Query 016327
Match_columns 391
No_of_seqs 196 out of 1519
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 05:51:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016327.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016327hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02608 L-ascorbate peroxidas 100.0 5.8E-69 1.3E-73 523.5 24.5 255 92-371 3-257 (289)
2 PLN02879 L-ascorbate peroxidas 100.0 3.8E-69 8.2E-74 516.6 22.2 240 95-359 9-248 (251)
3 PLN02364 L-ascorbate peroxidas 100.0 9.4E-66 2E-70 493.5 22.3 239 96-359 9-248 (250)
4 cd00691 ascorbate_peroxidase A 100.0 2.5E-65 5.5E-70 491.6 23.9 241 98-360 8-252 (253)
5 cd00693 secretory_peroxidase H 100.0 2.2E-65 4.7E-70 502.3 21.6 253 100-371 12-296 (298)
6 PLN03030 cationic peroxidase; 100.0 1.4E-64 3.1E-69 499.1 19.6 263 83-371 25-321 (324)
7 cd00692 ligninase Ligninase an 100.0 3.8E-63 8.3E-68 490.3 24.7 268 94-387 9-304 (328)
8 cd00649 catalase_peroxidase_1 100.0 1.6E-63 3.4E-68 501.1 20.6 284 63-360 12-397 (409)
9 PRK15061 catalase/hydroperoxid 100.0 1.1E-58 2.5E-63 489.5 22.4 283 63-359 24-409 (726)
10 TIGR00198 cat_per_HPI catalase 100.0 4.3E-58 9.2E-63 487.3 20.3 283 63-359 22-403 (716)
11 cd00314 plant_peroxidase_like 100.0 8.3E-56 1.8E-60 424.6 20.4 232 105-355 2-255 (255)
12 cd08201 plant_peroxidase_like_ 100.0 1.6E-55 3.6E-60 422.9 15.7 242 76-355 12-264 (264)
13 PF00141 peroxidase: Peroxidas 100.0 1.9E-55 4.1E-60 417.9 5.9 215 106-338 1-230 (230)
14 cd08200 catalase_peroxidase_2 100.0 3.6E-50 7.9E-55 390.4 20.4 231 101-357 14-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 7.3E-45 1.6E-49 386.4 20.9 238 102-363 426-714 (716)
16 PRK15061 catalase/hydroperoxid 100.0 6.4E-44 1.4E-48 377.6 20.8 223 113-358 448-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 2.2E-43 4.7E-48 359.2 16.8 281 63-358 37-417 (730)
18 COG0376 KatG Catalase (peroxid 99.8 5.6E-18 1.2E-22 174.1 14.0 222 113-357 458-725 (730)
19 PF11895 DUF3415: Domain of un 93.1 0.07 1.5E-06 43.4 2.5 43 341-387 2-48 (80)
20 PTZ00411 transaldolase-like pr 34.7 32 0.0007 35.1 2.8 66 195-260 176-252 (333)
21 PRK12346 transaldolase A; Prov 34.1 30 0.00065 35.1 2.5 92 167-260 137-241 (316)
22 cd00957 Transaldolase_TalAB Tr 21.9 60 0.0013 32.9 2.1 90 167-259 136-239 (313)
23 PRK12309 transaldolase/EF-hand 21.8 1.1E+02 0.0024 32.0 4.0 91 167-260 142-246 (391)
No 1
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=5.8e-69 Score=523.52 Aligned_cols=255 Identities=50% Similarity=0.824 Sum_probs=233.4
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCceeechhhhccccccCcHHHHHH
Q 016327 92 TTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKL 171 (391)
Q Consensus 92 ~p~~~a~~~~~~~~v~~~i~~~l~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~~~E~~~~~N~gL~~~~~~ 171 (391)
.|.+.+....+++.+|++|+++++++.++|.||||+||||+|||+.+ +.|||||||++++|+++++|.||.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~llRLaFHDc~t~d~~~----~~gGcDgSIll~~E~~~~~N~gL~~g~~v 78 (289)
T PLN02608 3 APVVDAEYLKEIEKARRDLRALIASKNCAPIMLRLAWHDAGTYDAKT----KTGGPNGSIRNEEEYSHGANNGLKIAIDL 78 (289)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhhhhcCCcCCCC----CCCCCCeeeecccccCCccccchHHHHHH
Confidence 46666666788999999999999999999999999999999999987 57999999999999999999999889999
Q ss_pred HHHHHHhCCCCCHHHHHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHHHHHHcCCChhhh
Q 016327 172 IQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEI 251 (391)
Q Consensus 172 l~~iK~~~~~VS~ADlialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~~~~l~~~F~r~Gfs~~Em 251 (391)
|++||++++.|||||||+||+++||+++|||.|+|++||+|++++. ++++||+ |..+++++++.|+++||+++||
T Consensus 79 id~iK~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~--p~~~~~~l~~~F~~~Gl~~~D~ 153 (289)
T PLN02608 79 CEPVKAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPD--AKKGAKHLRDVFYRMGLSDKDI 153 (289)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcC--CCCCHHHHHHHHHHcCCCHHHH
Confidence 9999999999999999999999999999999999999999998874 5678999 8899999999999999999999
Q ss_pred HHhcccccccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhccCCCcccccccccccCCcchHHH
Q 016327 252 VALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVY 331 (391)
Q Consensus 252 VALsGAHTIG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~~g~~~llL~SD~~L~~D~~t~~~ 331 (391)
|||+||||||++||.++++.. +|+.+|.+|||+||++|+.+..+++++|+||++|+.|++|+.+
T Consensus 154 VaLsGAHTiG~ahc~r~g~~g----------------~~~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L~~d~~T~~~ 217 (289)
T PLN02608 154 VALSGGHTLGRAHPERSGFDG----------------PWTKEPLKFDNSYFVELLKGESEGLLKLPTDKALLEDPEFRPY 217 (289)
T ss_pred hhhccccccccccccCCCCCC----------------CCCCCCCccChHHHHHHHcCCcCCccccccCHhhhcChhHHHH
Confidence 999999999999998754321 3668899999999999999854557779999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCCceecCC
Q 016327 332 AEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDG 371 (391)
Q Consensus 332 V~~yA~dq~~F~~dFa~Am~KMs~lgv~~~~~~~i~l~c~ 371 (391)
|+.||.||+.|+++|+.||+||+++||+++..|++...-.
T Consensus 218 V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 218 VELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 9999999999999999999999999999999888766433
No 2
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3.8e-69 Score=516.59 Aligned_cols=240 Identities=48% Similarity=0.844 Sum_probs=221.6
Q ss_pred CCCCChhHHHHHHHHHHHHHHcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCceeechhhhccccccCcHHHHHHHHH
Q 016327 95 CAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQP 174 (391)
Q Consensus 95 ~~a~~~~~~~~v~~~i~~~l~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~~~E~~~~~N~gL~~~~~~l~~ 174 (391)
......++++.++++|+++++++.|+|.||||+||||+|||+.+ ++|||||||+|.+|+++++|.||..++++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~----~~GG~~Gsirf~~E~~~~~N~gL~~~~~~i~~ 84 (251)
T PLN02879 9 VKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKT----KTGGPFGTIRHPQELAHDANNGLDIAVRLLDP 84 (251)
T ss_pred ccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCC----CCCCCCeeecChhhccCCCcCChHHHHHHHHH
Confidence 33444578889999999999999999999999999999999987 47999999999999999999999889999999
Q ss_pred HHHhCCCCCHHHHHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHHHHHHcCCChhhhHHh
Q 016327 175 IKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVAL 254 (391)
Q Consensus 175 iK~~~~~VS~ADlialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~~~~l~~~F~r~Gfs~~EmVAL 254 (391)
||++++.|||||||+||+++||+++|||.|+|++||+|+..+. ++++||+ |..++++|++.|++|||+++|||||
T Consensus 85 iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~--p~~~~~~l~~~F~~~Gl~~~dlVAL 159 (251)
T PLN02879 85 IKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQ--ATKGVDHLRDVFGRMGLNDKDIVAL 159 (251)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCC--CCCCHHHHHHHHHHcCCCHHHHeee
Confidence 9999999999999999999999999999999999999998774 5789999 8899999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhccCCCcccccccccccCCcchHHHHHH
Q 016327 255 SGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEK 334 (391)
Q Consensus 255 sGAHTIG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~~g~~~llL~SD~~L~~D~~t~~~V~~ 334 (391)
+||||||++||.|+|+. ..|+.+|.+|||+||++|+.+...++++|+||++|+.|++|+.+|++
T Consensus 160 sGaHTiG~ah~~r~g~~----------------g~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~D~~t~~~V~~ 223 (251)
T PLN02879 160 SGGHTLGRCHKERSGFE----------------GAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEK 223 (251)
T ss_pred eccccccccccccccCC----------------CCCCCCccceeHHHHHHHHcCCcCCCccchhhHHHhcCCcHHHHHHH
Confidence 99999999999876441 13888999999999999999844557779999999999999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHcCCCC
Q 016327 335 YAEDQEAFFKDYAEAHAKLSNLGAK 359 (391)
Q Consensus 335 yA~dq~~F~~dFa~Am~KMs~lgv~ 359 (391)
||.||+.|+++|+.||+||+++|+.
