ PE + +PE + +
Sbjct: 238 RQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNS 297
Query: 285 PGGQS--------WTVQWLKFDNSYFKDIKER----------------RDEDL------- 313
GG+ WT ++D Y ++ + + E+L
Sbjct: 298 KGGEMITAGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKSEELKNSVPDA 357
Query: 314 ---------LVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPE 364
++L TD L DP ++ E + E+ F ++A+A KL++ PPE
Sbjct: 358 HDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTH--RDMGPPE 415
>pdb|3RRW|A Chain A, Crystal Structure Of The Tl29 Protein From Arabidopsis
Thaliana
pdb|3RRW|B Chain B, Crystal Structure Of The Tl29 Protein From Arabidopsis
Thaliana
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 46/184 (25%)
Query: 110 IRELLKSTF-----CHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAG 164
I+ LL +T P L++L +DA TYDK + GGAN S+RF EL A N G
Sbjct: 17 IKILLSTTIKAKPELVPSLLKLALNDAXTYDKA----TKSGGANGSIRFSSELSRAENEG 72
Query: 165 LVNALKLIQPIKDKYSG------VTYADLFQLAS---------ATAIEEAGGPK------ 203
L + L LI+ +K + ++YAD+ QLA A+AI + GG +
Sbjct: 73 LSDGLSLIEEVKKEIDSISKGGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLL 132
Query: 204 ------------IPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEI 251
+GR D + + EGR+P G + E ++ F +GL +++
Sbjct: 133 YTAYGSAGQWGLFDRNFGRSDAT---EADPEGRVPQWGKATVQEX-KDKFIAVGLGPRQL 188
Query: 252 VALS 255
S
Sbjct: 189 AVXS 192
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 55/212 (25%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ WH AGTY RGGA R
Sbjct: 43 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTA----DGRGGAGEGQQR 98
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 99 FAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 158
Query: 212 DVSGPEQC---PEEGRLPAAGPP------------------------------------S 232
D PE E+ L +G P +
Sbjct: 159 DTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVA 218
Query: 233 PAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 263
A +R+ F RM +ND+E VAL +G HT G++
Sbjct: 219 AARDIRDTFARMAMNDEETVALIAGGHTFGKT 250
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 132/353 (37%), Gaps = 104/353 (29%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ WH AGTY RGGA R
Sbjct: 77 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTA----DGRGGAGEGQQR 132
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 133 FAPLNSWPENANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 192
Query: 212 DVSGPEQC---PEEGRLPAAGPP------------------------------------S 232
D PE E+ L +G P +
Sbjct: 193 DTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVA 252
Query: 233 PAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR-----------PERSG---WGKPETKY 277
A +R+ F RM +ND+E VAL +G HT G++ PE +G G
Sbjct: 253 AARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWKSA 312
Query: 278 TKDGPGAPGGQS-----WTVQWLKFDNSYFKDIKERRDE----------------DLLV- 315
+ G GA S WT ++ +++F+++ E D ++
Sbjct: 313 YRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKGADAVIP 372
Query: 316 -------------LPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
L TD L DP+++ + ++ E+ E F +A A KL++
Sbjct: 373 DAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTH 425
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 132/353 (37%), Gaps = 104/353 (29%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ WH AGTY RGGA R
Sbjct: 77 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTA----DGRGGAGEGQQR 132
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 133 FAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 192
Query: 212 DVSGPEQC---PEEGRLPAAGPP------------------------------------S 232
D PE E+ L +G P +
Sbjct: 193 DTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVA 252
Query: 233 PAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR-----------PERSG---WGKPETKY 277
A +R+ F RM +ND+E VAL +G HT G++ PE +G G
Sbjct: 253 AARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWKSA 312
Query: 278 TKDGPGAPGGQS-----WTVQWLKFDNSYFKDIKERRDE----------------DLLV- 315
+ G GA S WT ++ +++F+++ E D ++
Sbjct: 313 YRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKGADAVIP 372
Query: 316 -------------LPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
L TD L DP+++ + ++ E+ E F +A A KL++
Sbjct: 373 DAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTH 425
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 55/212 (25%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ WH AGTY RGGA R
Sbjct: 77 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTA----DGRGGAGEGQQR 132
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 133 FAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 192
Query: 212 DVSGPEQC---PEEGRLPAAGPP------------------------------------S 232
D PE E+ L +G P +
Sbjct: 193 DTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVA 252
Query: 233 PAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 263
A +R+ F RM +ND+E VAL +G HT G++
Sbjct: 253 AARDIRDTFARMAMNDEETVALIAGGHTFGKT 284
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 55/212 (25%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ WH AGTY RGGA R
Sbjct: 77 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTA----DGRGGAGEGQQR 132
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 133 FAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 192
Query: 212 DVSGPEQC---PEEGRLPAAGPP------------------------------------S 232
D PE E+ L +G P +
Sbjct: 193 DTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVA 252
Query: 233 PAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRS 263
A +R+ F RM +ND+E VAL +G HT G++
Sbjct: 253 AARDIRDTFARMAMNDEETVALIAGGHTFGKT 284
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLM|B Chain B, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
Length = 737
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 137/360 (38%), Gaps = 103/360 (28%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGANASLRF 153
L++ + D+ EL+ S+ + H P+ +R+ WH AGTY R G A RF
Sbjct: 61 LEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADG---RGGAAGGRQRF 117
Query: 154 EVELKHAANAGLVNALKLIQPIKDKY-SGVTYADLFQLASATAIEEAGGPKIPMKYGRVD 212
NA L A +L+ PIK KY +++ADL LA AIE G GR D
Sbjct: 118 APINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 177
Query: 213 V--------SGP-------EQCPEEGRLPAA-----------------GPPSP---AEHL 237
GP E+ E G + G P P A+++
Sbjct: 178 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNI 237
Query: 238 RNVFYRMGLNDKEIVAL-SGAHTVGR----SRPERSGWGKPETK--------YTKDGPGA 284
R F R +NDKE AL +G HT G+ PE + +PE + +
Sbjct: 238 RQTFDRAAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNS 297
Query: 285 PGGQS--------WTVQWLKFDNSYFKDIKER----------------RDEDL------- 313
GG+ WT ++D Y ++ + + E+L
Sbjct: 298 KGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKSEELKNSVPDA 357
Query: 314 ---------LVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPE 364
++L TD L DP ++ E + E+ F ++A+A KL++ PPE
Sbjct: 358 HDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTH--RDMGPPE 415
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 41/258 (15%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
L+RL +HD G +AS+ F E NA + ++I IK
Sbjct: 36 LLRLHFHDCFVQ-----------GCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIK 84
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
+ V+ AD+ +A+ ++ GG + GR D + LPA P
Sbjct: 85 SQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPA--PF 142
Query: 232 SPAEHLRNVFYRMGLNDKEIVALSGAHTVGRS-----RPERSGWGKPETKYTK----DGP 282
L + F G KE+V LSGAHT+G++ R + Y K + P
Sbjct: 143 FNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCP 202
Query: 283 GAPGGQSWT----VQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAED 338
G + + KFDN+Y+ +++ ++ +L +D LF S Y+ +
Sbjct: 203 SVGGDTNLSPFDVTTPNKFDNAYYINLRNKKG----LLHSDQQLFNGVSTDSQVTAYSNN 258
Query: 339 QEAFFKDYAEAHAKLSNL 356
F D+ A K+ NL
Sbjct: 259 AATFNTDFGNAMIKMGNL 276
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 132/355 (37%), Gaps = 108/355 (30%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ WH AGTY RGGA R
Sbjct: 77 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTA----DGRGGAGEGQQR 132
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 133 FAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 192
Query: 212 DV-------------------------SGPEQCPEEGRLPAA-------------GPPSP 233
D SG Q E L A G P P
Sbjct: 193 DTWEPADVYWGSEKIWLELSGGPNSRYSGDRQL--ENPLAAVQMGLIYVNPEGPDGNPDP 250
Query: 234 ---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR-----------PERSG---WGKPET 275
A +R+ F RM +ND+E VAL +G HT G++ PE +G G
Sbjct: 251 VAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWK 310
Query: 276 KYTKDGPGAPGGQS-----WTVQWLKFDNSYFKDIKERRDE----------------DLL 314
+ G GA S WT ++ +++F+++ E D +
Sbjct: 311 SAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKGADAV 370
Query: 315 V--------------LPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+ L TD L DP+++ + ++ E+ E F +A A KL++
Sbjct: 371 IPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTH 425
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 131/353 (37%), Gaps = 104/353 (29%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ H AGTY RGGA R