T Consensus 224 ~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 224 YAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred HhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999984
No 3
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=9.4e-66 Score=493.47 Aligned_cols=239 Identities=47% Similarity=0.847 Sum_probs=218.1
Q ss_pred CCCChhHHHHHHHHHHHHHHcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCceeechhhhccccccCcHHHHHHHHHH
Q 016327 96 AASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPI 175 (391)
Q Consensus 96 ~a~~~~~~~~v~~~i~~~l~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~~~E~~~~~N~gL~~~~~~l~~i 175 (391)
....+.+++.++++|++++.+..++|.||||+||||+|||... +.|||||||++++|+++++|.||.+++++|++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHd~~t~dc~~----~~GG~dgSi~~~~E~~~~~N~gl~~~~~~i~~i 84 (250)
T PLN02364 9 SEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQS----RTGGPFGTMRFDAEQAHGANSGIHIALRLLDPI 84 (250)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHccccCcCcCC----CCCCCCccccccccccCCCccCHHHHHHHHHHH
Confidence 3344688999999999999888999999999999999999865 468999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHHHHHH-cCCChhhhHHh
Q 016327 176 KDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVAL 254 (391)
Q Consensus 176 K~~~~~VS~ADlialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~~~~l~~~F~r-~Gfs~~EmVAL 254 (391)
|++++.|||||||+||+++||+++|||.|+|++||+|++++. ++++||+ |..++++|++.|++ |||+++|||||
T Consensus 85 k~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~lP~--p~~~~~~l~~~F~~~~Gl~~~d~VaL 159 (250)
T PLN02364 85 REQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPP---PEGRLPD--ATKGCDHLRDVFAKQMGLSDKDIVAL 159 (250)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCccccc---ccCCCCC--CCcCHHHHHHHHHHhcCCCHHHheee
Confidence 999999999999999999999999999999999999999875 5678999 88899999999996 69999999999
Q ss_pred cccccccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhccCCCcccccccccccCCcchHHHHHH
Q 016327 255 SGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEK 334 (391)
Q Consensus 255 sGAHTIG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~~g~~~llL~SD~~L~~D~~t~~~V~~ 334 (391)
+||||||++||.++++. .+|+.+|.+|||+||++|+.+..++++.|+||+.|+.|++|+.+|+.
T Consensus 160 sGaHTiG~~hc~r~~~~----------------g~~~~tp~~fDn~Yy~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~ 223 (250)
T PLN02364 160 SGAHTLGRCHKDRSGFE----------------GAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEK 223 (250)
T ss_pred ecceeeccccCCCCCCC----------------CCCCCCCCccchHHHHHHhcCCcCCCccccchHHHccCchHHHHHHH
Confidence 99999999999876432 13668899999999999998843456667899999999999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHcCCCC
Q 016327 335 YAEDQEAFFKDYAEAHAKLSNLGAK 359 (391)
Q Consensus 335 yA~dq~~F~~dFa~Am~KMs~lgv~ 359 (391)
||.||+.|+++|++||+||+++|+.
T Consensus 224 ~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 224 YAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999974
No 4
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=2.5e-65 Score=491.61 Aligned_cols=241 Identities=61% Similarity=1.029 Sum_probs=223.7
Q ss_pred CChhHHHHHHHHHHHHHHcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCceeechhhhccccccCcHHHHHHHHHHHH
Q 016327 98 SDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKD 177 (391)
Q Consensus 98 ~~~~~~~~v~~~i~~~l~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~~~E~~~~~N~gL~~~~~~l~~iK~ 177 (391)
....++.+|+++|+++++++.++|.||||+||||++||... +.|||||+|++++|+++++|.||.+++++|++||+
T Consensus 8 ~~~~~~~~V~~~v~~~~~~~~~~~~llRl~FHDc~~~d~s~----~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~ 83 (253)
T cd00691 8 YAAKDLEAARNDIAKLIDDKNCAPILVRLAWHDSGTYDKET----KTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKK 83 (253)
T ss_pred ccHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhcccccc----CCCCCCccccchhhcCCccccchHHHHHHHHHHHH
Confidence 34678999999999999977899999999999999999876 57899999999999999999999999999999999
Q ss_pred hCCCCCHHHHHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHHHHHHcCCChhhhHHhccc
Q 016327 178 KYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGA 257 (391)
Q Consensus 178 ~~~~VS~ADlialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~~~~l~~~F~r~Gfs~~EmVALsGA 257 (391)
+++.|||||||+||+++||+.+|||.|+|++||+|+.++....++++||. |..+++++++.|+++||+++|||||+||
T Consensus 84 ~~~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~--p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 84 KYPDISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPD--ASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred HcCCCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCC--CCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 99999999999999999999999999999999999999877667789999 8889999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhccC----CCcccccccccccCCcchHHHHH
Q 016327 258 HTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRD----EDLLVLPTDAVLFEDPSFKVYAE 333 (391)
Q Consensus 258 HTIG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~~g----~~~llL~SD~~L~~D~~t~~~V~ 333 (391)
||||++||.++++.. +|+.+|.+|||+||++|+.+++ +++++|+||++|+.|++|+.+|+
T Consensus 162 HTiG~a~c~~~~~~g----------------~~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~~L~~d~~t~~~v~ 225 (253)
T cd00691 162 HTLGRCHKERSGYDG----------------PWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKALLEDPKFRPYVE 225 (253)
T ss_pred ceeecccccCCCCCC----------------CCCCCCCcccHHHHHHHhcCCCccCcCcceechhhHHHHcCccHHHHHH
Confidence 999999997643211 2557899999999999999988 78889999999999999999999
Q ss_pred HHhhCHHHHHHHHHHHHHHHHcCCCCC
Q 016327 334 KYAEDQEAFFKDYAEAHAKLSNLGAKF 360 (391)
Q Consensus 334 ~yA~dq~~F~~dFa~Am~KMs~lgv~~ 360 (391)
.||.|++.|+++|++||+||+++||+|
T Consensus 226 ~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 226 LYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred HHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999976
No 5
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.2e-65 Score=502.26 Aligned_cols=253 Identities=32% Similarity=0.484 Sum_probs=225.3
Q ss_pred hhHHHHHHHHHHHHHHcC-CchhhHHHHhhhcccccCCCCCCCCCCCCCCceeech------hhhccccccCcHHHHHHH
Q 016327 100 PDQLKSAREDIRELLKST-FCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFE------VELKHAANAGLVNALKLI 172 (391)
Q Consensus 100 ~~~~~~v~~~i~~~l~~~-~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~~------~E~~~~~N~gL~~~~~~l 172 (391)
|..+++|+++|++.+..+ .++|+||||+||||++ +||||||+++ .|+++++|.|| ++|++|
T Consensus 12 P~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v-----------~GcDaSill~~~~~~~~E~~~~~N~~l-~g~~~i 79 (298)
T cd00693 12 PNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFV-----------RGCDASVLLDSTANNTSEKDAPPNLSL-RGFDVI 79 (298)
T ss_pred CChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhc-----------cCcceeEEecCCCCCchhccCCCCCCc-chhHHH
Confidence 667889999999998765 6899999999999996 8999999985 59999999998 799999
Q ss_pred HHHHHhC----C-CCCHHHHHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 016327 173 QPIKDKY----S-GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLN 247 (391)
Q Consensus 173 ~~iK~~~----~-~VS~ADlialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~~~~l~~~F~r~Gfs 247 (391)
+.||+.+ | .||||||||||+++||+.+|||.|+|++||+|+..+...++ ++||+ |..+++++++.|+++||+
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~--p~~~~~~l~~~F~~~G~~ 156 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPS--PFFSVSQLISLFASKGLT 156 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCC--cccCHHHHHHHHHHcCCC
Confidence 9999875 4 69999999999999999999999999999999987765544 78999 889999999999999999
Q ss_pred hhhhHHhcccccccccCCC----C----CCCCCCCCcc--------ccCCCCCCC---CCCcc-ccccccchHHHHHHhh
Q 016327 248 DKEIVALSGAHTVGRSRPE----R----SGWGKPETKY--------TKDGPGAPG---GQSWT-VQWLKFDNSYFKDIKE 307 (391)
Q Consensus 248 ~~EmVALsGAHTIG~~h~~----~----sg~~~pd~~~--------~~~cP~~~g---~~~~~-~tp~~FDN~Yyk~ll~ 307 (391)
++|||||+||||||++||. | +|.+.+||.+ ++.||...+ ..+++ .||.+|||+||++|+.
T Consensus 157 ~~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~ 236 (298)
T cd00693 157 VTDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLA 236 (298)
T ss_pred HHHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHh
Confidence 9999999999999999994 2 1223455432 568986421 23455 7899999999999999
Q ss_pred ccCCCcccccccccccCCcchHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCCceecCC
Q 016327 308 RRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDG 371 (391)
Q Consensus 308 ~~g~~~llL~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KMs~lgv~~~~~~~i~l~c~ 371 (391)
+++ +|+||++|+.|++|+.+|++||.||+.|+++|+.||+||+++||+|+.+||||++|.
T Consensus 237 ~~g----lL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~ 296 (298)
T cd00693 237 GRG----LLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCR 296 (298)
T ss_pred ccc----CccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccc
Confidence 998 999999999999999999999999999999999999999999999999999999997
No 6
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.4e-64 Score=499.11 Aligned_cols=263 Identities=23% Similarity=0.350 Sum_probs=227.9
Q ss_pred ccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHcC-CchhhHHHHhhhcccccCCCCCCCCCCCCCCceeech---hhhc
Q 016327 83 VNRGYSTVPTTKCAASDPDQLKSAREDIRELLKST-FCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFE---VELK 158 (391)
Q Consensus 83 ~~~~f~~~~~p~~~a~~~~~~~~v~~~i~~~l~~~-~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~~---~E~~ 158 (391)
+.-+|+...+ |..+.+|++.|++.++.+ ..+|++|||+|||||+ +||||||+++ .|+.
T Consensus 25 L~~~fY~~sC-------P~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv-----------~GCDaSvLl~~~~~Ek~ 86 (324)
T PLN03030 25 TRVGFYSTTC-------PQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFV-----------RGCDASILIDGSNTEKT 86 (324)
T ss_pred CccchhhCcC-------CCHHHHHHHHHHHHHhhCcccchhhhhhhhhhhee-----------cCCceEEeeCCCccccc
Confidence 3346666533 677889999999999765 6899999999999996 8999999996 5999
Q ss_pred cccccCcHHHHHHHHHHHHhC----C-CCCHHHHHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 016327 159 HAANAGLVNALKLIQPIKDKY----S-GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSP 233 (391)
Q Consensus 159 ~~~N~gL~~~~~~l~~iK~~~----~-~VS~ADlialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~ 233 (391)
.+.|.+| ++|++|+.||..+ | .|||||||+||+|+||+++|||.|+|++||+|+.++...++ ++||. |+.+
T Consensus 87 a~~N~~l-~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~-~~LP~--p~~~ 162 (324)
T PLN03030 87 ALPNLLL-RGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDA-SNLPG--FTDS 162 (324)
T ss_pred CCCCcCc-chHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccc-cCCcC--CCCC
Confidence 9999987 7899999999876 4 59999999999999999999999999999999998866555 48999 8899
Q ss_pred HHHHHHHHHHcCCChhhhHHhcccccccccCCCCCC--------CC-CCCCc----c----ccCCCCCCCC---CC-ccc
Q 016327 234 AEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSG--------WG-KPETK----Y----TKDGPGAPGG---QS-WTV 292 (391)
Q Consensus 234 ~~~l~~~F~r~Gfs~~EmVALsGAHTIG~~h~~~sg--------~~-~pd~~----~----~~~cP~~~g~---~~-~~~ 292 (391)
+++|++.|+++||+.+|||+|+||||||++||..+. .+ .+|+. | ++.||...+. .. +..
T Consensus 163 ~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~ 242 (324)
T PLN03030 163 IDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTG 242 (324)
T ss_pred HHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCC
Confidence 999999999999999999999999999999996422 11 23443 3 5689842111 12 336
Q ss_pred cccccchHHHHHHhhccCCCcccccccccccCCcchHHHHHHHhhCH----HHHHHHHHHHHHHHHcCCCCCCCCCCcee
Q 016327 293 QWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQ----EAFFKDYAEAHAKLSNLGAKFDPPEGIVL 368 (391)
Q Consensus 293 tp~~FDN~Yyk~ll~~~g~~~llL~SD~~L~~D~~t~~~V~~yA~dq----~~F~~dFa~Am~KMs~lgv~~~~~~~i~l 368 (391)
||.+|||+||++|+.++| +|+||+.|+.|++|+.+|++||.|+ +.|+++|++||+||+++||+|+.+||||+
T Consensus 243 Tp~~FDn~Yy~nll~~rG----lL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk 318 (324)
T PLN03030 243 SSNRFDASFFSNLKNGRG----ILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRK 318 (324)
T ss_pred CCcccccHHHHHHHhcCC----CcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceec
Confidence 899999999999999999 9999999999999999999999875 59999999999999999999999999999
Q ss_pred cCC
Q 016327 369 DDG 371 (391)
Q Consensus 369 ~c~ 371 (391)
+|.
T Consensus 319 ~C~ 321 (324)
T PLN03030 319 VCS 321 (324)
T ss_pred ccc
Confidence 997
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=3.8e-63 Score=490.31 Aligned_cols=268 Identities=25% Similarity=0.372 Sum_probs=229.7
Q ss_pred cCCCCChhHHHHHHHHHHHHHHc-CCch---hhHHHHhhhcccccCCCC-CCCCCCCCCCceeech--hhhccccccCcH
Q 016327 94 KCAASDPDQLKSAREDIRELLKS-TFCH---PILVRLGWHDAGTYDKNI-EEWPRRGGANASLRFE--VELKHAANAGLV 166 (391)
Q Consensus 94 ~~~a~~~~~~~~v~~~i~~~l~~-~~~a---p~llRLaFHD~~t~d~~~-~~~~~~GG~dgSI~~~--~E~~~~~N~gL~ 166 (391)
.|++. ||.|..|+++|+++|.. +.|+ +.||||+||||++|++.. ..+.+.|||||||++. .|+++++|.||.
T Consensus 9 ~~~~~-cc~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~ 87 (328)
T cd00692 9 VCNAA-CCVWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLD 87 (328)
T ss_pred ccchh-hcchHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHH
Confidence 45555 99999999999999874 4665 569999999999999531 1123679999999875 589999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHhhhhhhhhc-CCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHHHHHHcC
Q 016327 167 NALKLIQPIKDKYSGVTYADLFQLASATAIEEA-GGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMG 245 (391)
Q Consensus 167 ~~~~~l~~iK~~~~~VS~ADlialAa~~AV~~~-GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~~~~l~~~F~r~G 245 (391)
..++.|+++++++. ||||||||||+++||+.| |||.|+|++||+|++.+. ++++||+ |..++++|++.|++||
T Consensus 88 ~vvd~lk~~~e~~c-VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~---~~g~LP~--p~~sv~~l~~~F~~~G 161 (328)
T cd00692 88 EIVEALRPFHQKHN-VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPA---PDGLVPE--PFDSVDKILARFADAG 161 (328)
T ss_pred HHHHHHHHHHHhcC-cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCC---cccCCCC--CCCCHHHHHHHHHHcC
Confidence 88999999999986 999999999999999965 999999999999999875 6688999 8899999999999999
Q ss_pred CChhhhHHhcccccccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhc-cC--------------
Q 016327 246 LNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKER-RD-------------- 310 (391)
Q Consensus 246 fs~~EmVALsGAHTIG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~-~g-------------- 310 (391)
|+++|||||+||||||++|.. |+.+ + +.+|+.||.+|||+||+|++.+ ++
T Consensus 162 f~~~E~VaLsGAHTiG~a~~~-------Dps~----~----g~p~D~TP~~FDn~Yf~~ll~~~~~~~g~~~~~~e~~~~ 226 (328)
T cd00692 162 FSPDELVALLAAHSVAAQDFV-------DPSI----A----GTPFDSTPGVFDTQFFIETLLKGTAFPGSGGNQGEVESP 226 (328)
T ss_pred CCHHHHhhhcccccccccCCC-------CCCC----C----CCCCCCCcchhcHHHHHHHHHcCCCCCCccccccccccC
Confidence 999999999999999999842 2221 1 2458899999999999998843 32
Q ss_pred -CCcccccccccccCCcchHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCCceecCC---CCCcccc-ccccCCC
Q 016327 311 -EDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDG---AAPEKFV-AAKYSSG 385 (391)
Q Consensus 311 -~~~llL~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KMs~lgv~~~~~~~i~l~c~---~~~~~~~-~~~~~~~ 385 (391)
+++++|+||++|+.|++|+.+|++||+||+.|+++|++||+||+++||. ...+++|+ |.|..++ .+.|+.|
T Consensus 227 ~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v~p~~~~~~~~~~~p~~ 302 (328)
T cd00692 227 LPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDVIPPPKPLSQDPTFPAG 302 (328)
T ss_pred ccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCcccCCCCCCCCCCCcCCCC
Confidence 2567899999999999999999999999999999999999999999974 55788999 6676676 5679988
Q ss_pred cc
Q 016327 386 KV 387 (391)
Q Consensus 386 ~~ 387 (391)
|.
T Consensus 303 ~~ 304 (328)
T cd00692 303 LT 304 (328)
T ss_pred CC
Confidence 85
No 8
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.6e-63 Score=501.15 Aligned_cols=284 Identities=31% Similarity=0.496 Sum_probs=244.8
Q ss_pred CCccccccccccccccCcccccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHcC---------CchhhHHHHhhhcccc
Q 016327 63 SPSSLKCLRFSPLISQRRSSVNRGYSTVPTTKCAASDPDQLKSAREDIRELLKST---------FCHPILVRLGWHDAGT 133 (391)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~p~~~a~~~~~~~~v~~~i~~~l~~~---------~~ap~llRLaFHD~~t 133 (391)
..++|++||+|...+++.|. +|++. .+....+++.||++|+++|++. .|+|.+|||+|||++|
T Consensus 12 ~~~~~~~l~~~~~~~~p~~~---~~~~~-----~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgT 83 (409)
T cd00649 12 NRLNLKILHQHSPKSNPMGE---DFNYA-----EEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGT 83 (409)
T ss_pred cccCchhhccCCCCCCCCCC---CCCHH-----HHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeecccccc
Confidence 36899999999999999887 78776 5566788999999999999863 6999999999999999
Q ss_pred cCCCCCCCCCCCCCC-ceeechhhhccccccCcHHHHHHHHHHHHhCC-CCCHHHHHHHhhhhhhhhcCCCcccCCCCCC
Q 016327 134 YDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211 (391)
Q Consensus 134 ~d~~~~~~~~~GG~d-gSI~~~~E~~~~~N~gL~~~~~~l~~iK~~~~-~VS~ADlialAa~~AV~~~GGP~i~v~~GR~ 211 (391)
||+.+ ++||+| |+|||++|.+|++|+||..++++|++||++|+ .||+||||+|||++|||.+|||.|+|++||.