Sbjct: 77 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGTYRTA----DGRGGAGEGQQR 132
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 133 FAPLNSWPENANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 192
Query: 212 DVSGPEQC---PEEGRLPAAGPP------------------------------------S 232
D PE E+ L +G P +
Sbjct: 193 DTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVA 252
Query: 233 PAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR-----------PERSG---WGKPETKY 277
A +R+ F RM +ND+E VAL +G HT G++ PE +G G
Sbjct: 253 AARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWKSA 312
Query: 278 TKDGPGAPGGQS-----WTVQWLKFDNSYFKDIKERRDE----------------DLLV- 315
+ G GA S WT ++ +++F+++ E D ++
Sbjct: 313 YRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKGADAVIP 372
Query: 316 -------------LPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
L TD L DP+++ + ++ E+ E F +A A KL++
Sbjct: 373 DAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTH 425
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 131/353 (37%), Gaps = 104/353 (29%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ H AGTY RGGA R
Sbjct: 77 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGTYRTA----DGRGGAGEGQQR 132
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 133 FAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 192
Query: 212 DVSGPEQC---PEEGRLPAAGPP------------------------------------S 232
D PE E+ L +G P +
Sbjct: 193 DTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVA 252
Query: 233 PAEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR-----------PERSG---WGKPETKY 277
A +R+ F RM +ND+E VAL +G HT G++ PE +G G
Sbjct: 253 AARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWKSA 312
Query: 278 TKDGPGAPGGQS-----WTVQWLKFDNSYFKDIKERRDE----------------DLLV- 315
+ G GA S WT ++ +++F+++ E D ++
Sbjct: 313 YRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKGADAVIP 372
Query: 316 -------------LPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
L TD L DP+++ + ++ E+ E F +A A KL++
Sbjct: 373 DAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTH 425
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 100/263 (38%), Gaps = 38/263 (14%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSG- 181
L+RL +HD ++ N + E E N + L ++ IK
Sbjct: 36 LMRLHFHDCF-----VQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVVNDIKTAVENS 90
Query: 182 ----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHL 237
V+ AD+ +A+ A GGP P+ GR D + LPA P L
Sbjct: 91 CPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPA--PFFNLTQL 148
Query: 238 RNVFYRMGLNDKEIVALSGAHTVGRSRPER--------SGWGKPE----TKYTK----DG 281
+ F GLN ++V LSG HT GR+R S G P+ T Y +
Sbjct: 149 KASFAVQGLNTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARC 208
Query: 282 PGAPGGQSWTVQWL----KFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKV--YAEKY 335
P G + T L +FDN Y+ ++ + +D LF P +
Sbjct: 209 PQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNGLLQ----SDQELFSTPGADTIPIVNSF 264
Query: 336 AEDQEAFFKDYAEAHAKLSNLGA 358
+ +Q FF ++ + K+ N+G
Sbjct: 265 SSNQNTFFSNFRVSMIKMGNIGV 287
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 106/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 37 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 85
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LP GP
Sbjct: 86 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLP--GPF 143
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VALSG HT G+++ S G P+ T Y
Sbjct: 144 FTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 203
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKV 330
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 204 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 259
Query: 331 ---YAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 260 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 107/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 37 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 85
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LPA P
Sbjct: 86 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PF 143
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVG----RSRPER----SGWGKPE----TKYT 278
L++ F +GLN ++VALSG HT G RS +R S G P+ T Y
Sbjct: 144 FTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRSIMDRLYNFSNTGLPDPTLNTTYL 203
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK- 329
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 204 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 259
Query: 330 --VYAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 260 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 131/355 (36%), Gaps = 108/355 (30%)
Query: 103 LKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLR 152
L + + D+ L+ ++ F H + +R+ H AGTY RGGA R
Sbjct: 77 LAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGTYRTA----DGRGGAGEGQQR 132
Query: 153 FEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211
F NA L A +L+ PIK KY +++ADL L A+E G GR
Sbjct: 133 FAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRA 192
Query: 212 DV-------------------------SGPEQCPEEGRLPAA-------------GPPSP 233
D SG Q E L A G P P
Sbjct: 193 DTWEPADVYWGSEKIWLELSGGPNSRYSGDRQL--ENPLAAVQMGLIYVNPEGPDGNPDP 250
Query: 234 ---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR-----------PERSG---WGKPET 275
A +R+ F RM +ND+E VAL +G HT G++ PE +G G
Sbjct: 251 VAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWK 310
Query: 276 KYTKDGPGAPGGQS-----WTVQWLKFDNSYFKDIKERRDE----------------DLL 314
+ G GA S WT ++ +++F+++ E D +
Sbjct: 311 SAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKGADAV 370
Query: 315 V--------------LPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355
+ L TD L DP+++ + ++ E+ E F +A A KL++
Sbjct: 371 IPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTH 425
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 106/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 36 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 84
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LPA P
Sbjct: 85 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PF 142
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VALSG HT G+++ S G P+ T Y
Sbjct: 143 FTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 202
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKV 330
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 203 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 258
Query: 331 ---YAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 259 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 106/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 36 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 84
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LPA P
Sbjct: 85 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PF 142
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VALSG HT G+++ S G P+ T Y
Sbjct: 143 FTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 202
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKV 330
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 203 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 258
Query: 331 ---YAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 259 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 106/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 36 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 84
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LPA P
Sbjct: 85 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PF 142
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VALSG HT G+++ S G P+ T Y
Sbjct: 143 FTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 202
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK- 329
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 203 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 258
Query: 330 --VYAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 259 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 106/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 37 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 85
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LPA P
Sbjct: 86 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PF 143
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VALSG HT G+++ S G P+ T Y
Sbjct: 144 FTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 203
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK- 329
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 204 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 259
Query: 330 --VYAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 260 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 30/199 (15%)
Query: 182 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVF 241
V+ ADL +A+ ++ AGGP + GR D LPA P L++ F
Sbjct: 96 VSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PFFTLPQLKDSF 153
Query: 242 YRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYTKDGPGAP--- 285
+GLN ++VALSG HT G+++ S G P+ T Y + G
Sbjct: 154 RNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLN 213
Query: 286 GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK---VYAEKYAE 337