T Consensus 84 y~~~d----~~GG~ngg~iRf~pe~~~~~N~gL~~a~~~L~pik~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~ 159 (409)
T cd00649 84 YRIAD----GRGGAGTGQQRFAPLNSWPDNVNLDKARRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGRE 159 (409)
T ss_pred ccCcC----CCCCCCCCccccccccCcHhhhhHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCC
Confidence 99986 589997 79999999999999999999999999999997 6999999999999999999999999999999
Q ss_pred CCCCCCC-----------------------------------CCCcC--CCCCCCCCCCHHHHHHHHHHcCCChhhhHHh
Q 016327 212 DVSGPEQ-----------------------------------CPEEG--RLPAAGPPSPAEHLRNVFYRMGLNDKEIVAL 254 (391)
Q Consensus 212 Da~~s~~-----------------------------------~~~~g--~LP~~~p~~~~~~l~~~F~r~Gfs~~EmVAL 254 (391)
|+..+.. ++++| .||+ |..++.+|++.|.|||||++|||||
T Consensus 160 Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPd--P~~sa~~LR~~F~RmGlnd~E~VAL 237 (409)
T cd00649 160 DVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPD--PLAAAKDIRETFARMAMNDEETVAL 237 (409)
T ss_pred ccCCCccccccCcchhcccccccccchhhccchhhhhccccccCCCCCCCCCC--CccCHHHHHHHHHHcCCCHHHHeee
Confidence 9976532 22445 6888 7889999999999999999999999
Q ss_pred c-ccccccccCCCCCCC-CCCCCc----------cccCCCCCCC--------CCCccccccccchHHHHHHhhcc-----
Q 016327 255 S-GAHTVGRSRPERSGW-GKPETK----------YTKDGPGAPG--------GQSWTVQWLKFDNSYFKDIKERR----- 309 (391)
Q Consensus 255 s-GAHTIG~~h~~~sg~-~~pd~~----------~~~~cP~~~g--------~~~~~~tp~~FDN~Yyk~ll~~~----- 309 (391)
+ ||||||++||..+.. -.|||. ++..||...+ +.+|+.+|++|||+||++|+..+
T Consensus 238 ~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~ 317 (409)
T cd00649 238 IAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTK 317 (409)
T ss_pred ccCCcceeecCcccccccCCCCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceecc
Confidence 5 999999999964321 113332 2357875211 34688999999999999999822
Q ss_pred ---------------------------CCCcccccccccccCCcchHHHHHHHhhCHHHHHHHHHHHHHHH--HcCCCCC
Q 016327 310 ---------------------------DEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKL--SNLGAKF 360 (391)
Q Consensus 310 ---------------------------g~~~llL~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KM--s~lgv~~ 360 (391)
..+++||+||++|+.|++++++|++||+||+.||++|++||.|| .++|+++
T Consensus 318 ~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~ 397 (409)
T cd00649 318 SPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKS 397 (409)
T ss_pred CCCCcccccccCccccccCCCccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchh
Confidence 12568999999999999999999999999999999999999999 5788765
No 9
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.1e-58 Score=489.45 Aligned_cols=283 Identities=30% Similarity=0.494 Sum_probs=242.8
Q ss_pred CCccccccccccccccCcccccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHcC---------CchhhHHHHhhhcccc
Q 016327 63 SPSSLKCLRFSPLISQRRSSVNRGYSTVPTTKCAASDPDQLKSAREDIRELLKST---------FCHPILVRLGWHDAGT 133 (391)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~p~~~a~~~~~~~~v~~~i~~~l~~~---------~~ap~llRLaFHD~~t 133 (391)
..++|++||+|+..++|.|. +|++. .+....+++.||++|+++|++. .++|.+|||+||+++|
T Consensus 24 ~~l~l~~l~~~~~~~~p~~~---~f~y~-----~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgT 95 (726)
T PRK15061 24 NQLNLDILHQHSSKSNPMGE---DFDYA-----EEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGT 95 (726)
T ss_pred cccCchhhccCCCCCCCCCC---CCCHH-----HHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeeccccc
Confidence 37899999999999999887 79987 6667789999999999999863 6899999999999999
Q ss_pred cCCCCCCCCCCCCCC-ceeechhhhccccccCcHHHHHHHHHHHHhCC-CCCHHHHHHHhhhhhhhhcCCCcccCCCCCC
Q 016327 134 YDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211 (391)
Q Consensus 134 ~d~~~~~~~~~GG~d-gSI~~~~E~~~~~N~gL~~~~~~l~~iK~~~~-~VS~ADlialAa~~AV~~~GGP~i~v~~GR~ 211 (391)
|++.+ ++||++ |+|||++|.+|++|.||..++++|++||++|+ .||+||||+|||++|||.||||+|+|++||.
T Consensus 96 Yr~~d----~rGGangg~iRf~pe~~w~~N~gL~ka~~~L~pik~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~ 171 (726)
T PRK15061 96 YRIGD----GRGGAGGGQQRFAPLNSWPDNVNLDKARRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGRE 171 (726)
T ss_pred ccCcC----CCCCCCCCcccCcccccchhhhhHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCC
Confidence 99986 589997 79999999999999999999999999999997 6999999999999999999999999999999
Q ss_pred CCCCCCCC------------------------------------CCcC--CCCCCCCCCCHHHHHHHHHHcCCChhhhHH
Q 016327 212 DVSGPEQC------------------------------------PEEG--RLPAAGPPSPAEHLRNVFYRMGLNDKEIVA 253 (391)
Q Consensus 212 Da~~s~~~------------------------------------~~~g--~LP~~~p~~~~~~l~~~F~r~Gfs~~EmVA 253 (391)
|...+..+ .++| .+|+ |..++.+|++.|.|||||++||||
T Consensus 172 D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPd--P~~sa~~lR~tF~RMGmnDeEtVA 249 (726)
T PRK15061 172 DVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPD--PLAAARDIRETFARMAMNDEETVA 249 (726)
T ss_pred CCcCCccccccCccccccccccccccccccccchhhhhccceecCCCCCCCCCC--cccCHHHHHHHHHHcCCCHHHhee
Confidence 99765431 0111 1566 778899999999999999999999
Q ss_pred hc-ccccccccCCCCCCC-CCCCCc----------cccCCCCCCC--------CCCccccccccchHHHHHHhhcc----
Q 016327 254 LS-GAHTVGRSRPERSGW-GKPETK----------YTKDGPGAPG--------GQSWTVQWLKFDNSYFKDIKERR---- 309 (391)
Q Consensus 254 Ls-GAHTIG~~h~~~sg~-~~pd~~----------~~~~cP~~~g--------~~~~~~tp~~FDN~Yyk~ll~~~---- 309 (391)
|+ ||||||++||..+.. -.|||. ++..||...+ +.+|+.+|++|||+||++|+...
T Consensus 250 LiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~ 329 (726)
T PRK15061 250 LIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELT 329 (726)
T ss_pred eccCCceeeeCCCcCcccccCCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceec
Confidence 96 999999999964321 124443 2467875211 34788999999999999999851
Q ss_pred ----------------------------CCCcccccccccccCCcchHHHHHHHhhCHHHHHHHHHHHHHHHHc--CCCC
Q 016327 310 ----------------------------DEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN--LGAK 359 (391)
Q Consensus 310 ----------------------------g~~~llL~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KMs~--lgv~ 359 (391)
...++||+||++|..|+.++++|++||+||+.|+++|++||.||.+ +|.+
T Consensus 330 ~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~ 409 (726)
T PRK15061 330 KSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPK 409 (726)
T ss_pred cCCCccccccccCccccccCCcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCch
Confidence 0147899999999999999999999999999999999999999955 6653
No 10
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=4.3e-58 Score=487.30 Aligned_cols=283 Identities=29% Similarity=0.473 Sum_probs=240.5
Q ss_pred CCccccccccccccccCcccccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHcC---------CchhhHHHHhhhcccc
Q 016327 63 SPSSLKCLRFSPLISQRRSSVNRGYSTVPTTKCAASDPDQLKSAREDIRELLKST---------FCHPILVRLGWHDAGT 133 (391)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~p~~~a~~~~~~~~v~~~i~~~l~~~---------~~ap~llRLaFHD~~t 133 (391)
..++|++||+|...++|.|. +|++. .+....+++.||++|+++|++. .|+|.||||+||+++|
T Consensus 22 ~~l~~~~l~~~~~~~~p~~~---~f~y~-----~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgT 93 (716)
T TIGR00198 22 NALNLDILHQHDRKTNPMGE---DFDYA-----EEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGT 93 (716)
T ss_pred cccCchhhccCCCCCCCCCC---CccHH-----HHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeecccccc
Confidence 47899999999999999887 79887 5566788999999999999863 6999999999999999
Q ss_pred cCCCCCCCCCCCCCC-ceeechhhhccccccCcHHHHHHHHHHHHhCC-CCCHHHHHHHhhhhhhhhcCCCcccCCCCCC
Q 016327 134 YDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211 (391)
Q Consensus 134 ~d~~~~~~~~~GG~d-gSI~~~~E~~~~~N~gL~~~~~~l~~iK~~~~-~VS~ADlialAa~~AV~~~GGP~i~v~~GR~ 211 (391)
|+..+ ++||++ |+|||+||.+|++|.||..++++|++||++|+ .|||||||+|||++|||.+|||.|+|.+||+
T Consensus 94 Yr~~d----~rGGa~gg~iRf~P~~sw~~N~~Ldka~~lL~pIk~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~ 169 (716)
T TIGR00198 94 YRIAD----GRGGAATGNQRFAPLNSWPDNVNLDKARRLLWPIKKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGRE 169 (716)
T ss_pred ccCCC----CCCCCCCCceecccccCchhhhhHHHHHHHHHHHHHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCC
Confidence 99886 689995 79999999999999999999999999999998 6999999999999999999999999999999
Q ss_pred CCCCCCC----------------------------------CCCcC--CCCCCCCCCCHHHHHHHHHHcCCChhhhHHhc
Q 016327 212 DVSGPEQ----------------------------------CPEEG--RLPAAGPPSPAEHLRNVFYRMGLNDKEIVALS 255 (391)
Q Consensus 212 Da~~s~~----------------------------------~~~~g--~LP~~~p~~~~~~l~~~F~r~Gfs~~EmVALs 255 (391)
|+..+.. ..+++ .+|+ |..++.+|++.|.+||||++|||||+
T Consensus 170 D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~~~Gliyvnpeg~~~lPd--P~~sa~~Lrd~F~rmGLnd~EmVALi 247 (716)
T TIGR00198 170 DIWEPDKDIYWGAEKEWLTSSREDRESLENPLAATEMGLIYVNPEGPDGHPD--PLCTAQDIRTTFARMGMNDEETVALI 247 (716)
T ss_pred CCCCcccccccccccchhhccccccccccccchhhhccccccCcccccCCCC--CCCCHHHHHHHHHHcCCChHHHeeee
Confidence 9964431 01122 5787 77899999999999999999999996
Q ss_pred -ccccccccCCCCCC-CCCCCCc--------cccCCCCCCC----------CCCccccccccchHHHHHHhhcc------
Q 016327 256 -GAHTVGRSRPERSG-WGKPETK--------YTKDGPGAPG----------GQSWTVQWLKFDNSYFKDIKERR------ 309 (391)
Q Consensus 256 -GAHTIG~~h~~~sg-~~~pd~~--------~~~~cP~~~g----------~~~~~~tp~~FDN~Yyk~ll~~~------ 309 (391)
||||||++||.... .-.|||. +...||...+ +..|+.+|.+|||+||++|+...