G S V + FDN Y+ +++E++ ++ +D LF P+ +A
Sbjct: 214 GNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATDTIPLVRSFAN 269
Query: 338 DQEAFFKDYAEAHAKLSNL 356
+ FF + EA ++ N+
Sbjct: 270 STQTFFNAFVEAMDRMGNI 288
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 30/199 (15%)
Query: 182 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVF 241
V+ ADL +A+ ++ AGGP + GR D LPA P L++ F
Sbjct: 95 VSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PFFTLPQLKDSF 152
Query: 242 YRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYTKDGPGAP--- 285
+GLN ++VALSG HT G+++ S G P+ T Y + G
Sbjct: 153 RNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLN 212
Query: 286 GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK---VYAEKYAE 337
G S V + FDN Y+ +++E++ ++ +D LF P+ +A
Sbjct: 213 GNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATDTIPLVRSFAN 268
Query: 338 DQEAFFKDYAEAHAKLSNL 356
+ FF + EA ++ N+
Sbjct: 269 STQTFFNAFVEAMDRMGNI 287
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 105/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 37 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 85
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LPA P
Sbjct: 86 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PF 143
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VALSG HT G+++ S G P+ T Y
Sbjct: 144 FTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 203
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK- 329
+ G G S V FDN Y+ +++E++ ++ +D LF P+
Sbjct: 204 QTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 259
Query: 330 --VYAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 260 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 36 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 84
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LPA P
Sbjct: 85 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PF 142
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VALSG H+ G+++ S G P+ T Y
Sbjct: 143 FTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 202
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK- 329
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 203 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 258
Query: 330 --VYAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 259 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 37 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 85
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LP P
Sbjct: 86 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPQ--PF 143
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VALSG HT G+++ S G P+ T Y
Sbjct: 144 FTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 203
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK- 329
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 204 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 259
Query: 330 --VYAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 260 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 288
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 52/269 (19%)
Query: 123 LVRLGWHDAGTYDKNIEEWPRRGGANASL------RFEVELKHAANAGLVNALKLIQPIK 176
++RL +HD G +AS+ F E NA +I +K
Sbjct: 36 ILRLHFHDCFV-----------NGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMK 84
Query: 177 DKYSG-----VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPP 231
V+ ADL +A+ ++ AGGP + GR D LPA P
Sbjct: 85 AAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPA--PF 142
Query: 232 SPAEHLRNVFYRMGLN-DKEIVALSGAHTVGRSRP--------ERSGWGKPE----TKYT 278
L++ F +GLN ++VAL G HT G+++ S G P+ T Y
Sbjct: 143 FTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYL 202
Query: 279 KDGPGAP---GGQSWTVQW-----LKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFK- 329
+ G G S V + FDN Y+ +++E++ ++ +D LF P+
Sbjct: 203 QTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKG----LIQSDQELFSSPNATD 258
Query: 330 --VYAEKYAEDQEAFFKDYAEAHAKLSNL 356
+A + FF + EA ++ N+
Sbjct: 259 TIPLVRSFANSTQTFFNAFVEAMDRMGNI 287
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 43/276 (15%)
Query: 108 EDIRELLKSTFC----HPILVRLGWHDAGTYDKNIEEWPRRGG-ANASLRF--EVELKHA 160
+D++E + C H + +RL +HDA ++ + P+ GG A+ S+ VE +
Sbjct: 22 QDLQETIFQNECGEDAHEV-IRLTFHDAIAISRS--QGPKAGGGADGSMLLFPTVEPNFS 78
Query: 161 ANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEA-GGPKIPMKYGRVDVSGPEQC 219
AN G+ +++ + P K++ ++ ADL Q A A A+ G P++ GR + +
Sbjct: 79 ANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKT---IA 135
Query: 220 PEEGRLPAAGPPSPAEHLRNVFYRM----GLNDKEIVALSGAHTVGRS-RPERSGWGKP- 273