T Consensus 248 aGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s 327 (716)
T TIGR00198 248 AGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKS 327 (716)
T ss_pred cCceeccccCCCcccccCCCCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeec
Confidence 99999999996321 0124443 2345653111 24688999999999999999751
Q ss_pred ------------------------CCCcccccccccccCCcchHHHHHHHhhCHHHHHHHHHHHHHHHHc--CCCC
Q 016327 310 ------------------------DEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN--LGAK 359 (391)
Q Consensus 310 ------------------------g~~~llL~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KMs~--lgv~ 359 (391)
...+++|+||++|..|++++.+|+.||.|++.|+++|++||.||++ +|.+
T Consensus 328 ~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~ 403 (716)
T TIGR00198 328 PAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPK 403 (716)
T ss_pred CCCCceeeecccccccccccccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCch
Confidence 0136799999999999999999999999999999999999999994 6643
No 11
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=8.3e-56 Score=424.58 Aligned_cols=232 Identities=41% Similarity=0.692 Sum_probs=205.9
Q ss_pred HHHHHHHHHHHc-CCchhhHHHHhhhcccccCCCCCCCCCCCCCCceeechhhhccccccCcHHHHHHHHHHHHhCC---
Q 016327 105 SAREDIRELLKS-TFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYS--- 180 (391)
Q Consensus 105 ~v~~~i~~~l~~-~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~~~E~~~~~N~gL~~~~~~l~~iK~~~~--- 180 (391)
.|++.|++.+.+ ..+++.+|||+||||+||+..+. +.|||||||++++|+++++|.||.+++++|++||.+++
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~---~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~~~~ 78 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADG---KGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYDGGN 78 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCC---CCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcCCCC
Confidence 477888888865 46899999999999999998764 57999999999999999999999999999999999997
Q ss_pred CCCHHHHHHHhhhhhhhhc--CCCcccCCCCCCCCCCCC--CCCCcCCCCCCCCCCCHHHHHHHHHHcCCChhhhHHhc-
Q 016327 181 GVTYADLFQLASATAIEEA--GGPKIPMKYGRVDVSGPE--QCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALS- 255 (391)
Q Consensus 181 ~VS~ADlialAa~~AV~~~--GGP~i~v~~GR~Da~~s~--~~~~~g~LP~~~p~~~~~~l~~~F~r~Gfs~~EmVALs- 255 (391)
.|||||||+||+++||+.+ |||.|+|++||+|+..+. ...+.+++|. +..+++++++.|.++||+++|||||+
T Consensus 79 ~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~--~~~~~~~~~~~F~~~Gl~~~e~VAL~~ 156 (255)
T cd00314 79 PVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPN--ETSSATELRDKFKRMGLSPSELVALSA 156 (255)
T ss_pred cccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCC--ccchHHHHHHHHHHcCCCHHHHHhhcc
Confidence 6999999999999999999 999999999999998653 3346677887 77889999999999999999999999
Q ss_pred ccccc-cccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhccC------------CCcccccccccc
Q 016327 256 GAHTV-GRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRD------------EDLLVLPTDAVL 322 (391)
Q Consensus 256 GAHTI-G~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~~g------------~~~llL~SD~~L 322 (391)
||||| |++||..++.. .| ..|+.+|.+|||+||++|+.++. ..+.+|+||++|
T Consensus 157 GaHti~G~~~~~~~~~~--------~~------~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~~~~~~~~~~l~sD~~L 222 (255)
T cd00314 157 GAHTLGGKNHGDLLNYE--------GS------GLWTSTPFTFDNAYFKNLLDMNWEWRVGSPDPDGVKGPGLLPSDYAL 222 (255)
T ss_pred CCeeccCcccCCCCCcc--------cC------CCCCCCCCccchHHHHHHhcCCcccccCCccCCCcccCCCchhhHHH
Confidence 99999 99999754321 02 24788999999999999999772 234599999999
Q ss_pred cCCcchHHHHHHHhhCHHHHHHHHHHHHHHHHc
Q 016327 323 FEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355 (391)
Q Consensus 323 ~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KMs~ 355 (391)
+.|++++.+|+.||.|++.|+++|++||.||++
T Consensus 223 ~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 223 LSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred hcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999974
No 12
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.6e-55 Score=422.93 Aligned_cols=242 Identities=23% Similarity=0.367 Sum_probs=204.6
Q ss_pred cccCcccccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCceeechh
Q 016327 76 ISQRRSSVNRGYSTVPTTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEV 155 (391)
Q Consensus 76 ~~~~~~~~~~~f~~~~~p~~~a~~~~~~~~v~~~i~~~l~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~~~ 155 (391)
+-++.||..++|++.|+||++.....+ ...++.||||+||||+|||+.+ ++|||||||+++
T Consensus 12 ~~~~~g~~~~~f~~~v~~c~~~~~~~~--------------~~~aa~~LRL~FHDc~t~~~~~----g~gGcDgSIlle- 72 (264)
T cd08201 12 LYLQSGYSARGFVAGVTPCTDCAPGPG--------------RQAAAEWLRTAFHDMATHNVDD----GTGGLDASIQYE- 72 (264)
T ss_pred HHhcccceecccccccccccccCcCCC--------------ccHHHHHHHHHHHhhcCcccCC----CCCCCCcceeec-
Confidence 347889999999999999987664332 2578999999999999999986 589999999994
Q ss_pred hhccccccCcH--HHHHHHHHHHHhCCCCCHHHHHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 016327 156 ELKHAANAGLV--NALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSP 233 (391)
Q Consensus 156 E~~~~~N~gL~--~~~~~l~~iK~~~~~VS~ADlialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~ 233 (391)
..++||.|+. ..++.+++|+. +.||||||||||+++||+.||||.|+|++||+|++++. +++ ||+ |..+
T Consensus 73 -~~~~En~G~~~n~~l~~~~~i~~--~~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~---~~g-lP~--P~~~ 143 (264)
T cd08201 73 -LDRPENIGSGFNTTLNFFVNFYS--PRSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAG---QAG-VPE--PQTD 143 (264)
T ss_pred -CCChhhccCchhhccccceeecc--CccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccc---ccc-CCC--CccC
Confidence 7789999986 45666666643 37999999999999999999999999999999999875 345 999 8899
Q ss_pred HHHHHHHHHHcCCChhhhHHhcc-cccccccCCCCCCCCCCCCccccCCCCCC--CCCCccccccccchHHHHHHhhccC
Q 016327 234 AEHLRNVFYRMGLNDKEIVALSG-AHTVGRSRPERSGWGKPETKYTKDGPGAP--GGQSWTVQWLKFDNSYFKDIKERRD 310 (391)
Q Consensus 234 ~~~l~~~F~r~Gfs~~EmVALsG-AHTIG~~h~~~sg~~~pd~~~~~~cP~~~--g~~~~~~tp~~FDN~Yyk~ll~~~g 310 (391)
+++|++.|++|||+++|||+|+| |||||++||.+++...+ |+.. ++.+|+.+|.+|||+||.|++++..
T Consensus 144 v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~--------~g~~~~~~~p~dstp~~FDn~~f~E~l~g~~ 215 (264)
T cd08201 144 LGTTTESFRRQGFSTSEMIALVACGHTLGGVHSEDFPEIVP--------PGSVPDTVLQFFDTTIQFDNKVVTEYLSGTT 215 (264)
T ss_pred HHHHHHHHHHcCCChHHHheeecCCeeeeecccccchhhcC--------CccccCCCCCCCCCccccchHHHHHHhcCCC
Confidence 99999999999999999999995 99999999987533211 1111 3557999999999999999999988
Q ss_pred CCccc------ccccccccCCcchHHHHHHHhhCHHHHHHHHHHHHHHHHc
Q 016327 311 EDLLV------LPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSN 355 (391)
Q Consensus 311 ~~~ll------L~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KMs~ 355 (391)
+++|+ +.||..+|..+.. ..++.+| +++.|.+.|+..++||++
T Consensus 216 ~~~L~~~~~~~~~sd~r~f~~d~n-~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 216 NNPLVVGPNNTTNSDLRIFSSDGN-VTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred CCceeecCCCCccchhhheecCcc-HHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 88876 5789999986644 4567887 899999999999999985
No 13
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.9e-55 Score=417.94 Aligned_cols=215 Identities=36% Similarity=0.614 Sum_probs=179.0
Q ss_pred HHHHHHHHHHc-CCchhhHHHHhhhcccccCCCCCCCCCCCCCCceeec-hhhhccccccCcHHHHHHHHHHHHhCC---
Q 016327 106 AREDIRELLKS-TFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRF-EVELKHAANAGLVNALKLIQPIKDKYS--- 180 (391)
Q Consensus 106 v~~~i~~~l~~-~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgSI~~-~~E~~~~~N~gL~~~~~~l~~iK~~~~--- 180 (391)
||++|+++++. ..++|.||||+||||++| |||||||++ ..|+++++|.||..++++|++||++++
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~----------~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~~c 70 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVY----------GGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEAAC 70 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTH----------TSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCHHS
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccc----------cccccceeccccccccccccCcceeeechhhHHhhhcccc
Confidence 78999999986 579999999999999964 799999976 789999999999889999999999875
Q ss_pred --CCCHHHHHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHHHHHHcCCChhhhHHhcccc
Q 016327 181 --GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAH 258 (391)
Q Consensus 181 --~VS~ADlialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p~~~~~~l~~~F~r~Gfs~~EmVALsGAH 258 (391)
.|||||||+||+++||+.+|||.|+|++||+|+..+....+ .+||. |..++++|++.|+++||+++|||||+|||
T Consensus 71 p~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~--p~~~~~~l~~~F~~~Gls~~e~VaLsGaH 147 (230)
T PF00141_consen 71 PGVVSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPS--PTDSVDQLLAFFARKGLSAEEMVALSGAH 147 (230)
T ss_dssp TTTS-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSST--TTSHHHHHHHHHHHTT--HHHHHHHHGGG
T ss_pred cCCCCHHHHHHHHhhhccccccccccccccccccccccccccc-ccccc--cccccchhhhhhhccccchhhhcceeccc
Confidence 49999999999999999999999999999999998875433 46998 88999999999999999999999999999
Q ss_pred cccccCCCCCC--CCCCCC----ccc-cCCCCCC-CCCCccccccccchHHHHHHhhccCCCcccccccccccCCcchHH
Q 016327 259 TVGRSRPERSG--WGKPET----KYT-KDGPGAP-GGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKV 330 (391)
Q Consensus 259 TIG~~h~~~sg--~~~pd~----~~~-~~cP~~~-g~~~~~~tp~~FDN~Yyk~ll~~~g~~~llL~SD~~L~~D~~t~~ 330 (391)
|||++||..+. +..+|+ .|. ..|+..+ ...+++ +|.+|||+||++|+++++ +|+||++|+.|++|+.
T Consensus 148 TiG~~~c~~f~rl~~~~dp~~d~~~~~~~C~~~~~~~~~~d-tp~~fDN~Yy~~ll~~~g----ll~SD~~L~~d~~t~~ 222 (230)
T PF00141_consen 148 TIGRAHCSSFSRLYFPPDPTMDPGYAGQNCNSGGDNGVPLD-TPTVFDNSYYKNLLNGRG----LLPSDQALLNDPETRP 222 (230)
T ss_dssp GSTEESGGCTGGTSCSSGTTSTHHHHHHSSSTSGCTCEESS-STTS-SSHHHHHHHHTEE----EEHHHHHHHHSTTHHH
T ss_pred ccccceeccccccccccccccccccceeccCCCcccccccc-CCCcchhHHHHHHhcCCC----cCHHHHHHhcCHHHHH
Confidence 99999997322 012232 342 2572211 122345 899999999999999998 9999999999999999
Q ss_pred HHHHHhhC
Q 016327 331 YAEKYAED 338 (391)
Q Consensus 331 ~V~~yA~d 338 (391)
+|++||+|
T Consensus 223 ~V~~yA~d 230 (230)
T PF00141_consen 223 IVERYAQD 230 (230)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcC
Confidence 99999976
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=3.6e-50 Score=390.45 Aligned_cols=231 Identities=26% Similarity=0.399 Sum_probs=194.1
Q ss_pred hHHHHHHHHHHHHHHcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCce-eechhhhccccccC--cHHHHHHHHHHHH
Q 016327 101 DQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANAS-LRFEVELKHAANAG--LVNALKLIQPIKD 177 (391)
Q Consensus 101 ~~~~~v~~~i~~~l~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgS-I~~~~E~~~~~N~g--L~~~~~~l~~iK~ 177 (391)
.++..+++ +++..+.+++.+|||+||+++||+..+ ++||+||+ |||+||++|+.|.| |..++++|++||+
T Consensus 14 ~di~~lk~---~i~~~gl~~~~lvrlAWhsAgTyr~sd----~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~Le~ik~ 86 (297)
T cd08200 14 ADIAALKA---KILASGLTVSELVSTAWASASTFRNSD----KRGGANGARIRLAPQKDWEVNEPEELAKVLAVLEGIQK 86 (297)
T ss_pred HHHHHHHH---HHHhcCCcHHHHHHHhhhccccccCCC----CCCCCCcccccCccccCcCccCcHHHHHHHHHHHHHHH
Confidence 34444443 344567899999999999999999986 68999997 99999999999999 9999999999999
Q ss_pred hCC-------CCCHHHHHHHhhhhhhhhcCC-----CcccCCCCCCCCCCCCCCCCc---CCCCCCC----------CCC
Q 016327 178 KYS-------GVTYADLFQLASATAIEEAGG-----PKIPMKYGRVDVSGPEQCPEE---GRLPAAG----------PPS 232 (391)
Q Consensus 178 ~~~-------~VS~ADlialAa~~AV~~~GG-----P~i~v~~GR~Da~~s~~~~~~---g~LP~~~----------p~~ 232 (391)
+|| .||+||||+|||++|||.+|| |.|||++||.|++.+. ++++ .++|.+. +..
T Consensus 87 ~~~~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~-td~~sf~~l~P~adg~rny~~~~~~~~ 165 (297)
T cd08200 87 EFNESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQ-TDVESFEVLEPKADGFRNYLKKGYRVP 165 (297)
T ss_pred HhcccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCC-CCcccccccCCCCcccccccccCCCCC
Confidence 997 799999999999999999999 9999999999997653 3333 2445322 123
Q ss_pred CHHHHHHHHHHcCCChhhhHHhcccc-cccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhcc--
Q 016327 233 PAEHLRNVFYRMGLNDKEIVALSGAH-TVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERR-- 309 (391)
Q Consensus 233 ~~~~l~~~F~r~Gfs~~EmVALsGAH-TIG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~~-- 309 (391)
+.++|+++|.+|||+++|||||+||| ++|++|. +++. ..||.+|.+|||.||++|++..
T Consensus 166 ~~~~Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~-~s~~-----------------G~wT~~p~~f~N~fF~nLLd~~~~ 227 (297)
T cd08200 166 PEEMLVDKAQLLTLTAPEMTVLVGGLRVLGANYG-GSKH-----------------GVFTDRPGVLTNDFFVNLLDMSTE 227 (297)
T ss_pred HHHHHHHHHHhCCCChHHHhheecchhhcccCCC-CCCC-----------------CCCcCCCCccccHHHHHHhcccce
Confidence 56789999999999999999999998 6999885 3332 1499999999999999999621
Q ss_pred -----------------CCCcc--cccccccccCCcchHHHHHHHhhC--HHHHHHHHHHHHHHHHcCC
Q 016327 310 -----------------DEDLL--VLPTDAVLFEDPSFKVYAEKYAED--QEAFFKDYAEAHAKLSNLG 357 (391)
Q Consensus 310 -----------------g~~~l--lL~SD~~L~~D~~t~~~V~~yA~d--q~~F~~dFa~Am~KMs~lg 357 (391)
++.++ ++++|++|..|+++|.+|+.||.| |+.||+||++||.||+++.
T Consensus 228 W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 228 WKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred eeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 12233 478899999999999999999999 9999999999999999984
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=7.3e-45 Score=386.43 Aligned_cols=238 Identities=28% Similarity=0.425 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHH----HcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCce-eechhhhccccc--cCcHHHHHHHHH
Q 016327 102 QLKSAREDIRELL----KSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANAS-LRFEVELKHAAN--AGLVNALKLIQP 174 (391)
Q Consensus 102 ~~~~v~~~i~~~l----~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgS-I~~~~E~~~~~N--~gL~~~~~~l~~ 174 (391)
+++.|+++|+++. .++-+.+.||||+||+++|||..+ ++||+||. |||++|++|+.| .||..++++||+
T Consensus 426 ~~~~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd----~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~Le~ 501 (716)
T TIGR00198 426 DYTLSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSD----YRGGANGARIRLEPQKNWPVNEPTRLAKVLAVLEK 501 (716)
T ss_pred CchhHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCC----CCCCCCcceeecchhcCcccCCHHHHHHHHHHHHH
Confidence 4566788888764 446789999999999999999986 58999996 999999999999 899999999999
Q ss_pred HHHhCC--CCCHHHHHHHhhhhhhhhc---CCC--cccCCCCCCCCCCCCCCCCcCCCCCC---C----------CCCCH
Q 016327 175 IKDKYS--GVTYADLFQLASATAIEEA---GGP--KIPMKYGRVDVSGPEQCPEEGRLPAA---G----------PPSPA 234 (391)
Q Consensus 175 iK~~~~--~VS~ADlialAa~~AV~~~---GGP--~i~v~~GR~Da~~s~~~~~~g~LP~~---~----------p~~~~ 234 (391)
||++|+ .||+||||+|||++|||.+ ||| .|||++||.|++.. ++++++..|.. . ...+.
T Consensus 502 Ik~~f~~~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~-~td~~~~~~l~p~adgfRn~~~~~~~~~~~ 580 (716)
T TIGR00198 502 IQAEFAKGPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQA-MTDAESFTPLEPIADGFRNYLKRDYAVTPE 580 (716)
T ss_pred HHHHcCCCcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccC-CCCccccccCCCCCcccchhccccccCCHH
Confidence 999999 8999999999999999999 897 68999999999765 34555555431 0 12345
Q ss_pred HHHHHHHHHcCCChhhhHHhcccc-cccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhcc----
Q 016327 235 EHLRNVFYRMGLNDKEIVALSGAH-TVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERR---- 309 (391)
Q Consensus 235 ~~l~~~F~r~Gfs~~EmVALsGAH-TIG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~~---- 309 (391)
++|+++|.+|||++.|||||+||| ++|++|.. ++. ..||.+|.+|||.||++|++-.