+G + P P + + + R G E+V+L +H+V R+ + +++ P
Sbjct: 136 AVDGLI-----PEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADKVDQTIDAAPF 190
Query: 274 -ETKYTKD----------GPGAPGGQSWTVQWLK-FDNSYFKDIKERRDEDLLVLPTDAV 321
T +T D G G PG + T + D E R L +D
Sbjct: 191 DSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMR------LQSDFA 244
Query: 322 LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 357
L DP + + +Q + A +KL+ LG
Sbjct: 245 LAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLG 280
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 43/276 (15%)
Query: 108 EDIRELLKSTFC----HPILVRLGWHDAGTYDKNIEEWPRRGG-ANASLRF--EVELKHA 160
+D++E + C H + +RL +HDA ++ + P+ GG A+ S+ VE +
Sbjct: 22 QDLQETIFQNECGQDAHEV-IRLTFHDAIAISRS--QGPKAGGGADGSMLLFPTVEPNFS 78
Query: 161 ANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEA-GGPKIPMKYGRVDVSGPEQC 219
AN G+ +++ + P K++ ++ ADL Q A A A+ G P++ GR + +
Sbjct: 79 ANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKT---IA 135
Query: 220 PEEGRLPAAGPPSPAEHLRNVFYRM----GLNDKEIVALSGAHTVGRS-RPERSGWGKP- 273
+G + P P + + + R G E+V+L +H+V R+ + +++ P
Sbjct: 136 AVDGLI-----PEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARANKVDQTIDAAPF 190
Query: 274 -ETKYTKD----------GPGAPGGQSWTVQWLK-FDNSYFKDIKERRDEDLLVLPTDAV 321
T +T D G G PG + T + D E R L +D
Sbjct: 191 DSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMR------LQSDFA 244
Query: 322 LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 357
L DP + + +Q + A +KL+ LG
Sbjct: 245 LAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLG 280
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 43/276 (15%)
Query: 108 EDIRELLKSTFC----HPILVRLGWHDAGTYDKNIEEWPRRGG-ANASLRF--EVELKHA 160
+D++E + C H + +RL +HDA ++ + P+ GG A+ S+ VE +
Sbjct: 22 QDLQETIFQNECGEDAHEV-IRLTFHDAIAISRS--QGPKAGGGADGSMLLFPTVEPNFS 78
Query: 161 ANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEA-GGPKIPMKYGRVDVSGPEQC 219
AN G+ +++ + P K++ ++ ADL Q A A A+ G P++ GR + +
Sbjct: 79 ANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKT---IA 135
Query: 220 PEEGRLPAAGPPSPAEHLRNVFYRM----GLNDKEIVALSGAHTVGRS-RPERSGWGKP- 273
+G + P P + + + R G E+V+L +H+V R+ + +++ P
Sbjct: 136 AVDGLI-----PEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARANKVDQTIDAAPF 190
Query: 274 -ETKYTKD----------GPGAPGGQSWTVQWLK-FDNSYFKDIKERRDEDLLVLPTDAV 321
T +T D G G PG + T + D E R L +D
Sbjct: 191 DSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMR------LQSDFA 244
Query: 322 LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 357
L DP + + +Q + A +KL+ LG
Sbjct: 245 LAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLG 280
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 167 NALKLIQPIKDKY------SGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCP 220
+A K + I+D+ + V+ +D+ LA+ ++ +GGP + GR D S
Sbjct: 83 SAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRVPLGRRD-SRSFAST 141
Query: 221 EEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRS-----------RPERSG 269
++ GP S + L + R+GL+ ++V +SG HT+G + RP+ +
Sbjct: 142 QDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHCSSFEDRLFPRPDPTI 201
Query: 270 WGKPETKYTKDGPGAPGGQSWTVQWLK----FDNSYFKDIKERRDEDLLVLPTDAVLFED 325
++ + P A G TV ++ FDN Y+ D+ R E L V +D LF +
Sbjct: 202 SPTFLSRLKRTCP-AKGTDRRTVLDVRTPNVFDNKYYIDLVNR--EGLFV--SDQDLFTN 256
Query: 326 PSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAK 359
+ E++A+ Q+ FF+ + + K+ + +
Sbjct: 257 AITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVR 290
>pdb|2CCA|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCA|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 86/216 (39%), Gaps = 51/216 (23%)
Query: 94 KCAASDPDQLKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRR 144
+ A D D L DI E++ ++ + H P+ +R+ WH AGTY I + R
Sbjct: 67 EVATIDVDALT---RDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTY--RIHD-GRG 120
Query: 145 GGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPK 203
G RF NA L A +L+ P+K KY +++ADL A A+E G
Sbjct: 121 GAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKT 180
Query: 204 IPMKYGRVDVSGPEQC------------------PEEGRLPAA-------------GPPS 232
+GRVD P++ E L A G P
Sbjct: 181 FGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPD 240
Query: 233 P---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR 264
P A +R F RM +ND E AL G HT G++
Sbjct: 241 PMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 276
>pdb|2CCD|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCD|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 86/216 (39%), Gaps = 51/216 (23%)
Query: 94 KCAASDPDQLKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRR 144