T Consensus 581 ~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~-s~~-----------------G~~T~~p~~f~NdfF~~LLd~~~~w~ 642 (716)
T TIGR00198 581 ELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGG-SKH-----------------GVFTDRVGVLSNDFFVNLLDMAYEWR 642 (716)
T ss_pred HHHHHHHHhCCCChHHHHheecchhhccccCCC-CCC-----------------CCCcCCCCccccHHHHHHhcCCceee
Confidence 678999999999999999999995 99999874 222 2499999999999999999721
Q ss_pred ---------------CCCcccc--cccccccCCcchHHHHHHHhhCH--HHHHHHHHHHHHHHHcCCCCCCCC
Q 016327 310 ---------------DEDLLVL--PTDAVLFEDPSFKVYAEKYAEDQ--EAFFKDYAEAHAKLSNLGAKFDPP 363 (391)
Q Consensus 310 ---------------g~~~llL--~SD~~L~~D~~t~~~V~~yA~dq--~~F~~dFa~Am~KMs~lgv~~~~~ 363 (391)
.+.+.++ ++|++|..|+++|.+|+.||.|+ +.|++||++||.||+++|. |+.+
T Consensus 643 ~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~ldr-fd~~ 714 (716)
T TIGR00198 643 AADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVMNLDR-FDLP 714 (716)
T ss_pred ecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHHhCCC-cccc
Confidence 1233343 77999999999999999999997 8999999999999999985 4443
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=6.4e-44 Score=377.59 Aligned_cols=223 Identities=27% Similarity=0.413 Sum_probs=191.6
Q ss_pred HHHcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCce-eechhhhcccccc--CcHHHHHHHHHHHHhC-------CCC
Q 016327 113 LLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANAS-LRFEVELKHAANA--GLVNALKLIQPIKDKY-------SGV 182 (391)
Q Consensus 113 ~l~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dgS-I~~~~E~~~~~N~--gL~~~~~~l~~iK~~~-------~~V 182 (391)
++.++-..|.||||+||+++|||..+ ++||+||. |||++|++|+.|+ ||..++++|++||++| +.|
T Consensus 448 i~~~gl~~~~LVr~AWhsA~Tyr~sd----~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~~~~~~~~v 523 (726)
T PRK15061 448 ILASGLSVSELVSTAWASASTFRGSD----KRGGANGARIRLAPQKDWEVNEPAQLAKVLAVLEGIQAEFNAAQSGGKKV 523 (726)
T ss_pred HHhcCCcHHHHHHHHHhhcccccCCC----CCCCCCccceecccccCccccCHHHHHHHHHHHHHHHHHHhhccCCCCce
Confidence 45667789999999999999999986 68999996 9999999999999 9999999999999999 579
Q ss_pred CHHHHHHHhhhhhhhhc---CC--CcccCCCCCCCCCCCCCCCCcC---CCCCCCC----------CCCHHHHHHHHHHc
Q 016327 183 TYADLFQLASATAIEEA---GG--PKIPMKYGRVDVSGPEQCPEEG---RLPAAGP----------PSPAEHLRNVFYRM 244 (391)
Q Consensus 183 S~ADlialAa~~AV~~~---GG--P~i~v~~GR~Da~~s~~~~~~g---~LP~~~p----------~~~~~~l~~~F~r~ 244 (391)
|+||||+|||++|||.+ || |.|||++||.|++.. +++++. ++|.+.. -.+.++|+++|.+|
T Consensus 524 S~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~-~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L~d~a~~l 602 (726)
T PRK15061 524 SLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQE-QTDVESFAVLEPKADGFRNYLKKGYSVSPEELLVDKAQLL 602 (726)
T ss_pred eHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccC-CCCcccccccCCCCccccccccccCCCCHHHHHHHHHHhC
Confidence 99999999999999999 58 999999999999764 455543 5675421 12457899999999
Q ss_pred CCChhhhHHhcccc-cccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhc---------------
Q 016327 245 GLNDKEIVALSGAH-TVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKER--------------- 308 (391)
Q Consensus 245 Gfs~~EmVALsGAH-TIG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~--------------- 308 (391)
||++.|||||+||| ++|++|.. ++. ..||.+|.+|||.||++|++-
T Consensus 603 glt~~EmvaL~Gg~r~Lg~~~~~-S~~-----------------G~~T~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye 664 (726)
T PRK15061 603 TLTAPEMTVLVGGLRVLGANYGG-SKH-----------------GVFTDRPGVLTNDFFVNLLDMGTEWKPTDEDEEVYE 664 (726)
T ss_pred CCChHHHhheecchhhcccCCCC-CCC-----------------CCCcCCCCccccHHHHHHhcCCceeeecCCCCCcee
Confidence 99999999999997 78888843 322 248999999999999999952
Q ss_pred ----cCCCccc--ccccccccCCcchHHHHHHHhhC--HHHHHHHHHHHHHHHHcCCC
Q 016327 309 ----RDEDLLV--LPTDAVLFEDPSFKVYAEKYAED--QEAFFKDYAEAHAKLSNLGA 358 (391)
Q Consensus 309 ----~g~~~ll--L~SD~~L~~D~~t~~~V~~yA~d--q~~F~~dFa~Am~KMs~lgv 358 (391)
+++.+++ +++|.+|..|+.+|.+|+.||.| ++.|++||++||.||++++-
T Consensus 665 ~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeldr 722 (726)
T PRK15061 665 GRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLDR 722 (726)
T ss_pred eccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCCC
Confidence 1234554 47899999999999999999999 99999999999999999974
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-43 Score=359.22 Aligned_cols=281 Identities=30% Similarity=0.495 Sum_probs=234.8
Q ss_pred CCccccccccccccccCcccccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHcC---------CchhhHHHHhhhcccc
Q 016327 63 SPSSLKCLRFSPLISQRRSSVNRGYSTVPTTKCAASDPDQLKSAREDIRELLKST---------FCHPILVRLGWHDAGT 133 (391)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~p~~~a~~~~~~~~v~~~i~~~l~~~---------~~ap~llRLaFHD~~t 133 (391)
..++|++||+|+..|++.|. .|++. .+....++..|+.++++++.+. .++|.+|||+||-++|
T Consensus 37 N~L~l~iL~qh~~~snP~g~---~fdYa-----eefk~lD~~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGT 108 (730)
T COG0376 37 NQLNLKILHQHSSKSNPMGE---DFDYA-----EEFKSLDLAAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGT 108 (730)
T ss_pred ccccchHHhhhhcccCCCcc---chHHH-----HHhhhccHHHHHHHHHHHhhcccccCcccccccccceeeeeecccCc
Confidence 47899999999999999888 78876 5555678889999999999763 4789999999999999
Q ss_pred cCCCCCCCCCCCCCC-ceeechhhhccccccCcHHHHHHHHHHHHhCC-CCCHHHHHHHhhhhhhhhcCCCcccCCCCCC
Q 016327 134 YDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYS-GVTYADLFQLASATAIEEAGGPKIPMKYGRV 211 (391)
Q Consensus 134 ~d~~~~~~~~~GG~d-gSI~~~~E~~~~~N~gL~~~~~~l~~iK~~~~-~VS~ADlialAa~~AV~~~GGP~i~v~~GR~ 211 (391)
|+..+ ++||+. |..||.++.+||.|.+|++++.+|.|||++|. .||+||||+|+|.+|+|.+|++++.|..||.
T Consensus 109 YRi~D----GRGGa~~G~qRFaPlnSWPDN~nLDKarRLLWPIKkKYG~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~ 184 (730)
T COG0376 109 YRIGD----GRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPIKKKYGRKISWADLIILAGNVALESMGFKTFGFAGGRE 184 (730)
T ss_pred eeccc----CCCCCCCCceecccccCCCcccchHHHHHHhhhHhHhhcccccHhHhhhhhchhhhhhcCCccccccCCCC
Confidence 99875 678885 69999999999999999999999999999998 6999999999999999999999999999999
Q ss_pred CCCCCCC--------------------------------------CCCcCCCCCCCCCCCHHHHHHHHHHcCCChhhhHH
Q 016327 212 DVSGPEQ--------------------------------------CPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVA 253 (391)
Q Consensus 212 Da~~s~~--------------------------------------~~~~g~LP~~~p~~~~~~l~~~F~r~Gfs~~EmVA 253 (391)
|...+.. ..+ +..|+ |-..+.++++.|+||++|++|.||
T Consensus 185 D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIYVNPEGp-ng~PD--pl~aA~dIRetFaRMaMNDeETVA 261 (730)
T COG0376 185 DVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIYVNPEGP-NGNPD--PLAAARDIRETFARMAMNDEETVA 261 (730)
T ss_pred cCCCCccccccCccccccccccccccccccCchhhheeeeEEeCCCCC-CCCCC--hhhhHHHHHHHHHHhcCCcHhhhh
Confidence 9988765 111 23455 556788899999999999999999
Q ss_pred hc-ccccccccCCCCC-CCCCCCCc----------ccc-----CCCCC--CC-CCCccccccccchHHHHHHhhcc----
Q 016327 254 LS-GAHTVGRSRPERS-GWGKPETK----------YTK-----DGPGA--PG-GQSWTVQWLKFDNSYFKDIKERR---- 309 (391)
Q Consensus 254 Ls-GAHTIG~~h~~~s-g~~~pd~~----------~~~-----~cP~~--~g-~~~~~~tp~~FDN~Yyk~ll~~~---- 309 (391)
|+ ||||+|++|-... ....|||. +.. .++.. .| +..|+.+|++|||+||.+|+...
T Consensus 262 LiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWelt 341 (730)
T COG0376 262 LIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELT 341 (730)
T ss_pred hhhcccccccccCCCchhhcCCCccccchhhhccccccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeee
Confidence 99 7999999995421 01112221 111 11211 11 56899999999999999998621
Q ss_pred ------------C---------------CCcccccccccccCCcchHHHHHHHhhCHHHHHHHHHHHHHHHHcCCC
Q 016327 310 ------------D---------------EDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGA 358 (391)
Q Consensus 310 ------------g---------------~~~llL~SD~~L~~D~~t~~~V~~yA~dq~~F~~dFa~Am~KMs~lgv 358 (391)
. ..++||.+|.+|..||.++++.+.|.+|++.|.+.|++||-||.+-+.