+ A D D L DI E++ ++ + H P+ +R+ WH AGTY I + R
Sbjct: 67 EVATIDVDALT---RDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTY--RIHD-GRG 120
Query: 145 GGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPK 203
G RF NA L A +L+ P+K KY +++ADL A A+E G
Sbjct: 121 GAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKT 180
Query: 204 IPMKYGRVDVSGPEQC------------------PEEGRLPAA-------------GPPS 232
+GRVD P++ E L A G P
Sbjct: 181 FGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPD 240
Query: 233 P---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR 264
P A +R F RM +ND E AL G HT G++
Sbjct: 241 PMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 276
>pdb|1SJ2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
pdb|1SJ2|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
Length = 743
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 86/216 (39%), Gaps = 51/216 (23%)
Query: 94 KCAASDPDQLKSAREDIRELLKST-------FCH--PILVRLGWHDAGTYDKNIEEWPRR 144
+ A D D L DI E++ ++ + H P+ +R+ WH AGTY I + R
Sbjct: 70 EVATIDVDALT---RDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTY--RIHD-GRG 123
Query: 145 GGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPK 203
G RF NA L A +L+ P+K KY +++ADL A A+E G
Sbjct: 124 GAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKT 183
Query: 204 IPMKYGRVDVSGPEQC------------------PEEGRLPAA-------------GPPS 232
+GRVD P++ E L A G P
Sbjct: 184 FGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPD 243
Query: 233 P---AEHLRNVFYRMGLNDKEIVAL-SGAHTVGRSR 264
P A +R F RM +ND E AL G HT G++
Sbjct: 244 PMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 279
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 47/150 (31%)
Query: 162 NAGLVNALKLIQPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQ-- 218
N L A +LI PIK KY +++ADL L A+E G + GR D ++
Sbjct: 149 NQNLDKARRLIWPIKQKYGNKISWADLMLLTGNVALENMGFKTLGFGGGRADTWQSDEAV 208
Query: 219 --------CPE-----------------------------------EGRLPAAGPPSPAE 235
P+ EG P + A+
Sbjct: 209 YWGAETTFVPQGNDVRYNNSVDINARADKLEKPLAATHMGLIYVNPEGPNGTPDPAASAK 268
Query: 236 HLRNVFYRMGLNDKEIVAL-SGAHTVGRSR 264
+R F RMG+ND E VAL +G H G++
Sbjct: 269 DIREAFGRMGMNDTETVALIAGGHAFGKTH 298
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 319 DAVLFEDPSFKVYAEKYAED--QEAFFKDYAEAHAKLSNLGAKFD 361
D V + AE YAE+ QE F KD+ A K+ NL +FD
Sbjct: 716 DLVFGSHAELRAIAEVYAENGNQEKFVKDFVAAWTKVMNLD-RFD 759
>pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase
Length = 338
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 124 VRLGWHDAGTYD---KNIEEWPRRGGANASLRF-EVELKHAANAGLVNALKLIQPIKDKY 179
VRL +HDA + + ++ G + L F ++E N GL + P +
Sbjct: 43 VRLTFHDAVGFSLAAQKAGKFGGGGADGSILAFSDIETAFIPNFGLEFTTEGFIPFALAH 102
Query: 180 SGVTYADLFQLASAT-AIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLR 238
GV++ D Q A A A AGGP++ GR ++S P P P P +
Sbjct: 103 -GVSFGDFVQFAGAVGAANCAGGPRLQFLAGRSNISQPS--------PDGLVPDPTDSAD 153
Query: 239 NVFYRM---GLNDKEIVALSGAHTV 260
+ RM G + E+V L +H++
Sbjct: 154 KILARMADIGFSPTEVVHLLASHSI 178
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 182 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVF 241
V+ AD+ A+ + AG + GR D G E P A L N F
Sbjct: 95 VSCADILAFAARDSANLAGNITYQVPSGRRD--GTVSLASEANAQIPSPLFNATQLINSF 152
Query: 242 YRMGLNDKEIVALSGAHTVG 261
L E+V LSGAH++G
Sbjct: 153 ANKTLTADEMVTLSGAHSIG 172
>pdb|3IUW|A Chain A, Crystal Structure Of Activating Signal Cointegrator
(Np_814290.1) From Enterococcus Faecalis V583 At 1.58 A
Resolution
pdb|3IUW|B Chain B, Crystal Structure Of Activating Signal Cointegrator
(Np_814290.1) From Enterococcus Faecalis V583 At 1.58 A
Resolution
Length = 83
Score = 28.9 bits (63), Expect = 5.7, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 288 QSWTVQWLKFDNSYFKDIKERR--------DEDLLVLPTDAVLFEDPSFKVYAEKYAEDQ 339
Q T+ LK + +FK +KERR D + V D ++ E+ Y + E +
Sbjct: 5 QHPTIHTLKIETEFFKAVKERRKTFEIRKNDRNFQV--GDILILEEYXNGXYLDDECEAE 62
Query: 340 EAFFKDYAE 348
+ DYA+
Sbjct: 63 VIYITDYAQ 71
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,264,785
Number of Sequences: 62578
Number of extensions: 516289
Number of successful extensions: 1217
Number of sequences better than 100.0: 121
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 823
Number of HSP's gapped (non-prelim): 135
length of query: 391
length of database: 14,973,337
effective HSP length: 101
effective length of query: 290
effective length of database: 8,652,959
effective search space: 2509358110
effective search space used: 2509358110
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.6 bits)