T Consensus 342 ksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRDM 417 (730)
T COG0376 342 KSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRDM 417 (730)
T ss_pred cCCCccccccccCccccCCCCCCCcccccCceeeccchhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhccC
Confidence 0 258899999999999999999999999999999999999999988543
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.76 E-value=5.6e-18 Score=174.12 Aligned_cols=222 Identities=28% Similarity=0.407 Sum_probs=169.5
Q ss_pred HHHcCCchhhHHHHhhhcccccCCCCCCCCCCCCCCc-eeechhhhcccccc--CcHHHHHHHHHHHHhCC-CCCHHHHH
Q 016327 113 LLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANA-SLRFEVELKHAANA--GLVNALKLIQPIKDKYS-GVTYADLF 188 (391)
Q Consensus 113 ~l~~~~~ap~llRLaFHD~~t~d~~~~~~~~~GG~dg-SI~~~~E~~~~~N~--gL~~~~~~l~~iK~~~~-~VS~ADli 188 (391)
++.++-....+|-.+|-.+.||.-.+ ++||+|| .||+.|.++|+.|. -|.+.+.+|+.|.+.+. .||.||||
T Consensus 458 IlasgLsvs~lVstAWaSAsTfRgsD----kRGGaNGaRirLaPqkdWevN~P~~l~kvl~~le~iq~~fnkkvSlADlI 533 (730)
T COG0376 458 ILASGLSVSQLVSTAWASASTFRGSD----KRGGANGARIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFNKKVSLADLI 533 (730)
T ss_pred HHHccCCHHHHHHHHHHhhhhccCCc----ccCCcCcceEeecccccCCCCCHHHHHHHHHHHHHHHHHhcCccchhHhe
Confidence 45667778999999999999999775 6899998 99999999999994 67788999999999986 59999999
Q ss_pred HHhhhhhhhhc---CCC--cccCCCCCCCCCCCCCCCCcCCC---CCC----------CCCCCHHHHHHHHHHcCCChhh
Q 016327 189 QLASATAIEEA---GGP--KIPMKYGRVDVSGPEQCPEEGRL---PAA----------GPPSPAEHLRNVFYRMGLNDKE 250 (391)
Q Consensus 189 alAa~~AV~~~---GGP--~i~v~~GR~Da~~s~~~~~~g~L---P~~----------~p~~~~~~l~~~F~r~Gfs~~E 250 (391)
+|+|..|||.+ +|- .+||.+||.|++.. +++++..- |-. ..-.+.+-|++.-+-++|+.-|
T Consensus 534 VL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qe-qtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkAqlL~Ltape 612 (730)
T COG0376 534 VLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQE-QTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKAQLLTLTAPE 612 (730)
T ss_pred eecchHHHHHHHHhcCceeeeccCCCCcccchh-hcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHHHHhccCCcc
Confidence 99999999987 453 57889999998643 44443221 211 1122344578888889999999
Q ss_pred hHHhccccc-ccccCCCCCCCCCCCCccccCCCCCCCCCCccccccccchHHHHHHhhc-------------------cC
Q 016327 251 IVALSGAHT-VGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKER-------------------RD 310 (391)
Q Consensus 251 mVALsGAHT-IG~~h~~~sg~~~pd~~~~~~cP~~~g~~~~~~tp~~FDN~Yyk~ll~~-------------------~g 310 (391)
|++|+||-- +|.-+.. +.. .-||..|....|.||.||++- +.
T Consensus 613 mtVLiGGlRvLg~n~g~-s~~-----------------GVfT~~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~Drkt 674 (730)
T COG0376 613 MTVLIGGLRVLGANYGG-SKH-----------------GVFTDRPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKT 674 (730)
T ss_pred ceEEEcceEeeccCCCC-Ccc-----------------ceeccCcccccchhhhhhhhccceeeeccccccceecccccc
Confidence 999998753 4432211 000 125556778889999998861 11
Q ss_pred CCccc--ccccccccCCcchHHHHHHHhhC--HHHHHHHHHHHHHHHHcCC
Q 016327 311 EDLLV--LPTDAVLFEDPSFKVYAEKYAED--QEAFFKDYAEAHAKLSNLG 357 (391)
Q Consensus 311 ~~~ll--L~SD~~L~~D~~t~~~V~~yA~d--q~~F~~dFa~Am~KMs~lg 357 (391)
+.+-+ ...|..+-+++..|.+++.||.| ++.|.+||..||.|.+++.
T Consensus 675 G~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 675 GEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred CceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 23333 35577777899999999999986 7899999999999999985
No 19
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=93.13 E-value=0.07 Score=43.44 Aligned_cols=43 Identities=26% Similarity=0.349 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceecCC---CCCc-cccccccCCCcc
Q 016327 341 AFFKDYAEAHAKLSNLGAKFDPPEGIVLDDG---AAPE-KFVAAKYSSGKV 387 (391)
Q Consensus 341 ~F~~dFa~Am~KMs~lgv~~~~~~~i~l~c~---~~~~-~~~~~~~~~~~~ 387 (391)
.....|..||.||+.||. +..-.+||+ +.|. .+..+.|+.||.
T Consensus 2 ~m~~~F~~am~KlavLG~----d~~~LiDCSdVIP~p~p~~~~a~fPAg~~ 48 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGH----DRSDLIDCSDVIPVPKPLTGKAHFPAGKS 48 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-----GGGSEE-GGGS----S-SSSSEBGTT--
T ss_pred hHHHHHHHHHHHHHHhcC----ChhhcccchhhccCCCCCCCCcccCCCCC
Confidence 356899999999999996 566788999 5554 334788999884
No 20
>PTZ00411 transaldolase-like protein; Provisional
Probab=34.67 E-value=32 Score=35.14 Aligned_cols=66 Identities=24% Similarity=0.266 Sum_probs=38.4
Q ss_pred hhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCC-CCCHHHHHHHHHHcCC----------ChhhhHHhcccccc
Q 016327 195 AIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGP-PSPAEHLRNVFYRMGL----------NDKEIVALSGAHTV 260 (391)
Q Consensus 195 AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p-~~~~~~l~~~F~r~Gf----------s~~EmVALsGAHTI 260 (391)
+...+|-..|..++||.|.+.-.........+...| -..+.++.+.|++.|+ +..|+..|.|+|.+
T Consensus 176 aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 176 ACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred HHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 334458888999999997653221111111111000 1235556677888886 45788888899854
No 21
>PRK12346 transaldolase A; Provisional
Probab=34.07 E-value=30 Score=35.14 Aligned_cols=92 Identities=20% Similarity=0.292 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhCCCCCHHH--HHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCCC-CCCHHHHHHHHHH
Q 016327 167 NALKLIQPIKDKYSGVTYAD--LFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGP-PSPAEHLRNVFYR 243 (391)
Q Consensus 167 ~~~~~l~~iK~~~~~VS~AD--lialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~p-~~~~~~l~~~F~r 243 (391)
.|+..++.+++. +|+|-= ++.++-+.+...+|-..|..++||.|.......+....-+...| -..+.++.+.|++
T Consensus 137 eGi~A~~~L~~~--GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~ 214 (316)
T PRK12346 137 EGIRAAEELEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQ 214 (316)
T ss_pred HHHHHHHHHHHC--CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHHHH
Confidence 345555555443 333322 22233334445568889999999998753221111111111001 1235567777888
Q ss_pred cCC----------ChhhhHHhcccccc
Q 016327 244 MGL----------NDKEIVALSGAHTV 260 (391)
Q Consensus 244 ~Gf----------s~~EmVALsGAHTI 260 (391)
.|+ +..|+.+|.|+|.+
T Consensus 215 ~~~~T~Vm~ASfRn~~qi~alaG~d~l 241 (316)
T PRK12346 215 HRYETIVMGASFRRTEQILALAGCDRL 241 (316)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCCEE
Confidence 775 45788888888854
No 22
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=21.89 E-value=60 Score=32.90 Aligned_cols=90 Identities=21% Similarity=0.299 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhCCCCCHHH--HHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCC-CC-CCCCHHHHHHHHH
Q 016327 167 NALKLIQPIKDKYSGVTYAD--LFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPA-AG-PPSPAEHLRNVFY 242 (391)
Q Consensus 167 ~~~~~l~~iK~~~~~VS~AD--lialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~-~~-p~~~~~~l~~~F~ 242 (391)
.|+..++.+++. +|.|-= ++.++-+.+...+|-..|..++||.|-..-...... ..+. .. .-..+.++.+.|+
T Consensus 136 eGi~A~~~L~~~--GI~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~-~~~~~~d~Gv~~v~~i~~~~~ 212 (313)
T cd00957 136 EGIQAAKQLEKE--GIHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGDK-AYTAEEDPGVASVKKIYNYYK 212 (313)
T ss_pred HHHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhccccc-cCCccCCcHHHHHHHHHHHHH
Confidence 355555555543 333322 222222233344577889999999986522110000 0111 00 1123556677788
Q ss_pred HcCCC----------hhhhHHhccccc
Q 016327 243 RMGLN----------DKEIVALSGAHT 259 (391)
Q Consensus 243 r~Gfs----------~~EmVALsGAHT 259 (391)
+.|+. ..|+.+|.|+|.
T Consensus 213 ~~~~~T~vmaASfRn~~~v~~laG~d~ 239 (313)
T cd00957 213 KFGYKTKVMGASFRNIGQILALAGCDY 239 (313)
T ss_pred HcCCCcEEEecccCCHHHHHHHhCCCe
Confidence 88874 466777778773
No 23
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=21.84 E-value=1.1e+02 Score=32.02 Aligned_cols=91 Identities=24% Similarity=0.343 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhCCCCCHHH--HHHHhhhhhhhhcCCCcccCCCCCCCCCCCCCCCCcCCCCCCC-C-CCCHHHHHHHHH
Q 016327 167 NALKLIQPIKDKYSGVTYAD--LFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAG-P-PSPAEHLRNVFY 242 (391)
Q Consensus 167 ~~~~~l~~iK~~~~~VS~AD--lialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~~~~g~LP~~~-p-~~~~~~l~~~F~ 242 (391)
.|+..++.+++. +|.|-= ++.++=+.+...+|-..|..++||.|.+.-..... ..+|... | -..+.++.+.|+
T Consensus 142 eGi~A~~~L~~~--GI~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g~-~~~~~~~dpGv~~v~~i~~~~~ 218 (391)
T PRK12309 142 EGIKAAEVLEKE--GIHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETGR-DSYPGAEDPGVQSVTQIYNYYK 218 (391)
T ss_pred HHHHHHHHHHHC--CCceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccCC-CccccccchHHHHHHHHHHHHH
Confidence 355555555443 333222 22222233334458889999999998743221111 1133210 1 112555667777
Q ss_pred HcCC----------ChhhhHHhcccccc
Q 016327 243 RMGL----------NDKEIVALSGAHTV 260 (391)
Q Consensus 243 r~Gf----------s~~EmVALsGAHTI 260 (391)
+.|+ +..|+..|.|+|.+
T Consensus 219 ~~~~~T~Im~ASfRn~~~v~~laG~d~~ 246 (391)
T PRK12309 219 KFGYKTEVMGASFRNIGEIIELAGCDLL 246 (391)
T ss_pred hcCCCcEEEecccCCHHHHHHHHCCCee
Confidence 7775 45677788888854
Done!